Summer Fallowinng Improves Survival and Growth of Cottonwood on Old Fields

Treesearch

James B. Baker; B. G. Blackmon

1973-01-01

Fallowing an old-field site during the summer prior to planting and applying a herbicide in September improved survival and growth of eastern cottonwood cuttings. Summer fallowing without applying herbicide also improved height growth of cottonwood through age 2. Deep plowing and cover cropping, alone or in combination, did not influence growth or survival during the...

Assessing Farmer Innovations in Agroforestry in Eastern Zambia

ERIC Educational Resources Information Center

Katanga, R.; Kabwe, G.; Kuntashula, E.; Mafongoya, P. L.; Phiri, S.

2007-01-01

This paper describes farmer innovations on improved fallows developed by researchers to replenish soil fertility. The reasons for the innovations and how these innovations are facilitating wide adoption of improved fallows are discussed. Research designed trial results to evaluate the ecological robustness of these innovations are also analyzed in…

Alternatives to preplant soil fumigation for Western forest nurseries.

Treesearch

Diane M. Hildebrand; Jeffrey K. Stone; Robert L. James; Susan J. Frankel

2004-01-01

Field trials at six bare-root forest tree nurseries in the Western United States compared cultural treatments including timing and depth of sowing; bare fallow (with and without periodic tilling); organic amendments including sawdust, composts, and cover crops; mulches including pine needles, sawdust, and rice straw; and fumigation with methyl bromide/chloropicrin or...

Improvement of red pepper yield and soil environment by summer catch aquatic crops in greenhouses

NASA Astrophysics Data System (ADS)

Du, X. F.; Wang, L. Z.; Peng, J.; Wang, G. L.; Guo, X. S.; Wen, T. G.; Gu, D. L.; Wang, W. Z.; Wu, C. W.

2016-08-01

To investigate effects of the rotation of summer catch crops on remediation retrogressed soils in continuous cropping, a field experiment was conducted. Rice, water spinach, or cress were selected as summer catch crops; bare fallow during summer fallow was used as the control group. Results showed that aquatic crops grown in summer fallow period could effectively reduce soil bulk density and pH, facilitate soil nutrient release, and improve soil physical and chemical properties compared with those grown in fallow period. Paddy-upland rotation could improve soil microbial members and increase bacterial and actinomycete populations; by contrast, paddy-upland rotation could reduce fungal populations and enhance bacterium-to-fungus ratio. Paddy-upland rotation could also actively promote activities of soil enzymes, such as urease, phosphatase, invertase, and catalase. The proposed paddy-upland rotation significantly affected the growth of red pepper; the yield and quality of the grown red pepper were enhanced. Summer catch crops, such as rice, water spinach, and cress significantly increased pepper yield in the following growing season by 15.4%, 10.2% and 14.0%, respectively, compared with those grown in fallow treatment. Therefore, the proposed paddy-upland crop rotation could be a useful method to alleviate continuous cropping problems involved in cultivating red pepper in greenhouses.

Drought Impacts on Agricultural Production and Land Fallowing in California's Central Valley in 2015

NASA Technical Reports Server (NTRS)

Rosevelt, Carolyn; Melton, Forrest S.; Johnson, Lee; Guzman, Alberto; Verdin, James P.; Thenkabail, Prasad S.; Mueller, Rick; Jones, Jeanine; Willis, Patrick

2016-01-01

The ongoing drought in California substantially reduced surface water supplies for millions of acres of irrigated farmland in California's Central Valley. Rapid assessment of drought impacts on agricultural production can aid water managers in assessing mitigation options, and guide decision making with respect to mitigation of drought impacts. Satellite remote sensing offers an efficient way to provide quantitative assessments of drought impacts on agricultural production and increases in fallow acreage associated with reductions in water supply. A key advantage of satellite-based assessments is that they can provide a measure of land fallowing that is consistent across both space and time. We describe an approach for monthly and seasonal mapping of uncultivated agricultural acreage developed as part of a joint effort by USGS, USDA, NASA, and the California Department of Water Resources to provide timely assessments of land fallowing during drought events. This effort has used the Central Valley of California as a pilot region for development and testing of an operational approach. To provide quantitative measures of uncultivated agricultural acreage from satellite data early in the season, we developed a decision tree algorithm and applied it to time-series data from Landsat TM (Thematic Mapper), ETM+ (Enhanced Thematic Mapper Plus), OLI (Operational Land Imager), and MODIS (Moderate Resolution Imaging Spectroradiometer). Our effort has been focused on development of indicators of drought impacts in the March-August timeframe based on measures of crop development patterns relative to a reference period with average or above average rainfall. To assess the accuracy of the algorithms, monthly ground validation surveys were conducted across 650 fields from March-September in 2014 and 2015. We present the algorithm along with updated results from the accuracy assessment, and data and maps of land fallowing in the Central Valley in 2015.

Drought Impacts on Agricultural Production and Land Fallowing in California's Central Valley in 2015

NASA Astrophysics Data System (ADS)

Rosevelt, C.; Melton, F. S.; Johnson, L.; Guzman, A.; Verdin, J. P.; Thenkabail, P. S.; Mueller, R.; Jones, J.; Willis, P.

2015-12-01

The ongoing drought in California substantially reduced surface water supplies for millions of acres of irrigated farmland in California's Central Valley. Rapid assessment of drought impacts on agricultural production can aid water managers in assessing mitigation options, and guide decision making with respect to mitigation of drought impacts. Satellite remote sensing offers an efficient way to provide quantitative assessments of drought impacts on agricultural production and increases in fallow acreage associated with reductions in water supply. A key advantage of satellite-based assessments is that they can provide a measure of land fallowing that is consistent across both space and time. We describe an approach for monthly and seasonal mapping of uncultivated agricultural acreage developed as part of a joint effort by USGS, USDA, NASA, and the California Department of Water Resources to provide timely assessments of land fallowing during drought events. This effort has used the Central Valley of California as a pilot region for development and testing of an operational approach. To provide quantitative measures of uncultivated agricultural acreage from satellite data early in the season, we developed a decision tree algorithm and applied it to timeseries of data from Landsat TM, ETM+, OLI, and MODIS. Our effort has been focused on development of indicators of drought impacts in the March - August timeframe based on measures of crop development patterns relative to a reference period with average or above average rainfall. To assess the accuracy of the algorithms, monthly ground validation surveys were conducted across 650 fields from March - September in 2014 and 2015. We present the algorithm along with updated results from the accuracy assessment, and data and maps of land fallowing in the Central Valley in 2015.

Practicalities of methodologies in monitoring morest degradation in the tropics

Treesearch

Yoshiyuki Kiyono

2013-01-01

Conversion of natural forest to agricultural land is one of the most important forms of land-use change affecting both carbon stock and biodiversity. When the agricultural land contains trees, e.g. fallow-land forest of slash-and-burn agriculture, the conversion can be categorized into forest degradation when the forest definition covers such vegetation. One practical...

[Effects of deep plowing and mulch in fallow period on soil water and yield of wheat in dryland].

PubMed

Deng, Yan; Gao, Zhi-Qiang; Sun, Min; Zhao, Wei-Feng; Zhao, Hong-Mei; Li, Qing

2014-01-01

A field test was carried out in Qiujialing Village, Wenxi, Shanxi from 2009 to 2011 to study the soil water movement of 0-300 cm layer, yield formation and water use efficiency (WUE) of wheat with deep plowing and mulching the whole ground immediately (no mulch as control) 15 days and 45 days after harvest. The results indicated that deep plowing and mulch in fallow period could improve soil water storage of the 100-180 cm layer before sowing, the soil water storage efficiency in fallow period, and soil water storage from pre-wintering stage to booting stage. Compared with deep plowing 15 days after wheat harvest, deep plowing 45 days after wheat harvest did better in improving soil water storage and water use efficiency, as well as ear number and yield, which was more conducive in the year with more precipitation. Generally, deep plowing and mulching after raining during fallow period could benefit the soil water storage and conservation, thus would be helpful to improve wheat yield in dryland.

How to improve fertility of African soils? Leguminous fallows (Cameroon), addition of farmyard manure and mineral fertilizer (Kenya), organic residues management and introduction of N2 fixing species in forest plantations (Congo).

NASA Astrophysics Data System (ADS)

Koutika, Lydie-Stella; Mareschal, Louis; Mouanda, Cadeau; Epron, Daniel

2014-05-01

Most of African soils are inherently infertile and poor in nutrients mainly nitrogen and phosphorus. Several practices are used to improve soil fertility, increase productivity and ensure their sustainability. Soil fertility in the leguminous fallows was evaluated through particulate organic matter (POM), the more active part of soil organic matter (SOM) in Cameroon. The combination of mineral and organic (manure) fertilizers increased microbial P biomass allowing the release of P along the plant growing period in the Kenyan soils. Organic residues management and introduction of nitrogen fixing species (Acacia) were used to improve soil fertility and sustain forest productivity on the coastal plains of Congo. SOM fractionation was made under Pueraria, Mucuna fallows and natural regrowth mainly Chromolaena and under 3 forest plantation treatments installed in previous savanna: 1) no input, 2) normal input, and 3) double input of organic residues. Microbial P biomass and sequential P fractionation were evaluated in high and low P fixing soils. N, C, available P and pH were determined on soil sampled in acacia (100A), eucalypt (100E) and mixed-species (50A:50E) stands. N and P were determined in aboveground litters and in leaves, bark and wood of trees. The two leguminous fallows increased N content in POM fractions i.e., N >1% for Pueraria and Mucuna against N<1% for natural regrowth in the 0-0.10m depth, probably through N input from N2 fixation from the atmosphere (Cameroon).The addition of mineral fertilizers and farmyard manure increases P biomass (4.8 after 2 weeks to 15.2 after 16 weeks), and then decreased to 9.7 mg P g-1 soil (week 32). It also changes the P Hedley fractions partition in the high P fixing Kenyan soil (0-0.10m). After two rotations (14 years), SOM mineralization was the highest in the double input of organic residues treatment (low coarse POM 5.6 g kg-1 of soil and high organo-mineral fraction (OMF) 115 g kg-1 of soil). The introduction of A. mangium in eucalypt plantations increased the soil N concentration under the mixed-species stand (N>0.06%) compared to under the pure eucalypt stand (N<0.05%) in the 0-0.05 m, along with an increase in soil C concentration (C>1% in the mixed stand and C< 0.9 in the pure Eucalyptus stand).

Influence of soil management on water erosion and hydrological responses in semiarid agrosystems

NASA Astrophysics Data System (ADS)

De Alba, Saturnino; Alcazar, María; Ivón Cermeño, F.

2014-05-01

In Europe, in the Mediterranean area, water erosion is very severe, moderately to seriously affecting 50% to 70% of the agricultural land. However, it is remarkable the lack of field data of water erosion rates for agricultural areas of semiarid Mediterranean climate. Moreover, this lack of field data is even more severe regarding the hydrological and erosive responses of soils managed with organic farming compared to those with conventional managements or others under conservation agriculture. This paper describes an experimental field station (La Higueruela Station) for the continuous monitoring of water erosion that was set up in 1992 in Central Spain (Toledo, Castilla-La Mancha). In the study area, the annual precipitation is around 450 mm with a very irregular inter-annual and seasonal distribution, which includes a strong drought in summer. The geology is characterised by non-consolidated Miocene materials, mostly arcosics. The area presents a low relief and gentle slopes, generally less than 15%. At the experimental field, the soil is a Typic Haploxeralf (USDA, 1990). The land-uses are rainfed crops mainly herbaceous crops, vineyard and olive trees. The hydrological response and soil losses by water erosion under natural rainfall conditions are monitored in a total of 28 experimental plots of the USLE type. The plots have a total area of 33.7 m2, (22.5 m long downslope and 3 m wide) and presented a slope gradient of 9%. Detailed descriptions of the experimental field facilities and the automatic station for monitoring runoff and sediment productions, as well as of the meteorological station, are presented. The land uses and treatments applied on the experimental plots are for different soil management systems for cereals crops (barley): 1) Organic farming, 2) Minimum tillage of moderate tillage intensity, 3) No-tillage, and 4) Conventional tillage; five alternatives of fallow: 1) Traditional fallow (white fallow) with conventional tillage, 2) Traditional fallow (white fallow) with minimum tillage, 3) Organic fallow (Green fallow), 4) Delayed fallow, and 5) Chemical fallow with a no-tillage management. Additionally, there is an experimental plot presenting a simulation of abandonment and natural re-vegetation. This paper presents the main results, for a data series of 20 years (1993-2013) with special attention to the organic farming management results, regarding to the following research objectives: 1) Monitoring the hydrological and erosive responses of the different management systems; 2) Study of the role of key factors in soil erodibility affected by the management as soil physics and chemistry, surface cover and roughness, and soil and surface initial conditions (soil water content, surface roughness…); and, 3) Characterizing the seasonal variability of the rainfall erosivity.

[Effects of strip planting and fallow rotation on the soil and water loss and water use efficiency of slope farmland].

PubMed

Hou, Xian-Qing; Li, Rong; Han, Qing-Fang; Jia, Zhi-Kuan; Wang, Wei; Yan, Bo; Yang, Bao-Ping

2012-08-01

In order to enhance the soil water-retaining capacity of slope farmland and reduce its soil and water loss, a field study was conducted in 2007-2010 to examine the effects of strip planting and fallow rotation on the soil water regime, soil and water loss characteristics, and water use efficiency of a 10 degrees-15 degrees slope farmland in the arid area of southern Ningxia, Northwest China. Compared with the traditional no-strip planting, strip planting and fallow rotation increased the soil water content in 0-200 cm layer significantly, with an increment of 4.9% -7.0%. Strip planting and fallow rotation pattern could also effectively conserve the soil water in rain season, and obviously improve the soil water regime at crops early growth stages. As compared to no-strip planting, strip planting and fallow rotation increased the soil water content in 0-200 cm layer by 5.4%-8.5%, decreased the surface runoff by 0.7-3.2 m3 x hm(-2), sediment runoff by 0.2-1.9 t x hm(-2), and soil total N loss by 42.1% -73.3%, while improved the crop water use efficiency by 6.1% -24.9% and the precipitation use efficiency by 6.3% -15.3%.

Afforestation by natural regeneration or by tree planting: examples of opposite hydrological impacts evidenced by long-term field monitoring in the humid tropics

NASA Astrophysics Data System (ADS)

Lacombe, G.; Ribolzi, O.; de Rouw, A.; Pierret, A.; Latsachak, K.; Silvera, N.; Pham Dinh, R.; Orange, D.; Janeau, J.-L.; Soulileuth, B.; Robain, H.; Taccoen, A.; Sengphaathith, P.; Mouche, E.; Sengtaheuanghoung, O.; Tran Duc, T.; Valentin, C.

2015-12-01

The humid tropics are exposed to an unprecedented modernization of agriculture involving rapid and highly-mixed land-use changes with contrasted environmental impacts. Afforestation is often mentioned as an unambiguous solution for restoring ecosystem services and enhancing biodiversity. One consequence of afforestation is the alteration of streamflow variability controlling habitats, water resources and flood risks. We demonstrate that afforestation by tree planting or by natural forest regeneration can induce opposite hydrological changes. An observatory including long-term field measurements of fine-scale land-use mosaics and of hydro-meteorological variables has been operating in several headwater catchments in tropical Southeast Asia since 2001. The GR2M water balance model repeatedly calibrated over successive 1 year periods, and used in simulation mode with specific rainfall input, allowed the hydrological effect of land-use change to be isolated from that of rainfall variability in two of these catchments in Laos and Vietnam. Visual inspection of hydrographs, correlation analyses and trend detection tests allowed causality between land-use changes and changes in seasonal flows to be ascertained. In Laos, the combination of shifting cultivation system (alternation of rice and fallow) and the gradual increase of teak tree plantations replacing fallow, led to intricate flow patterns: pluri-annual flow cycles induced by the shifting system, on top of a gradual flow increase over years caused by the spread of the plantation. In Vietnam, the abandonment of continuously cropped areas mixed with patches of tree plantations led to the natural re-growth of forest communities followed by a gradual drop in streamflow. Soil infiltrability controlled by surface crusting is the predominant process explaining why two modes of afforestation (natural regeneration or planting) led to opposite changes in flow regime. Given that commercial tree plantations will continue to expand in the humid tropics, careful consideration is needed before attributing to them positive effects on water and soil conservation.

Tropical secondary forests regenerating after shifting cultivation in the Philippines uplands are important carbon sinks.

PubMed

Mukul, Sharif A; Herbohn, John; Firn, Jennifer

2016-03-08

In the tropics, shifting cultivation has long been attributed to large scale forest degradation, and remains a major source of uncertainty in forest carbon accounting. In the Philippines, shifting cultivation, locally known as kaingin, is a major land-use in upland areas. We measured the distribution and recovery of aboveground biomass carbon along a fallow gradient in post-kaingin secondary forests in an upland area in the Philippines. We found significantly higher carbon in the aboveground total biomass and living woody biomass in old-growth forest, while coarse dead wood biomass carbon was higher in the new fallow sites. For young through to the oldest fallow secondary forests, there was a progressive recovery of biomass carbon evident. Multivariate analysis indicates patch size as an influential factor in explaining the variation in biomass carbon recovery in secondary forests after shifting cultivation. Our study indicates secondary forests after shifting cultivation are substantial carbon sinks and that this capacity to store carbon increases with abandonment age. Large trees contribute most to aboveground biomass. A better understanding of the relative contribution of different biomass sources in aboveground total forest biomass, however, is necessary to fully capture the value of such landscapes from forest management, restoration and conservation perspectives.

Correlation between soil physicochemical properties and vegetation parameters in secondary tropical forest in Sabal, Sarawak, Malaysia

NASA Astrophysics Data System (ADS)

Karyati, K.; Ipor, I. B.; Jusoh, I.; Wasli, M. E.

2018-04-01

The tree growth is influenced by soil morphological and physicochemical properties in the site. The purpose of this study was to describe correlation between soil properties under various stage secondary forests and vegetation parameters, such as floristic structure parameters and floristic diversity indices. The vegetation surveys were conducted in 5, 10, and 20 years old at secondary tropical forests in Sarawak, Malaysia. Nine sub plots sized 20 m × 20 m were established within each study site. The Pearson analysis showed that soil physicochemical properties were significantly correlated to floristic structure parameters and floristic diversity indices. The result of PCA clarified the correlation among most important soil properties, floristic structure parameters, and floristic diversity indices. The PC1 represented cation retention capacity and soil texture which were little affected by the fallow age and its also were correlated by floristic structure and diversity. The PC2 was linked to the levels of soil acidity. This property reflected the remnant effects of ash addition and fallow duration, and the significant correlation were showed among pH (H2O), floristic structure and diversity. The PC3 represented the soil compactness. The soil hardness could be influenced by fallow period and it was also correlated by floristic structure.

Tropical secondary forests regenerating after shifting cultivation in the Philippines uplands are important carbon sinks

PubMed Central

Mukul, Sharif A.; Herbohn, John; Firn, Jennifer

2016-01-01

In the tropics, shifting cultivation has long been attributed to large scale forest degradation, and remains a major source of uncertainty in forest carbon accounting. In the Philippines, shifting cultivation, locally known as kaingin, is a major land-use in upland areas. We measured the distribution and recovery of aboveground biomass carbon along a fallow gradient in post-kaingin secondary forests in an upland area in the Philippines. We found significantly higher carbon in the aboveground total biomass and living woody biomass in old-growth forest, while coarse dead wood biomass carbon was higher in the new fallow sites. For young through to the oldest fallow secondary forests, there was a progressive recovery of biomass carbon evident. Multivariate analysis indicates patch size as an influential factor in explaining the variation in biomass carbon recovery in secondary forests after shifting cultivation. Our study indicates secondary forests after shifting cultivation are substantial carbon sinks and that this capacity to store carbon increases with abandonment age. Large trees contribute most to aboveground biomass. A better understanding of the relative contribution of different biomass sources in aboveground total forest biomass, however, is necessary to fully capture the value of such landscapes from forest management, restoration and conservation perspectives. PMID:26951761

Tropical secondary forests regenerating after shifting cultivation in the Philippines uplands are important carbon sinks

NASA Astrophysics Data System (ADS)

Mukul, Sharif A.; Herbohn, John; Firn, Jennifer

2016-03-01

In the tropics, shifting cultivation has long been attributed to large scale forest degradation, and remains a major source of uncertainty in forest carbon accounting. In the Philippines, shifting cultivation, locally known as kaingin, is a major land-use in upland areas. We measured the distribution and recovery of aboveground biomass carbon along a fallow gradient in post-kaingin secondary forests in an upland area in the Philippines. We found significantly higher carbon in the aboveground total biomass and living woody biomass in old-growth forest, while coarse dead wood biomass carbon was higher in the new fallow sites. For young through to the oldest fallow secondary forests, there was a progressive recovery of biomass carbon evident. Multivariate analysis indicates patch size as an influential factor in explaining the variation in biomass carbon recovery in secondary forests after shifting cultivation. Our study indicates secondary forests after shifting cultivation are substantial carbon sinks and that this capacity to store carbon increases with abandonment age. Large trees contribute most to aboveground biomass. A better understanding of the relative contribution of different biomass sources in aboveground total forest biomass, however, is necessary to fully capture the value of such landscapes from forest management, restoration and conservation perspectives.

Effects of ecological and conventional agricultural intensification practices on maize yields in sub-Saharan Africa under potential climate change

NASA Astrophysics Data System (ADS)

Folberth, Christian; Yang, Hong; Gaiser, Thomas; Liu, Junguo; Wang, Xiuying; Williams, Jimmy; Schulin, Rainer

2014-04-01

Much of Africa is among the world’s regions with lowest yields in staple food crops, and climate change is expected to make it more difficult to catch up in crop production in particular in the long run. Various agronomic measures have been proposed for lifting agricultural production in Africa and to adapt it to climate change. Here, we present a projection of potential climate change impacts on maize yields under different intensification options in Sub-Saharan Africa (SSA) using an agronomic model, GIS-based EPIC (GEPIC). Fallow and nutrient management options taken into account are (a) conventional intensification with high mineral N supply and a bare fallow, (b) moderate mineral N supply and cowpea rotation, and (c) moderate mineral N supply and rotation with a fast growing N fixing tree Sesbania sesban. The simulations suggest that until the 2040s rotation with Sesbania will lead to an increase in yields due to increasing N supply besides improving water infiltration and soils’ water holding capacity. Intensive cultivation with a bare fallow or an herbaceous crop like cowpea in the rotation is predicted to result in lower yields and increased soil erosion during the same time span. However, yields are projected to decrease in all management scenarios towards the end of the century, should temperature increase beyond critical thresholds. The results suggest that the effect of eco-intensification as a sole means of adapting agriculture to climate change is limited in Sub-Saharan Africa. Highly adverse temperatures would rather have to be faced by improved heat tolerant cultivars, while strongly adverse decreases in precipitation would have to be faced by expanding irrigation where feasible. While the evaluation of changes in agro-environmental variables like soil organic carbon, erosion, and soil humidity hints that these are major factors influencing climate change resilience of the field crop, no direct relationship between these factors, crop yields, and changes in climate variables could be identified. This will need further detailed studies at the field and regional scale.

Impacts of long-term no-tillage and conventional tillage management of spring wheat-lentil cropping systems in dryland Eastern Montana, USA, on fungi associated to soil aggregation

USDA-ARS?s Scientific Manuscript database

Lentil (Lens culinaris Medikus CV. Indianhead) used to replace fallow in spring-wheat (Triticum aestivum) rotation in the semi-arid Eastern Montana USA, may improve soil quality. We evaluate the 14 years influence of continuous wheat under no-tillage (WNT), fallow-wheat under conventional tillage (F...

An Efficient and Examinable Illegal Fallow Fields Detecting Method with Spatio-Temporal Information Integration

NASA Astrophysics Data System (ADS)

Chang, Chia-Hao; Chu, Tzu-How

2017-04-01

To control the rice production and farm usage in Taiwan, Agriculture and Food Agency (AFA) has published a series of policies to subsidize farmers to plant different crops or to practice fallow science 1983. Because of no efficient and examinable mechanism to verify the fallow fields surveyed by township office, illegal fallow fields were still repeated each year. In this research, we used remote sensing images, GIS data of Fields, and application records of fallow fields to establish an illegal fallow fields detecting method in Yulin County in central Taiwan. This method included: 1. collected multi-temporal images from FS-2 or SPOT series with 4 time periods; 2. combined the application records and GIS data of fields to verify the location of fallow fields; 3. conducted ground truth survey and classified images with ISODATA and Maximum Likelihood Classification (MLC); 4. defined the land cover type of fallow fields by zonal statistic; 5. verified accuracy with ground truth; 6. developed potential illegal fallow fields survey method and benefit estimation. We use 190 fallow fields with 127 legal and 63 illegal as ground truth and accuracies of illegal fallow field interpretation in producer and user are 71.43% and 38.46%. If township office surveyed 117 classified illegal fallow fields, 45 of 63 illegal fallow fields will be detected. By using our method, township office can save 38.42% of the manpower to detect illegal fallow fields and receive an examinable 71.43% producer accuracy.

Contradictory hydrological impacts of afforestation in the humid tropics evidenced by long-term field monitoring and simulation modelling

NASA Astrophysics Data System (ADS)

Lacombe, Guillaume; Ribolzi, Olivier; de Rouw, Anneke; Pierret, Alain; Latsachak, Keoudone; Silvera, Norbert; Pham Dinh, Rinh; Orange, Didier; Janeau, Jean-Louis; Soulileuth, Bounsamai; Robain, Henri; Taccoen, Adrien; Sengphaathith, Phouthamaly; Mouche, Emmanuel; Sengtaheuanghoung, Oloth; Tran Duc, Toan; Valentin, Christian

2016-07-01

The humid tropics are exposed to an unprecedented modernisation of agriculture involving rapid and mixed land-use changes with contrasted environmental impacts. Afforestation is often mentioned as an unambiguous solution for restoring ecosystem services and enhancing biodiversity. One consequence of afforestation is the alteration of streamflow variability which controls habitats, water resources, and flood risks. We demonstrate that afforestation by tree planting or by natural forest regeneration can induce opposite hydrological changes. An observatory including long-term field measurements of fine-scale land-use mosaics and of hydrometeorological variables has been operating in several headwater catchments in tropical southeast Asia since 2000. The GR2M water balance model, repeatedly calibrated over successive 1-year periods and used in simulation mode with the same year of rainfall input, allowed the hydrological effect of land-use change to be isolated from that of rainfall variability in two of these catchments in Laos and Vietnam. Visual inspection of hydrographs, correlation analyses, and trend detection tests allowed causality between land-use changes and changes in seasonal streamflow to be ascertained. In Laos, the combination of shifting cultivation system (alternation of rice and fallow) and the gradual increase of teak tree plantations replacing fallow led to intricate streamflow patterns: pluri-annual streamflow cycles induced by the shifting system, on top of a gradual streamflow increase over years caused by the spread of the plantations. In Vietnam, the abandonment of continuously cropped areas combined with patches of mix-trees plantations led to the natural re-growth of forest communities followed by a gradual drop in streamflow. Soil infiltrability controlled by surface crusting is the predominant process explaining why two modes of afforestation (natural regeneration vs. planting) led to opposite changes in streamflow regime. Given that commercial tree plantations will continue to expand in the humid tropics, careful consideration is needed before attributing to them positive effects on water and soil conservation.

Linking crop structure, throughfall, soil surface conditions, runoff and soil detachment: 10 land uses analyzed in Northern Laos.

PubMed

Lacombe, Guillaume; Valentin, Christian; Sounyafong, Phabvilay; de Rouw, Anneke; Soulileuth, Bounsamai; Silvera, Norbert; Pierret, Alain; Sengtaheuanghoung, Oloth; Ribolzi, Olivier

2018-03-01

In Montane Southeast Asia, deforestation and unsuitable combinations of crops and agricultural practices degrade soils at an unprecedented rate. Typically, smallholder farmers gain income from "available" land by replacing fallow or secondary forest by perennial crops. We aimed to understand how these practices increase or reduce soil erosion. Ten land uses were monitored in Northern Laos during the 2015 monsoon, using local farmers' fields. Experiments included plots of the conventional system (food crops and fallow), and land uses corresponding to new market opportunities (e.g. commercial tree plantations). Land uses were characterized by measuring plant cover and plant mean height per vegetation layer. Recorded meteorological variables included rainfall intensity, throughfall amount, throughfall kinetic energy (TKE), and raindrop size. Runoff coefficient, soil loss, and the percentage areas of soil surface types (free aggregates and gravel; crusts; macro-faunal, vegetal and pedestal features; plant litter) were derived from observations and measurements in 1-m 2 micro-plots. Relationships between these variables were explored with multiple regression analyses. Our results indicate that TKE induces soil crusting and soil loss. By reducing rainfall infiltration, crusted area enhances runoff, which removes and transports soil particles detached by splash over non-crusted areas. TKE is lower under land uses reducing the velocity of raindrops and/or preventing an increase in their size. Optimal vegetation structures combine minimum height of the lowest layer (to reduce drop velocity at ground level) and maximum coverage (to intercept the largest amount of rainfall), as exemplified by broom grass (Thysanolaena latifolia). In contrast, high canopies with large leaves will increase TKE by enlarging raindrops, as exemplified by teak trees (Tectona grandis), unless a protective understorey exists under the trees. Policies that ban the burning of multi-layered vegetation structure under tree plantations should be enforced. Shade-tolerant shrubs and grasses with potential economic return could be promoted as understorey. Copyright © 2017 Elsevier B.V. All rights reserved.

Soil Water Balance and Water Use Efficiency of Dryland Wheat in Different Precipitation Years in Response to Green Manure Approach

PubMed Central

Zhang, Dabin; Yao, Pengwei; Na, Zhao; Cao, Weidong; Zhang, Suiqi; Li, Yangyang; Gao, Yajun

2016-01-01

Winter wheat (Triticum aestivum L.) monoculture is conventionally cultivated followed by two to three months of summer fallow in the Loess Plateau. To develop a sustainable cropping system, we conducted a six-year field experiment to investigate the effect of leguminous green manure (LGM) instead of bare fallow on the yield and water use efficiency (WUE) of winter wheat and the soil water balance (SWB) in different precipitation years in a semi-arid region of northwest China. Results confirmed that planting LGM crop consumes soil water in the fallow season can bring varied effects to the subsequent wheat. The effect is positive or neutral when the annual precipitation is adequate, so that there is no significant reduction in the soil water supplied to wheat. If this is not the case, the effect is negative. On average, the LGM crop increased wheat yield and WUE by 13% and 28%, respectively, and had considerable potential for maintaining the SWB (0–200 cm) compared with fallow management. In conclusion, cultivation of the LGM crop is a better option than fallow to improve the productivity and WUE of the next crop and maintain the soil water balance in the normal and wet years in the Loess Plateau. PMID:27225842

Amplicon restriction patterns associated with nitrogenase activity of root nodules for selection of superior Myrica seedlings.

PubMed

Yanthan, Mhathung; Misra, Arvind K

2013-11-01

Trees of Myrica sp. grow abundantly in the forests of Meghalaya, India. These trees are actinorhizal and harbour nitrogen-fixing Frankia in their root nodules and contribute positively towards the enhancement of nitrogen status of forest areas. They can be used in rejuvenation of mine spoils and nitrogen-depleted fallow lands generated due to slash and burn agriculture practiced in the area. We have studied the association of amplicon restriction patterns (ARPs) of Myrica ribosomal RNA gene and internal transcribed spacer (ITS) region and nitrogenase activity of its root nodules. We found that ARPs thus obtained could be used as markers for early screening of seedlings that could support strains of Frankia that fix atmospheric nitrogen more efficiently.

Mapping rice-fallow cropland areas for short-season grain legumes intensification in South Asia using MODIS 250 m time-series data

USGS Publications Warehouse

Gumma, Murali Krishna; Thenkabail, Prasad S.; Teluguntla, Pardhasaradhi G.; Rao, Mahesh N.; Mohammed, Irshad A.; Whitbread, Anthony M.

2016-01-01

The goal of this study was to map rainfed and irrigated rice-fallow cropland areas across South Asia, using MODIS 250 m time-series data and identify where the farming system may be intensified by the inclusion of a short-season crop during the fallow period. Rice-fallow cropland areas are those areas where rice is grown during the kharif growing season (June–October), followed by a fallow during the rabi season (November–February). These cropland areas are not suitable for growing rabi-season rice due to their high water needs, but are suitable for a short -season (≤3 months), low water-consuming grain legumes such as chickpea (Cicer arietinum L.), black gram, green gram, and lentils. Intensification (double-cropping) in this manner can improve smallholder farmer’s incomes and soil health via rich nitrogen-fixation legume crops as well as address food security challenges of ballooning populations without having to expand croplands. Several grain legumes, primarily chickpea, are increasingly grown across Asia as a source of income for smallholder farmers and at the same time providing rich and cheap source of protein that can improve the nutritional quality of diets in the region. The suitability of rainfed and irrigated rice-fallow croplands for grain legume cultivation across South Asia were defined by these identifiers: (a) rice crop is grown during the primary (kharif) crop growing season or during the north-west monsoon season (June–October); (b) same croplands are left fallow during the second (rabi) season or during the south-east monsoon season (November–February); and (c) ability to support low water-consuming, short-growing season (≤3 months) grain legumes (chickpea, black gram, green gram, and lentils) during rabi season. Existing irrigated or rainfed crops such as rice or wheat that were grown during kharif were not considered suitable for growing during the rabi season, because the moisture/water demand of these crops is too high. The study established cropland classes based on the every 16-day 250 m normalized difference vegetation index (NDVI) time series for one year (June 2010–May 2011) of Moderate Resolution Imaging Spectroradiometer (MODIS) data, using spectral matching techniques (SMTs), and extensive field knowledge. Map accuracy was evaluated based on independent ground survey data as well as compared with available sub-national level statistics. The producers’ and users’ accuracies of the cropland fallow classes were between 75% and 82%. The overall accuracy and the kappa coefficient estimated for rice classes were 82% and 0.79, respectively. The analysis estimated approximately 22.3 Mha of suitable rice-fallow areas in South Asia, with 88.3% in India, 0.5% in Pakistan, 1.1% in Sri Lanka, 8.7% in Bangladesh, 1.4% in Nepal, and 0.02% in Bhutan. Decision-makers can target these areas for sustainable intensification of short-duration grain legumes.

Fallow land effects on land-atmosphere interactions in California drought

NASA Astrophysics Data System (ADS)

Lu, Y.; Melton, F. S.; Kueppers, L. M.

2015-12-01

The recent drought in California increased the area of fallow land, which is cropland not planted or irrigated per normal agricultural practice. The effects of fallow land on land-atmosphere interactions in drought years are not well studied, but theoretically should alter local energy balance and surface climate relative to normal years, which in turn could affect neighboring cropland. We examined these effects using a regional climate model (Weather Research and Forecasting model) coupled with a dynamic crop growth model (Community Land Model) that has an irrigation scheme to study the effects of fallow land in 2014, an extreme drought year in California. In our study, we used satellite-derived maps of cultivated and fallowed acreage, and defined summer fallow land in 2014 as the reduced percentage of cultivated land for each grid cell relative to the 2011 cultivated area (2011 was the most recent year following a winter with average or above average precipitation). Using a sensitivity experiment that kept large-scale climate boundary conditions constant, we found that fallow land resulted in even dryer and warmer weather that worsened the drought impact. Fallow land increased 2-meter air temperature by 0.1- 4 °C with 0-80% fallow land, mainly due to an increase in nighttime temperature. Fallow land warmed the atmosphere up to 850hpa during the day, and after sunset, the warmed atmosphere emitted downward longwave radiation that prevented the surface from rapidly cooling, and therefore resulted in warmer nights. Fallow land reduced near surface relative humidity by 5-30% and increased vapor pressure deficit by 0.5-2 kPa. These drier conditions increased the irrigation water demand in the nearby cropland: crops required 1-25% more irrigation with 10-80% fallow land within the same 10km grid cell. Our study suggests that fallow land has large impacts on land-atmosphere interactions and increases irrigation requirements in nearby cropland.

Precipitation Storage Efficiency During Fallow in Wheat-Fallow Systems

USDA-ARS?s Scientific Manuscript database

Wheat-fallow production systems arose in order to stabilize widely ranging wheat yields that resulted from highly variable precipitation in the Great Plains. Historically, precipitation storage efficiency (PSE) over the fallow period increased over time as inversion tillage systems used for weed con...

Cultural control of larval mosquito production in a fallow citrus grove used for disposal of secondary-treated sewage effluent.

PubMed

Taylor, D S; Richmond, C D; Hunt, J B

1999-03-01

Larval mosquito production was monitored for 16 months in the furrows of a 13.4-ha citrus grove in east-central Florida used for disposal of secondary-treated sewage effluent. Twenty-one species of mosquito were collected, and the 2 most abundant species were Culex nigripalpus and Aedes vexans. An unplanned removal of all brush and trees from the site during the study resulted in an overall decline in larval production, but species diversity remained the same.

Honey bee-collected pollen in agro-ecosystems reveals diet diversity, diet quality, and pesticide exposure.

PubMed

Colwell, Megan J; Williams, Geoffrey R; Evans, Rodger C; Shutler, Dave

2017-09-01

European honey bees Apis mellifera are important commercial pollinators that have suffered greater than normal overwintering losses since 2007 in North America and Europe. Contributing factors likely include a combination of parasites, pesticides, and poor nutrition. We examined diet diversity, diet nutritional quality, and pesticides in honey bee-collected pollen from commercial colonies in the Canadian Maritime Provinces in spring and summer 2011. We sampled pollen collected by honey bees at colonies in four site types: apple orchards, blueberry fields, cranberry bogs, and fallow fields. Proportion of honey bee-collected pollen from crop versus noncrop flowers was high in apple, very low in blueberry, and low in cranberry sites. Pollen nutritional value tended to be relatively good from apple and cranberry sites and poor from blueberry and fallow sites. Floral surveys ranked, from highest to lowest in diversity, fallow, cranberry, apple, and blueberry sites. Pesticide diversity in honey bee-collected pollen was high from apple and blueberry sites and low from cranberry and fallow sites. Four different neonicotinoid pesticides were detected, but neither these nor any other pesticides were at or above LD 50 levels. Pollen hazard quotients were highest in apple and blueberry sites and lowest in fallow sites. Pollen hazard quotients were also negatively correlated with the number of flower taxa detected in surveys. Results reveal differences among site types in diet diversity, diet quality, and pesticide exposure that are informative for improving honey bee and land agro-ecosystem management.

Understanding and Integrating Local Perceptions of Trees and Forests into Incentives for Sustainable Landscape Management

NASA Astrophysics Data System (ADS)

Pfund, Jean-Laurent; Watts, John Daniel; Boissière, Manuel; Boucard, Amandine; Bullock, Renee Marie; Ekadinata, Andree; Dewi, Sonya; Feintrenie, Laurène; Levang, Patrice; Rantala, Salla; Sheil, Douglas; Sunderland, Terence Clarence Heethom; Urech, Zora Lea

2011-08-01

We examine five forested landscapes in Africa (Cameroon, Madagascar, and Tanzania) and Asia (Indonesia and Laos) at different stages of landscape change. In all five areas, forest cover (outside of protected areas) continues to decrease despite local people's recognition of the importance of forest products and services. After forest conversion, agroforestry systems and fallows provide multiple functions and valued products, and retain significant biodiversity. But there are indications that such land use is transitory, with gradual simplification and loss of complex agroforests and fallows as land use becomes increasingly individualistic and profit driven. In Indonesia and Tanzania, farmers favor monocultures (rubber and oil palm, and sugarcane, respectively) for their high financial returns, with these systems replacing existing complex agroforests. In the study sites in Madagascar and Laos, investments in agroforests and new crops remain rare, despite government attempts to eradicate swidden systems and their multifunctional fallows. We discuss approaches to assessing local values related to landscape cover and associated goods and services. We highlight discrepancies between individual and collective responses in characterizing land use tendencies, and discuss the effects of accessibility on land management. We conclude that a combination of social, economic, and spatially explicit assessment methods is necessary to inform land use planning. Furthermore, any efforts to modify current trends will require clear incentives, such as through carbon finance. We speculate on the nature of such incentive schemes and the possibility of rewarding the provision of ecosystem services at a landscape scale and in a socially equitable manner.

Interpretation of data on the aggregate composition of typical chernozems under different land use by cluster and principal component analyses

NASA Astrophysics Data System (ADS)

Kholodov, V. A.; Yaroslavtseva, N. V.; Lazarev, V. I.; Frid, A. S.

2016-09-01

Cluster analysis and principal component analysis (PCA) have been used for the interpretation of dry sieving data. Chernozems from the treatments of long-term field experiments with different land-use patterns— annually mowed steppe, continuous potato culture, permanent black fallow, and untilled fallow since 1998 after permanent black fallow—have been used. Analysis of dry sieving data by PCA has shown that the treatments of untilled fallow after black fallow and annually mowed steppe differ most in the series considered; the content of dry aggregates of 10-7 mm makes the largest contribution to the distribution of objects along the first principal component. This fraction has been sieved in water and analyzed by PCA. In contrast to dry sieving data, the wet sieving data showed the closest mathematical distance between the treatment of untilled fallow after black fallow and the undisturbed treatment of annually mowed steppe, while the untilled fallow after black fallow and the permanent black fallow were the most distant treatments. Thus, it may be suggested that the water stability of structure is first restored after the removal of destructive anthropogenic load. However, the restoration of the distribution of structural separates to the parameters characteristic of native soils is a significantly longer process.

[Effects of deep plowing time during the fallow period on water storage-consumption characteristics and wheat yield in dry-land soil.

PubMed

Dang, Jian You; Pei, Xue Xia; Zhang, Ding Yi; Wang, Jiao Ai; Zhang, Jing; Wu, Xue Ping

2016-09-01

Through a three-year field trail, effects of deep plowing time during the fallow period on water storage of 0-200 cm soil before sowing, water consumption of growth period, and growth and development of wheat were investigated. Results demonstrated that soil water storage (SWS) of the fallow period was influenced by deep plowing time, precipitation, and rainfall distribution. With postponing the time of deep plowing in the fallow period, SWS was increased firstly, and then decreased. SWS with deep plowing in early or middle of August was 23.9-45.8 mm more than that with deep plowing in mid-July. It would benefit SWS when more precipitation occurred in the fallow period or more rainfall was distributed in August and September. Deep plowing at a proper time could facilitate SWS, N and P absorption of wheat, and the number of stems before winter and the spike number. The yield of wheat with deep plowing in early or middle August was 3.67%-18.2% higher than that with deep plowing in mid-July, and it was positively correlated with water storage of 0-200 cm soil during the fallow period and SWS of each soil layer during the wheat growth period. However, this correlation coefficient would be weakened by adequate rainfall in spring, the critical growing period for wheat. The time of deep plowing mainly affected the water consumption at soil layer of 60-140 cm during wheat growth. Under current farming conditions of south Shanxi, the increased grain yield of wheat could be achieved by combining the measures of high wheat stubble and wheat straw covering for holding soil water and deep plowing between the Beginning of Autumn (August 6th) and the Limit of Heat (August 21st) for promoting soil water penetration characteristics to improve the number of stems before winter and spike.

Parasitism of the wheat stem sawfly (Hymenoptera: Cephidae) by Bracon cephi and B. liflogaster (Hymenoptera: Braconidae) in wheat fields bordering tilled and untilled fallow in Montana

Treesearch

J. B. Runyon; W. L. Morrill; D. K. Weaver; P. R. Miller

2002-01-01

We evaluated wheat stem sawfly, Cephus cinctus Norton, parasitism, infestation, and sawfly-cut stems in wheat fields bordering intensely tilled (no visible stubble residue), minimally tilled (>75% stubble residue visible), and untilled (chemical fallow, herbicide fallow management) summer fallow fields in north-central and south-central Montana....

A temporal/spectral analysis of small grain crops and confusion crops. [North Dakota

NASA Technical Reports Server (NTRS)

Johnson, W. R. (Principal Investigator)

1981-01-01

Spectral data from the LANDSAT-2 satellite were used to study the growth cycles of fields of wheat, barley, alfalfa, corn, sunflowers, soybeans, rye, flax, oats, millet, grass, and hay. Signatures of pastures, trees, and idle fallow were also studied. The growth cycles were portrayed in the form of temporal plots of the greeness-brightness transformation vector applied to average channel pixel values within the fields, all of which were in three counties in North Dakota. The plots of each crop reveal characteristics which can be used in crop classification procedures.

National project for the evaluation of ERTS imagery applications to various earth resources problems of Turkey

NASA Technical Reports Server (NTRS)

Alpan, S. (Principal Investigator)

1976-01-01

The author has identified the following significant results. It is observed that LANDSAT images can be used in preparing an accurate tectonic map of the study areas. These images are most useful in geological mapping areas where vegetation cover is sparse. LANDSAT images can be used to identify and separate evergreens and trees with leaves, and they can successfully delineate boundaries of forestry areas. Water holding capacity of the soil, internal and external drainage, vegetation pattern, irrigated and nonirrigated land, and fallow and planted fields are also detected on the LANDSAT imagery.

Evaluation of pre-crops and organic fertilization program on the subsequent crop under Mediterranean conditions: case of South of Italy

NASA Astrophysics Data System (ADS)

Chami, Ziad Al; Hmid, Amine; Baysal, Damla; Amer, Nasser; Bitar, Lina Al; Aksoy, Uygun

2013-04-01

Organic farming systems rely on soil fertility management to enhance the soil chemical properties for the optimization of crop production and increase food quality. Soil fertility-building crops have been reported as a way to reduce inputs of fertilizers, improve soil fertility and increase the subsequent crop yield. A four-year rotation programme was launched by the Mediterranean Agronomic Institute of Bari that aims at identifying the most suitable fertilization strategy in organic farming for Mediterranean countries under the prevailing conditions. The present study was conducted in southern Italy and it consists in evaluating the effects of pre-crops (faba bean, vetch and broccoli) in comparison to a fallow test on the subsequent crop (zucchini, tomato, lettuce and radish) in four consecutive years. Vetch and faba bean were able to satisfy the nutrient requirement of the main crop without any compost application; while commercial compost was applied to broccoli and fallow treatments prior to transplanting the main crop. The main soil chemical parameters: organic carbon, total nitrogen, available phosphorus, and exchangeable potassium were improved over four years experiment. The trend was consistent; all main chemical parameters displayed a significant increase in all treatments, while no significant differences were obtained between treatments. Based on the results obtained in the first two years, the effect of different pre-crops and fertilizers on zucchini and organic tomato qualitative and quantitative parameters were not significant. While the results obtained in the third and forth years showed that pre-crops and fertilizers had significant effects on lettuce and radish yield and quality. Low nitrate contents were found in fallow and broccoli treatments (70 to 80% lower) in comparison to Vetch and Faba bean treatments and the ascorbic acid contents were (20 to 40% higher) after broccoli and fallow treatments. The low nitrate content in broccoli and fallow treatment can be due to the compost application rich in humified organic matter. Humified organic matter breaks down very slowly in the soil releasing gradually nutrients. Whereas, the high amount of fresh organic matter incorporated with vetch and faba bean may break down quickly in comparison to compost, releasing a flush of nutrients for plant growth. Additionally, nutrient accumulation such as nitrate can lead in a decrease in the vitamin C content. These suggest that the pre-crops, especially vetch and faba bean, can improve main crop yields; while compost improves the quality parameters.

Effect of subsoiling in fallow period on soil water storage and grain protein accumulation of dryland wheat and its regulatory effect by nitrogen application.

PubMed

Sun, Min; Gao, ZhiQiang; Zhao, WeiFeng; Deng, LianFeng; Deng, Yan; Zhao, HongMei; Ren, AiXia; Li, Gang; Yang, ZhenPing

2013-01-01

To provide a new way to increase water storage and retention of dryland wheat, a field study was conducted at Wenxi experimental site of Shanxi Agricultural University. The effect of subsoiling in fallow period on soil water storage, accumulation of proline, and formation of grain protein after anthesis were determined. Our results showed that subsoiling in fallow period could increase water storage in the 0-300 cm soil at pre-sowing stage and at anthesis stage with low or medium N application, especially for the 60-160 cm soil. However, the proline content, glutamine synthetase (GS) activity, glutamate dehydrogenase (GDH) activity in flag leaves and grains were all decreased by subsoiling in fallow period. In addition, the content of albumin, gliadin, and total protein in grains were also decreased while globulin content, Glu/Gli, protein yield, and glutelin content were increased. With N application increasing, water storage of soil layers from 20 to 200 cm was decreased at anthesis stage. High N application resulted in the increment of proline content and GS activity in grains. Besides, correlation analysis showed that soil storage in 40-160 cm soil was negatively correlated with proline content in grains; proline content in grains was positively correlated with GS and GDH activity in flag leaves. Contents of albumin, globulin and total protein in grains were positively correlated with proline content in grains and GDH activity in flag leaves. In conclusion, subsoiling in fallow period, together with N application at 150 kg·hm(-2), was beneficial to increase the protein yield and Glu/Gli in grains which improve the quality of wheat.

Effect of Subsoiling in Fallow Period on Soil Water Storage and Grain Protein Accumulation of Dryland Wheat and Its Regulatory Effect by Nitrogen Application

PubMed Central

Sun, Min; Gao, ZhiQiang; Zhao, WeiFeng; Deng, LianFeng; Deng, Yan; Zhao, HongMei; Ren, AiXia; Li, Gang; Yang, ZhenPing

2013-01-01

To provide a new way to increase water storage and retention of dryland wheat, a field study was conducted at Wenxi experimental site of Shanxi Agricultural University. The effect of subsoiling in fallow period on soil water storage, accumulation of proline, and formation of grain protein after anthesis were determined. Our results showed that subsoiling in fallow period could increase water storage in the 0–300 cm soil at pre-sowing stage and at anthesis stage with low or medium N application, especially for the 60–160 cm soil. However, the proline content, glutamine synthetase (GS) activity, glutamate dehydrogenase (GDH) activity in flag leaves and grains were all decreased by subsoiling in fallow period. In addition, the content of albumin, gliadin, and total protein in grains were also decreased while globulin content, Glu/Gli, protein yield, and glutelin content were increased. With N application increasing, water storage of soil layers from 20 to 200 cm was decreased at anthesis stage. High N application resulted in the increment of proline content and GS activity in grains. Besides, correlation analysis showed that soil storage in 40–160 cm soil was negatively correlated with proline content in grains; proline content in grains was positively correlated with GS and GDH activity in flag leaves. Contents of albumin, globulin and total protein in grains were positively correlated with proline content in grains and GDH activity in flag leaves. In conclusion, subsoiling in fallow period, together with N application at 150 kg·hm−2, was beneficial to increase the protein yield and Glu/Gli in grains which improve the quality of wheat. PMID:24098371

Impact of forested fallows on fertility and mercury content in soils of the Tapajós River region, Brazilian Amazon.

PubMed

Patry, Cynthia; Davidson, Robert; Lucotte, Marc; Béliveau, Annie

2013-08-01

Recent research on slash-and-burn agriculture conducted in the Amazonian basin has suggested that soils must be left under forested fallows for at least 10 to 15 years to regain fertility levels comparable to non-disturbed forests in order to allow for short cycle crop cultivation. However, small scale farmers tend nowadays to re-burn secondary forests as soon as after 3 to 5 years, thus could contribute to further reduce soil fertility and could enhance the transfer of mercury (Hg) naturally present in soils of the region towards water courses. The present research project sets out to characterize the impact of forested fallows of differing age and land-use history on soils properties (fertility and Hg contents) in the region of the Tapajós River, an active pioneer front of the Brazilian Amazon. To do this, soil samples in forested fallows of variable age and in control primary forests were retrieved. In general, soil fertility of grouped forested fallows of different ages was similar to that of the primary forests. But when discriminating soils according to their texture, forested fallows on coarse grained soils still had much higher NH4/NO3 ratios, NH4 and Ca contents than primary forests, this even 15 years after burning. The impact of repeated burnings was also assessed. Fallows on coarse grained soils showed an impoverishment for all variables related to fertility when the number of burnings was 5 or more. For fallows on fine grained soils that underwent 5 or more burnings, NO3 contents were low although a cation enrichment was observed. Total soil Hg content was also sensitive to repeated burnings, showing similar losses for forested fallows established on both types of soil. However, Hg linked to coarse particles appeared to migrate back towards fine particles at the surface of coarse grained soils in fallows older than 7 years. Copyright © 2013 Elsevier B.V. All rights reserved.

Replacing fallow by cover crops: economic sustainability

NASA Astrophysics Data System (ADS)

Gabriel, José Luis; Garrido, Alberto; Quemada, Miguel

2013-04-01

Replacing fallow by cover crops in intensive fertilized systems has been demonstrated as an efficient tool for reducing nitrate leaching. However, despite the evident environmental services provided and the range of agronomic benefits documented in the literature, farmers' adoption of this new technology is still limited because they are either unwilling or unable, although adoption reluctance is frequently rooted in low economic profitability, low water se efficiency or poor knowledge. Economic analyses permit a comparison between the profit that farmers obtain from agricultural products and the cost of adopting specific agricultural techniques. The goal of this study was to evaluate the economic impact of replacing the usual winter fallow with cover crops (barley (Hordeum vulgare L., cv. Vanessa), vetch (Vicia villosa L., cv. Vereda) and rapeseed (Brassica napus L., cv. Licapo)) in irrigated maize systems and variable Mediterranean weather conditions using stochastic Monte-Carlo simulations of key farms' financial performance indicators. The three scenarios studied for each cover crop were: i) just leaving the cover crop residue in the ground, ii) leaving the cover crop residue but reduce following maize fertilization according to the N available from the previous cover crop and iii) selling the cover crop residue for animal feeding. All the scenarios were compared with respect to a typical maize-fallow rotation. With observed data from six different years and in various field trials, looking for different weather conditions, probability distribution functions of maize yield, cover crop biomass production and N fertilizer saving was fitted. Based in statistical sources maize grain price, different forage prices and the cost of fertilizer were fitted to probability distribution functions too. As result, introducing a cover crop involved extra costs with respect to fallow as the initial investment, because new seed, herbicide or extra field operations. Additional costs varied from 28 to 73 € ha-1 but, results suggest that barley and vetch as cover crops increases maize yields, being a strategy that stochastically dominates the fallow. In this case, even without selling residue and without fertilizer reduction, vetch treatment increased the benefits with respect to the fallow in almost two out of three years and barley treatment did so in one year out of two. When biomass was sold as forage, benefits increase in 80% of the years for the vetch and in 70% of years for the barley with respect to the fallow. However, rapeseed was not a good cover crop for the Mediterranean region because poorly adaptation to the weather conditions. Then, cover crops can lead to increase of economical benefits improving environmental conditions at the same time. Acknowledgements: Financial support by Spain CICYT (ref. AGL2005-00163 and AGL 2011-24732), Comunidad de Madrid (project AGRISOST, S2009/AGR-1630), Belgium FSR 2012 (ref. SPER/DST/340-1120525) and Marie Curie actions.

Serosurvey for antibodies to malignant catarrhal fever-associated viruses in free-living and captive cervids in Germany.

PubMed

Frölich, K; Li, H; Müller-Doblies, U

1998-10-01

A total of 486 serum samples collected from several species of both free-living and captive cervids in Germany was examined for antibodies against malignant catarrhal fever (MCF)-associated viruses (MCFV) by a competitive-inhibition enzyme-linked immunosorbent assay (CI-ELISA). Eleven (2%) of these samples were positive for antibodies against MCFV. Among 157 serum samples collected from 16 different species of captive deer including four (7%) of 54 fallow deer and one (7%) of 14 sika deer (Cervus nippon) were seropositive. Among 329 samples from three species of free-ranging deer, including 253 roe deer (Capreolus capreolus), 22 red deer (Cervus elaphus) and 54 fallow deer (Cervus dama), only fallow deer were antibody-positive. Of the 25 fallow deer samples collected between 1990 and 1993, four (16%) were seropositive. Among 29 free-ranging fallow deer samples collected in the hunting period 1996-1997, antibodies to MCFV were detected in two (7%) of these sera. All of these fallow deer samples were collected from a circumscribed area in northern Germany. In the same area a high seroprevalence (72%) to MCFV was observed in domestic sheep (n = 50). Among 20 sheep samples (buffy coat) and 15 fallow deer samples (spleen or lymph nodes) examined for ovine herpesvirus 2 (OvHV-2) by PCR, all 20 sheep samples examined were OvHV-2 positive, but all of the 15 fallow deer samples, including seven seropositive deer, were OvHV-2 negative.

Neospora caninum in Axis Deer ( Axis axis ) and Fallow Deer ( Dama dama ) in Northern Mexico.

PubMed

De La Torre, Jose R; Bautista-Piña, Christian; Alfonso Ortega-S, J; Cantu-Covarruvias, Antonio; Genoveva Alvarez-Ojeda, Maria; Romero-Salas, Dora; Henke, Scott E; Hilton, Clayton D; Hewitt, David G; De Young, Randy W; Campbell, Tyler A; Bryant, Fred C

2017-01-01

Serum samples from 18 axis deer ( Axis axis ) and 19 fallow deer ( Dama dama ) were analyzed with an enzyme-linked immunosorbent assay for Neospora caninum antibodies. Two axis (11%) and two fallow deer (11%) were positive for N. caninum antibodies.

Intensifying a semi-arid dryland crop rotation by replacing fallow with pea

USDA-ARS?s Scientific Manuscript database

Increasing dryland cropping system intensity in the semi-arid central Great Plains by reducing frequency of fallow can add diversity to cropping systems and decrease erosion potential. However elimination of the periodic fallow phase has been shown to reduce yields of subsequent crops in this region...

Mosquitoes and other aquatic insects in fallow field biotopes and rice paddy fields.

PubMed

Ohba, S Y; Matsuo, T; Takagi, M

2013-03-01

Fallow field biotopes that develop from abandoned rice fields are man-made wetlands that provide new habitats for various aquatic animals. Although consideration of such biotopes generally focuses on their positive aspects, this study evaluated the negative aspects of establishing fallow field biotopes with regard to mosquito breeding sites. To determine whether fallow field biotopes become breeding habitats for vector mosquitoes, we evaluated mosquito fauna in fallow field biotopes and adjacent rice fields. We found larvae of Anopheles lesteri, Anopheles sinensis and Culex tritaeniorhynchus (all: Diptera: Culicidae) in the biotopes. Although abundances of mosquito larvae in the biotopes and rice fields were statistically similar, mosquito abundances in rice fields increased dramatically in August when the water level reduced after the rainy season. The abundance and variety of the mosquitoes' natural predators were greater in biotopes than in rice fields because the former are a permanent and stable aquatic environment. A generalized linear mixed model showed a negative effect of predator diversity on mosquito larvae abundance in both habitats. Although fallow field biotopes become breeding habitats for vector mosquitoes, establishing biotopes from fallow fields in order to protect various aquatic animals, including mosquito insect predators, may help to control mosquito breeding. © 2012 The Royal Entomological Society.

Grazing and tillage effects on soil properties, rain infiltration and sediment transport during fallow

USDA-ARS?s Scientific Manuscript database

On the semiarid Southern Great Plains, precipitation and soil water stored during fallow determine dryland production of wheat (Triticum aestivum L.) and grain sorghum [Sorghum bicolor (L.) Moench] grown in the wheat-sorghum-fallow (WSF) rotation. In this three-year rotation, soil water storage is t...

Replacing fallow with forage triticale in dryland crop rotations increases profitability

USDA-ARS?s Scientific Manuscript database

A common dryland rotational cropping system in the semi-arid central Great Plains of the U.S. is wheat (Triticum aestivum L.)-corn (Zea mays L.)-fallow (WCF). However, the 12-month fallow period following corn production has been shown to be relatively inefficient in storing precipitation during the...

The organic matter of the different ages fallow Luvisols

NASA Astrophysics Data System (ADS)

Giniyatullin, K. G.; Valeeva, A. A.; Smirnova, E. V.; Okunev, R. V.; Latipova, L. I.

2018-01-01

The study of the change in the humus state of the fallow Luvisols of different ages under the influence of weeds and meadow vegetation was carried out in dynamics (after 5 years). It is shown that both under weedy and meadow vegetation there is a statistically significant accumulation of organic matter in the upper part of the long-arable horizon. Based on the study of composition and spectral properties of soil organic matter in fallow soils of different ages concluded that the significant qualitative change of the humus state of fallow soils requires significant time, measured at least decades.

Sensitive and specific enzyme-linked immunosorbent assay for detecting serum antibodies against Mycobacterium avium subsp. paratuberculosis in fallow deer.

PubMed

Prieto, José M; Balseiro, Ana; Casais, Rosa; Abendaño, Naiara; Fitzgerald, Liam E; Garrido, Joseba M; Juste, Ramon A; Alonso-Hearn, Marta

2014-08-01

The enzyme-linked immunosorbent assay (ELISA) is the diagnostic test most commonly used in efforts to control paratuberculosis in domestic ruminants. However, commercial ELISAs have not been validated for detecting antibodies against Mycobacterium avium subsp. paratuberculosis in wild animals. In this study, we compared the sensitivities and specificities of five ELISAs using individual serum samples collected from 41 fallow deer with or without histopathological lesions consistent with paratuberculosis. Two target antigenic preparations were selected, an ethanol-treated protoplasmic preparation obtained from a fallow deer M. avium subsp. paratuberculosis isolate (ELISAs A and B) and a paratuberculosis protoplasmic antigen (PPA3) (ELISAs C and D). Fallow deer antibodies bound to the immobilized antigens were detected by using a horseradish peroxidase (HRP)-conjugated anti-fallow deer IgG antibody (ELISAs A and C) or HRP-conjugated protein G (ELISAs B and D). A commercially available assay, ELISA-E, which was designed to detect M. avium subsp. paratuberculosis antibodies in cattle, sheep, and goats, was also tested. Although ELISAs A, C, and E had the same sensitivity (72%), ELISAs A and C were more specific (100%) for detecting fallow deer with lesions consistent with paratuberculosis at necropsy than was the ELISA-E (87.5%). In addition, the ELISA-A was particularly sensitive for detecting fallow deer in the latent stages of infection (62.5%). The antibody responses detected with the ELISA-A correlated with both the severity of enteric lesions and the presence of acid-fast bacteria in gut tissue samples. In summary, our study shows that the ELISA-A can be a cost-effective diagnostic tool for preventing the spread of paratuberculosis among fallow deer populations. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

Sensitive and Specific Enzyme-Linked Immunosorbent Assay for Detecting Serum Antibodies against Mycobacterium avium subsp. paratuberculosis in Fallow Deer

PubMed Central

Prieto, José M.; Balseiro, Ana; Casais, Rosa; Abendaño, Naiara; Fitzgerald, Liam E.; Garrido, Joseba M.; Juste, Ramon A.

2014-01-01

The enzyme-linked immunosorbent assay (ELISA) is the diagnostic test most commonly used in efforts to control paratuberculosis in domestic ruminants. However, commercial ELISAs have not been validated for detecting antibodies against Mycobacterium avium subsp. paratuberculosis in wild animals. In this study, we compared the sensitivities and specificities of five ELISAs using individual serum samples collected from 41 fallow deer with or without histopathological lesions consistent with paratuberculosis. Two target antigenic preparations were selected, an ethanol-treated protoplasmic preparation obtained from a fallow deer M. avium subsp. paratuberculosis isolate (ELISAs A and B) and a paratuberculosis protoplasmic antigen (PPA3) (ELISAs C and D). Fallow deer antibodies bound to the immobilized antigens were detected by using a horseradish peroxidase (HRP)-conjugated anti-fallow deer IgG antibody (ELISAs A and C) or HRP-conjugated protein G (ELISAs B and D). A commercially available assay, ELISA-E, which was designed to detect M. avium subsp. paratuberculosis antibodies in cattle, sheep, and goats, was also tested. Although ELISAs A, C, and E had the same sensitivity (72%), ELISAs A and C were more specific (100%) for detecting fallow deer with lesions consistent with paratuberculosis at necropsy than was the ELISA-E (87.5%). In addition, the ELISA-A was particularly sensitive for detecting fallow deer in the latent stages of infection (62.5%). The antibody responses detected with the ELISA-A correlated with both the severity of enteric lesions and the presence of acid-fast bacteria in gut tissue samples. In summary, our study shows that the ELISA-A can be a cost-effective diagnostic tool for preventing the spread of paratuberculosis among fallow deer populations. PMID:24872517

Fourteen Years of Diverse Annual No-Till Cropping in Washington’s Winter Wheat – Summer Fallow Region

USDA-ARS?s Scientific Manuscript database

We have completed the 14th year of a cropping systems experiment to evaluate diverse annual (i.e., no summer fallow) cropping systems using no-till as an alternative to tillage-intensive winter wheat (Triticum aestivum L.) – summer fallow (WW-SF). Soft white and hard white classes of winter and spri...

Profiling Fallow Land in California's Drought Conditions Using the Cropland Data Layer

NASA Astrophysics Data System (ADS)

Zakzeski, A.

2014-12-01

Drought conditions caused by soaring temperatures and decreasing amounts of precipitation continue to plague the particularly heavily cultivated areas of California. Research efforts from state and federal government stakeholders are ongoing to track, quantify, and forecast the impact of these changing conditions. For the State of California, beginning in 2007, the US Department of Agriculture's National Agricultural Statistics Service (NASS) annually began using remote sensing techniques to produce a geospatial agricultural land cover classification data product called the Cropland Data Layer (CDL). The CDL is produced using current farmer reported data in conjunction with satellite imagery collected during the summer growing season each year to identify the type and location of multiple categories of land cover across the state. Tracking the impact of drought conditions on agriculture in California can be done by analyzing the land cover category for fallow and idle agricultural land within the CDL. Using multiple years of CDLs, profiles are created to document the different characteristics of fallow land across the agricultural landscape including NDVI measurements, average field sizes, and total acreage amounts in each county. The fallow land profiles also detail the increasing amount of fallow land appearing in what was historically agricultural intensive areas, as well as what types of land cover are being replaced with fallow land instead of being cultivated during the growing season. Understanding the dynamic changes of fallowing land in each county helps researchers quantify the agricultural impact and assist with mitigation efforts caused by the water shortages.

Distribution and abundance of fallow deer leks at Point Reyes National Seashore, California

USGS Publications Warehouse

Fellers, Gary M.; Osbourn, Michael

2006-01-01

Only two species of ungulates (hoofed mammals) are native to Marin County, tule elk (Cervis elaphus nannodes) and Columbian black-tailed deer (Odocoileus hemionus columbianus). In the 1940s, European fallow deer (Dama dama) obtained from the San Francisco Zoo were released at Point Reyes. When Point Reyes National Seashore was established in 1962, fallow deer were well established within the boundaries of the National Seashore. The fallow deer population was estimated to be 500 in 1973 (Wehausen, 1973) and that number increased to 860 by 2005 (National Park Service, unpubl. data). Fallow deer have an unusual mating system. During the fall mating season (or rut), male fallow deer establish areas known as leks where they display to potential mates (Hirth, 1997). This behavior is unique among deer and elk, but it is similar to breeding systems used by grouse and a few other birds and mammals. Formation of leks in ungulates decreases the number of aggressive encounters in which dominant males are involved when the local male density becomes too high, because the spatial stability of territories in leks reduces the number of aggressive encounters between males (Hovi et al., 1996; Pelabon et al., 1999). A fallow deer lek is typically an area of about 100-150 m2 and typically includes two to five males. Using their hooves and antlers, each male clears away most or all of the vegetation and digs a rutting pit that he defends throughout the breeding season.

Windthrow and fallow-forest successions impacts in soil carbon stocks and GHG fluxes spatial variability and dynamics in the Central Russia' reserve spruce ecosystems

NASA Astrophysics Data System (ADS)

Vasenev, Ivan; Ivanov, Alexey; Komarova, Tatyana; Valentini, Riccardo

2015-04-01

High spatial and temporal variability is mutual feature for most forest soils that is especially obvious in case of their carbon stocks and GHG fluxes. This phenomenon is generally well-known but not so often becomes the object of special precision investigation in detail and small scales so there are still serious gaps in its principal factors understanding due to their high bioclimatic, regional, landscape, tree species and temporal variability. Southern taiga is one of the most environmentally important world zonal forest ecosystems due to its still comparatively intensive carbon biogeochemical cycle and huge area in the northern Eurasia with strong anthropogenic impacts by Western & Central European and Southern & Eastern Asian regions. Central Forest Biospheric Reserve (Tver region, 360 km to North-West from Moscow) is the principal southern-taiga reserve in the European territory of Russia. Since start of its research activity in 1939 the reserve became the regional center of mature spruce ecosystem structure and dynamics investigation. In 1970-1980-s there have been done complex investigations of windthrow soil patterns and fallow-forest successions. Since middle of 1990-s the ecosystem-level GHG fluxes have been observed by eddy covariance method. Since 2012 the detailed year-round monitoring is running in the southern-taiga zonal station of the regional system RusFluxNet with especial attention on the soil carbon stocks and GHG fluxes spatial variability and dynamics due to windthrow and fallow-forest successions (in frame of RF Governmental projects #11.G34.31.0079 and #14.120.14.4266). Soil carbon dynamics is investigated in decades-hundred-year chronosequences of dominated parcels and different-size windthrow soil cover patterns, including direct investigation during last 33 years with detailed mapping, soil profile morphometrics and bulk density, morphogenetic and statistical analysis of mass data. Morphogenetic analysis of microrelief, soil profile and cover have been accompanied by researches of soil regimes (temperature, moisture, pH, oxidation-reduction potential, microbiological activity) and transformations of representative topsoil materials at the different stages of windthrow soil successions. Since 2012 soil CO2 fluxes have been analyzed every ten days in situ by method of exposition chambers with infra red gas analyzer (Li-Cor 820). At the same periods soil gas fluxes have been sampled from the exposition chambers into vials with the following CH4 and N2O analysis by gas chromatograph. The carried out researches have shown sharp increase of rates of typomorphic soil forming processes within windthrow hole and mound soil successions: (a) lateral input of organic matter in soils of fresh holes - up to 2-3 kg m-2y-1; (b) fulvic acid formation - up to 100-200 g m-2y-1 in soils of young holes and mounds; (c) Al-Fe-humus migration - up to 0.7-1.2 kg cm m-2y-1; (d) humus-accumulated and eluvial horizon development - up to 1-2 mm y-1. The conducted researches have shown high temporal and spatial variability of CO2 fluxes due to soil cover and windthrow complex patterns, windthrow or fallow-forest succession stage and age, air and soil temperature (up to R = 0.64 for taiga, and R = 0.75 for fallow), soil moisture (up to R = -0.65/0.66 both for taiga and fallow) and some other characteristics of the studied objects. Soil CO2 emission is essentially decreased with fallow-forest age. Maximum CO2 fluxes have been observed between 12:00 and 16:00. Within fallow-forest succession the maximum CH4 emission has been fixed in first (grass) stage, and N2O fluxes increase due to temperature rise and moisture decreasing. Usually there is stronger effect on GHG fluxes by air temperature than soil one due to comparatively thin layer of soil organic and/or humus-accumulative subhorizons with maximum biological activity that usually determines the total rate of GHG principal soil fluxes. Unfavorable seasonal climatic conditions (dry season or low temperature) determine essential (in 1.5-2 times) decreasing not only in soil GHG fluxes but in level of their spatial variability, seasonal and daily dynamics too. These trends are most obvious in case of more open ecosystems at the first stages of the fallow-forest succession. Understanding the principal regularities of spatial and temporal changes in soil GHG fluxes help better modelling them in the process of spatial intra- and extrapolations, seasonal and interseasonal predictions, taking into attention basic and current principal factors limiting GHG fluxes.

Soil greenhouse gases fluxes in forest - fallow succession at the Central Forest Reserve in European Russia

NASA Astrophysics Data System (ADS)

Komarova, Tatiana; Vasenev, Ivan

2017-04-01

One of the principal factors influencing the current level of the greenhouse fluxes are land-use changes, including the forest restoration in fallow lands, which is widespread at the Central Region of Russia. The comprehensive environmental studies of soil greenhouse fluxes have been done in comparable sites with different stages of the forest-fallow successions in the southern part of the Central Forest Reserve with spruce domination in the mature forest - representative southern-taiga ecosystems. Seasonal and diurnal dynamics CO2 fluxes measurements were carried out in situ using a mobile gas analyzer Li-820 with soil exposure chambers and parallel observation of air temperature, soil temperature and moisture. Also, every ten days the soil air has been sampled in the vials for further CO2, CH4 and N2O flux measurements by the stationary gas chromatograph. Within forest-fallow successions there are shown the litter gradual development, humus-accumulative horizon differentiation, soil acidity and bulk density increasing. At the same time there is enough obvious in the down part of past-arable horizon gradual restoration of the podzolic horizon. The monitoring results have shown the essential decreasing of soil CO2 fluxes (in 2 times) in frame of successions. The maximum CO2 fluxes have been fixed in July with optimal soil temperature/moisture ratio. In the middle of July the maximum CO2 emission is observed in fallow grassland (34,1 g CO2 / m2day), that is almost in 2-times more than in spruce-forest after fallow stage of 120-150 years. It is important that soil CO2 fluxes essentially increase with soil temperature rise (with up to R = 0,75) and drop soil moisture (with up to R = - 0,66). During the day, the most intense soil CO2 fluxes have been observed from case of 12:00 to 18:00. The maximum CO2 flux has been recorded at 15:00 in the fallow grassland (23 g CO2 / m2 day). In the forest-fallow stage of 10-15 years the maximum soil CO2 flux observed at 12 hours was (16 - 17 g CO2 / m2 day). There were not strong differences in soil CO2 fluxes of these two investigated sites in the night time from 21:00 to 9:00. The essential daily dynamics must be taken into attention for assessment the seasonal fluxes of greenhouse gases and carbon balance. The maximum CH4 flux has been fixed in the fallow grassland and forest-fallow stage of 10 - 15 years - in contrast to stable soil sink CH4 in the spruce-forest after forest-fallow older than 120 years. In the fallow meadow grassland there are observed CH4 emission in July and sink in June and August, with a maximum flux in early July. The level of N2O fluxes usually does not exceed 0,2 mg N2O /m2*day with the maximum flux in mid-August and light sink in early June.

Summer cover crops and soil amendments to improve growth and nutrient uptake of okra

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Q.R.; Li, Y.C.; Klassen, W.

2006-04-15

A pot experiment with summer cover crops and soil amendments was conducted in two consecutive years to elucidate the effects of these cover crops and soil amendments on 'Clemson Spineless 80' okra (Abelmoschus esculentus) yields and biomass production, and the uptake and distribution of soil nutrients and trace elements. The cover crops were sunn hemp (Crotalaria juncea), cowpea (Vigna unguiculata), velvetbean (Mucuna deeringiana), and sorghum sudan-grass (Sorghum bicolor x S. bicolor var. sudanense) with fallow as the control. The organic soil amendments were biosolids (sediment from wastewater plants), N-Viro Soil (a mixture of biosolids and coal ash), coal ash (amore » combustion by-product from power plants), co-compost (a mixture of 3 biosolids: 7 yard waste), and yard waste compost (mainly from leaves and branches of trees and shrubs, and grass clippings) with a soil-incorporated cover crop as the control. As a subsequent vegetable crop, okra was grown after the cover crops, alone or together with the organic soil amendments, had been incorporated. All of the cover crops, except sorghum sudangrass in 2002-03, significantly improved okra fruit yields and the total biomass production. Both cover crops and soil amendments can substantially improve nutrient uptake and distribution. The results suggest that cover crops and appropriate amounts of soil amendments can be used to improve soil fertility and okra yield without adverse environmental effects or risk of contamination of the fruit. Further field studies will be required to confirm these findings.« less

Nitrogen controls spatial and temporal variability of substrate-induced respiration within seven years of bare fallow

NASA Astrophysics Data System (ADS)

Meyer, Nele; Bornemann, Ludger; Welp, Gerhard; Amelung, Wulf

2015-04-01

Bare fallow management goes along with lacking supply of new C sources; yet, little is known on the spatio-temporal controls of microbial adaptation processes. Here we hypothesized that microbial activity parameters decline upon bare fallow but that their spatial patterns are increasingly controlled by nutrient status as fallow management proceeds. To test these hypotheses, we investigated spatial and temporal patterns of substrate-induced respiration (SIR) and basal respiration curves in an arable field after 1, 3, and 7 years of bare fallow but with large within-field heterogeneity of physicochemical soil parameters. The analyses comprised the contents of SOC, mineral nitrogen (Nmin), particulate organic matter (POM), texture of the fine earth, and the proportion of rock fragments as well as basal respiration and several SIR fitting parameters (microbial biomass, microbial growth rates, peak respiration rates, cumulative CO2 release) each with and without additions of mineral N and P. We also repeated substrate (i.e. glucose) additions following the first SIR measurement. The results revealed that most respiration parameters like basal respiration, microbial biomass, and growth rates showed no or inconsistent responses to spatial and temporal patterns of basic soil properties like SOC, Nmin or texture. However, bare fallow changed the shape of the SIR curves; it developed two distinct microbial growth peaks at advanced stages of fallow, i.e. a delayed CO2 release. Likewise, the maximum respiration rate during the first growth phase declined during 7 years of fallow by 47% but its spatial distribution was always correlated with Nmin contents (r = 0.43 - 0.79). The nutrient additions suggested that these changes in SIR curves were caused by N deficiency; the first peak increased after N additions while the second growth phase diminished. Intriguingly, a repeated glucose addition had a similar effect on the SIR curves as the glucose+N addition. Thus, N deficiency apparently subsided during SIR. The results suggested that soil microbes acquire nitrogen from refractory SOM pools (i.e. microbial nitrogen mining). Hence, there was no significant decrease in cumulative CO2 evolution with proceeding time of fallow. As soil microorganisms maintained their functionality there was no overall loss in potential microbial activity, irrespective of the spatial patterns of other soil properties.

Plant communities, soil carbon, and soil nitrogen properties in a successional gradient of sub-alpine meadows on the eastern Tibetan plateau of China.

PubMed

Li, Wen-Jin; Li, Jin-Hua; Knops, Johannes M H; Wang, Gang; Jia, Ju-Jie; Qin, Yan-Yan

2009-10-01

To assess the recovery trajectory and self-maintenance of restored ecosystems, a successional gradient (1, 3, 5, 15, and 30 years after abandonment) was established in a sub-alpine meadow of the eastern Tibetan Plateau in China. Plant communities and soil carbon and nitrogen properties were investigated and analyzed. Regression analyses were used to assess the models (linear or quadratic) relating measures of species richness, soil carbon and nitrogen properties to fallow time. We found that species richness (S) increased over the first 20 years but decreased thereafter, and aboveground biomass showed a linear increase along the fallow time gradient. The richness of different functional groups (forb, grass and legume) changed little along the fallow time gradient, but their corresponding above ground biomass showed the U-shaped, humped or linear pattern. Soil microbial carbon (MBC) and nitrogen (MBN) in the upper 20 cm showed a U-shaped pattern along the fallow time gradient. However, soil organic carbon (C(org)) and total nitrogen (TN) in the soil at depth greater than 20 cm showed significant patterns of linear decline along the fallow time gradient. The threshold models of species richness reflected best the recovery over the 15 year fallow period. These results indicated that fallow time had a greater influence on development of the plant community than soil processes in abandoned fields in sub-alpine meadow ecosystem. These results also suggested that although the succession process did not significantly increase soil C, an increase in microbial biomass at the latter stage of succession could promote the decomposability of plant litter. Therefore, abandoned fields in sub-alpine meadow ecosystem may have a high resilience and strong rehabilitating capability under natural recovery condition.

Effect of environment and fallow period on Cosmopolites sordidus population dynamics at the landscape scale.

PubMed

Duyck, P-F; Dortel, E; Vinatier, F; Gaujoux, E; Carval, D; Tixier, P

2012-10-01

Understanding how the population dynamics of insect pests are affected by environmental factors and agricultural practices is important for pest management. To investigate how the abundance of the banana weevil, Cosmopolites sordidus (Coleoptera: Curculionidae), is related to environmental factors and the length of the fallow period in Martinique, we developed an extensive data set (18,130 observations of weevil abundance obtained with pheromone traps plus associated environmental data) and analysed it with generalized mixed-effects models. At the island scale, C. sordidus abundance was positively related to mean temperature and negatively related to mean rainfall but was not related to soil type. The number of insects trapped was highest during the driest months of the year. Abundance of C. sordidus decreased as the duration of the preceding fallow period increased. The latter finding is inconsistent with the view that fallow-generated decomposing banana tissue is an important resource for larvae that leads to an increase in the pest population. The results are consistent with the view that fallows, in association with pheromone traps, are effective for the control of the banana weevil.

Quality of Meat (Longissimus dorsi) from Male Fallow Deer (Dama dama) Packaged and Stored under Vacuum and Modified Atmosphere Conditions

PubMed Central

Piaskowska, N.; Daszkiewicz, T.; Kubiak, D.; Zapotoczny, P.

2016-01-01

This study evaluated the effect of vacuum and modified atmosphere (40% CO2+60% N2, MA) packaging on the chemical composition, physicochemical properties and sensory attributes of chill-stored meat from 10 fallow deer (Dama dama) bucks at 17 to 18 months of age. The animals were hunter-harvested in the forests of north-eastern Poland. During carcass dressing (48 to 54 h post mortem), both musculus longissimus muscles were cut out. Each muscle was divided into seven sections which were allocated to three groups: 0, A, and B. Samples 0 were immediately subjected to laboratory analyses. Samples A were vacuum-packaged, and samples B were packaged in MA. Packaged samples were stored for 7, 14, and 21 days at 2°C. The results of the present study showed that the evaluated packaging systems had no significant effect on the quality of fallow deer meat during chilled storage. However, vacuum-packaged meat samples were characterised by greater drip loss. Vacuum and MA packaging contributed to preserving the desired physicochemical properties and sensory attributes of meat during 21 days of storage. Regardless of the packaging method used, undesirable changes in the colour, water-holding capacity and juiciness of meat, accompanied by tenderness improvement, were observed during chilled storage. PMID:27165026

[Change characteristics of soil moisture and nutrients in rain-fed winter wheat field under different fertilization modes in Southern Shanxi of China during summer fallow period].

PubMed

Li, Ting-Liang; Xie, Ying-He; Hong, Jian-Ping; Feng, Qian; Sun, Cheng-Hong; Wang, Zhi-Wei

2013-06-01

In 2009-2011, a field experiment was conducted in a rain-fed winter wheat field in Southern Shanxi of China to study the effects of different fertilization modes on the change characteristics of soil moisture and nitrate-N contents in 0-200 cm layer and of soil available phosphorus (Oslen-P) and potassium contents in 0-40 cm layer during summer fallow period (from June to September). Three fertilization modes were installed, i. e., conventional fertilization (CF), recommended fertilization (RF), and ridge film furrow planting (RFFP) combined with straw mulch. The results showed that the rainfall in summer fallow period could complement the consumed water in 0-200 cm soil layer in dryland wheat field throughout the growth season, and more than 94% of the water storage was in 0-140 cm soil layer, with the fallow efficiency ranged from 6% to 27%. The rainfall in summer fallow period caused the soil nitrate-N moving downward. 357-400 mm rainfall could make the soil nitrate-N leaching down to 100 cm soil layer, with the peak in 20-40 cm soil layer. Straw mulching or plastic film with straw mulch in summer fallow period could effectively increase the Oslen-P and available K contents in 0-40 cm soil layer, and the accumulative increment in three summer fallow periods was 16-45% and 36-49%, respectively. Among the three modes, the binary coverage mode of RFFP plus furrow straw mulching had the best effect in maintaining soil water and fertility. The accumulative water storage and mineral N in 0-200 cm soil layer in three summer fallow periods were up to 215 mm and 90 kg x hm(-2), and the accumulative Oslen-P and available K contents in plough layer were increased by 2.7 mg x kg(-1) and 83 mg x kg(-1), respectively, being significantly higher than those in treatments CF and RF. There were no significant differences in the change characteristics in the soil moisture and nutrients between treatments CF and RF.

Simulating soil organic carbon in a wheat–fallow system using the Daycent model

USDA-ARS?s Scientific Manuscript database

Crop management practices that contribute to soil organic carbon (SOC) sequestration can improve productivity and long-term sustainability. We present a modeling study on influence of (>80 years) various long-term crop residue and nutrient management practices on SOC dynamics under conventional and ...

Better long-term management enhances soil C and N stocks

USDA-ARS?s Scientific Manuscript database

Traditional practices, such as conventional tillage with crop–fallow, have reduced dryland soil carbon and nitrogen over the last several decades by 30 to 50% of their original levels in the northern Great Plains. Improved management practices are needed to restore carbon and nitrogen levels and sus...

Failure of fallow deer (Dama dama) to develop chronic wasting disease when exposed to a contaminated environment and infected mule deer (Odocoileus hemionus).

PubMed

Rhyan, Jack C; Miller, Michael W; Spraker, Terry R; McCollum, Matt; Nol, Pauline; Wolfe, Lisa L; Davis, Tracy R; Creekmore, Lynn; O'Rourke, Katherine I

2011-07-01

We monitored a herd of fallow deer (Dama dama) for evidence of prion infection for 7 yr by periodic postmortem examination of animals from the herd. The fallow deer were exposed to the chronic wasting disease (CWD) agent from mule deer by living in a paddock considered contaminated with infectivity from its history of housing CWD infected deer and, after the first year of the study, by comingling with infected mule deer (Odocoileus hemionus). At least 8 of 12 mule deer serving as sentinels for prion transmission and 25 additional mule deer serving as sources of infectivity developed clinical CWD or were otherwise confirmed to be infected with CWD via lymphoid tissue immunohistochemistry (IHC). In contrast, none of the 41 exposed fallow deer showed clinical signs suggestive of CWD, IHC staining of disease-associated prion in lymphoid or brain tissues, or evidence of spongiform degeneration in sections of brain stem at the level of the obex when sampled 18 mo to 7 yr after entering the mule deer paddock. The absence of clinical disease and negative IHC results in fallow deer housed in the same contaminated paddock for up to 7 yr and almost continuously exposed to CWD-infected mule deer for up to 6 yr suggests a species barrier or other form of resistance preventing fallow deer infection by the CWD agent or delaying progression of the disease in this species.

[Effect of tillage system on soil animal, microorganism and enzyme activity in paddy field].

PubMed

Gao, Ming; Zhou, Baotong; Wei, Chaofu; Xie, Deti; Zhang, Lei

2004-07-01

A long-term experiment showed that under ridge-no-tillage, the amount of soil animal in 0 - 20 cm layer was 14700 ind. x m(-2), while under no-tillage and fallow in winter, paddy-upland rotation, and conventional tillage, it was 10450, 7950 and 6275 ind. x m(-2), respectively. Soil microbial biomass and microbial biomass N were more in spring and autumn, and less in summer. Soil enzyme activity was higher in surface soil layer and lower in bottom soil layer. The amount of soil animal, microbial biomass and microbial biomass N and soil enzyme activity was in order of ridge-no-tillage > paddy-upland rotation > no-tillage and fallow in winter > conventional tillage. The results also indicated that ridge-no-tillage was advantageous to improve soil ecological environment and soil fertility in paddy field.

The Fallow Season

ERIC Educational Resources Information Center

Spears, Harold

1972-01-01

If the Department of Agriculture can pay farmers for permitting part of their land to lie fallow each year to limit the production of grain, why isn't it sensible to pay professors to limit the production and dispersion of ideas? (Author)

Using organic matter to increase soil fertility in Burundi: potentials and limitations

NASA Astrophysics Data System (ADS)

Kaboneka, Salvator

2015-04-01

Agriculture production in Burundi is dominated by small scale farmers (0.5 ha/household) who have only very limited access to mineral inputs. In the past, farmers have relied on fallow practices combined with farm yard manures to maintain and improve soil fertility. However, due to the high population growth and high population density (370/km²), fallow practices are nowadays no longer feasible, animal manures cannot be produced in sufficient quantities to maintain soil productivity and food insecurity has become a quasi permanent reality. Most Burundian soils are characterized by 1:1 types of clay minerals (kaolinite) and are acidic in nature. Such soils are of very low cation exchange capacity (CEC). To compare the effect of % clays and % organic matter (% C), correlations tests have been conducted between the two parameters and the CEC. It was found that in high altitude kaolinitic and acidic soils, CEC was highly correlated to % C and less correlated to % clay, suggesting that organic matter could play an important role in improving fertility and productivity of these soils. Based on these findings, additional studies have been conducted to evaluate the fertilizer and soil amendment values of animal manures (cattle, goat, chicken), and leguminous (Calliandra calothyrsus, Gliricidia sepium, Senna simea, Senna spectabilis) and non-leguminous (Tithonia diversifolia) foliar biomass. It was observed that chicken manure significantly reduces Al3+ levels in acidic soils, while Tithonia diversifolia outperforms in nutrient releases compared to the commonly known leguminous agroforestry shrubs and trees indicated above. Although the above mentioned organic sources can contribute to the soil nutrients supply, the quantities potentially available on farm are generally small. The only solution is to supplement these organic sources with other organic sources (compost, organic household waste), chemical fertilizers and mineral amendments (lime) to achieve Integrated Soil Fertility Management. The amendments with inorganic minerals must be on the one hand as specific as possible to function as a real site-specific fertilizer, on the other hand it should be a generic blend to make it less expensive. This is a dilemma, and requires new ways of balancing organic matter and nutrients in the soils. Key words: Kaolinitic and acidic soils, CEC, Organic matter, animal manures, foliar biomass.

Area contact networks and the spatio-temporal spread of infectious salmon anemia virus (ISAV) in Chile.

PubMed

Gustafson, L; Remmenga, M; Sandoval Del Valle, O; Ibarra, R; Antognoli, M; Gallardo, A; Rosenfeld, C; Doddis, J; Enriquez Sais, R; Bell, E; Lara Fica, M

2016-03-01

Area management, the coordination of production and biosecurity practices across neighboring farms, is an important disease control strategy in aquaculture. Area management in aquaculture escalated in prominence in response to outbreaks of infectious salmon anemia (ISA) internationally. Successes in disease control have been attributed to the separation achieved through area-level synchronized stocking, fallowing, movement restrictions, and fomite or pest control. Area management, however, is costly; often demanding extra biosecurity, lengthy or inconveniently timed fallows, and localization of equipment, personnel, and services. Yet, this higher-order organizational structure has received limited epidemiologic attention. Chile's National Fisheries and Aquaculture Service instigated area management practices in response to the 2007 emergence of ISA virus (ISAV). Longitudinal data simultaneously collected allowed retrospective evaluation of the impact of component tenets on virus control. Spatiotemporal analyses identified hydrographic linkages, shared ports, and fish transfers from areas with recent occurrence of ISAV as the strongest predictors of virus spread between areas, though specifics varied by ISAV type (here categorized as HPR0 for the non-virulent genotypes, and HPRv otherwise). Hydrographic linkages were most predictive in the period before implementation of enhanced biosecurity and fallowing regulations, suggesting that viral load can impact spread dynamics. HPR0 arose late in the study period, so few HPRv events were available by which to explore the hypothesis of HPR0 as progenitor of outbreaks. However, spatiotemporal patterns in HPRv occurrence were predictive of subsequent patterns in HPR0 detection, suggesting a parallel, or dependent, means of spread. Better data precision, breadth and consistency, common challenges for retrospective studies, could improve model fit; and, for HPR0, specification of diagnostic test accuracy would improve interpretation. Published by Elsevier B.V.

Improving Oil Palm Classification in the Peruvian Amazon by Combining Active and Passive Remote Sensing Data

NASA Astrophysics Data System (ADS)

Gutierrez-Velez, V. H.; DeFries, R. S.

2011-12-01

Oil palm expansion has led to clearing of extensive forest areas in the tropics. However quantitative assessments of the magnitude of oil palm expansion to deforestation have been challenging due in large part to the limitations presented by conventional optical data sets for discriminating plantations from forests and other tree cover vegetations. Recently available information from active remote sensors has opened the possibility of using these data sources to overcome these limitations. The purpose of this analysis is to evaluate the accuracy of oil palm classification when using ALOS/PALSAR active satellite data in conjunction with Landsat information, compared to the use of Landsat data only. The analysis takes place in a focused region around the city of Pucallpa in the Ucayali province of the Peruvian Amazon for the year 2010. Oil palm plantations were separated in five categories consisting of four age classes (0-3, 3-5, 5-10 and > 10 yrs) and an additional class accounting for degraded plantations older than 15 yr. Other land covers were water bodies, unvegetated land, short and tall grass, fallow, secondary vegetation, and forest. Classifications were performed using random forests. Training points for calibration and validation consisted of 411 polygons measured in areas representative of the land covers of interest and totaled 6,367 ha. Overall classification accuracy increased from 89.9% using only Landsat data sets to 94.3% using both Landast and ALOS/PALSAR. Both user's and producer's accuracy increased in all classes when using both data sets except for producer's accuracy in short grass which decreased by 1%. The largest increase in user's accuracy was obtained in oil palm plantations older than 10 years from 62 to 80% while producer's accuracy improved the most in plantations in age class 3-5 from 63 to 80%. Results demonstrate the suitability of data from ALOS/PALSAR and other active remote sensors to improve classification of oil palm plantations in age classes and discriminate them from other land covers. Results suggest a potential for improving discrimination of other tree cover types using a combination of active and conventional optical remote sensors.

Simulating CH4 and N2O emissions from direct-seeded rice systems using the DeNitrification DeComposition (DNDC) model

NASA Astrophysics Data System (ADS)

Simmonds, M.; Li, C.; Lee, J.; Six, J.; Van Kessel, C.; Linquist, B.

2015-12-01

Process-based modeling of CH4 and N2O emissions from rice fields is a practical tool for conducting greenhouse gas inventories and estimating mitigation potentials of alternative practices at the scales of management and policy-making. However, few studies have evaluated site-level model performance in side-by-side field trials of various management practices during both the growing season and fallow periods. We empirically evaluated the DeNitrification-DeComposition (DNDC) model for estimating CH4 and N2O fluxes in California rice systems under varying management (N fertilizer application rate, type of seeding system, fallow period straw and water management), soil environments, and weather conditions. Five and nine site-year combinations were used for calibration and validation, respectively. The model was parameterized for two cultivars, M206 and Koshihikari, and able to simulate 30% and 78% of the measured variation in yields, respectively. A major strength of DNDC was in estimating general site-level seasonal CH4 emissions (R2 = 0.85). However, a major limitation was in simulating finer resolution of differences in CH4 emissions (or lack thereof) among side-by-side management treatments (range of 0.2-465% relative absolute deviation). Additionally, DNDC did not satisfactorily simulate fallow period CH4 emissions, or seasonal and fallow period N2O emissions across all sites with the exception of a few cases. Specifically, simulated CH4 emissions were oversensitive to fertilizer N rates, but lacked sensitivity to the type of seeding system and prior fallow period straw management. Additionally, N2O emissions were oversensitive to fertilizer N rates and field drainage. Sensitivity analysis showed that CH4 emissions were highly sensitive to changes in the root to total plant biomass ratio. Overall, uncertainty in model predictions was attributed to uncertainty in both the input parameters due to in-field spatiotemporal variability of soil properties, and in the model structure (e.g., genotype by environment interactions, clay effects, and simulation routines for field drainage, and diffusion and ebullition of gasses). These findings have implications for model-directed field research that could improve model uncertainty for application at larger spatial scales.

Herbicide options for suppressing bermudagrass in sugarcane

USDA-ARS?s Scientific Manuscript database

Bermudagrass is a problematic weed in Louisiana sugarcane. The most effective herbicide options are limited to the fallow period prior to planting. Frequently, efforts to eliminate bermudagrass from fields during the fallow season are unsuccessful. This subjects newly planted sugarcane to competitio...

The structure of microbial community in aggregates of a typical chernozem aggregates under contrasting variants of its agricultural use

NASA Astrophysics Data System (ADS)

Ivanova, E. A.; Kutovaya, O. V.; Tkhakakhova, A. K.; Chernov, T. I.; Pershina, E. V.; Markina, L. G.; Andronov, E. E.; Kogut, B. M.

2015-11-01

The taxonomic structure of microbiomes in aggregates of different sizes from typical chernozems was investigated using sequencing of the 16S rRNA gene. The aggregate fractions of <0.25, 2-5, and >7 mm obtained by sieving of the soil samples at natural moisture were used for analysis. The highest prokaryote biomass (bacteria, archaea) was determined in the fractions <0.25 and aggregates 2-5 mm; the bacterial and archaeal biomass decreased in the following series: fallow > permanent black fallow > permanent winter wheat. The greatest number of fungi was recorded in the fraction <0.25 mm from the soils of the permanent black fallow and in all the studied aggregate fractions in the variant with permanent wheat. The system of agricultural use affected more significantly the structure of the prokaryote community in the chernozem than the size of aggregate fractions did. The most diverse microbial community was recorded in the soil samples of the fallow; the statistically significant maximums of the Shannon diversity indices and indices of phylogenetic diversity (PD) were recorded in the fractions <0.25 and 2-5 mm from the fallow soil. On the whole, the fine soil fractions (<0.25 mm) were characterized by higher diversity indices in comparison with those of the coarser aggregate fractions.

Tropical rotation crops influence nematode densities and vegetable yields.

PubMed

McSorley, R; Dickson, D W; de Brito, J A; Hochmuth, R C

1994-09-01

The effects of eight summer rotation crops on nematode densities and yields of subsequent spring vegetable crops were determined in field studies conducted in north Florida from 1991 to 1993. The crop sequence was as follows: (i) rotation crops during summer 1991; (ii) cover crop of rye (Secale cereale) during winter 1991-92; (iii) 'Lemondrop L' squash (Cucurbita pepo) during spring 1992; (iv) rotation crops during summer 1992; (v) rye during winter 1992-93; (vi) 'Classic' eggplant (Solanum melongena) during spring 1993. The eight summer crop rotation treatments were as follows: 'Hale' castor (Ricinus communis), velvetbean (Mucuna deeringiana), sesame (Sesamum indicum), American jointvetch (Aeschynomene americana), weed fallow, 'SX- 17' sorghum-sudangrass (Sorghum bicolor x S. sudanense), 'Kirby' soybean (Glycine max), and 'Clemson Spineless' okra (Hibiscus esculentus) as a control. Rotations with castor, velvetbean, American jointvetch, and sorghum-sudangrass were most effective in maintaining the lowest population densities of Meloidogyne spp. (a mixture of M. incognita race 1 and M. arenaria race 1), but Paratrichodorus minor built up in the sorghum-sudangrass rotation. Yield of squash was lower (P

Shea (Vitellaria paradoxa Gaertn C. F.) fruit yield assessment and management by farm households in the Atacora district of Benin

PubMed Central

Villamor, Grace B.; Nyarko, Benjamin Kofi; Wala, Kperkouma; Akpagana, Koffi

2018-01-01

Vitellaria paradoxa (Gaertn C. F.), or shea tree, remains one of the most valuable trees for farmers in the Atacora district of northern Benin, where rural communities depend on shea products for both food and income. To optimize productivity and management of shea agroforestry systems, or "parklands," accurate and up-to-date data are needed. For this purpose, we monitored120 fruiting shea trees for two years under three land-use scenarios and different soil groups in Atacora, coupled with a farm household survey to elicit information on decision making and management practices. To examine the local pattern of shea tree productivity and relationships between morphological factors and yields, we used a randomized branch sampling method and applied a regression analysis to build a shea yield model based on dendrometric, soil and land-use variables. We also compared potential shea yields based on farm household socio-economic characteristics and management practices derived from the survey data. Soil and land-use variables were the most important determinants of shea fruit yield. In terms of land use, shea trees growing on farmland plots exhibited the highest yields (i.e., fruit quantity and mass) while trees growing on Lixisols performed better than those of the other soil group. Contrary to our expectations, dendrometric parameters had weak relationships with fruit yield regardless of land-use and soil group. There is an inter-annual variability in fruit yield in both soil groups and land-use type. In addition to observed inter-annual yield variability, there was a high degree of variability in production among individual shea trees. Furthermore, household socioeconomic characteristics such as road accessibility, landholding size, and gross annual income influence shea fruit yield. The use of fallow areas is an important land management practice in the study area that influences both conservation and shea yield. PMID:29346406

Shea (Vitellaria paradoxa Gaertn C. F.) fruit yield assessment and management by farm households in the Atacora district of Benin.

PubMed

Aleza, Koutchoukalo; Villamor, Grace B; Nyarko, Benjamin Kofi; Wala, Kperkouma; Akpagana, Koffi

2018-01-01

Vitellaria paradoxa (Gaertn C. F.), or shea tree, remains one of the most valuable trees for farmers in the Atacora district of northern Benin, where rural communities depend on shea products for both food and income. To optimize productivity and management of shea agroforestry systems, or "parklands," accurate and up-to-date data are needed. For this purpose, we monitored120 fruiting shea trees for two years under three land-use scenarios and different soil groups in Atacora, coupled with a farm household survey to elicit information on decision making and management practices. To examine the local pattern of shea tree productivity and relationships between morphological factors and yields, we used a randomized branch sampling method and applied a regression analysis to build a shea yield model based on dendrometric, soil and land-use variables. We also compared potential shea yields based on farm household socio-economic characteristics and management practices derived from the survey data. Soil and land-use variables were the most important determinants of shea fruit yield. In terms of land use, shea trees growing on farmland plots exhibited the highest yields (i.e., fruit quantity and mass) while trees growing on Lixisols performed better than those of the other soil group. Contrary to our expectations, dendrometric parameters had weak relationships with fruit yield regardless of land-use and soil group. There is an inter-annual variability in fruit yield in both soil groups and land-use type. In addition to observed inter-annual yield variability, there was a high degree of variability in production among individual shea trees. Furthermore, household socioeconomic characteristics such as road accessibility, landholding size, and gross annual income influence shea fruit yield. The use of fallow areas is an important land management practice in the study area that influences both conservation and shea yield.

Coupling life-cycle assessment and the RothC model to estimate the carbon footprint of green manure-based wheat production in China.

PubMed

Yao, Zhiyuan; Zhang, Dabin; Yao, Pengwei; Zhao, Na; Liu, Na; Zhai, Bingnian; Zhang, Suiqi; Li, Yangyang; Huang, Donglin; Cao, Weidong; Gao, Yajun

2017-12-31

Reducing the carbon footprint (CF) of crop production is an efficient way to mitigate climate change. Growing legume green manure (LGM) instead of summer fallow may achieve this goal by lowering synthetic nitrogen (N) fertilizer needs and replenishing the depleted soil carbon (C) pool. The Rothamsted Carbon (RothC) model was incorporated into the Life-Cycle Assessment (LCA) to evaluate the present and projected CFs of green manure-based wheat production systems in dryland agriculture on the Loess Plateau of China. The field study included four main treatments (Huai bean, soybean and mung bean grown as green manure in summer and fallow as control) and four synthetic N rates (0, 108, 135 and 162kgNha -1 ) applied at wheat sowing. Soybean as LGM increased averaged wheat yield over 4 synthetic N rates by 8% compared with fallow (P<0.05), and synthetic N requirement was reduced by 33% without compromising the wheat yield for all the main treatments. Although LGM treatments had higher greenhouse gas (GHG) emissions from agricultural inputs, the greater amount of C inputs elevated the corresponding SOC stocks (SOCS) by 14-24% after 8years, thus significantly reducing the CF by 25-51% compared with fallow. The modelled SOCS equilibrium indicates that the CF for cropping systems with LGM will be 53-62% lower than fallow and 23-37% lower compared with their current level. In conclusion, introducing legume green manure instead of summer fallow is a highly efficient measure for persistent CF reduction, and coupling the RothC model and LCA is an alternative method to predict the long-term impact of different cropping systems on GHG emissions. Copyright © 2017 Elsevier B.V. All rights reserved.

Spatial and temporal dynamics of shifting cultivation in the middle-Amazonas river: Expansion and intensification.

PubMed

Jakovac, Catarina Conte; Dutrieux, Loïc Paul; Siti, Latifah; Peña-Claros, Marielos; Bongers, Frans

2017-01-01

Shifting cultivation is the main land-use system transforming landscapes in riverine Amazonia. Increased concentration of the human population around villages and increasing market integration during the last decades may be causing agricultural intensification. Studies have shown that agricultural intensification, i.e. higher number of swidden-fallow cycles and shorter fallow periods, reduces crop productivity of swiddens and the regrowth capacity of fallows, undermining the resilience of the shifting cultivation system as a whole. We investigated the temporal and spatial dynamics of shifting cultivation in Brazilian Amazonia to test the hypotheses that (i) agriculture has become more intensive over time, and (ii) patterns of land-use intensity are related to land accessibility and human population density. We applied a breakpoint-detection algorithm to Landsat time-series spanning three decades (1984-2015) and retrieved the temporal dynamics of shifting cultivation fields, which go through alternating phases of crop production (swidden) and secondary forest regrowth (fallow). We found that fallow-period length has decreased from 6.4 to 5.1 years on average, and that expansion over old-growth forest has slowed down over time. Shorter fallow periods and higher frequency of slash and burn cycles are practiced closer to residences and around larger villages. Our results indicate that shifting cultivation in riverine Amazonia has gone through a process of agricultural intensification in the past three decades. The resulting landscape is predominantly covered by young secondary forests (≤ 12 yrs old), and 20% of it have gone through intensive use. Reversing this trend and avoiding the negative consequences of agricultural intensification requires land use planning that accounts for the constraints of land use in riverine areas.

Spatial and temporal dynamics of shifting cultivation in the middle-Amazonas river: Expansion and intensification

PubMed Central

Dutrieux, Loïc Paul; Siti, Latifah; Peña-Claros, Marielos; Bongers, Frans

2017-01-01

Shifting cultivation is the main land-use system transforming landscapes in riverine Amazonia. Increased concentration of the human population around villages and increasing market integration during the last decades may be causing agricultural intensification. Studies have shown that agricultural intensification, i.e. higher number of swidden-fallow cycles and shorter fallow periods, reduces crop productivity of swiddens and the regrowth capacity of fallows, undermining the resilience of the shifting cultivation system as a whole. We investigated the temporal and spatial dynamics of shifting cultivation in Brazilian Amazonia to test the hypotheses that (i) agriculture has become more intensive over time, and (ii) patterns of land-use intensity are related to land accessibility and human population density. We applied a breakpoint-detection algorithm to Landsat time-series spanning three decades (1984–2015) and retrieved the temporal dynamics of shifting cultivation fields, which go through alternating phases of crop production (swidden) and secondary forest regrowth (fallow). We found that fallow-period length has decreased from 6.4 to 5.1 years on average, and that expansion over old-growth forest has slowed down over time. Shorter fallow periods and higher frequency of slash and burn cycles are practiced closer to residences and around larger villages. Our results indicate that shifting cultivation in riverine Amazonia has gone through a process of agricultural intensification in the past three decades. The resulting landscape is predominantly covered by young secondary forests (≤ 12 yrs old), and 20% of it have gone through intensive use. Reversing this trend and avoiding the negative consequences of agricultural intensification requires land use planning that accounts for the constraints of land use in riverine areas. PMID:28727828

Slow and ultra-rapid freezing protocols for cryopreserving mouflon (Ovis musimon) and fallow deer (Dama dama) epididymal sperm.

PubMed

Bóveda, P; Esteso, M C; Castaño, C; Toledano-Díaz, A; López-Sebastián, A; Muñiz, A; Prieto, P; Mejía, O; Ungerfeld, R; Santiago-Moreno, J

2018-05-01

This study examines the effectiveness of two methods for cryopreserving post-mortem epididymal sperm - conventional slow freezing employing a short equilibration time with glycerol, and ultra-rapid freezing - from the wild ruminant species Ovis musimon (mouflon) and Dama dama (fallow deer). A Tris-citric acid-glucose (TCG) + 12% egg yolk-based medium was used for the conventional slow freezing of the fallow deer sperm, whereas a Tes-Tris-glucose (TEST) + 6% egg yolk-based medium was used for the mouflon sperm. Glycerol was added to a final concentration of 5% to both media. The same diluents were used for ultra-rapid freezing but replacing the glycerol with 100 mM of sucrose. Sperm variables (motility, viability, acrosome integrity, membrane integrity, and morphological abnormalities) were analyzed before and after cryopreservation. Although values were generally better after the thawing of the conventionally cryopreserved sperm, total sperm motility (38.40 ± 4.44% in mouflon and 31.25 ± 3.37% in fallow deer) and total live sperm (47.19 ± 5.18% in mouflon and 43.13 ± 2.43% in fallow deer) were acceptable for the ultra-rapidly cooled sperm. Independent of the cryopreservation method, membrane integrity, acrosome integrity and the percentages of dead sperm and sperms with a damaged acrosome were better for the cryopreserved mouflon sperm than the fallow deer sperm (P < 0.05). Despite exerting a more harmful effect on sperm variables than conventional freezing, ultra-rapid freezing may be a useful alternative for the cryopreservation of these species' epididymal sperm in the field, as this simple technique does not require sophisticated equipment and expertise. Copyright © 2018 Elsevier B.V. All rights reserved.

An innovative cross-sectoral method for implementation of trade-off adaptation strategy assessment under climate change

NASA Astrophysics Data System (ADS)

Tsao, Jung-Hsuan; Tung, Ching-Pin; Liu, Tzu-Ming

2014-05-01

Climate change will increase sharp risks to the water and food supply in coming decades. Although impact assessment and adaptation evaluation has been discussed a lot in recent years, the importance of adaptation implement should not be ignored. In Taiwan, and elsewhere, fallow is an option of adaptation strategy under climate change. Fallow would improve the water scarcity of domestic use, but the food security might be threatened. The trade-off effects of adaptation actions are just like the side effects of medicine which cannot be avoided. Thus, managing water resources with an integrated approach will be urgent. This study aims to establish a cross-sectoral framework for implementation the trade-off adaptation strategy. Not only fallow, but also other trade-off strategy like increasing the percentage of national grain self-sufficiency would be analyzed by a rational decision process. The recent percentage of grain self-sufficiency in Taiwan is around 32, which was decreasing from 53 thirty years ago. Yet, the goal of increasing grain self-sufficiency means much more water must be used in agriculture. In that way, domestic users may face the water shortage situation. Considering the conflicts between water supply and food security, the concepts from integrative negotiation are appropriate to apply. The implementation of trade-off adaptation strategies needs to start by quantifying the utility of water supply and food security were be quantified. Next, each side's bottom line can be found by BATNA (Best Alternative to a Negotiated Agreement) and ZOPA (Zone of Possible Agreement). ZOPA provides the entire possible outcomes, and BATNA ensures the efficiency of adaptation actions by moving along with Pareto frontier. Therefore, the optimal percentage of fallow and grain self-sufficiency can be determined. Furthermore, BATNA also provides the pathway step by step which can be a guideline of adaptation strategies. This framework allows analysts and stakeholder to systematically evaluate trade-off adaptation strategies and indicate the priority to implement.

Crop and varietal diversification of rainfed rice based cropping systems for higher productivity and profitability in Eastern India

PubMed Central

Panda, B. B.; Raja, R.; Singh, Teekam; Tripathi, R.; Shahid, M.; Nayak, A. K.

2017-01-01

Rice-rice system and rice fallows are no longer productive in Southeast Asia. Crop and varietal diversification of the rice based cropping systems may improve the productivity and profitability of the systems. Diversification is also a viable option to mitigate the risk of climate change. In Eastern India, farmers cultivate rice during rainy season (June–September) and land leftovers fallow after rice harvest in the post-rainy season (November–May) due to lack of sufficient rainfall or irrigation amenities. However, in lowland areas, sufficient residual soil moistures are available in rice fallow in the post-rainy season (November–March), which can be utilized for raising second crops in the region. Implementation of suitable crop/varietal diversification is thus very much vital to achieve this objective. To assess the yield performance of rice varieties under timely and late sown conditions and to evaluate the performance of dry season crops following them, three different duration rice cultivars were transplanted in July and August. In dry season several non-rice crops were sown in rice fallow to constitute a cropping system. The results revealed that tiller occurrence, biomass accumulation, dry matter remobilization, crop growth rate, and ultimately yield were significantly decreased under late transplanting. On an average, around 30% yield reduction obtained under late sowing may be due to low temperature stress and high rainfall at reproductive stages of the crop. Dry season crops following short duration rice cultivars performed better in terms of grain yield. In the dry season, toria was profitable when sown earlier and if sowing was delayed greengram was suitable. Highest system productivity and profitability under timely sown rice may be due to higher dry matter remobilization from source to sink. A significant correlation was observed between biomass production and grain yield. We infer that late transplanting decrease the tiller occurrence and assimilate remobilization efficiency, which may be responsible for the reduced grain yield. PMID:28437487

Crop and varietal diversification of rainfed rice based cropping systems for higher productivity and profitability in Eastern India.

PubMed

Lal, B; Gautam, Priyanka; Panda, B B; Raja, R; Singh, Teekam; Tripathi, R; Shahid, M; Nayak, A K

2017-01-01

Rice-rice system and rice fallows are no longer productive in Southeast Asia. Crop and varietal diversification of the rice based cropping systems may improve the productivity and profitability of the systems. Diversification is also a viable option to mitigate the risk of climate change. In Eastern India, farmers cultivate rice during rainy season (June-September) and land leftovers fallow after rice harvest in the post-rainy season (November-May) due to lack of sufficient rainfall or irrigation amenities. However, in lowland areas, sufficient residual soil moistures are available in rice fallow in the post-rainy season (November-March), which can be utilized for raising second crops in the region. Implementation of suitable crop/varietal diversification is thus very much vital to achieve this objective. To assess the yield performance of rice varieties under timely and late sown conditions and to evaluate the performance of dry season crops following them, three different duration rice cultivars were transplanted in July and August. In dry season several non-rice crops were sown in rice fallow to constitute a cropping system. The results revealed that tiller occurrence, biomass accumulation, dry matter remobilization, crop growth rate, and ultimately yield were significantly decreased under late transplanting. On an average, around 30% yield reduction obtained under late sowing may be due to low temperature stress and high rainfall at reproductive stages of the crop. Dry season crops following short duration rice cultivars performed better in terms of grain yield. In the dry season, toria was profitable when sown earlier and if sowing was delayed greengram was suitable. Highest system productivity and profitability under timely sown rice may be due to higher dry matter remobilization from source to sink. A significant correlation was observed between biomass production and grain yield. We infer that late transplanting decrease the tiller occurrence and assimilate remobilization efficiency, which may be responsible for the reduced grain yield.

Aggregate distribution and associated organic carbon influenced by cover crops

NASA Astrophysics Data System (ADS)

Barquero, Irene; García-González, Irene; Benito, Marta; Gabriel, Jose Luis; Quemada, Miguel; Hontoria, Chiquinquirá

2013-04-01

Replacing fallow with cover crops during the non-cropping period seems to be a good alternative to diminish soil degradation by enhancing soil aggregation and increasing organic carbon. The aim of this study was to analyze the effect of replacing fallow by different winter cover crops (CC) on the aggregate distribution and C associated of an Haplic Calcisol. The study area was located in Central Spain, under semi-arid Mediterranean climate. A 4-year field trial was conducted using Barley (Hordeum vulgare L.) and Vetch (Vicia sativa L.) as CC during the intercropping period of maize (Zea mays L.) under irrigation. All treatments were equally irrigated and fertilized. Maize was directly sown over CC residues previously killed in early spring. Composite samples were collected at 0-5 and 5-20 cm depths in each treatment on autumn of 2010. Soil samples were separated by wet sieving into four aggregate-size classes: large macroaggregates ( >2000 µm); small macroaggregates (250-2000 µm); microaggregates (53-250 µm); and < 53 µm (silt + clay size). Organic carbon associated to each aggregate-size class was measured by Walkley-Black Method. Our preliminary results showed that the aggregate-size distribution was dominated by microaggregates (48-53%) and the <53 µm fraction (40-44%) resulting in a low mean weight diameter (MWD). Both cover crops increased aggregate size resulting in a higher MWD (0.28 mm) in comparison with fallow (0.20 mm) in the 0-5 cm layer. Barley showed a higher MWD than fallow also in 5-20 cm layer. Organic carbon concentrations in aggregate-size classes at top layer followed the order: large macroaggregates > small macroaggregates > microaggregates > silt + clay size. Treatments did not influence C concentration in aggregate-size classes. In conclusion, cover crops improved soil structure increasing the proportion of macroaggregates and MWD being Barley more effective than Vetch at subsurface layer.

Evidence of hydraulic lift for pre-rainy season leaf out and dry-season stem water enrichment in Sclerocarya birrea, a tropical agroforestry tree

NASA Astrophysics Data System (ADS)

Ceperley, Natalie; Mande, Theophile; Rinaldo, Andrea; Parlange, Marc B.

2014-05-01

We use stable isotopes of water as tracers to follow water use by five Sclerocarya birrea trees in a catchment in South Eastern Burkina Faso interspersed with millet fields, gallery forest, Sudanian savanna, and fallow fields. Isotopic ratios were determined from water extracted from stems of the trees and sub-canopy soil of two of them, while nearby ground water, precipitation, and surface water was sampled weekly. A unique configuration of sensors connected with a wireless sensor network of meteorological stations measured sub-canopy shading, the temperature and humidity in the canopy, through-fall, and soil moisture under two of the trees. Both water extracted from sap and water extracted from soil is extremely enriched in the dry season, but drop to levels close to the ground water in February or March, which coincides with the growth of leaves. Dates of leaf out were confirmed by changes in δDH and δO18 concentrations of water, photographic documentation & pixel analysis, and analysis of sub-canopy radiation and proceeded the rise in humidity and flow that was later detected in the sub-canopy soil, the trunk of the tree (sap-flow), and atmosphere (canopy VPD). Examination of the isotopic signature suggests that size of tree plays an important role in duration and timing of this leaf-out as well as the degree of enrichment during the peak of the dry season. Further examination of the isotopic signatures of the roots suggested that the trees are performing hydraulic redistribution, or lifting the ground water and "sharing it" with the soil in the rooting zone in the dry season. The enriched level of xylem in this case is a product of water loss, and enrichment, along the travel path of the water from the roots to the tip of the stem, as evidenced by the variation according to size of tree. Vapor pressure deficit, soil water, and soil moisture interactions support this picture of interacting controls, separate from hydrologic triggers on the water movement in the tree.

Waterbird nest density and nest survival in rice fields of southwestern Louisiana

USGS Publications Warehouse

Pierluissi, S.; King, Sammy L.; Kaller, Michael D.

2010-01-01

Rice fields in southwestern Louisiana provide breeding habitat for several waterbird species; however, little is known about nest density, nest survival and the importance of landscape context of rice fields in determining breeding activity. In 2004, 42 rice fields were searched for nests, and 40 were searched in 2005. Land uses surrounding rice fields, including irrigation canals, trees, crawfish ponds, rice, fallow and soybean fields, were examined to determine influence on nest density and survival. Nest densities were 13.5-16.0 nests/km2 for Purple Gallinules (Porphyrio martinica), 3.0-13.7 nests/km2 for Fulvous Whistling Ducks (Dendrocygna bicolor), 2.6-2.8 nests/km2 for Common Moorhens (Gallinula chloropus), 0.3-0.92 nests/km2 for Least Bitterns (Ixobrychus exilisi) and 0-0.6 nests/km2 for Mottled Ducks (Anas fulvigula). Nest survival was 52-79% for Purple Gallinules and 39-43% for Fulvous Whistling Ducks. Apparent nest success of Common Moorhens was 73-75%, 83% for Least Bitterns and 33% for Mottled Ducks. Purple Gallinule and Common Moorhen nest densities were highest in fields with a larger proportion of irrigation canals surrounding rice fields. Purple Gallinule nest densities were greater in fields devoid of trees and landscapes dominated by rice fields and pasture, rather than landscapes containing soybean fields and residential areas. Fulvous Whistling Duck nest densities were higher in agriculturally-dominated landscapes with few trees.

Assessing Land Management Changes and Population Dynamics in Central Burkina Faso in Response to Climate Change.

NASA Astrophysics Data System (ADS)

Kabore Bontogho, P. E.; Boubacar, I.; Afouda, A.; Joerg, H.

2015-12-01

Assessing landscape and population's dynamics at watershed level contribute to address anthropogenic aspect of climate change issue owing to the close link between LULC and climate changes. The objective of this study is to explore the dependencies of population to land management changes in Massili basin (2612 km²) located in central Burkina Faso. A set of three satellite scenes was acquired for the years 1990 (Landsat 7 ETM), 2002 (Landsat 7 ETM+) and 2013 (Landsat 8 OLI/TIRS) from the Global Land Cover Facility's (GLCF) website. Census data were provided by the National institute of statistics and demographic (INSD). The satellites images were classified using object-oriented classification method which was supported by historic maps and field data. Those were collected in order to allow for class definition, verification and accuracy assessments. Based on the developed land use maps, change analysis was carried out using post classification comparison in GIS. Finally, derived land use changes were compared with census data in order to explore links between population dynamics and the land use changes. It was found in 1990 that Massili watershed LULC was dominated by Tree/shrub savannah (69%, 1802.28 km2 ), Farm/Fallow was representing 22%, Gallery forest (4%), Settlement (3%), Barre soil (1%), Water bodies (1%). In 2002, the major landscape was Farm (54%). Tree/Shrub savannas were reduced to 36% while the Gallery Forest was decreased to1% of the basin area. The situation has also slightly changed in 2013 with an increase of the area devoted to farm/fallow and settlement at a rate of 3% and Gallery forest has increased to 4%. The changes in land use are in agreement with a notable increase in population. The analysis of census data showed that the number of inhabitants increased from 338 inhabitants per km2 in 1990 to 1150 inhabitants per km2 in 2013. As shown by statistical analysis (Kendall correlation tau=0.9), there is a close relation between both dynamics.

Replacing fallow with continuous cropping reduces crop water productivity of semiarid wheat

USDA-ARS?s Scientific Manuscript database

Water supply frequently limits crop yield in semiarid cropping systems; water deficits can restrict yields in drought-affected subhumid regions. In semiarid wheat (Triticum aestivumL.)-based cropping systems, replacing an uncropped fallow period with a crop can increase precipitation use efficiency ...

Probabilities of having minimum amounts of available soil water at wheat planting

USDA-ARS?s Scientific Manuscript database

Winter wheat (Triticum aestivum L.)-fallow (WF) remains a prominent cropping system throughout the Central Great Plains despite documentation confirming the inefficiency of precipitation storage during the second summer fallow period. Wheat yield is greatly influenced by available soil water at plan...

Integrating sheep grazing into wheat-fallow systems: Crop yield and soil properties

USDA-ARS?s Scientific Manuscript database

The two predominant systems for weed management in summer fallow are tillage with a field cultivator or multiple applications of broad spectrum herbicides with zero tillage. Both systems are based on substantial use of off farm resources. Strategic grazing of sheep may allow grain growers to more ...

Wheat yield and yield stability of eight dryland crop rotations

USDA-ARS?s Scientific Manuscript database

The winter wheat (Triticum aestivum L.)-fallow (WF) dryland production system employed in the Central Great Plains has evolved in the past 40 years to include a diversity of other crops, with a reduction in fallow frequency. Wheat remains the base crop for essentially all cropping systems. Decisions...

Kenaf (Hibiscus cannabinus) and cowpea (Vigna unguiculata) as sugarcane cover crops

USDA-ARS?s Scientific Manuscript database

A Louisiana sugarcane field is typically replanted every four years due to declining yields, and, although, it is a costly process, it is both necessary and an opportunity to maximize the financial return during the next four year cropping cycle. Fallow planting systems (FPS) during the fallow perio...

Population, desert expanding.

PubMed

1992-01-01

The conditions of desert expansion in the Sahara are highlighted. On the southern border the desert is growing at a rate of 3-6 miles/year. This growth is encroaching on arable land in Ethiopia and Mauritania. The region loses up to 28,000 sq miles/year of farmland. 33% of Africa's fertile land is threatened. Land-use patterns are responsible for the deterioration of the soil. Traditional practices are not effective because the practices are not suitable for permanent farming. Farmers also have stopped environmentally sound practices such as letting the fields remain fallow in order to renew soil fertility. Nomads overgraze areas before moving on. A recent study by the World Bank's Africa Region Office was released; the report details some of the links between rapid population growth, poor agricultural performance, and environmental degradation. Soil conditions are such that valuable topsoil is blow away by the wind because the layer is too thin. Vegetation at the desert's edge is used for cooking purposes or for heating fuel. Tropical and savannah areas are depleted when tree replacement is inadequate. Only 9 trees are planted for every 100 removed. The report emphasized the role of women and children in contributing to population pressure by increased fertility. Women's work load is heavy and children are a help in alleviating some of the burden of domestic and agricultural work. There is hope in meeting demographic, agricultural, food security, and environmental objectives over the next 30 years if the needs of women are met. The needs include access to education for young women, lessening the work loads of women, and decreasing child mortality through improved health care and access to safe water.

Floristic evolution in an agroforestry system cultivation in Southern Brazil.

PubMed

Silva, Luís C R; Machado, Sebastião A; Galvão, Franklin; Figueiredo, Afonso

2016-06-07

Bracatinga (Mimosa scabrella Bentham) is an important pioneer tree species in Ombrophylous Mixed Forest of Brazil and is widely used as an energy source. In traditional agroforestry systems, regeneration is induced by fire, then pure and dense stands known as bracatinga stands (bracatingais) are formed. In the first year, annual crops are intercalated with the seedlings. At that time the seedlings are thinned, then the stands remain at a fallow period and cut at seven years old. The species is very important mainly for small landowners. We studied the understory species that occur naturally during the succession over several years in order to manage them rationally in the future and maintain the natural vegetation over time. Three to 20 year-old Bracatinga stands were sampled between 1998 and 2011. All tree species with diameter at breast height (DBH) ≥ 5 cm were measured.The floristic evolution was assessed with respect to Sociability Index, the Shannon Diversity Index and the Pielou Evenness Index. Graphs of rank/abundance over different age groups were evaluated using the Kolmogorov-Smirnov test. We identified 153 species dispersed throughout the understory and tend to become aggregated over time.

Contributions to improve fallow system in Yucatan State Mexico

Treesearch

Gabriel Uribe Valle; Juan Jiménez-Osornio; Roberto Dzib Echeverría

2006-01-01

More than 25 percent of earth warming can be attributes to deforestation practices such as crop rotations performed in southeast part of Mexico. In the Yucatan peninsula 20 percent of staple foods such as maize and beans are produced under slash and burn system. It has been practiced for many centuries by native Mayans however population pressure and food scarcity made...

Land use determinants of small mammal abundance and distribution in a plague endemic area of Lushoto District, Tanzania.

PubMed

Hieronimo, Proches; Kimaro, Didas N; Kihupi, Nganga I; Gulinck, Hubert; Mulungu, Loth S; Msanya, Balthazar M; Leirs, Herwig; Deckers, Jozef A

2014-07-01

Small mammals are considered to be involved in the transmission cycle of bubonic plague, still occurring in different parts of the world, including the Lushoto District in Tanzania. The objective of this study was to determine the relationship between land use types and practices and small mammal abundance and distribution. A field survey was used to collect data in three landscapes differing in plague incidences. Data collection was done both in the wet season (April-June 2012) and dry season (August-October 2012). Analysis of variance and Boosted Regression Trees (BRT) modelling technique were used to establish the relationship between land use and small mammal abundance and distribution. Significant variations (p ≤ 0.05) of small mammal abundance among land use types were identified. Plantation forest with farming, natural forest and fallow had higher populations of small mammals than the other aggregated land use types. The influence of individual land use types on small mammal abundance level showed that, in both dry and wet seasons, miraba and fallow tended to favour small mammals' habitation whereas land tillage practices had the opposite effect. In addition, during the wet season crop types such as potato and maize appeared to positively influence the distribution and abundance of small mammals which was attributed to both shelter and food availability. Based on the findings from this study it is recommended that future efforts to predict and map spatial and temporal human plague infection risk at fine scale should consider the role played by land use and associated human activities on small mammal abundance and distribution.

Climate change impacts on dryland cropping systems in the central Great Plains, USA

USDA-ARS?s Scientific Manuscript database

Agricultural systems models are essential tools to assess potential climate change (CC) impacts on crop production and help guide policy decisions. In this study, impacts of GCM projected CC on dryland crop rotations of wheat-fallow (WF), wheat-corn-fallow (WCF), and wheat-corn-millet (WCM) at Akro...

Introducing winter canola to the winter wheat-fallow region of the Pacific Northwest

USDA-ARS?s Scientific Manuscript database

Growers in the low-rainfall, winter wheat-fallow region of the Pacific Northwest are in need of an alternative crop to diversify their markets, manage pests, and increase wheat yields. Winter canola may be a viable crop option for growers in the region. However, agronomic research for winter canol...

Introducing Winter Canola in the Wheat-Fallow Region of North Central Washington

USDA-ARS?s Scientific Manuscript database

Approximately 60% of the cereal and grain legume production areas of the Pacific Northwest are characterized by the winter wheat/summer fallow system. This system is plagued by winter annual grass weeds such as jointed goatgrass, feral rye, and downy brome. Growers are becoming more interested in pr...

Effect of Crop Rotation on Meloidogyne spp. and Pratylenchus spp. Populations in Strawberry Fields in Taiwan

PubMed Central

Chen, P.; Tsay, T.T.

2006-01-01

Changes in population levels of Meloidogyne hapla, M. incognita, Pratylenchus coffeae, and P. penetrans were studied in 12 strawberry fields in the Dahu region of Taiwan. Ten potential rotation crops and two cultural practices were evaluated for their effect on nematode populations and influence on strawberry yield. Rotation with rice or taro and the cultural practice of flooding and bare fallowing for four months were found to reduce nematode soil populations to two or fewer nematodes per 100 ml soil. Average strawberry yields increased between 2.4% to 6.3% following taro compared to the bare fallow treatment. Corn suppressed M. incognita and M. hapla populations and resulted in an increased in strawberry yield compared to bare fallow. Other phytopathogens also present in these fields limited taro as the rotation choice for nematode management. Results of this research and economic analysis of the input requirements for various rotation crops, corn and bare fallow were recommended as the most appropriate rotation strategies for nematode management in strawberry in this region. PMID:19259538

Authenticity control of game meat products--a single method to detect and quantify adulteration of fallow deer (Dama dama), red deer (Cervus elaphus) and sika deer (Cervus nippon) by real-time PCR.

PubMed

Druml, Barbara; Grandits, Stephanie; Mayer, Walter; Hochegger, Rupert; Cichna-Markl, Margit

2015-03-01

This contribution presents a single real-time PCR assay allowing the determination of the deer content (the sum of fallow deer (Dama dama), red deer (Cervus elaphus) and sika deer (Cervus nippon)) in meat products to detect food adulteration. The PCR assay does not show cross-reactivity with 20 animal species and 43 botanical species potentially contained in game meat products. The limit of quantification is 0.5% for fallow deer and red deer and 0.1% for sika deer. The deer content in meat products is determined by relating the concentration obtained with the deer PCR assay to that obtained with a reference system which amplifies mammals and poultry DNA. The analysis of binary meat mixtures with pork, a meat mixture containing equal amounts of fallow deer, red deer and sika deer in pork and a model game sausage showed that the quantification approach is very accurate (systematic error generally <25%). Copyright © 2014 Elsevier Ltd. All rights reserved.

High oxidative capacity and type IIx fibre content in springbok and fallow deer skeletal muscle suggest fast sprinters with a resistance to fatigue

PubMed Central

Curry, Jennifer Wendy; Hohl, Rodrigo; Noakes, Timothy David; Kohn, Tertius Abraham

2012-01-01

SUMMARY Some wild antelopes are fast sprinters and more resistant to fatigue than others. This study therefore investigated two wild antelope species to better understand their reported performance capability. Muscle samples collected post mortem from the vastus lateralis and longissimus lumborum of fallow deer (Dama dama) and springbok (Antidorcas marsupialis) were analysed for myosin heavy chain isoform content, citrate synthase, 3-hydroxyacyl CoA dehydrogenase, phosphofructokinase, lactate dehydrogenase and creatine kinase activities. Cross-sectional areas, fibre type and oxidative capacities of each fibre type were determined in the vastus lateralis only. The predominant fibre type in both muscle groups and species were type IIX (>50%), with springbok having more type IIX fibres than fallow deer (P<0.05). Overall cross-sectional area was not different between the two species. The metabolic pathway analyses showed high glycolytic and oxidative capacities for both species, but springbok had significantly higher CS activities than fallow deer. Large variation and overlap in oxidative capacities existed within and between the fibre types. Some type IIX fibres presented with oxidative capacities similar to those from type I and IIA fibres. The data suggest that springbok and fallow deer are able sprint at >90 and 46 km h−1, respectively, partly from having large type IIX fibre contents and high glycolytic capacities. The high oxidative capacities also suggest that these animals may be able to withstand fatigue for long periods of time. PMID:22899533

Abundance of the tick Dermacentor reticulatus in an ecosystem of abandoned meadows: Experimental intervention and the critical importance of mowing.

PubMed

Bajer, Anna; Rodo, Anna; Alsarraf, Mohammed; Dwużnik, Dorota; Behnke, Jerzy M; Mierzejewska, Ewa J

2017-11-15

The effect of agricultural activities on the environment has been falling in many areas of Europe in recent years and the associated abandonment of crop fields, meadows and pastures may enable an increase in tick densities. In the present study we assessed whether regular mowing would have a negative effect on Dermacentor reticulatus populations and whether the cessation of regular mowing would cause an increase in abundance of D. reticulatus ticks. Two field experiments were conducted during a five-year period (2012-2016) in the Mazowieckie (Mazovia) region of Central Poland. Experiment 1: The long-term effect of mowing on tick population was tested in the meadow ecosystem of Stoski, an old fallow land plot that was mowed three times a year. Experiment 2: Neglecting the cultivation by abandonment of arable land was evaluated in Kury village. Four areas (2 experimental 'fallow lands', 2 control meadows) were selected. The first fallow land plot was a fenced off area comprising mostly of a horse pasture and the second fallow land plot was designated in an old abandoned orchard. At each site, ticks were collected in consecutive springs and autumns by dragging at least twice during each season from experimental and control areas. Altogether 1452 D. reticulatus ticks were collected and their densities were compared by multifactorial ANOVA. In the end of the first experiment, a significant decrease (6 times) in tick abundance was observed in the mowed area in comparison to old fallow land. In the end of the second experiment, tick abundance was three times higher in the experimental fallow lands in comparison to the control meadows. In conclusion it was found that regular mowing significantly reduced the density of questing D. reticulatus ticks in open areas. Cessation of mowing may enhance the number of ticks and the associated risk of acquiring tick-borne diseases. Copyright © 2017 Elsevier B.V. All rights reserved.

Soil CO2 emissions from Northern Andean páramo ecosystems: effects of fallow agriculture.

PubMed

Cabaneiro, Ana; Fernandez, Irene; Pérez-Ventura, Luis; Carballas, Tarsy

2008-03-01

The effects of fallow agriculture on soil organic matter (SOM) dynamics and CO2 emissions were assessed in the tropical Andean páramo ecosystem. Possible changes during the cultivation-fallow cycle were monitored in four areas of the Quebrada Piñuelas valley (Venezuela). Uncultivated soils and plots at different stages of a complete cultivation--fallow cycle were incubated, and SOM mineralization kinetics was determined. Soils exhibited a low SOM mineralization activity, total CO2 evolved never reaching 3% of soil carbon, pointing to a stabilized SOM. Potential soil CO2 effluxes differed significantly according to their plot aspect: northeast (NE)-aspect soils presented higher CO2 effluxes than southwest (SW)-aspect soils. Soil CO2 emissions decreased after ploughing as compared to virgin páramo; low CO2 effluxes were still observed during cropping periods, increasing progressively to reach the highest values after 4-5 y of fallow. In all cases, experimental C mineralization data was fitted to a double exponential kinetic model. High soil labile C pool variability was observed, and two different trends were identified: NE-oriented soils showed more labile C and a wider range of values than SW-facing soils. Labile C positively correlated with CO2 effluxes and negatively with its instantaneous mineralization rate. The instantaneous mineralization rate of the recalcitrant C pool positively correlated with %C evolved as CO2 and negatively with soil C and Al2O3 contents, suggesting the importance of aluminum on SOM stability. The CO2 effluxes from these ecosystems, as well as the proportion of soil C released to the atmosphere, seem to depend not only on the size of the labile C pool but also on the accessibility of the more stabilized SOM. Therefore, fallow agriculture produces moderate changes in SOM quality and temporarily alters the CO2 emission capacity of these soils.

Characterization of land surface energy fluxes in a tropical lowland rice paddy

NASA Astrophysics Data System (ADS)

Chatterjee, Dibyendu; Tripathi, Rahul; Chatterjee, Sumanta; Debnath, Manish; Shahid, Mohammad; Bhattacharyya, Pratap; Swain, Chinmaya Kumar; Tripathy, Rojalin; Bhattacharya, Bimal K.; Nayak, Amaresh Kumar

2018-04-01

A field experiment was conducted in 2015 to study the land surface energy fluxes from tropical lowland rice paddy in eastern India with an objective to determine the mass, momentum, and energy exchange rates between rice paddies and the atmosphere. All the land surface energy fluxes were measured by eddy covariance (EC) system (make Campbell Scientific) in dry season (DS, 1-125 Julian days), dry fallow (DF, 126-181 Julian days), wet season (WS, 182-324 Julian days), and wet fallow (WF, 325-365 Julian days). The rice was cultivated in dry season (January-May) and wet season (July-November) in low wet lands and the ground is kept fallow during the remainder of the year. Results showed that albedo varied from 0.09 to 0.24 and showed positive value from morning 6:00 h until evening 18:00 h. Mean soil temperature (T g) was highest in DF, while the skin temperature (T s) was highest in WS. Average Bowen ratio (B) ranged from 0.21 to 0.64 and large variation in B was observed during the fallow periods as compared to the cropping seasons. The magnitude of aerodynamic, canopy, and climatological resistances increased with the progress of cropping season and their magnitudes decreased during the end of both cropping seasons and found minimum during the fallow periods. At a constant vapor pressure deficit (VPD) at 0.16, 0.18, 0.15, and 0.43 kPa, latent heat flux (LE) initially increased, but later it tended to level off with an increase in VPD. The actual evapotranspiration (ETa) during both the cropping seasons was higher than the fallow period. This study can be used as a source of default values for many land surface energy fluxes which are required in various meteorological or air-quality models for rice paddies. A larger imbalance of energy was observed during the wet season as the energy is stored and perhaps advected in the fresh water.

Fallowing for Cottonwood Plantations: Benefits Carry to Rotation's End

Treesearch

John K. Francis

1982-01-01

Johnson grass and other weeds are so prolific in old fields on the Mississippi Delta that frequent cultivation is necessary during the first season to obtain acceptable survival of planted cottonwood. A number of site preparation treatments were tested as a means of increasing early survival and growth. Fallowing, essentially five diskings the summer before planting,...

The effect of fallow on Longidorus americanus, a nematode associated with stunting of loblolly pine seedlings in Georgia, USA

Treesearch

Stephen W. Fraedrich; Michelle M. Cram; Stanley J. Zarnoch

2005-01-01

Stunting of loblolly pine (Pinue taeda L.) seedlings, caused by Longidorus americanus, has been a problem at a Georgia (USA) nursery. Field and growth chamber studies were conducted to determine the survivability of the nematode in a fallow nursery soil. The population density of L. americanus decreased rapidly...

A Functional Trait Approach for Evaluation of Agroforestry Species Adaptation Potentiel to Changing Climate

NASA Astrophysics Data System (ADS)

Munson, A. D.; Marone, D.; Olivier, A.

2017-12-01

Traditional agroforestry systems have been used for generations in the Sahel region of Africa to assure local food security. However, an understanding of the functional ecology of these systems is lacking, which would contribute to assessing both the provision of current ecological services, and the potential for adaptation to global change. We have studied five native tree and shrub species across a transect of different soil types in the semi-arid zone of the Niayes region of Senegal, to document changes in above and belowground traits in response to soil and land use change. Root traits in particular influence access to limiting resources such as water and nutrients. We studied fine root depth distribution and specific root length (SRL) with soil depth of Acacia raddiana, Balanites aegyptiaca, Euphorbia balsamifera, Faidherbia albida, Neocarya macrophylla, on three different soil textures for three systems (fallow, parkland and rangeland), in order to understand potential exploitation of soil resources and potential contribution of roots to soil carbon stocks at different depths. The maximum root biomass of four of the species (Acacia raddiana, Balanites aegyptiaca, Euphorbia balsamifera, Neocarya macrophylla) occurred in the 40-60 cm layer, where the two evergreen species (A. raddiana, N. macrophylla) developed the most biomass. Root biomass decreased for all species except F. albida, after 60 cm depth. The Mimosaceae species (A. raddiana, F. albida) developed the most root biomass within the 100 cm sampling depth. The maximum fine root biomass was found in fallow lands and clay soils. For all species, the highest SRL was observed during the hot dry season, in sandy or sandy loam soil. The SRL was lowest in the rainy season on clay soil. Evergreens had higher SRL than deciduous species, regardless of soil texture and growing season conditions. Parkland and rangelands exhibited higher SRL than fallow land, most likely due to higher soil fertility. Differences between evergreen and deciduous SRL relied on adaptive strategies that seem to be conditioned by season, soil and land use. We also examined intraspecific variability of above and belowground traits to assess plasticity in response to environment. Evergreen species showed more variability in response to soil and to seasonal changes in temperature and moisture.

Satellite Images Combined with Field Data Reveal Negative Changes in the Distribution of Babassu Palms after Clearing off Amazonian Forests

NASA Astrophysics Data System (ADS)

Mitja, D.; Delaître, E.; Santos, A. M.; Miranda, I.; Coelho, R. F. R.; Macedo, D. J.; Demagistri, L.; Petit, M.

2018-02-01

When the Amazonian rain forest is cut to create pasture, some of the original vegetal species survive clearing, even expressing their ability to invade agro-systems. It is true of the babassu palm, which can be considered, paradoxically, a natural resource by the "Interstate Movement of Babassu Fruit Breaker Women" or as native weed by land owners-farmers. To manage potential conflict of land uses, we study here the current density of this palm tree in different habitats, based on a combination of field data and remote sensing data. Firstly, we checked that the field survey methodology (i.e., counting free-trunk palm trees over 20 cm in circumference) provides density values compatible with those stemming from satellite images interpretation. We can see then that, a PA-Benfica Brazilian territory revealed an average density of the babassu lower in pastures (2.86 ind/ha) than in the dense forest (4.72 ind/ha) from which they originate and than in fallow land (4.31 ind/ha). We analyze in detail density data repartition in three habitats and we discuss results from the literature on the density of this palm tree versus its resilience at different developmental stages after forest clearing, depending on anthropogenic—or not—factors, including solar radiation, fire, weeding, clear cutting, burying fruit, and competition with forage grass. All these results can be exploited for the design of future management plans for the babassu palm and we think that the linked methodology and interdisciplinary approach can be extended to others palms and trees species in similar problematic issues.

Satellite Images Combined with Field Data Reveal Negative Changes in the Distribution of Babassu Palms after Clearing off Amazonian Forests.

PubMed

Mitja, D; Delaître, E; Santos, A M; Miranda, I; Coelho, R F R; Macedo, D J; Demagistri, L; Petit, M

2018-02-01

When the Amazonian rain forest is cut to create pasture, some of the original vegetal species survive clearing, even expressing their ability to invade agro-systems. It is true of the babassu palm, which can be considered, paradoxically, a natural resource by the "Interstate Movement of Babassu Fruit Breaker Women" or as native weed by land owners-farmers. To manage potential conflict of land uses, we study here the current density of this palm tree in different habitats, based on a combination of field data and remote sensing data. Firstly, we checked that the field survey methodology (i.e., counting free-trunk palm trees over 20 cm in circumference) provides density values compatible with those stemming from satellite images interpretation. We can see then that, a PA-Benfica Brazilian territory revealed an average density of the babassu lower in pastures (2.86 ind/ha) than in the dense forest (4.72 ind/ha) from which they originate and than in fallow land (4.31 ind/ha). We analyze in detail density data repartition in three habitats and we discuss results from the literature on the density of this palm tree versus its resilience at different developmental stages after forest clearing, depending on anthropogenic-or not-factors, including solar radiation, fire, weeding, clear cutting, burying fruit, and competition with forage grass. All these results can be exploited for the design of future management plans for the babassu palm and we think that the linked methodology and interdisciplinary approach can be extended to others palms and trees species in similar problematic issues.

Soil organic carbon dynamics and crop yield for different crop rotations in a degraded ferruginous tropical soil in a semi-arid region: a simulation approach.

PubMed

Soler, C M Tojo; Bado, V B; Traore, K; Bostick, W McNair; Jones, J W; Hoogenboom, G

2011-10-01

In recent years, simulation models have been used as a complementary tool for research and for quantifying soil carbon sequestration under widely varying conditions. This has improved the understanding and prediction of soil organic carbon (SOC) dynamics and crop yield responses to soil and climate conditions and crop management scenarios. The goal of the present study was to estimate the changes in SOC for different cropping systems in West Africa using a simulation model. A crop rotation experiment conducted in Farakô-Ba, Burkina Faso was used to evaluate the performance of the cropping system model (CSM) of the Decision Support System for Agrotechnology Transfer (DSSAT) for simulating yield of different crops. Eight crop rotations that included cotton, sorghum, peanut, maize and fallow, and three different management scenarios, one without N (control), one with chemical fertilizer (N) and one with manure applications, were studied. The CSM was able to simulate the yield trends of various crops, with inconsistencies for a few years. The simulated SOC increased slightly across the years for the sorghum-fallow rotation with manure application. However, SOC decreased for all other rotations except for the continuous fallow (native grassland), in which the SOC remained stable. The model simulated SOC for the continuous fallow system with a high degree of accuracy normalized root mean square error (RMSE)=0·001, while for the other crop rotations the simulated SOC values were generally within the standard deviation (s.d.) range of the observed data. The crop rotations that included a supplemental N-fertilizer or manure application showed an increase in the average simulated aboveground biomass for all crops. The incorporation of this biomass into the soil after harvest reduced the loss of SOC. In the present study, the observed SOC data were used for characterization of production systems with different SOC dynamics. Following careful evaluation of the CSM with observed soil organic matter (SOM) data similar to the study presented here, there are many opportunities for the application of the CSM for carbon sequestration and resource management in Sub-Saharan Africa.

Long-term experiment with orchard floor management systems: influence on apple yield and chemical composition.

PubMed

Slatnar, Ana; Licznar-Malanczuk, Maria; Mikulic-Petkovsek, Maja; Stampar, Franci; Veberic, Robert

2014-05-07

The study focuses on the response of apple primary and secondary metabolism and some important quality parameters to three living mulch treatments, classical herbicide fallow, and black polypropylene strip application in two apple cultivars. Primary and secondary metabolites were analyzed after 10 years of ground cover experiments. Soluble solids, firmness, and color measurements indicate differences among orchard floor management treatments. Significantly, lower levels of individual sugars have been measured in fruit of different living mulch treatments compared with fruit harvested from trees subjected to the herbicide strip treatment. Total sugar content was higher in fruit of the herbicide strip treatment in both cultivars analyzed. Significantly higher levels of total organic acids were only detected in 'Pinova' fruit of the Festuca ovina L. treatment. Long-term response of both cultivars to living mulch treatments indicated that apples increase the accumulation of almost all analyzed individual phenolic compounds.

Bovine tuberculosis in a Nebraska herd of farmed elk and fallow deer: a failure of the tuberculin skin test and opportunities for serodiagnosis

USDA-ARS?s Scientific Manuscript database

In 2009, Mycobacterium bovis infection was detected in a herd of 59 elk (Cervus elaphus) and 50 fallow deer (Dama dama) in Nebraska, USA. Upon depopulation of the herd, the incidence of bovine tuberculosis (TB) was estimated at ~71 - 75%, based upon histopathology and culture results. Particularly w...

Global warming likely reduces crop yield and water availability of the dryland cropping systems in the U.S. central Great Plains

USDA-ARS?s Scientific Manuscript database

We investigated impacts of GCM-projected climate change on dryland crop rotations of wheat-fallow and wheat-corn-fallow in the Central Great Plains (Akron in Colorado, USA) using the CERES 4.0 crop modules in RZWQM2. The climate change scenarios for CO2, temperature, and precipitation were produced ...

Input and behavior of polycyclic aromatic hydrocarbons in arable, fallow, and forest soils of the taiga zone (Tver oblast)

NASA Astrophysics Data System (ADS)

Zhidkin, A. P.; Gennadiev, A. N.; Koshovskii, T. S.

2017-03-01

Contents of 11 most prevalent polycyclic aromatic hydrocarbons (PAHs) in snow and soils of arable, fallow, and forest areas significantly remote from impact technogenic sources of polyarenes have been examined in the Torzhok district of Tver oblast. From the analysis of snow samples, the volumes and composition of PAHs coming from the atmosphere onto the areas of different land use have been determined. Light hydrocarbons prevail in PAHs. They make up 65-70% of total PAHs; their share in soils reaches almost 95%. An increase in the content of PAHs is revealed in fallow soils compared to arable and afforested areas. A direct relationship is revealed between the lateral distribution of total PAHs and the content of organic carbon. The distribution of total PAHs is surface-accumulative in forest soils, mainly uniform in arable soils, and deepaccumulative in fallow soils. PAH groups characterized by similar radial distributions and ratios between their reserves in snow and soils are distinguished: (1) fluorene and phenanthrene, (2) biphenyl and naphthalene, (3) benzo(a)anthracene, chrysene, perylene, and benzo[ a]pyrene, and (4) anthracene and benzo[ ghi]pyrene.

EPSPS Gene Copy Number and Whole-Plant Glyphosate Resistance Level in Kochia scoparia.

PubMed

Gaines, Todd A; Barker, Abigail L; Patterson, Eric L; Westra, Philip; Westra, Eric P; Wilson, Robert G; Jha, Prashant; Kumar, Vipan; Kniss, Andrew R

2016-01-01

Glyphosate-resistant (GR) Kochia scoparia has evolved in dryland chemical fallow systems throughout North America and the mechanism of resistance involves 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene duplication. Agricultural fields in four states were surveyed for K. scoparia in 2013 and tested for glyphosate-resistance level and EPSPS gene copy number. Glyphosate resistance was confirmed in K. scoparia populations collected from sugarbeet fields in Colorado, Wyoming, and Nebraska, and Montana. Glyphosate resistance was also confirmed in K. scoparia accessions collected from wheat-fallow fields in Montana. All GR samples had increased EPSPS gene copy number, with median population values up to 11 from sugarbeet fields and up to 13 in Montana wheat-fallow fields. The results indicate that glyphosate susceptibility can be accurately diagnosed using EPSPS gene copy number.

Chernozems microbial community under anthropogenic impact (Russia)

NASA Astrophysics Data System (ADS)

Ivashchenko, Kristina; Ananyeva, Nadezhda; Sushko, Sofia; Vasenev, Viacheslav

2017-04-01

Chernozems is important natural resource, which in the last decade under intense influence as a result of plowing and urbanization. The parameters of soil microbial community functioning might be identify some soil deterioration under the impacts. Our research was focused on assessment of microbial community status in different soil layers of virgin steppe, bare fallow and urban ecosystems (Kursk region). In each ecosystem, we chose randomly 3-5 spatially distributed sites, where soil samples were collected by auguring up to 0.5 m depth (each layer 10 cm thickness) and up to 1.5 m depth (0-10, 10-50, 50-100, 100-150 cm layers), totally 127 samples. The bulk density was measured for these soil layers. In all soil samples the microbial biomass carbon content (Cmic) was analyzed by substrate-induced respiration (SIR) method and basal respiration (BR) was assessed by CO2 rate production. The fungi-to-bacteria ratio (selective inhibition technique with antibiotics) was determined and portion of Cmic in soil organic carbon (Corg) content was calculated in topsoil (0-10 cm). The Corg (dichromate oxidation) and pHw (potentiometry) values were measured. The Cmic and BR profile pools were calculated using bulk density and thickness of studied layers. The Cmic (0-10 cm) was varied from 84 to 1954 µg C g-1 soil, in steppe it was on average 3-4 times higher than those in bare fallow and urban. The BR rate was amounted from 0.20 to 1.57 µg CO2-C g-1 soil h-1, however no significant difference between studied ecosystems was found. It was shown the relationship between Cmic, BR and Corg (the linear regression, R2=0.92 and 0.75, respectively, p<0.05). The Cmic / Corg ratio in steppe was on average 3.3%, it was significantly higher those bare fallow and urban (1.6 and 0.7%, respectively). The fungi-to-bacteria ratio was decreased along ecosystems row: virgin steppe>bare fallow>urban, and it was on average 6.0, 5.2 and 1.8, respectively. The Cmic profile pool (0.5 m) of steppe was reached up on average 206 g C m-2, and it was 2.0 and 2.5 times higher those bare fallow and urban, respectively. The BR profile pool (0.5 m) in steppe and bare fallow was reached up 5.9 and 5.8 g CO2-C m-2 d-1, respectively, it was on average 2 times higher urban. The Cmic profile pool (1.5 m) in steppe was amounted to 372 g C m-2, and it was essentially higher those in bare fallow and urban (138 and 140 g C m-2, respectively). The BR profile pool (1.5 m) was also decreased along ecosystems row: steppe> fallow>urban, and it was on average 13.0, 8.0 and 5.6 g CO2-C m-2 d-1, respectively. Thus, we found a significant decreasing soil microbial biomass content, its portion in soil Corg, fungi content, and the Cmic and BR profile pools along Chernozems' ecosystems gradient from natural (virgin steppe) to anthropogenically transformed (bare fallow, urban). It might be illustrated some deterioration of soil microbial community functioning under plowing and urbanization. This research was supported by RFBR grants Nos. 15-04-00915 and 16-34-00398

Contribution of land use to rodent flea load distribution in the plague endemic area of Lushoto District, Tanzania.

PubMed

Hieronimo, Proches; Kihupi, Nganga I; Kimaro, Didas N; Gulinck, Hubert; Mulungu, Loth S; Msanya, Balthazar M; Leirs, Herwig; Deckers, Jozef A

2014-07-01

Fleas associated with different rodent species are considered as the major vectors of bubonic plague, which is still rampant in different parts of the world. The objective of this study was to investigate the contribution of land use to rodent flea load distribution at fine scale in the plague endemic area of north-eastern Tanzania. Data was collected in three case areas namely, Shume, Lukozi and Mwangoi, differing in plague incidence levels. Data collection was carried out during both wet and dry seasons of 2012. Analysis of Variance and Boosted Regression Tree (BRT) statistical methods were used to clarify the relationships between fleas and specific land use characteristics. There was a significant variation (P ≤ 0.05) of flea indices in different land use types. Fallow and natural forest had higher flea indices whereas plantation forest mono-crop and mixed annual crops had the lowest flea indices among the aggregated land use types. The influence of individual land use types on flea indices was variable with fallow having a positive effect and land tillage showing a negative effect. The results also demonstrated a seasonal effect, part of which can be attributed to different land use practices such as application of pesticides, or the presence of grass strips around fields. These findings suggest that land use factors have a major influence on rodent flea abundance which can be taken as a proxy for plague infection risk. The results further point to the need for a comprehensive package that includes land tillage and crop type considerations on one hand and the associated human activities on the other, in planning and implementation of plague control interventions.

Mapping Drought Impacts on Agricultural Production in California's Central Valley

NASA Astrophysics Data System (ADS)

Melton, F. S.; Guzman, A.; Johnson, L.; Rosevelt, C.; Verdin, J. P.; Dwyer, J. L.; Mueller, R.; Zakzeski, A.; Thenkabail, P. S.; Wallace, C.; Jones, J.; Windell, S.; Urness, J.; Teaby, A.; Hamblin, D.; Post, K. M.; Nemani, R. R.

2014-12-01

The ongoing drought in California has substantially reduced surface water supplies for millions of acres of irrigated farmland in California's Central Valley. Rapid assessment of drought impacts on agricultural production can aid water managers in assessing mitigation options, and guide decision making with respect to requests for local water transfers, county drought disaster designations, and allocation of emergency funds to mitigate drought impacts. Satellite remote sensing offers an efficient way to provide quantitative assessments of drought impacts on agricultural production and increases in idle acreage associated with reductions in water supply. A key advantage of satellite-based assessments is that they can provide a measure of land fallowing that is consistent across both space and time. We describe an approach for monthly and seasonal mapping of uncultivated agricultural acreage developed as part of a joint effort by USGS, USDA, NASA, and the California Department of Water Resources to provide timely assessments of land fallowing during drought events. This effort has used the Central Valley of California as a pilot region for development and testing of an operational approach. To provide quantitative measures of uncultivated agricultural acreage from satellite data early in the season, we developed a decision tree algorithm and applied it to timeseries of data from Landsat TM, ETM+, OLI, and MODIS. Our effort has been focused on development of indicators of drought impacts in the March - August timeframe based on measures of crop development patterns relative to a reference period with average or above average rainfall. To assess the accuracy of the algorithms, monthly ground validation surveys were conducted across 640 fields from March - September, 2014. We present the algorithm along with updated results from the accuracy assessment, and discuss potential applications to other regions.

Spatio-temporal footprints of urbanisation in Surat, the Diamond City of India (1990-2009).

PubMed

Sharma, Richa; Ghosh, Aniruddha; Joshi, Pawan Kumar

2013-04-01

Urbanisation is a ubiquitous phenomenon with greater prominence in developing nations. Urban expansion involves land conversions from vegetated moisture-rich to impervious moisture-deficient land surfaces. The urban land transformations alter biophysical parameters in a mode that promotes development of heat islands and degrades environmental health. This study elaborates relationships among various environmental variables using remote sensing dataset to study spatio-temporal footprint of urbanisation in Surat city. Landsat Thematic Mapper satellite data were used in conjugation with geo-spatial techniques to study urbanisation and correlation among various satellite-derived biophysical parameters, [Normalised Difference Vegetation Index, Normalised Difference Built-up Index, Normalised Difference Water Index, Normalised Difference Bareness Index, Modified NDWI and land surface temperature (LST)]. Land use land cover was prepared using hierarchical decision tree classification with an accuracy of 90.4 % (kappa = 0.88) for 1990 and 85 % (kappa = 0.81) for 2009. It was found that the city has expanded over 42.75 km(2) within a decade, and these changes resulted in elevated surface temperatures. For example, transformation from vegetation to built-up has resulted in 5.5 ± 2.6 °C increase in land surface temperature, vegetation to fallow 6.7 ± 3 °C, fallow to built-up is 3.5 ± 2.9 °C and built-up to dense built-up is 5.3 ± 2.8 °C. Directional profiling for LST was done to study spatial patterns of LST in and around Surat city. Emergence of two new LST peaks for 2009 was observed in N-S and NE-SW profiles.

Mapping croplands, cropping patterns, and crop types using MODIS time-series data

NASA Astrophysics Data System (ADS)

Chen, Yaoliang; Lu, Dengsheng; Moran, Emilio; Batistella, Mateus; Dutra, Luciano Vieira; Sanches, Ieda Del'Arco; da Silva, Ramon Felipe Bicudo; Huang, Jingfeng; Luiz, Alfredo José Barreto; de Oliveira, Maria Antonia Falcão

2018-07-01

The importance of mapping regional and global cropland distribution in timely ways has been recognized, but separation of crop types and multiple cropping patterns is challenging due to their spectral similarity. This study developed a new approach to identify crop types (including soy, cotton and maize) and cropping patterns (Soy-Maize, Soy-Cotton, Soy-Pasture, Soy-Fallow, Fallow-Cotton and Single crop) in the state of Mato Grosso, Brazil. The Moderate Resolution Imaging Spectroradiometer (MODIS) normalized difference vegetation index (NDVI) time series data for 2015 and 2016 and field survey data were used in this research. The major steps of this proposed approach include: (1) reconstructing NDVI time series data by removing the cloud-contaminated pixels using the temporal interpolation algorithm, (2) identifying the best periods and developing temporal indices and phenological parameters to distinguish croplands from other land cover types, and (3) developing crop temporal indices to extract cropping patterns using NDVI time-series data and group cropping patterns into crop types. Decision tree classifier was used to map cropping patterns based on these temporal indices. Croplands from Landsat imagery in 2016, cropping pattern samples from field survey in 2016, and the planted area of crop types in 2015 were used for accuracy assessment. Overall accuracies of approximately 90%, 73% and 86%, respectively were obtained for croplands, cropping patterns, and crop types. The adjusted coefficients of determination of total crop, soy, maize, and cotton areas with corresponding statistical areas were 0.94, 0.94, 0.88 and 0.88, respectively. This research indicates that the proposed approach is promising for mapping large-scale croplands, their cropping patterns and crop types.

Seasonal change of WEPP erodibility parameters for two fallow plots on a palouse silt loam

Treesearch

D. K. McCool; S. Dun; J. Q. Wu; W. J. Elliot; E. S. Brooks

2013-01-01

In cold regions, frozen soil has a significant influence on runoff and water erosion. In the U.S. Inland Pacific Northwest, major erosion events typically occur during winter as frozen soil thaws and exhibits low cohesion. Previous applications of the WEPP (Water Erosion Prediction Project) model to a continuous bare tilled fallow (CBF) runoff plot at the Palouse...

Cultivar preferences of ovipositing wheat stem sawflies as influenced by the amount of volatile attractant

Treesearch

David K. Weaver; Micaela Buteler; Megan L. Hofland; Justin B. Runyon; Christian Nansen; Luther E. Talbert; Peggy Lamb; Gregg R. Carlson

2009-01-01

The wheat stem sawfly, Cephus cinctus Norton, causes severe losses in wheat grown in the northern Great Plains. Much of the affected area is planted in monoculture with wheat, Triticum aestivum L., grown in large fields alternating yearly between crop and no-till fallow. The crop and fallow fields are adjacent. This cropping landscape creates pronounced edge effects of...

Experimental Transmission of Chronic Wasting Disease (CWD) from Elk (Cervus elaphus nelsoni) and White-tailed Deer (Odocoileus virginianus) to Fallow Deer (Dama dama) by Intracerebral Route: Final Report

USDA-ARS?s Scientific Manuscript database

In this communication we report final observations on experimental transmission of chronic wasting disease (CWD) from elk (Cervus elaphus nelsoni) and white tailed deer (Odocoileus virginianus) to fallow deer (Dama dama). The study was terminated 5 years after it was initiated. Thirteen fawns were i...

Drainage and tillage practices in the winter fallow season mitigate CH4 and N2O emissions from a double-rice field in China

NASA Astrophysics Data System (ADS)

Zhang, Guangbin; Yu, Haiyang; Fan, Xianfang; Yang, Yuting; Ma, Jing; Xu, Hua

2016-09-01

Traditional land management (no tillage, no drainage, NTND) during the winter fallow season results in substantial CH4 and N2O emissions from double-rice fields in China. A field experiment was conducted to investigate the effects of drainage and tillage during the winter fallow season on CH4 and N2O emissions and to develop mitigation options. The experiment had four treatments: NTND, NTD (drainage but no tillage), TND (tillage but no drainage), and TD (both drainage and tillage). The study was conducted from 2010 to 2014 in a Chinese double-rice field. During winter, total precipitation and mean daily temperature significantly affected CH4 emission. Compared to NTND, drainage and tillage decreased annual CH4 emissions in early- and late-rice seasons by 54 and 33 kg CH4 ha-1 yr-1, respectively. Drainage and tillage increased N2O emissions in the winter fallow season but reduced it in early- and late-rice seasons, resulting in no annual change in N2O emission. Global warming potentials of CH4 and N2O emissions were decreased by 1.49 and 0.92 t CO2 eq. ha-1 yr-1, respectively, and were reduced more by combining drainage with tillage, providing a mitigation potential of 1.96 t CO2 eq. ha-1 yr-1. A low total C content and high C / N ratio in rice residues showed that tillage in the winter fallow season reduced CH4 and N2O emissions in both early- and late-rice seasons. Drainage and tillage significantly decreased the abundance of methanogens in paddy soil, and this may explain the decrease of CH4 emissions. Greenhouse gas intensity was significantly decreased by drainage and tillage separately, and the reduction was greater by combining drainage with tillage, resulting in a reduction of 0.17 t CO2 eq. t-1. The results indicate that drainage combined with tillage during the winter fallow season is an effective strategy for mitigating greenhouse gas releases from double-rice fields.

Maize Endophytic Bacterial Diversity as Affected by Soil Cultivation History.

PubMed

Correa-Galeote, David; Bedmar, Eulogio J; Arone, Gregorio J

2018-01-01

The bacterial endophytic communities residing within roots of maize ( Zea mays L.) plants cultivated by a sustainable management in soils from the Quechua maize belt (Peruvian Andes) were examined using tags pyrosequencing spanning the V4 and V5 hypervariable regions of the 16S rRNA. Across four replicate libraries, two corresponding to sequences of endophytic bacteria from long time maize-cultivated soils and the other two obtained from fallow soils, 793 bacterial sequences were found that grouped into 188 bacterial operational taxonomic units (OTUs, 97% genetic similarity). The numbers of OTUs in the libraries from the maize-cultivated soils were significantly higher than those found in the libraries from fallow soils. A mean of 30 genera were found in the fallow soil libraries and 47 were in those from the maize-cultivated soils. Both alpha and beta diversity indexes showed clear differences between bacterial endophytic populations from plants with different soil cultivation history and that the soils cultivated for long time requires a higher diversity of endophytes. The number of sequences corresponding to main genera Sphingomonas, Herbaspirillum, Bradyrhizobium and Methylophilus in the maize-cultivated libraries were statistically more abundant than those from the fallow soils. Sequences of genera Dyella and Sreptococcus were significantly more abundant in the libraries from the fallow soils. Relative abundance of genera Burkholderia, candidatus Glomeribacter, Staphylococcus, Variovorax, Bacillus and Chitinophaga were similar among libraries. A canonical correspondence analysis of the relative abundance of the main genera showed that the four libraries distributed in two clearly separated groups. Our results suggest that cultivation history is an important driver of endophytic colonization of maize and that after a long time of cultivation of the soil the maize plants need to increase the richness of the bacterial endophytes communities.

Maize Endophytic Bacterial Diversity as Affected by Soil Cultivation History

PubMed Central

Correa-Galeote, David; Bedmar, Eulogio J.; Arone, Gregorio J.

2018-01-01

The bacterial endophytic communities residing within roots of maize (Zea mays L.) plants cultivated by a sustainable management in soils from the Quechua maize belt (Peruvian Andes) were examined using tags pyrosequencing spanning the V4 and V5 hypervariable regions of the 16S rRNA. Across four replicate libraries, two corresponding to sequences of endophytic bacteria from long time maize-cultivated soils and the other two obtained from fallow soils, 793 bacterial sequences were found that grouped into 188 bacterial operational taxonomic units (OTUs, 97% genetic similarity). The numbers of OTUs in the libraries from the maize-cultivated soils were significantly higher than those found in the libraries from fallow soils. A mean of 30 genera were found in the fallow soil libraries and 47 were in those from the maize-cultivated soils. Both alpha and beta diversity indexes showed clear differences between bacterial endophytic populations from plants with different soil cultivation history and that the soils cultivated for long time requires a higher diversity of endophytes. The number of sequences corresponding to main genera Sphingomonas, Herbaspirillum, Bradyrhizobium and Methylophilus in the maize-cultivated libraries were statistically more abundant than those from the fallow soils. Sequences of genera Dyella and Sreptococcus were significantly more abundant in the libraries from the fallow soils. Relative abundance of genera Burkholderia, candidatus Glomeribacter, Staphylococcus, Variovorax, Bacillus and Chitinophaga were similar among libraries. A canonical correspondence analysis of the relative abundance of the main genera showed that the four libraries distributed in two clearly separated groups. Our results suggest that cultivation history is an important driver of endophytic colonization of maize and that after a long time of cultivation of the soil the maize plants need to increase the richness of the bacterial endophytes communities. PMID:29662471

Cover-crops - improvement of soil fertility and provision of biomass

NASA Astrophysics Data System (ADS)

Kirchmeyr, Franz; Szerencsits, Manfred

2017-04-01

Besides climate change, erosion, inadequate crop rotation and intensive tillage may turn arable land into marginal land. On the other hand, reclamation approaches which include arable farming methods may result only in short-term success if they do not consider their effects on humus content and erosion. Additionally, effective reclamation will also have to address the growing need for food production besides biomass provision. Therefore, we investigated if cover or catch crops (CC) may accomplish both goals: Improve soil quality and humus content even if CC-biomass is used for biogas production. Humus content and soil fertility: In comparison to complete fallow in a crop rotation with silage maize and cereals the humus balance can be improved from -50 to +280 kg humus carbon (C) ha-1 year-1 through additional CC (4.5 t DM ha-1) used for biogas production and an equivalent amount of digestate returned to the field. With a CC-yield of 2.5 t DM ha-1 the humus balance results in 220 kg C ha-1 year-1. It is still slightly higher if the same CC remains on the field as green manure (170 kg C ha-1 year-1). Additionally it is important to consider that 20 - 50 % of the assimilated carbon can be found in the plant roots and that roots and root exudates as well as CC harvest residues provide fresh organic matter for soil life. Furthermore, biomass production of cover crops was considerably higher, if they were used for biogas production because of earlier cultivation and later harvest than mulching. Erosion control: The risk of erosion can be reduced by approx. 50 % in comparison to complete fallow if CC with 2.5 t DM ha-1 remain on the field as green manure. A comparable reduction can be achieved, if CC with 4.5 t DM ha-1 are harvested for biogas production. Because of better weed suppression, tilth and soil structure of CC with higher biomass, it is more likely to apply conservation tillage and avoid ploughing. Without ploughing a CC with 4.5 t DM ha-1 used for biogas the risk of erosion can even be reduced by approx. 75 % in comparison to complete fallow with ploughing. Water balance and quality: On the plots of our field experiments approx. 30 % of the precipitation contributed to groundwater recharge in crop rotations without CC. With 2.5 t CC DM ha-1 remaining on the field as green manure groundwater recharge was reduced to approx. 27 % whereas 4.5 t DM CC ha-1 caused a reduction to approx. 25 %. On the long term it can be expected that reduced erosion and increased humus content may improve the water storage capacity of soils and in this way reduce surface runoff and the risk of flooding. Additionally we found that CC remaining as green manure reduced the total nitrate leaching by 6 %. CC used for biogas reduced total leaching in comparison to complete fallow by 26 %.

EPSPS Gene Copy Number and Whole-Plant Glyphosate Resistance Level in Kochia scoparia

PubMed Central

Gaines, Todd A.; Barker, Abigail L.; Patterson, Eric L.; Westra, Philip; Westra, Eric P.; Wilson, Robert G.; Jha, Prashant; Kumar, Vipan

2016-01-01

Glyphosate-resistant (GR) Kochia scoparia has evolved in dryland chemical fallow systems throughout North America and the mechanism of resistance involves 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene duplication. Agricultural fields in four states were surveyed for K. scoparia in 2013 and tested for glyphosate-resistance level and EPSPS gene copy number. Glyphosate resistance was confirmed in K. scoparia populations collected from sugarbeet fields in Colorado, Wyoming, and Nebraska, and Montana. Glyphosate resistance was also confirmed in K. scoparia accessions collected from wheat-fallow fields in Montana. All GR samples had increased EPSPS gene copy number, with median population values up to 11 from sugarbeet fields and up to 13 in Montana wheat-fallow fields. The results indicate that glyphosate susceptibility can be accurately diagnosed using EPSPS gene copy number. PMID:27992501

Implications of changes in tropical shifting cultivation intensification on land productivity and GHG-related biogeochemistry

NASA Astrophysics Data System (ADS)

Bustier, Bernard; Ngoy, Alfred; Pietsch, Stephan; Mosnier, Aline

2017-04-01

Traditional shifting cultivation used to be a sustainable type of land use for the subsistence of populations in tropical rainforests. The vast resource of moist tropical forests together with low population densities allowed for long fallow periods on sparsely distributed slash and burn parcels with large areas of untouched forest in between. Population growth and concomitant increase in land demand for subsistence as well as increasing infrastructure development for commercial forestry, cash crops and mining, however, altered the picture over recent decades. As a result, fallow periods were reduced due to lack of pristine land. In this study we use field data and modeling results from the Congo Basin to assess the impacts of reduced fallow periods on Carbon sequestration dynamics using a BGC model calibrated and validated with > 150 research plots distributed over the western Congo Basin and representing different management and land use histories. We find that the average carbon sequestration rate reduces over the number of cultivation cycles and that a reduction of the fallow from 10 years to 7 years reduce the average carbon sequestration between 13 and 21% and from 7 years to 4 years between 23 and 29% depending on soil fertility. Results will be discussed in the context of population growth and changes in environmetal conditions.

Integration of Remote Sensing Products with Ground-Based Measurements to Understand the Dynamics of Nepal's Forests and Plantation Sites

NASA Astrophysics Data System (ADS)

Gilani, H.; Jain, A. K.

2016-12-01

This study assembles information from three sources - remote sensing, terrestrial photography and ground-based inventory data, to understand the dynamics of Nepal's tropical and sub-tropical forests and plantation sites for the period 1990-2015. Our study focuses on following three specific district areas, which have conserved forests through social and agroforestry management practices: 1. Dolakha district: This site has been selected to study the impact of community-based forest management on land cover change using repeat photography and satellite imagery, in combination with interviews with community members. The study time period is during the period 1990-2010. We determined that satellite data with ground photographs can provide transparency for long term monitoring. The initial results also suggests that community-based forest management program in the mid-hills of Nepal was successful. 2. Chitwan district: Here we use high resolution remote sensing data and optimized community field inventories to evaluate potential application and operational feasibility of community level REDD+ measuring, reporting and verification (MRV) systems. The study uses temporal dynamics of land cover transitions, tree canopy size classes and biomass over a Kayar khola watershed REDD+ study area with community forest to evaluate satellite Image segmentation for land cover, linear regression model for above ground biomass (AGB), and estimation and monitoring field data for tree crowns and AGB. We study three specific years 2002, 2009, 2012. Using integration of WorldView-2 and airborne LiDAR data for tree species level. 3. Nuwakot district: This district was selected to study the impact of establishment of tree plantation on total barren/fallow. Over the last 40 year, this area has went through a drastic changes, from barren land to forest area with tree species consisting of Dalbergia sissoo, Leucaena leucocephala, Michelia champaca, etc. In 1994, this district area was registered and established to grow and process high quality trees shaded of Arabica coffee beans. Here we use temporal satellite images and repeat terrestrial and aerial photographs, along with plot level biomass to show impact of this positive transformation of the landscape on above and below ground carbon masses. The study time period is 1990-2015.

Evolution of soil organic matter energetic and chemical composition during long-term bare fallow: implications for soil carbon vulnerability to global change

NASA Astrophysics Data System (ADS)

Barré, P.; Cécillon, L.; Plante, A. F.; Chenu, C.; Christensen, B. T.; Fernandez, J. M.; Gherardi, C. M.; Houot, S.; Kätterer, T.; van Oort, F.; Peltre, C.; Poulton, P. R.

2012-04-01

Determining the relative stability of soil organic carbon (SOC) is a critical step to better understanding its vulnerability to global change. The absence of convincing physical or chemical procedures to define, characterize or isolate relatively labile versus stable pools of SOC makes it difficult to study. Long-term bare fallow (LTBF) experiments, in which C inputs have been stopped for several decades, provide a unique opportunity to study stable SOC without the inherent artefacts induced by extraction procedures, the hypothesis being that SOC is gradually enriched in stable C with time as labile components decompose. We determined the evolution of energetic and chemical characteristics of bulk SOC in five LTBF experiments across Europe: Askov (DK), Grignon (FR), Rothamsted (UK), Ultuna (SW) and Versailles (FR), using simultaneous thermal analysis (i.e., thermogravimetry (TG), differential scanning calorimetry (DSC) and evolved CO2 gas analysis (CO2-EGA)) and diffuse reflectance Fourier transformed mid-infrared spectroscopy (DRIFT-MIRS). Results of TG analyses showed that the temperature needed to combust the first half of the SOC (i.e., TG-T50) increased with bare fallow duration at all sites. Conversely, the energy density (in mJ mg-1 C) decreased with bare fallow duration. Combined together, these results provide a means to contrast the stable, mineral-associated SOC pool from any potential pyrogenic C, which would have much greater energy density. DRIFT-MIRS results showed that the "carboxylation index" (the ratio of C=O bonds peak area over (C=C + C=O) bonds peak areas) decreased with bare fallow duration, that aromaticity (C=C bond peak area over C content) increased with bare-fallow duration, and that the "reticulation index" (CH3 peak area over CH2 peak area) decreased with increasing bare fallow duration at Rothamsted, Versailles and Ultuna. These trends were less clear or not observed at Grignon due to the presence of carbonates or at Askov due to greater variability, thus precluding unequivocal conclusions. Our results showed that in spite of the heterogeneity of the soils at the LTBF sites, generalized energetic and chemical pathways exist for SOC stabilization. The DRIFT-MIRS indices demonstrate that SOC stabilization is accompanied by a consistent evolution of its bulk chemical composition across most sites, over decades (ca. 50 years). The general decarboxylation of SOC observed in bare fallow challenges the current view of SOM decomposition, raising questions about the oxidative state of the stable C pool. The increased burning temperature and lower energy density of stable SOC suggest that decomposition of the stable C pool may be more temperature sensitive and thus vulnerable to increased temperature. Conversely, decreasing energy density suggests that priming might be the only means available for the microbial community to decompose this pool of SOC, and that SOC stability may be a function of low potential energy gain from decomposition of this material. Finally, this study illustrates the enormous value of such long-term field experiments, and a potential multi-faceted approach to quantify SOC stability as an ecosystem property.

Modeling methane and nitrous oxide emissions from direct-seeded rice systems

NASA Astrophysics Data System (ADS)

Simmonds, Maegen B.; Li, Changsheng; Lee, Juhwan; Six, Johan; van Kessel, Chris; Linquist, Bruce A.

2015-10-01

Process-based modeling of CH4 and N2O emissions from rice fields is a practical tool for conducting greenhouse gas inventories and estimating mitigation potentials of alternative practices at the scale of management and policy making. However, the accuracy of these models in simulating CH4 and N2O emissions in direct-seeded rice systems under various management practices remains a question. We empirically evaluated the denitrification-decomposition model for estimating CH4 and N2O fluxes in California rice systems. Five and nine site-year combinations were used for calibration and validation, respectively. The model was parameterized for two cultivars, M206 and Koshihikari, and able to simulate 30% and 78% of the variation in measured yields, respectively. Overall, modeled and observed seasonal CH4 emissions were similar (R2 = 0.85), but there was poor correspondence in fallow period CH4 emissions and in seasonal and fallow period N2O emissions. Furthermore, management effects on seasonal CH4 emissions were highly variable and not well represented by the model (0.2-465% absolute relative deviation). Specifically, simulated CH4 emissions were oversensitive to fertilizer N rate but lacked sensitivity to the type of seeding system (dry seeding versus water seeding) and prior fallow period straw management. Additionally, N2O emissions were oversensitive to fertilizer N rate and field drainage. Sensitivity analysis showed that CH4 emissions were highly sensitive to changes in the root to total plant biomass ratio, suggesting that it is a significant source of model uncertainty. These findings have implications for model-directed field research that could improve model representation of paddy soils for application at larger spatial scales.

Simulation of the Lower Walker River Basin hydrologic system, west-central Nevada, using PRMS and MODFLOW models

USGS Publications Warehouse

Allander, Kip K.; Niswonger, Richard G.; Jeton, Anne E.

2014-01-01

The effects of fallowing of Walker River Indian Irrigation Project fields from 2007 to 2010 on Walker Lake inflow, level, and dissolved solids were evaluated. Fallowing resulted in a near doubling of Walker River inflow to Walker Lake during this period, an increase in Walker Lake level of about 1.4 feet, and a decrease in dissolved-solids concentration of about 540 mg/L.

Linking measurements of biodegradability, thermal stability and chemical composition to evaluate the effects of management on soil organic matter

NASA Astrophysics Data System (ADS)

Gregorich, Ed; Gillespie, Adam; Beare, Mike; Curtin, Denis; Sanei, Hamed; Yanni, Sandra

2015-04-01

The stability of soil organic matter (SOM) as it relates to resistance to microbial degradation has important implications for nutrient cycling, emission of greenhouse gases, and C sequestration. Hence, there is interest in developing new ways to accurately quantify and characterise the labile and stable forms of soil organic C. Our objectives in this study were to evaluate and describe relationships among the biodegradability, thermal stability and chemistry of SOM in soil under widely contrasting management regimes. Samples from the same soil under permanent pasture, an arable cropping rotation, and chemical fallow were fractionated (sand: 2000-50 μm; silt: 50-5 μm, and clay: < 5 μm). Biodegradability of the SOM in size fractions and whole soils was assessed in a laboratory mineralization study. The chemical composition of SOM was characterized by X-ray absorption near-edge structure (XANES) spectroscopy at the K-edge and its thermal stability was determined by analytical pyrolysis using a Rock-Eval pyrolyser. The mineralization bioassay showed that whole soils and soil fractions under fallow were less susceptible to biodegradation than other managements and that sand-associated organic matter was significantly more susceptible than that in the silt or clay fractions. Analysis by XANES showed accumulation of carboxylates and strong depletion of amides (protein) and aromatics in the fallow whole soil. Moreover, protein depletion was most significant in the sand fraction of the fallow soil. Sand fractions in fallow and cropped soils were, however, enriched in plant-derived phenols, aromatics and carboxylates compared to the sand fraction of pasture soils. In contrast, ketones, which have been identified as products of microbially-processed organic matter, were slightly enriched in the silt fraction of the pasture soil. These data suggest reduced inputs and cropping restrict the decomposition of plant residues and, without supplemental N additions, protein-N in native SOM is significantly mineralized in fallow systems to meet microbial C mineralization demands. Analytical pyrolysis showed distinct differences in the thermal stability of SOM among the size fractions and management treatments; it also showed that the loss of SOM generally involved dehydrogenation. The temperature at which half of the C was pyrolyzed showed strong correlation with mineralizable C and thus provides solid evidence for a link between the biological and thermal stability of SOM.

The relative importance of decomposition and transport mechanisms in accounting for C profiles

NASA Astrophysics Data System (ADS)

Guenet, B.; Eglin, T.; Vasilyeva, N.; Peylin, P.; Ciais, P.; Chenu, C.

2012-10-01

Soil is the major terrestrial reservoirs of carbon, and a substantial part of this carbon is stored in deep layers, typically deeper than 50 cm below the surface. Several studies underlined the quantitative importance of this deep Soil Organic Carbon (SOC) pool and models are needed to better understand this stock and its evolution under climate and land-uses changes. In this study, we test and compare 3 simple theoretical models of vertical transport for SOC against SOC profiles measurements from a long-term bare fallow experiment carried out by the Central-Chernozem State Natural Biosphere Reserve named after V.V. Alekhin, in the Kursk Region of Russia. The transport schemes tested are diffusion, advection or both diffusion and advection. They are coupled to two different formulations of soil carbon decomposition kinetics. The first formulation is a first order kinetics widely used in global SOC decomposition models; the second one links SOC decomposition rate to the amount of fresh organic matter, representing a "priming effect". Field data are from a set of three bare fallow plots where soil received no input during the past 20, 26 and 58 yr respectively. Parameters of the models were optimized using a Bayesian method. The best results are obtained when SOC decomposition is assumed to be controlled by fresh organic matter. In comparison to the first-order kinetic model, the "priming" model reduces the underestimation of SOC decomposition in the top layers and the over estimation in the deep layers. We also observe that the transport scheme that improved the fit with the data depends on the soil carbon mineralization formulation chosen. When soil carbon decomposition is modelled to depend on the fresh organic matter amount, the transport mechanisms which improves best the fit to the SOC profile data is the model representing both advection and diffusion. Interestingly, the older the bare fallow is, the lesser the need for diffusion is. This suggests that stabilized carbon may not be transported within the profile by the same mechanisms than more labile carbon.

The relative importance of decomposition and transport mechanisms in accounting for soil organic carbon profiles

NASA Astrophysics Data System (ADS)

Guenet, B.; Eglin, T.; Vasilyeva, N.; Peylin, P.; Ciais, P.; Chenu, C.

2013-04-01

Soil is the major terrestrial reservoir of carbon and a substantial part of this carbon is stored in deep layers, typically deeper than 50 cm below the surface. Several studies underlined the quantitative importance of this deep soil organic carbon (SOC) pool and models are needed to better understand this stock and its evolution under climate and land-uses changes. In this study, we tested and compared three simple theoretical models of vertical transport for SOC against SOC profiles measurements from a long-term bare fallow experiment carried out by the Central-Chernozem State Natural Biosphere Reserve in the Kursk Region of Russia. The transport schemes tested are diffusion, advection and both diffusion and advection. They are coupled to three different formulations of soil carbon decomposition kinetics. The first formulation is a first order kinetics widely used in global SOC decomposition models; the second one, so-called "priming" model, links SOC decomposition rate to the amount of fresh organic matter, representing the substrate interactions. The last one is also a first order kinetics, but SOC is split into two pools. Field data are from a set of three bare fallow plots where soil received no input during the past 20, 26 and 58 yr, respectively. Parameters of the models were optimised using a Bayesian method. The best results are obtained when SOC decomposition is assumed to be controlled by fresh organic matter (i.e., the priming model). In comparison to the first-order kinetic model, the priming model reduces the overestimation in the deep layers. We also observed that the transport scheme that improved the fit with the data depended on the soil carbon mineralisation formulation chosen. When soil carbon decomposition was modelled to depend on the fresh organic matter amount, the transport mechanism which improved best the fit to the SOC profile data was the model representing both advection and diffusion. Interestingly, the older the bare fallow is, the lesser the need for diffusion is, suggesting that stabilised carbon may not be transported within the profile by the same mechanisms than more labile carbon.

Impact of vetch cover crop on runoff, soil loss, soil chemical properties and yield of chickpea in North Gondar, Ethiopia

NASA Astrophysics Data System (ADS)

Demelash, Nigus; Klik, Andreas; Holzmann, Hubert; Ziadat, Feras; Strohmeier, Stefan; Bayu, Wondimu; Zucca, Claudio; Abera, Atikilt

2016-04-01

Cover crops improve the sustainability and quality of both natural system and agro ecosystem. In Gumara-Maksegnit watershed which is located in Lake Tana basin, farmers usually use fallow during the rainy season for the preceding chickpea production system. The fallowing period can lead to soil erosion and nutrient losses. A field experiment was conducted during growing seasons 2014 and 2015 to evaluate the effect of cover crops on runoff, soil loss, soil chemical properties and yield of chickpea in North Gondar, Ethiopia. The plot experiment contained four treatments arranged in Randomized Complete Block Design with three replications: 1) Control plot (Farmers' practice: fallowing- without cover crop), 2) Chickpea planted with Di-ammonium phosphate (DAP) fertilizer with 46 k ha-1 P2O5 and 23 k ha-1 nitrogen after harvesting vetch cover crop, 3) Chick pea planted with vetch cover crop incorporated with the soil as green manure without fertilizer, 4) Chick pea planted with vetch cover crop and incorporated with the soil as green manure and with 23 k ha-1 P2O5 and 12.5 k ha-1 nitrogen. Each plot with an area of 36 m² was equipped with a runoff monitoring system. Vetch (Vicia sativa L.) was planted as cover crop at the onset of the rain in June and used as green manure. The results of the experiment showed statistically significant (P < 0.05) differences on the number of pods per plant, above ground biomass and grain yield of chick pea. However, there was no statistically significant difference (P > 0.05) on average plant height, average number of branches and hundred seed weight. Similarly, the results indicated that cover crop has a clear impact on runoff volume and sediment loss. Plots with vetch cover crop reduce the average runoff by 65% and the average soil loss decreased from 15.7 in the bare land plot to 8.6 t ha-1 with plots covered by vetch. In general, this result reveales that the cover crops, especially vetch, can be used to improve chickpea grain yield in addition to reduce soil erosion in the watershed.

Population Development of Pasteuria penetrans on Meloidogyne arenaria.

PubMed

Oostendorp, M; Dickson, D W; Mitchell, D J

1991-01-01

A microplot study on the influence of cropping sequences with peanut in summer and bare fallowed or cover crops of rye or vetch in winter on the population development of Pasteuria penetrans was initiated in the spring of 1987. The number of spores of P. penetrans attached per second-stage juvenile of Meloidogyne arenaria race 1 increased from 0.11 in the fall of 1987 to 7.6, 8.6, and 3.6 in the fall of 1989 in the rye, vetch, and fallowed plots, respectively. Higher (P

More CH4 is emitted during the fallow than during the growing season in a Mediterranean rice agrosystems

NASA Astrophysics Data System (ADS)

Martínez-Eixarch, Maite; Ibàñez, Carles; Alcaraz, Carles; Viñas, Marc; Aranda, Xavier; Saldaña, J. Antonio

2017-04-01

Paddy rice fields are an important source of greenhouse gas emissions (GHG) as they contribute 5 to 20 % of the global anthropogenic CH4 emissions. The Ebre Delta (Catalonia, NE Spain) is one of the most important wetland complexes in the Western Mediterranean with 65 % of its area covered by rice fields. The results herein presented assess the annual pattern of CH4 emissions from paddy rice in Ebre Delta, including the growing and fallow seasons as well as the major environmental variables modulating such emissions. Fifteen rice fields covering the geo-physical variability of the Ebre Delta were selected for GHG monitoring. Common agronomic management was practiced: water direct-seeding, permanent flooding and moderate mineral fertilization during the growing season and straw incorporation, progressive drainage of the fields after the harvest. Fields are left fallow during the winter. GHG were monthly sampled, from May to December in 2015. In each field, three closed chambers were used; from each of these, four gas samples were taken over a 30-minute period. Simultaneously, hydrological regime, soil physic-chemical parameters and plant cover were measured. GHG were analysed by gas chromatography. A Generalized linear model analysis (GLM) was performed to assess the most important influencing factors on CH4 emissions. An information-theoretic approach was used to find the best approximating models. Overall, the CH4 emissions showed a bi-modal pattern, with peaks in July-August and in October. Emissions rates ranged from 2.1 ± 0.5 to 7.5 ± 1.4 mg C-CH4 m-2 h-1 in the growing season (May to September) and from 25.0 ± 5.7 to 20.1 ± 3.3 mg C-CH4 m-2 h-1 at post-harvest (October to December). In total, 314 kg C-CH4 ha-1 were emitted from Ebre Delta rice fields, of which 70 % during post-harvest. Larger off-season emissions were likely induced by straw incorporation. The results of the GLM-IT analysis revealed that during the growing season, soil Eh and water level were the most important factors influencing CH4 emissions, followed by soil temperature and plant cover, with similar degree of importance. During the fallow season, soil redox and water level were also the most important factors, along with air temperature. Throughout the growing and fallow seasons, soil Eh was negatively related to CH4 emissions whereas temperature and plant cover positively. Interestingly, water level showed a contrasting effect on CH4 emissions: positive during the growing season and negative the fallow. Traditionally, most of the research on GHG mitigation options in paddy rice has been focused on the rice growing period and less attention has been paid to the post-harvest season. The higher contribution of the fallow season to the total annual CH4 emissions evidenced in our study suggests that more effort should be made on this season when aiming at mitigating CH4 emissions, being water and straw management the key factors. Accordingly, we also recommend the inclusion of the fallow season for GHG inventories from paddy rice, usually neglected, to avoid CH4 emissions underestimations.

Identification of pregnancy-associated glycoproteins and alpha-fetoprotein in fallow deer (Dama dama) placenta

PubMed Central

2014-01-01

Background This paper describes the isolation and characterization of pregnancy-associated glycoproteins (PAG) from fetal cotyledonary tissue (FCT) and maternal caruncular tissue (MCT) collected from fallow deer (Dama dama) pregnant females. Proteins issued from FCT and MCT were submitted to affinity chromatographies by using Vicia villosa agarose (VVA) or anti-bovine PAG-2 (R#438) coupled to Sepharose 4B gel. Finally, they were characterized by SDS-PAGE and N-terminal microsequencing. Results Four distinct fallow deer PAG (fdPAG) sequences were identified and submitted to Swiss-Prot database. Comparison of fdPAG with PAG sequences identified in other ruminant species exhibited 64 to 83% identity. Additionally, alpha-fetoprotein was identified in fetal and maternal tissues. Conclusion Our results demonstrate the efficacy of VVA and bovine PAG-2 affinity chromatographies for the isolation of PAG molecules expressed in deer placenta. This is the first report giving four specific amino acid sequences of PAG isolated from feto-maternal junction (FCT and MCT) in the Cervidae family. PMID:24410890

Wind erosion potential of a winter wheat-summer fallow rotation after land application of biosolids

NASA Astrophysics Data System (ADS)

Pi, Huawei; Sharratt, Brenton; Schillinger, William F.; Bary, Andrew I.; Cogger, Craig G.

2018-06-01

Conservation tillage is a viable management strategy to control soil wind erosion, but other strategies such as land application of biosolids that enhance soil quality may also reduce wind erosion. No studies have determined the effects of biosolids on wind erosion. Wind erosion potential of a silt loam was assessed using a portable wind tunnel after applying synthetic and biosolids fertilizer to traditional (disk) and conservation (undercutter) tillage practices during the summer fallow phase of a winter wheat-summer fallow (WW-SF) rotation in 2015 and 2016 in east-central Washington. Soil loss ranged from 12 to 61% lower for undercutter than disk tillage, possibly due to retention of more biomass on the soil surface of the undercutter versus disk tillage treatment. In contrast, soil loss was similar to or lower for biosolids as compared with synthetic fertilizer treatment. Our results suggest that biosolids applications to agricultural lands will have minimal impact on wind erosion.

LANDSCAPE CHANGES IN A LOWLAND IN BENIN: ECOLOGICAL IMPACT ON PESTS AND NATURAL ENEMIES.

PubMed

Boucher, A; Silvie, P; Menozzi, P; Adda, C; Auzoux, S; Jean, J; Huat, J

2015-01-01

Habitat management involving conservative biological control could be a good crop pest management option in poor African countries. A survey was conducted from August 2013 to July 2014 in a rainfed lowland region near Pélébina, northern Benin, in order to characterize spatiotemporal landscape changes and investigate their influence on the main crop pests and their associated natural enemies. The area was mapped mainly regarding crop fields and fallows. Visual observations were recorded and a database was compiled. Major landscape composition changes were noted between rainy and dry seasons, which affected the presence of both pests and natural enemies. Cereals (rice, maize and sorghum) and cotton were grown in the humid season, and then okra (Abelmoschus esculentus) was the dominant vegetable crop in dry season. These modifications impacted fallow abundance throughout the lowland. Different cotton (e.g. Helicoverpa armigera, Dysdercus sp., Zonocerus variegatus) or rice (e.g. Diopsis longicornis, D. apicalis) pests were observed during dry season in okra crops. Dry season surveys of Poaceae in two types of fallows ('humid', 'dry') revealed the presence of very few stem borers: only 0.04% of stems sampled were infested by stem borers, with a mean of 1.13 larvae per stem. Known cereal stem borer species such as Busseola fusco, Coniesta ignefusalis, Sesamia calamistis were not clearly identified among these larvae because of their diapausing stage and white color. Unexpected pollinators (Hymenoptera Apidae, genus Braunsapis, Ceratina and Xylocopa) and predators (Crabronidae, genus Dasyproctus) were found in the stems. Sweep-net collection of insects in humid fallows allowed us to describe for the first time in Benin seven Diopsidae species (23% of adults bearing Laboulbeniomycetes ectoparasitic fungi). Some of these species were captured in rice fields during rainy season. Parasitoids (adult Chalcidoidae and Ichneumonoidae) were observed during both seasons but their impact on stem borers was hard to determine, even during the rainy season, due to their low abundance and the difficulty of identification. Predators (Reduviidae, Odonata) were found mainly in humid fallows and rice fields. Regarding our observations, we suggest the presence of alternate host crops such as okra during the dry season for rainy season crop pests. Moreover, fallows also had a real ecological role as a habitat resource for many guilds of insects (pollinators, pests, predators). The management of these landscape components should be the focus of a long-term study with the aim of enhancing pest management of rainy season crop pests.

Forest gardening on abandoned terraces links local biomass carbon accumulation to international carbon markets, reverses land degradation, improves food diversity, and increases farmer income

NASA Astrophysics Data System (ADS)

Schmidt, Hans-Peter; Pandit, Bishnu Hari; Kammann, Claudia

2017-04-01

Despite chronic underproduction of food in Nepal, more and more agricultural land is abandoned especially in the remote middle hills and mountains. Male and young workers leave the villages for higher wages in the bigger cities or abroad. By now, most villages are mainly populated by women, children and elderly persons maintaining the gardens and fields close to the houses and leave the centenarian terraces fallow. Erosion, vanishing water resources, losses of soil organic carbon and the weakening of the local agro-economy become increasingly problematic. During the rainy season of 2015/16, 86 farmer families from four villages replanted their abandoned terraces with 25,000 mixed trees, mostly Cinnamon, Moringa, Mulberry, Lemon, Michelia, Paulownia, and various nuts. All trees were planted with a blend of organic biochar-based fertilizer and compost, since it was convincingly demonstrated by more than 20 field trials in this region that this was the most plant-growth promoting method. Mulching of the trees with rice straw or thatch grass was generalized. To let the young tries pass the critical seven months of dry season, water retention ponds with pipe irrigation were installed. Farmers were organized in groups of three families to mutually help and control the tree maintenance which led to an average tree survival rate of more than 80% after the first year compared to less than 50% in many country-wide forestation projects since the 1980s. Between the lower and upper lines of trees on the terraces, ginger, turmeric, black beans, onions, lentils and other secondary crops were cultivated using the same organic biochar based fertilizer and mulching techniques. What may seem a reasonable approach for many places, is in many of the poorest countries simply not possible to realize because village families do often not have the necessary initial investment for saplings and irrigation facilities at their disposal. Therefore, the Ithaka Institute linked the forest garden project to a carbon capture financing system. All planted trees are GIS inventoried and their yearly biomass carbon up-take is calculated on the base of the average ten-year carbon accumulation. The 25,000 mixed trees accumulate the equivalent of 350 t CO2 per year. At 35 US per t of CO2eq paid in advance by the international community in form of private carbon compensation subscriptions, all costs for the set-up of the forest gardens, their maintenance for three years plus a yearly prime could be paid. After this initial period of three years, the income from tree crops (fruits, nuts, medicine, essential oil, silk, perfume, honey, timber, animal fodder) exceeds by far the (catalyzer) carbon credits providing average crop incomes for the 25,000 trees including secondary mixed cropping of more than 150,000 USD per year. With new processed tree crop products, better-paid jobs are created, the local economy is fostered and the "lost generation" can start to return to their home villages. The objective of this pilot forest garden project was to establish a robust socio-agronomic system that can be multiplied from village to village, increasing soil fertility, protecting abandoned terraces from erosion, replenishing water resources, and generating stable incomes with climate-smart agriculture. The essential catalyst of the project was to link the global need to capture atmospheric carbon and to create negative emissions to slow down climate change with the local capacity to increase biomass growth and to sequester biomass carbon with new low-tech technology (biochar). The financial exchange between global CO2-emmitting communities with local CO2 capturing farmer communities could become a new motor to reverse land degradation, to reestablish ecosystem services, and to develop the rural socio-economy.

Soil pyrogenic carbon lacks long-term persistence

NASA Astrophysics Data System (ADS)

Lutfalla, Suzanne; Abiven, Samuel; Barré, Pierre; Wiedemeier, Daniel; Christensen, Bent; Houot, Sabine; Kätterer, Thomas; Macdonald, Andy; van Oort, Fok; Chenu, Claire

2015-04-01

In the context of climate change, one mitigation technique currently investigated is the use of pyrogenic organic carbon (PyOC) -which is biomass turned into charcoal- to sequester carbon in soils with the hypothesis that PyOC is persistent and will not be biodegraded (or mineralized). In this study, we use the unique opportunity offered by five long term bare fallow (LTBF) experiments across Europe (Askov in Denmark, Grignon and Versailles in France, Ultuna in Sweden and Rothamsted in the United Kingdom) to compare the dynamics of PyOC and soil organic carbon (SOC) in the same plots at the decadal time scale (from 25 to 80 years of bare fallow depending on the site). Bare fallow plots were regularly sampled throughout the bare fallow duration and these samples were carefully archived. In bare fallow plots, with negligible external carbon input and with continuing biodegradation, SOC is depleting. Using the Benzene Polycarboxylic Acid (BPCA) technique to estimate the PyOC quantity and quality in the soils at different sampling dates, we investigated if PyOC content was also decreasing and compared the rates of depletion of PyOC and SOC. We found that PyOC contents decreased rapidly in soils at all sites. The loss of PyOC between the first and the last soil sampling ranged from 19.8 to 57.3% of the initial PyOC content. Furthermore, PyOC quality exhibited a similar evolution at all sites, becoming more enriched in condensed material with time. We applied a one pool model with mono-exponential decay to our data and found an average mean residence time of native PyOC of 116 years across the different sites, with a standard deviation of 15 years, just 1.6 times longer than that of SOC. Our results show that, though having a longer residence time than total SOC, PyOC content can decrease rapidly in soils suggesting that the potential for long-term C storage in soil by PyOC amendments is less than currently anticipated. Our results therefore question the concept of biochar production as a climate change mitigation strategy.

Tick- and fly-borne bacteria in ungulates: the prevalence of Anaplasma phagocytophilum, haemoplasmas and rickettsiae in water buffalo and deer species in Central Europe, Hungary.

PubMed

Hornok, Sándor; Sugár, László; Fernández de Mera, Isabel G; de la Fuente, José; Horváth, Gábor; Kovács, Tibor; Micsutka, Attila; Gönczi, Enikő; Flaisz, Barbara; Takács, Nóra; Farkas, Róbert; Meli, Marina L; Hofmann-Lehmann, Regina

2018-03-20

Hunting constitutes an important industry in Europe. However, data on the prevalence of vector-borne bacteria in large game animal species are lacking from several countries. Blood or spleen samples (239 and 270, respectively) were taken from red, fallow and roe deer, as well as from water buffaloes, mouflons and wild boars in Hungary, followed by DNA extraction and molecular analyses for Anaplasma phagocytophilum, haemoplasmas and rickettsiae. Based on blood samples, the prevalence rate of A. phagocytophilum infection was significantly higher in red deer (97.9%) than in fallow deer (72.7%) and roe deer (60%), and in all these compared to mouflons (6.3%). In addition, 39.2% of the spleen samples from wild boars were PCR positive for A. phagocytophilum, but none of the buffalos. Based on blood samples, the prevalence rates of both Mycoplasma wenyonii (Mw) and 'Candidatus M. haemobos' (CMh) infections were significantly higher in buffaloes (Mw: 91.2%; CMh: 73.3%) than in red deer (Mw: 64.6%; CMh: 45.8%), and in both of them compared to fallow deer (Mw: 30.3%; CMh: 9.1%) and roe deer (Mw: 20%; CMh: 1.5%). The prevalence of Mw and CMh infection significantly correlated with the body sizes of these hosts. Furthermore, Mw was significantly more prevalent than CMh in buffaloes, red and roe deer. Mycoplasma ovis was detected in mouflons, M. suis in wild boars, R. helvetica in one fallow deer and one mouflon, and an unidentified Rickettsia sp. in a fallow deer. Forest-dwelling game animal species were found to be important carriers of A. phagocytophilum. In contrast, animals grazing grassland (i.e. buffaloes) were less likely to get infected with this Ixodes ricinus-borne pathogen. Water buffaloes, deer species, mouflons and wild boars harbored haemoplasmas that may affect domestic ungulates. Evaluated animals with larger body size had significantly higher prevalence of infection with haemoplasmas compared to smaller deer species. The above host species rarely carried rickettsiae.

Climate Change and Dryland Wheat Systems in the US Pacific Northwest

NASA Astrophysics Data System (ADS)

Stockle, C.; Karimi, T.; Huggins, D. R.; Nelson, R.

2015-12-01

A regional assessment of historical and future yields, and components of the water, nitrogen, and carbon soil balance of dryland wheat-based cropping systems in the US Pacific Northwest is being conducted (Regional Approaches to Climate Change project funded by USDA-NIFA). All these elements intertwines and are important to understand the future of these systems in the region. A computer simulation methodology was used based on the CropSyst model and historic and projected daily weather data downscaled to a 4x4 km grid including 14 general circulation models (GCMs) and two representative concentration pathways of future atmospheric CO2 (RCP 4.5 and RCP 8.5). The study region was divided in 3 agro-ecological zones (AEZ) based on precipitation amount: low (<300 mm/year), intermediate (300-460 mm/year) and high (>460 mm/year), with a change from crop-fallow, to transition fallow (crop-crop-fallow) to annual cropping, respectively. Typical wheat-based rotations included winter wheat (WW)-Summer fallow (SF) for the low AEZ, WW-spring wheat (SW)-SF for the intermediate AEZ, and WW-SW-spring peas for the high AEZ, all under conventional and no tillage management. Alternative systems incorporating canola were also evaluated. Results suggest that, in most cases, these dryland systems may fare well in the future (31-year periods centered around 2030, 2050, and 2070), with potential gains in productivity. Also, a trend towards increased fallow in the intermediate AEZ appears possible for higher productivity, and the inclusion of less water demanding crops may help sustain cropping intensity. Uncertainties in these projections arise from large discrepancies among climate models regarding the warming rate, compounded by different possible future CO2 emission scenarios, the degree of change in frequency and severity of extreme events and associated potential damages to crop canopies due to cold weather and grain set reduction due to extreme heat events. Furthermore, there is little understanding of the impact of climate change on pests, diseases and weeds that could affect crop production and management costs. Finally, there is also uncertainty on the speed of technological innovation allowing producers to adapt to changing conditions.

Microbiological parameters of aggregates in typical chernozems of long-term field experiments

NASA Astrophysics Data System (ADS)

Zhelezova, A. D.; Tkhakakhova, A. K.; Yaroslavtseva, N. V.; Garbuz, S. A.; Lazarev, V. I.; Kogut, B. M.; Kutovaya, O. V.; Kholodov, V. A.

2017-06-01

The changes in microbiological parameters of aggregates (1-2 mm) in typical chernozems under different land uses as dependent on the intensity and character of anthropogenic loads were studied with the help of the real-time polymerase chain reaction (PCR). The samples from the following long-term field experiments were examined: permanent black fallow, continuous cultivation of potato, 17-year-old unmanaged fallow after permanent black fallow, and annually mown reserved steppe. The soil samples were treated in two ways. In the first case, the samples were air-dried, sieved through the screens to separate aggregate fraction of 1-2 mm, and microbiological parameters were determined in this fraction. In the second case, the samples were frozen immediately after the sampling, and the aggregates of 1-2 mm were manually separated from the samples before the PCR analysis. It was shown that air-dry aggregates of chernozems could be used for the quantitative analysis of DNA of microbial community in comparative studies. According to the quantitative estimate of the content of DNA fragments from different phylogenetic groups, the bacterial community was most sensitive to the type of the soil use, and its restoration after the removal of extreme anthropogenic loads proceeded faster than that of other microorganisms. The content of archaeal DNA in the chernozem under the 17-year-old unmanaged fallow did not differ significantly from its content in the annually plowed chernozems. The changes in the content of micromycetal DNA related to anthropogenic load decrease were intermediate between changes in the contents of archaeal and bacterial DNA.

The emission of nitrous oxide upon wetting a rice soil following a dry season fallow

NASA Astrophysics Data System (ADS)

Byrnes, B. H.; Holt, L. S.; Austin, E. R.

1993-12-01

A greenhouse experiment was conducted to measure nitrous oxide (N2O) emissions from a soil, which had been planted to flooded transplanted rice, as it was rewetted to simulate the end of a dry season fallow period. The pots of soil had been cropped to transplanted rice with two commonly used nitrogen (N) fertilizer treatments and a control, and the soil had been puddled before transplanting. Large amounts of nitrate N accumulated in the soils during the dry season fallow, and the N fertilizers applied to the previous crop had little effect on nitrate accumulation. There was little N2O emission during the nitrification period. With water additions meant to simulate rainfall events at the beginning of a wet season, the soil redox dropped slightly, and large amounts of N2O began to be emitted. Large emissions began 5 days after each of the two simulated rainy season watering events and stopped abruptly at soil saturation, even though considerable amounts of nitrate still remained in the soil after saturation. Total measured emissions amounted to 6 to 7 kg N2O-N ha-1 for the period. Although these measurements were made in a system which may have favored nitrate accumulation, they are the first known measurements of N2O made from a rice soil as it is wetted. Nitrous oxide emitted from the flooding of rice soils that have accumulated nitrate during a dry season fallow may be a major source of N2O additions to the atmosphere.

14C-labeled organic amendments: Characterization in different particle size fractions and humic acids in a long-term field experiment

PubMed Central

Tatzber, Michael; Stemmer, Michael; Spiegel, Heide; Katzlberger, Christian; Landstetter, Claudia; Haberhauer, Georg; Gerzabek, Martin H.

2012-01-01

Knowledge about the stabilization of organic matter input to soil is essential for understanding the influence of different agricultural practices on turnover characteristics in agricultural soil systems. In this study, soil samples from a long-term field experiment were separated into silt- and clay-sized particles. In 1967, 14C labeled farmyard manure was applied to three different cropping systems: crop rotation, monoculture and permanent bare fallow. Humic acids (HAs) were extracted from silt- and clay-sized fractions and characterized using photometry, mid-infrared and fluorescence spectroscopy. Remaining 14C was determined in size fractions as well as in their extracted HAs. Yields of carbon and remaining 14C in HAs from silt-sized particles and Corg in clay-sized particles decreased significantly in the order: crop rotation > monoculture ≫ bare fallow. Thus, crop rotation not only had the largest overall C-pool in the experiment, but it also best stabilized the added manure. Mid-infrared spectroscopy could distinguish between HAs from different particle size soil fractions. With spectroscopic methods significant differences between the cropping systems were detectable in fewer cases compared to quantitative results of HAs (yields, 14C, Corg and Nt). The trends, however, pointed towards increased humification of HAs from bare fallow systems compared to crop rotation and monoculture as well as of HAs from clay-sized particles compared to silt-sized particles. Our study clearly shows that the largest differences were observed between bare fallow on one hand and monoculture and crop rotation on the other. PMID:23482702

Strong population structure in a species manipulated by humans since the Neolithic: the European fallow deer (Dama dama dama)

PubMed Central

Baker, K H; Gray, H W I; Ramovs, V; Mertzanidou, D; Akın Pekşen, Ç; Bilgin, C C; Sykes, N; Hoelzel, A R

2017-01-01

Species that have been translocated and otherwise manipulated by humans may show patterns of population structure that reflect those interactions. At the same time, natural processes shape populations, including behavioural characteristics like dispersal potential and breeding system. In Europe, a key factor is the geography and history of climate change through the Pleistocene. During glacial maxima throughout that period, species in Europe with temperate distributions were forced south, becoming distributed among the isolated peninsulas represented by Anatolia, Italy and Iberia. Understanding modern patterns of diversity depends on understanding these historical population dynamics. Traditionally, European fallow deer (Dama dama dama) are thought to have been restricted to refugia in Anatolia and possibly Sicily and the Balkans. However, the distribution of this species was also greatly influenced by human-mediated translocations. We focus on fallow deer to better understand the relative influence of these natural and anthropogenic processes. We compared modern fallow deer putative populations across a broad geographic range using microsatellite and mitochondrial DNA loci. The results revealed highly insular populations, depauperate of genetic variation and significantly differentiated from each other. This is consistent with the expectations of drift acting on populations founded by small numbers of individuals, and reflects known founder populations in the north. However, there was also evidence for differentiation among (but not within) physically isolated regions in the south, including Iberia. In those regions we find evidence for a stronger influence from natural processes than may be expected for a species with such strong, known anthropogenic influence. PMID:28353685

Effect of repeated drying-wetting-freezing-thawing cycles on the active soil organic carbon pool

NASA Astrophysics Data System (ADS)

Semenov, V. M.; Kogut, B. M.; Lukin, S. M.

2014-04-01

Samples of soddy-podzolic soil (long-term overgrown fallow and continuous bare fallow), gray forest soil (forest, farming agrocenosis), and a typical chernozem (virgin steppe, forest area, farming agrocenosis, continuous bare fallow) have been incubated under stable conditions; other samples of these soils have been subjected to six drying-wetting-incubation-freezing-thawing-incubation cycles during 136 days. The wetting of dried soils and the thawing of frozen soils result in an abrupt but short increase in the emission rate of C-CO2 by 2.7-12.4 and 1.6-2.7 times, respectively, compared to the stable incubation conditions. As the soil is depleted in potentially mineralizable organic matter, the rate of the C-CO2 emission pulses initiated by disturbing impacts decreases. The cumulative extra production of C-CO2 by soils of natural lands for six cycles makes up 21-40% of that in the treatments with stable incubation conditions; the corresponding value for cultivated soils, including continuous clean fallow, is in the range of 45-82%. The content of potentially mineralizable organic matter in the soils subjected to recurrent drying-wetting-freezingthawing cycles decreased compared to the soils without disturbing impacts by 1.6-4.4 times, and the mineralization constants decreased by 1.9-3.6 times. It has been emphasized that the cumulative effect of drying-wetting-freezing-thawing cycles is manifested not only in the decrease in the total Corg from the soil but also in the reduction of the mineralization potential of the soil organic matter.

14C-labeled organic amendments: Characterization in different particle size fractions and humic acids in a long-term field experiment.

PubMed

Tatzber, Michael; Stemmer, Michael; Spiegel, Heide; Katzlberger, Christian; Landstetter, Claudia; Haberhauer, Georg; Gerzabek, Martin H

2012-05-01

Knowledge about the stabilization of organic matter input to soil is essential for understanding the influence of different agricultural practices on turnover characteristics in agricultural soil systems. In this study, soil samples from a long-term field experiment were separated into silt- and clay-sized particles. In 1967, 14 C labeled farmyard manure was applied to three different cropping systems: crop rotation, monoculture and permanent bare fallow. Humic acids (HAs) were extracted from silt- and clay-sized fractions and characterized using photometry, mid-infrared and fluorescence spectroscopy. Remaining 14 C was determined in size fractions as well as in their extracted HAs. Yields of carbon and remaining 14 C in HAs from silt-sized particles and C org in clay-sized particles decreased significantly in the order: crop rotation > monoculture ≫ bare fallow. Thus, crop rotation not only had the largest overall C-pool in the experiment, but it also best stabilized the added manure. Mid-infrared spectroscopy could distinguish between HAs from different particle size soil fractions. With spectroscopic methods significant differences between the cropping systems were detectable in fewer cases compared to quantitative results of HAs (yields, 14 C, C org and N t ). The trends, however, pointed towards increased humification of HAs from bare fallow systems compared to crop rotation and monoculture as well as of HAs from clay-sized particles compared to silt-sized particles. Our study clearly shows that the largest differences were observed between bare fallow on one hand and monoculture and crop rotation on the other.

Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials

PubMed Central

Taylor, Anne E; Zeglin, Lydia H; Wanzek, Thomas A; Myrold, David D; Bottomley, Peter J

2012-01-01

It is well known that the ratio of ammonia-oxidizing archaea (AOA) and bacteria (AOB) ranges widely in soils, but no data exist on what might influence this ratio, its dynamism, or how changes in relative abundance influences the potential contributions of AOA and AOB to soil nitrification. By sampling intensively from cropped-to-fallowed and fallowed-to-cropped phases of a 2-year wheat/fallow cycle, and adjacent uncultivated long-term fallowed land over a 15-month period in 2010 and 2011, evidence was obtained for seasonal and cropping phase effects on the soil nitrification potential (NP), and on the relative contributions of AOA and AOB to the NP that recovers after acetylene inactivation in the presence and absence of bacterial protein synthesis inhibitors. AOB community composition changed significantly (P⩽0.0001) in response to cropping phase, and there were both seasonal and cropping phase effects on the amoA gene copy numbers of AOA and AOB. Our study showed that the AOA:AOB shifts were generated by a combination of different phenomena: an increase in AOA amoA abundance in unfertilized treatments, compared with their AOA counterparts in the N-fertilized treatment; a larger population of AOB under the N-fertilized treatment compared with the AOB community under unfertilized treatments; and better overall persistence of AOA than AOB in the unfertilized treatments. These data illustrate the complexity of the factors that likely influence the relative contributions of AOA and AOB to nitrification under the various combinations of soil conditions and NH4+-availability that exist in the field. PMID:22695861

Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials.

PubMed

Taylor, Anne E; Zeglin, Lydia H; Wanzek, Thomas A; Myrold, David D; Bottomley, Peter J

2012-11-01

It is well known that the ratio of ammonia-oxidizing archaea (AOA) and bacteria (AOB) ranges widely in soils, but no data exist on what might influence this ratio, its dynamism, or how changes in relative abundance influences the potential contributions of AOA and AOB to soil nitrification. By sampling intensively from cropped-to-fallowed and fallowed-to-cropped phases of a 2-year wheat/fallow cycle, and adjacent uncultivated long-term fallowed land over a 15-month period in 2010 and 2011, evidence was obtained for seasonal and cropping phase effects on the soil nitrification potential (NP), and on the relative contributions of AOA and AOB to the NP that recovers after acetylene inactivation in the presence and absence of bacterial protein synthesis inhibitors. AOB community composition changed significantly (P0.0001) in response to cropping phase, and there were both seasonal and cropping phase effects on the amoA gene copy numbers of AOA and AOB. Our study showed that the AOA:AOB shifts were generated by a combination of different phenomena: an increase in AOA amoA abundance in unfertilized treatments, compared with their AOA counterparts in the N-fertilized treatment; a larger population of AOB under the N-fertilized treatment compared with the AOB community under unfertilized treatments; and better overall persistence of AOA than AOB in the unfertilized treatments. These data illustrate the complexity of the factors that likely influence the relative contributions of AOA and AOB to nitrification under the various combinations of soil conditions and NH(4)(+)-availability that exist in the field.

Colour and oxidative stability of mince produced from fresh and frozen/thawed fallow deer (Dama dama) meat.

PubMed

Chakanya, Chido; Arnaud, Elodie; Muchenje, Voster; Hoffman, Louwrens C

2017-04-01

Colour and oxidative stability of minced meat from fresh and frozen/thawed fallow deer was investigated. For the seven fallow deer harvested, half of the meat was minced fresh and half was frozen (-20°C) for 2months under vacuum prior to grinding. Surface colour attributes, myoglobin content and surface redox forms, pH and lipid oxidation of the mince were measured during eight days of display storage. Proximate composition was determined in mince on day 0, fatty acid composition on day 0 and 8. Freezing had no effect on the proximate composition or fatty acid composition of the mince. Frozen meat mince had lower (P≤0.05) total myoglobin content but higher (P≤0.05) decrease in redness (a*) during display storage, higher (P≤0.05) accumulation of metmyoglobin at the surface from day 2 and higher (P≤0.05) TBARS values. Results showed shorter colour and oxidative stability for frozen meat mince as compared to mince from fresh meat. Display storage however did not affect fatty acid composition. Copyright © 2016 Elsevier Ltd. All rights reserved.

An assessment of the effectiveness of four in-house treatments to reduce the bacterial levels in poultry litter.

PubMed

Lopes, M; Leite, F L; Valente, B S; Heres, T; Dai Prá, M A; Xavier, E G; Roll, V F B

2015-09-01

Although the use of quicklime (CaO) and tarping are common handling practices aimed at the reuse of litter in the Brazilian poultry industry, few scientific studies have proven the effectiveness of these methods in reducing the pathogenic microbial load during fallowing. The objective of this study was to evaluate the following litter treatments: T1 no treatment (control), T2 quicklime (300 g m(-2)), T3 tarping, T4 tarping+quicklime (300 g m(-2)). The litter samples were collected on day zero and on the sixth and twelfth days after the start of fallowing. The use of quicklime alone or quicklime+tarping was more effective (P<0.05) in reducing bacteria when compared to litter tarping. Except for the control group, all treatments resulted in a more than 84% reduction in the count of colony-forming units (CFUs) at the end of fallowing. It is concluded that the use of quicklime alone in practical terms is the most indicated treatment for the reduction of the bacterial load of poultry litter. © 2015 Poultry Science Association Inc.

Evidence for host specificity of Theileria capreoli genotypes in cervids.

PubMed

Hornok, Sándor; Sugár, László; Horváth, Gábor; Kovács, Tibor; Micsutka, Attila; Gönczi, Enikő; Flaisz, Barbara; Takács, Nóra; Farkas, Róbert; Meli, Marina L; Hofmann-Lehmann, Regina

2017-10-10

Data on the prevalence of piroplasms in buffaloes and large game animal species are lacking from several central European countries. Therefore, to investigate the presence of Babesia/Theileria DNA in these hosts, 239 blood and 270 spleen samples were taken from cervids (red, fallow, and roe deer), as well as from water buffaloes, mouflons, and wild boars in southwestern Hungary, followed by DNA extraction and molecular analysis for piroplasms. All samples from buffaloes and wild boars were PCR negative. Based on spleen samples, the prevalence of piroplasms was significantly higher in red deer (41.7%) than in fallow deer (23.5%). Two genotypes of Theileria capreoli were identified, which showed significant association with their host species (i.e. genotype "capreoli-CE1" was exclusively found in roe deer, whereas red and fallow deer harbored only genotype "elaphi-CE1"). Genotype "elaphi-CE1" of T. capreoli was also detected in one mouflon. No Babesia spp. were identified. In conclusion, in the evaluated region, genotypes of T. capreoli show host-associations among cervids, and at least one of these genotypes may infect mouflons.

Genotypic diversity effects on the performance of Taraxacum officinale populations increase with time and environmental favorability.

PubMed

Drummond, Emily B M; Vellend, Mark

2012-01-01

Within-population genetic diversity influences many ecological processes, but few studies have examined how environmental conditions may impact these short-term diversity effects. Over four growing seasons, we followed experimental populations of a clonal, ubiquitous weed, Taraxacum officinale, with different numbers of genotypes in relatively favorable fallow field and unfavorable mowed lawn environmental treatments. Population performance (measured as total leaf area, seed production or biomass) clearly and consistently increased with diversity, and this effect became stronger over the course of the experiment. Diversity effects were stronger, and with different underlying mechanisms, in the fallow field versus the mowed lawn. Large genotypes dominated in the fallow field driving overyielding (via positive selection effects), whereas in the mowed lawn, where performance was limited by regular disturbance, there was evidence for complementarity among genotypes (with one compact genotype in particular performing better in mixture than monoculture). Hence, we predict stronger genotypic diversity effects in environments where intense intraspecific competition enhances genotypic differences. Our four-year field experiment plus seedling establishment trials indicate that genotypic diversity effects have far-reaching and context-dependent consequences across generations.

Management of deer for experimental studies with foor-and-mouth disease virus.

PubMed

Gibbs, E P; McDiarmid, A; Rowe, J J

1975-06-07

Red, sika, fallow, roe and muntjac deer adapted to captivity in experimental units designed for working with foot-and-mouth disease. The red, sika and fallow deer readily accepted rolled oats and hay as their staple diet. This diet was replaced for the roe and muntjac deer with flaked maize, calf starter pellets and green browse. Etorphine/acepromazine ans xylazine were found to be suitable sedatives for detailed examination of the tongue and oral cavity of the various species of deer and gave adequate analgesia for the inoculation and collection of virus samples.

Soil aggregation and aggregating agents as affected by long term contrasting management of an Anthrosol

NASA Astrophysics Data System (ADS)

Zhang, Shulan; Wang, Renjie; Yang, Xueyun; Sun, Benhua; Li, Qinghui

2016-12-01

Soil aggregation was studied in a 21-year experiment conducted on an Anthrosol. The soil management regimes consisted of cropland abandonment, bare fallow without vegetation and cropping system. The cropping system was combined with the following nutrient management treatments: control (CONTROL, no nutrient input); nitrogen, phosphorus and potassium (NPK); straw plus NPK (SNPK); and manure (M) plus NPK (MNPK). Compared with the CONTROL treatment, the abandonment treatment significantly increased the formation of large soil macroaggregates (>2 mm) and consequently improved the stability of aggregates in the surface soil layer due to enhancement of hyphal length and of soil organic matter content. However, in response to long-term bare fallow treatment aggregate stability was low, as were the levels of aggregating agents. Long term fertilization significantly redistributed macroaggregates; this could be mainly ascribed to soil organic matter contributing to the formation of 0.5-2 mm classes of aggregates and a decrease in the formation of the >2 mm class of aggregates, especially in the MNPK treatment. Overall, hyphae represented a major aggregating agent in both of the systems tested, while soil organic compounds played significantly different roles in stabilizing aggregates in Anthrosol when the cropping system and the soil management regimes were compared.

Soil aggregation and aggregating agents as affected by long term contrasting management of an Anthrosol

PubMed Central

Zhang, Shulan; Wang, Renjie; Yang, Xueyun; Sun, Benhua; Li, Qinghui

2016-01-01

Soil aggregation was studied in a 21-year experiment conducted on an Anthrosol. The soil management regimes consisted of cropland abandonment, bare fallow without vegetation and cropping system. The cropping system was combined with the following nutrient management treatments: control (CONTROL, no nutrient input); nitrogen, phosphorus and potassium (NPK); straw plus NPK (SNPK); and manure (M) plus NPK (MNPK). Compared with the CONTROL treatment, the abandonment treatment significantly increased the formation of large soil macroaggregates (>2 mm) and consequently improved the stability of aggregates in the surface soil layer due to enhancement of hyphal length and of soil organic matter content. However, in response to long-term bare fallow treatment aggregate stability was low, as were the levels of aggregating agents. Long term fertilization significantly redistributed macroaggregates; this could be mainly ascribed to soil organic matter contributing to the formation of 0.5–2 mm classes of aggregates and a decrease in the formation of the >2 mm class of aggregates, especially in the MNPK treatment. Overall, hyphae represented a major aggregating agent in both of the systems tested, while soil organic compounds played significantly different roles in stabilizing aggregates in Anthrosol when the cropping system and the soil management regimes were compared. PMID:27958366

Increase in soil stable carbon isotope ratio relates to loss of organic carbon: results from five long-term bare fallow experiments.

PubMed

Menichetti, Lorenzo; Houot, Sabine; van Oort, Folkert; Kätterer, Thomas; Christensen, Bent T; Chenu, Claire; Barré, Pierre; Vasilyeva, Nadezda A; Ekblad, Alf

2015-03-01

Changes in the (12)C/(13)C ratio (expressed as δ(13)C) of soil organic C (SOC) has been observed over long time scales and with depth in soil profiles. The changes are ascribed to the different reaction kinetics of (12)C and (13)C isotopes and the different isotopic composition of various SOC pool components. However, experimental verification of the subtle isotopic shifts associated with SOC turnover under field conditions is scarce. We determined δ(13)C and SOC in soil sampled during 1929-2009 in the Ap-horizon of five European long-term bare fallow experiments kept without C inputs for 27-80 years and covering a latitudinal range of 11°. The bare fallow soils lost 33-65% of their initial SOC content and showed a mean annual δ(13)C increase of 0.008-0.024‰. The (13)C enrichment could be related empirically to SOC losses by a Rayleigh distillation equation. A more complex mechanistic relationship was also examined. The overall estimate of the fractionation coefficient (ε) was -1.2 ± 0.3‰. This coefficient represents an important input to studies of long-term SOC dynamics in agricultural soils that are based on variations in (13)C natural abundance. The variance of ε may be ascribed to site characteristics not disclosed in our study, but the very similar kinetics measured across our five experimental sites suggest that overall site-specific factors (including climate) had a marginal influence and that it may be possible to isolate a general mechanism causing the enrichment, although pre-fallow land use may have some impact on isotope abundance and fractionation.

Cytotoxicity of ketamine, xylazine and Hellabrunn mixture in liver-, heart- and kidney-derived cells from fallow deer.

PubMed

Kovacova, Veronika; Abdelsalam, Ehdaa Eltayeb Eltigani; Bandouchova, Hana; Brichta, Jiri; Havelkova, Barbora; Piacek, Vladimir; Vitula, Frantisek; Pikula, Jiri

2016-12-18

Chemical restraint of wild animals is practiced to accomplish intended procedures such as capture, clinical examination, collection of diagnostic samples, treatment and/or transport. Extra-label use of animal medicinal drugs is often necessary in wildlife because most approved therapeutics do not list wild species on the labelling. Here, we used cellular in vitro models, a cutting-edge tool of biomedical research, to examine cytotoxicity of anaesthetic agents in fallow deer and extrapolate these data for anaesthetic risks in wildlife. We examined the cytotoxic effects of ketamine, xylazine, and ketamine-xylazine, i.e. the Hellabrunn mixture, on liver-, heart- and kidney-derived cell cultures prepared from a fallow deer (Dama dama) specimen. In line with preliminary studies we exposed cells to 10 µM, 50 µM, 100 µM, 1 mM, and 10 mM ketamine or xylazine. The combination of ketamine-xylazine was dosed at 0.025+0.02 mg/ml, 0.05+0.04 mg/ml, 0.75+0.06 mg/ml, 0.1+0.08 mg/ml, and 0.125+0.1 mg/ml per one well containing 10 000 cells. The quantification of cytotoxicity was based on lactate dehydrogenase activity released from damaged cells. Liver-derived cells show higher sensitivity to the cytotoxic effects of both ketamine and xylazine administered as single drugs when compared with cells cultured from the heart and kidney. The Hellabrunn mixture induced significantly higher cytotoxicity for kidney-derived cells ranging from 16.78% to 35.6%. Single and combined exposures to ketamine and xylazine resulted only in high-dose cytotoxicity in the heart-derived cells. Our results indicate that immobilization drugs significantly differ in their cytotoxic effects on cells derived from various organs of the fallow deer.

[Ants’ higher taxa as surrogates of species richness in a chronosequence of fallows, old-grown forests and agroforestry systems in the Eastern Amazon, Brazil].

PubMed

Muñoz Gutiérrez, Jhonatan Andrés; Roussea, Guillaume Xavier; Andrade-Silva, Joudellys; Delabie, Jacques Hubert Charles

2017-03-01

Deforestation in Amazon forests is one of the main causes for biodiversity loss worldwide. Ants are key into the ecosystem because act like engineers; hence, the loss of ants’ biodiversity may be a guide to measure the loss of essential functions into the ecosystems. The aim of this study was to evaluate soil ant’s richness and to estimate whether higher taxa levels (Subfamily and Genus) can be used as surrogates of species richness in different vegetation types (fallows, old-growth forests and agroforestry systems) in Eastern Amazon. The samples were taken in 65 areas in the Maranhão and Pará States in the period 2011-2014. The sampling scheme followed the procedure of Tropical Soil Biology and Fertility (TSBF). Initially, the vegetation types were characterized according to their age and estimated species richness. Linear and exponential functions were applied to evaluate if higher taxa can be used as surrogates and correlated with the Pearson coefficient. In total, 180 species distributed in 60 genera were identified. The results showed that ant species richness was higher in intermediate fallows (88) and old secondary forest (76), and was lower in agroforestry systems (38) and mature riparian forest (35). The genus level was the best surrogate to estimate the ant’s species richness across the different vegetation types, and explained 72-97 % (P < 0.001) of the total species variability. The results confirmed that the genus level is an excellent surrogate to estimate the ant’s species richness in the region and that both fallows and agroforestry systems may contribute in the conservation of Eastern Amazon ant community.

Persistence and Suppressiveness of Pasteuria penetrans to Meloidogyne arenaria Race.

PubMed

Cetintas, R; Dickson, D W

2004-12-01

The long-term persistence and suppressiveness of Pasteuria penetrans against Meloidogyne arenaria race 1 were investigated in a formerly root-knot nematode suppressive site following 9 years of continuous cultivation of three treatments and 4 years of continuous peanut. The three treatments were two M. arenaria race 1 nonhost crops, bahiagrass (Paspalum notatum cv. Pensacola var. Tifton 9), rhizomal peanut (Arachis glabrata cv. Florigraze), and weed fallow. Two root-knot nematode susceptible weeds commonly observed in weed fallow plots were hairy indigo (Indigofera hirsuta) and alyce clover (Alysicarpus vaginalis). The percentage of J2 with endospores attached reached the highest level of 87% in 2000 in weed fallow, and 63% and 53% in 2002 in bahiagrass and rhizomal peanut, respectively. The percentage of endospore-filled females extracted from peanut roots grown in weed fallow plots increased from nondetectable in 1999 to 56% in 2002, whereas the percentages in bahiagrass and rhizomal peanut plots were 41% and 16%, respectively. Over 4 years, however, there was no strong evidence that endospores densities reached suppressive levels because peanut roots, pods, and pegs were heavily galled, and yields were suppressed. This might be attributed to the discovery of M. javanica infecting peanut in this field in early autumn 2001. A laboratory test confirmed that although the P. penetrans isolate specific to M. arenaria attached to M. javanica J2, no development occurred. In summary, P. penetrans increased on M. arenaria over a 4-year period, but apparently because of infection of M. javanica on peanut at the field site root-knot disease was not suppressed. This was confirmed by a suppressive soil test that showed a higher level of soil suppressiveness than occurred in the field (P

Greenhouse gas emissions, soil quality, and crop productivity from a mono-rice cultivation system as influenced by fallow season straw management.

PubMed

Liu, Wei; Hussain, Saddam; Wu, Lishu; Qin, Ziguo; Li, Xiaokun; Lu, Jianwei; Khan, Fahad; Cao, Weidong; Geng, Mingjian

2016-01-01

Straw management during fallow season may influence crop productivity, soil quality, and greenhouse gas (GHG) emissions from rice field. A 3-year field experiment was carried out in central China to examine the influence of different fallow season straw management practices on rice yield, soil properties, and emissions of methane (CH4) and nitrous oxide (N2O) from a mono-rice cultivation system. The treatments comprised an unfertilized control (CK), inorganic fertilization (NPK), rice straw burning in situ (NPK + RSB), rice straw mulching (NPK + RSM), and rice straw strip mulching with green manuring (NPK + RSM + GM). The maximum rice yield, soil organic carbon, soil total nitrogen, and available potassium were observed in NPK + RSM + GM treatment. Compared with NPK, the NPK + RSM + GM recorded 9% higher grain yield averaged across 3 years. However, NPK + RSM and NPK + RSB were statistically similar with NPK regarding grain yield. The NPK + RSM and NPK + RSM + GM recorded significantly higher CH4 emission during rice growing season as well as winter fallow; however, the response of N2O emissions was variable. The NPK + RSM and NPK + RSM + GM were statistically similar for annual cumulative CH4 and N2O emissions. The NPK + RSM + GM recorded 103 and 72% higher straw-induced net economic benefits and soil organic carbon sequestration rate, and reduced net global warming potential by 27% as compared with NPK + RSM. Considering the benefits of soil fertility, higher crop productivity, and environmental safety, the NPK + RSM + GM could be the most feasible and sustainable option for mono-rice cultivation system in central China.

Salinity and High Temperature Tolerance in Mungbean [Vigna radiata (L.) Wilczek] from a Physiological Perspective

PubMed Central

HanumanthaRao, Bindumadhava; Nair, Ramakrishnan M.; Nayyar, Harsh

2016-01-01

Biotic and abiotic constraints seriously affect the productivity of agriculture worldwide. The broadly recognized benefits of legumes in cropping systems—biological nitrogen fixation, improving soil fertility and broadening cereal-based agro-ecologies, are desirable now more than ever. Legume production is affected by hostile environments, especially soil salinity and high temperatures (HTs). Among legumes, mungbean has acceptable intrinsic tolerance mechanisms, but many agro-physiological characteristics of the Vigna species remain to be explored. Mungbean has a distinct advantage of being short-duration and can grow in wide range of soils and environments (as mono or relay legume). This review focuses on salinity and HT stresses on mungbean grown as a fallow crop (mungbean-rice-wheat to replace fallow-rice-wheat) and/or a relay crop in cereal cropping systems. Salinity tolerance comprises multifaceted responses at the molecular, physiological and plant canopy levels. In HTs, adaptation of physiological and biochemical processes gradually may lead to improvement of heat tolerance in plants. At the field level, managing or manipulating cultural practices can mitigate adverse effects of salinity and HT. Greater understanding of physiological and biochemical mechanisms regulating these two stresses will contribute to an evolving profile of the genes, proteins, and metabolites responsible for mungbean survival. We focus on abiotic stresses in legumes in general and mungbean in particular, and highlight gaps that need to be bridged through future mungbean research. Recent findings largely from physiological and biochemical fronts are examined, along with a few agronomic and farm-based management strategies to mitigate stress under field conditions. PMID:27446183

Effects of over-winter green cover on soil solution nitrate concentrations beneath tillage land.

PubMed

Premrov, Alina; Coxon, Catherine E; Hackett, Richard; Kirwan, Laura; Richards, Karl G

2014-02-01

There is a growing need to reduce nitrogen losses from agricultural systems to increase food production while reducing negative environmental impacts. The efficacy of vegetation cover for reducing nitrate leaching in tillage systems during fallow periods has been widely investigated. Nitrate leaching reductions by natural regeneration (i.e. growth of weeds and crop volunteers) have been investigated to a lesser extent than reductions by planted cover crops. This study compares the efficacy of natural regeneration and a sown cover crop (mustard) relative to no vegetative cover under both a reduced tillage system and conventional plough-based system as potential mitigation measures for reducing over-winter soil solution nitrate concentrations. The study was conducted over three winter fallow seasons on well drained soil, highly susceptible to leaching, under temperate maritime climatic conditions. Mustard cover crop under both reduced tillage and conventional ploughing was observed to be an effective measure for significantly reducing nitrate concentrations. Natural regeneration under reduced tillage was found to significantly reduce the soil solution nitrate concentrations. This was not the case for the natural regeneration under conventional ploughing. The improved efficacy of natural regeneration under reduced tillage could be a consequence of potential stimulation of seedling germination by the autumn reduced tillage practices and improved over-winter plant growth. There was no significant effect of tillage practices on nitrate concentrations. This study shows that over winter covers of mustard and natural regeneration, under reduced tillage, are effective measures for reducing nitrate concentrations in free draining temperate soils. © 2013.

Polymorphisms and variants in the prion protein sequence of European moose (Alces alces), reindeer (Rangifer tarandus), roe deer (Capreolus capreolus) and fallow deer (Dama dama) in Scandinavia

PubMed Central

Wik, Lotta; Mikko, Sofia; Klingeborn, Mikael; Stéen, Margareta; Simonsson, Magnus; Linné, Tommy

2012-01-01

The prion protein (PrP) sequence of European moose, reindeer, roe deer and fallow deer in Scandinavia has high homology to the PrP sequence of North American cervids. Variants in the European moose PrP sequence were found at amino acid position 109 as K or Q. The 109Q variant is unique in the PrP sequence of vertebrates. During the 1980s a wasting syndrome in Swedish moose, Moose Wasting Syndrome (MWS), was described. SNP analysis demonstrated a difference in the observed genotype proportions of the heterozygous Q/K and homozygous Q/Q variants in the MWS animals compared with the healthy animals. In MWS moose the allele frequencies for 109K and 109Q were 0.73 and 0.27, respectively, and for healthy animals 0.69 and 0.31. Both alleles were seen as heterozygotes and homozygotes. In reindeer, PrP sequence variation was demonstrated at codon 176 as D or N and codon 225 as S or Y. The PrP sequences in roe deer and fallow deer were identical with published GenBank sequences. PMID:22441661

Mandibular osteomyelitis in red deer (Cervus elaphus hispanicus) and fallow deer (Dama dama): occurrence and associated factors in free-living populations in southern Spain.

PubMed

Azorit, Concepción; Oya, Antonia; Tellado, Sierra; Carrasco, Rafael; Moro, Javier

2012-01-01

The prevalence of mandibular osteomyelitis, which results in a condition called lumpy jaw, and factors associated with its occurrence were investigated in syntopic free-living populations of red deer (Cervus elaphus hispanicus) and fallow deer (Dama dama) in Spain. The study material consisted of 3,586 mandibles from 2,548 red deer and 1,038 fallow deer shot during sport hunting, herd management culls, and programs for population control between 1988 and 1997 (period 1) and 2002 and 2009 (period 2) in eastern Sierra Morena, southern Spain. Disease prevalence ranged from 0.36% to 10.91% among age groups. Older animals were significantly more likely to be affected than younger ones. Red deer stags had higher prevalence than other groups. There was a significantly higher prevalence in period 1, probably associated with differences in climatic and population conditions. High population densities of female red deer contributed significantly to occurrence of disease. Intensive herd management and poor environmental conditions were considered risk factors that increased susceptibility to disease. The study of this affliction could be useful for monitoring general herd welfare and ecologic changes in Mediterranean ecosystems.

Genotypic Diversity Effects on the Performance of Taraxacum officinale Populations Increase with Time and Environmental Favorability

PubMed Central

Drummond, Emily B. M.; Vellend, Mark

2012-01-01

Within-population genetic diversity influences many ecological processes, but few studies have examined how environmental conditions may impact these short-term diversity effects. Over four growing seasons, we followed experimental populations of a clonal, ubiquitous weed, Taraxacum officinale, with different numbers of genotypes in relatively favorable fallow field and unfavorable mowed lawn environmental treatments. Population performance (measured as total leaf area, seed production or biomass) clearly and consistently increased with diversity, and this effect became stronger over the course of the experiment. Diversity effects were stronger, and with different underlying mechanisms, in the fallow field versus the mowed lawn. Large genotypes dominated in the fallow field driving overyielding (via positive selection effects), whereas in the mowed lawn, where performance was limited by regular disturbance, there was evidence for complementarity among genotypes (with one compact genotype in particular performing better in mixture than monoculture). Hence, we predict stronger genotypic diversity effects in environments where intense intraspecific competition enhances genotypic differences. Our four-year field experiment plus seedling establishment trials indicate that genotypic diversity effects have far-reaching and context-dependent consequences across generations. PMID:22348004

Effect of a Terminated Cover Crop and Aldicarb on Cotton Yield and Meloidogyne incognita Population Density

PubMed Central

Wheeler, T. A.; Leser, J. F.; Keeling, J. W.; Mullinix, B.

2008-01-01

Terminated small grain cover crops are valuable in light textured soils to reduce wind and rain erosion and for protection of young cotton seedlings. A three-year study was conducted to determine the impact of terminated small grain winter cover crops, which are hosts for Meloidogyne incognita, on cotton yield, root galling and nematode midseason population density. The small plot test consisted of the cover treatment as the main plots (winter fallow, oats, rye and wheat) and rate of aldicarb applied in-furrow at-plant (0, 0.59 and 0.84 kg a.i./ha) as subplots in a split-plot design with eight replications, arranged in a randomized complete block design. Roots of 10 cotton plants per plot were examined at approximately 35 days after planting. Root galling was affected by aldicarb rate (9.1, 3.8 and 3.4 galls/root system for 0, 0.59 and 0.84 kg aldicarb/ha), but not by cover crop. Soil samples were collected in mid-July and assayed for nematodes. The winter fallow plots had a lower density of M. incognita second-stage juveniles (J2) (transformed to Log10 (J2 + 1)/500 cm3 soil) than any of the cover crops (0.88, 1.58, 1.67 and 1.75 Log10(J2 + 1)/500 cm3 soil for winter fallow, oats, rye and wheat, respectively). There were also fewer M. incognita eggs at midseason in the winter fallow (3,512, 7,953, 8,262 and 11,392 eggs/500 cm3 soil for winter fallow, oats, rye and wheat, respectively). Yield (kg lint per ha) was increased by application of aldicarb (1,544, 1,710 and 1,697 for 0, 0.59 and 0.84 kg aldicarb/ha), but not by any cover crop treatments. These results were consistent over three years. The soil temperature at 15 cm depth, from when soils reached 18°C to termination of the grass cover crop, averaged 9,588, 7,274 and 1,639 centigrade hours (with a minimum threshold of 10°C), in 2005, 2006 and 2007, respectively. Under these conditions, potential reproduction of M. incognita on the cover crop did not result in a yield penalty. PMID:19259531

Effect of a Terminated Cover Crop and Aldicarb on Cotton Yield and Meloidogyne incognita Population Density.

PubMed

Wheeler, T A; Leser, J F; Keeling, J W; Mullinix, B

2008-06-01

Terminated small grain cover crops are valuable in light textured soils to reduce wind and rain erosion and for protection of young cotton seedlings. A three-year study was conducted to determine the impact of terminated small grain winter cover crops, which are hosts for Meloidogyne incognita, on cotton yield, root galling and nematode midseason population density. The small plot test consisted of the cover treatment as the main plots (winter fallow, oats, rye and wheat) and rate of aldicarb applied in-furrow at-plant (0, 0.59 and 0.84 kg a.i./ha) as subplots in a split-plot design with eight replications, arranged in a randomized complete block design. Roots of 10 cotton plants per plot were examined at approximately 35 days after planting. Root galling was affected by aldicarb rate (9.1, 3.8 and 3.4 galls/root system for 0, 0.59 and 0.84 kg aldicarb/ha), but not by cover crop. Soil samples were collected in mid-July and assayed for nematodes. The winter fallow plots had a lower density of M. incognita second-stage juveniles (J2) (transformed to Log(10) (J2 + 1)/500 cm(3) soil) than any of the cover crops (0.88, 1.58, 1.67 and 1.75 Log(10)(J2 + 1)/500 cm(3) soil for winter fallow, oats, rye and wheat, respectively). There were also fewer M. incognita eggs at midseason in the winter fallow (3,512, 7,953, 8,262 and 11,392 eggs/500 cm(3) soil for winter fallow, oats, rye and wheat, respectively). Yield (kg lint per ha) was increased by application of aldicarb (1,544, 1,710 and 1,697 for 0, 0.59 and 0.84 kg aldicarb/ha), but not by any cover crop treatments. These results were consistent over three years. The soil temperature at 15 cm depth, from when soils reached 18 degrees C to termination of the grass cover crop, averaged 9,588, 7,274 and 1,639 centigrade hours (with a minimum threshold of 10 degrees C), in 2005, 2006 and 2007, respectively. Under these conditions, potential reproduction of M. incognita on the cover crop did not result in a yield penalty.

Effects of ENSO and Temporal Rainfall Variation on the Dynamics of Successional Communities in Old-Field Succession of a Tropical Dry Forest

PubMed Central

Maza-Villalobos, Susana; Poorter, Lourens; Martínez-Ramos, Miguel

2013-01-01

The effects of temporal variation of rainfall on secondary succession of tropical dry ecosystems are poorly understood. We studied effects of inter-seasonal and inter-year rainfall variation on the dynamics of regenerative successional communities of a tropical dry forest in Mexico. We emphasized the effects caused by the severe El Niño Southern Oscillation (ENSO) occurred in 2005. We established permanent plots in sites representing a chronosequence of Pasture (abandoned pastures, 0–1 years fallow age), Early (3–5), Intermediate (8–12), and Old-Growth Forest categories (n = 3 per category). In total, 8210 shrubs and trees 10 to 100-cm height were identified, measured, and monitored over four years. Rates of plant recruitment, growth and mortality, and gain and loss of species were quantified per season (dry vs. rainy), year, and successional category, considering whole communities and separating seedlings from sprouts and shrubs from trees. Community rates changed with rainfall variation without almost any effect of successional stage. Mortality and species loss rates peaked during the ENSO year and the following year; however, after two rainy years mortality peaked in the rainy season. Such changes could result from the severe drought in the ENSO year, and of the outbreak of biotic agents during the following rainy years. Growth, recruitment and species gain rates were higher in the rainy season but they were significantly reduced after the ENSO year. Seedlings exhibited higher recruitment and mortality rate than sprouts, and shrubs showed higher recruitment than trees. ENSO strongly impacted both the dynamics and trajectory of succession, creating transient fluctuations in the abundance and species richness of the communities. Overall, there was a net decline in plant and species density in most successional stages along the years. Therefore, strong drought events have critical consequences for regeneration dynamics, delaying the successional process and modifying the resilience of these systems. PMID:24349179

Prioritizing Crop Management to Increase Nitrogen Use Efficiency in Australian Sugarcane Crops.

PubMed

Thorburn, Peter J; Biggs, Jody S; Palmer, Jeda; Meier, Elizabeth A; Verburg, Kirsten; Skocaj, Danielle M

2017-01-01

Sugarcane production relies on the application of large amounts of nitrogen (N) fertilizer. However, application of N in excess of crop needs can lead to loss of N to the environment, which can negatively impact ecosystems. This is of particular concern in Australia where the majority of sugarcane is grown within catchments that drain directly into the World Heritage listed Great Barrier Reef Marine Park. Multiple factors that impact crop yield and N inputs of sugarcane production systems can affect N use efficiency (NUE), yet the efficacy many of these factors have not been examined in detail. We undertook an extensive simulation analysis of NUE in Australian sugarcane production systems to investigate (1) the impacts of climate on factors determining NUE, (2) the range and drivers of NUE, and (3) regional variation in sugarcane N requirements. We found that the interactions between climate, soils, and management produced a wide range of simulated NUE, ranging from ∼0.3 Mg cane (kg N) -1 , where yields were low (i.e., <50 Mg ha -1 ) and N inputs were high, to >5 Mg cane (kg N) -1 in plant crops where yields were high and N inputs low. Of the management practices simulated (N fertilizer rate, timing, and splitting; fallow management; tillage intensity; and in-field traffic management), the only practice that significantly influenced NUE in ratoon crops was N fertilizer application rate. N rate also influenced NUE in plant crops together with the management of the preceding fallow. In addition, there is regional variation in N fertilizer requirement that could make N fertilizer recommendations more specific. While our results show that complex interrelationships exist between climate, crop growth, N fertilizer rates and N losses to the environment, they highlight the priority that should be placed on optimizing N application rate and fallow management to improve NUE in Australian sugarcane production systems. New initiatives in seasonal climate forecasting, decisions support systems and enhanced efficiency fertilizers have potential for making N fertilizer management more site specific, an action that should facilitate increased NUE.

Prioritizing Crop Management to Increase Nitrogen Use Efficiency in Australian Sugarcane Crops

PubMed Central

Thorburn, Peter J.; Biggs, Jody S.; Palmer, Jeda; Meier, Elizabeth A.; Verburg, Kirsten; Skocaj, Danielle M.

2017-01-01

Sugarcane production relies on the application of large amounts of nitrogen (N) fertilizer. However, application of N in excess of crop needs can lead to loss of N to the environment, which can negatively impact ecosystems. This is of particular concern in Australia where the majority of sugarcane is grown within catchments that drain directly into the World Heritage listed Great Barrier Reef Marine Park. Multiple factors that impact crop yield and N inputs of sugarcane production systems can affect N use efficiency (NUE), yet the efficacy many of these factors have not been examined in detail. We undertook an extensive simulation analysis of NUE in Australian sugarcane production systems to investigate (1) the impacts of climate on factors determining NUE, (2) the range and drivers of NUE, and (3) regional variation in sugarcane N requirements. We found that the interactions between climate, soils, and management produced a wide range of simulated NUE, ranging from ∼0.3 Mg cane (kg N)-1, where yields were low (i.e., <50 Mg ha-1) and N inputs were high, to >5 Mg cane (kg N)-1 in plant crops where yields were high and N inputs low. Of the management practices simulated (N fertilizer rate, timing, and splitting; fallow management; tillage intensity; and in-field traffic management), the only practice that significantly influenced NUE in ratoon crops was N fertilizer application rate. N rate also influenced NUE in plant crops together with the management of the preceding fallow. In addition, there is regional variation in N fertilizer requirement that could make N fertilizer recommendations more specific. While our results show that complex interrelationships exist between climate, crop growth, N fertilizer rates and N losses to the environment, they highlight the priority that should be placed on optimizing N application rate and fallow management to improve NUE in Australian sugarcane production systems. New initiatives in seasonal climate forecasting, decisions support systems and enhanced efficiency fertilizers have potential for making N fertilizer management more site specific, an action that should facilitate increased NUE. PMID:28928756

Selection of flooded agricultural fields and other landscapes by female northern pintails wintering in Tulare Basin, California

USGS Publications Warehouse

Fleskes, Joseph P.; Jarvis, Robert L.; Gilmer, David S.

2003-01-01

Habitat selection and use are measures of relative importance of habitats to wildlife and necessary information for effective wildlife conservation. To measure the relative importance of flooded agricultural fields and other landscapes to northern pintails (Anas acuta) wintering in Tulare Basin (TB), California, we radiotagged female pintails during late August-early October, 1991-1993 in TB and other San Joaquin Valley areas and determined use and selection of these TB landscapes through March each year. Availability of landscape and field types in TB changed within and among years. Pintail use and selection (based upon use-to-availability log ratios) of landscape and field types differed among seasons, years, and diel periods. Fields flooded after harvest and before planting (i.e., pre-irrigated) were the most available, used, and selected landscape type before the hunting season (Prehunt). Safflower was the most available, used, and-except in 1993, when pre-irrigated fallow was available-selected pre-irrigated field type during Prehunt. Pre-irrigated barley-wheat received 19-22% of use before hunting season, but selection varied greatly among years and diel periods. During and after hunting season, managed marsh was the most available, used, and, along with floodwater areas, selected landscape type; pre-irrigated cotton and alfalfa were the least selected field types and accounted for <13% of pintail use. Agricultural drainwater evaporation ponds, sewage treatment ponds, and reservoirs accounted for 42-48% of flooded landscape available but were little used and least selected. Exodus of pintails from TB coincided with drying of pre-irrigated fallow, safflower, and barley-wheat fields early in winter, indicating that preferred habitats were lacking in TB during late winter. Agriculture conservation programs could improve TB for pintails by increasing flooding of fallow and harvested safflower and grain fields. Conservation of remaining wetlands should concentrate on increasing the amount and productivity of marsh that is shallow-flooded as pre-irrigated grain fields dry. If pin- tails were provided with adequate preferred field and marsh habitats, including hunt-day sanctuaries, contaminant risks associated with exposure to drainwater evaporation ponds probably should remain low for these waterfowl even if their abundance in TB increased.

Dry Matter Production, Nutrient Cycled and Removed, and Soil Fertility Changes in Yam-Based Cropping Systems with Herbaceous Legumes in the Guinea-Sudan Zone of Benin.

PubMed

Maliki, Raphiou; Sinsin, Brice; Floquet, Anne; Cornet, Denis; Malezieux, Eric; Vernier, Philippe

2016-01-01

Traditional yam-based cropping systems (shifting cultivation, slash-and-burn, and short fallow) often result in deforestation and soil nutrient depletion. The objective of this study was to determine the impact of yam-based systems with herbaceous legumes on dry matter (DM) production (tubers, shoots), nutrients removed and recycled, and the soil fertility changes. We compared smallholders' traditional systems (1-year fallow of Andropogon gayanus-yam rotation, maize-yam rotation) with yam-based systems integrated herbaceous legumes (Aeschynomene histrix/maize intercropping-yam rotation, Mucuna pruriens/maize intercropping-yam rotation). The experiment was conducted during the 2002 and 2004 cropping seasons with 32 farmers, eight in each site. For each of them, a randomized complete block design with four treatments and four replicates was carried out using a partial nested model with five factors: Year, Replicate, Farmer, Site, and Treatment. Analysis of variance (ANOVA) using the general linear model (GLM) procedure was applied to the dry matter (DM) production (tubers, shoots), nutrient contribution to the systems, and soil properties at depths 0-10 and 10-20 cm. DM removed and recycled, total N, P, and K recycled or removed, and soil chemical properties (SOM, N, P, K, and pH water) were significantly improved on yam-based systems with legumes in comparison with traditional systems.

Dry Matter Production, Nutrient Cycled and Removed, and Soil Fertility Changes in Yam-Based Cropping Systems with Herbaceous Legumes in the Guinea-Sudan Zone of Benin

PubMed Central

Sinsin, Brice; Floquet, Anne; Cornet, Denis; Malezieux, Eric; Vernier, Philippe

2016-01-01

Traditional yam-based cropping systems (shifting cultivation, slash-and-burn, and short fallow) often result in deforestation and soil nutrient depletion. The objective of this study was to determine the impact of yam-based systems with herbaceous legumes on dry matter (DM) production (tubers, shoots), nutrients removed and recycled, and the soil fertility changes. We compared smallholders' traditional systems (1-year fallow of Andropogon gayanus-yam rotation, maize-yam rotation) with yam-based systems integrated herbaceous legumes (Aeschynomene histrix/maize intercropping-yam rotation, Mucuna pruriens/maize intercropping-yam rotation). The experiment was conducted during the 2002 and 2004 cropping seasons with 32 farmers, eight in each site. For each of them, a randomized complete block design with four treatments and four replicates was carried out using a partial nested model with five factors: Year, Replicate, Farmer, Site, and Treatment. Analysis of variance (ANOVA) using the general linear model (GLM) procedure was applied to the dry matter (DM) production (tubers, shoots), nutrient contribution to the systems, and soil properties at depths 0–10 and 10–20 cm. DM removed and recycled, total N, P, and K recycled or removed, and soil chemical properties (SOM, N, P, K, and pH water) were significantly improved on yam-based systems with legumes in comparison with traditional systems. PMID:27446635

Influence of agricultural management on chemical quality of a clay soil of semi-arid Morocco

NASA Astrophysics Data System (ADS)

Ibno Namr, Khalid; Mrabet, Rachid

2004-06-01

Morocco's semi-arid lands are characterized by unique challenges. The most important obstacles to the development of durable agriculture are (1) limited and unpredictable supply of soil moisture and (2) low soil quality. Intensive use of soil throughout history has led to depletion in soil quality, leading in return to reduced yields because of the consequent reduced organic matter. Recognizing the need to recover soil quality and production decline, INRA scientists began, in the early 1980s, research on the effects of crop rotations, tillage and residue management on the productivity and quality of cropped soils. The present study concerns the short-term effect of rotation, tillage and residue management on selected quality indices of a calcixeroll (organic matter, nitrogen, particulate organic carbon (Cpom), particulate organic nitrogen (Npom) and pH). Hence, three rotations (wheat-wheat, WW; fallow-wheat, FW; and fallow-wheat-barley, FWB), two tillage systems (conventional offset disking, CT and no-tillage, NT), and three levels of residue in the NT system (NT 0 = no-residue cover, NT 50 = half surface residue cover, NT 100 = full surface residue cover) were selected. Three surface horizons were sampled (0-2.5, 2.5-7 and 7-20 cm). The study results showed an improvement of measured soil chemical properties under NT compared to CT, at the surface layer. No-tillage system helped sequestration of carbon and nitrogen, build-up of particulate organic carbon and nitrogen and sensible reduction of pH only at the surface layer. Continuous wheat permitted a slight improvement of soil quality, mainly at the 0-2.5 cm depth. Effects of rotation, tillage and residue level were reduced with depth of measurements.

Significant alteration of soil bacterial communities and organic carbon decomposition by different long-term fertilization management conditions of extremely low-productivity arable soil in South China.

PubMed

Xun, Weibing; Zhao, Jun; Xue, Chao; Zhang, Guishan; Ran, Wei; Wang, Boren; Shen, Qirong; Zhang, Ruifu

2016-06-01

Different fertilization managements of red soil, a kind of Ferralic Cambisol, strongly affected the soil properties and associated microbial communities. The association of the soil microbial community and functionality with long-term fertilization management in the unique low-productivity red soil ecosystem is important for both soil microbial ecology and agricultural production. Here, 454 pyrosequencing analysis of 16S recombinant ribonucleic acid genes and GeoChip4-NimbleGen-based functional gene analysis were used to study the soil bacterial community composition and functional genes involved in soil organic carbon degradation. Long-term nitrogen-containing chemical fertilization-induced soil acidification and fertility decline and significantly altered the soil bacterial community, whereas long-term organic fertilization and fallow management improved the soil quality and maintained the bacterial diversity. Short-term quicklime remediation of the acidified soils did not change the bacterial communities. Organic fertilization and fallow management supported eutrophic ecosystems, in which copiotrophic taxa increased in relative abundance and have a higher intensity of labile-C-degrading genes. However, long-term nitrogen-containing chemical fertilization treatments supported oligotrophic ecosystems, in which oligotrophic taxa increased in relative abundance and have a higher intensity of recalcitrant-C-degrading genes but a lower intensity of labile-C-degrading genes. Quicklime application increased the relative abundance of copiotrophic taxa and crop production, although these effects were utterly inadequate. This study provides insights into the interaction of soil bacterial communities, soil functionality and long-term fertilization management in the red soil ecosystem; these insights are important for improving the fertility of unique low-productivity red soil. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

Evaluating realized genetic gains from tree improvement.

Treesearch

J.B. St. Clair

1993-01-01

Tree improvement has become an essential part of the management of forest lands for wood production, and predicting yields and realized gains from forests planted with genetically-improved trees will become increasingly important. This paper discusses concepts of tree improvement and genetic gain important to growth and yield modeling, and reviews previous studies of...

Strategic plans for the Hardwood Tree Improvement and Regeneration Center

Treesearch

Charles H. Michler; Keith E. Woeste

2002-01-01

The mission of the Hardwood Tree Improvement and Regeneration Center (HTIRC) at Purdue University is to advance the science of hardwood tree improvement and genomics in the central hardwood region of the United States by: developing and disseminating knowledge on improving the genetic quality of hardwood tree species; conserving fine hardwood germplasm; developing...

Ascorbic Acid Alleviates Water Stress in Young Peach Trees and Improves Their Performance after Rewatering.

PubMed

Penella, Consuelo; Calatayud, Ángeles; Melgar, Juan C

2017-01-01

Exogenous application of biochemicals has been found to improve water stress tolerance in herbaceous crops but there are limited studies on deciduous fruit trees. The goal of this research was to study if ascorbic acid applications could improve physiological mechanisms associated with water stress tolerance in young fruit trees. Ascorbic acid was foliarly applied at a concentration of 250 ppm to water-stressed and well-watered peach trees (control) of two cultivars ('Scarletprince' and 'CaroTiger'). Trees received either one or two applications, and 1 week after the second application all trees were rewatered to field capacity. Upon rewatering, CO 2 assimilation and stomatal conductance of water-stressed 'Scarletprince' trees sprayed with ascorbic acid (one or two applications) were similar to those of well-irrigated trees, but water-stressed trees that had not received ascorbic acid did not recover photosynthetical functions. Also, water status in sprayed water-stressed 'Scarletprince' trees was improved to values similar to control trees. On the other hand, water-stressed 'CaroTiger' trees needed two applications of ascorbic acid to reach values of CO 2 assimilation similar to control trees but these applications did not improve their water status. In general terms, different response mechanisms to cope with water stress in presence of ascorbic acid were found in each cultivar, with 'Scarletprince' trees preferentially using proline as compatible solute and 'CaroTiger' trees relying on stomatal regulation. The application of ascorbic acid reduced cell membrane damage and increased catalase activity in water-stressed trees of both cultivars. These results suggest that foliar applications of ascorbic acid could be used as a management practice for improving water stress tolerance of young trees under suboptimal water regimes.

Ascorbic Acid Alleviates Water Stress in Young Peach Trees and Improves Their Performance after Rewatering

PubMed Central

Penella, Consuelo; Calatayud, Ángeles; Melgar, Juan C.

2017-01-01

Exogenous application of biochemicals has been found to improve water stress tolerance in herbaceous crops but there are limited studies on deciduous fruit trees. The goal of this research was to study if ascorbic acid applications could improve physiological mechanisms associated with water stress tolerance in young fruit trees. Ascorbic acid was foliarly applied at a concentration of 250 ppm to water-stressed and well-watered peach trees (control) of two cultivars (‘Scarletprince’ and ‘CaroTiger’). Trees received either one or two applications, and 1 week after the second application all trees were rewatered to field capacity. Upon rewatering, CO2 assimilation and stomatal conductance of water-stressed ‘Scarletprince’ trees sprayed with ascorbic acid (one or two applications) were similar to those of well-irrigated trees, but water-stressed trees that had not received ascorbic acid did not recover photosynthetical functions. Also, water status in sprayed water-stressed ‘Scarletprince’ trees was improved to values similar to control trees. On the other hand, water-stressed ‘CaroTiger’ trees needed two applications of ascorbic acid to reach values of CO2 assimilation similar to control trees but these applications did not improve their water status. In general terms, different response mechanisms to cope with water stress in presence of ascorbic acid were found in each cultivar, with ‘Scarletprince’ trees preferentially using proline as compatible solute and ‘CaroTiger’ trees relying on stomatal regulation. The application of ascorbic acid reduced cell membrane damage and increased catalase activity in water-stressed trees of both cultivars. These results suggest that foliar applications of ascorbic acid could be used as a management practice for improving water stress tolerance of young trees under suboptimal water regimes. PMID:28979284

A comparison of the abilities of the USLE-M, RUSLE2 and WEPP to model event erosion from bare fallow areas.

PubMed

Kinnell, P I A

2017-10-15

Traditionally, the Universal Soil Loss Equation (USLE) and the revised version of it (RUSLE) have been applied to predicting the long term average soil loss produced by rainfall erosion in many parts of the world. Overtime, it has been recognized that there is a need to predict soil losses over shorter time scales and this has led to the development of WEPP and RUSLE2 which can be used to predict soil losses generated by individual rainfall events. Data currently exists that enables the RUSLE2, WEPP and the USLE-M to estimate historic soil losses from bare fallow runoff and soil loss plots recorded in the USLE database. Comparisons of the abilities of the USLE-M and RUSLE2 to estimate event soil losses from bare fallow were undertaken under circumstances where both models produced the same total soil loss as observed for sets of erosion events on 4 different plots at 4 different locations. Likewise, comparisons of the abilities of the USLE-M and WEPP to model event soil loss from bare fallow were undertaken for sets of erosion events on 4 plots at 4 different locations. Despite being calibrated specifically for each plot, WEPP produced the worst estimates of event soil loss for all the 4 plots. Generally, the USLE-M using measured runoff to calculate the product of the runoff ratio, storm kinetic energy and the maximum 30-minute rainfall intensity produced the best estimates. As to be expected, ability of the USLE-M to estimate event soil loss was reduced when runoff predicted by either RUSLE2 or WEPP was used. Despite this, the USLE-M using runoff predicted by WEPP estimated event soil loss better than WEPP. RUSLE2 also outperformed WEPP. Copyright © 2017 Elsevier B.V. All rights reserved.

Farmers' perception on the importance of variegated grasshopper (Zonocerus variegatus (L.)) in the agricultural production systems of the humid forest zone of Southern Cameroon

PubMed Central

Kekeunou, Sévilor; Weise, Stephan; Messi, Jean; Tamò, Manuel

2006-01-01

Background Zonocerus variegatus (Linnaeus, 1758) (Orthoptera: Pyrgomorphidae) is known as an agricultural pest in West and Central Africa. However, its importance in the agricultural production system in Cameroon has not been investigated. The study assesses farmers' perception on the importance of Z. variegatus in the agricultural production systems of the humid forest zone of Southern Cameroon. Methods Research was carried out in 5 villages of each of three Agro-Ecological, Cultural and Demographic Blocks (AECD-Blocks) of the Forest Margin Benchmark Area (FMBA). In each village, a semi-structured survey was used; male and female groups of farmers were interviewed separately. Results Z. variegatus is present throughout the humid forest zone of Southern Cameroon, where it is ranked as the third most economically important insect pest of agriculture. In the farmers' opinion, Z. variegatus is a polyphagous insect with little impact on young perennial crops. The length of the pre-farming fallow does not affect Z. variegatus pest pressure in the following crops. The increased impact of the grasshopper observed today in the fields, compared to what existed 10 years ago is as a result of deforestation and increase in surface of herbaceous fallow. The damage caused by Z. variegatus is higher in fields adjacent to C. odorata and herbaceous fallows than in those adjacent to forests and shrubby fallows. The fight against this grasshopper is often done through physical methods carried out by hand, for human consumption. The farmers highlight low usage of the chemical methods and a total absence of biological and ecological methods. Conclusion Farmers' perception have contributed to understanding the status of Z. variegatus in the humid forest zone of Southern Cameroon. The results are in general similar to those obtained in other countries. PMID:16573815

The effect of changes in agricultural practices on the density of Dermacentor reticulatus ticks.

PubMed

Mierzejewska, Ewa J; Alsarraf, Mohammed; Behnke, Jerzy M; Bajer, Anna

2015-07-30

The impact of agricultural practices/ activities on the environment has been falling in many areas of Europe due to the widespread exodus of inhabitants from rural areas. The associated abandonment of agricultural lands has enabled a wide range of wild animals to prosper in the countryside, including birds, ungulates and large carnivores. One consequence has been the increase in ticks and associated tick-borne diseases which now constitute a greater threat for public health than earlier. The aim of the present study was to compare tick densities in different habitats (pasture, meadow, fallow land, post-fire areas) to assess the impact of different agricultural practices on tick densities in vicinities close to human habitation. Between September 2011 and June 2014, 2985 Dermacentor reticulatus ticks were collected by conventional dragging, in the Mazowieckie (Mazovia) and Warmińsko-Mazurskie (Masuria) regions of Poland. In each region, 3 study sites were selected, each situated near surface water sources (i.e., ponds or canals). At each site, three neighboring habitats of surface area 150-600 m(2) were dragged: one on a cattle/horse pasture; the second on meadow; the third on fallow land (abandoned field or meadow), at least twice during each spring and autumn. Additionally, four post-fire areas (one in 2013 and three in 2014) were identified in the Mazowieckie region, and dragging was conducted there in spring and autumn, including in each case a 'control area' comprising intact unburned fallow land situated in close vicinity to the burned areas. Eight hundred D. reticulatus ticks were collected and the densities were compared by multifactorial ANOVA. The highest tick densities were recorded on the fallow lands, and the lowest - on the grazed pastures. Tick densities were up to 10 × times higher on the control sites compared to neighboring post-fire sites. Copyright © 2015 Elsevier B.V. All rights reserved.

Bird communities of natural and modified habitats in Panama

USGS Publications Warehouse

Petit, L.J.; Petit, D.R.; Christian, D.G.; Powell, Hugo D.W.

1999-01-01

Only a small proportion of land can realistically be protected as nature reserves and thus conservation efforts also must focus on the ecological value of agroecosystems and developed areas surrounding nature reserves. In this study, avian communities were surveyed in 11 habitat types in central Panama, across a gradient from extensive forest to intensive agricultural land uses, to examine patterns of species richness and abundance and community composition. Wooded habitats, including extensive and fragmented forests, shade coffee plantations, and residential areas supported the most species and individuals. Nearctic-Neotropical migratory species were most numerous in lowland forest fragments, shade coffee, and residential areas. Introduced Pinus caribbea and sugar cane plantations supported the fewest species compared to all other habitats. Cattle pastures left fallow for less than two years supported more than twice as many total species as actively grazed pastures, such that species richness in fallow pastures was similar to that found in wooded habitats. Community similarities were relatively low among all habitat types (none exceeding the observed 65% similarity between extensive and fragmented lowland forests), but communities in shade coffee and residential areas were 43% and 54% similar to lowland forest fragments, respectively. Fallow pastures and residential areas shared 60% of their species. Bird communities in shade coffee and residential areas were characterized by higher proportions of frugivorous and nectarivorous species than in native forests. These same guilds also were better represented in fallow than in grazed pastures. Raptors and piscivorous species were most prevalent in cattle pastures and rice fields. These results, though based upon only species richness and abundance, demonstrate that many human-altered habitats have potential ecological value for birds, and conservation efforts in tropical areas should focus greater attention on enhancement of agricultural and developed lands as wildlife habitat. To understand the true conservation value of these modified lands will require examination not only of numbers but also of the types of species supported by these habitats, their reproductive output and survival rates.

Convergent adaptations: bitter manioc cultivation systems in fertile anthropogenic dark earths and floodplain soils in Central Amazonia.

PubMed

Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

2012-01-01

Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for research and debate concerning the origins, evolution, history and contemporary cultivation of bitter manioc in Amazonia and beyond.

Convergent Adaptations: Bitter Manioc Cultivation Systems in Fertile Anthropogenic Dark Earths and Floodplain Soils in Central Amazonia

PubMed Central

Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

2012-01-01

Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for research and debate concerning the origins, evolution, history and contemporary cultivation of bitter manioc in Amazonia and beyond. PMID:22952727

Proceedings of the 23rd Southern Forest Tree Improvement Conference

Treesearch

Robert J. Weir; Alice V. Hatcher; [Compilers

1995-01-01

The 23rd Southern Forest Tree Improvement Conference was held at the Holiday Inn SunSpree Resort in Asheville, North Carolina. The Conference was sponsored by the Southern Forest Tree Improvement Committee and hosted by the N. C. State University-Industry Cooperative Tree Improvement Program. A total of 37 presentations, three invited and 34 voluntary, were given....

Report on the 31st Southern Forest Tree Improvement Conference (SFTIC)

Treesearch

C. Dana Nelson; Randall J Rousseau; Joshua P Adams; M. Cetin Yuceer

2012-01-01

The 31st Southern Forest Tree Improvement Conference was held 14-16 June 2011 in Biloxi, MS, USA. This marks 60 years of biennial technical conferences supported by the Southern Forest Tree Improvement Committee. The theme of the conference was tree improvement opportunities and challenges in the economy emerging around cellulosic biomass, bioproducts, and biofuels....

Proceedings: third lake states forest tree improvement conference

Treesearch

Forest Service U.S.

1958-01-01

The Third Lake States Forest Tree Improvement Conference culminated the activities of the Lake States Forest Tree Improvement Committee and offered an opportmity to report on committee work for the past biennium. It also provided an important means for the Committee to meet its major objective - the encouraging and coordinating of forest tree improvement activities in...

Cereal Production Ratio and NDVI in Spain

NASA Astrophysics Data System (ADS)

Saa-Requejo, Antonio; Recuero, Laura; Palacios, Alicia; Díaz-Ambrona, Carlos G. H.; Tarquis, Ana M.

2014-05-01

Droughts are long-term phenomena affecting large regions causing significant damages both in human lives and economic losses. The use of remote sensing has proved to be very important in monitoring the growth of agricultural crops and trying to asses weather impact on crop loss. Several indices has been developed based in remote sensing data being one of them the normalized difference vegetation index (NDVI). In this study we have focus to know the correlation between NDVI data and the looses of rain fed cereal in the Spanish area where this crop is majority. For this propose data from drought damage in cereal come from the pool of agricultural insurance in Spain (AGROSEGURO) including 2007/2008 to 2011/2012 (five agricultural campaigns). This data is given as a ratio between drought party claims against the insured value of production aggregated at the agrarian region level. Medium resolution (500x500 m2) MODIS images were used during the same campaigns to estimate the eight-day composites NDVI at these locations. The NDVI values are accumulated following the normal cycle of the cereal taking in account the sowing date at different sites. At the same time, CORINE Land Cover (2006) was used to classify the pixels belonging to rain fed cereal use including a set of conditions such as pixels showing dry during summer, area in which there has been no change of use. Fallow presence is studied with particular attention as it imposes an inter annual variation between crop and bare soil and causes decreases in greenness in a pixel and mix both situations. This is more complex in the situation in which the avoid fallow and a continuous monoculture is performed. The results shown that around 40% of the area is subject to the regime of fallow while 60% have growing every year. In addition, another variation is detected if the year is humid (decrease of fallow) or dry (increase of fallow). The level of correlation between the drought damage ratios and cumulative NDVI for the cereal campaign obtained are classified according to their level of significance at 99, 95, 90 and 85%. Approximately half of the regions with high surface assurance have meaningful relationships. In the regions where no significant relationships are achieved several situations are discussed such as extreme situations in critical phenological periods that could have great influence on the final yields. Acknowledgements. This work was partially supported by ENESA under project P10 0220C-823.

75 FR 48927 - Sierra National Forest, Bass Lake Ranger District, California, Fish Camp Project

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-12

... stocked and thinning is needed. This thinning is needed to reduce inter-tree competition and improve tree... densities are above what can be sustained, with inter-tree competition increasing and tree vigor beginning... communities and reduce inter tree competition to improve tree vigor and increase stand resistance to drought...

Habitat Evaluation Procedures (HEP) Report : Oleson Tracts of the Tualatin River National Wildlife Refuge, 2001-2002 Technical Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allard, Donna; Smith, maureen; Schmidt, Peter

Located in the northern Willamette River basin, Tualatin River National Wildlife Refuge (Refuge) was established in 1992 with an approved acquisition boundary to accommodate willing sellers with potentially restorable holdings within the Tualatin River floodplain. The Refuge's floodplain of seasonal and emergent wetlands, Oregon ash riparian hardwood, riparian shrub, coniferous forest, and Garry oak communities are representative of remnant plant communities historically common in the Willamette River valley and offer an opportunity to compensate for wildlife habitat losses associated with the Willamette River basin federal hydroelectric projects. The purchase of the Oleson Units as additions to the Refuge using Bonnevillemore » Power Administration (BPA) funds will partially mitigate for wildlife habitat and target species losses incurred as a result of construction and inundation activities at Dexter and Detroit Dams. Lands acquired for mitigation of Federal Columbia River Power System (FCRPS) impacts to wildlife are evaluated using the Habitat Evaluation Procedures (HEP) methodology, which quantifies how many Habitat Units (HUs) are to be credited to BPA. HUs or credits gained lessen BPA's debt, which was formally tabulated in the FCRPS Loss Assessments and adopted as part of the Northwest Power and Conservation Council's Fish and Wildlife Program as a BPA obligation (NWPCC, 1994 and 2000). There are two basic management scenarios to consider for this evaluation: (1) Habitats can be managed without restoration activities to benefit wildlife populations, or (2) Habitats can be restored using a number of techniques to improve habitat values more quickly. Without restoration, upland and wetland areas may be periodically mowed and disced to prevent invasion of exotic vegetation, volunteer trees and shrubs may grow to expand forested areas, and cooperative farming may be employed to provide forage for migrating and wintering waterfowl. Abandoned cropland would comprise over half the total acreage and may be mowed or hayed to reduce exotic vegetation. Grasslands and wetlands may similarly be mowed or hayed, or left fallow. Wetlands would be subject to periodic flooding from the Tualatin River, but would drain quickly and promote undesirable vegetation. Riverine, forested wetland, and mixed forest habitats would likely change little from their current condition. Active restoration would include restoring wetlands with limited use of dikes and water control structures; planting and maintaining native grass, trees, and shrubs; and aggressive management of non-native invasive vegetation. Hydrology would be restored to emergent wetlands mimicking natural cycles thus promoting hydrophytic vegetation beneficial to fish and wildlife. Grassland and former crop areas would be planted with native grasses and trees to recreate prairie and savanna habitat types. Riverine riparian and forested wetland areas would be expanded by planting native trees and shrubs benefiting a multitude of species. Although a 'hands off' approach may provide habitat benefits after many decades, a more proactive approach would provide far more benefits to fish and wildlife, and thus would provide additional habitat credits more quickly.« less

Boosted classification trees result in minor to modest improvement in the accuracy in classifying cardiovascular outcomes compared to conventional classification trees

PubMed Central

Austin, Peter C; Lee, Douglas S

2011-01-01

Purpose: Classification trees are increasingly being used to classifying patients according to the presence or absence of a disease or health outcome. A limitation of classification trees is their limited predictive accuracy. In the data-mining and machine learning literature, boosting has been developed to improve classification. Boosting with classification trees iteratively grows classification trees in a sequence of reweighted datasets. In a given iteration, subjects that were misclassified in the previous iteration are weighted more highly than subjects that were correctly classified. Classifications from each of the classification trees in the sequence are combined through a weighted majority vote to produce a final classification. The authors' objective was to examine whether boosting improved the accuracy of classification trees for predicting outcomes in cardiovascular patients. Methods: We examined the utility of boosting classification trees for classifying 30-day mortality outcomes in patients hospitalized with either acute myocardial infarction or congestive heart failure. Results: Improvements in the misclassification rate using boosted classification trees were at best minor compared to when conventional classification trees were used. Minor to modest improvements to sensitivity were observed, with only a negligible reduction in specificity. For predicting cardiovascular mortality, boosted classification trees had high specificity, but low sensitivity. Conclusions: Gains in predictive accuracy for predicting cardiovascular outcomes were less impressive than gains in performance observed in the data mining literature. PMID:22254181

Forest Tree Improvement Research in the South and Southeast

Treesearch

Keith W. Dorman

1966-01-01

The Committee on Southern Forest Tree improvement has directed its Subcommittee on Tree Selection and Breeding to summarize the projects by agencies doing forest tree improvement research in the South and Southeast. This area corresponds roughly to what is known as the southern pine region. The project summaries and the consolidated report were to be patterned after...

Lungworm (Nematoda: Protostrongylidae) infection in wild and domestic ruminants from Małopolska region of Poland.

PubMed

Kowal, Jerzy; Kornaś, Sławomir; Nosal, Paweł; Basiaga, Marta; Wajdzik, Marek; Skalska, Marta; Wyrobisz, Anna

2016-01-01

The conducted study has focused on domestic, as well as wild ruminant species. The post mortem examination was carried out on 68 animals, including three wild species: roe deer (Capreolus capreolus) (25 indyviduals), red deer (Cervus elaphus) (6), fallow deer (Dama dama) (5) and two domestic: sheep (Ovis aries) (14) and cattle (Bos taurus) (18). Some of the species have also been investigated in the field by the coproscopical analyses. The faecal samples from roe deer (27), fallow deer (20), red deer (36) and moose (Alces alces) (10) were collected from the environment, while from sheep (10) and goat (Capra hircus) (10)--per rectum. Based on the obtained results the following values were calculated: prevalence, mean intensity and intensity range. The post mortem examination did not reveal pulmonary nematodes neither in domestic nor in wild ungulates, however, the larvae of aforementioned parasites were often stated in the stool samples taken from the environment. All wild species, except fallow deer were infected. Consequently, six species of lungworms have been identified. The first stage larvae of Varestrongylus capreoli occurred in 11 samples of roe deer and Varestrongylus alces in one moose. The larvae of Elaphostrongylus cervi were found in 19 red deer and Varestrongylus sagittatus in 3. Furthermore, Elaphostrongylus alces larvae were noted in 6 moose. Within domestic ruminants only one sheep and two goats were infected by Muellerius capillaris.

Agricultural Water Conservation in the Colorado River Basin: Alternatives to Permanent Fallowing Research Synthesis and Outreach Workshops

NASA Astrophysics Data System (ADS)

Udall, B. H.; Peterson, G.

2017-12-01

As increasing water scarcity occurs in the Colorado River Basin, water users have been looking for new sources of supply. The default solution is to transfer water from the cheapest and most plentiful source — agriculture — to supply new water demands in the region. However, if pursued in haste, and without sufficient information, the likely outcome may be permanent fallowing, along with serious economic disruption to agricultural communities, loss of valuable farmland, loss of important amenity values, and a loss of a sense of place in many rural communities within the basin. This project was undertaken to explore ways to minimize harm to agriculture if transfers out of agriculture were to occur. Four detailed synthesis reports of the four common methods used to temporarily transfer water from agriculture were produced by the project. The water saving methods covered by the reports are: (1) Deficit Irrigation of Alfalfa and other Forages; (2) Rotational Fallowing; (3) Crop Switching; and (4) Irrigation Efficiency and Water Conservation After the reports were drafted, three workshops were held, one in the Upper Basin in Grand Junction on November 4, 2016, one in the Lower Basin in Tucson on March 29, 2017, and one in Washington, DC on May 16, 2017 to disseminate the findings. Over 100 people attended these workshops.

Plant-mediated effects on extracellular enzyme activities in distinct soil aggregate size classes in field

NASA Astrophysics Data System (ADS)

Kumar, Amit; Dorodnikov, Maxim; Splettstößer, Thomas; Kuzyakov, Yakov; Pausch, Johanna

2017-04-01

Soil aggregation and microbial activities within the aggregates are important factors regulating soil carbon (C) turnover. A reliable and sensitive proxy for microbial activity is activity of extracellular enzymes (EEA). In the present study, effects of soil aggregates on EEA were investigated under three maize plant densities (Low, Normal, and High). Bulk soil was fractionated into three aggregate size classes (>2000 µm large macroaggregates; 2000-250 µm small macroaggregates; <250 µm microaggregates) by optimal-moisture sieving. Microbial biomass and EEA (β-1,4-glucosidase (BG), β-1,4-N-acetylglucosaminidase (NAG), L-leucine aminopeptidase (LAP) and acid phosphatase (acP)) catalyzing soil organic matter (SOM) decomposition were measured in rooted soil of maize and soil from bare fallow. Microbial biomass C (Cmic) decreased with decreasing aggregate size classes. Potential and specific EEA (per unit of Cmic) increased from macro- to microaggregates. In comparison with bare fallow soil, specific EEA of microaggregates in rooted soil was higher by up to 73%, 31%, 26%, and 92% for BG, NAG, acP and LAP, respectively. Moreover, high plant density decreased macroaggregates by 9% compared to bare fallow. Enhanced EEA in three aggregate size classes demonstrated activation of microorganisms by roots. Strong EEA in microaggregates can be explained by microaggregates' localization within the soil. Originally adhering to surfaces of macroaggregates, microaggregates were preferentially exposed to C substrates and nutrients, thereby promoting microbial activity.

Pyrosequencing of microbial community of typical chernozem in contrast land use conditions

NASA Astrophysics Data System (ADS)

Ivanova, Ekaterina; Olga, Kutovaya; Azida, Tkhakakhova

2015-04-01

Chernozems are the principal soil resourse of Russia, so the sustainable use of these fertile soils in the intensive agriculturural production is of great importance, especially in terms of agro-ecological security of the country. The increase in agricultural inputs - intensive cropping, soil fallowing application accompanied with high frequency of mechanical treatment, result in decrease in soil organic matter content as well as soil structure degradation and, finally, lead to the loss of soil fertility. Soil microorganisms can serve as bioindicators of anthropogenic stress experienced by the soil during its agricultural use, so they may be universal indicators of soil quality (soil health) used for optimization and biologization of agricultural systems. The way to study the relationship between the structural status of the soil, its microbial communities and the organic matter content is the comparative analysis of soil aggregates in conditions of different land use practices. The objects of our research were soil samples of soil with permanent wheat cropping (50 years), continuous dead fallow (50 years) soil, and recovering soil (for 18 years under native steppe vegetation, fallowed in previous). The analysis of 16 S rRNA gene amplicon libraries of typical chernozem in conditions of different land use systems revealed that the way of agricultural use is a strong determinant of soil microbiome taxonomic composition. It was shown that the continuous «dead fallowing» application (for 50 years) lead to the establishment of olygothrophic components of microbial community, including spore-forming members of phylum Firmicutes. The increase of Acidobacteria lineages in this variant may be an indicator of some acidification of soil during long-time fallowing application. The variant of continuous wheat cropping lead to increasing in Proteobacteria lineages. The variant of soil under native steppe vegetation was characterized by the highest values of biodiversity indices - species richness and eveness, which can indicate the occurrence of soil recovering. This variant was also characterized by the maximum content of agricultural valuable aggregate fraction of 2-5 mm size. In soil samples from different aggregate fractions the presence of accessory components was revealed. It was determined that Actinobacteria lineages preferred microaggregates (less than 0.25 mm) rather than coarse aggregate fractions (more than 7 mm). The opposite trend was determined for Proteobacteria: the amount was maximum in aggregates more than 7 mm in diameter. The occurrence of specific components in the taxonomic structure of micro-and macro-aggregates may indicate the presence of a certain size fraction in the structure of the investigated soil. The study of soils' metagenome is promising for the development of both soil microbiology, and for the soil processes trends in soils of anthropogenic origin. The study was supported by Russian Scientific Fund (14-26-00079 and 14-26-00094)

The energetic and chemical fingerprints of persistent soil organic carbon

NASA Astrophysics Data System (ADS)

Barré, Pierre; Plante, Alain F.; Cécillon, Lauric; Lutfalla, Suzanne; Baudin, François; Bernard, Sylvain; Christensen, Bent T.; Fernandez, Jose M.; Houot, Sabine; Kätterer, Thomas; Macdonald, Andy; van Oort, Folkert; Le Guillou, Corentin; Chenu, Claire

2016-04-01

A better understanding of soil organic carbon (SOC) persistence is needed to better predict SOC vulnerability to global change. The absence of convincing physical or chemical procedures to define, characterize or isolate relatively labile versus persistent SOC pools makes the study of persistent SOC difficult. Long-term bare fallow (LTBF) experiments, in which C inputs have been stopped for several decades, provide a unique opportunity to study persistent SOC without the inherent artefacts induced by extraction procedures, the hypothesis being that SOC is gradually enriched in persistent C with time as labile components decompose. We determined the evolution of thermal and chemical characteristics of bulk SOC in five LTBF experiments across Europe: Askov (DK), Grignon (FR), Rothamsted (UK), Ultuna (SW) and Versailles (FR), using a multi-technique approach involving Rock-Eval pyrolysis, thermogravimetry and differential scanning calorimetry (TG-DSC), mid-infrared diffuse reflectance spectroscopy (DRIFT-MIRS), and Near Edge X-Ray Absorption Fine Structure (NEXAFS). Results of Rock-Eval and TG analyses showed that the temperature needed to combust the SOC increased with bare fallow duration at all sites. Conversely, SOC energy density (in mJ mg-1 C) measured by DSC decreased with bare fallow duration. Rock-Eval pyrolysis results showed that hydrogen index (HI) tended to decrease with bare fallow duration whereas the oxygen index (OI) did not show consistent trends across sites. NEXAFS signals presented little differences and were dominated by carboxyl peak. Nonetheless, NEXAFS results showed a trend of increasing carboxyl groups and decreasing ketone and amide groups with bare fallow duration. Due to the mineral matrix, only a reduced part of the DRIFT-MIRS signals has been used. We observed that the bulk chemistry of aliphatic SOC (CH3 vs. CH2 functional groups) showed different trends for the different sites. Our results showed that in spite of the heterogeneity of the soils at the 5 LTBF sites, organic carbon that has persisted in soils for several decades have similar and defined thermal and energetic properties: persistent SOC burns at higher temperature and its combustion generates less energy. Persistent SOC in the studied temperate soils also shares some chemical properties: it has a lower HI values and is consistently enriched in carboxyl groups. Nonetheless, the chemical trends were less obvious than the results given by thermal techniques confirming that organo-mineral interactions are the key driver of long-term SOC stabilization. The increased burning temperature and lower energy density of persistent SOC suggest that SOC stability may be a function of the high energy cost and low energy gain from decomposition of this material. It also suggests that decomposition of the stable C pool should be more temperature sensitive and thus vulnerable to increased temperature as previously observed in several incubation studies.

Sensitivity Analysis in Agent-Based Models of Socio-Ecological Systems: An Example in Agricultural Land Conservation for Lake Water Quality Improvement

NASA Astrophysics Data System (ADS)

Ligmann-Zielinska, A.; Kramer, D. B.; Spence Cheruvelil, K.; Soranno, P.

2012-12-01

Socio-ecological systems are dynamic and nonlinear. To account for this complexity, we employ agent-based models (ABMs) to study macro-scale phenomena resulting from micro-scale interactions among system components. Because ABMs typically have many parameters, it is challenging to identify which parameters contribute to the emerging macro-scale patterns. In this paper, we address the following question: What is the extent of participation in agricultural land conservation programs given heterogeneous landscape, economic, social, and individual decision making criteria in complex lakesheds? To answer this question, we: [1] built an ABM for our model system; [2] simulated land use change resulting from agent decision making, [3] estimated the uncertainty of the model output, decomposed it and apportioned it to each of the parameters in the model. Our model system is a freshwater socio-ecological system - that of farmland and lake water quality within a region containing a large number of lakes and high proportions of agricultural lands. Our study focuses on examining how agricultural land conversion from active to fallow reduces freshwater nutrient loading and improves water quality. Consequently, our ABM is composed of farmer agents who make decisions related to participation in a government-sponsored Conservation Reserve Program (CRP) managed by the Farm Service Agency (FSA). We also include an FSA agent, who selects enrollment offers made by farmers and announces the signup results leading to land use change. The model is executed in a Monte Carlo simulation framework to generate a distribution of maps of fallow lands that are used for calculating nutrient loading to lakes. What follows is a variance-based sensitivity analysis of the results. We compute sensitivity indices for individual parameters and their combinations, allowing for identification of the most influential as well as the insignificant inputs. In the case study, we observe that farmland conservation is first and foremost driven by the FSA signup choices. Environmental criteria used in FSA offer selection play a secondary role in farmland-to-fallow-land conversion. Farmer decision making is mainly influenced by the willingness to reduce the potential annual rental payments. As the case study demonstrates, our approach leads to ABM simplification without the loss of outcome variability. It also shows how to represent the magnitude of ABM complexity and isolate the effects of the interconnected explanatory variables on the simulated emergent phenomena. More importantly, the results of our research indicate that some of the parameters exert influence on model outcomes only if analyzed in combination with other parameters. Without evaluating the interaction effects among inputs, we risk losing important functional relationships among ABM components and, consequently, we potentially reduce its explanatory power.

The Minnesota Tree Improvement Cooperative

Treesearch

Andrew David

2002-01-01

As the director of the Minnesota Tree Improvement Cooperative (MTIC) based in Cloquet, Minnesota, I would like to tell you a little about our strategy for creating improved seed, and how individual nurseries or nursery associations can interact with tree improvement programs to the benefit of both parties. MTIC is approximately 15 miles west of Duluth, at the...

Influence of land use on rainfall simulation results in the Souss basin, Morocco

NASA Astrophysics Data System (ADS)

Peter, Klaus Daniel; Ries, Johannes B.; Hssaine, Ali Ait

2013-04-01

Situated between the High and Anti-Atlas, the Souss basin is characterized by a dynamic land use change. It is one of the fastest growing agricultural regions of Morocco. Traditional mixed agriculture is replaced by extensive plantations of citrus fruits, bananas and vegetables in monocropping, mainly for the European market. For the implementation of the land use change and further expansion of the plantations into marginal land which was former unsuitable for agriculture, land levelling by heavy machinery is used to plane the fields and close the widespread gullies. These gully systems are cutting deep between the plantations and other arable land. Their development started already over 400 years ago with the introduction of sugar production. Heavy rainfall events lead to further strong soil and gully erosion in this with 200 mm mean annual precipitation normally arid region. Gullies are cutting into the arable land or are re-excavating their old stream courses. On the test sites around the city of Taroudant, a total of 122 rainfall simulations were conducted to analyze the susceptibility of soils to surface runoff and soil erosion under different land use. A small portable nozzle rainfall simulator is used for the rainfall simulation experiments, quantifying runoff and erosion rates on micro-plots with a size of 0.28 m2. A motor pump boosts the water regulated by a flow metre into the commercial full cone nozzle at a height of 2 m. The rainfall intensity is maintained at about 40 mm h-1 for each of the 30 min lasting experiments. Ten categories of land use are classified for different stages of levelling, fallow land, cultivation and rangeland. Results show that mean runoff coefficients and mean sediment loads are significantly higher (1.4 and 3.5 times respectively) on levelled study sites compared to undisturbed sites. However, the runoff coefficients of all land use types are relatively equal and reach high median coefficients from 39 to 56 %. Only the rainfall simulations underneath mandarin trees in a plantation show with 10 % low coefficients. The results are stronger differentiated for the sediment loads. On levelled areas, the simulations reach median sediment loads of 41 and 61 g m-2 respectively. In spite of high runoff coefficients, the lowest sediment loads of around 4.5 g m-2 are measured on old fallow land (>5 y.) and rangeland which are both protected by biological crusts. The same low result is found on the mandarin plantation. On other younger fallow land (1-2, 2-5 y.) as well as on stone covered badlands and sundry anthropogenic influenced soils medium soil losses between 18 and 25 g m-2 are reached. On sparsely vegetated grain fields, soil erosion is because of initiated crusting despite lower runoff coefficients with 30 g m-2 still high. Land-levelling measures have the greatest influence on rainfall simulation results. Although runoff coefficients on almost all land use types are similar, clear differences of soil erosion due to different land use can be identified.

Cascading effect of economic globalization on human risks of scrub typhus and tick-borne rickettsial diseases.

PubMed

Kuo, Chi-Chien; Huang, Jing-Lun; Shu, Pei-Yun; Lee, Pei-Lung; Kelt, Douglas A; Wang, Hsi-Chieh

2012-09-01

The increase in global travel and trade has facilitated the dissemination of disease vectors. Globalization can also indirectly affect vector-borne diseases through the liberalization of cross-border trade, which has far-reaching, worldwide effects on agricultural practices and may in turn influence vectors through the modification of the ecological landscape. While the cascading effect of economic globalization on vector-borne diseases, sometimes acting synergistically with regional agricultural policy, could be substantial and have significant economic, agricultural, and public health implications, research into this remains very limited. We evaluated how abandonment of rice paddies in Taiwan after joining the World Trade Organization, along with periodic plowing, an agricultural policy to reduce farm pests in abandoned fields can unexpectedly influence risks to diseases transmitted by ticks and chiggers (larval trombiculid mites), which we collected from their small-mammal hosts. Sampling was limited to abandoned (fallow) and plowed fields due to the challenge of trapping small mammals in flooded rice paddies. Striped field mice (Apodemus agrarius) are the main hosts for both vectors. They harbored six times more ticks and three times more chiggers in fallow than in plowed plots. The proportion of ticks infected with Rickettsia spp. (etiologic agent of spotted fever) was three times higher in fallow plots, while that of Orientia tsutsugamushi (scrub typhus) in chiggers was similar in both treatments. Fallow plots had more ground cover and higher vegetation than plowed ones. Moreover, ticks and chiggers in both field types were dominated by species known to infest humans. Because ticks and chiggers should exhibit very low survival in flooded rice paddies, we propose that farm abandonment in Taiwan, driven by globalization, may have inadvertently led to increased risks of spotted fever and scrub typhus. However, periodic plowing can unintentionally mitigate vector burdens. Economic globalization can have unexpected consequences on disease risk through modification of the agricultural landscape, but the outcome may also be influenced by agricultural policies, calling for further research on vector-borne diseases and their control from broader perspectives.

Carbon sequestration in dryland soils and plant residue as influenced by tillage and crop rotation.

PubMed

Sainju, Upendra M; Lenssen, Andrew; Caesar-Thonthat, Thecan; Waddell, Jed

2006-01-01

Long-term use of conventional tillage and wheat (Triticum aestivum L.)-fallow systems in the northern Great Plains have resulted in low soil organic carbon (SOC) levels. We examined the effects of two tillage practices [conventional till (CT) and no-till (NT)], five crop rotations [continuous spring wheat (CW), spring wheat-fallow (W-F), spring wheat-lentil (Lens culinaris Medic.) (W-L), spring wheat-spring wheat-fallow (W-W-F), and spring wheat-pea (Pisum sativum L.)-fallow (W-P-F)], and Conservation Reserve Program (CRP) planting on plant C input, SOC, and particulate organic carbon (POC). A field experiment was conducted in a mixture of Scobey clay loam (fine-loamy, mixed, Aridic Argiborolls) and Kevin clay loam (fine, montmorillonitic, Aridic Argiborolls) from 1998 to 2003 in Havre, MT. Total plant biomass returned to the soil from 1998 to 2003 was greater in CW (15.5 Mg ha(-1)) than in other rotations. Residue cover, amount, and C content in 2004 were 33 to 86% greater in NT than in CT and greater in CRP than in crop rotations. Residue amount (2.47 Mg ha(-1)) and C content (0.96 Mg ha(-1)) were greater in NT with CW than in other treatments, except in CT with CRP and W-F and in NT with CRP and W-W-F. The SOC at the 0- to 5-cm depth was 23% greater in NT (6.4 Mg ha(-1)) than in CT. The POC was not influenced by tillage and crop rotation, but POC to SOC ratio at the 0- to 20-cm depth was greater in NT with W-L (369 g kg(-1) SOC) than in CT with CW, W-F, and W-L. From 1998 to 2003, SOC at the 0- to 20-cm depth decreased by 4% in CT but increased by 3% in NT. Carbon can be sequestered in dryland soils and plant residue in areas previously under CRP using reduced tillage and increased cropping intensity, such as NT with CW, compared with traditional practice, such as CT with W-F system, and the content can be similar to that in CRP planting.

Trends in shortleaf pine tree improvement

Treesearch

Robert N. Kitchens

1986-01-01

Tree improvement programs of shortleaf pine (Pinus echinata Mill.) have developed over the past 25 years to the point that virtually all demand for planting stock is met with genetically improved trees. About 22,600 acres of improved stock are planted each year. Although shortleaf has the largest geographic range of any southern pine, it is not being promoted in...

Who pays for tree improvement?

Treesearch

Tom D. Byram; E. M. Raley

2011-01-01

Tree improvement has been one of the most successful collaborative research efforts in history, eliciting participation from a wide variety of players. This effort has included state forestry agencies, research universities, integrated forest industries, and the USDA Forest Service. Tree improvement was organized through cooperatives whose objectives were to distribute...

Population Dynamics of Belonolaimus longicaudatusin a Cotton Production System

PubMed Central

Crow, W. T.; Weingartner, D. P.; McSorley, R.; Dickson, D. W.

2000-01-01

Belonolaimus longicaudatus is a recognized pathogen of cotton (Gossypium hirsutum), but insufficient information is available on the population dynamics and economic thresholds of B. longicaudatus in cotton production. In this study, data collected from a field in Florida were used to develop models predicting population increases of B. longicaudatus on cotton and population declines under clean fallow. Population densities of B. longicaudatus increased on cotton, reaching a carrying capacity of 139 nematodes/130 cm³ of soil, but decreased exponentially during periods of bare fallow. The model indicated that population densities should decrease each year of monocropped cotton, if an alternate host is not present between sequential cotton crops. Economic thresholds derived from published damage functions and current prices for cotton and nematicides varied from 2 to 5 B. longicaudatus/130 cm³ of soil, depending on the nematicide used. PMID:19270968

Effects of Carbon and Cover Crop Residues on N2O and N2 Emissions

NASA Astrophysics Data System (ADS)

Burger, M.; Cooperman, Y.; Horwath, W. R.

2016-12-01

In Mediterranean climate, nitrous oxide emissions occurring with the first rainfall after the dry summer season can contribute up to 50% of agricultural systems' total annual emissions, but the drivers of these emissions have not been clearly identified, and there are only few measurements of atmospheric nitrogen (N2) production (denitrification) during these events. In lab incubations, we investigated N2O and N2 production, gross ammonification and nitrification, and microbial N immobilization with wet-up in soil from a vineyard that was previously fallow or where cover crop residue had been incorporated the previous spring. Before the first rainfall, we measured 120 mg dissolved organic carbon (DOC-C) kg-1 soil in the 0-5 cm layer of this vineyard, and after the rain 10 mg DOC-C kg-1, while nitrate levels before the rain were <5 mg N kg-1 in fallow and <10 mg N kg-1 in previously cover cropped soil. The N2O/N2 production was 2, 7, 9, and 86% in fallow, legume-grass mixture, rye, and legume cover cropped soil. The N2O/N2 ratio tended to increase with lower DOC (post-rain) levels in the soil. The results suggest that accumulated carbon in dry surface soil is the main driving factor of N2O and N2 emissions through denitrification with the first rainfall after prolonged dry periods.

Population dynamics of plant nematodes in cultivated soil: length of rotation in newly cleared and old agricultural land.

PubMed

Good, J M; Murphy, W S; Brodie, B B

1973-04-01

During a 6-year study of 1-, 2-, and 3-year crop rotations, population densities of Pratylenchus brachyurus, Trichodorus christiei, and Meloidogyne incognita were significantly affected by the choice of crops but not by length of crop rotation. The density of P. brachyurus and T. christiei increased rapidly on milo (Sorghum vulgate). In addition, populations of P. brachyurus increased significantly in cropping systems that involved crotalaria (C. rnucronata), millet (Setaria italica), and sudangrass (Sorghum sudanense). Lowest numbers of P. brachyurus occurred where okra (Hibiscus esculentus) was grown or where land was fallow. The largest increase in populations of T. christiei occurred in cropping systems that involved millet, sudangrass, and okra whereas the smallest increase occurred in cropping systems that involved crotalaria or fallow. A winter cover of rye (Secale cereale) had no distinguishable effect on population densities of P. brachyurus or T. christiei. Meloidogyne incognita was detected during the fourth year in both newly cleared and old agricultural land when okra was included in the cropping system. Detectable populations of M. incognita did not develop in any of the other cropping systems. Yields of tomato transplants were higher on the newly cleared land than on the old land. Highest yields were obtained when crotalaria was included in the cropping system. Lowest yields were obtained when milo, or fallow were included in the cropping system. Length of rotation had no distinguishable effect on yields of tomato transplants.

Seasonal variation of carbon dioxide and methane exchange between rice paddy fields and atmosphere in Japan

NASA Astrophysics Data System (ADS)

Kokubo, R.

2017-12-01

Rice paddy fields spread throughout Asia and play an important role in terms of regulating greenhouse gases on the ground. Rice paddies have the potential to either increase or decrease the net balance of greenhouse gases in the atmosphere. In the rice growth period, rice paddy fields are sources of CH4, whereas they generally act as a sink of CO2. However, the behavior of greenhouse gases during fallow periods has not been well understood. A field experiment was conducted at a rice paddy field in Fuchu, central Japan in 2014. We evaluated CO2 and CH4 fluxes in the rice paddy field using the eddy covariance method. Except for 20 days after transplanting (DAT), temporal CO2 fluxes showed negative values during a rice growth period whereas they showed positive values throughout a fallow period. The positive CO2 fluxes at 2 emissions by respiration of rice plants and soil microorganisms than CO2 uptake by photosynthesis of rice plants. In the middle of the growing season at around DAT=50, CO2 emission became dominant again because flooded water was temporarily drained in the rice paddy field. Seasonal CH4 fluxes during a growth period were regulated by water management and plant growth stages. During a fallow period, however, the field was kept a non-flooded condition that resulted in an aerobic soil condition and thus very low CH4 emission.

Assessment of soil quality in different ecosystems (with soils of Podolsk and Serpukhov districts of Moscow oblast as examples)

NASA Astrophysics Data System (ADS)

Gavrilenko, E. G.; Ananyeva, N. D.; Makarov, O. A.

2013-12-01

The values of the soil-ecological index and microbiological parameters (the carbon of microbial biomass Cmic, its ratio to the total organic carbon Cmic/Corg, and basal respiration) were determined for the soddy-podzolic, soddy-gley, bog-podzolic, meadow alluvial, and gray forest soils under different land uses (forest, fallow, cropland, and urban areas) in the Podolsk and Serpukhov districts of Moscow oblast (237 and 45 sampling points, respectively). The soil sampling from the upper 10 cm (without the litter horizon) was performed in September and October. To calculate the soil-ecological index, both soil (physicochemical and agrochemical) and climatic characteristics were taken into account. Its values for fallow, cropland, and urban ecosystems averaged 70.2, 72.8, and 64.2 points ( n = 90, 17, and 24, respectively). For the soils of forest ecosystems, the average value of the soil-ecological index was lower (54.4; n = 151). At the same time, the micro-biological characteristics of the studied forest soils were generally higher than those in the soils of fallow, cropland, and urban ecosystems. In this context, to estimate the soil quality in different ecosystems on the basis of the soil-ecological index, the use of a correction coefficient for the biological properties of the soils (the Cmic content) was suggested. The ecological substantiation of this approach for assessing the quality of soils in different ecosystems is presented in the paper.

Trap Nesting Wasps and Bees in Agriculture: A Comparison of Sown Wildflower and Fallow Plots in Florida

PubMed Central

Smithers, Cherice; Irvin, Allyn; Stanley-Stahr, Cory; Daniels, Jaret C.; Ellis, James D.

2017-01-01

Wildflower strip plantings in intensive agricultural systems have become a widespread tool for promoting pollination services and biological conservation because of their use by wasps and bees. Many of the trap-nesting wasps are important predators of common crop pests, and cavity-nesting bees that utilize trap-nests are important pollinators for native plants and many crops. The impact of wildflower strips on the nesting frequency of trap-nesting wasps or bees within localized areas has not been thoroughly investigated. Trap-nests made of bamboo reeds (Bambusa sp.) were placed adjacent to eight 0.1 ha wildflower plots and paired fallow areas (control plots) to determine if wildflower strips encourage the nesting of wasps and bees. From August 2014 to November 2015, occupied reeds were gathered and adults were collected as they emerged from the trap-nests. Treatment (wildflower or fallow plots) did not impact the number of occupied reeds or species richness of trap-nesting wasps using the occupied reeds. The wasps Pachodynerus erynnis, Euodynerus megaera, Parancistrocerus pedestris, and Isodontia spp. were the most common trap-nesting species collected. Less than 2% of the occupied reeds contained bees, and all were from the genus Megachile. The nesting wasp and bee species demonstrated preferences for reeds with certain inside diameters (IDs). The narrow range of ID preferences exhibited by each bee/wasp may provide opportunities to take advantage of their natural histories for biological control and/or pollination purposes. PMID:28994726

Forest tree improvement research in the Lake States, 1965.

Treesearch

Paul O. Rudolf

1966-01-01

Gives brief reports on 133 forest tree improvement research projects conducted by 12 agencies and 8 developmental tree improvement projects being conducted by 4 agencies in Michigan, Minnesota, North Dakota, and Wisconsin. Reports the object, species studied, methods, accomplishments, cooperators, and assignment for each project. Includes indexes by genera and...

The relationship between tree growth patterns and likelihood of mortality: A study of two tree species in the Sierra Nevada

USGS Publications Warehouse

Das, A.J.; Battles, J.J.; Stephenson, N.L.; van Mantgem, P.J.

2007-01-01

We examined mortality of Abies concolor (Gord. & Glend.) Lindl. (white fir) and Pinus lambertiana Dougl. (sugar pine) by developing logistic models using three growth indices obtained from tree rings: average growth, growth trend, and count of abrupt growth declines. For P. lambertiana, models with average growth, growth trend, and count of abrupt declines improved overall prediction (78.6% dead trees correctly classified, 83.7% live trees correctly classified) compared with a model with average recent growth alone (69.6% dead trees correctly classified, 67.3% live trees correctly classified). For A. concolor, counts of abrupt declines and longer time intervals improved overall classification (trees with DBH ???20 cm: 78.9% dead trees correctly classified and 76.7% live trees correctly classified vs. 64.9% dead trees correctly classified and 77.9% live trees correctly classified; trees with DBH <20 cm: 71.6% dead trees correctly classified and 71.0% live trees correctly classified vs. 67.2% dead trees correctly classified and 66.7% live trees correctly classified). In general, count of abrupt declines improved live-tree classification. External validation of A. concolor models showed that they functioned well at stands not used in model development, and the development of size-specific models demonstrated important differences in mortality risk between understory and canopy trees. Population-level mortality-risk models were developed for A. concolor and generated realistic mortality rates at two sites. Our results support the contention that a more comprehensive use of the growth record yields a more robust assessment of mortality risk. ?? 2007 NRC.

Effect of different cover crops on C and N cycling in sorghum NT systems.

PubMed

Frasier, Ileana; Quiroga, Alberto; Noellemeyer, Elke

2016-08-15

In many no-till (NT) systems, residue input is low and fallow periods excessive, for which reasons soil degradation occurs. Cover crops could improve organic matter, biological activity, and soil structure. In order to study changes in soil carbon, nitrogen and microbial biomass a field experiment (2010-2012) was set up with sorghum (Sorghum bicolor Moench.) monoculture and with cover crops. Treatments were control (NT with bare fallow), rye (Secale cereale L.) (R), rye with nitrogen fertilization (R+N), vetch (Vicia villosa Roth.) (V), and rye-vetch mixture (VR) cover crops. A completely randomized block design with 4 replicates was used. Soil was sampled once a year at 0.06 and 0.12m depth for total C, microbial biomass carbon (MBC) and-nitrogen (MBN) determinations. Shoot and root biomass of sorghum and cover crops, litter biomass, and their respective carbon and nitrogen contents were determined. Soil temperatures at 0.06 and 0.12m depth, volumetric water contents and nitrate concentrations were determined at sowing, and harvest of each crop, and during sorghum's vegetative phase. NT led to a small increase in MBC and MBN, despite low litter and root biomass residue. Cover crops increased litter, root biomass, total C, MBC, and MBN. Relationships between MBC, MBN, and root-C and -N adjusted to logistic models (R(2)=0.61 and 0.43 for C and N respectively). Litter cover improved soil moisture to 45-50% water filled pore space and soil temperatures not exceeding 25°C during the warmest month. Microbial biomass stabilized at 20.1gCm(-2) and 1.9gNm(-2) in the upper 0.06m. Soil litter disappearance was a good indicator of mineral N availability. These findings support the view that cover crops, specifically legumes in NT systems can increase soil ecosystem services related to water and carbon storage, habitat for biodiversity, and nutrient availability. Copyright © 2016 Elsevier B.V. All rights reserved.

Improved trees: economic promises and pitfalls

Treesearch

George F. Dutrow

1977-01-01

Surging demands for wood fiber that must be produced on a decreasing acreage of forest land suggest soaring prices, a shrinking market for wood products, or both. Either of these consequences can be forestalled or prevented by implementing existing technologies, one of which is cultivation of genetically improved trees. Multiple and sizable gains from improved trees...

Joint proceedings of the 10th Lake States Forest Tree Improvement Conference & 7th Central States Forest Tree Improvement Conference, September 22-24, 1971.

Treesearch

USDA FS

1973-01-01

Presents 12 papers concerning recent research in forest genetics, physiology, and allied fields. Species discussed include cottonwood, white spruce, jack pine, white pine, aspen, and others. Emphasizes the role of tree improvement in increasing wood-fiber production.

Hardwood genetics and tree improvement - A Midwest USA perspective

Treesearch

C. H. Michler; R. Meilan; K. E. Woeste; P. M. Pijut; D. Jacobs; P. Aldrich; J. Glaubitz

2005-01-01

Fine hardwood trees in the Central Hardwoods region of the United States are an important resource for the furniture, cabinetry, flooring, modular home, and paneling manufacturing industries. Consumers find wood from these trees to be very desirable because of quality factors such as grain, strength and color. To enhance wood production, tree improvement programs can...

The Inference of Gene Trees with Species Trees

PubMed Central

Szöllősi, Gergely J.; Tannier, Eric; Daubin, Vincent; Boussau, Bastien

2015-01-01

This article reviews the various models that have been used to describe the relationships between gene trees and species trees. Molecular phylogeny has focused mainly on improving models for the reconstruction of gene trees based on sequence alignments. Yet, most phylogeneticists seek to reveal the history of species. Although the histories of genes and species are tightly linked, they are seldom identical, because genes duplicate, are lost or horizontally transferred, and because alleles can coexist in populations for periods that may span several speciation events. Building models describing the relationship between gene and species trees can thus improve the reconstruction of gene trees when a species tree is known, and vice versa. Several approaches have been proposed to solve the problem in one direction or the other, but in general neither gene trees nor species trees are known. Only a few studies have attempted to jointly infer gene trees and species trees. These models account for gene duplication and loss, transfer or incomplete lineage sorting. Some of them consider several types of events together, but none exists currently that considers the full repertoire of processes that generate gene trees along the species tree. Simulations as well as empirical studies on genomic data show that combining gene tree–species tree models with models of sequence evolution improves gene tree reconstruction. In turn, these better gene trees provide a more reliable basis for studying genome evolution or reconstructing ancestral chromosomes and ancestral gene sequences. We predict that gene tree–species tree methods that can deal with genomic data sets will be instrumental to advancing our understanding of genomic evolution. PMID:25070970

Net Exchange Ecossistem in Subtropical Agriculture Area in Southern Brazil

NASA Astrophysics Data System (ADS)

Roberti, D. R.; Diaz, M.; Webler, G.; Fiorin, J.; de Moraes, O. L. L.; Teichrieb, C.; Amado, T.

2015-12-01

Southern Brazil contribute to 38% of Brazilian grain production. In contrast with the rest of the country, the south has a wet, subtropical climate that permits two annual harvests (double cropping system). The soybean and/or maize (summer) and black oat and/or wheat (winter) succession is widely used by farmers in plateau areas. In river natural lowlands, the cultivation of flooded irrigated rice is common. Changes in the land use affect the carbon, water and energy balance, and crop management practices, such as fertilization, water management, harvest and crop residues have influence in carbon exchange between the crop field and the atmosphere. This study quantifies the net exchange ecosystem (NEE) between the atmosphere and the crop cultivations in this wide region of Brazil from 2010 to 2014. We use data from two micrometeorological sites: Cruz Alta, with crop rotation and Cachoeira do Sul, with rice paddy. The carbon flux was analyzed using the eddy covariance method and gap filling procedures. The annual integration of data carbon demonstrates that the agroecosystems in southern Brazil is a acting as an light atmospheric CO2 sink. However, the NEE emissions that occurred in the fallow periods contributed negatively for such annual accumulation. To reduce this loss of CO2, farmers could cultivate plants in fallow periods, because there are favorable weather conditions for growing plants year round. Additionally, other management practices can increase the influx of C, including the production of more dry matter with cover crops by improving management and the immediate harvesting of crop after physiological maturity to reduce the period between maturation and harvest.

Variability of physicochemical and mineralogical characteristics of biological soil crusts at local scale in the Sahelian zone of western Niger

NASA Astrophysics Data System (ADS)

Cancès, B.; Gommeaux, G.; Marin, B.; Ponthieu, M.; Ralahimanana, C.; Ayachi, S.; Malam Issa, O.

2012-04-01

Biological soil crusts (BSC) are organo-mineral complexes resulting from the colonisation of soil surface by living microorganisms, mainly cyanobacteria. Their form, structure and composition vary depending on characteristics related to soils, biological composition and external factors (climate conditions and land uses). This study focussed on the influence of soil characteristics and human activities on BSC properties. BSC samples from Banizoumbou (Niger) taken on protected (ungrazed) and opened (grazed) fallow lands were analysed. BSC characteristics were investigated by using chemical and mineralogical techniques, microscopic and image analysis approach as well as measurements of chlorophyll a content. Hydrophobicity measurements were also performed by the water drop penetration time method. On the basis of their colour, two types of crusts have been identified : black BSC, which occur in protected and unprotected fallow, and red BSC, which only occur in depression zones of the protected fallow. The black crusts are dominated by quartz grains trapped in the network of the filaments of Cyanobacteria. A sandy texture and a reverse grading of mineral particles are typical of physical soil crusts called sieving crusts. The dark surface coloration of the BSC is related to the high density of filamentous Cyanobacteria. Black crusts samples from protected fallow exhibit high biomass related to high cover, whereas samples from grazed fallow lands showed low biomass related to low surface cover. In both cases, hydrophobicity measurements revealed that these BSC are wettable to slightlty water repellent. However, higher values of hydrophobicity were observed on ungrazed samples compared to their grazed counterpart. This variability is likely due to the difference of cover between the two types of samples. This type of BSC corresponds to a later successional stage than the red-coloured BSC. The red BSC has a loamy-sandy texture and a normal grading typical of physical soil crusts called depositional crusts. Its mineralogy differs from the black crusts by its higher proportions of clay minerals and iron oxides (higher amounts of Al2O3 and Fe2O3). A vertical succession of BSC leads to higher content of organic carbon. The trace elements contents are also higher in this type of crust. The red colour is related to the low surface cover by Cyanobacteria. High values of hydrophobicity were measured for the red crusts, which are slightly to strongly water repellent. Compared to the underlying soil horizons, the two types of BSC differ granulometrically (higher proportions of clay and loam), mineralogically and chemically (lower SiO2 content and higher Al2O3, Fe2O3, organic carbon and trace elements contents). These results will contribute to the understanding of water dynamics at the surface of soil in the Sahelian region of Niger. They will also contribute in understanding the potential ecological roles and the spatial extent of BSC in Sahelian environment.

Post-oil-spill fires at Ugbomro (Niger Delta): a new vista in soil-pollution studies.

PubMed

Osuji, Leo C; Ukale, Eseoghene E

2005-10-01

Reconnaissance of the post-oil-spill, fire-scourged site at Ugbomro, in the Niger Delta, was contingent upon the loud public outcry and galvanizing hue that ensued the widespread conflagration. Sampling was carried out by the grid technique, and fire-scourged soils and their unaffected controls were analyzed. Contrary to the 'celebrated' opinion of some that the fires improvised bush fallowing for cropping, the site had witnessed severe impoverishment as evidenced by the hitherto neglected insidious impact of such infernos on soil macronutrients. Alterations in physico-chemical properties (pH, conductivity, etc.) provided adequate bases for this conclusion, and offered broad explanations for the paucity of macronutrients in affected soils. For instance, a pH range of 3.1-3.8 hindered N2 fixation and other metabolic activities that enhance mineralization. Elaeis guineensis in a density of 3 stands/m2 at the control site was the only tree-form not charred beyond recognition.Against future fires, it is important to strengthen contingencies for more-expedient clean-up responses to oil spills to severe possibilities of in situ conflagrations. Nutrient supplementations, revegetation, and site surveillance should disengage the 'unsighted fingers' of sabotage. A careful husbandry of these measures might re-establish nutrient stability, and forestall future re-occurrence of such effacing incidents.

Proceedings of the fourth Lake States forest tree improvement conference

Treesearch

Lake States Forest Experiment Station

1960-01-01

The Lake States Forest Experiment Station is glad to facilitate the work of the Lake States Forest Tree Improvement Committee in encouraging and coordinating forest genetics activities in this region. We are happy, therefore, to publish this Proceedings of the Fourth Lake States Forest Tree Improvement Conference, as we did for the preceding three conferences in 1953,...

Proceedings of the fifth Lake States forest tree improvement conference

Treesearch

Lake States Forest Experiment Station

1962-01-01

The Lake States Forest Experiment Station has given active support to the Lake States Forest Tree Improvement Committee since the Committee's inception in 1953. In the interests of encouraging and coordinating forest genetics activities in this region, we are happy to publish this Proceedings of the Fifth Lake States Forest Tree Improvement Conference, as we did...

Proceedings of the 12th Lake States Forest Tree Improvement Conference, August 1975.

Treesearch

USDA FS

1976-01-01

Presents 20 papers concerning recent research in forest genetics, physiology, and allied fields. Species discussed include cottonwood, white spruce, jack pine, white pine, aspen, and others. Emphasizes the role of tree improvement in increasing wood-fiber production. Includes abstracts from papers presented at the 15th Canadian Tree Improvement Association Meeting...

Tree improvement opportunities in the North-Central States related to economic trends, a problem analysis.

Treesearch

David H. Dawson; John A. Pitcher

1970-01-01

Economic trends are interpreted and related to planning applied forest tree-improvement programs for the North-Central Region. Projected demands for forest products are considered in light of the forest resource and alternatives for its use. Suggestions are given for tree-improvement programs for seven conifer and three hardwood species.

Soil Management in Hardwood Plantations

Treesearch

B. G. Blackmon

1978-01-01

Several soil management techniques--fertilization, deep plowing, cover cropping, summer fallowing, Irrigation, and cultivation--can benefit hardwood plantations. The applicability of the treatments to plantations of cottonwood, sweetgum, sycamore, green ash, yellow-poplar, and oaks depends largely on site conditions.

Variation in microbial activity in histosols and its relationship to soil moisture.

PubMed

Tate, R L; Terry, R E

1980-08-01

Microbial biomass, dehydrogenase activity, carbon metabolism, and aerobic bacterial populations were examined in cropped and fallow Pahokee muck (a lithic medisaprist) of the Florida Everglades. Dehydrogenase activity was two- to sevenfold greater in soil cropped to St. Augustinegrass (Stenotaphrum secundatum (Walt) Kuntz) compared with uncropped soil, whereas biomass ranged from equivalence in the two soils to a threefold stimulation in the cropped soil. Biomass in soil cropped to sugarcane (Saccharum spp. L) approximated that from the grass field, whereas dehydrogenase activities of the cane soil were nearly equivalent to those of the fallow soil. Microbial biomass, dehydrogenase activity, aerobic bacterial populations, and salicylate oxidation rates all correlated with soil moisture levels. These data indicate that within the moisture ranges detected in the surface soils, increased moisture stimulated microbial activity, whereas within the soil profile where moisture ranges reached saturation, increased moisture inhibited aerobic activities and stimulated anaerobic processes.

Variation in Microbial Activity in Histosols and Its Relationship to Soil Moisture †

PubMed Central

Tate, Robert L.; Terry, Richard E.

1980-01-01

Microbial biomass, dehydrogenase activity, carbon metabolism, and aerobic bacterial populations were examined in cropped and fallow Pahokee muck (a lithic medisaprist) of the Florida Everglades. Dehydrogenase activity was two- to sevenfold greater in soil cropped to St. Augustinegrass (Stenotaphrum secundatum (Walt) Kuntz) compared with uncropped soil, whereas biomass ranged from equivalence in the two soils to a threefold stimulation in the cropped soil. Biomass in soil cropped to sugarcane (Saccharum spp. L) approximated that from the grass field, whereas dehydrogenase activities of the cane soil were nearly equivalent to those of the fallow soil. Microbial biomass, dehydrogenase activity, aerobic bacterial populations, and salicylate oxidation rates all correlated with soil moisture levels. These data indicate that within the moisture ranges detected in the surface soils, increased moisture stimulated microbial activity, whereas within the soil profile where moisture ranges reached saturation, increased moisture inhibited aerobic activities and stimulated anaerobic processes. PMID:16345610

[Community structure and seasonal change of soil micro-arthropodes in the Lower Reaches of Liaohe River Plain under different land utilization].

PubMed

Ke, Xin; Liang, Wenju; Yu, Wantai; Xie, Rongdong; Weng, Chaolian; Yang, Yiming; Yin, Wenying

2004-04-01

The data on the soil micro-arthropodes under four land utilization types (fallow, forest, upland field and paddy) in the Lower Reaches of Liaohe River Plain were collected in a period from October 2000 to October 2001. Using the community parameters of population density, group richness, diversity index and evenness, the community structure and its seasonal changes were described. There were 12 groups of soil micro-arthropodes in this region, and of the groups, Collembola and Acarina were dominant, and Diptera, Coleoptera and Hymenoptera were often seen in fallow, forest and upland field, while Collembola, Acarina and Diptera were dominant in paddy. Both land utilization and seasonal change influenced the population density, group richness and diversity index of soil micro-arthropodes. The vertical distribution in both density and group number of arthropods in soil was in the order of surface > middle > bottom.

Health Shocks and Natural Resource Management: Evidence from Western Kenya.

PubMed

Damon, Maria; Zivin, Joshua Graff; Thirumurthy, Harsha

2015-01-01

Poverty and altered planning horizons brought on by the HIV/AIDS epidemic can change individual discount rates, altering incentives to conserve natural resources. Using longitudinal household survey data from western Kenya, we estimate the effects of health status on investments in soil quality, as indicated by households' agricultural land fallowing decisions. We first show that this effect is theoretically ambiguous: while health improvements lower discount rates and thus increase incentives to conserve natural resources, they also increase labor productivity and make it more likely that households can engage in labor-intensive resource extraction activities. We find that household size and composition are predictors of whether the effect of health improvements on discount rates dominates the productivity effect, or vice-versa. Since households with more and younger members are better able to reallocate labor to cope with productivity shocks, the discount rate effect dominates for these households and health improvements lead to greater levels of conservation. In smaller families with less substitutable labor, the productivity effect dominates and health improvements lead to greater environmental degradation.

Improving medical diagnosis reliability using Boosted C5.0 decision tree empowered by Particle Swarm Optimization.

PubMed

Pashaei, Elnaz; Ozen, Mustafa; Aydin, Nizamettin

2015-08-01

Improving accuracy of supervised classification algorithms in biomedical applications is one of active area of research. In this study, we improve the performance of Particle Swarm Optimization (PSO) combined with C4.5 decision tree (PSO+C4.5) classifier by applying Boosted C5.0 decision tree as the fitness function. To evaluate the effectiveness of our proposed method, it is implemented on 1 microarray dataset and 5 different medical data sets obtained from UCI machine learning databases. Moreover, the results of PSO + Boosted C5.0 implementation are compared to eight well-known benchmark classification methods (PSO+C4.5, support vector machine under the kernel of Radial Basis Function, Classification And Regression Tree (CART), C4.5 decision tree, C5.0 decision tree, Boosted C5.0 decision tree, Naive Bayes and Weighted K-Nearest neighbor). Repeated five-fold cross-validation method was used to justify the performance of classifiers. Experimental results show that our proposed method not only improve the performance of PSO+C4.5 but also obtains higher classification accuracy compared to the other classification methods.

West Coast tree improvement programs: a break-even, cost-benefit analysis

Treesearch

F. Thomas Ledig; Richard L Porterfield

1981-01-01

Three tree improvement programs were analyzed by break-even, cost-benefit technique: one for ponderosa pine in the Pacific Northwest, and two for Douglas-fir in the Pacific Northwest-one of low intensity and the other of high intensity. A return of 8 percent on investment appears feasible by using short rotations or by accompanying tree improvement with thinning....

Proceedings of the sixth Lake States forest tree improvement conference

Treesearch

Paul O. Rudolf

1964-01-01

In April of 1953 the Lake States Forest Tree Improvement Committee was formed, following a regional conference sponsored by the Lake States Forest Experiment Station. Since that time there has been a marked increase in the amount of tree improvement work done in this region, and the Committee has performed a valuable service in encouraging and coordinating such...

A bibliography on forest genetics and forest tree improvement 1955

Treesearch

Jonathan W. Wright

1957-01-01

Station Paper No. 77, issued in 1955, was a bibliography of articles on forest genetics and forest tree improvement that were published in 1954. It was prepared at the request of the Committee of Forest Tree Improvement, Society of American Foresters. This second annual bibliography includes articles published in 1955 and a few articles published in 1954 that were not...

The Hardwood Tree Improvement and Regeneration Center: its strategic plans for sustaining the hardwood resource

Treesearch

Charles H. Michler; Michael J. Bosela; Paula M. Pijut; Keith E. Woeste

2003-01-01

A regional center for hardwood tree improvement, genomics, and regeneration research, development and technology transfer will focus on black walnut, black cherry, northern red oak and, in the future, on other fine hardwoods as the effort is expanded. The Hardwood Tree Improvement and Regeneration Center (HTIRC) will use molecular genetics and genomics along with...

Reducing Eurasian wild boar (Sus scrofa) population density as a measure for bovine tuberculosis control: effects in wild boar and a sympatric fallow deer (Dama dama) population in Central Spain.

PubMed

García-Jiménez, W L; Fernández-Llario, P; Benítez-Medina, J M; Cerrato, R; Cuesta, J; García-Sánchez, A; Gonçalves, P; Martínez, R; Risco, D; Salguero, F J; Serrano, E; Gómez, L; Hermoso-de-Mendoza, J

2013-07-01

Research on management of bovine tuberculosis (bTB) in wildlife reservoir hosts is crucial for the implementation of effective disease control measures and the generation of practical bTB management recommendations. Among the management methods carried out on wild species to reduce bTB prevalence, the control of population density has been frequently used, with hunting pressure a practical strategy to reduce bTB prevalence. However, despite the number of articles about population density control in different bTB wildlife reservoirs, there is little information regarding the application of such measures on the Eurasian wild boar (Sus scrofa), which is considered the main bTB wildlife reservoir within Mediterranean ecosystems. This study shows the effects of a management measure leading to a radical decrease in wild boar population density at a large hunting estate in Central Spain, in order to assess the evolution of bTB prevalence in both the wild boar population and the sympatric fallow deer population. The evolution of bTB prevalence was monitored in populations of the two wild ungulate species over a 5-year study period (2007-2012). The results showed that bTB prevalence decreased in fallow deer, corresponding to an important reduction in the wild boar population. However, this decrease was not homogeneous: in the last season of study there was an increase in bTB-infected male animals. Moreover, bTB prevalence remained high in the remnant wild boar population. Copyright © 2013 Elsevier B.V. All rights reserved.

Beneficial Insect Borders Provide Northern Bobwhite Brood Habitat

PubMed Central

Moorman, Christopher E.; Plush, Charles J.; Orr, David B.; Reberg-Horton, Chris

2013-01-01

Strips of fallow vegetation along cropland borders are an effective strategy for providing brood habitat for declining populations of upland game birds (Order: Galliformes), including northern bobwhite (Colinus virginianus), but fallow borders lack nectar-producing vegetation needed to sustain many beneficial insect populations (e.g., crop pest predators, parasitoids, and pollinator species). Planted borders that contain mixes of prairie flowers and grasses are designed to harbor more diverse arthropod communities, but the relative value of these borders as brood habitat is unknown. We used groups of six human-imprinted northern bobwhite chicks as a bioassay for comparing four different border treatments (planted native grass and prairie flowers, planted prairie flowers only, fallow vegetation, or mowed vegetation) as northern bobwhite brood habitat from June-August 2009 and 2010. All field border treatments were established around nine organic crop fields. Groups of chicks were led through borders for 30-min foraging trials and immediately euthanized, and eaten arthropods in crops and gizzards were measured to calculate a foraging rate for each border treatment. We estimated arthropod prey availability within each border treatment using a modified blower-vac to sample arthropods at the vegetation strata where chicks foraged. Foraging rate did not differ among border treatments in 2009 or 2010. Total arthropod prey densities calculated from blower-vac samples did not differ among border treatments in 2009 or 2010. Our results showed plant communities established to attract beneficial insects should maximize the biodiversity potential of field border establishment by providing habitat for beneficial insects and young upland game birds. PMID:24376759

Phthalate esters contamination in soil and plants on agricultural land near an electronic waste recycling site.

PubMed

Ma, Ting Ting; Christie, Peter; Luo, Yong Ming; Teng, Ying

2013-08-01

The accumulation of phthalic acid esters (PAEs) in soil and plants in agricultural land near an electronic waste recycling site in east China has become a great threat to the neighboring environmental quality and human health. Soil and plant samples collected from land under different utilization, including fallow plots, vegetable plots, plots with alfalfa (Medicago sativa L.) as green manure, fallow plots under long-term flooding and fallow plots under alternating wet and dry periods, together with plant samples from relative plots were analyzed for six PAE compounds nominated as prior pollutants by USEPA. In the determined samples, the concentrations of six target PAE pollutants ranged from 0.31-2.39 mg/kg in soil to 1.81-5.77 mg/kg in various plants (dry weight/DW), and their bioconcentration factors (BCFs) ranged from 5.8 to 17.9. Health risk assessments were conducted on target PAEs, known as typical environmental estrogen analogs, based on their accumulation in the edible parts of vegetables. Preliminary risk assessment to human health from soil and daily vegetable intake indicated that DEHP may present a high-exposure risk on all ages of the population in the area by soil ingestion or vegetable consumption. The potential damage that the target PAE compounds may pose to human health should be taken into account in further comprehensive risk assessments in e-waste recycling sites areas. Moreover, alfalfa removed substantial amounts of PAEs from the soil, and its use can be considered a good strategy for in situ remediation of PAEs.

Theme: Land Laboratories--Urban Settings, Liability, Natural Resources Labs.

ERIC Educational Resources Information Center

Whaley, David, Ed.; And Others

1994-01-01

Includes "With a Little Imagination"; "From Fallow to Fertile"; "Operating a School Enterprise in Agriculture"; "Using a Nontraditional Greenhouse to Enhance Lab Instruction"; "Risk Management for Liability in Operating Land Laboratories"; "Working Land and Water Laboratory for Natural…

Towards an understanding of coupled physical and biological processes in the cultivated Sahel - 2. Vegetation and carbon dynamics

NASA Astrophysics Data System (ADS)

Boulain, N.; Cappelaere, B.; Ramier, D.; Issoufou, H. B. A.; Halilou, O.; Seghieri, J.; Guillemin, F.; Oï, M.; Gignoux, J.; Timouk, F.

2009-08-01

SummaryThis paper analyses the dynamics of vegetation and carbon during the West African monsoon season, for millet crop and fallow vegetation covers in the cultivated area of the Sahel. Comparing these two dominant land cover types informs on the impact of cultivation on productivity and carbon fluxes. Biomass, leaf area index (LAI) and carbon fluxes were monitored over a 2-year period for these two vegetation systems in the Wankama catchment of the AMMA (African monsoon multidisciplinary analyses) experimental super-site in West Niger. Carbon fluxes and water use efficiency observed at the field scale are confronted with ecophysiological measurements (photosynthetic response to light, and relation of water use efficiency to air humidity) made at the leaf scale for the dominant plant species in the two vegetation systems. The two rainy seasons monitored were dissimilar with respect to rain patterns, reflecting some of the interannual variability. Distinct responses in vegetation development and in carbon dynamics were observed between the two vegetation systems. Vegetation development in the fallow was found to depend more on rainfall distribution along the season than on its starting date. A quite opposite behaviour was observed for the crop vegetation: the date of first rain appears as a principal factor of millet growth. Carbon flux exchanges were well correlated to vegetation development. High responses of photosynthesis to light were observed for the dominant herbaceous and shrub species of the fallow at the leaf and field scales. Millet showed high response at the leaf scale, but a much lesser response at the field scale. This pattern, also observed for water use efficiency, is to be related to the low density of the millet cover. A simple LAI-based model for scaling up the photosynthetic response from leaf to field scale was found quite successful for the fallow, but was less conclusive for the crop, due to spatial variability of LAI. Time/space variations in leaf distribution for the dominant species are key to scale transition of carbon dynamics. Results obtained for the two vegetation covers are important in light of the major land use/cover change experienced in the Sahel region due to extensive savanna clearing for food production.

Confronting a Process-based Model of Temperate Tree Transpiration with Data from Forests in Central Panama Exposed to Drought

NASA Astrophysics Data System (ADS)

Ewers, B. E.; Bretfeld, M.; Millar, D.; Hall, J. S.; Beverly, D.; Hall, J. S.; Ogden, F. L.; Mackay, D. S.

2016-12-01

Process-based models of tree impacts on the hydrologic cycle must include not only plant hydraulic limitations but also photosynthetic controls because plants lose water to gain carbon. The Terrestrial Regional Ecosystem Exchange Simulator (TREES) is one such model. TREES includes a Bayesian model-data fusion approach that provides rigorous tests of patterns in tree transpiration data against biophysical processes in the model. TREES has been extensively tested against many temperate tree data sets including those experiencing severe and lethal drought. We test TREES against data from sap flow-scaled transpiration in 76 tropical trees (representing 42 different species) in secondary forests of three different ages (8, 25, and 80+ years) located in the Panama Canal Watershed. These data were collected during the third driest El Niño-Southern Oscillation (ENSO) event on record in Panama during 2015/2016. Tree transpiration response to vapor pressure deficit and solar radiation was the same in the two older forests, but showed an additional response to limited soil moisture in the youngest forest. Volumetric water content at 30 and 50 cm depths was 8% lower in the 8 year old forest than in the 80+ year old forest. TREES could not simulate this difference in soil moisture without increasing simulated root area. TREES simulations were improved by including light response curves of leaf photosynthesis, root vulnerability to cavitation and canopy position impacts on light. TREES was able to simulate the anisohydric (loose stomatal regulation of leaf water potential) and isohydric (tight stomatal regulation) of the 73 trees species a priori indicating that species level information is not required. Analyses of posterior probability distributions indicates TREES model predictions of individual tree transpiration would likely be improved with more detailed root and soil moisture in all forest ages data with the most improvement likely in the 8 year old forest. Our results suggest that a biophysical tree transpiration model developed in temperate forests can be applied to the tropics and could be used to improve predictions of evapotranspiration from changing land cover in tropical hydrology models.

Tree biomass in the Swiss landscape: nationwide modelling for improved accounting for forest and non-forest trees.

PubMed

Price, B; Gomez, A; Mathys, L; Gardi, O; Schellenberger, A; Ginzler, C; Thürig, E

2017-03-01

Trees outside forest (TOF) can perform a variety of social, economic and ecological functions including carbon sequestration. However, detailed quantification of tree biomass is usually limited to forest areas. Taking advantage of structural information available from stereo aerial imagery and airborne laser scanning (ALS), this research models tree biomass using national forest inventory data and linear least-square regression and applies the model both inside and outside of forest to create a nationwide model for tree biomass (above ground and below ground). Validation of the tree biomass model against TOF data within settlement areas shows relatively low model performance (R 2 of 0.44) but still a considerable improvement on current biomass estimates used for greenhouse gas inventory and carbon accounting. We demonstrate an efficient and easily implementable approach to modelling tree biomass across a large heterogeneous nationwide area. The model offers significant opportunity for improved estimates on land use combination categories (CC) where tree biomass has either not been included or only roughly estimated until now. The ALS biomass model also offers the advantage of providing greater spatial resolution and greater within CC spatial variability compared to the current nationwide estimates.

Equipment modifications for perennial nutsedge control in fallow organic transition

USDA-ARS?s Scientific Manuscript database

Perennial nutsedges are extremely difficult to control in organic crop transition and production systems. Herbicides suitable for use in certified organic production do not adequately control perennial nutsedges. Cultural and mechanical control are partially effective in controlling perennial nuts...

Use of DNA markers in forest tree improvement research

Treesearch

D.B. Neale; M.E. Devey; K.D. Jermstad; M.R. Ahuja; M.C. Alosi; K.A. Marshall

1992-01-01

DNA markers are rapidly being developed for forest trees. The most important markers are restriction fragment length polymorphisms (RFLPs), polymerase chain reaction- (PCR) based markers such as random amplified polymorphic DNA (RAPD), and fingerprinting markers. DNA markers can supplement isozyme markers for monitoring tree improvement activities such as; estimating...

Tree improvement research in oak species

Treesearch

Franklin C. Cech

1971-01-01

Early efforts at developing new forms of oak by interspecific hybridization have not been very successful, although spontaneous hybrids appear rather readily in nature. Preliminary reports on a few seed-source or provenance studies indicate that differences among sources are generally less than differences among trees within sources. This directs tree-improvement...

Evaluation of soil quality indicators in paddy soils under different crop rotation systems

NASA Astrophysics Data System (ADS)

Nadimi-Goki, Mandana; Bini, Claudio; Haefele, Stephan; Abooei, Monireh

2013-04-01

Evaluation of soil quality indicators in paddy soils under different crop rotation systems Soil quality, by definition, reflects the capacity to sustain plant and animal productivity, maintain or enhance water and air quality, and promote plant and animal health. Soil quality assessment is an essential issue in soil management for agriculture and natural resource protection. This study was conducted to detect the effects of four crop rotation systems (rice-rice-rice, soya-rice-rice, fallow-rice and pea-soya-rice) on soil quality indicators (soil moisture, porosity, bulk density, water-filled pore space, pH, extractable P, CEC, OC, OM, microbial respiration, active carbon) in paddy soils of Verona area, Northern Italy. Four adjacent plots which managed almost similarly, over five years were selected. Surface soil samples were collected from each four rotation systems in four times, during growing season. Each soil sample was a composite of sub-samples taken from 3 points within 350 m2 of agricultural land. A total of 48 samples were air-dried and passed through 2mm sieve, for some chemical, biological, and physical measurements. Statistical analysis was done using SPSS. Statistical results revealed that frequency distribution of most data was normal. The lowest CV% was related to pH. Analysis of variance (ANOVA) and comparison test showed that there are significant differences in soil quality indicators among crop rotation systems and sampling times. Results of multivariable regression analysis revealed that soil respiration had positively correlation coefficient with soil organic matter, soil moisture and cation exchange capacity. Overall results indicated that the rice rotation with legumes such as bean and soybean improved soil quality over a long time in comparison to rice-fallow rotation, and this is reflected in rice yield. Keywords: Soil quality, Crop Rotation System, Paddy Soils, Italy

Sustainable crop intensification through surface water irrigation in Bangladesh? A geospatial assessment of landscape-scale production potential.

PubMed

Krupnik, Timothy J; Schulthess, Urs; Ahmed, Zia Uddin; McDonald, Andrew J

2017-01-01

Changing dietary preferences and population growth in South Asia have resulted in increasing demand for wheat and maize, along side high and sustained demand for rice. In the highly productive northwestern Indo-Gangetic Plains of South Asia, farmers utilize groundwater irrigation to assure that at least two of these crops are sequenced on the same field within the same year. Such double cropping has had a significant and positive influence on regional agricultural productivity. But in the risk-prone and food insecure lower Eastern Indo-Gangetic Plains (EIGP), cropping is less intensive. During the dryer winter months, arable land is frequently fallowed or devoted to lower yielding rainfed legumes. Seeing opportunity to boost cereals production, particularly for rice, donors and land use policy makers have consequently reprioritized agricultural development investments in this impoverished region. Tapping groundwater for irrigation and intensified double cropping, however, is unlikely to be economically viable or environmentally sound in the EIGP. Constraints include saline shallow water tables and the prohibitively high installation and energetic extraction costs from deeper freshwater aquifers. The network of largely underutilized rivers and natural canals in the EIGP could conversely be tapped to provide less energetically and economically costly surface water irrigation (SWI). This approach is now championed by the Government of Bangladesh, which has requested USD 500 million from donors to implement land and water use policies to facilitate SWI and double cropping. Precise geospatial assessment of where freshwater flows are most prominent, or where viable fallow or low production intensity cropland is most common, however remains lacking. In response, we used remotely sensed data to identify agricultural land, detect the temporal availability of freshwater in rivers and canals, and assess crop production intensity over a three-year study period in a 33,750 km 2 case study area in southwestern Bangladesh. We combined these data with georeferenced and temporally explicitly soil and water salinity information, in addition to relative elevation classifications, in order to examine the extent of winter fallows and low productivity rainfed cropland that could be irrigated by small-scale surface water pumps. Applying observations of irrigated crop sowing dates and yields from 510 wheat, 550 maize, and 553 rice farmers, we also modeled crop intensification production scenarios within the case study area. We conservatively estimate that at least 20,800 and 103,000 ha of fallow and rainfed cropland, respectively, could be brought into intensified double cropping using SWI. Scenario analysis indicates that if 25%-75% of the fallow or low-intensity land were converted to irrigated maize, national aggregate production could increase by 10-14% or 29-42%, respectively. Conversion to wheat would conversely boost national production by 9-10% or 26-31%. Irrigated rice is however unlikely to contribute >3%. In aggregate, these actions could generate between USD 36-108 million of revenue annually among farmers. Intensification therefore has important land use policy and food and income security implications, helping to rationalizei SWI investments. Crop choice, water resource allocation, and water governance will however remain crucial considerations for irrigation planners.

Forest gene conservation programs in Alberta, Canada

Treesearch

Jodie Krakowski

2017-01-01

Provincial tree improvement programs in Alberta began in 1976. Early gene conservation focused on ex situ measures such as seed and clone banking, and research trials of commercial species with tree improvement programs. The gene conservation program now encompasses representative and unique populations of all native tree species in situ. The ex situ program aims to...

Systems approach critical to agroecosystems management

USDA-ARS?s Scientific Manuscript database

Sustainable dryland agriculture in the semi-arid Great Plains of the U.S. depends on achieving economic yields while maintaining soil resources. The traditional system of conventional tillage wheat-fallow was vulnerable to excessive soil erosion which resulted in excessive organic matter loss. No-...

7 CFR 1469.3 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... grasses and legumes; summer fallow; typically cropped wet areas, such as rice fields, rotated to wildlife... machine harvested. The crop may be grasses, legumes, or a combination of both. Incidental forest land... mixture, or a grass-legume mixture. Management usually consists of cultural treatments: fertilization...

Methylmercury dynamics in Upper Sacramento Valley rice fields with low background soil mercury levels

USGS Publications Warehouse

Tanner, K. Christy; Windham-Myers, Lisamarie; Marvin-DiPasquale, Mark C.; Fleck, Jacob; Tate, Kenneth W.; Linquist, Bruce A.

2018-01-01

Few studies have considered how methylmercury (MeHg, a toxic form of Hg produced in anaerobic soils) production in rice (Oryza sativa L.) fields can affect water quality, and little is known about MeHg dynamics in rice fields. Surface water MeHg and total Hg (THg) imports, exports, and storage were studied in two commercial rice fields in the Sacramento Valley, California, where soil THg was low (25 and 57 ng g−1). The median concentration of MeHg in drainage water exiting the fields was 0.17 ng g−1 (range: <0.007–2.1 ng g−1). Compared with irrigation water, drainage water had similar MeHg concentrations, and lower THg concentrations during the growing season. Significantly elevated drainage water MeHg and THg concentrations were observed in the fallow season compared with the growing season. An analysis of surface water loads indicates that fields were net importers of both MeHg (76–110 ng m−2) and THg (1947–7224 ng m−2) during the growing season, and net exporters of MeHg (35–200 ng m−2) and THg (248–6496 ng m−2) during the fallow season. At harvest, 190 to 700 ng MeHg m−2 and 1400 to 1700 ng THg m−2 were removed from fields in rice grain. Rice straw, which contained 120 to 180 ng MeHg m−2 and 7000–10,500 ng m−2 THg was incorporated into the soil. These results indicate that efforts to reduce MeHg and THg exports in rice drainage water should focus on the fallow season. Substantial amounts of MeHg and THg were stored in plants, and these pools should be considered in future studies.

Long-Term Effect of Crop Rotation and Fertilisation on Bioavailability and Fractionation of Copper in Soil on the Loess Plateau in Northwest China

PubMed Central

Zang, Yifei; Wei, Xiaorong; Hao, Mingde

2015-01-01

The bioavailability and fractionation of Cu reflect its deliverability in soil. Little research has investigated Cu supply to crops in soil under long-term rotation and fertilisation on the Loess Plateau. A field experiment was conducted in randomized complete block design to determine the bioavailability and distribution of Cu fractions in a Heilu soil (Calcaric Regosol) after 18 years of rotation and fertilisation. The experiment started in 1984, including five cropping systems (fallow control, alfalfa cropping, maize cropping, winter wheat cropping, and grain-legume rotation of pea/winter wheat/winter wheat + millet) and five fertiliser treatments (unfertilised control, N, P, N + P, and N + P + manure). Soil samples were collected in 2002 for chemical analysis. Available Cu was assessed by diethylene triamine pentaacetic acid (DTPA) extraction, and Cu was fractionated by sequential extraction. Results showed that DTPA-Cu was lower in cropping systems compared with fallow control. Application of fertilisers resulted in no remarkable changes in DTPA-Cu compared with unfertilised control. Correlation and path analyses revealed that soil pH and CaCO3 directly affected Cu bioavailability, whereas available P indirectly affected Cu bioavailability. The concentrations of Cu fractions (carbonate and Fe/Al oxides) in the plough layer were lower in cropping systems, while the values in the plough sole were higher under grain-legume rotation relative to fallow control. Manure with NP fertiliser increased Cu fractions bound to organic matter and minerals in the plough layer, and its effects in the plough sole varied with cropping systems. The direct sources (organic-matter-bound fraction and carbonate-bound fraction) of available Cu contributed much to Cu bioavailability. The mineral-bound fraction of Cu acted as an indicator of Cu supply potential in the soil. PMID:26694965

Raindrop Impact, Disaggregation & CO2 emissions

NASA Astrophysics Data System (ADS)

Gao, Xin; Wang, Rui; Hu, Yaxian; Guo, Shengli

2017-04-01

On the Chinese Loess Plateau, heave storms often occur from July to September, which happens to be fallow season. Without protections from crop coverage, soil surface is completely exposed to rainfalls, receives much more enhanced raindrop impact, thus potentially experience advanced disaggregation. After breaking into smaller fragments, and exposing those previously encapsulated soil organic carbon (SOC), soil surface is very likely to release additional CO2 emissions. However, the possible addition of CO2 emissions from fallow season on the Chinese Loess Plateau, and its potential contribution to local carbon balances, have not yet been systematically investigated. In order to compare the effects of raindrop impacts to CO2 emissions on bare soil during fallow season, two erosion plots (100 cm * 40 cm *35 cm) were set up. Both plots were filled with the loess soil. One plot was covered with two meshes (1 mm * 1mm)overlapping each other, to simulate crop coverage; the other plot was directly exposed to raindrops. Both plots were placed underneath simulated rainfalls (intensity of 90 mm h-1), for 5 min and 10 min. After 24 hours post rainfalls, soil moisture and CO2 emissions from both plots were measured every day for one week. Soil particle size distributions from surface soil were also determined to compare the changes of soil composition. Our results show that raindrop impacted soil in general released more CO2 emissions than the covered soil, and this pattern was more pronounced after experiencing longer period of rainfall events (20.6% more after 5 min; 48.3% more after 10 min). This agreed well with the increase of soil particles < 0.01 mm observed on the raindrop impacted soil surface.

Long-Term Effect of Crop Rotation and Fertilisation on Bioavailability and Fractionation of Copper in Soil on the Loess Plateau in Northwest China.

PubMed

Zang, Yifei; Wei, Xiaorong; Hao, Mingde

2015-01-01

The bioavailability and fractionation of Cu reflect its deliverability in soil. Little research has investigated Cu supply to crops in soil under long-term rotation and fertilisation on the Loess Plateau. A field experiment was conducted in randomized complete block design to determine the bioavailability and distribution of Cu fractions in a Heilu soil (Calcaric Regosol) after 18 years of rotation and fertilisation. The experiment started in 1984, including five cropping systems (fallow control, alfalfa cropping, maize cropping, winter wheat cropping, and grain-legume rotation of pea/winter wheat/winter wheat + millet) and five fertiliser treatments (unfertilised control, N, P, N + P, and N + P + manure). Soil samples were collected in 2002 for chemical analysis. Available Cu was assessed by diethylene triamine pentaacetic acid (DTPA) extraction, and Cu was fractionated by sequential extraction. Results showed that DTPA-Cu was lower in cropping systems compared with fallow control. Application of fertilisers resulted in no remarkable changes in DTPA-Cu compared with unfertilised control. Correlation and path analyses revealed that soil pH and CaCO3 directly affected Cu bioavailability, whereas available P indirectly affected Cu bioavailability. The concentrations of Cu fractions (carbonate and Fe/Al oxides) in the plough layer were lower in cropping systems, while the values in the plough sole were higher under grain-legume rotation relative to fallow control. Manure with NP fertiliser increased Cu fractions bound to organic matter and minerals in the plough layer, and its effects in the plough sole varied with cropping systems. The direct sources (organic-matter-bound fraction and carbonate-bound fraction) of available Cu contributed much to Cu bioavailability. The mineral-bound fraction of Cu acted as an indicator of Cu supply potential in the soil.

Balancing shifting cultivation and forest conservation: lessons from a "sustainable landscape" in southeastern Mexico.

PubMed

Dalle, Sarah Paule; Pulido, María T; de Blois, Sylvie

2011-07-01

Shifting cultivation is often perceived to be a threat to forests, but it is also central to the culture and livelihoods of millions of people worldwide. Balancing agriculture and forest conservation requires knowledge of how agricultural land uses evolve in landscapes with forest conservation initiatives. Based on a case study from Quintana Roo, Mexico, and remote sensing data, we investigated land use and land cover change (LUCC) in relation to accessibility (from main settlement and road) in search of evidence for agricultural expansion and/or intensification after the initiation of a community forestry program in 1986. Intensification was through a shortening of the fallow period. Defining the sampling space as a function of human needs and accessibility to agricultural resources was critical to ensure a user-centered perspective of the landscape. The composition of the accessible landscape changed substantially between 1976 and 1997. Over the 21-year period studied, the local population saw the accessible landscape transformed from a heterogeneous array of different successional stages including mature forests to a landscape dominated by young fallows. We detected a dynamic characterized by intensification of shifting cultivation in the most accessible areas with milpas being felled more and more from young fallows in spite of a preference for felling secondary forests. We argue that the resulting landscape provides a poorer resource base for sustaining agricultural livelihoods and discuss ways in which agricultural change could be better addressed through participatory land use planning. Balancing agricultural production and forest conservation will become even more important in a context of intense negotiations for carbon credits, an emerging market that is likely to drive future land changes worldwide.

Improved FTA methodology and application to subsea pipeline reliability design.

PubMed

Lin, Jing; Yuan, Yongbo; Zhang, Mingyuan

2014-01-01

An innovative logic tree, Failure Expansion Tree (FET), is proposed in this paper, which improves on traditional Fault Tree Analysis (FTA). It describes a different thinking approach for risk factor identification and reliability risk assessment. By providing a more comprehensive and objective methodology, the rather subjective nature of FTA node discovery is significantly reduced and the resulting mathematical calculations for quantitative analysis are greatly simplified. Applied to the Useful Life phase of a subsea pipeline engineering project, the approach provides a more structured analysis by constructing a tree following the laws of physics and geometry. Resulting improvements are summarized in comparison table form.

Improved FTA Methodology and Application to Subsea Pipeline Reliability Design

PubMed Central

Lin, Jing; Yuan, Yongbo; Zhang, Mingyuan

2014-01-01

An innovative logic tree, Failure Expansion Tree (FET), is proposed in this paper, which improves on traditional Fault Tree Analysis (FTA). It describes a different thinking approach for risk factor identification and reliability risk assessment. By providing a more comprehensive and objective methodology, the rather subjective nature of FTA node discovery is significantly reduced and the resulting mathematical calculations for quantitative analysis are greatly simplified. Applied to the Useful Life phase of a subsea pipeline engineering project, the approach provides a more structured analysis by constructing a tree following the laws of physics and geometry. Resulting improvements are summarized in comparison table form. PMID:24667681

How effective are tree improvement programs in the 50 states?

Treesearch

Christopher D. Risbrudt; Stephen E. McDonald

1986-01-01

All 50 states were surveyed to determine the extent of their activities in producing genetically improved trees for timber production. Describes the funds expended, the species being improved, and the use of State and Private Forestry funds provided for genetic improvement. Projects future timber volumes attributable to genetic improvement, and estimates benefit cost...

An improved classification tree analysis of high cost modules based upon an axiomatic definition of complexity

NASA Technical Reports Server (NTRS)

Tian, Jianhui; Porter, Adam; Zelkowitz, Marvin V.

1992-01-01

Identification of high cost modules has been viewed as one mechanism to improve overall system reliability, since such modules tend to produce more than their share of problems. A decision tree model was used to identify such modules. In this current paper, a previously developed axiomatic model of program complexity is merged with the previously developed decision tree process for an improvement in the ability to identify such modules. This improvement was tested using data from the NASA Software Engineering Laboratory.

Ring profiler: a new method for estimating tree-ring density for improved estimates of carbon storage

Treesearch

David W. Vahey; C. Tim Scott; J.Y. Zhu; Kenneth E. Skog

2012-01-01

Methods for estimating present and future carbon storage in trees and forests rely on measurements or estimates of tree volume or volume growth multiplied by specific gravity. Wood density can vary by tree ring and height in a tree. If data on density by tree ring could be obtained and linked to tree size and stand characteristics, it would be possible to more...

Initial Field Testing for Forest Tree Improvement

Treesearch

C. B. Briscoe

1963-01-01

Initial field testing for forest tree improvement is essentially a comparison of genetic groups whether the level of comparison is of species, provenances, or individual trees. A good study design should be as economical as possible, for a given precision, and must be accurate. The latter is simply obtained by restricting the study to a specified set of conditions,...

Tree genetic and improvement research at the University of Minnesota

Treesearch

Scott S. Pauley

1970-01-01

The School of Forestry's Tree Improvement Research Project was initiated in 1955. Studies in this area during the past fourteen years have been designed to accumulate information on genetic diversity in native and exotic tree species and isolate genetically superior lines for direct use in Minnesota forest plantings or for further selective breeding. Nursery...

Sectional Aluminum Poles Improve Length Measurements in Standing Trees

Treesearch

Joe P. McClure

1968-01-01

The use of sectional aluminum poles to measure lengths in standing trees can reduce bias and improve measurement precision. The method has been tested extensively under a variety of field conditions by Forest Survey crews in the Southeast. Over 16,000 trees with lengths up to 120 feet have been measured over the past 5 years.

Time of Flowering and Seed Ripening in Southern Pines

Treesearch

Keith W. Dorman; John C. Barber

1956-01-01

This publication was prepared under the sponsorship of the Committeeon Southern Forest Tree Improvement by the Subcommittee on Tree Selection and Breeding. It is the purpose of the Committee: to advise and assist those interested in the improvement of southern forest trees in arranging and conducting research and development programs; to provide a clearing house for...

The status of tree improvement programs for northern tree species

Treesearch

David S. Canavera

1977-01-01

Forest tree improvement research and application in the Northeast is reviewed in the perspective of past development and future needs. Control over provenance selection can provide the best quality seed for today's reforestation programs. Future supplies of seed must come from seed orchards if forest land owners are to attain the maximum production per unit area...

The central Appalachian hardwoods experience provides silvicultural tools for Ontario

Treesearch

Gary W. Miller; Ken A Elliott; Eric P. Boysen

1998-01-01

Cultural practices can be applied in even-age stands to reallocate site resources to selected crop trees. Precommercial thinning in sapling stands can increase diameter growth and improve species composition of trees in the main canopy. Commercial thinning in sawtimber stands also increases diameter growth of crop trees, improves residual stand quality, and removes...

Copper in the sediment and sea surface microlayer near a fallowed, open-net fish farm.

PubMed

Loucks, Ronald H; Smith, Ruth E; Fisher, Clyde V; Fisher, E Brian

2012-09-01

Sediment and sea surface microlayer samples near an open-net salmon farm in Nova Scotia, were analysed for copper. Copper is a constituent of the feed and is an active ingredient of anti-foulants. The salmon farm was placed in fallow after 15 years of production. Sampling was pursued over 27 months. Elevated copper concentrations in the sediments indicated the farm site as a source. Bubble flotation due to gas-emitting sediments from eutrophication is a likely process for accumulating copper in the sea surface microlayer at enriched concentrations. Elevated and enriched concentrations in the sea surface microlayer over distance from the farm site led, as a result of wind-drift, to an enlarged farm footprint. The levels of copper in both sediments and sea surface microlayer exceeded guidelines for protection of marine life. Over the 27 months period, copper levels persisted in the sediments and decreased gradually in the sea surface microlayer. Copyright © 2012 Elsevier Ltd. All rights reserved.

Urban tree mortality: a primer on demographic approaches

Treesearch

Lara A. Roman; John J. Battles; Joe R. McBride

2016-01-01

Realizing the benefits of tree planting programs depends on tree survival. Projections of urban forest ecosystem services and cost-benefit analyses are sensitive to assumptions about tree mortality rates. Long-term mortality data are needed to improve the accuracy of these models and optimize the public investment in tree planting. With more accurate population...

SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.

PubMed

Beccati, Alan; Gerken, Jan; Quast, Christian; Yilmaz, Pelin; Glöckner, Frank Oliver

2017-09-30

Phylogenetic trees are an important tool to study the evolutionary relationships among organisms. The huge amount of available taxa poses difficulties in their interactive visualization. This hampers the interaction with the users to provide feedback for the further improvement of the taxonomic framework. The SILVA Tree Viewer is a web application designed for visualizing large phylogenetic trees without requiring the download of any software tool or data files. The SILVA Tree Viewer is based on Web Geographic Information Systems (Web-GIS) technology with a PostgreSQL backend. It enables zoom and pan functionalities similar to Google Maps. The SILVA Tree Viewer enables access to two phylogenetic (guide) trees provided by the SILVA database: the SSU Ref NR99 inferred from high-quality, full-length small subunit sequences, clustered at 99% sequence identity and the LSU Ref inferred from high-quality, full-length large subunit sequences. The Tree Viewer provides tree navigation, search and browse tools as well as an interactive feedback system to collect any kinds of requests ranging from taxonomy to data curation and improving the tool itself.

Improving generalized inverted index lock wait times

NASA Astrophysics Data System (ADS)

Borodin, A.; Mirvoda, S.; Porshnev, S.; Ponomareva, O.

2018-01-01

Concurrent operations on tree like data structures is a cornerstone of any database system. Concurrent operations intended for improving read\\write performance and usually implemented via some way of locking. Deadlock-free methods of concurrency control are known as tree locking protocols. These protocols provide basic operations(verbs) and algorithm (ways of operation invocations) for applying it to any tree-like data structure. These algorithms operate on data, managed by storage engine which are very different among RDBMS implementations. In this paper, we discuss tree locking protocol implementation for General inverted index (Gin) applied to multiversion concurrency control (MVCC) storage engine inside PostgreSQL RDBMS. After that we introduce improvements to locking protocol and provide usage statistics about evaluation of our improvement in very high load environment in one of the world’s largest IT company.

Improved prediction of hardwood tree biomass derived from wood density estimates and form factors for whole trees

Treesearch

David W. MacFarlane; Neil R. Ver Planck

2012-01-01

Data from hardwood trees in Michigan were analyzed to investigate how differences in whole-tree form and wood density between trees of different stem diameter relate to residual error in standard-type biomass equations. The results suggested that whole-tree wood density, measured at breast height, explained a significant proportion of residual error in standard-type...

Effect of crown growing space and age on the growth of northern red oak

Treesearch

Gary W. Miller

1997-01-01

Cultural practices can be applied in even-age stands to reallocate site resources to selected crop trees. Precornrnercial thinning in sapling stands can increase diameter growth and improve species composition of trees in the main canopy. Commercial thinning in sawtimber stands also increases diameter growth of crop trees, improves residual stand quality, and removes...

Genomics of Tropical Fruit Tree Crops

USDA-ARS?s Scientific Manuscript database

The genetic improvement of tropical fruit trees is limited when compared to progress achieved in temperate fruit trees and annual crops. Tropical fruit tree breeding programs require significant resources to develop new cultivars that are adapted to modern shipping and storage requirements. The use...

Soft context clustering for F0 modeling in HMM-based speech synthesis

NASA Astrophysics Data System (ADS)

Khorram, Soheil; Sameti, Hossein; King, Simon

2015-12-01

This paper proposes the use of a new binary decision tree, which we call a soft decision tree, to improve generalization performance compared to the conventional `hard' decision tree method that is used to cluster context-dependent model parameters in statistical parametric speech synthesis. We apply the method to improve the modeling of fundamental frequency, which is an important factor in synthesizing natural-sounding high-quality speech. Conventionally, hard decision tree-clustered hidden Markov models (HMMs) are used, in which each model parameter is assigned to a single leaf node. However, this `divide-and-conquer' approach leads to data sparsity, with the consequence that it suffers from poor generalization, meaning that it is unable to accurately predict parameters for models of unseen contexts: the hard decision tree is a weak function approximator. To alleviate this, we propose the soft decision tree, which is a binary decision tree with soft decisions at the internal nodes. In this soft clustering method, internal nodes select both their children with certain membership degrees; therefore, each node can be viewed as a fuzzy set with a context-dependent membership function. The soft decision tree improves model generalization and provides a superior function approximator because it is able to assign each context to several overlapped leaves. In order to use such a soft decision tree to predict the parameters of the HMM output probability distribution, we derive the smoothest (maximum entropy) distribution which captures all partial first-order moments and a global second-order moment of the training samples. Employing such a soft decision tree architecture with maximum entropy distributions, a novel speech synthesis system is trained using maximum likelihood (ML) parameter re-estimation and synthesis is achieved via maximum output probability parameter generation. In addition, a soft decision tree construction algorithm optimizing a log-likelihood measure is developed. Both subjective and objective evaluations were conducted and indicate a considerable improvement over the conventional method.

Increasing diveristy of arbuscular mycorrhizal fungi in agroecosystems using specific cover crops

USDA-ARS?s Scientific Manuscript database

Fall-planted cover crops provide a plant host for obligate symbiotic arbuscular mycorrhizal fungi (AMF) during otherwise fallow periods and thus may increase AMF numbers in agroecosystems. Increased AMF numbers should increase mycorrhizal colonization of the subsequent cash crops, which has been li...

Alternative cropping systems for sugarcane

USDA-ARS?s Scientific Manuscript database

Planting cover crops during the fallow period prior to planting sugarcane has the potential to influence not only the following sugarcane crop, but the economics of the production system as a whole. Research was conducted at the USDA, ARS, Sugarcane Research Unit at Houma, LA to determine the impac...

PRIMARY PRODUCTION OF SUMMER-FALLOW WINTER WHEAT AND NATIVE GRASSLANDS IN THE SHORTGRASS STEPPE. (R824993)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Development of a non-dormant germplasm from Thlaspi Arvense (Pennycress)

USDA-ARS?s Scientific Manuscript database

Pennycress is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean production. The seed...

Hardwood tree growth on amended mine soils in west virginia.

PubMed

Wilson-Kokes, Lindsay; Delong, Curtis; Thomas, Calene; Emerson, Paul; O'Dell, Keith; Skousen, Jeff

2013-09-01

Each year surface mining in Appalachia disrupts large areas of forested land. The Surface Mining Control and Reclamation Act requires coal mine operators to establish a permanent vegetative cover after mining, and current practice emphasizes soil compaction and planting of competitive forage grasses to stabilize the site and control erosion. These practices hinder recolonization of native hardwood trees on these reclaimed sites. Recently reclamation scientists and regulators have encouraged re-establishment of hardwood forests on surface mined land through careful selection and placement of rooting media and proper selection and planting of herbaceous and tree species. To evaluate the effect of rooting media and soil amendments, a 2.8-ha experimental plot was established, with half of the plot being constructed of weathered brown sandstone and half constructed of unweathered gray sandstone. Bark mulch was applied to an area covering both sandstone types, and the ends of the plot were hydroseeded with a tree-compatible herbaceous seed mix, resulting in eight soil treatments. Twelve hardwood tree species were planted, and soil chemical properties and tree growth were measured annually from 2007 to 2012. After six growing seasons, average tree volume index was higher for trees grown on brown sandstone (5333 cm) compared with gray sandstone (3031 cm). Trees planted in mulch outperformed trees on nonmulched treatments (volume index of 6187 cm vs. 4194 cm). Hydroseeding with a tree-compatible mix produced greater ground cover (35 vs. 15%) and resulted in greater tree volume index than nonhydroseed areas (5809 vs. 3403 cm). Soil chemical properties were improved by mulch and improved tree growth, especially on gray sandstone. The average pH of brown sandstone was 5.0 to 5.4, and gray sandstone averaged pH 6.9 to 7.7. The mulch treatment on gray sandstone resulted in tree growth similar to brown sandstone alone and with mulch. After 6 yr, tree growth on brown sandstone was about double the tree growth on gray sandstone, and mulch was a successful amendment to improve tree growth. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

PubMed

Wehe, André; Bansal, Mukul S; Burleigh, J Gordon; Eulenstein, Oliver

2008-07-01

DupTree is a new software program for inferring rooted species trees from collections of gene trees using the gene tree parsimony approach. The program implements a novel algorithm that significantly improves upon the run time of standard search heuristics for gene tree parsimony, and enables the first truly genome-scale phylogenetic analyses. In addition, DupTree allows users to examine alternate rootings and to weight the reconciliation costs for gene trees. DupTree is an open source project written in C++. DupTree for Mac OS X, Windows, and Linux along with a sample dataset and an on-line manual are available at http://genome.cs.iastate.edu/CBL/DupTree

Incorporating additional tree and environmental variables in a lodgepole pine stem profile model

Treesearch

John C. Byrne

1993-01-01

A new variable-form segmented stem profile model is developed for lodgepole pine (Pinus contorta) trees from the northern Rocky Mountains of the United States. I improved estimates of stem diameter by predicting two of the model coefficients with linear equations using a measure of tree form, defined as a ratio of dbh and total height. Additional improvements were...

Institute of forest tree breeding: Improvement and gene conservation of iconic tree species in the 21st Century

Treesearch

C. Dana Nelson; Jennifer L. Koch

2017-01-01

Our nation’s forests and forest trees are undergoing unprecedented stress from invasive pathogens and pests, climate change, land fragmentation, and urbanization. Some of these stresses are acute, either regionally or locally, and are having significant negative impacts on regional and local economies and ecosystems. Managing and improving the genetic resources of...

Using tree diversity to compare phylogenetic heuristics.

PubMed

Sul, Seung-Jin; Matthews, Suzanne; Williams, Tiffani L

2009-04-29

Evolutionary trees are family trees that represent the relationships between a group of organisms. Phylogenetic heuristics are used to search stochastically for the best-scoring trees in tree space. Given that better tree scores are believed to be better approximations of the true phylogeny, traditional evaluation techniques have used tree scores to determine the heuristics that find the best scores in the fastest time. We develop new techniques to evaluate phylogenetic heuristics based on both tree scores and topologies to compare Pauprat and Rec-I-DCM3, two popular Maximum Parsimony search algorithms. Our results show that although Pauprat and Rec-I-DCM3 find the trees with the same best scores, topologically these trees are quite different. Furthermore, the Rec-I-DCM3 trees cluster distinctly from the Pauprat trees. In addition to our heatmap visualizations of using parsimony scores and the Robinson-Foulds distance to compare best-scoring trees found by the two heuristics, we also develop entropy-based methods to show the diversity of the trees found. Overall, Pauprat identifies more diverse trees than Rec-I-DCM3. Overall, our work shows that there is value to comparing heuristics beyond the parsimony scores that they find. Pauprat is a slower heuristic than Rec-I-DCM3. However, our work shows that there is tremendous value in using Pauprat to reconstruct trees-especially since it finds identical scoring but topologically distinct trees. Hence, instead of discounting Pauprat, effort should go in improving its implementation. Ultimately, improved performance measures lead to better phylogenetic heuristics and will result in better approximations of the true evolutionary history of the organisms of interest.

Nanotechnology for forest products. Part 2

Treesearch

Theodore Wegner; Phil Jones

2005-01-01

In planning for the Nanotechnology for the Forest products Industry Workshop, we considered many different options for organizing technical focus areas for breakout discussion sessions. We felt the fallowing R&D focus areas provide the best path forward for a nanotechnology roadmap by identifying the underlying science and technology needed: also, they foster...

Impact of fertilizer, corn residue, and cover crops on mycorrhizal inoculum potential and arbuscular mycorrhizal fungi associations

USDA-ARS?s Scientific Manuscript database

Arbuscular Mycorrhizal Fungi (AMF) increase nutrient and water acquisition for mycorrhizal-susceptible plants, which may lead to higher yields. However, intensive agricultural practices such as tilling, fallow treatments, and inorganic nutrient application reduce soil AMF. The purpose of the three e...

Crop rotation and residue management effects on deficit irrigated cotton and corn

USDA-ARS?s Scientific Manuscript database

Compared with disk tillage (DT), no-tillage (NT) retains residue and increases precipitation capture, which has the potential to reduce irrigation withdrawals from the declining Ogallala Aquifer. Our objective was to quantify DT and NT effects on water conservation during fallow and the subsequent y...

Simulation of Climate Change Impacts on Wheat-Fallow Cropping Systems

USDA-ARS?s Scientific Manuscript database

Agricultural system simulation models are predictive tools for assessing climate change impacts on crop production. In this study, RZWQM2 that contains the DSSAT 4.0-CERES model was evaluated for simulating climate change impacts on wheat growth. The model was calibrated and validated using data fro...

Dust-associated Microbiomes from Dryland Wheat Fields Differ with Tillage Practice and Biosolids Application

USDA-ARS?s Scientific Manuscript database

Wind erosion is a significant threat to the productivity and sustainability of agricultural soils. In the dryland winter wheat (Triticum aestivum L.)-fallow region of Inland Pacific Northwest of the USA (PNW), farmers increasingly use conservation tillage practices to control wind erosion. In addit...

Detection and impact of BVDV in wild ruminants

USDA-ARS?s Scientific Manuscript database

While BVDV is most commonly associated with cattle there is evidence, based on virus isolation and/or serology, that BVDV replicates in a wide variety of domesticated and wild ruminants including cervidae such as white tail deer, mule deer, fallow deer, elk, red deer, roe deer, and mousedeer and cap...

Erodibility from natural rainfall events on soils of the Pacific Northwest

USDA-ARS?s Scientific Manuscript database

Erosion event data from long-term USLE-size continuous fallow plots (Palouse silt loam) at the Palouse Conservation Field Station (PCFS) at Pullman, WA and similar plots (Thatuna silt loam) near the Columbia Plateau Conservation Research Center (CPCRC) at Pendleton, OR provided an opportunity to cal...

Spring wheat production and associated pests in conventional and diversified cropping systems in north central Montana

USDA-ARS?s Scientific Manuscript database

Producers in the northern Plains are diversifying and intensifying traditional wheat-based cropping systems by reducing summer fallow and including legume and oilseed crops. This study examined the influence of diversification and intensification on spring wheat yield and quality, and associated ins...

iPads as a Literacy Teaching Tool in Early Childhood

ERIC Educational Resources Information Center

Beschorner, Beth; Hutchison, Amy

2013-01-01

Considering the increased influence of digital technologies on daily life (Fallows, 2004) and young children's increased use of interactive technologies (Children Now, 2007), early childhood educators are beginning to think about the role of technology in their classrooms. Many preschool programs are beginning to purchase iPads, or similar…

iPads as a Literacy Teaching Tool in Early Childhood

ERIC Educational Resources Information Center

Beschorner, Beth; Hutchison, Amy

2013-01-01

Considering the increased influence of digital technologies on daily life (Fallows, 2004) and young children's increased use of interactive technologies ("Children Now," 2007), early childhood educators are beginning to think about the role of technology in their classrooms. Many preschool programs are beginning to purchase iPads, or…

Soil amendments yield persisting effects on the microbial communities--a 7-year study

USDA-ARS?s Scientific Manuscript database

Soil microbial communities are sensitive to carbon amendments and largely control the decomposition and accumulation of soil organic matter. In this study, we evaluated whether the type of carbon amendment applied to wheat-cropped or fallow soil imparted lasting effects on the microbial community w...

Measurement of surface energy balance components in dryland wheat/fallow and limited-irrigation corn

USDA-ARS?s Scientific Manuscript database

Water evaporation from soil and plant surfaces and plant transpiration comprise land surface/canopy evapotranspiration (ET), which is essential to estimate for land-atmosphere interaction and crop water use. There are no direct measurements of ET, and the most direct methods (e.g., weighing lysimet...

Soil characteristics and wind erosion potential of wheat-oilseed-fallow cropping systems

USDA-ARS?s Scientific Manuscript database

Oilseeds are integral to the production of biofuels and diversifying rainfed cropping systems in the Pacific Northwest United States (PNW). However, there is evidence to suggest greater potential for wind erosion when growing oilseeds in wheat rotations. Little is known concerning the impact of grow...

Windblown soil surface characteristics of a wheat-oilseed-fallow cropping system

USDA-ARS?s Scientific Manuscript database

The production of biofuels is dependent upon oilseed feedstocks in the Pacific Northwest United States (PNW), but evidence suggests that wind erosion may be enhanced as a result of growing oilseeds in conventional wheat rotations. Little is known concerning the impact of growing oilseeds on soil cha...

Kenaf and cowpea as sugarcane cover crops

USDA-ARS?s Scientific Manuscript database

The use of cover crops during the fallow period prior to planting sugarcane has the potential to influence not only the following sugarcane crop, but the economics of the production system as a whole. Typically, a Louisiana sugarcane field is replanted every four years due to declining yields, and,...

Life-cycle analysis of dryland greenhouse gases affected by cropping sequence and nitrogen fertilization

USDA-ARS?s Scientific Manuscript database

Little information is available about management practices effect on net global warming potential (GWP) and greenhouse gas intensity (GHGI) under dryland cropping systems. We evaluated the effects of cropping sequences (conventional till malt barley-fallow [CTB-F], no-till malt barley-pea [NTB-P], a...

Thlaspi arvense (Pennycress): An off-season energy crop within the corn-soybean rotation

USDA-ARS?s Scientific Manuscript database

Pennycress is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean production. The seed...

Advancements of pennycress as a biofuel and the synthesis of estolides thereof

USDA-ARS?s Scientific Manuscript database

Pennycress (Thlaspi arvense L.) is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean...

76 FR 17379 - National Tree-Marking Paint Committee Meeting

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-29

... DEPARTMENT OF AGRICULTURE Forest Service National Tree-Marking Paint Committee Meeting AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The National Tree-Marking Paint Committee will... related to improvements in, concerns about, and the handling and use of tree-marking paint by personnel of...

77 FR 20612 - National Tree-Marking Paint Committee Meeting

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-05

... DEPARTMENT OF AGRICULTURE Forest Service National Tree-Marking Paint Committee Meeting AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The National Tree-Marking Paint Committee will... related to improvements in, concerns about, and the handling and use of tree-marking paint by personnel of...

The Re-Think Tree.

ERIC Educational Resources Information Center

Gear, Jim

1993-01-01

The Re-Think Tree is a simple framework to help individuals assess and improve their behaviors related to environmental issues. The branches of the tree in order of priority are refuse, reduce, re-use, and recycle. Roots of the tree include such things as public opinion, education, and watchdog groups. (KS)

Phylogenetically diverse AM fungi from Ecuador strongly improve seedling growth of native potential crop trees.

PubMed

Schüßler, Arthur; Krüger, Claudia; Urgiles, Narcisa

2016-04-01

In many deforested regions of the tropics, afforestation with native tree species could valorize a growing reservoir of degraded, previously overused and abandoned land. The inoculation of tropical tree seedlings with arbuscular mycorrhizal fungi (AM fungi) can improve tree growth and viability, but efficiency may depend on plant and AM fungal genotype. To study such effects, seven phylogenetically diverse AM fungi, native to Ecuador, from seven genera and a non-native AM fungus (Rhizophagus irregularis DAOM197198) were used to inoculate the tropical potential crop tree (PCT) species Handroanthus chrysanthus (synonym Tabebuia chrysantha), Cedrela montana, and Heliocarpus americanus. Twenty-four plant-fungus combinations were studied in five different fertilization and AMF inoculation treatments. Numerous plant growth parameters and mycorrhizal root colonization were assessed. The inoculation with any of the tested AM fungi improved seedling growth significantly and in most cases reduced plant mortality. Plants produced up to threefold higher biomass, when compared to the standard nursery practice. AM fungal inoculation alone or in combination with low fertilization both outperformed full fertilization in terms of plant growth promotion. Interestingly, root colonization levels for individual fungi strongly depended on the host tree species, but surprisingly the colonization strength did not correlate with plant growth promotion. The combination of AM fungal inoculation with a low dosage of slow release fertilizer improved PCT seedling performance strongest, but also AM fungal treatments without any fertilization were highly efficient. The AM fungi tested are promising candidates to improve management practices in tropical tree seedling production.

Decay fungi of oaks and associated hardwoods for western arborists

Treesearch

Jessie A. Glaeser; Kevin T. Smith

2010-01-01

Examination of trees for the presence and extent of decay should be part of any hazard tree assessment. Identification of the fungi responsible for the decay improves prediction of tree performance and the quality of management decisions, including tree pruning or removal. Scouting for Sudden Oak Death (SOD) in the West has drawn attention to hardwood tree species,...

Calibration and Validation of Landsat Tree Cover in the Taiga-Tundra Ecotone

NASA Technical Reports Server (NTRS)

Montesano, Paul Mannix; Neigh, Christopher S. R.; Sexton, Joseph; Feng, Min; Channan, Saurabh; Ranson, Kenneth J.; Townshend, John R.

2016-01-01

Monitoring current forest characteristics in the taiga-tundra ecotone (TTE) at multiple scales is critical for understanding its vulnerability to structural changes. A 30 m spatial resolution Landsat-based tree canopy cover map has been calibrated and validated in the TTE with reference tree cover data from airborne LiDAR and high resolution spaceborne images across the full range of boreal forest tree cover. This domain-specific calibration model used estimates of forest height to determine reference forest cover that best matched Landsat estimates. The model removed the systematic under-estimation of tree canopy cover greater than 80% and indicated that Landsat estimates of tree canopy cover more closely matched canopies at least 2 m in height rather than 5 m. The validation improved estimates of uncertainty in tree canopy cover in discontinuous TTE forests for three temporal epochs (2000, 2005, and 2010) by reducing systematic errors, leading to increases in tree canopy cover uncertainty. Average pixel-level uncertainties in tree canopy cover were 29.0%, 27.1% and 31.1% for the 2000, 2005 and 2010 epochs, respectively. Maps from these calibrated data improve the uncertainty associated with Landsat tree canopy cover estimates in the discontinuous forests of the circumpolar TTE.

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea.

PubMed

McDonald, Daniel; Price, Morgan N; Goodrich, Julia; Nawrocki, Eric P; DeSantis, Todd Z; Probst, Alexander; Andersen, Gary L; Knight, Rob; Hugenholtz, Philip

2012-03-01

Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker gene and metagenomic surveys, which continue to reveal novel species at a remarkable rate. Greengenes is a dedicated full-length 16S rRNA gene database that provides users with a curated taxonomy based on de novo tree inference. We developed a 'taxonomy to tree' approach for transferring group names from an existing taxonomy to a tree topology, and used it to apply the Greengenes, National Center for Biotechnology Information (NCBI) and cyanoDB (Cyanobacteria only) taxonomies to a de novo tree comprising 408,315 sequences. We also incorporated explicit rank information provided by the NCBI taxonomy to group names (by prefixing rank designations) for better user orientation and classification consistency. The resulting merged taxonomy improved the classification of 75% of the sequences by one or more ranks relative to the original NCBI taxonomy with the most pronounced improvements occurring in under-classified environmental sequences. We also assessed candidate phyla (divisions) currently defined by NCBI and present recommendations for consolidation of 34 redundantly named groups. All intermediate results from the pipeline, which includes tree inference, jackknifing and transfer of a donor taxonomy to a recipient tree (tax2tree) are available for download. The improved Greengenes taxonomy should provide important infrastructure for a wide range of megasequencing projects studying ecosystems on scales ranging from our own bodies (the Human Microbiome Project) to the entire planet (the Earth Microbiome Project). The implementation of the software can be obtained from http://sourceforge.net/projects/tax2tree/.

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

PubMed Central

McDonald, Daniel; Price, Morgan N; Goodrich, Julia; Nawrocki, Eric P; DeSantis, Todd Z; Probst, Alexander; Andersen, Gary L; Knight, Rob; Hugenholtz, Philip

2012-01-01

Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker gene and metagenomic surveys, which continue to reveal novel species at a remarkable rate. Greengenes is a dedicated full-length 16S rRNA gene database that provides users with a curated taxonomy based on de novo tree inference. We developed a ‘taxonomy to tree' approach for transferring group names from an existing taxonomy to a tree topology, and used it to apply the Greengenes, National Center for Biotechnology Information (NCBI) and cyanoDB (Cyanobacteria only) taxonomies to a de novo tree comprising 408 315 sequences. We also incorporated explicit rank information provided by the NCBI taxonomy to group names (by prefixing rank designations) for better user orientation and classification consistency. The resulting merged taxonomy improved the classification of 75% of the sequences by one or more ranks relative to the original NCBI taxonomy with the most pronounced improvements occurring in under-classified environmental sequences. We also assessed candidate phyla (divisions) currently defined by NCBI and present recommendations for consolidation of 34 redundantly named groups. All intermediate results from the pipeline, which includes tree inference, jackknifing and transfer of a donor taxonomy to a recipient tree (tax2tree) are available for download. The improved Greengenes taxonomy should provide important infrastructure for a wide range of megasequencing projects studying ecosystems on scales ranging from our own bodies (the Human Microbiome Project) to the entire planet (the Earth Microbiome Project). The implementation of the software can be obtained from http://sourceforge.net/projects/tax2tree/. PMID:22134646

36 CFR 230.3 - National program administration.

Code of Federal Regulations, 2011 CFR

2011-07-01

... implementation of such policy and procedure over the life of the Program. (b) The Chief shall annually distribute... State foresters. (c) Tree planting, tree maintenance, and tree improvement are national priorities for...

36 CFR 230.3 - National program administration.

Code of Federal Regulations, 2010 CFR

2010-07-01

... implementation of such policy and procedure over the life of the Program. (b) The Chief shall annually distribute... State foresters. (c) Tree planting, tree maintenance, and tree improvement are national priorities for...

Economic analysis of tree improvement: A status report

Treesearch

George F. Dutrow

1974-01-01

Review of current literature establishes that most authors believe that tree improvement expands production, although some point out drawbacks and alternatives. Both softwood and hardwood improvement programs have been analyzed. The authors used various models, economic assumptions, and standards of measurement, but available data were limited. Future models shouId...

City of Minneapolis, Minnesota Municipal Tree Resource Analysis

Treesearch

E.G. McPherson; J.R. Simpson; P.J. Peper; S.E. Maco; S.L. Gardner; K.E. Vargas; S. Cozad; Q. Xiao

2005-01-01

Minneapolis, a vibrant city, renowned for its lakes, its livability, and its cultural wealth, maintains trees as an integral component of the urban infrastructure. Research indicates that healthy trees can mitigate impacts associated with the built environment by reducing stormwater runoff, energy consumption, and air pollutants. Trees improve urban life, making...

Decoding tree DNA

Treesearch

M. Thompson Conkle

1986-01-01

Check the laboratory reports after your next physical. You'll find information on a number of biochemical processes. Procedures like those used in the medical sciences are yielding valuable information about genetic differences among trees and tree pests. New procedures that provide ways to isolate and move genes are advancing progress in tree improvement. These...

Patterns of thinking about phylogenetic trees: A study of student learning and the potential of tree thinking to improve comprehension of biological concepts

NASA Astrophysics Data System (ADS)

Naegle, Erin

Evolution education is a critical yet challenging component of teaching and learning biology. There is frequently an emphasis on natural selection when teaching about evolution and conducting educational research. A full understanding of evolution, however, integrates evolutionary processes, such as natural selection, with the resulting evolutionary patterns, such as species divergence. Phylogenetic trees are models of evolutionary patterns. The perspective gained from understanding biology through phylogenetic analyses is referred to as tree thinking. Due to the increasing prevalence of tree thinking in biology, understanding how to read phylogenetic trees is an important skill for students to learn. Interpreting graphics is not an intuitive process, as graphical representations are semiotic objects. This is certainly true concerning phylogenetic tree interpretation. Previous research and anecdotal evidence report that students struggle to correctly interpret trees. The objective of this research was to describe and investigate the rationale underpinning the prior knowledge of introductory biology students' tree thinking Understanding prior knowledge is valuable as prior knowledge influences future learning. In Chapter 1, qualitative methods such as semi-structured interviews were used to explore patterns of student rationale in regard to tree thinking. Seven common tree thinking misconceptions are described: (1) Equating the degree of trait similarity with the extent of relatedness, (2) Environmental change is a necessary prerequisite to evolution, (3) Essentialism of species, (4) Evolution is inherently progressive, (5) Evolution is a linear process, (6) Not all species are related, and (7) Trees portray evolution through the hybridization of species. These misconceptions are based in students' incomplete or incorrect understanding of evolution. These misconceptions are often reinforced by the misapplication of cultural conventions to make sense of trees. Chapter 2 explores the construction, validity, and reliability of a tree thinking concept inventory. Concept inventories are research based instruments that diagnose faulty reasoning among students. Such inventories are tools for improving teaching and learning of concepts. Test scores indicate that tree thinking misconceptions are held by novice and intermediate biology students. Finally, Chapter 3 presents a tree thinking rubric. The rubric aids teachers in selecting and improving introductory tree thinking learning exercises that address students' tree thinking misconceptions.

Million trees Los Angeles canopy cover and benefit assessment

Treesearch

E.G. McPherson; J.R. Simpson; Q. Xiao; C. Wu

2011-01-01

The Million Trees LA initiative intends to improve Los Angeles’s environment through planting and stewardship of 1 million trees. The purpose of this study was to measure Los Angeles’s existing tree canopy cover (TCC), determine if space exists for 1 million additional trees, and estimate future benefits from the planting. High-resolution QuickBird remote sensing data...

A practical alternative to single tree selection?

Treesearch

Gary W. Miller; H. Clay Smith

1993-01-01

When landowners want to develop and maintain an uneven-aged tree structure in eastern hardwood stands, single-tree selection often is suggested as the only advisable, long-term partial regeneration harvest method. Single-tree selection is preferred because it provides a means for improving quality and controlling stocking of the residual stand necessary for sustained...

Effects of peach tree root system morphology and transpiration on leaf nitrogen and phosphorus

USDA-ARS?s Scientific Manuscript database

Adequate mineral nutrition is critical for high fruit quality and sustained yield of fruit trees. It is likely that nutritional competence of a fruit tree depends on several physiological and morphological traits that affect nutrient uptake. Fruit trees with improved root systems (own-rooted or as ...

Shoot growth orientation in trees is influenced by gravitropic control via a signaling pathway that includes TAC1 and LAZY1

USDA-ARS?s Scientific Manuscript database

Understanding the molecular basis behind tree architecture could have significant impacts in tree crop agriculture and forestry. The ability to manipulate tree branch growth and patterning could lead to significant productivity improvements through reduced pesticide use, reduced labor for harvestin...

City of Berkeley, California Municipal Tree Resource Analysis

Treesearch

S.E. Maco; E.G. McPherson; J.R. Simpson; P.J. Peper; Q. Xiao

2005-01-01

Vibrant, renowned for its livability and cultural wealth, the city of Berkeley maintains trees as an integral component of the urban infrastructure. Research indicates that healthy trees can mitigate impacts associated with the built environment by reducing stormwater runoff, energy consumption, and air pollutants. Put simply, trees improve urban life, making Berkeley...

Urban tree effects on fine particulate matter and human health

Treesearch

David J. Nowak

2014-01-01

Overall, city trees reduce particulate matter and provide substantial health benefits; but under certain conditions, they can locally increase particulate matter concentrations. Urban foresters need to understand how trees affect particulate matter so they can select proper species and create appropriate designs to improve air quality. This article details trees'...

Individualistic and Time-Varying Tree-Ring Growth to Climate Sensitivity

PubMed Central

Carrer, Marco

2011-01-01

The development of dendrochronological time series in order to analyze climate-growth relationships usually involves first a rigorous selection of trees and then the computation of the mean tree-growth measurement series. This study suggests a change in the perspective, passing from an analysis of climate-growth relationships that typically focuses on the mean response of a species to investigating the whole range of individual responses among sample trees. Results highlight that this new approach, tested on a larch and stone pine tree-ring dataset, outperforms, in terms of information obtained, the classical one, with significant improvements regarding the strength, distribution and time-variability of the individual tree-ring growth response to climate. Moreover, a significant change over time of the tree sensitivity to climatic variability has been detected. Accordingly, the best-responder trees at any one time may not always have been the best-responders and may not continue to be so. With minor adjustments to current dendroecological protocol and adopting an individualistic approach, we can improve the quality and reliability of the ecological inferences derived from the climate-growth relationships. PMID:21829523

An inventory of trees in Dublin city centre.

PubMed

Ningal, Tine; Mills, Gerald; Smithwick, Pamela

2010-01-01

While urban areas are often considered to be comprised chiefly of artificial surfaces, they can contain a substantial portion of green space and a great diversity of natural habitats. These spaces include public parks, private gardens and street trees, all of which can provide valuable environmental services, such as improved air quality. Trees play a particular role in cities as they are often placed along roadsides and in the median strip of busy streets. As such they regulate access to sunshine, restrict airflow, provide shelter, scavenge air pollutants and manage noise at the street level. A tree planting policy can be an important part of a broader environmental strategy aimed at improving the quality of life in urban areas but this requires up-to-date knowledge of the current tree stock, which does not exist for Dublin. This article presents an inventory of trees in Dublin's city centre, defined as the area between the Grand and Royal canals. The results show that there are over 10,000 trees in the study area representing a density of 684 trees km-2 or one tree to approximately every 50 residents of the city centre. The tree canopy extent when in full foliage was nearly 1 km2 in extent or 6% of the study area. A more detailed analysis of those trees planted along streets shows little species variation but clear distinction in the sizes of trees, which is indicative of the age of planting. These data are used to estimate the carbon stored in Dublin's trees.

Improved canopy reflectance modeling and scene inference through improved understanding of scene pattern

NASA Technical Reports Server (NTRS)

Franklin, Janet; Simonett, David

1988-01-01

The Li-Strahler reflectance model, driven by LANDSAT Thematic Mapper (TM) data, provided regional estimates of tree size and density within 20 percent of sampled values in two bioclimatic zones in West Africa. This model exploits tree geometry in an inversion technique to predict average tree size and density from reflectance data using a few simple parameters measured in the field (spatial pattern, shape, and size distribution of trees) and in the imagery (spectral signatures of scene components). Trees are treated as simply shaped objects, and multispectral reflectance of a pixel is assumed to be related only to the proportions of tree crown, shadow, and understory in the pixel. These, in turn, are a direct function of the number and size of trees, the solar illumination angle, and the spectral signatures of crown, shadow and understory. Given the variance in reflectance from pixel to pixel within a homogeneous area of woodland, caused by the variation in the number and size of trees, the model can be inverted to give estimates of average tree size and density. Because the inversion is sensitive to correct determination of component signatures, predictions are not accurate for small areas.

Soil Carbon Pools in Dryland Agroecosystems as Impacted By Several Years of Drought

USDA-ARS?s Scientific Manuscript database

No-till and increased cropping intensity (CI) can increase yield and soil organic carbon (SOC) in the US Great Plains compared with traditional wheat (Triticum aestivum L.) – fallow management. However, gains in SOC, and other C pools, may not be permanent. Increasing frequency of drought may redu...

Steers grazing of a rye cover crop influences growth of rye and no-till cotton

USDA-ARS?s Scientific Manuscript database

Small grain cover crops offer opportunities for grazing but effects on following row crops are not well understood. From 1999 through 2008, stocker steers sequence grazed small grains in a 2-paddock rye-cotton-wheat-fallow- rye rotation. Treatments imposed on rye included 1) zero-grazing from 1999; ...

Soil and water conservation in the Pacific Northwest through no-tillage and intensified crop rotations

USDA-ARS?s Scientific Manuscript database

The winter wheat (Triticum aestivum L.) summer fallow rotation typically practiced in the intermediate precipitation zone [300-450 mm (12-18 in)] of the inland Pacific Northwest has proven to be economically stable for producers in this region. However multiple tillage operations are used to control...

Crop residues of the contiguous United States: Balancing feedstock and soil needs with conservation tillage, cover crops, and biochar

USDA-ARS?s Scientific Manuscript database

Crop residues are among the cellulosic feedstocks expected to provide renewable energy. The availability of crop species and residue availability varies across the United States. Estimates of harvestable residues must consider all the residues produced during the entire rotation. Inclusion of fallow...

77 FR 26578 - Draft Environmental Impact Statement/Environmental Impact Report and Notice of Public Meeting for...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-04

... fallowing) from the Exchange Contractors to other CVP contractors, to Reclamation's Refuge Water Supply... of CVP water from the Exchange Contractors to: The RWSP to meet water supply needs (Incremental Level... objectives: Develop supplemental water supplies from willing seller agencies within the Exchange Contractors...

Simulated soil organic carbon responses to crop rotation, tillage, and climate change in North Dakota

USDA-ARS?s Scientific Manuscript database

Understanding how agricultural management and climate change affect soil organic carbon (SOC) stocks is particularly important for dryland agriculture regions that have been losing SOC over time due to fallow and tillage practices, and it can lead to development of agricultural practice(s) that redu...

Resistance of fallow deer (dama dama) to chronic wasting disease under natural exposure in a heavily contaminated environment

USDA-ARS?s Scientific Manuscript database

Chronic wasting disease or CWD is a transmissible spongiform encephalopathy or prion disorder of cervid ruminants in several regions of the US and Canada. The prion disorders are characterized by misfolding of the host cellular prion protein into a relatively protease resistant and potentially neur...

Wind erosion potential of a winter wheat–summer fallow rotation after land application of biosolids

USDA-ARS?s Scientific Manuscript database

While land application of biosolids is recognized as a sustainable management practice for enhancing soil health, no studies have determined the effects of biosolids on soil wind erosion. Wind erosion potential of a silt loam was assessed using a portable wind tunnel after applying synthetic and bio...

Soil characteristics and associated wind erosion potential altered by oilseeds in wheat-based cropping systems

USDA-ARS?s Scientific Manuscript database

Oilseeds are integral to the production of biofuels and diversifying rainfed cropping systems in the Pacific Northwest. However, there is evidence to suggest greater potential for wind erosion when growing oilseeds in wheat-based rotations when tillage is used during fallow. Little is known concerni...

Yield tradeoffs and nitrogen between pennycress, camelina, and soybean in relay- and double-crop systems

USDA-ARS?s Scientific Manuscript database

To gain additional value from land during winter fallow periods, growers in the Upper Midwest are considering winter annual oilseed crops such as field pennycress (Thlaspi arvense L.) and winter camelina (Camelina sativa L.) as value-added additions to the corn-soybean rotation. The objective of thi...

Evapotranspiration in winter wheat under different grazing and tillage practices in the southern Great Plains

USDA-ARS?s Scientific Manuscript database

Precipitation in the Southern Great Plains (SGP) is highly variable both spatially and temporally with recurring periods of severe drought. Winter wheat (Triticum aestivum L.) – summer fallow system with conventional tillage is the principal dryland cropping system in this region for both grazing an...

Remote Sensing Technologies Mitigate Drought

NASA Technical Reports Server (NTRS)

2015-01-01

Ames Research Center has partnered with the California Department of Water Resources to develop satellite-based technologies to mitigate drought conditions. One project aims to help water managers adjust their irrigation to match the biological needs of each crop, and another involves monitoring areas where land is fallow so emergency relief can more quickly aid affected communities.

Diazotroph community structure and abundance in wheat-fallow and wheat-pea crop rotations

USDA-ARS?s Scientific Manuscript database

Biological input of nitrogen (N) from the atmosphere either through free-living diazotrophs or legume-associated rhizobia can help alleviate fertilizer use in agricultural systems. In this study, we investigated the effect of N fertilizer and winter pea (Pisum sativum L.) crop on the diversity and a...

Sediment and PM10 flux from no-tillage cropping systems in the Pacific Northwest

USDA-ARS?s Scientific Manuscript database

Wind erosion is a concern in the Inland Pacific Northwest (PNW) United States where the emission of fine particulates from winter wheat – summer fallow (WW/SF) dryland cropping systems during high winds degrade air quality. Although no-tillage cropping systems are not yet economically viable, these ...

Surface effects on water storage under dryland summer fallow, a lysimeter study

USDA-ARS?s Scientific Manuscript database

Small changes in short and long term soil water storage can have large effects on crop productivity in semi-arid climates. To optimize tillage and residue management, we need to measure evaporation from a range of treatments on contrasting soil types. Sixty low-cost, low-maintenance lysimeters were ...

Improved data retrieval from TreeBASE via taxonomic and linguistic data enrichment

PubMed Central

Anwar, Nadia; Hunt, Ela

2009-01-01

Background TreeBASE, the only data repository for phylogenetic studies, is not being used effectively since it does not meet the taxonomic data retrieval requirements of the systematics community. We show, through an examination of the queries performed on TreeBASE, that data retrieval using taxon names is unsatisfactory. Results We report on a new wrapper supporting taxon queries on TreeBASE by utilising a Taxonomy and Classification Database (TCl-Db) we created. TCl-Db holds merged and consolidated taxonomic names from multiple data sources and can be used to translate hierarchical, vernacular and synonym queries into specific query terms in TreeBASE. The query expansion supported by TCl-Db shows very significant information retrieval quality improvement. The wrapper can be accessed at the URL The methodology we developed is scalable and can be applied to new data, as those become available in the future. Conclusion Significantly improved data retrieval quality is shown for all queries, and additional flexibility is achieved via user-driven taxonomy selection. PMID:19426482

Carcass and meat characteristics from farm-raised and wild fallow deer (Dama dama) and red deer (Cervus elaphus): A review.

PubMed

Kudrnáčová, Eva; Bartoň, Luděk; Bureš, Daniel; Hoffman, Louwrens C

2018-07-01

Deer species are utilised for food, hunting and other products throughout the world. Consumers are typically exposed to venison derived predominantly from both farm-raised or wild fallow (Dama dama) and red deer (Cervus elaphus). The production of venison under farm conditions, compared to the meat of deer hunted in the wild, allows for a regular supply of a consistently good meat. It is lean, tasty, and rich in proteins and minerals, with a low content of fat and cholesterol. Overall, the worldwide demand for meat is still growing, and both the potential of farming deer species and their use as meat producers have led to an increased interest in venison. The current knowledge about various factors (e.g. nutrition, age, sex, condition, season) affecting venison and game meat has significantly increased during past decades but information regarding the interaction between production system or pre- and post-slaughter handling and ultimate deer meat quality are still very limited. Copyright © 2018 Elsevier Ltd. All rights reserved.

A comparative analysis of microbiomes in natural and anthropogenically disturbed soils of northwestern Kazakhstan

NASA Astrophysics Data System (ADS)

Pershina, E. V.; Ivanova, E. A.; Nagieva, A. G.; Zhiengaliev, A. T.; Chirak, E. L.; Andronov, E. E.; Sergaliev, N. Kh.

2016-06-01

The goal of this study was to determine the relationships between the structure of the soil microbiome and the agroecological state of soils by the example of natural undisturbed (steppe areas) and anthropogenically disturbed (pastures, croplands, fallows) areas in the territory of northwestern Kazakhstan. The highest abundance of proteobacteria was found in the anthropogenically disturbed of fallows and in undisturbed soils; in other cases, actinobacteria and representatives of the Firmicutes phylum predominated. Different kinds of anthropogenic impacts resulted in the decrease in the portions of bacteria from the Acidobacteria, Gemmatimonadetes, and Firmicutes phyla. In the disturbed soils, the portions of bacteria from the Erysipelothrix, Mycobacterium, Methylibium, Skermanella, Ralstonia, Lactococcus, Bdellovibrio, Candidatus nitrososphaera, Catellatospora, Cellulomonas, Stenotrophomonas, and Steroidobacter genera increased. Bacteria of the Erysipelothrix and Methylibium genera occurred only in the undisturbed soils. The anthropogenically disturbed and undisturbed soils differed significantly in the taxonomic structure of their microbiomes forming two separate clusters, which confirms the efficiency of using the data on the structure of soil microbiomes when assessing the agroecological status of soils.

Forest Watch: a K-12 Outreach Program to Engage Young Students in Authentic, Hands-On Science

NASA Astrophysics Data System (ADS)

Rock, B. N.; Gagnon, M.

2008-12-01

The Forest Watch Program is a K-12 science outreach program developed at the University of New Hampshire (UNH) in 1991. The program engages pre-college teachers and their students in assisting researchers at UNH in the assessment of the state-of-health of white pine (Pinus strobus), a known bio- indicator species for exposure to elevated levels of ground-level ozone. Students participate in three types of activities: 1. selection, collection, and analysis of needle samples from five permanently tagged white pine trees near their school; 2. Study of needles in their classroom and sending a set of needles to UNH for spectral analysis; and 3. analysis of remote sensing data (Landsat TM) provided of their local area using freeware software (MultiSpec). Student-derived foliar symptomology, needle length, needle retention, and tree biometrics, plus the spectral indices, allow UNH researchers to characterize annual variations in tree state-of-health, and to correlate that state-of-health with annual summer ozone levels collected by the EPA and state environmental monitoring networks. The results suggest that regional air quality and state- of-health of trees has improved since 1991. Annual student data and the yearly spectral variations, for the same trees, suggest that white pine health has improved dramatically since 1997/8. This improvement in tree health corresponds with improved regional air quality. An evaluation of student data reliability has been conducted and suggests that the DBH measurements are a most reliable indicator of tree growth. Student data are more reliable if multiple sets of measurements are made and averaged together, compared with single sets of measurements. Based on both student data and spectral analysis of student-provided branch samples, the greatest damage (chlorosis) occurs in trees located along the seacoast areas. Participation in Forest Watch introduces students to the scientific method via an authentic research program. The program is designed in partnership with participating teachers, and thus meets New England state science and mathematics curricula for K-12 education. Student participation in Forest Watch has resulted in an improved understanding of inter-annual white pine state-of-health response to improved air quality across the New England region.

7 CFR 1214.18 - Promotion.

Code of Federal Regulations, 2013 CFR

2013-01-01

... AND ORDERS; MISCELLANEOUS COMMODITIES), DEPARTMENT OF AGRICULTURE CHRISTMAS TREE PROMOTION, RESEARCH, AND INFORMATION ORDER Christmas Tree Promotion, Research, and Information Order Definitions § 1214.18... favorable image of Christmas trees to the general public with the intent of improving the perception and...

7 CFR 1214.18 - Promotion.

Code of Federal Regulations, 2014 CFR

2014-01-01

... AND ORDERS; MISCELLANEOUS COMMODITIES), DEPARTMENT OF AGRICULTURE CHRISTMAS TREE PROMOTION, RESEARCH, AND INFORMATION ORDER Christmas Tree Promotion, Research, and Information Order Definitions § 1214.18... favorable image of Christmas trees to the general public with the intent of improving the perception and...

7 CFR 1214.18 - Promotion.

Code of Federal Regulations, 2012 CFR

2012-01-01

... AND ORDERS; MISCELLANEOUS COMMODITIES), DEPARTMENT OF AGRICULTURE CHRISTMAS TREE PROMOTION, RESEARCH, AND INFORMATION ORDER Christmas Tree Promotion, Research, and Information Order Definitions § 1214.18... favorable image of Christmas trees to the general public with the intent of improving the perception and...

Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.

PubMed

Fouquier, Jennifer; Rideout, Jai Ram; Bolyen, Evan; Chase, John; Shiffer, Arron; McDonald, Daniel; Knight, Rob; Caporaso, J Gregory; Kelley, Scott T

2016-02-24

Fungi play critical roles in many ecosystems, cause serious diseases in plants and animals, and pose significant threats to human health and structural integrity problems in built environments. While most fungal diversity remains unknown, the development of PCR primers for the internal transcribed spacer (ITS) combined with next-generation sequencing has substantially improved our ability to profile fungal microbial diversity. Although the high sequence variability in the ITS region facilitates more accurate species identification, it also makes multiple sequence alignment and phylogenetic analysis unreliable across evolutionarily distant fungi because the sequences are hard to align accurately. To address this issue, we created ghost-tree, a bioinformatics tool that integrates sequence data from two genetic markers into a single phylogenetic tree that can be used for diversity analyses. Our approach starts with a "foundation" phylogeny based on one genetic marker whose sequences can be aligned across organisms spanning divergent taxonomic groups (e.g., fungal families). Then, "extension" phylogenies are built for more closely related organisms (e.g., fungal species or strains) using a second more rapidly evolving genetic marker. These smaller phylogenies are then grafted onto the foundation tree by mapping taxonomic names such that each corresponding foundation-tree tip would branch into its new "extension tree" child. We applied ghost-tree to graft fungal extension phylogenies derived from ITS sequences onto a foundation phylogeny derived from fungal 18S sequences. Our analysis of simulated and real fungal ITS data sets found that phylogenetic distances between fungal communities computed using ghost-tree phylogenies explained significantly more variance than non-phylogenetic distances. The phylogenetic metrics also improved our ability to distinguish small differences (effect sizes) between microbial communities, though results were similar to non-phylogenetic methods for larger effect sizes. The Silva/UNITE-based ghost tree presented here can be easily integrated into existing fungal analysis pipelines to enhance the resolution of fungal community differences and improve understanding of these communities in built environments. The ghost-tree software package can also be used to develop phylogenetic trees for other marker gene sets that afford different taxonomic resolution, or for bridging genome trees with amplicon trees. ghost-tree is pip-installable. All source code, documentation, and test code are available under the BSD license at https://github.com/JTFouquier/ghost-tree .

Mapping and detecting bark beetle-caused tree mortality in the western United States

NASA Astrophysics Data System (ADS)

Meddens, Arjan J. H.

Recently, insect outbreaks across North America have dramatically increased and the forest area affected by bark beetles is similar to that affected by fire. Remote sensing offers the potential to detect insect outbreaks with high accuracy. Chapter one involved detection of insect-caused tree mortality on the tree level for a 90km2 area in northcentral Colorado. Classes of interest included green trees, multiple stages of post-insect attack tree mortality including dead trees with red needles ("red-attack") and dead trees without needles ("gray-attack"), and non-forest. The results illustrated that classification of an image with a spatial resolution similar to the area of a tree crown outperformed that from finer and coarser resolution imagery for mapping tree mortality and non-forest classes. I also demonstrated that multispectral imagery could be used to separate multiple postoutbreak attack stages (i.e., red-attack and gray-attack) from other classes in the image. In Chapter 2, I compared and improved methods for detecting bark beetle-caused tree mortality using medium-resolution satellite data. I found that overall classification accuracy was similar between single-date and multi-date classification methods. I developed regression models to predict percent red attack within a 30-m grid cell and these models explained >75% of the variance using three Landsat spectral explanatory variables. Results of the final product showed that approximately 24% of the forest within the Landsat scene was comprised of tree mortality caused by bark beetles. In Chapter 3, I developed a gridded data set with 1-km2 resolution using aerial survey data and improved estimates of tree mortality across the western US and British Columbia. In the US, I also produced an upper estimate by forcing the mortality area to match that from high-resolution imagery in Idaho, Colorado, and New Mexico. Cumulative mortality area from all bark beetles was 5.46 Mha in British Columbia in 2001-2010 and 0.47-5.37 Mha (lower and upper estimate) in the western conterminous US during 1997-2010. Improved methods for detection and mapping of insect outbreak areas will lead to improved assessments of the effects of these forest disturbances on the economy, carbon cycle (and feedback to climate change), fuel loads, hydrology and forest ecology.

Effects of Pruning Teak

Treesearch

C. B. Briscoe; R. W. Nobles

1966-01-01

Teak plantations, 8 to 10 years old, were pruned to improve log quality. Of the pruned trees at the ends of rows and adjacent to road clearings, 40 percent produced adventitious branches; 28 percent of trees within the stand branched; only 6 percent of trees inside the stand but without immediate n eighbors re-branched. Trees pruned in August branched less than those...

Genomic and physiological approaches to advancing forest tree improvement

Treesearch

C. Dana Nelson; Kurt H. Johnsen

2008-01-01

Summary The recent completion of a draft sequence of the poplar (Populus trichocarpa Torr. & Gray ex Brayshaw) genome has advanced forest tree genetics to an unprecedented level. A "parts list" for a forest tree has been produced, opening up new opportunities for dissecting the interworkings of tree growth and development. In the relatively near future we...

Application of Advanced Technologies for Improvement of Hardwood Forests

Treesearch

Charles H. Michler

1999-01-01

Hardwood tree improvement in Indiana is on the brink of entering the 21st century with the recent initiation of the Hardwood Tree Improvement and Regeneration Center (HTIRC) at Purdue University. At a time when midwestern agriculture has enthusiastically embraced genetically modified insect and herbicide resistant corn and soybean crops and all the human genes are...

Effects of a copper-tolerant grass (Agrostis capillaris) on the ecosystem of a copper-contaminated arable soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boon, G.T.; Bouwman, L.A.; Bloem, J.

1998-10-01

To test how a dysfunctioning ecosystem of a severely metal-polluted soil responds to renewed plant growth, a pot experiment was conducted with soil from an experimental arable field with pH and copper gradients imposed 13 years ago. In this experiment, four pH/copper combinations from this field were either planted with a pH- and copper-resistant grass cultivar or remained fallow. During a 10-week period, the dynamics of the microbial activity and of the abundances of bacteria, protozoa. and nematodes were measured, as were the dynamics of several chemical soil parameters. After 13 years of copper, which had resulted in severely reducedmore » crop growth, no effects were observed on bacterial numbers, respiration, or protozoan numbers, but bacterial growth was strongly reduced in the low pH plots, and even more so in low pH plots enriched with copper. Of the organisms, only nematodes were negatively affected under conditions of high copper load at low pH. In these plots, numbers belonging to all feeding categories were strongly reduced. Planting of a copper-tolerant grass variety, Agrostis capillaris L. var. Parys Mountain, resulted within 10 weeks in faster bacterial growth and more protozoa and bacterivorous nematodes in comparison with fallow controls; these effects were markedly strongest in the acidic, copper-enriched soils. During incubation, fungivorous nematodes increased in all treatments, in fallow and in planted pots and in the pots with high-copper, low-pH soil. The results of this experiment suggest that introduction of plant growth is one of the major causes of increased biological activity in acidic contaminated soils. Planting such soils with metal-tolerant plant species can reestablish the necessary food base to support soil organism growth, and this can lead to numerous positive effects, reversing the loss of soil functions due to the high copper levels under acidic conditions.« less

Soil coverage evolution and wind erosion risk on summer crops under contrasting tillage systems

NASA Astrophysics Data System (ADS)

Mendez, Mariano J.; Buschiazzo, Daniel E.

2015-03-01

The effectiveness of wind erosion control by soil surface conditions and crop and weed canopy has been well studied in wind tunnel experiments. The aim of this study is to assess the combined effects of these variables under field conditions. Soil surface conditions, crop and weed coverage, plant residue, and non-erodible aggregates (NEA) were measured in the field between the fallow start and the growth period of sunflower (Helianthus annuus) and corn (Zea mays). Both crops were planted on a sandy-loam Entic Haplustoll with conventional-(CT), vertical-(VT) and no-till (NT) tillage systems. Wind erosion was estimated by means of the spreadsheet version the Revised Wind Erosion Equation and the soil coverage was measured each 15 days. Results indicated that wind erosion was mostly negligible in NT, exceeding the tolerable levels (estimated between 300 and 1400 kg ha-1 year-1 by Verheijen et al. (2009)) only in an year with high climatic erosivity. Wind erosion exceeded the tolerable levels in most cases in CT and VT, reaching values of 17,400 kg ha-1. Wind erosion was 2-10 times higher after planting of both crops than during fallows. During the fallows, the soil was mostly well covered with plant residues and NEA in CT and VT and with residues and weeds in NT. High wind erosion amounts occurring 30 days after planting in all tillage systems were produced by the destruction of coarse aggregates and the burying of plant residues during planting operations and rains. Differences in soil protection after planting were given by residues of previous crops and growing weeds. The growth of weeds 2-4 weeks after crop planting contributed to reduce wind erosion without impacting in crops yields. An accurate weeds management in semiarid lands can contribute significantly to control wind erosion. More field studies are needed in order to develop management strategies to reduce wind erosion.

Technology targeting for sustainable intensification of crop production in the Delta region of Bangladesh

NASA Astrophysics Data System (ADS)

Schulthess, U.; Krupnik, T. J.; Ahmed, Z. U.; McDonald, A. J.

2015-04-01

Remote sensing data are nowadays being acquired within short intervals and made available at a low cost or for free. This opens up opportunities for new remote sensing applications, such as the characterization of entire regions to identify most suitable areas for technology targeting. Increasing population growth and changing dietary habits in South Asia call for higher cereal production to ensure future food security. In the Delta area of Bangladesh, surface water is considered to be available in quantities large enough to support intensification by adding an irrigated dry season crop. Fuel-efficient, low lift axial flow pumps have shown to be suitable to carry water to fields that are within a buffer of four hundred meters of the rivers. However, information on how and where to target surface water irrigation efforts is currently lacking. We describe the opportunities and constraints encountered in developing a procedure to identify cropland for which axial flow pumps could be successfully deployed upon in a 43'000 km2 area. First, we isolated cropland and waterways using Landsat 5 and 7 scenes using image segmentation followed by classification with the random forest algorithm. Based on Landsat 7 and 8 scenes, we extracted maximum dry season enhanced vegetation index (EVI) values, which we classified into fallow, low-, and high-intensity cropland for the last three years. Last, we investigated the potential for surface water irrigation on fallow and low-intensity land by applying a cropping risk matrix to address the twin threats of soil and water salinity. Our analysis indicates that there are at least 20,000 ha of fallow land under the low-risk category, while more than 100,000 ha of low-intensity cropland can be brought into intensified production. This information will aid in technology targeting for the efficient deployment of surface water irrigation as a tool for intensification.

Intrinsic ruminal innervation in ruminants of different feeding types

PubMed Central

Münnich, Juliane; Gäbel, Gotthold; Pfannkuche, Helga

2008-01-01

According to their feeding habits, ruminants can be classified as grazers, concentrate selectors and those of intermediate type. The different feeding types are reflected in distinct anatomical properties of the forestomachs. The present study was designed to investigate whether the intrinsic innervation patterns of the rumen (the main part of the forestomach) differ between intermediate types and grazers. Myenteric plexus preparations from the rumen of goats (intermediate type), fallow deer (intermediate type), cattle (grazer) and sheep (grazer) were analysed by immunohistochemical detection of the following antigens: Hu-protein (HuC/D), choline acetyltransferase (ChAT), nitric oxide synthase (NOS), vasoactive intestinal peptide (VIP), neuropeptide Y (NPY), substance P (SP), calbindin (CALB) and somatostatin (SOM). Myenteric ganglia of cattle contained 73 ± 6 neurons per ganglion, whereas the ganglia of sheep were significantly smaller (45 ± 18 neurons per ganglion). The ganglion density of the myenteric plexus was highest in fallow deer (15 ± 3 ganglia per cm2) and lowest in cattle (6 ± 1 ganglia per cm2). All myenteric neurons were either ChAT or NOS positive. The proportion of NOS-positive neurons was significantly lower in sheep (29.5 ± 8.2% of all neurons) than in goats (44.2 ± 9.8%). In all species, additional analysis of the different neuropeptides revealed the following subpopulations in descending order of percentile appearance: ChAT/SP > NOS/VIP/NPY > ChAT/– > NOS/NPY. Expression of CALB was detected in a minority of the ChAT-positive neurons in all species. Somatostatin immunoreactive somata were found only in preparations obtained from fallow deer and sheep. These data suggest that the rumen of grazers is under stronger cholinergic control than the rumen of species belonging to the intermediate type, although most subpopulations of neurons are present in all species. However, whether the strong mixing patterns of low quality roughage during digestion are enabled by the prominent excitatory input of the rumen of grazers requires elucidation in further studies. PMID:18657258

Molecular detection of tick-borne bacteria and protozoa in cervids and wild boars from Portugal.

PubMed

Pereira, André; Parreira, Ricardo; Nunes, Mónica; Casadinho, Afonso; Vieira, Maria Luísa; Campino, Lenea; Maia, Carla

2016-05-10

Wildlife can act as reservoir of different tick-borne pathogens, such as bacteria, parasites and viruses. The aim of the present study was to assess the presence of tick-borne bacteria and protozoa with veterinary and zoonotic importance in cervids and wild boars from the Centre and South of Portugal. One hundred and forty one blood samples from free-ranging ungulates including 73 red deer (Cervus elaphus), 65 wild boars (Sus scrofa) and three fallow deer (Dama dama) were tested for the presence of Anaplasma marginale/A. ovis, A. phagocytophilum, Anaplasma/Ehrlichia spp., Babesia/Theileria spp., Borrelia burgdorferi (sensu lato) (s.l.), and Rickettsia spp. DNA by PCR. Anaplasma spp. DNA was detected in 33 (43.4 %) cervids (31 red deer and two fallow deer) and in two (3.1 %) wild boars while Theileria spp. were found in 34 (44.7 %) cervids (32 red deer and two fallow deer) and in three (4.6 %) wild boar blood samples. Sequence analysis of msp4 sequences identified A. marginale, A. ovis, while the analysis of rDNA sequence data disclosed the presence of A. platys and A. phagocytophilum and T. capreoli and Theileria sp. OT3. Anaplasma spp./Theileria spp. mixed infections were found in 17 cervids (22.4 %) and in two wild boars (3.1 %). All samples were negative for Babesia sp., B. burgdorferi (s.l.), Ehrlichia sp. or Rickettsia sp. This is the first detection of Anaplasma marginale, A. ovis, A. phagocytophilum, A. platys, Theileria capreoli and Theileria sp. OT3 in cervids and wild boars from Portugal. Further studies concerning the potential pathogenicity of the different species of  Anaplasma and Theileria infecting wild ungulates, the identification of their vector range, and their putative infectivity to domestic livestock and humans should be undertaken.

DIAGNOSIS AND THERAPY OF LIVER FLUKE (FASCIOLOIDES MAGNA) INFECTION IN FALLOW DEER (DAMA DAMA) IN SERBIA.

PubMed

Trailović, Saša M; Marinković, Darko; Kulišić, Zoran

2016-04-28

Giant liver fluke ( Fascioloides magna ) infection is an important health problem of cervids in southeastern Europe. We measured the prevalence and intensity of infection with F. magna in a fenced area near the Danube River in the South Bačka District of Serbia. Parasitologic, pathomorphologic, and histopathologic examinations were conducted from November 2007 to February 2008, beginning with a population of 127 adult fallow deer ( Dama dama ). After a positive diagnosis, therapy with triclabendazole-medicated corn was applied. Deer were treated at four baiting stations, using medicated feed providing triclabendazole at an estimated dose of 10-14 mg/kg of body weight per deer. Treatment lasted for 7 d in early February 2008 and an additional 7 d 2 wk later. For the complete success of pharmacotherapy it was necessary to prevent any contact of deer with the snail intermediate host ( Galba truncatula ). Intervention in the habitat, removing grass and low vegetation, and draining ponds reduces the possibility of contact. Six months after the treatment, livers of hunted deer were reddish, with fibrous tracks; pigmentation and cysts in the parenchyma were surrounded by a fibrous capsule and their fecal samples contained no eggs of F. magna . Over the following years, livers of hunted deer were negative, and the last control cull in March 2015 confirmed complete absence of infection. We reconfirmed the presence of giant liver flukes in fallow deer in Serbia, apparently the result of natural spread across the Danube from Hungary and Croatia. We also report that the treatment of deer with triclabendazole-medicated corn is an effective method for administration of therapeutic doses of drug in semicaptive deer. Interventions in the environment are necessary to prevent recontact of deer with habitats used by the snail intermediate host, and enable the success of the therapy.

Evaporation over a Heterogeneous Mixed Savanna-Agricultural Catchment using a Distributed Wireless Sensor Network

NASA Astrophysics Data System (ADS)

Ceperley, N. C.; Mande, T.; Barrenetxea, G.; Vetterli, M.; Yacouba, H.; Repetti, A.; Parlange, M. B.

2010-12-01

Small scale rain fed agriculture is the primary livelihood for a large part of the population of Burkina Faso. Regional climate change means that this population is becoming increasingly vulnerable. Additionally, as natural savanna is converted for agriculture, hydrological systems are observed to become less stable as infiltration is decreased and rapid runoff is increased to the detriment of crop productivity, downstream populations and local water sources. The majority of the Singou River Basin, located in South East Burkina Faso is managed by hunting reserves, geared to maintaining high populations of wild game; however, residents surrounding the protected areas have been forced to intensify agriculture that has resulted in soil degradation as well as increases in the frequency and severity of flooding and droughts. Agroforestry, or planting trees in cultivated fields, has been proposed as a solution to help buffer these negative consequences, however the specific hydrologic behavior of the watershed land cover is unknown. We have installed a distributed sensor network of 17 Sensorscope wireless meteorological stations. These stations are dispersed across cultivated rice and millet fields, natural savanna, fallow fields, and around agroforestry fields. Sensorscope routes data through the network of stations to be delivered by a GPRS connection to a main server. This multi hop network allows data to be gathered over a large area and quickly adapts to changes in station performance. Data are available in real time via a website that can be accessed by a mobile phone. The stations are powered autonomously by small photovoltaic panels. This deployment is the first time that these meteorological stations have been used on the African continent. Initial calibration with measures from 2 eddy covariance stations allows us to calculate the energy balance at each of the Sensorscope stations. Thus, we can observe variation in evaporation over the various land cover in the watershed. This research will both contribute to scientific understanding of West African vegetation and inform local reforestation and agricultural management. Concurrent to this scientific research, the community is improving natural resource management efforts including reforestation, a botanical garden and environmental education. Our hope is that the results of our evaporation modeling will inform local farmers and thus help improve their adaption to changing weather patterns and land cover.

Forest tree improvement at Michigan State University: Past, present, and future

Treesearch

Paul Bloese

2010-01-01

The Department of Forestry at Michigan State University has engaged in forest tree improvement for more than 50 years. This paper presents a brief historical perspective on past research, the status of current projects, and outlines plans for the future.

Water-Tree Modelling and Detection for Underground Cables

NASA Astrophysics Data System (ADS)

Chen, Qi

In recent years, aging infrastructure has become a major concern for the power industry. Since its inception in early 20th century, the electrical system has been the cornerstone of an industrial society. Stable and uninterrupted delivery of electrical power is now a base necessity for the modern world. As the times march-on, however, the electrical infrastructure ages and there is the inevitable need to renew and replace the existing system. Unfortunately, due to time and financial constraints, many electrical systems today are forced to operate beyond their original design and power utilities must find ways to prolong the lifespan of older equipment. Thus, the concept of preventative maintenance arises. Preventative maintenance allows old equipment to operate longer and at better efficiency, but in order to implement preventative maintenance, the operators must know minute details of the electrical system, especially some of the harder to assess issues such water-tree. Water-tree induced insulation degradation is a problem typically associated with older cable systems. It is a very high impedance phenomenon and it is difficult to detect using traditional methods such as Tan-Delta or Partial Discharge. The proposed dissertation studies water-tree development in underground cables, potential methods to detect water-tree location and water-tree severity estimation. The dissertation begins by developing mathematical models of water-tree using finite element analysis. The method focuses on surface-originated vented tree, the most prominent type of water-tree fault in the field. Using the standard operation parameters of North American electrical systems, the water-tree boundary conditions are defined. By applying finite element analysis technique, the complex water-tree structure is broken down to homogeneous components. The result is a generalized representation of water-tree capacitance at different stages of development. The result from the finite element analysis is used to model water-tree in large system. Both empirical measurements and the mathematical model show that the impedance of early-stage water-tree is extremely large. As the result, traditional detection methods such Tan-Delta or Partial Discharge are not effective due to the excessively high accuracy requirement. A high-frequency pulse detection method is developed instead. The water-tree impedance is capacitive in nature and it can be reduced to manageable level by high-frequency inputs. The method is able to determine the location of early-stage water-tree in long-distance cables using economically feasible equipment. A pattern recognition method is developed to estimate the severity of water-tree using its pulse response from the high-frequency test method. The early-warning system for water-tree appearance is a tool developed to assist the practical implementation of the high-frequency pulse detection method. Although the equipment used by the detection method is economically feasible, it is still a specialized test and not designed for constant monitoring of the system. The test also place heavy stress on the cable and it is most effective when the cable is taken offline. As the result, utilities need a method to estimate the likelihood of water-tree presence before subjecting the cable to the specialized test. The early-warning system takes advantage of naturally occurring high-frequency events in the system and uses a deviation-comparison method to estimate the probability of water-tree presence on the cable. If the likelihood is high, then the utility can use the high-frequency pulse detection method to obtain accurate results. Specific pulse response patterns can be used to calculate the capacitance of water-tree. The calculated result, however, is subjected to margins of error due to limitations from the real system. There are both long-term and short-term methods to improve the accuracy. Computation algorithm improvement allows immediate improvement on accuracy of the capacitance estimation. The probability distribution of the calculation solution showed that improvements in waveform time-step measurement allow fundamental improves to the overall result.

Applying the RUSLE and the USLE-M on hillslopes where runoff production during an erosion event is spatially variable

NASA Astrophysics Data System (ADS)

Kinnell, P. I. A.

2014-11-01

The assumption that runoff is produced uniformly over the eroding area underlies the traditional use of Universal Soil Loss Equation (USLE) and the revised version of it, the RUSLE. However, although the application of the USLE/RUSLE to segments on one dimensional hillslopes and cells on two-dimensional hillslopes is based on the assumption that each segment or cell is spatially uniform, factors such as soil infiltration, and hence runoff production, may vary spatially between segments or cells. Results from equations that focus on taking account of spatially variable runoff when applying the USLE/RUSLE and the USLE-M, the modification of the USLE/RUSLE that replaces the EI30 index by the product of EI30 and the runoff ratio, in hillslopes during erosion events where runoff is not produced uniformly were compared on a hypothetical a 300 m long one-dimensional hillslope with a spatially uniform gradient. Results were produced for situations where all the hillslope was tilled bare fallow and where half of the hillslope was cropped with corn and half was tilled bare fallow. Given that the erosive stress within a segment or cell depends on the volume of surface water flowing through the segment or cell, soil loss can be expected to increase not only with distance from the point where runoff begins but also directly with runoff when it varies about the average for the slope containing the segment or cell. The latter effect was achieved when soil loss was predicted using the USLE-M but not when the USLE/RUSLE slope length factor for a segment using an effective upslope length that varies with the ratio of the upslope runoff coefficient and the runoff coefficient for the slope to the bottom of the segment or cell was used. The USLE-M also predicted deposition to occur in a segment containing corn when an area with tilled bare fallow soil existed immediately upslope of it because the USLE-M models erosion on runoff and soil loss plots as a transport limited system. In a comparison of the USLE-M and RUSLE2, the form of the RUSLE that uses a daily time step in modeling rainfall erosion on one-dimensional hillslopes in the USA, on a 300 m long 9% hillslope where management changed from bare fallow to corn midway down the slope, the USLE-M predicted greater deposition in the bottom segment than predicted by RUSLE2. In addition, the USLE-M approach predicted that the deposition that occurred when the slope gradient changed from 9% to 4.5% midway down the slope was much greater than the amount predicted using RUSLE2.

Crown-Level Tree Species Classification Using Integrated Airborne Hyperspectral and LIDAR Remote Sensing Data

NASA Astrophysics Data System (ADS)

Wang, Z.; Wu, J.; Wang, Y.; Kong, X.; Bao, H.; Ni, Y.; Ma, L.; Jin, J.

2018-05-01

Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR) and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI) hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1) A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM) derived from LiDAR data; 2) The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3) Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4) The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90) performed better than LiDAR-metrics method (OA = 79.86 %, Kc = 0.81) and spectral-metircs method (OA = 71.26, Kc = 0.69) in terms of classification accuracy, which indicated that the advanced method of data processing and sensitive feature selection are critical for improving the accuracy of crown-level tree species classification.

Mines Systems Safety Improvement Using an Integrated Event Tree and Fault Tree Analysis

NASA Astrophysics Data System (ADS)

Kumar, Ranjan; Ghosh, Achyuta Krishna

2017-04-01

Mines systems such as ventilation system, strata support system, flame proof safety equipment, are exposed to dynamic operational conditions such as stress, humidity, dust, temperature, etc., and safety improvement of such systems can be done preferably during planning and design stage. However, the existing safety analysis methods do not handle the accident initiation and progression of mine systems explicitly. To bridge this gap, this paper presents an integrated Event Tree (ET) and Fault Tree (FT) approach for safety analysis and improvement of mine systems design. This approach includes ET and FT modeling coupled with redundancy allocation technique. In this method, a concept of top hazard probability is introduced for identifying system failure probability and redundancy is allocated to the system either at component or system level. A case study on mine methane explosion safety with two initiating events is performed. The results demonstrate that the presented method can reveal the accident scenarios and improve the safety of complex mine systems simultaneously.

A Technical Guide to Urban Community Forestry: Urban and Community Forestry: Improving Our Quality of Life

Treesearch

USDA Forest Service

1993-01-01

Trees growing within cities and towns form a forest-an urban forest. But urban trees require special attention, because they are expected to exist within the urban environment. With its infrastructure of streets, sidewalks, curbs, buried utilities, overhead power lines and buildings, the urban environment places tremendous stresses on trees. With proper care, trees...

An improved tree height measurement technique tested on mature southern pines

Treesearch

Don C. Bragg

2008-01-01

Virtually all techniques for tree height determination follow one of two principles: similar triangles or the tangent method. Most people apply the latter approach, which uses the tangents of the angles to the top and bottom and a true horizontal distance to the subject tree. However, few adjust this method for ground slope, tree lean, crown shape, and crown...

Tentative guides for the selection of plus trees and superior stands in Douglas-fir.

Treesearch

Leo A. Isaac

1955-01-01

Interest among foresters in forest tree improvement has increased rapidly in recent years. Geneticists have learned that some individual trees greatly excel their neighbors in desirable characteristics, and that some entire stands are superior to other stands of the same species in a general locality. They have learned that many of the desirable tree characteristics...

Development of Longleaf Pine Seedlings Under Parent Trees

Treesearch

William D. Boyer

1963-01-01

In southwest Alabama, unburned seedlings under overstories ranging up to 90 square feet of basal area per acre survived as well as those with no tree competition. After 7 years, milacre stocking averaged 99 percent and survival 72 percent. Growth, but not survival, improved with distance from parent trees. Seedlings under tree crowns had less brown spot than those in...

Research frontiers for improving our understanding of drought‐induced tree and forest mortality

USGS Publications Warehouse

Hartmann, Henrik; Moura, Catarina; Anderegg, William R. L.; Ruehr, Nadine; Salmon, Yann; Allen, Craig D.; Arndt, Stefan K.; Breshears, David D.; Davi, Hendrik; Galbraith, David; Ruthrof, Katinka X.; Wunder, Jan; Adams, Henry D.; Bloemen, Jasper; Cailleret, Maxime; Cobb, Richard; Gessler, Arthur; Grams, Thorsten E. E.; Jansen, Steven; Kautz, Markus; Lloret, Francisco; O’Brien, Michael

2018-01-01

Accumulating evidence highlights increased mortality risks for trees during severe drought, particularly under warmer temperatures and increasing vapour pressure deficit (VPD). Resulting forest die‐off events have severe consequences for ecosystem services, biophysical and biogeochemical land–atmosphere processes. Despite advances in monitoring, modelling and experimental studies of the causes and consequences of tree death from individual tree to ecosystem and global scale, a general mechanistic understanding and realistic predictions of drought mortality under future climate conditions are still lacking. We update a global tree mortality map and present a roadmap to a more holistic understanding of forest mortality across scales. We highlight priority research frontiers that promote: (1) new avenues for research on key tree ecophysiological responses to drought; (2) scaling from the tree/plot level to the ecosystem and region; (3) improvements of mortality risk predictions based on both empirical and mechanistic insights; and (4) a global monitoring network of forest mortality. In light of recent and anticipated large forest die‐off events such a research agenda is timely and needed to achieve scientific understanding for realistic predictions of drought‐induced tree mortality. The implementation of a sustainable network will require support by stakeholders and political authorities at the international level.

Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice

PubMed Central

Aberer, Andre J.; Krompass, Denis; Stamatakis, Alexandros

2013-01-01

Abstract The presence of rogue taxa (rogues) in a set of trees can frequently have a negative impact on the results of a bootstrap analysis (e.g., the overall support in consensus trees). We introduce an efficient graph-based algorithm for rogue taxon identification as well as an interactive webservice implementing this algorithm. Compared with our previous method, the new algorithm is up to 4 orders of magnitude faster, while returning qualitatively identical results. Because of this significant improvement in scalability, the new algorithm can now identify substantially more complex and compute-intensive rogue taxon constellations. On a large and diverse collection of real-world data sets, we show that our method yields better supported reduced/pruned consensus trees than any competing rogue taxon identification method. Using the parallel version of our open-source code, we successfully identified rogue taxa in a set of 100 trees with 116 334 taxa each. For simulated data sets, we show that when removing/pruning rogue taxa with our method from a tree set, we consistently obtain bootstrap consensus trees as well as maximum-likelihood trees that are topologically closer to the respective true trees. PMID:22962004

Pruning rogue taxa improves phylogenetic accuracy: an efficient algorithm and webservice.

PubMed

Aberer, Andre J; Krompass, Denis; Stamatakis, Alexandros

2013-01-01

The presence of rogue taxa (rogues) in a set of trees can frequently have a negative impact on the results of a bootstrap analysis (e.g., the overall support in consensus trees). We introduce an efficient graph-based algorithm for rogue taxon identification as well as an interactive webservice implementing this algorithm. Compared with our previous method, the new algorithm is up to 4 orders of magnitude faster, while returning qualitatively identical results. Because of this significant improvement in scalability, the new algorithm can now identify substantially more complex and compute-intensive rogue taxon constellations. On a large and diverse collection of real-world data sets, we show that our method yields better supported reduced/pruned consensus trees than any competing rogue taxon identification method. Using the parallel version of our open-source code, we successfully identified rogue taxa in a set of 100 trees with 116 334 taxa each. For simulated data sets, we show that when removing/pruning rogue taxa with our method from a tree set, we consistently obtain bootstrap consensus trees as well as maximum-likelihood trees that are topologically closer to the respective true trees.

Learning accurate very fast decision trees from uncertain data streams

NASA Astrophysics Data System (ADS)

Liang, Chunquan; Zhang, Yang; Shi, Peng; Hu, Zhengguo

2015-12-01

Most existing works on data stream classification assume the streaming data is precise and definite. Such assumption, however, does not always hold in practice, since data uncertainty is ubiquitous in data stream applications due to imprecise measurement, missing values, privacy protection, etc. The goal of this paper is to learn accurate decision tree models from uncertain data streams for classification analysis. On the basis of very fast decision tree (VFDT) algorithms, we proposed an algorithm for constructing an uncertain VFDT tree with classifiers at tree leaves (uVFDTc). The uVFDTc algorithm can exploit uncertain information effectively and efficiently in both the learning and the classification phases. In the learning phase, it uses Hoeffding bound theory to learn from uncertain data streams and yield fast and reasonable decision trees. In the classification phase, at tree leaves it uses uncertain naive Bayes (UNB) classifiers to improve the classification performance. Experimental results on both synthetic and real-life datasets demonstrate the strong ability of uVFDTc to classify uncertain data streams. The use of UNB at tree leaves has improved the performance of uVFDTc, especially the any-time property, the benefit of exploiting uncertain information, and the robustness against uncertainty.

Use ammate in notches for deadening trees only during the growing season

Treesearch

W. E. McQuilkin

1955-01-01

One of the commonly recommended methods for deadening weed and cull trees for timber-stand improvement is by use of ammate crystals in ax notches or cups spaced about 6 inches apart around the base of the tree.

Tree Colors: Color Schemes for Tree-Structured Data.

PubMed

Tennekes, Martijn; de Jonge, Edwin

2014-12-01

We present a method to map tree structures to colors from the Hue-Chroma-Luminance color model, which is known for its well balanced perceptual properties. The Tree Colors method can be tuned with several parameters, whose effect on the resulting color schemes is discussed in detail. We provide a free and open source implementation with sensible parameter defaults. Categorical data are very common in statistical graphics, and often these categories form a classification tree. We evaluate applying Tree Colors to tree structured data with a survey on a large group of users from a national statistical institute. Our user study suggests that Tree Colors are useful, not only for improving node-link diagrams, but also for unveiling tree structure in non-hierarchical visualizations.

Implications of Liebig’s law of the minimum for tree-ring reconstructions of climate

NASA Astrophysics Data System (ADS)

Stine, A. R.; Huybers, P.

2017-11-01

A basic principle of ecology, known as Liebig’s Law of the Minimum, is that plant growth reflects the strongest limiting environmental factor. This principle implies that a limiting environmental factor can be inferred from historical growth and, in dendrochronology, such reconstruction is generally achieved by averaging collections of standardized tree-ring records. Averaging is optimal if growth reflects a single limiting factor and noise but not if growth also reflects locally variable stresses that intermittently limit growth. In this study a collection of Arctic tree ring records is shown to follow scaling relationships that are inconsistent with the signal-plus-noise model of tree growth but consistent with Liebig’s Law acting at the local level. Also consistent with law-of-the-minimum behavior is that reconstructions based on the least-stressed trees in a given year better-follow variations in temperature than typical approaches where all tree-ring records are averaged. Improvements in reconstruction skill occur across all frequencies, with the greatest increase at the lowest frequencies. More comprehensive statistical-ecological models of tree growth may offer further improvement in reconstruction skill.

Characterization of LANDSAT-4 TM and MSS Image Quality for Interpretation of Agricultural and Forest Resources

NASA Technical Reports Server (NTRS)

Degloria, S. D.; Colwell, R. N.

1984-01-01

Systematic analysis of both image and numeric data shows that the overall spectral, spatial, and radiometric quality of the TM data are excellent. Spectral variations in fallow fields are due to the vaiability in soil moisture and surface roughness resulting from the various stages of field preparation for small grains production. Spectrally, the addition of the first TM short wave infrared band (Band 5) significantly enhanced ability to discriminate different crop types. Bands 1, 5, and 6 contain saturated pixels due to high albedo effects, low moisture conditions, and high radiant temperatures of granite and dry, bare soil on south facing slopes, respectively. Spatially, the two fold decrease in interpixel distance and four fold decrease in area per pixel between the TM and MSS allow for improved discrimination of small fields, boundary conditions, road and stream networks in rough terrain, and small forest clearings resulting from various forest management practices.

Sustainability appraisal of shifting cultivation in the Chittagong Hill Tracts of Bangladesh.

PubMed

Borggaard, Ole K; Gafur, Abdul; Petersen, Leif

2003-03-01

An integrated socioeconomic and erosion study on the sustainability of traditional shifting cultivation (Jhum) carried out in 1998 and 1999 in the Chittagong Hill Tracts (CHT) of Bangladesh showed the system to be nonsustainable under the current conditions with fallow periods of only 3-5 years and lack of land rights. An estimated input (mainly labor) of USD 380 ha(-1) yr(-1) results in only a total output of USD 360 ha(-1) yr(-1) and Jhum cultivated areas suffer severe loss of soil and valuable plant nutrients along with runoff during the rainy season. To compensate these losses by commercial fertilizers will cost nearly USD 2 million yr(-1) for CHT. To ensure long-term productivity of the soils, Jhum should therefore be adjusted to a tolerable level and farmers should be given rights and title to the land to motivate them to switch to improved, settled farming systems.

Understanding the Scalability of Bayesian Network Inference Using Clique Tree Growth Curves

NASA Technical Reports Server (NTRS)

Mengshoel, Ole J.

2010-01-01

One of the main approaches to performing computation in Bayesian networks (BNs) is clique tree clustering and propagation. The clique tree approach consists of propagation in a clique tree compiled from a Bayesian network, and while it was introduced in the 1980s, there is still a lack of understanding of how clique tree computation time depends on variations in BN size and structure. In this article, we improve this understanding by developing an approach to characterizing clique tree growth as a function of parameters that can be computed in polynomial time from BNs, specifically: (i) the ratio of the number of a BN s non-root nodes to the number of root nodes, and (ii) the expected number of moral edges in their moral graphs. Analytically, we partition the set of cliques in a clique tree into different sets, and introduce a growth curve for the total size of each set. For the special case of bipartite BNs, there are two sets and two growth curves, a mixed clique growth curve and a root clique growth curve. In experiments, where random bipartite BNs generated using the BPART algorithm are studied, we systematically increase the out-degree of the root nodes in bipartite Bayesian networks, by increasing the number of leaf nodes. Surprisingly, root clique growth is well-approximated by Gompertz growth curves, an S-shaped family of curves that has previously been used to describe growth processes in biology, medicine, and neuroscience. We believe that this research improves the understanding of the scaling behavior of clique tree clustering for a certain class of Bayesian networks; presents an aid for trade-off studies of clique tree clustering using growth curves; and ultimately provides a foundation for benchmarking and developing improved BN inference and machine learning algorithms.

Contribution of glomalin to dissolve organic carbon under different land uses and seasonality in dry tropics.

PubMed

Singh, Ashutosh Kumar; Rai, Apurva; Pandey, Vivek; Singh, Nandita

2017-05-01

Glomalin related soil protein (GRSP) is a hydrophobic glycoprotein that is significant for soil organic carbon (SOC) persistence and sequestration, owing to its large contribution to SOC pool and long turnover time. However, the contribution of GRSP to dissolve OC (DOC) leach from soil is not yet comprehensively explored, though it could have implication in understanding SOC dynamics. We, therefore, aim to measure the contribution of GRSP to DOC, in a range of land uses and climatic seasons in the dry tropical ecosystem. Our results demonstrated that a significant proportion of GRSP (water soluble GRSP; WS-GRSP) leached with DOC (7.9-21.9 mg kg -1 ), which accounts for 0.2-0.23% of soils total GRSP (T-GRSP). Forest exhibited significantly higher WS-GRSP and DOC leaching than fallow and agriculture. WS-GRSP and DOC accumulations were higher in the dry season (summer and winter) than in rainy. The extent of seasonal variations was higher in forest than in other two land uses, indicating the role of vegetation and biological activity in soil dissolve organic matter (DOM) dynamics. The regression analysis among WS-GRSP, T-GRSP, DOC and SOC prove that the accumulations and leaching of GRSP and other soil OM (SOM) depend on similar factors. The ratio of WS-GRSP-C to DOC was higher in agriculture soil than in forest and fallow, likely a consequence of altered soil chemistry, and organic matter quantity and quality due to soil management practices. Multivariate analysis reflects a strong linkage among GRSP and SOC storage and leaching, soil nutrients (nitrogen and phosphorus) and other important soil properties (pH and bulk density), suggesting that improving GRSP and other SOM status is an urgent need for the both SOC sequestration and soil health in dry tropical agro-ecosystems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Simulating soil organic carbon responses to cropping intensity, tillage, and climate change in Pacific Northwest dryland

USDA-ARS?s Scientific Manuscript database

Managing dryland cropping systems to increase soil organic C (SOC) under changing climate is challenging after decades of winter wheat (Triticum aestivum L.)-fallow and moldboard plow tillage (W-F/MP). The objective was to use CQESTR, a process-based C model, and SOC data collected in 2004, 2008, an...

CQESTR simulated response of soil organic carbon to management, yield, and climate change in northern Great Plains region

USDA-ARS?s Scientific Manuscript database

Traditional dryland crop management includes fallow and intensive tillage, which have reduced soil organic carbon (SOC) over the past century raising concerns regarding soil health and sustainability. The objectives of this study were to: 1) use CQESTR, a process-based C model, to simulate SOC dynam...

Techniques for Cynodon dactylon (L.) Pers. control suitable for use in fallow organic transition in the southeastern U.S. coastal plain

USDA-ARS?s Scientific Manuscript database

Cynodon dactylon (L.) Pers. (common bermudagrass) is a troublesome perennial grass common in the southeastern U. S. and extremely difficult to control in organic crop production systems. Research trials in a site heavily infested with C. dactylon were conducted from 2008 to 2010 to evaluate systems...

Careers in Midlife and Beyond: A Fallow Field in Need of Sustenance.

ERIC Educational Resources Information Center

Greller, Martin M.; Stroh, Linda K.

1995-01-01

Increased turbulence in the workplace is affecting the careers of an aging workforce: changed skill needs, relations with employers and coworkers, and attitudes toward retirement and aging. Study of careers beyond midlife should bear in mind that retirement is an individual decision and the aging process is unique to the individual. (SK)

Residue management increases fallow water conservation and yield deficit irrigated crops grown in rotation with wheat

USDA-ARS?s Scientific Manuscript database

No-tillage (NT) residue management provides cover to increase precipitation capture compared with disk tillage (DT) or in the absence of a cover crop. Therefore, NT has the potential to reduce irrigation withdrawals from the declining Ogallala Aquifer. In a 4-year study, we quantified DT and NT effe...

Challenges in identifying and determining the impacts of infection with pestiviruses on the herd health of free ranging cervid populations

USDA-ARS?s Scientific Manuscript database

Although most commonly associated with the infection of domestic livestock, the replication of pestiviruses, in particular bovine viral diarrhea virus (BVDV), occurs in a wide range of free ranging cervids including white-tailed deer, mule deer, fallow deer, elk, red deer, roe deer, eland and moused...

Modeling Responses of Dryland Spring Triticale, Proso Millet and Foxtail Millet to Initial Soil Water in the High Plains

USDA-ARS?s Scientific Manuscript database

Dryland farming strategies in the High Plains must make efficient use of limited and variable precipitation and stored water in the soil profile for stable and sustainable farm productivity. Current research efforts focus on replacing summer fallow in the region with more profitable and environmenta...

Dryland pea production and water use in responses to tillage, crop rotation, and weed management practice

USDA-ARS?s Scientific Manuscript database

Pea has been used to replace fallow and sustain dryland crop yields in arid and semiarid regions, but information to optimize its management is required. We evaluated pea growth, yield, and water use in response to tillage, crop rotation, and weed management practice from 2005 to 2010 in the norther...

Feral rye (Secale cereal) control in winter canola in the Pacific Northwest

USDA-ARS?s Scientific Manuscript database

In the Pacific Northwest (PNW) feral rye is a predominant winter annual grass weed in the low-rainfall region where a winter wheat-tillage fallow rotation has been practiced for more than 130 yrs and winter canola has been introduced recently. A 3-yr study was conducted in Washington to determine th...

Population, conservation, and land use change in Honduras

Treesearch

Max J. Pfeffer; John W. Schlelhas; Stephen D. DeGloria; Jorge Gomez

2005-01-01

This paper examines the role of population density on land use allocation and change. We are especially interested in the management of fallow areas that have come under increasing pressure given restrictions imposed by the creation of protected areas like national parks. It is argued that these restrictions to reduce deforestation create a relative scarcity of land,...

Seasonal change of WEPP erodibility parameters on a fallow plot

Treesearch

D. K. McCool; S. Dun; J. Q. Wu; W. J. Elliot

2011-01-01

In cold regions, frozen soil has a significant influence on runoff and water erosion. Frozen soil can reduce infiltration capacity, and the freeze-thaw processes degrade soil cohesive strength and increase soil erodibility. In the Inland Pacific Northwest of the USA, major erosion events typically occur during winter from low-intensity rain, snowmelt, or both as frozen...

Soil pasteurization effects on the persistence of E. coli O157:H7 and Salmonella spp. in fallow and spinach-grown soil

USDA-ARS?s Scientific Manuscript database

The survival and persistence of E. coli and Salmonella in soils is dependent on many factors, including the presence of indigenous microbiota (fungi, bacteria, nematode) and nutrient sources, such as root exudates from growing plants. Soil pasteurization practices, like fumigation, are targeted to ...

Alley Cropping: An Alternative to Slash and Burn in the Slopelands of the Mizo Hills

ERIC Educational Resources Information Center

Sailo, Andrew

2011-01-01

Population pressure in the Mizo Hills, a small mountainous region in northeast India, has shortened fallow periods of slash-and-burn (S&B) plots substantially, making its practice unsustainable. Conventional farming and modern technology cannot be applied in this remote tropical region due to its topography; hence, most farmers continue…

The use of organic soil amendments for winter wheat production in Kentucky

USDA-ARS?s Scientific Manuscript database

Most animal manures are land-applied in the fall and spring after crops have been harvested or prior to planting. Surface application of manures in the fall have more potential for nitrogen (N) loss when applied to fallow land compared to land cropped to winter wheat. This study was conducted to d...

Soil water in small drainages farmed with no-tillage and inversion tillage in northeastern Oregon

USDA-ARS?s Scientific Manuscript database

Crop productivity in the semi-arid inland Pacific Northwest (IPNW), USA is dependent on the capture and storage of precipitation as soil water. To maximize soil water in this region, the conventional crop strategy is a two year crop – fallow system in which winter wheat (W, Triticum aestivum L.) is ...

3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles

PubMed Central

2015-01-01

Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree components with precision has been constrained by technological and logistical limitations and cost. Traditional methods of forest biometrics provide only partial measurements and are labor intensive. Active remote technologies such as LiDAR operated from airborne platforms provide only partial crown reconstructions. The use of terrestrial LiDAR is laborious, has portability limitations and high cost. In this work we capitalized on recent improvements in the capabilities and availability of small unmanned aerial vehicles (UAVs), light and inexpensive cameras, and developed an affordable method for obtaining precise and comprehensive 3D models of trees and small groups of trees. The method employs slow-moving UAVs that acquire images along predefined trajectories near and around targeted trees, and computer vision-based approaches that process the images to obtain detailed tree reconstructions. After we confirmed the potential of the methodology via simulation we evaluated several UAV platforms, strategies for image acquisition, and image processing algorithms. We present an original, step-by-step workflow which utilizes open source programs and original software. We anticipate that future development and applications of our method will improve our understanding of forest self-organization emerging from the competition among trees, and will lead to a refined generation of individual-tree-based forest models. PMID:26393926

3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles.

PubMed

Gatziolis, Demetrios; Lienard, Jean F; Vogs, Andre; Strigul, Nikolay S

2015-01-01

Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree components with precision has been constrained by technological and logistical limitations and cost. Traditional methods of forest biometrics provide only partial measurements and are labor intensive. Active remote technologies such as LiDAR operated from airborne platforms provide only partial crown reconstructions. The use of terrestrial LiDAR is laborious, has portability limitations and high cost. In this work we capitalized on recent improvements in the capabilities and availability of small unmanned aerial vehicles (UAVs), light and inexpensive cameras, and developed an affordable method for obtaining precise and comprehensive 3D models of trees and small groups of trees. The method employs slow-moving UAVs that acquire images along predefined trajectories near and around targeted trees, and computer vision-based approaches that process the images to obtain detailed tree reconstructions. After we confirmed the potential of the methodology via simulation we evaluated several UAV platforms, strategies for image acquisition, and image processing algorithms. We present an original, step-by-step workflow which utilizes open source programs and original software. We anticipate that future development and applications of our method will improve our understanding of forest self-organization emerging from the competition among trees, and will lead to a refined generation of individual-tree-based forest models.

Improving quantum state transfer efficiency and entanglement distribution in binary tree spin network through incomplete collapsing measurements

NASA Astrophysics Data System (ADS)

Behzadi, Naghi; Ahansaz, Bahram

2018-04-01

We propose a mechanism for quantum state transfer (QST) over a binary tree spin network on the basis of incomplete collapsing measurements. To this aim, we perform initially a weak measurement (WM) on the central qubit of the binary tree network where the state of our concern has been prepared on that qubit. After the time evolution of the whole system, a quantum measurement reversal (QMR) is performed on a chosen target qubit. By taking optimal value for the strength of QMR, it is shown that the QST quality from the sending qubit to any typical target qubit on the binary tree is considerably improved in terms of the WM strength. Also, we show that how high-quality entanglement distribution over the binary tree network is achievable by using this approach.

Try Fault Tree Analysis, a Step-by-Step Way to Improve Organization Development.

ERIC Educational Resources Information Center

Spitzer, Dean

1980-01-01

Fault Tree Analysis, a systems safety engineering technology used to analyze organizational systems, is described. Explains the use of logic gates to represent the relationship between failure events, qualitative analysis, quantitative analysis, and effective use of Fault Tree Analysis. (CT)

How to reduce injuries to residual trees during stand management activities.

Treesearch

Paul E. Aho; Gary Fiddler; Gregory M. Filip

1983-01-01

Losses of trees and tree volume that result from decay initiated by mechanical injuries during stand management activities in the western United States are substantial. They can be reduced through improved logging methods and careful planning of other forest management activities.

Evaluating and improving rootstocks for apple cultivation

USDA-ARS?s Scientific Manuscript database

The foundations of a productive and healthy orchard are the rootstocks that provide anchorage, water and nutrients essential to the above ground portions of the trees. The utilization of composite trees has increased the efficiency of breeding productive apple trees by dividing the selection of sci...

Simple methods for raising tree and shrub seedlings in Afghanistan

Treesearch

R. Kasten Dumroese; Thomas D. Landis; Tara Luna; George Hernandez

2008-01-01

Growing trees and shrubs in nurseries is rewarding. You may wish to grow trees and shrubs for many reasons: 1) reforestation; 2) land stabilization; 3) fire wood (energy); 4) improving water quality; 5) urban landscapes; 6) providing shade; 7) producing fruits or nuts. If you enjoy growing plants, you are more likely to produce better trees and shrubs (Figure 1.1). In...

Simple methods for raising tree and shrub seedlings in Afghanistan [Dari version

Treesearch

R. Kasten Dumroese; Thomas D. Landis; Tara Luna; George Hernandez

2008-01-01

Growing trees and shrubs in nurseries is rewarding. You may wish to grow trees and shrubs for many reasons: 1) reforestation; 2) land stabilization; 3) fire wood (energy); 4) improving water quality; 5) urban landscapes; 6) providing shade; 7) producing fruits or nuts. If you enjoy growing plants, you are more likely to produce better trees and shrubs (Figure 1.1). In...

Mapping trees outside forests using high-resolution aerial imagery: a comparison of pixel- and object based classification approaches

Treesearch

Dacia M. Meneguzzo; Greg C. Liknes; Mark D. Nelson

2013-01-01

Discrete trees and small groups of trees in nonforest settings are considered an essential resource around the world and are collectively referred to as trees outside forests (ToF). ToF provide important functions across the landscape, such as protecting soil and water resources, providing wildlife habitat, and improving farmstead energy efficiency and aesthetics....

Tree breeding for pest resistance for the next 50 years: the search for cross resistance?

Treesearch

Alvin D. Yanchuk

2012-01-01

Research activities aimed at developing resistance to pests (insect, pathogens, mammals) in forest trees can be documented back over 5 decades. While a substantial body of research has been published on resistances in forest trees, not much of this work has made its way into applied tree improvement programs. There are several reasons for this, e.g.: (i) a new...

Variation of Specific Gravity in Plantation-Grown Trees of Bigleaf Mahogany

Treesearch

C. B. Briscoe; J. B. Harris; D. Wyckoff

1963-01-01

As a prelude to tree improvement work in the genus Swietenia, a study was made of specific gravity variation within the bole of six plantation-grown trees of bigleaf mahogany. Variation was appreciable, from 0.36 to 0.65 , and several patterns were determined. Specific gravity of the tree increased with growth rate, as expressed in diameter at breast height, but not...

Estimating Value Contribution of Tree and Stand Condition

Treesearch

R. Joss Hanna; Richard P. Thompson; Douglas D. Piirto; Jay E. Noel

1997-01-01

Key issues in encouraging forest management at the interface level in the oak woodlands are fire abatement, stand improvement, infection reduction, and hazard tree removal. The development of effective management prescriptions for stand improvement and economic returns provide guidance for homeowners, appraisers, and realtors. The purpose of this research project was...

Vertical stratification of forest canopy for segmentation of understory trees within small-footprint airborne LiDAR point clouds

NASA Astrophysics Data System (ADS)

Hamraz, Hamid; Contreras, Marco A.; Zhang, Jun

2017-08-01

Airborne LiDAR point cloud representing a forest contains 3D data, from which vertical stand structure even of understory layers can be derived. This paper presents a tree segmentation approach for multi-story stands that stratifies the point cloud to canopy layers and segments individual tree crowns within each layer using a digital surface model based tree segmentation method. The novelty of the approach is the stratification procedure that separates the point cloud to an overstory and multiple understory tree canopy layers by analyzing vertical distributions of LiDAR points within overlapping locales. The procedure does not make a priori assumptions about the shape and size of the tree crowns and can, independent of the tree segmentation method, be utilized to vertically stratify tree crowns of forest canopies. We applied the proposed approach to the University of Kentucky Robinson Forest - a natural deciduous forest with complex and highly variable terrain and vegetation structure. The segmentation results showed that using the stratification procedure strongly improved detecting understory trees (from 46% to 68%) at the cost of introducing a fair number of over-segmented understory trees (increased from 1% to 16%), while barely affecting the overall segmentation quality of overstory trees. Results of vertical stratification of the canopy showed that the point density of understory canopy layers were suboptimal for performing a reasonable tree segmentation, suggesting that acquiring denser LiDAR point clouds would allow more improvements in segmenting understory trees. As shown by inspecting correlations of the results with forest structure, the segmentation approach is applicable to a variety of forest types.

A Deliberate Practice Approach to Teaching Phylogenetic Analysis

PubMed Central

Hobbs, F. Collin; Johnson, Daniel J.; Kearns, Katherine D.

2013-01-01

One goal of postsecondary education is to assist students in developing expert-level understanding. Previous attempts to encourage expert-level understanding of phylogenetic analysis in college science classrooms have largely focused on isolated, or “one-shot,” in-class activities. Using a deliberate practice instructional approach, we designed a set of five assignments for a 300-level plant systematics course that incrementally introduces the concepts and skills used in phylogenetic analysis. In our assignments, students learned the process of constructing phylogenetic trees through a series of increasingly difficult tasks; thus, skill development served as a framework for building content knowledge. We present results from 5 yr of final exam scores, pre- and postconcept assessments, and student surveys to assess the impact of our new pedagogical materials on student performance related to constructing and interpreting phylogenetic trees. Students improved in their ability to interpret relationships within trees and improved in several aspects related to between-tree comparisons and tree construction skills. Student feedback indicated that most students believed our approach prepared them to engage in tree construction and gave them confidence in their abilities. Overall, our data confirm that instructional approaches implementing deliberate practice address student misconceptions, improve student experiences, and foster deeper understanding of difficult scientific concepts. PMID:24297294

Evaluation of an urban canopy model in a tropical city: the role of tree evapotranspiration

NASA Astrophysics Data System (ADS)

Liu, Xuan; Li, Xian-Xiang; Harshan, Suraj; Roth, Matthias; Velasco, Erik

2017-09-01

A single layer urban canopy model (SLUCM) with enhanced hydrologic processes, is evaluated in a tropical city, Singapore. The evaluation was performed using an 11 month offline simulation with the coupled Noah land surface model/SLUCM over a compact low-rise residential area. Various hydrological processes are considered, including anthropogenic latent heat release, and evaporation from impervious urban facets. Results show that the prediction of energy fluxes, in particular latent heat flux, is improved when these processes were included. However, the simulated latent heat flux is still underestimated by ∼40%. Considering Singapore’s high green cover ratio, the tree evapotranspiration process is introduced into the model, which significantly improves the simulated latent heat flux. In particular, the systematic error of the model is greatly reduced, and becomes lower than the unsystematic error in some seasons. The effect of tree evapotranspiration on the urban surface energy balance is further demonstrated during an unusual dry spell. The present study demonstrates that even at sites with relatively low (11%) tree coverage, ignoring evapotranspiration from trees may cause serious underestimation of the latent heat flux and atmospheric humidity. The improved model is also transferable to other tropical or temperate regions to study the impact of tree evapotranspiration on urban climate.

Regression trees for predicting mortality in patients with cardiovascular disease: What improvement is achieved by using ensemble-based methods?

PubMed Central

Austin, Peter C; Lee, Douglas S; Steyerberg, Ewout W; Tu, Jack V

2012-01-01

In biomedical research, the logistic regression model is the most commonly used method for predicting the probability of a binary outcome. While many clinical researchers have expressed an enthusiasm for regression trees, this method may have limited accuracy for predicting health outcomes. We aimed to evaluate the improvement that is achieved by using ensemble-based methods, including bootstrap aggregation (bagging) of regression trees, random forests, and boosted regression trees. We analyzed 30-day mortality in two large cohorts of patients hospitalized with either acute myocardial infarction (N = 16,230) or congestive heart failure (N = 15,848) in two distinct eras (1999–2001 and 2004–2005). We found that both the in-sample and out-of-sample prediction of ensemble methods offered substantial improvement in predicting cardiovascular mortality compared to conventional regression trees. However, conventional logistic regression models that incorporated restricted cubic smoothing splines had even better performance. We conclude that ensemble methods from the data mining and machine learning literature increase the predictive performance of regression trees, but may not lead to clear advantages over conventional logistic regression models for predicting short-term mortality in population-based samples of subjects with cardiovascular disease. PMID:22777999

Black Walnut at the Hardwood Tree Improvement and Regeneration Center (HTIRC)

Treesearch

Keith Woeste

2002-01-01

Black walnut research at the Hardwood Tree Improvement and Regenation Center (HTIRC) is focused on genetic improvement but our ultimate goal is much broader. Simply put, our goal is more and better black walnut for the Central Hardwoods Region (CHR). To reach this goal, our research has to be both very basic and practical, long and short term. If landowners are to make...

Northeast community tree guide: benefits, costs, and strategic planting

Treesearch

E. Gregory McPherson; James R. Simpson; Paula J. Peper; Shelley L. Gardner; Kelaine E. Vargas; Qingfu Xiao

2007-01-01

Trees make our cities more attractive and provide many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest control, liability, cleanup, and removal...

The molecular basis for tree growth habit in Prunus persica (peach)

USDA-ARS?s Scientific Manuscript database

The large size and spreading growth habit of trees requires excessive labor, land space, and pesticides. Genetically improving tree shapes so they can be planted at higher density and/or more readily adapted to mechanization would increase productivity and be more environmentally friendly. Current...

Black Cherry Volume Tables for Furniture-Type, Flat, 4/4-Inch Dimension from Small Low-Quality Trees.

Treesearch

Eugene F. Landt

1974-01-01

Volume tables are given for yield of clear-one-side, flat dimension from small, low-quality trees and boldts removed in a stand improvement cut of 54- to 76-year-old black cherry trees from northern Pennsylvania.

An Improved Binary Differential Evolution Algorithm to Infer Tumor Phylogenetic Trees.

PubMed

Liang, Ying; Liao, Bo; Zhu, Wen

2017-01-01

Tumourigenesis is a mutation accumulation process, which is likely to start with a mutated founder cell. The evolutionary nature of tumor development makes phylogenetic models suitable for inferring tumor evolution through genetic variation data. Copy number variation (CNV) is the major genetic marker of the genome with more genes, disease loci, and functional elements involved. Fluorescence in situ hybridization (FISH) accurately measures multiple gene copy number of hundreds of single cells. We propose an improved binary differential evolution algorithm, BDEP, to infer tumor phylogenetic tree based on FISH platform. The topology analysis of tumor progression tree shows that the pathway of tumor subcell expansion varies greatly during different stages of tumor formation. And the classification experiment shows that tree-based features are better than data-based features in distinguishing tumor. The constructed phylogenetic trees have great performance in characterizing tumor development process, which outperforms other similar algorithms.

Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses

PubMed Central

Bayzid, Md Shamsuzzoha; Mirarab, Siavash; Boussau, Bastien; Warnow, Tandy

2015-01-01

Because biological processes can result in different loci having different evolutionary histories, species tree estimation requires multiple loci from across multiple genomes. While many processes can result in discord between gene trees and species trees, incomplete lineage sorting (ILS), modeled by the multi-species coalescent, is considered to be a dominant cause for gene tree heterogeneity. Coalescent-based methods have been developed to estimate species trees, many of which operate by combining estimated gene trees, and so are called "summary methods". Because summary methods are generally fast (and much faster than more complicated coalescent-based methods that co-estimate gene trees and species trees), they have become very popular techniques for estimating species trees from multiple loci. However, recent studies have established that summary methods can have reduced accuracy in the presence of gene tree estimation error, and also that many biological datasets have substantial gene tree estimation error, so that summary methods may not be highly accurate in biologically realistic conditions. Mirarab et al. (Science 2014) presented the "statistical binning" technique to improve gene tree estimation in multi-locus analyses, and showed that it improved the accuracy of MP-EST, one of the most popular coalescent-based summary methods. Statistical binning, which uses a simple heuristic to evaluate "combinability" and then uses the larger sets of genes to re-calculate gene trees, has good empirical performance, but using statistical binning within a phylogenomic pipeline does not have the desirable property of being statistically consistent. We show that weighting the re-calculated gene trees by the bin sizes makes statistical binning statistically consistent under the multispecies coalescent, and maintains the good empirical performance. Thus, "weighted statistical binning" enables highly accurate genome-scale species tree estimation, and is also statistically consistent under the multi-species coalescent model. New data used in this study are available at DOI: http://dx.doi.org/10.6084/m9.figshare.1411146, and the software is available at https://github.com/smirarab/binning. PMID:26086579

Central Florida community tree guide: benefits, costs, and strategic planting

Treesearch

Paula J. Peper; E. Gregory McPherson; James R. Simpson; Shannon N. Albers; Qingfu Xiao

2010-01-01

Trees make our cities more attractive and provide many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest control, liability, cleanup, and removal...

Interior West community tree guide: benefits, costs, and strategic planting

Treesearch

Kelaine E. Vargas; Gregory E. McPherson; James R. Simpson; Paula J. Peper; Shelley L. Gardner; Qingfu Xiao

2007-01-01

Even as they increase the beauty of our surroundings, trees provide us with a great many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest...

Tropical community tree guide: benefits, costs, and strategic planting

Treesearch

Kelaine E. Vargas; Gregory E. McPherson; James R. Simpson; Paula J. Peper; Shelley L. Gardner; Qingfu Xiao

2008-01-01

Even as they increase the beauty of our surroundings, trees provide us with a great many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest...

Northern California coast community tree guide: benefits, costs, and strategic planting

Treesearch

E. Gregory McPherson; James R. Simpson; Paula. J. Peper; Aaron M.N. Crowell; Qingfu Xiao

2010-01-01

Trees make our cities more attractive and provide many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest control, liability, cleanup, and removal...

Temperate Interior West community tree guide: benefits, costs, and strategic planting

Treesearch

Kelaine E. Vargas; E. Gregory McPherson; James R. Simpson; Paula J. Peper; Shelley L. Gardner; Qingfu Xiao

2007-01-01

Even as they increase the beauty of our surroundings, trees provide us with a great many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest...

Lower Midwest community tree guide: benefits, costs, and strategic planting

Treesearch

Paula J. Peper; E. Gregory McPherson; James R. Simpson; Kelaine E. Vargas; Qingfu Xiao

2009-01-01

Even as they increase the beauty of our surroundings, trees provide us with a great many ecosystem services, including air quality improvement, energy conservation, stormwater interception, and atmospheric carbon dioxide reduction. These benefits must be weighed against the costs of maintaining trees, including planting, pruning, irrigation, administration, pest...

Object-Oriented Algorithm For Evaluation Of Fault Trees

NASA Technical Reports Server (NTRS)

Patterson-Hine, F. A.; Koen, B. V.

1992-01-01

Algorithm for direct evaluation of fault trees incorporates techniques of object-oriented programming. Reduces number of calls needed to solve trees with repeated events. Provides significantly improved software environment for such computations as quantitative analyses of safety and reliability of complicated systems of equipment (e.g., spacecraft or factories).

Individual tree control

Treesearch

Harvey A. Holt

1989-01-01

Controlling individual unwanted trees in forest stands is a readily accepted method for improving the value of future harvests. The practice is especially important in mixed hardwood forests where species differ considerably in value and within species individual trees differ in quality. Individual stem control is a mechanical or chemical weeding operation that...

Rooting cuttings from douglas-fir, white-fir, and California red fir christmas trees

Treesearch

C. M. Blankensop; R. Z. Callaham

1960-01-01

Christmas tree growers in California have asked geneticists to help improve the characteristics of the - wild species they are cultivating. The preferred Christmas trees of California are Shasta red fir (Abies magnifica A. Murr.), white fir (A. concolor (Gord. & Glend.) Lindl.), and Douglas-fir (Pseudotsuga...

The tree BVOC index

Treesearch

J.R. Simpson; E.G. McPherson

2011-01-01

Urban trees can produce a number of benefits, among them improved air quality. Biogenic volatile organic compounds (BVOCs) emitted by some species are ozone precursors. Modifying future tree planting to favor lower-emitting species can reduce these emissions and aid air management districts in meeting federally mandated emissions reductions for these compounds. Changes...

Tools for valuing tree and park services

Treesearch

E.G. McPherson

2010-01-01

Arborists and urban foresters plan, design, construct, and manage trees and parks in cities throughout the world. These civic improvements create walkable, cool environments, save energy, reduce stormwater runoff, sequester carbon dioxide, and absorb air pollutants. The presence of trees and green spaces in cities is associated with increases in property values,...

Tree growth and competition in an old-growth Picea abies forest of boreal Sweden: influence of tree spatial patterning

USGS Publications Warehouse

Fraver, Shawn; D'Amato, Anthony W.; Bradford, John B.; Jonsson, Bengt Gunnar; Jönsson, Mari; Esseen, Per-Anders

2013-01-01

Question: What factors best characterize tree competitive environments in this structurally diverse old-growth forest, and do these factors vary spatially within and among stands? Location: Old-growth Picea abies forest of boreal Sweden. Methods: Using long-term, mapped permanent plot data augmented with dendrochronological analyses, we evaluated the effect of neighbourhood competition on focal tree growth by means of standard competition indices, each modified to include various metrics of trees size, neighbour mortality weighting (for neighbours that died during the inventory period), and within-neighbourhood tree clustering. Candidate models were evaluated using mixed-model linear regression analyses, with mean basal area increment as the response variable. We then analysed stand-level spatial patterns of competition indices and growth rates (via kriging) to determine if the relationship between these patterns could further elucidate factors influencing tree growth. Results: Inter-tree competition clearly affected growth rates, with crown volume being the size metric most strongly influencing the neighbourhood competitive environment. Including neighbour tree mortality weightings in models only slightly improved descriptions of competitive interactions. Although the within-neighbourhood clustering index did not improve model predictions, competition intensity was influenced by the underlying stand-level tree spatial arrangement: stand-level clustering locally intensified competition and reduced tree growth, whereas in the absence of such clustering, inter-tree competition played a lesser role in constraining tree growth. Conclusions: Our findings demonstrate that competition continues to influence forest processes and structures in an old-growth system that has not experienced major disturbances for at least two centuries. The finding that the underlying tree spatial pattern influenced the competitive environment suggests caution in interpreting traditional tree competition studies, in which tree spatial patterning is typically not taken into account. Our findings highlight the importance of forest structure – particularly the spatial arrangement of trees – in regulating inter-tree competition and growth in structurally diverse forests, and they provide insight into the causes and consequences of heterogeneity in this old-growth system.

The improvement of precision for estimating the abundance of standing dead trees using auxiliary information under the FIA pot design

Treesearch

Hong Su An; David W. MacFarlane; Christopher W. Woodall

2012-01-01

Standing dead trees are an important component of forest ecosystems. However, reliable estimates of standing dead tree population parameters can be difficult to obtain due to their low abundance and spatial and temporal variation. After 1999, the Forest Inventory and Analysis (FIA) Program began collecting data for standing dead trees at the Phase 2 stage of sampling....

Conservation and restoration of forest trees impacted by non-native pathogens: the role of genetics and tree improvement

Treesearch

R.A. Sniezko; L.A. Winn

2017-01-01

North American native tree species in forest ecosystems, as well as managed forests and urban plantings, are being severely impacted by pathogens and insects. The impacts of these pathogens and insects often increase over time, and they are particularly acute for those species affected by non-native pathogens and insects. For restoration of affected tree species or for...

iGLASS: An Improvement to the GLASS Method for Estimating Species Trees from Gene Trees

PubMed Central

Rosenberg, Noah A.

2012-01-01

Abstract Several methods have been designed to infer species trees from gene trees while taking into account gene tree/species tree discordance. Although some of these methods provide consistent species tree topology estimates under a standard model, most either do not estimate branch lengths or are computationally slow. An exception, the GLASS method of Mossel and Roch, is consistent for the species tree topology, estimates branch lengths, and is computationally fast. However, GLASS systematically overestimates divergence times, leading to biased estimates of species tree branch lengths. By assuming a multispecies coalescent model in which multiple lineages are sampled from each of two taxa at L independent loci, we derive the distribution of the waiting time until the first interspecific coalescence occurs between the two taxa, considering all loci and measuring from the divergence time. We then use the mean of this distribution to derive a correction to the GLASS estimator of pairwise divergence times. We show that our improved estimator, which we call iGLASS, consistently estimates the divergence time between a pair of taxa as the number of loci approaches infinity, and that it is an unbiased estimator of divergence times when one lineage is sampled per taxon. We also show that many commonly used clustering methods can be combined with the iGLASS estimator of pairwise divergence times to produce a consistent estimator of the species tree topology. Through simulations, we show that iGLASS can greatly reduce the bias and mean squared error in obtaining estimates of divergence times in a species tree. PMID:22216756

Prospects for improving the salt tolerance of forest trees: A review

USGS Publications Warehouse

Allen, J.A.; Chambers, J.L.; Stine, M.

1994-01-01

Three major themes related to the improvement of salt tolerance in forest tree species are examined. First, evidence demonstrating that substantial intraspecific variation in salt tolerance exists in many species is presented. This evidence is important because it suggests that efforts to improve salt tolerance through conventional plant breeding techniques are justified. Second, the physiological and genetic mechanisms controlling salt tolerance are discussed briefly. Although salt tolerance involves the integration of numerous physiological processes, there is considerable evidence that differences in the ability to exclude Na+ and Cl- from leaves are the most important factors underlying intraspecific differences in tolerance. It is also becoming apparent that, although salt tolerance is a multigenic trait, major genes play an important role. Third, progress to date in improving salt tolerance of forest tree species is assessed. Compared with agricultural crops, relatively little progress has been made with either conventional or biotechnological methods, but field trials designed to test clones identified as salt tolerant in screening trials are underway now in several countries. We conclude that there is justification for cautious optimism about the prospects for improving salt tolerance in forest tree species.

Forest tree improvement in California-1970

Treesearch

M. Thompson Conkle

1972-01-01

Foresters in California were surveyed in 1970 to determine the extent of artificial regeneration and tree improvement efforts in the State. Seeding of Douglas-fir was the prevailing practice in the North Coast. Inland areas were being planted with conifers, including ponderosa, Jeffrey, Monterey, and sugar pines, Douglas-fir, and red and white firs. Manpower devoted to...

Tree improvement and environmental forestry

Treesearch

Warren T. Doolittle

1971-01-01

I was invited to talk to you about some of the things tree improvement can do to help our forest environment. Now I do not claim to have a corner on the market for ideas that geneticists can use in our environment, and I know that a number of scholarly papers have been presented previously on this subject.

A bibliography on forest genetics and forest tree improvement

Treesearch

Jonathan W. Wright

1955-01-01

The present boom in forest genetics makes it difficult for even the specialist to keep abreast of all the latest developments in this field. Therefore, in the fall of 1954 the Committee on Forest Tree Improvement, Society of American Foresters, asked the author to prepare a bibliography of publications issued in 1954.

Establishment and early development of 'Kanza', 'Peruque', and other pecan cultivars in northern U.S. growing regions

USDA-ARS?s Scientific Manuscript database

Most pecan (Carya illinoensis) nut production in the northern range of the species (Missouri, Kansas, Northern Arkansas) is from managed wild trees. Orchards of trees grafted to improved cultivars are slowly being established in the region as economic opportunities improve. Pecan cultivars that are ...

Current seed orchard techniques and innovations

Treesearch

Lawrence K. Miller; Jeffrey DeBell

2013-01-01

As applied forest tree improvement programs in the US Northwest move forward into the third cycle, seed orchards remain as the primary source of genetically improved forest tree seed used for reforestation. The vast majority of seed orchards in this region are coastal Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco), consistent with the high economic importance of...

A comparison of tree shelters and their effects on seedling survival and growth of two bottomland hardwood species: first-year results

Treesearch

H. Christoph Stuhlinger; Jeffrey A. Earl; Rebecca A. Montgomery; Buren B. DeFee

2006-01-01

Tree shelters can aid hardwood establishment by improving seedling survival and growth. Shelters are translucent plastic tubes that act as mini-greenhouses by maintaining a higher humidity environment. Can less-costly shelters achieve the same improved results as more expensive shelters?

The Influence of Choice Theory Anger Management Program (CTAMP) on the Ability of Prospective Psychological Counselors for Anger Management

ERIC Educational Resources Information Center

Gündogdu, Rezzan

2018-01-01

This research is a quasi-experimental study with pretest-posttest-fallow up test and experiment-control group to investigate the influence of Choice Theory-based Anger Management Psychoeducation Program (CTAMP) on the ability of students of Department of Psychological Counseling and Guidance (PCG) for anger management. The Trait Anger-Anger Style…

Soil carbon fractions in response to long-term crop rotations in the Loess Plateau of China

USDA-ARS?s Scientific Manuscript database

Diversified crop rotations may enhance C fractions and soil quality by affecting the quality and quantity of crop residue returned to the soil compared with monocropping and fallow. We evaluated the effect of 30-yr-old diversified crop rotations on soil C fractions at 0- to 15- and 15- to 30-cm dept...

Cover crops effect on farm benefits and nitrate leaching: linking economic and environmental analysis

NASA Astrophysics Data System (ADS)

Gabriel, José Luis; Vanclooster, Marnik; Garrido, Alberto; Quemada, Miguel

2013-04-01

Introducing cover crops interspersed with intensively fertilized crops in rotation has the potential to reduce nitrate leaching. However, despite the evident environmental services provided and the range of agronomic benefits documented in the literature, farmers' adoption of the technique is still limited because growing CC could lead to extra costs for the farm in three different forms: direct, indirect, and opportunity costs. Environmental studies are complex, and evaluating the indicators that are representative of the environmental impact of an agricultural system is a complicated task that is conducted by specialized groups and methodologies. Multidisciplinary studies may help to develop reliable approaches that would contribute to choosing the best agricultural strategies based on linking economic and environmental benefits. This study evaluates barley (Hordeum vulgare L., cv. Vanessa), vetch (Vicia villosa L., cv. Vereda) and rapeseed (Brassica napus L., cv. Licapo) as cover crops between maize, leaving the residue in the ground or selling it for animal feeding, and compares the economic and environmental results with respect to a typical maize-fallow rotation. Nitrate leaching for different weather conditions was calculated using the mechanistic-deterministic WAVE model, using the Richards equation parameterised with a conceptual model for the soil hydraulic properties for describing the water flow in the vadose zone, combined with field observed data. The economic impact was evaluated through stochastic (Monte-Carlo) simulation models of farms' profits using probability distribution functions of maize yield and cover crop biomass developed fitted with data collected from various field trials (during more than 5 years) and probability distribution functions of maize and different cover crop forage prices fitted from statistical sources. Stochastic dominance relationships are obtained to rank the most profitable strategies from a farm financial perspective. A two-criterion comparison scheme is proposed to rank alternative strategies based on farm profit and nitrate leaching levels, taking the baseline scenario as the maize-fallow rotation. The results show that cover crops reduced nitrate leaching respect to fallow almost every year and, when cover crop biomass is sold as forage instead of keeping it in the soil, greater profit were achieved than in the baseline scenario. While the fertilizer could be lower if cover crop is sold than if it is kept in the soil, the revenue obtained from the sale of the cover crops can compensate improvement of the soil properties. The results show that cover crops would perhaps provide a double dividend of greater profit and reduced nitrate leaching in intensive irrigated cropping systems in Mediterranean regions. But, if agro-environmental services provided by leaving the barley residue in the field were to be promoted, farmer subsidies would be required to promote cover cropping. Acknowledgements: Financial support by Spain CICYT (ref. AGL 2011-24732), Comunidad de Madrid (project AGRISOST, S2009/AGR-1630), Belgium FSR 2012 (ref. SPER/DST/340-1120525) and Marie Curie actions.

Low risk of Lyme borreliosis in a protected area on the Tyrrhenian coast, in central Italy.

PubMed

Mannelli, A; Cerri, D; Buffrini, L; Rossi, S; Rosati, S; Arata, T; Innocenti, M; Grignolo, M C; Bianchi, G; Iori, A; Tolari, F

1999-04-01

A comprehensive Lyme borreliosis risk assessment process was applied in S. Rossore Estate, on the Tyrrhenian coast, near Pisa, Italy. Host-seeking Ixodes ricinus nymphs peaked in May in oak-dominated deciduous wood (median, Q1-Q3, number of nymphs/50 m dragging = 4.5, 2.5-8), whereas host-seeking larvae peaked in August in the same habitat type (6.0, 4-17/50 m dragging). Prevalence of I. ricinus infestation was 88.9% in wild rodents (n = 11), 64.3% in fallow deer (n = 28) and 0.0% in wild boars (n = 5). Borrelia burgdorferi sensu lato was not isolated from rodents' organs, and from 80 I. ricinus nymphs and 50 adults. Moreover, PCR for B. burgdorferi sl carried out on 110 nymphs and 12 adult ticks also gave negative results. Forest workers were at higher risk of tick bite than other Estate employees (relative risk (RR): 1.7, p = 0.02). In spite of high levels of tick exposure, B. burgdorferi sl specific antibodies were not detected in sera from Estate personnel (n = 30) and sentinel animals (dogs, n = 23, fallow deer, n = 61).

Different functional modulation by heterotropic ligands (2,3-diphosphoglycerate and chlorides) of the two haemoglobins from fallow-deer (Dama dama).

PubMed

Angeletti, M; Pucciarelli, S; Priori, A M; Canofeni, S; Barra, D; Fioretti, E; Coletta, M

2001-02-01

Two haemoglobin components have been identified and purified from fallow-deer (Dama dama) erythrocytes. They are present in similar amounts and the two tetrameric molecules share the same alpha chain, while two different beta chains are detected in the two components. The beta chains differ by 14 residues, even though they both have 145 amino-acid residues, which account for a molecular mass of 16,023 and 16,064 Da, respectively, while alpha chain has 141 residues, yielding a molecular mass of 15,142 Da. Compared with human Hb, the N-terminal region of both beta chains shows deletion of Val beta 1 and the replacement of His beta 2 by a methionyl residue, a modification which is common to most ruminant haemoglobins. Although both isolated components show a low intrinsic affinity for oxygen, meaningful differences between the two haemoglobins have been found with respect to the effect of heterotropic effectors, such as 2,3-diphosphoglycerate and chloride ions. In view of the high sequence homology between the two components, the different effect of heterotropic ligands has been tentatively correlated to possible localized structural variations between beta chains of the two haemoglobin components.

Comparative evaluation of ERTS imagery for resource inventory in land use planning

NASA Technical Reports Server (NTRS)

Simonson, G. H. (Principal Investigator)

1973-01-01

The author has identified the following significant results. Numerous previously unmapped faults in central Oregon have been distinguished on ERTS-1 imagery. Tectonic mapping of fault-controlled linears demonstrates the utility of ERTS-1 imagery as a mean of illustrating and studying the regional tectonics of the state. Soil colors observed on ERTS-1 frame 1075-18150-5 at the eastern end of the Columbia basin correlate very well with those from descriptions of soils from that area. Digital output from frame 1021-18151 has shown the enhanced ability to interpret such features as joint patterns, shadowed landslide blocks, bottomlands, and drainage patterns. Widespread use of wheat-fallow rotation in northern Umatilla County, Oregon, insures that nearly one-half of the cultivated soil is devoid of vegetation much of the time. On ERTS-1 imagery, fallow fields are only slightly darker than fields of wheat stubble at the western end of the transect. Similar climate-related contrasts in soil color are visible on ERTS-1 Imagery from several other portions of the Columbia Basin. Absence of steep topography in the area mentioned, however, minimizes the disturbing effect caused by shadows.

Control of Xiphinema index populations by fallow plants under greenhouse and field conditions.

PubMed

Villate, Laure; Morin, Elisa; Demangeat, Gérard; Van Helden, Maarten; Esmenjaud, Daniel

2012-06-01

The dagger nematode Xiphinema index has a high economic impact in vineyards by direct pathogenicity and above all by transmitting the Grapevine fanleaf virus (GFLV). Agrochemicals have been largely employed to restrict the spread of GFLV by reducing X. index populations but are now banned. As an alternative to nematicides, the use of fallow plants between two successive vine crops was assessed. We selected plant species adapted to vineyard soils and exhibiting negative impact on nematodes and we evaluated their antagonistic effect on X. index in greenhouse using artificially infested soil, and in naturally infested vineyard conditions. The screening was conducted with plants belonging to the families Asteraceae (sunflower, marigold, zinnia, and nyjer), Poaceae (sorghum and rye), Fabaceae (white lupin, white melilot, hairy vetch, and alfalfa), Brassicaceae (rapeseed and camelina), and Boraginaceae (phacelia). In the greenhouse controlled assay, white lupin, nyjer, and marigold significantly reduced X. index populations compared with that of bare soil. The vineyard assay, designed to take into account the aggregative pattern of X. index distribution, revealed that marigold and hairy vetch are good candidates as cover crops to reduce X. index populations in vineyard. Moreover, this original experimental design could be applied to manage other soilborne pathogens.

Comparison between wavelet transform and moving average as filter method of MODIS imagery to recognize paddy cropping pattern in West Java

NASA Astrophysics Data System (ADS)

Dwi Nugroho, Kreshna; Pebrianto, Singgih; Arif Fatoni, Muhammad; Fatikhunnada, Alvin; Liyantono; Setiawan, Yudi

2017-01-01

Information on the area and spatial distribution of paddy field are needed to support sustainable agricultural and food security program. Mapping or distribution of cropping pattern paddy field is important to obtain sustainability paddy field area. It can be done by direct observation and remote sensing method. This paper discusses remote sensing for paddy field monitoring based on MODIS time series data. In time series MODIS data, difficult to direct classified of data, because of temporal noise. Therefore wavelet transform and moving average are needed as filter methods. The Objective of this study is to recognize paddy cropping pattern with wavelet transform and moving average in West Java using MODIS imagery (MOD13Q1) from 2001 to 2015 then compared between both of methods. The result showed the spatial distribution almost have the same cropping pattern. The accuracy of wavelet transform (75.5%) is higher than moving average (70.5%). Both methods showed that the majority of the cropping pattern in West Java have pattern paddy-fallow-paddy-fallow with various time planting. The difference of the planting schedule was occurs caused by the availability of irrigation water.

Land Degradation on Barren Hills: A Case Study in Northeast Vietnam

NASA Astrophysics Data System (ADS)

Nikolic, Nina; Schultze-Kraft, Rainer; Nikolic, Miroslav; Böcker, Reinhard; Holz, Ingo

2008-07-01

The term “barren hills” has been a keyword for land degradation in the uplands of Vietnam for over a decade. Nevertheless, the “barren” land is still not adequately ecologically characterized. In this work, we analyze land use-induced changes in vegetation and soil properties along a sequence of barren hills types formed on one physiotope. The study is undertaken in the Bac Kan province, one of the poorest upland regions where livestock plays an important role. A transition from an old-growth laurel forest to a sparse manmade grassland is characterized by a total of 177 species, rapid species turnover, and discrete dominants, and an overwhelming effect of disturbance history on both soil and vegetation patterning. Land degradation is most apparent in land use-induced maintenance of arrested successions, and the regeneration course is shifted towards drier formations. We hypothesize a conceptual model as an aid to understanding the process of early fallow differentiation in response to the patterned, fine-scale disturbances. The larger-scale implications of the observed trends in regeneration potentials deviation, and, in particular, the effect of water buffaloes in halting fallow successions, are discussed.

Connecting Digital Repeat Photography to Ecosystem Fluxes in Inland Pacific Northwest, US Cropping Systems

NASA Astrophysics Data System (ADS)

Russell, E.; Chi, J.; Waldo, S.; Pressley, S. N.; Lamb, B. K.; Pan, W.

2017-12-01

Diurnal and seasonal gas fluxes vary by crop growth stage. Digital cameras are increasingly being used to monitor inter-annual changes in vegetation phenology in a variety of ecosystems. These cameras are not designed as scientific instruments but the information they gather can add value to established measurement techniques (i.e. eddy covariance). This work combined deconstructed digital images with eddy covariance data from five agricultural sites (1 fallow, 4 cropped) in the inland Pacific Northwest, USA. The data were broken down with respect to crop stage and management activities. The fallow field highlighted the camera response to changing net radiation, illumination, and rainfall. At the cropped sites, the net ecosystem exchange, gross primary production, and evapotranspiration were correlated with the greenness and redness values derived from the images over the growing season. However, the color values do not change quickly enough to respond to day-to-day variability in the flux exchange as the two measurement types are based on different processes. The management practices and changes in phenology through the growing season were not visible within the camera data though the camera did capture the general evolution of the ecosystem fluxes.

Release of copper from embedded solid copper bullets into muscle and fat tissues of fallow deer (Dama dama), roe deer (Capreolus capreolus), and wild boar (Sus scrofa) and effect of copper content on oxidative stability of heat-processed meat.

PubMed

Schuhmann-Irschik, I; Sager, M; Paulsen, P; Tichy, A; Bauer, F

2015-10-01

When venison with embedded copper bullets was subjected to different culinary processing procedures, the amount of copper released from the embedded bullet was affected more by the retention period of the bullet in the meat during cool storage, than by the different heating protocols. The presence of copper fragments had no significant effect on levels of thiobarbituric acid reactive substances (TBARS). Conversely, TBARS in lean meat (fallow deer, wild boar, roe deer) were significantly affected by culinary treatment (higher TBARS in boiled and boiled-stored meat than in meat barbecued or boiled in brine). In pork-beef patties doped with up to 28mg/kg Cu, TBARS increased after dry-heating and subsequently storing the meat patties. The amount of copper doping had no effect on TBARS for 0 and 7days of storage, but a significant effect at day 14 (fat oxidation retarded at higher Cu doses). Evidence is presented that wild boar meat may be more sensitive to fat oxidation than pork-beef. Copyright © 2015 Elsevier Ltd. All rights reserved.

Canadian Whole-Farm Model Holos - Development, Stakeholder Involvement, and Model Application

NASA Astrophysics Data System (ADS)

Kroebel, R.; Janzen, H.; Beauchemin, K. A.

2017-12-01

Agriculture and Agri-Food Canada's Holos model, based mostly on emission factors, aims to explore the effect of management on Canadian whole-farm greenhouse gas emissions. The model includes 27 commonly grown annual and perennial crops, summer fallow, grassland, and 8 types of tree plantings, along with beef, dairy, sheep, swine and other livestock or poultry operations. Model outputs encompass net emissions of CO2, CH4, and N2O (in CO2 equivalents), calculated for various farm components. Where possible, algorithms are drawn from peer-reviewed publications. For consistency, Holos is aligned with the Canadian sustainability indicator and national greenhouse gas inventory objectives. Although primarily an exploratory tool for research, the model's design makes it accessible and instructive also to agricultural producers, educators, and policy makers. Model development, therefore, proceeds iteratively, with extensive stakeholder feedback from training sessions or annual workshops. To make the model accessible to diverse users, the team developed a multi-layered interface, with general farming scenarios for general use, but giving access to detailed coefficients and assumptions to researchers. The model relies on extensive climate, soil, and agronomic databases to populate regionally-applicable default values thereby minimizing keyboard entries. In an initial application, the model was used to assess greenhouse gas emissions from the Canadian beef production system; it showed that enteric methane accounted for 63% of total GHG emissions and that 84% of emissions originated from the cow-calf herd. The model further showed that GHG emission intensity per kg beef, nationally, declined by 14% from 1981 to 2011, owing to gains in production efficiency. Holos is now being used to consider further potential advances through improved rations or other management options. We are now aiming to expand into questions of grazing management, and are developing a novel carbon modelling approach based on the ICBM model. Also under development are sub-models to predict ammonia volatilization and water budgets. Development of Holos is expected to continue, forging an interactive link between ongoing research and the interests of stakeholders in an ever-changing agricultural environment.

Dendritic tree extraction from noisy maximum intensity projection images in C. elegans.

PubMed

Greenblum, Ayala; Sznitman, Raphael; Fua, Pascal; Arratia, Paulo E; Oren, Meital; Podbilewicz, Benjamin; Sznitman, Josué

2014-06-12

Maximum Intensity Projections (MIP) of neuronal dendritic trees obtained from confocal microscopy are frequently used to study the relationship between tree morphology and mechanosensory function in the model organism C. elegans. Extracting dendritic trees from noisy images remains however a strenuous process that has traditionally relied on manual approaches. Here, we focus on automated and reliable 2D segmentations of dendritic trees following a statistical learning framework. Our dendritic tree extraction (DTE) method uses small amounts of labelled training data on MIPs to learn noise models of texture-based features from the responses of tree structures and image background. Our strategy lies in evaluating statistical models of noise that account for both the variability generated from the imaging process and from the aggregation of information in the MIP images. These noisy models are then used within a probabilistic, or Bayesian framework to provide a coarse 2D dendritic tree segmentation. Finally, some post-processing is applied to refine the segmentations and provide skeletonized trees using a morphological thinning process. Following a Leave-One-Out Cross Validation (LOOCV) method for an MIP databse with available "ground truth" images, we demonstrate that our approach provides significant improvements in tree-structure segmentations over traditional intensity-based methods. Improvements for MIPs under various imaging conditions are both qualitative and quantitative, as measured from Receiver Operator Characteristic (ROC) curves and the yield and error rates in the final segmentations. In a final step, we demonstrate our DTE approach on previously unseen MIP samples including the extraction of skeletonized structures, and compare our method to a state-of-the art dendritic tree tracing software. Overall, our DTE method allows for robust dendritic tree segmentations in noisy MIPs, outperforming traditional intensity-based methods. Such approach provides a useable segmentation framework, ultimately delivering a speed-up for dendritic tree identification on the user end and a reliable first step towards further morphological characterizations of tree arborization.

Peak tree: a new tool for multiscale hierarchical representation and peak detection of mass spectrometry data.

PubMed

Zhang, Peng; Li, Houqiang; Wang, Honghui; Wong, Stephen T C; Zhou, Xiaobo

2011-01-01

Peak detection is one of the most important steps in mass spectrometry (MS) analysis. However, the detection result is greatly affected by severe spectrum variations. Unfortunately, most current peak detection methods are neither flexible enough to revise false detection results nor robust enough to resist spectrum variations. To improve flexibility, we introduce peak tree to represent the peak information in MS spectra. Each tree node is a peak judgment on a range of scales, and each tree decomposition, as a set of nodes, is a candidate peak detection result. To improve robustness, we combine peak detection and common peak alignment into a closed-loop framework, which finds the optimal decomposition via both peak intensity and common peak information. The common peak information is derived and loopily refined from the density clustering of the latest peak detection result. Finally, we present an improved ant colony optimization biomarker selection method to build a whole MS analysis system. Experiment shows that our peak detection method can better resist spectrum variations and provide higher sensitivity and lower false detection rates than conventional methods. The benefits from our peak-tree-based system for MS disease analysis are also proved on real SELDI data.

48 CFR 52.236-9 - Protection of Existing Vegetation, Structures, Equipment, Utilities, and Improvements.

Code of Federal Regulations, 2010 CFR

2010-10-01

... preserve and protect all structures, equipment, and vegetation (such as trees, shrubs, and grass) on or... work required under this contract. The Contractor shall only remove trees when specifically authorized... trees are broken during contract performance, or by the careless operation of equipment, or by workmen...

Two Improved Access Methods on Compact Binary (CB) Trees.

ERIC Educational Resources Information Center

Shishibori, Masami; Koyama, Masafumi; Okada, Makoto; Aoe, Jun-ichi

2000-01-01

Discusses information retrieval and the use of binary trees as a fast access method for search strategies such as hashing. Proposes new methods based on compact binary trees that provide faster access and more compact storage, explains the theoretical basis, and confirms the validity of the methods through empirical observations. (LRW)

Effects of a Tree Diagram on Students' Comprehension of Main Ideas in an Expository Text with Multiple Themes.

ERIC Educational Resources Information Center

Guri-Rozenblit, Sarah

1989-01-01

Examines the effect of a tree diagram on college students' comprehension of main ideas in a social sciences expository text. Concludes that the tree diagram significantly improved comprehension of main ideas and relations between elements, irrespective of the students' initial verbal and visual aptitudes. (RS)

City of Charleston, South Carolina Municipal Forest Resource Analysis

Treesearch

E.G. McPherson; J.R. Simpson; P.J. Peper; S.L. Gardner; K.E. Vargas; S.E. Maco; Q. Xiao

2006-01-01

Charleston, a charming Southern city appreciated for its rich history and culture, maintains trees as an integral component of the urban infrastructure (Figure 1). Research indicates that healthy trees can lessen impacts associated with the built environment by reducing stormwater runoff, energy consumption, and air pollutants. Trees improve urban life, making...

City of Charlotte, North Carolina Municipal Forest Resource Analysis

Treesearch

E.G. McPherson; J.R. Simpson; P.J. Peper; S.L. Gardner; K.E. Vargas; S.E. Maco; Q. Xiao

2005-01-01

Charlotte, a vibrant Southern city appreciated for its rich history and cultural wealth, maintains trees as an integral component of the urban infrastructure (Figure 1). Research indicates that healthy trees can lessen impacts associated with the built environment by reducing stormwater runoff, energy consumption, and air pollutants. Trees improve urban life, making...

48 CFR 52.236-9 - Protection of Existing Vegetation, Structures, Equipment, Utilities, and Improvements.

Code of Federal Regulations, 2012 CFR

2012-10-01

... preserve and protect all structures, equipment, and vegetation (such as trees, shrubs, and grass) on or... work required under this contract. The Contractor shall only remove trees when specifically authorized... trees are broken during contract performance, or by the careless operation of equipment, or by workmen...

48 CFR 52.236-9 - Protection of Existing Vegetation, Structures, Equipment, Utilities, and Improvements.

Code of Federal Regulations, 2014 CFR

2014-10-01

... preserve and protect all structures, equipment, and vegetation (such as trees, shrubs, and grass) on or... work required under this contract. The Contractor shall only remove trees when specifically authorized... trees are broken during contract performance, or by the careless operation of equipment, or by workmen...

48 CFR 52.236-9 - Protection of Existing Vegetation, Structures, Equipment, Utilities, and Improvements.

Code of Federal Regulations, 2013 CFR

2013-10-01

... preserve and protect all structures, equipment, and vegetation (such as trees, shrubs, and grass) on or... work required under this contract. The Contractor shall only remove trees when specifically authorized... trees are broken during contract performance, or by the careless operation of equipment, or by workmen...

48 CFR 52.236-9 - Protection of Existing Vegetation, Structures, Equipment, Utilities, and Improvements.

Code of Federal Regulations, 2011 CFR

2011-10-01

... preserve and protect all structures, equipment, and vegetation (such as trees, shrubs, and grass) on or... work required under this contract. The Contractor shall only remove trees when specifically authorized... trees are broken during contract performance, or by the careless operation of equipment, or by workmen...

Variation in resistance of hard pines to mouse damage

Treesearch

Frank S., Jr. Santamour; Frank E. Cunningham; Richard J. Peterson

1963-01-01

The most rapid progress in forest-tree improvement will be attained through artificial reforestation with superior genotypes. These trees may be native species, exotics, or hybrid combinations involving several species of diverse origins. Any tree planting creates an artificial situation, which is made even more artificial by the introduction of non-native types. In...

A new hybrid Christmas tree

Treesearch

William B. Critchfield

1965-01-01

A hybrid pine developed in the course of forest-tree improvement research. by the U. S. Forest Service has caught the interest of Christmas tree growers. It is a hybrid between two races of lodgepole pine (Pinus contorta) produced at the Institute of Forest Genetics at Placerville, California, and has some desirable attributes for use as a Christmas...

Reinforcement Learning Trees

PubMed Central

Zhu, Ruoqing; Zeng, Donglin; Kosorok, Michael R.

2015-01-01

In this paper, we introduce a new type of tree-based method, reinforcement learning trees (RLT), which exhibits significantly improved performance over traditional methods such as random forests (Breiman, 2001) under high-dimensional settings. The innovations are three-fold. First, the new method implements reinforcement learning at each selection of a splitting variable during the tree construction processes. By splitting on the variable that brings the greatest future improvement in later splits, rather than choosing the one with largest marginal effect from the immediate split, the constructed tree utilizes the available samples in a more efficient way. Moreover, such an approach enables linear combination cuts at little extra computational cost. Second, we propose a variable muting procedure that progressively eliminates noise variables during the construction of each individual tree. The muting procedure also takes advantage of reinforcement learning and prevents noise variables from being considered in the search for splitting rules, so that towards terminal nodes, where the sample size is small, the splitting rules are still constructed from only strong variables. Last, we investigate asymptotic properties of the proposed method under basic assumptions and discuss rationale in general settings. PMID:26903687

Tests with VHR images for the identification of olive trees and other fruit trees in the European Union

NASA Astrophysics Data System (ADS)

Masson, Josiane; Soille, Pierre; Mueller, Rick

2004-10-01

In the context of the Common Agricultural Policy (CAP) there is a strong interest of the European Commission for counting and individually locating fruit trees. An automatic counting algorithm developed by the JRC (OLICOUNT) was used in the past for olive trees only, on 1m black and white orthophotos but with limits in case of young trees or irregular groves. This study investigates the improvement of fruit tree identification using VHR images on a large set of data in three test sites, one in Creta (Greece; one in the south-east of France with a majority of olive trees and associated fruit trees, and the last one in Florida on citrus trees. OLICOUNT was compared with two other automatic tree counting, applications, one using the CRISP software on citrus trees and the other completely automatic based on regional minima (morphological image analysis). Additional investigation was undertaken to refine the methods. This paper describes the automatic methods and presents the results derived from the tests.

Linking field observations, Landsat and MODIS data to estimate agricultural change in European Russia.

NASA Astrophysics Data System (ADS)

de Beurs, K. M.; Ioffe, G.

2011-12-01

Agricultural reform has been one of the most important anthropogenic change processes in European Russia that has been unfolding since the formal collapse of the Soviet Union at the end of 1991. Widespread land abandonment is perhaps the most vivid side effect of the reform, even visible in synoptic imagery. Currently, Russia is transitioning into a country with an internal "archipelago" of islands of productive agriculture around cities embedded in a matrix of unproductive, abandoned lands. This heterogeneous spatial pattern is mainly driven by depopulation of the least favorable parts of the countryside, where "least favorable" is a function of fertility, remoteness, and their interaction. In this work we provide a satellite, GIS and field based overview of the current agricultural developments in Russia and look beyond the unstable period immediately following the collapse of the Soviet Union. We apply Landsat images in one of Russia's oblasts to create a detailed land cover map. We then use a logistic model to link the Landsat land cover map with the inter-annual variability in key phenological parameters calculated from MODIS to derive the percent of cropland per 500m MODIS pixel. By evaluating the phenological characteristics of the MODIS curves for each year we determine whether a pixel was actually cropped or left fallow. A comparison of satellite-estimated cropped areas with regional statistics (by rayon) revealed that the satellite estimates are highly correlated with the regional statistics for both arable lands and successfully cropped areas. We use the crop maps to determine the number of times a particular area was cropped between 2002 and 2009 by summing all the years with crops per pixel. This variable provides a good indication about the intensification and de-intensification of the Russian croplands over the last decade. We have visited several rural areas in Russia and we link the satellite data with information acquired through field interviews and photographs. Russian farmers employ a variety of crop-rotation schemes. In the Russian grain belt, the farmers used to be on a seven-year rotation, which typically included only one year of fallow and a variety of grain crops in the remaining six years. Through field interviews and satellite observations we learned that the crop rotation schedules are changing from a seven year crop cycle focused on grain production to a three year crop cycle focused on the production of sunflower which is currently most profitable. In addition, a switch is underway from the dominant growth of spring wheat to stronger reliance on winter wheat which has better growth potential in the area. The number of cropped years, or the complementary number of fallow years, gives an indication of the type of crop cycle that is applied. In addition, drier areas are predicted to reveal more fallow years due to decisions by farm administrators. We will discuss how the ongoing changes represent adaptations to changing climatological and social circumstances.

Positive effects of afforestation efforts on the health of urban soils

Treesearch

Emily E. Oldfield; Alexander J. Felson; Stephen A. Wood; Richard A. Hallett; Michael S. Strickland; Mark A. Bradford

2014-01-01

Large-scale tree planting projects in cities are increasingly implemented as a strategy to improve the urban environment. Trees provide multiple benefits in cities, including reduction of urban temperatures, improved air quality, mitigation of storm-water run-off, and provision of wildlife habitat. How urban afforestation affects the properties and functions of urban...

Proceedings: second Lake States forest tree improvement conference

Treesearch

Lake States Forest Experiment Station

1955-01-01

I am firmly convinced that the Lake States Forest Tree Improvement Committee, and similar groups in other regions, can play an important role in encouraging and coordinating research and other activities in forest genetics. As this new field of work continues to expand, which it assuredly will, it will become of increasing importance to maintain close liaison among the...

Historical aspects of somatic embryogenesis in woody plants

Treesearch

Subhash C. Minocha; Rakesh Minocha

1995-01-01

During the next few decades, the world demand for wood products is expected to rise sharply. To meet this growing demand, there will be an increasing need for mass production of improved-quality planting stock of many tree species. The conventional methods of tree improvement and selection offer only limited possibility of meeting the growing demands. Therefore, new...

The role of tree improvement programs for ex situ gene conservation of coastal Douglas-fir in the Pacific Northwest.

Treesearch

Sara R. Lipow; G. Randy Johnson; J. Bradley St. Claiff; Keith J. Jayawickrama

2003-01-01

We enumerate the genetic resources for coastal Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco var. menziesii) in tree improvement programs in the Pacific Northwest USA and evaluate how they contribute to gene conservation of the species. The first-generation programs include over four million progeny from 33,928 selections...

Tree improvement in the Pacific Northwest.

Treesearch

R. Johnson

2000-01-01

Advanced-generation tree breeding programs are underway for Douglas-fir and coastal western hemlock. These programs will continue to improve growth rates and other traits. Regardless of whether seeds is from a seed orchard or natural collection, it must be used in its appropriated breeding zone or seed zone. These zones vary by species. Breeding programs are underway...

The role of genetics and tree improvement in southern forest productivity

Treesearch

Ronald C. Schmidtling; T.L. Robison; S.E. McKeand; R.J. Rousseau; H.L. Allen; B. Goldfarb

2004-01-01

Because of space limitations, a thorough discussion of the rich history of tree improvement in the Southeastern United States cannot be totally accomplished in this forum. However, a synopsis of key program highlights and the people who forged and directed these programs is presented, together with a discussion of current and future work. This discussion covers...

New Hybrid Algorithms for Estimating Tree Stem Diameters at Breast Height Using a Two Dimensional Terrestrial Laser Scanner

PubMed Central

Kong, Jianlei; Ding, Xiaokang; Liu, Jinhao; Yan, Lei; Wang, Jianli

2015-01-01

In this paper, a new algorithm to improve the accuracy of estimating diameter at breast height (DBH) for tree trunks in forest areas is proposed. First, the information is collected by a two-dimensional terrestrial laser scanner (2DTLS), which emits laser pulses to generate a point cloud. After extraction and filtration, the laser point clusters of the trunks are obtained, which are optimized by an arithmetic means method. Then, an algebraic circle fitting algorithm in polar form is non-linearly optimized by the Levenberg-Marquardt method to form a new hybrid algorithm, which is used to acquire the diameters and positions of the trees. Compared with previous works, this proposed method improves the accuracy of diameter estimation of trees significantly and effectively reduces the calculation time. Moreover, the experimental results indicate that this method is stable and suitable for the most challenging conditions, which has practical significance in improving the operating efficiency of forest harvester and reducing the risk of causing accidents. PMID:26147726

HT/HP x-tree and downhole fiber optic connectors and their use on subsea intelligent wells

NASA Astrophysics Data System (ADS)

Wright, Perry; Barlow, Stewart

2004-12-01

Offshore Oil and Gas R&D has been committed to improved reservoir performance through production monitoring. Technology improvements in these areas offer the greatest potential returns through increased knowledge of the reservoir, and the improvements in real-time production control that the technology and knowledge base can provide. One area of technology that supports this development is the growing application of fiber optic sensors for reservoir and production monitoring. These sensors cannot function in isolation, and need support in the form of fiber optic connection systems for x-tree penetrations. ODI have been developing products for fiber optic tree penetrations and down-hole wet connections for the last 4 years, working with Intelligent Wells Group at BP America Production Company in Houston. This paper discusses the application and reliability of fiber optic connectors, and reviews the development of the ODI I-CONN connection system and its application for vertical and horizontal x-trees, work-over systems and running tools, and down-hole systems.

[Health assessment of individual trees in natural Larix gmelinii forest in Great Xing' an Mountains of China].

PubMed

Zhu, Yu; Liu, Zhao-Gang; Jin, Guang-Ze

2013-05-01

To integrate the health assessment results of individual trees into the health assessment of subcompartment (or stand) scale could improve the accuracy of subcompartment (or stand) scale health assessment, and realize the coupling process between the individual tree scale and the subcompartment (or stand) scale, providing a theoretical basis for the realization of forest health management. Taking the natural Larix gmelinii forest in Great Xing' an Mountains as the object, a health assessment indicators system of individual trees was established, which included root state, canopy defoliation degree, crown transparency, crown overlap, crown dieback ratio, live crown ratio, crown skewness, and vertical competition index. The principal component analysis (PCA) was employed to eliminate the correlations, the entropy value method was adopted to confirm the weight of each indicator, and the health status of individual L. gmelinii was assessed by fuzzy synthetic evaluation (FSE) method. Based on the health assessment results, a prediction model of the individual tree health was established by discriminant analysis (DA) method. The results showed that the trees in sub-healthy gradation were up to 36.7%, and those in healthy gradation only reached 12.9%. The proportion of the trees in unhealthy gradation exceeded that of the trees in healthy gradation, occupying 21.1% of the total. The prediction accuracy of the established model was 86.3%. More rational and effective management measures should be taken to improve the tree health grade.

The Estimation of Tree Posterior Probabilities Using Conditional Clade Probability Distributions

PubMed Central

Larget, Bret

2013-01-01

In this article I introduce the idea of conditional independence of separated subtrees as a principle by which to estimate the posterior probability of trees using conditional clade probability distributions rather than simple sample relative frequencies. I describe an algorithm for these calculations and software which implements these ideas. I show that these alternative calculations are very similar to simple sample relative frequencies for high probability trees but are substantially more accurate for relatively low probability trees. The method allows the posterior probability of unsampled trees to be calculated when these trees contain only clades that are in other sampled trees. Furthermore, the method can be used to estimate the total probability of the set of sampled trees which provides a measure of the thoroughness of a posterior sample. [Bayesian phylogenetics; conditional clade distributions; improved accuracy; posterior probabilities of trees.] PMID:23479066

Tree Classification Software

NASA Technical Reports Server (NTRS)

Buntine, Wray

1993-01-01

This paper introduces the IND Tree Package to prospective users. IND does supervised learning using classification trees. This learning task is a basic tool used in the development of diagnosis, monitoring and expert systems. The IND Tree Package was developed as part of a NASA project to semi-automate the development of data analysis and modelling algorithms using artificial intelligence techniques. The IND Tree Package integrates features from CART and C4 with newer Bayesian and minimum encoding methods for growing classification trees and graphs. The IND Tree Package also provides an experimental control suite on top. The newer features give improved probability estimates often required in diagnostic and screening tasks. The package comes with a manual, Unix 'man' entries, and a guide to tree methods and research. The IND Tree Package is implemented in C under Unix and was beta-tested at university and commercial research laboratories in the United States.