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Sample records for infrared spectroscopic ellipsometry

  1. Rotatable broadband retarders for far infrared spectroscopic ellipsometry

    SciTech Connect

    Kang, T.D.; Carr, G.; Zhou, T.; Kotelyanskii, M.; Sirenko, A.A.

    2010-12-09

    Rotatable retarders have been developed for applications in spectroscopic, full Mueller Matrix ellipsometry in the far-IR spectral range. Several materials, such as silicon, KRS-5, and a commercial polymer plastic (TOPAS) have been utilized to achieve a fully adjustable retardation between 0{sup o} and 90{sup o}. Experimental characteristics of the rotatable retarders that utilize three- and four-bounce designs are compared with calculations. We discuss the effect of light focusing on the performance of these rotatable retarders. Broadband optical retarders are required for spectroscopic ellipsometry in its full Mueller matrix (MM) realization. Performance of the MM ellipsometer depends on the capability to produce substantially linearly-independent Stokes vectors for the light incident onto the sample. As has been shown, the errors in the measuredMMof the sample are proportional to the condition number of the 4 x 4 matrix composed of the Stokes vectors of four polarization states incident at the sample. It can be proven that it is impossible to cover the Poincare sphere with linearly-independent Stokes vectors by only changing the linear polarization at the input surface of a stationary retarder. As we will illustrate further in this paper, total coverage of the Poincare sphere is possible by rotating a tandem of a linear polarizer and a retarder with a retardation of 90{sup o}. It is this goal that we are trying to achieve in the retarder designs described in this paper.

  2. Spectroscopic rotating compensator ellipsometry in the infrared: retarder design and measurement

    NASA Astrophysics Data System (ADS)

    den Boer, J. H. W. G.; Kroesen, G. M. W.; de Hoog, F. J.

    1997-05-01

    Rotating compensator ellipsometry (RCE) is an approach to ellipsometry that is superior to the widely used rotating analyser ellipsometry (RAE). An essential component in RCE is a retarder that generates a retardance close to 0957-0233/8/5/004/img1. In contrast to RCE at a single wavelength, spectroscopic RCE requires a retarder that performs well over a wide range of the used spectrum. The designed retarder is capable of this and works on the principle of total internal reflection. Making use of this retarder, RCE is tested by measuring the optical characteristics of a Teflon-like layer on an aluminium substrate. The results show good agreement with similar RAE measurements, as well as data calculated from an ellipsometric model.

  3. Probing the carrier concentration profiles in phosphorus-implanted germanium using infrared spectroscopic ellipsometry

    SciTech Connect

    D'Costa, Vijay Richard Yeo, Yee-Chia

    2015-02-21

    Spectroscopic ellipsometry with photon energy in the 0.045–0.65 eV range was used to investigate germanium samples implanted with 30 keV phosphorus ions and annealed at 700 °C. The infrared response of implanted layers is dominated by free carrier absorption which is modeled using a Drude oscillator. The carrier concentration profiles were modeled using an error function, and compared with those obtained by electrochemical capacitance-voltage profiling and secondary ion mass spectrometry. In the flat region of the carrier concentration profile, average carrier concentration and mobility of 1.40 × 10{sup 19} cm{sup −3} and 336 cm{sup 2}V{sup −1}s{sup −1}, respectively, were obtained. A phosphorus diffusivity of ∼1.2 × 10{sup −13} cm{sup 2}/s was obtained. The mobility versus carrier concentration relationships obtained for the implanted samples are close to the empirical relationship for bulk Ge.

  4. Optical constants of neat liquid-chemical warfare agents and related materials measured by infrared spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Yang, C. S.-C.; Williams, B. R.; Hulet, M. S.; Tiwald, T. E.; Miles, R. W., Jr.; Samuels, A. C.

    2011-05-01

    We studied various liquids using a vertical attenuated total reflection (ATR) liquid sampling assembly in conjunction with Infrared Variable Angle Spectroscopic Ellipsometry (IR-VASE), to determine the infrared optical constants of several bulk liquids related to chemical warfare. The index of refraction, n, and the extinction coefficient, k, of isopropyl methylphosphonofluoridate (Sarin or GB), isopropyl alcohol (IPA) (a precursor of GB), and dimethyl methylphosphonate (DMMP)-a commonly employed simulant for GB, measured by our vertical ATR IR-VASE setup are closely matched to those found in other studies. We also report the optical constants of cyclohexyl methylphosphonofluoridate (GF), 2-(diisopropylamino)ethyl methylphosphonothioate (VX), bis-(2-chloroethyl) sulfide (HD), and 2-chlorovinyl dichloroarsine (L, Lewisite). The ATR IR-VASE technique affords an accurate measurement of the optical constants of these hazardous compounds.

  5. Fine characterization of ITO layers by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.; Suzuki, Y.

    1996-08-01

    Indium tin oxide films (ITO) are characterized precisely by spectroscopic ellipsometry which determines not only the thickness of the layers but also the optical indices in a large spectral range. The quality of the ITO films is checked by the transparency of the layers in the visible range 0.4 to 0.6 micrometers . Indeed, target degradation is detected by the occurrence of an absorption band in this region. The electrical conductivity of the layer can also be deduced by the Drude model applied to the absorption in the infrared region. Moreover, spectroscopic ellipsometry can give all these information on all the surface of the panels, checking at the same time the homogeneity and the stability of the deposition process. Different experimental examples will be presented and discussed.

  6. Spectroscopic ellipsometry as a sensitive monitor of materials contamination

    NASA Technical Reports Server (NTRS)

    Hale, Jeffrey S.; Hilfiker, James N.; Spady, Blaine; Synowicki, R.; Woollam, John A.

    1995-01-01

    Spectroscopic ellipsometry is demonstrated to be extremely sensitive to contamination layers in the thickness range from 0.1 nm to 10 microns. In the present experiments we deposit either a thin lubricating oil (WD-40) or mineral oil continuously onto Ir, Cu, Al, Au, and V substrates from a bubbler, and monitor its thickness growth from sub-nanometer to tens of nanometers as a function of time. Re-evaporation of contaminant oils is also monitored in real-time by ellipsometry.

  7. Evaluation of the SEI using a multilayer spectroscopic ellipsometry model

    DOE PAGES

    Dufek, Eric J.

    2014-08-28

    A multilayer spectroscopic ellipsometry (SE) model has been developed to characterize SEI formation. The model, which consists of two Cauchy layers, is constructed with an inner layer meant to model primarily inorganic compounds adjacent to an electrode and an outer layer which mirrors polymeric, organic constituents on the exterior of the SEI. Comparison of 1:1 EC:EMC and 1:4 EC:EMC with 1.0 M LiPF₆ shows distinct differences in the two modeled layers. The data suggest that the thickness of both layers change over a wide potential range. These changes have been linked with other reports on the growth of the SEI.

  8. Characterization by spectroscopic Ellipsometry, the physical properties of silver nanoparticles.

    NASA Astrophysics Data System (ADS)

    Coanga, Jean-Maurice

    2013-04-01

    Physicists are able to change their minds through their experiments. I think it is time to go kick the curse and go further in research if we want a human future. I work in the Nano-Optics and Plasmonics research. I defined with ellipsomètrie the structure of new type of Nano particles of silver. It's same be act quickly to replace the old dirty leaded electronic-connexion chip and by the other hand to find a new way for the heath care of cancer disease by nanoparticles the next killers of bad cells. Silver nanoparticle layers are obtained by Spark Plasma Sintering are investigated as an alternative to lead alloy based material for solder joint in power mechatronics modules. These layers are characterized by mean of conventional techniques that is the dilatometry technique, the resistivity measurement through the van der Pauw method, and the flash laser technique. Furthermore, the nanoparticles of silver layer are deeply studied by UV-Visible spectroscopic ellipsometry. Spectroscopic angles parameters are determined in function of temperature and dielectric constants are deduced and analyzed through an optical model which takes into account a Drude and a Lorentz component within the Bruggeman effective medium approximation (EMA). The relaxation times and the electrical conductivity are plot in function of temperature. The obtained electrical conductivity give significant result in good agreement to those reported by four points electrical measurement method.

  9. Optical properties of InN studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Chunya, Ye; Wei, Lin; Jin, Zhou; Shuping, Li; Li, Chen; Heng, Li; Xiaoxuan, Wu; Songqing, Liu; Junyong, Kang

    2016-10-01

    With recently developed InN epitaxy via a controlling In bilayer, spectroscopic ellipsometry (SE) measurements had been carried out on the grown InN and the measured ellipsometric spectra were fitted with the Delta Psi2 software by using a suitable model and the dispersion rule. The thickness was measured by a scanning electron microscope (SEM). Insight into the film quality of InN and the lattice constant were gained by X-ray diffraction (XRD). By fitting the SE, the thickness of the InN film is consistent with that obtained by SEM cross-sectional thickness measurement. The optical bandgap of InN was put forward to be 1.05 eV, which conforms to the experimental results measured by the absorption spectrum and cathodoluminescence (CL). The refractive index and the extinction coefficient of interest were represented for InN, which is useful to design optoelectronic devices. Project supported by the State Key Development Program for Basic Research of China (No. 2012CB619301), the National High Technology Research and Development Program of China (No. 2014AA032608), the National Natural Science Foundation of China (Nos. 11204254, 11404271), and the Fundamental Research Funds for the Central Universities (Nos. 2012121014, 20720150027).

  10. Imaging spectroscopic ellipsometry of MoS2

    NASA Astrophysics Data System (ADS)

    Funke, S.; Miller, B.; Parzinger, E.; Thiesen, P.; Holleitner, A. W.; Wurstbauer, U.

    2016-09-01

    Micromechanically exfoliated mono- and multilayers of molybdenum disulfide (MoS2) are investigated by spectroscopic imaging ellipsometry. In combination with knife edge illumination, MoS2 flakes can be detected and classified on arbitrary flat and also transparent substrates with a lateral resolution down to 1-2 µm. The complex dielectric functions from mono- and trilayer MoS2 are presented. They are extracted from a multilayer model to fit the measured ellipsometric angles employing an anisotropic and an isotropic fit approach. We find that the energies of the critical points of the optical constants can be treated to be independent of the utilized model, whereas the magnitude of the optical constants varies with the used model. The anisotropic model suggests a maximum absorbance for a MoS2 sheet supported by sapphire of about 14% for monolayer and of 10% for trilayer MoS2. Furthermore, the lateral homogeneity of the complex dielectric function for monolayer MoS2 is investigated with a spatial resolution of 2 µm. Only minor fluctuations are observed. No evidence for strain, for a significant amount of disorder or lattice defects can be found in the wrinkle-free regions of the MoS2 monolayer from complementary µ-Raman spectroscopy measurements. We assume that the minor lateral variation in the optical constants are caused by lateral modification in the van der Waals interaction presumably caused by the preparation using micromechanical exfoliation and viscoelastic stamping.

  11. Spectroscopic ellipsometry studies of HF treated Si (100) surfaces

    NASA Astrophysics Data System (ADS)

    Yao, Huade; Woollam, John A.; Alterovitz, Samuel A.

    1993-08-01

    Both ex situ and in situ spectroscopic ellipsometry (SE) measurements were employed to investigate the effects of HF cleaning on Si surfaces. The hydrogen-terminated (H-terminated) Si surface was modeled as an equivalent dielectric layer, and monitored in real time by SE measurements. The SE analyses indicate that after a 20-s 9:1 HF dip without rinse, the Si(100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si(100) surface was observed, in an ultrahigh vacuum (UHV) chamber, and analyzed by the in situ SE. Evidence for desorption of the H-terminated Si surface-layer, after being heated to approximately 550 C in the UHV chamber, is presented and discussed. This is the first use of an ex situ and in situ real-time, nondestructive technique capable of showing state of passivation, the rate of reoxidation, and the surface roughness of the H-terminated Si surfaces.

  12. Spectroscopic ellipsometry studies of HF treated Si (100) surfaces

    NASA Astrophysics Data System (ADS)

    Yao, Huade; Woollam, John A.; Alterovitz, Samuel A.

    1993-06-01

    Both ex situ and in situ spectroscopic ellipsometry (SE) measurements were employed to investigate the effect of HF cleaning on Si surfaces. The hydrogen-terminated (H-terminated) Si surface was modeled as an equivalent dielectric layer, and monitored in real time by SE measurements. The SE analyses indicate that, after a 20-sec 9:1 HF dip without rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed, in an ultrahigh vacuum chamber (UHV), and analyzed by the in situ SE. Evidence for desorption of the H-terminated Si surface layer, after being heated to about 550 C in the UHV chamber, is presented and discussed. This is the first use of an ex situ and in situ real-time, nondestructive technique capable of showing state of passivation, the rate of reoxidation, and the surface roughness of the H-terminated Si surfaces.

  13. Photomask CD and LER characterization using Mueller matrix spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Heinrich, A.; Dirnstorfer, I.; Bischoff, J.; Meiner, K.; Ketelsen, H.; Richter, U.; Mikolajick, T.

    2014-10-01

    Critical dimension and line edge roughness on photomask arrays are determined with Mueller matrix spectroscopic ellipsometry. Arrays with large sinusoidal perturbations are measured for different azimuth angels and compared with simulations based on rigorous coupled wave analysis. Experiment and simulation show that line edge roughness leads to characteristic changes in the different Mueller matrix elements. The influence of line edge roughness is interpreted as an increase of isotropic character of the sample. The changes in the Mueller matrix elements are very similar when the arrays are statistically perturbed with rms roughness values in the nanometer range suggesting that the results on the sinusoidal test structures are also relevant for "real" mask errors. Critical dimension errors and line edge roughness have similar impact on the SE MM measurement. To distinguish between both deviations, a strategy based on the calculation of sensitivities and correlation coefficients for all Mueller matrix elements is shown. The Mueller matrix elements M13/M31 and M34/M43 are the most suitable elements due to their high sensitivities to critical dimension errors and line edge roughness and, at the same time, to a low correlation coefficient between both influences. From the simulated sensitivities, it is estimated that the measurement accuracy has to be in the order of 0.01 and 0.001 for the detection of 1 nm critical dimension error and 1 nm line edge roughness, respectively.

  14. Study of biological reaction in cancer cell with spectroscopic imaging ellipsometry

    NASA Astrophysics Data System (ADS)

    Chen, Yu-Da; Hsu, Hao Yun; Khaleel, Mai Ibrahim; Chang, Yia-Chung; Wu, Chien-Hsun; Wu, Han-Chung

    2016-09-01

    We present experimental studies of live cancer cells via microscopic imaging ellipsometry (MIE). The Rotating Compensator Ellipsometry (RCE) is used for our measurements. Ellipsometry spectra with signals integrated over a 20μm×20μm area in visible range (450nm to 750nm) are obtained with the Optrel MULTISKOP system for both specular reflection and off-specular scattering. The microscopic ellipsometry (ME) images at a few fixed wavelengths within the same range were also analyzed. Dielectric constants for glass slide, culture fluid, and glass cover plate were firstly characterized by spectroscopic ellipsometry measurements, which can be used in the simulation for MIE measurements of cancer cells embedded in the culture fluid and sandwiched between a glass slide and cover plate. The measured ME spectra and images of cancer cells before and after medicine injection are measured and analyzed.

  15. Characterization of Liquid Crystal Layer and Cholesteric Film by Renormalized Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Kimura, Munehiro; Kamada, Hirokazu; Onuma, Toshihiko; Akahane, Tadashi

    2009-03-01

    Renormalized transmission spectroscopic ellipsometry (RTSE) is used to evaluate the device parameters of liquid crystal display (LCD). To determine the reduced dielectric and elastic constants, threshold voltage, pretilt angle, cell gap, and surface polar anchoring energy coefficient, symmetrically oblique incidence transmission ellipsometry (SOITE) was applied to vertical-alignment (VA) LCD. It is suggested that the rubbing process on the alignment films for VA LCD does not disturb the measurement of the genuine surface polar anchoring energy coefficient. RTSE is also applicable to the determination of the total twist angle of the cholesteric film.

  16. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment

    SciTech Connect

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; Bittrich, Eva; Rauch, Sebastian; Uhlmann, Petra; Eichhorn, Klaus-Jochen; Seeber, Michael; Luzinov, Igor; Kilbey, S. Michael; Lokitz, Bradley S.; Minko, Sergiy; Hinrichs, Karsten

    2015-02-10

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes with high potential for biosensing and biomedical applications are studied by in-situ infrared-spectroscopic ellipsometry (IRSE). IRSE as a highly sensitive non-destructive technique allows us to investigate protein adsorption on polymer brushes in aqueous environment in dependence of external stimuli like temperature and pH. These stimuli are, for instance, relevant in switchable mixed brushes containing poly(N-isopropyl acrylamide) and poly(acrylic acid), respectively. We use such brushes as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. IRSE can distinguish between polymer-specific vibrational bands, which yield insights into the hydration state of the brushes, and changes in the protein-specific amide bands, which are related to changes of the protein secondary structure.

  17. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment

    DOE PAGES

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; ...

    2015-02-10

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes with high potential for biosensing and biomedical applications are studied by in-situ infrared-spectroscopic ellipsometry (IRSE). IRSE as a highly sensitive non-destructive technique allows us to investigate protein adsorption on polymer brushes in aqueous environment in dependence of external stimuli like temperature and pH. These stimuli are, for instance, relevant in switchable mixed brushes containing poly(N-isopropyl acrylamide) and poly(acrylic acid), respectively. We use such brushes as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. IRSE can distinguish between polymer-specific vibrational bands, which yield insights intomore » the hydration state of the brushes, and changes in the protein-specific amide bands, which are related to changes of the protein secondary structure.« less

  18. Thin-film hermeticity - A quantitative analysis of diamondlike carbon using variable angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Orzeszko, S.; De, Bhola N.; Woollam, John A.; Pouch, John J.; Alterovitz, Samuel A.

    1988-01-01

    This paper reports on the successful application of variable-angle spectroscopic ellipsometry to quantitative thin-film hermeticity evaluation. It is shown that, under a variety of film preparations and moisture introduction conditions, water penetrates only a very thin diamondlike carbon (DLC) top surface-roughness region. Thus, DLC is an excellent candidate for use as protective coatings in adverse chemical and aqueous environments.

  19. Parametrization of optical properties of indium-tin-oxide thin films by spectroscopic ellipsometry: Substrate interfacial reactivity

    NASA Astrophysics Data System (ADS)

    Losurdo, M.; Giangregorio, M.; Capezzuto, P.; Bruno, G.; de Rosa, R.; Roca, F.; Summonte, C.; Plá, J.; Rizzoli, R.

    2002-01-01

    Indium-tin-oxide (ITO) films deposited by sputtering and e-gun evaporation on both transparent (Corning glass) and opaque (c-Si, c-Si/SiO2) substrates and in c-Si/a-Si:H/ITO heterostructures have been analyzed by spectroscopic ellipsometry (SE) in the range 1.5-5.0 eV. Taking the SE advantage of being applicable to absorbent substrate, ellipsometry is used to determine the spectra of the refractive index and extinction coefficient of the ITO films. The effect of the substrate surface on the ITO optical properties is focused and discussed. To this aim, a parametrized equation combining the Drude model, which considers the free-carrier response at the infrared end, and a double Lorentzian oscillator, which takes into account the interband transition contribution at the UV end, is used to model the ITO optical properties in the useful UV-visible range, whatever the substrate and deposition technique. Ellipsometric analysis is corroborated by sheet resistance measurements.

  20. Multichannel Spectroscopic Ellipsometry for CdTe Photovoltaics: from Materials and Interfaces to Solar Cells

    NASA Astrophysics Data System (ADS)

    Koirala, Prakash

    Spectroscopic ellipsometry (SE) in the mid-infrared to ultraviolet range has been implemented in order to develop and evaluate optimization procedures for CdTe solar cells at the different stages of fabrication. In this dissertation research, real time SE (RT-SE) has been applied during the fabrication of the as-deposited CdS/CdTe solar cell. Two areas of background research were addressed before undertaking the challenging RT-SE analysis procedures. First, optical functions were parameterized versus temperature for the glass substrate and its overlayers, including three different SnO2 layers. This database has applications not only for RT-SE analysis but also for on-line monitoring of the coated glass itself at elevated temperature. Second, post-deposition modifications of substrate have been studied by infrared spectroscopic ellipsometry (IR-SE) prior to the RT-SE analysis in order to evaluate the need for such modification in the analysis. With support from these background studies, RT-SE has been implemented in analyses of the evolution of the thin film structural properties during sputter deposition of polycrystalline CdS/CdTe solar cells on the transparent conducting oxide (TCO) coated glass substrates. The real time optical spectra collected during CdS/CdTe deposition were analyzed using the optical property database for all substrate components as a function of measurement temperature. RT-SE enables characterization of the filling process of the surface roughness modulations on the top-most SnO2 substrate layer, commonly referred to as the high resistivity transparent (HRT) layer. In this filling process, the optical properties of this surface layer are modified in accordance with an effective medium theory. In addition to providing information on interface formation to the substrate during film growth, RT-SE also provides information on the bulk layer CdS growth, its surface roughness evolution, as well as overlying CdTe interface formation and bulk layer

  1. Modeled optical properties of SiGe and Si layers compared to spectroscopic ellipsometry measurements

    NASA Astrophysics Data System (ADS)

    Kriso, C.; Triozon, F.; Delerue, C.; Schneider, L.; Abbate, F.; Nolot, E.; Rideau, D.; Niquet, Y.-M.; Mugny, G.; Tavernier, C.

    2017-03-01

    The optical response of strained SiGe alloys, as well as thin Si layers, is analyzed using a sp3d5s∗ tight-binding model within the independent particle approximation. The theoretical results are compared to measurements obtained on samples with various Ge content and layer thicknesses. The dielectric function is extracted from spectroscopic ellipsometry allowing a separation of its real and imaginary parts. Theory and simulation show similar trends for the variation of the dielectric function of SiGe with varying Ge content. Variations are also well reproduced for thin Si layers with varying thickness and are attributed to quantum confinement.

  2. Electronic and structural properties of molybdenum thin films as determined by real-time spectroscopic ellipsometry

    SciTech Connect

    Walker, J. D.; Khatri, H.; Ranjan, V.; Li Jian; Collins, R. W.; Marsillac, S.

    2009-04-06

    Real-time spectroscopic ellipsometry (RTSE) is shown to be an effective contactless probe of radio frequency magnetron sputtered molybdenum thin films used as the back electrode in chalcopyrite [Cu(In,Ga)Se{sub 2}] solar cells. A series of Mo thin films was sputtered onto soda-lime glass substrates at Ar pressures ranging from 4 to 20 mTorr. RTSE measurements reveal how Ar pressure affects the nucleation and growth mechanisms that influence the films' ultimate grain structure and properties. Determinations of the free electron relaxation times at optical frequencies reveal that higher pressures lead to a smaller average grain size and increased void volume fraction.

  3. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment.

    PubMed

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; Bittrich, Eva; Rauch, Sebastian; Uhlmann, Petra; Eichhorn, Klaus-Jochen; Seeber, Michael; Luzinov, Igor; Kilbey, S Michael; Lokitz, Bradley S; Minko, Sergiy; Hinrichs, Karsten

    2015-06-17

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes containing poly(N-isopropylacrylamide) and poly(acrylic acid) with high potential for biosensing and biomedical applications are studied by in situ infrared-spectroscopic ellipsometry (IRSE). IRSE is a highly sensitive nondestructive technique that allows protein adsorption on polymer brushes to be investigated in an aqueous environment as external stimuli, such as temperature and pH, are varied. These changes are relevant to conditions for regulation of protein adsorption and desorption for biotechnology, biocatalysis, and bioanalytical applications. Here brushes are used as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. The important finding of this work is that IRSE in the in situ experiments in protein solutions can distinguish between contributions of polymer brushes and proteins. The vibrational bands of the polymers provide insights into the hydration state of the brushes, whereas the protein-specific amide bands are related to changes of the protein secondary structure.

  4. Spectroscopic ellipsometry investigations of the optical properties of manganese doped bismuth vanadate thin films

    SciTech Connect

    Kumari, Neelam; Krupanidhi, S.B.; Varma, K.B.R.

    2010-04-15

    The optical properties of Bi{sub 2}V{sub 1-x}Mn{sub x}O{sub 5.5-x} {l_brace}x = 0.05, 0.1, 0.15 and 0.2 at.%{r_brace} thin films fabricated by pulsed laser deposition on platinized silicon substrates were studied in UV-visible spectral region (1.51-4.17 eV) using spectroscopic ellipsometry. The optical constants and thicknesses of these films have been obtained by fitting the ellipsometric data ({Psi} and {Delta}) using a multilayer four-phase model system and a relaxed Lorentz oscillator dispersion relation. The surface roughness and film thickness obtained by spectroscopic ellipsometry were found to be consistent with the results obtained by atomic force and scanning electron microscopy. The refractive index measured at 650 nm does not show any marginal increase with Mn content. Further, the extinction coefficient does not show much decrease with increasing Mn content. An increase in optical band gap energy from 2.52 to 2.77 eV with increasing Mn content from x = 0.05 to 0.15 was attributed to the increase in oxygen ion vacancy disorder.

  5. The optical characterization of organometallic complex thin films by spectroscopic ellipsometry and photovoltaic diode application

    SciTech Connect

    Özaydın, C.; Güllü, Ö.; Pakma, O.; Ilhan, S.; Akkılıç, K.

    2016-05-15

    Highlights: • Optical properties and thickness of the A novel organometallic complex (OMC) film were investigated by spectroscopic ellipsometry (SE). • Au/OMC/n-Si metal/interlayer/semiconductor (MIS) diode has been fabricated • This paper presents the I–V analysis of Au/OMC/n-Si MIS diode. • Current–voltage and photovoltaic properties of the diode were investigated. - Abstract: In this work, organometallic complex (OMC) films have been deposited onto glass or silicon substrates by spin coating technique and their photovoltaic application potential has been investigated. Optical properties and thickness of the film have been investigated by spectroscopic ellipsometry (SE). Also, transmittance spectrum has been taken by UV/vis spectrophotometer. The optical method has been used to determine the band gap value of the films. Also, Au/OMC/n-Si metal/interlayer/semiconductor (MIS) diode has been fabricated. Current–voltage and photovoltaic properties of the structure were investigated. The ideality factor (n) and barrier height (Φ{sub b}) values of the diode were found to be 2.89 and 0.79 eV, respectively. The device shows photovoltaic behavior with a maximum open-circuit voltage of 396 mV and a short circuit current of 33.8 μA under 300 W light.

  6. Spectroscopic imaging ellipsometry: real-time measurement of single, intact wood pulp fibers

    NASA Astrophysics Data System (ADS)

    Ye, Chun

    2006-12-01

    A nondestructive method based on spectroscopic ellipsometry has been developed and demonstrated for the real-time measurement of a single pulp fiber's microfibril angle and phase retardation, with the latter proportional to the cell wall thickness. The method uses an optical arrangement insensitive to the sample's orientation in combination with a proper spectral analysis of the sample's image. The optical arrangement and the measurement principle of the method are described. To test the new method, equipment functioning as a spectroscopic imaging ellipsometer was constructed according to the arrangement, and measurements were carried out in which single pulp fibers and ordinary wave plates were measured. The test measurements and results are described and presented.

  7. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; Del Río, J. Antonio; Tagüeña-Martínez, Julia

    2016-04-01

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications.

  8. In-situ spectroscopic ellipsometry study of copper selective-area atomic layer deposition on palladium

    SciTech Connect

    Jiang, Xiaoqiang; Wang, Han; Qi, Jie; Willis, Brian G.

    2014-07-01

    Selective area copper atomic layer deposition on palladium seed layers has been investigated with in-situ real-time spectroscopic ellipsometry to probe the adsorption/desorption and reaction characteristics of individual deposition cycles. The reactants are copper bis(2,2,6,6-tetramethyl-3,5-heptanedionate) vapor and hydrogen gas. Self-limiting atomic layer deposition was observed in the temperature range of 135–230 °C in a low pressure reactor. Under optimal conditions, growth occurs selectively on palladium and not on silicon dioxide or silicon nitride layers. Based on in-situ ellipsometry data and supporting experiments, a new mechanism for growth is proposed. In the proposed mechanism, precursor adsorption is reversible, and dissociatively adsorbed hydrogen are the stable surface intermediates between growth cycles. The mechanism is enabled by continuous diffusion of palladium from the seed layer into the deposited copper film and strong H* binding to palladium sites. Less intermixing can be obtained at low growth temperatures and short cycle times by minimizing Cu/Pd inter-diffusion.

  9. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry

    PubMed Central

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; del Río, J. Antonio; Tagüeña-Martínez, Julia

    2016-01-01

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications. PMID:27097767

  10. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry.

    PubMed

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; del Río, J Antonio; Tagüeña-Martínez, Julia

    2016-04-21

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications.

  11. Probing initial-stages of ALD growth with dynamic in situ spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Muneshwar, Triratna; Cadien, Ken

    2015-02-01

    The initial stages of ALD surface reactions are probed using dynamic in situ spectroscopic ellipsometry (d-iSE) technique during plasma-enhanced ALD of zirconium nitride (ZrN) thin films in spectral range of 0.73-6.4 eV. The measured change in the ellipsometry parameter Δ, with every precursor (TDMAZr) and reactant (forming gas plasma) exposure is interpreted as the combined effect of film growth and change in surface chemistry during ALD. We present application of Bruggeman's effective-medium approximation (B-EMA) in the analysis of d-iSE data to determine fractional surface coverage (θ) of ALD grown film at the end of every deposition cycle. During the deposition of first few ZrN monolayers, d-iSE datasets are analyzed on the basis of surface diffusion enhanced ALD growth, where the surface adsorbed precursor molecules can diffuse over substrate surface to occupy energetically favorable surface sites. The determined surface coverage of ZrN films highlights the effects of substrate enhanced ALD growth.

  12. Growth of vacuum evaporated ultraporous silicon studied with spectroscopic ellipsometry and scanning electron microscopy

    NASA Astrophysics Data System (ADS)

    Kaminska, Kate; Amassian, Aram; Martinu, Ludvik; Robbie, Kevin

    2005-01-01

    Using a combination of variable-angle spectroscopic ellipsometry and scanning electron microscopy, we investigated the scaling behavior of uniaxially anisotropic, ultraporous silicon manufactured with glancing angle deposition. We found that both the diameter of the nanocolumns and the spacing between them increase with film thickness according to a power-law relationship consistent with self-affine fractal growth. An ellipsometric model is proposed to fit the optical properties of the anisotropic silicon films employing an effective medium approximation mixture of Tauc-Lorentz oscillator and void. This study shows that the optical response of silicon films made at glancing incidence differs significantly from that of amorphous silicon prepared by other methods due to highly oriented nanocolumn formation and power-law scaling.

  13. Characterization of the Refractive Index of Strained GaInNAs Layers by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Kitatani, Takeshi; Kondow, Masahiko; Shinoda, Kazunori; Yazawa, Yoshiaki; Okai, Makoto

    1998-03-01

    We have characterized the refractive index of strained GaInNAs layers. Using spectroscopic ellipsometry (SE), the variation in optical constants of GaInNAs layers, about 6 nm thick with a nitrogen content lower than 1%, can be clearly observed. Analysis of the SE data, including the strain effect in the layer, clarified that the refractive index of GaInNAs increases in proportion to the nitrogen content. While the trend for increase in refractive index with a decrease in the bandgap energy is the same as that observed in conventional III V alloy semiconductors, the rate of increase is found to be much larger than that in GaInAs. This result suggests a large density of states in the conduction band characteristics of this type of material system that includes nitrogen atoms.

  14. Determination of the optical functions of transparent glasses by using spectroscopic ellipsometry

    SciTech Connect

    Jellison, G.E. Jr.; Sales, B.C. )

    1991-10-20

    Two-channel spectroscopic polarization-modulation ellipsometry measurements have been made on four different glasses (fused SiO{sub 2}, fine-annealed BK-7, a lead-indium-phosphate glass, and a germanium-arsenic-selenium glass). We show that this technique is sensitive to thin surface layers and that these surface layers can be modeled by using the Bruggeman effective-medium theory with 50% glass and 50% voids. By correcting the experimental spectra for these surface layers, we determined the refractive index of the sample within an error of {plus minus}0.002 in the transparent region. For wavelength regions where the material is normally opaque, the ellipsometric data can be corrected for this overlayer, thereby increasing the accuracy of the determination of both the refractive index and the extinction coefficient.

  15. Rapid, non-destructive evaluation of ultrathin WSe{sub 2} using spectroscopic ellipsometry

    SciTech Connect

    Eichfeld, Sarah M.; Lin, Yu-Chuan; Hossain, Lorraine; Eichfeld, Chad M.; Robinson, Joshua A.

    2014-09-01

    The utilization of tungsten diselenide (WSe{sub 2}) in electronic and optoelectronic devices depends on the ability to understand and control the process-property relationship during synthesis. We demonstrate that spectroscopic ellipsometry is an excellent technique for accurate, non-destructive determination of ultra-thin (<30 nm) WSe{sub 2} properties. The refractive index (n) and extinction coefficient (k) were found to be independent of thickness down to 1.3 nm, and were used to determine film thickness, which was confirmed to be within 9% of values found via atomic force microscopy. Finally, the optical bandgap was found to closely correlate with thickness, ranging from 1.2 to 1.55 eV as the WSe{sub 2} is thinned to the equivalent of 2 atomic layers.

  16. Modeling the transport properties of epitaxially grown thermoelectric oxide thin films using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Sarath Kumar, S. R.; Abutaha, Anas I.; Hedhili, M. N.; Alshareef, H. N.

    2012-01-01

    The influence of oxygen vacancies on the transport properties of epitaxial thermoelectric (Sr,La)TiO3 thin films is determined using electrical and spectroscopic ellipsometry (SE) measurements. Oxygen vacancy concentration was varied by ex-situ annealing in Ar and Ar/H2. All films exhibited degenerate semiconducting behavior, and electrical conductivity decreased (258-133 S cm-1) with increasing oxygen content. Similar decrease in the Seebeck coefficient is observed and attributed to a decrease in effective mass (7.8-3.2 me), as determined by SE. Excellent agreement between transport properties deduced from SE and direct electrical measurements suggests that SE is an effective tool for studying oxide thin film thermoelectrics.

  17. Optical characteristics of pulsed laser deposited Ge-Sb-Te thin films studied by spectroscopic ellipsometry

    SciTech Connect

    Nemec, P.; Prikryl, J.; Frumar, M.; Nazabal, V.

    2011-04-01

    Pulsed laser deposition technique was used for the fabrication of (GeTe){sub 1-x}(Sb{sub 2}Te{sub 3}){sub x} (x = 0, 0.33, 0.50, 0.66, and 1) amorphous thin films. Scanning electron microscopy with energy-dispersive x-ray analysis, x-ray diffraction, optical reflectivity, and sheet resistance temperature dependences as well as variable angle spectroscopic ellipsometry measurements were used to characterize as-deposited (amorphous) and annealed (rocksaltlike) layers. In order to extract optical functions of the films, the Cody-Lorentz model was applied for the analysis of ellipsometric data. Fitted sets of Cody-Lorentz model parameters are discussed in relation with chemical composition and the structure of the layers. The GeTe component content was found to be responsible for the huge optical functions and thickness changes upon amorphous-to-fcc phase transition.

  18. Mixed polarization in determining the film thickness of a silicon sphere by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Zhang, Ji-Tao; Wu, Xue-Jian; Li, Yan

    2012-01-01

    The effect of a spherical shape on the measurement result of spectroscopic ellipsometry (SE) is analyzed, and a method to eliminate this effect is proposed. Based on the simulation result of the SE measurement on a silicon sphere by ray tracking, we find that the sphere makes the parallel incident beam of the SE be divergent after reflection, and the measurement error of the SE caused by this phenomenon is explained by the mixed polarization theory. By settling an aperture in front of the detector of the SE, we can almost eliminate the error. For the silicon sphere with a diameter of 94 mm used in the Avogadro project, the thickness error of the oxide layer caused by the spherical shape can be reduced from 0.73 nm to 0.04 nm by using the proposed method. The principle of the method and the results of the experimental verification are presented.

  19. Spectroscopic ellipsometry study of Cu{sub 2}ZnSnSe{sub 4} bulk crystals

    SciTech Connect

    León, M. Lopez, N.; Merino, J. M.; Caballero, R.; Levcenko, S.; Gurieva, G.; Serna, R.; Bodnar, I. V.; Nateprov, A.; Guc, M.; Arushanov, E.; Schorr, S.; Perez-Rodriguez, A.

    2014-08-11

    Using spectroscopic ellipsometry we investigated and analyzed the pseudo-optical constants of Cu{sub 2}ZnSnSe{sub 4} bulk crystals, grown by the Bridgman method, over 0.8–4.5 eV photon energy range. The structures found in the spectra of the complex pseudodielectric functions were associated to E{sub 0}, E{sub 1A}, and E{sub 1B} interband transitions and were analyzed in frame of the Adachi's model. The interband transition parameters such as strength, threshold energy, and broadening were evaluated by using the simulated annealing algorithm. In addition, the pseudo-complex refractive index, extinction coefficient, absorption coefficient, and normal-incidence reflectivity were derived over 0.8–4.5 eV photon energy range.

  20. Spectroscopic ellipsometry for anisotropic nano-layered Al/SiO2 metamaterial with hyperbolic dispersion

    NASA Astrophysics Data System (ADS)

    Kelly, Priscilla; Martin, Andrew C.; Kuznetsova, Lyuba

    2016-09-01

    A special class of nano-layered hyperbolic metamaterials (HMMs) has received special attention recently due to their unique optical property, namely that the dispersion of the dielectric constant for HMMs exhibits a topological transition in the iso-frequency surface from an ellipsoid to a hyperboloid. Using aluminum in metal-dielectric nano-layered structures offers several advantages over currently used noble metals. The plasma frequency of the aluminum is higher than that of gold or silver. As a result, aluminum exhibits metallic characteristics over a broader spectral range than gold and silver. In addition, SiO2 is used as the dielectric for this hyperbolic metamaterial because it could be easily integrated into current CMOS technology and has near-zero losses in the UV region. In this investigation, we use generalized spectroscopic ellipsometry to study the distribution of Al within nano-layered samples fabricated using the RF sputtering technique under varying fabrication parameters with a goal of achieving hyperbolic dispersion. In our work, we developed an approach to analyzing generalized spectroscopic ellipsometry data for anisotropic Al/SiO2 structures with strong absorption, which uses the 4x4 transfer matrix approach, also known as the Berreman-formalism. This developed approach allows obtaining permittivity in all three dimensions and importing theoretical permittivity models which are tailored to the Al/SiO2 material's optical and electrical properties. In this work, we investigate the methods of reducing Al oxidation during fabrication by means of varying the fabrication temperatures and pressure by fitting data from RC2 Ellipsometer (A.C. Woollam Co.), which has dual rotating compensators. Applications for this Al/SiO2 hyperbolic metamaterial will also be discussed.

  1. Mid-infrared spectroscopic investigation

    NASA Technical Reports Server (NTRS)

    Salisbury, John W.; Vergo, Norma; Walter, Louis

    1987-01-01

    Mid-infrared spectroscopic research efforts are discussed. The development of a new instrumentation to permit advanced measurements in the mid-infrared region of the spectrum, the development of a special library of well-characterized mineral and rock specimens for interpretation of remote sensing data, and cooperative measurements of the spectral signatures of analogues of materials that may be present on the surfaces of asteroids, planets or their Moons are discussed.

  2. Study of the Dielectric Function of Graphene from Spectroscopic Ellipsometry and Electron Energy Loss Spectroscopy

    NASA Astrophysics Data System (ADS)

    Nelson, Florence

    For more than 60 years, semiconductor research has been advancing up the periodic table. The first transistor was made from germanium. This later gave way to silicon-based devices due to the latter's ability to form an excellent interface with thermally-grown oxide. Now for the last ˜8 years, the focus has moved up one more row to carbon for post-CMOS devices in order to comply with the scaling limitations of Moore's law. However, for each of these, the measurements of film properties and dimensions have always been required for technological applications. These measurement methods often incorporate the use of light or electrons in order to take advantage of a wavelength that is on the order of, or smaller than, the feature sizes of interest. This thesis compares the dielectric function of graphene measured by an optical method to that obtained from an electron energy loss method in order to observe the effect of contamination and substrate on the optical properties of graphene exposed to the environment. Whether viewed in terms of how light affects a material (dielectric function) or how a material affects light (refractive index), the optical response is a quantity that may be used to obtain information about a film's thickness, energy structure, and the types of excitations that are responsible for energy loss. The three main experimental methods used in this thesis work are spectroscopic ellipsometry (SE), scanning transmission electron microscopy (STEM), and electron energy loss spectroscopy (EELS). SE is commonly used in clean-room environments for optical measurement over the energy range of ˜0-5 eV. This method is used to study graphene's dielectric function from the ultraviolet (UV) through infrared (IR) regions through use of an oscillator dispersion model. A nearly constant absorbance over the IR and into the visible region is observed due to vertical transitions between graphene's linearly dispersed pi-bands at the Dirac points. An exciton

  3. Absorption properties of type-II InAs/InAsSb superlattices measured by spectroscopic ellipsometry

    SciTech Connect

    Webster, P. T.; Riordan, N. A.; Liu, S.; Zhang, Y.-H.; Johnson, S. R.; Steenbergen, E. H.

    2015-02-09

    Strain-balanced InAs/InAsSb superlattices offer access to the mid- to long-wavelength infrared region with what is essentially a ternary material system at the GaSb lattice constant. The absorption coefficients of InAs/InAsSb superlattices grown by molecular beam epitaxy on (100)-oriented GaSb substrates are measured at room temperature over the 30 to 800 meV photon energy range using spectroscopic ellipsometry, and the miniband structure of each superlattice is calculated using a Kronig-Penney model. The InAs/InAsSb conduction band offset is used as a fitting parameter to align the calculated superlattice ground state transition energy to the measured absorption onset at room temperature and to the photoluminescence peak energy at low temperature. It is observed that the ground state absorption coefficient and transition strength are proportional to the square of the wavefunction overlap and the ground state absorption coefficient approaches a maximum value of around 5780 cm{sup −1} as the wavefunction overlap approaches 100%. The absorption analysis of these samples indicates that the optical joint density of states is weakly dependent on the period thickness and Sb content of the superlattice, and that wavefunction overlap is the principal design parameter in terms of obtaining strong absorption in these structures.

  4. Combined atomic force microscopy and spectroscopic ellipsometry applied to the analysis of lipid-protein thin films.

    PubMed

    Finot, Eric; Markey, Laurent; Hane, Francis; Amrein, Mathias; Leonenko, Zoya

    2013-04-01

    Pulmonary surfactant is a complex mixture of phospholipids and proteins and forms a thin film at the lung alveolar interface separating air from liquid environment. The film reduces the work of breathing during repeatable compressions of the alveoli which form a characteristic multilayer upon compression. In this work, we investigated the structure of bovine lipid extract surfactant (BLES). We analysed the BLES films by atomic force microscopy (AFM) and spectroscopic ellipsometry (SE) in order to provide combined characterization of both morphology and thickness of surfactant films. We show how the spectroscopic ellipsometry can be used to supplement the data obtained by AFM. We demonstrate that indium tin oxide (ITO) substrate used for spectroscopic ellipsometry is preferable over glass substrate to enhance the optical contrast. An optical model was proposed to account for non-uniform film morphology. We obtained good correlations between the multilayer surface coverage, determined by both AFM and SE. SE measures the thickness of the first uniform monolayer as 2.6 nm that cannot be achieved by AFM imaging alone.

  5. In situ spectroscopic ellipsometry during electrochemical treatment of zinc in alkaline carbonate electrolyte

    NASA Astrophysics Data System (ADS)

    Chen, Ying; Erbe, Andreas

    2013-01-01

    In situ spectroscopic ellipsometry (SE, 297-820 nm, 4.4-1.5 eV) during electrochemical oxidation/reduction of zinc in alkaline carbonate electrolyte was performed using a specially designed optical-electrochemical cell. The growth and shrinkage of the interfacial layer on Zn was analysed on the basis of Lekner's first order perturbation theory. For non-absorbing thin films on metal surfaces, an algorithm has been derived to extract the thickness of a surface film directly from ellipsometric data without the need of optical modelling. During cyclic voltammetry (CV), a rapid decrease/increase in the layer thickness in the reduction/oxidation peak has been found. In the potential regime where the surface is oxide-covered, the layer thickness increases/decreases linearly with potential in anodic/cathodic scans. The density of the interfacial region in this regime is constant. During chronoamperometric experiments, a fast correlating jump in thickness was found after potential jumps. An ageing of the films is observed in the absorption spectrum (from the ellipsometric parameter Ψ), which shows changes until ≈ 30 min after potential jumps. Analysis of the current transients points to continuous dissolution of Zn.

  6. Optical properties of Yeast Cytochrome c monolayer on gold: an in situ spectroscopic ellipsometry investigation.

    PubMed

    Toccafondi, Chiara; Prato, Mirko; Maidecchi, Giulia; Penco, Amanda; Bisio, Francesco; Cavalleri, Ornella; Canepa, Maurizio

    2011-12-01

    The adsorption of Yeast Cytochrome c (YCC) on well defined, flat gold substrates has been studied by Spectroscopic Ellipsometry (SE) in the 245-1000 nm wavelength range. The investigation has been performed in aqueous ambient at room temperature, focusing on monolayer-thick films. In situ δΨ and δΔ difference spectra have shown reproducibly well-defined features related to molecular optical absorptions typical of the so-called heme group. The data have been reproduced quantitatively by a simple isotropic optical model, accounting for the molecular absorption spectrum and film-substrate interface effects. The simulations allowed a reliable estimate of the film thickness and the determination of the position and the shape of the so-called Soret absorption peak that, within the experimental uncertainty, is the same found for molecules in liquid. These findings suggest that YCC preserves its native structure upon adsorption. The same optical model was able to reproduce also ex situ results on rinsed and dried samples, dominated by the spectral features associated to the polypeptide chain that tend to overwhelm the heme absorption features.

  7. New method for determination of the photoresist Dill parameters using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.

    1999-04-01

    In this paper a new method to determine photoresist Dill parameters is presented. Based on spectroscopic ellipsometry (SE) measurements, this new method is more precise than standard techniques based on transmittance measurements. Indeed, compared to photometry, SE technique is a self calibrated technique which provide directly two independent parameters Tan (Psi) and Cos (Delta) which can be used to extract directly thickness but also optical indices of a layer inside a multilayer structure. Moreover, the wavelength dependence introduces more restrictions for the data analysis since thickness and optical indices can be deduced directly in many cases. We apply this technique to different kinds of photoresist designed for 365nm and 248nm. At each wavelength ellipsometric parameters are simulated directly versus the exposure dose without any assumption on the thickness and on the index of refraction evolution. On 365nm photoresist this new method provides Dill parameters in good agreement with the standard method. On 248nm photoresist we show that the influence of the exposure is more important on the refractive index and on the thickness of the layer than on its absorption.

  8. New method for determination of the photoresist Dill parameters using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.

    1999-06-01

    In this paper a new method to determine photoresist DIll parameters is presented. Based on spectroscopic ellipsometry (SE) measurements, this new method is more precise than standard techniques based on transmittance measurements. Indeed, compared to photometry, SE technique is a self calibrated technique which provide directly two independent parameters Tan (Psi) and Cos (Delta) which can be used to extract directly thickness but also optical indices of a layer inside a multilayer structure. Moreover, the wavelength dependence introduces more restrictions for the data analysis since thickness and optical indices can be deduced directly in many cases. We apply this technique to different kinds of photoresist designed for 365nm and 248nm. At each wavelength ellipsometric parameters are simulate directly versus the exposure dose without any assumption on the thickness and on the index of refraction evolution. On 365nm photoresist this new method provides Dill parameters in good agreement with the standard method. On 248nm photoresist we show that the influence of the exposure is more important on the refractive index and on the thickness of the layer than on its absorption.

  9. Silicon fin line edge roughness determination and sensitivity analysis by Mueller matrix spectroscopic ellipsometry based scatterometry

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya; O'Mullane, Samuel; Sunkoju, Sravan; Hosler, Erik R.; Kamineni, Vimal; Preil, Moshe; Keller, Nick; Race, Joseph; Muthinti, Gangadhara Raja; Diebold, Alain C.

    2015-03-01

    Measurement and control of line edge roughness (LER) is one of the most challenging issues facing patterning technology. As the critical dimensions (CD) of patterned structures decrease, LER of only a few nanometers can negatively impact device performance. Here, Mueller matrix spectroscopic ellipsometry (MMSE) based scatterometry is used to determine LER in periodic line-space structures in 28 nm pitch Si fin samples fabricated by directed selfassembly (DSA) patterning. The optical response of the Mueller matrix (MM) elements is influenced by structural parameters like pitch, CD, height, and side-wall angle (SWA), as well as the optical properties of the materials. Evaluation and decoupling MM element response to LER from other structural parameters requires sensitivity analysis using simulations of optical models that include LER. Here, an approach is developed that quantifies Si fin LER by comparing the optical responses generated by systematically varying the grating shape and measurement conditions. Finally, the validity of this approach is established by comparing the results obtained from top down scanning electron microscope (SEM) images and cross-sectional TEM image of the 28 nm pitch Si fins.

  10. B-spline parametrization of the dielectric function applied to spectroscopic ellipsometry on amorphous carbon

    SciTech Connect

    Weber, J. W.; Hansen, T. A. R.; Sanden, M. C. M. van de; Engeln, R.

    2009-12-15

    The remote plasma deposition of hydrogenated amorphous carbon (a-C:H) thin films is investigated by in situ spectroscopic ellipsometry (SE). The dielectric function of the a-C:H film is in this paper parametrized by means of B-splines. In contrast with the commonly used Tauc-Lorentz oscillator, B-splines are a purely mathematical description of the dielectric function. We will show that the B-spline parametrization, which requires no prior knowledge about the film or its interaction with light, is a fast and simple-to-apply method that accurately determines thickness, surface roughness, and the dielectric constants of hydrogenated amorphous carbon thin films. Analysis of the deposition process provides us with information about the high deposition rate, the nucleation stage, and the homogeneity in depth of the deposited film. Finally, we show that the B-spline parametrization can serve as a stepping stone to physics-based models, such as the Tauc-Lorentz oscillator.

  11. Spectroscopic ellipsometry as a process control tool for manufacturing cadmium telluride thin film photovoltaic devices

    NASA Astrophysics Data System (ADS)

    Smith, Westcott P.

    In recent decades, there has been concern regarding the sustainability of fossil fuels. One of the more promising alternatives is Cadmium Telluride (CdTe) thin-film photovoltaic (PV) devices. Improved quality measurement techniques may aid in improving this existing technology. Spectroscopic ellipsometry (SE) is a common, non-destructive technique for measuring thin films in the silicon wafer industry. SE results have also been tied to properties believed to play a role in CdTe PV device efficiency. A study assessing the potential of SE for use as a quality measurement tool had not been previously reported. Samples of CdTe devices produced by both laboratory and industrial scale processes were measured by SE and Scanning Electron Microscopy (SEM). Mathematical models of the optical characteristics of the devices were developed and fit to SE data from multiple angles and locations on each sample. Basic statistical analysis was performed on results from the automated fits to provide an initial evaluation of SE as a quantitative quality measurement process. In all cases studied, automated SE models produced average stack thickness values within 10% of the values produced by SEM, and standard deviations for the top bulk layer thickness were less than 1% of the average values.

  12. Vanadium oxide-carbon nanotube composite films characterized by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    He, Qiong; Xu, Xiangdong; Gu, Yu; Wang, Meng; Yao, Jie; Jiang, Yadong; Sun, Minghui; Ao, Tianhong; Lian, Yuxiang; Wang, Fu; Li, Xinrong

    2016-10-01

    Spectroscopic ellipsometry (SE) is utilized to characterize the vanadium oxide (VO x )-single walled carbon nanotube (SWCNT) composite films prepared by sol-gel. Five Tauc-Lorentz oscillators model is employed to describe the dispersions in the optical responses of VO x and VO x -SWCNT thin films. Results reveal that if the SWCNT concentration in the composite film is increased, the refractive index is decreased, while the extinction coefficient is increased. Moreover, higher SWCNT content leads to lower optical band gap (E g) but larger localized state (E e). Interestingly, both E g and E e values reach saturated at a SWCNT content of ~8 wt%. Particularly, the peak transition energies of the 5 Tauc-Lorentz oscillators have been assigned to the specific transitions according to the band structures of VO x . This work reveals the feasibility of investigating the optical properties and microstructures of VO x -SWCNT composite films by SE. These experimental results will be helpful for better understanding the VO x -SWCNT composite films, and promoting future characterizations of other SWCNT-based composites by SE.

  13. In situ optical characterizations of the annealing effects upon SnO2:F films by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Yuan, Guangzhong; Wang, Kangkai; Li, Ming; Gao, Qian; Liu, Yong; Jia, Shaohui; Song, Chenlu; Han, Gaorong

    2016-10-01

    In situ study of the annealing effects, up to 600 °C, upon the optical performance of SnO2:F films have been successfully conducted with spectroscopic ellipsometry. The thickness and optical parameters were obtained by the regression of the measured ellipsometry parameters using a five-layer model. The results show that the re-densification of the SnO2:F layers occurs at above 200 °C, resulting in an irreversible thickness reducing from about 326 nm to about 321 nm. The refractive index of the SnO2:F layer increases with temperature and decreases in the cooling period. The in situ temperature dependence of the average refractive index has a good agreement with the sheet resistance measurement results, not only verifying the annealing process deteriorates the low-emissivity performance, but also demonstrates that spectroscopic ellipsometry method is a suitable optical characterization technique to adjust the on-line coating process of float glass.

  14. Spectroscopic ellipsometry and polarimetry for materials and systems analysis at the nanometer scale: state-of-the-art, potential, and perspectives

    PubMed Central

    Bergmair, Michael; Bruno, Giovanni; Cattelan, Denis; Cobet, Christoph; de Martino, Antonello; Fleischer, Karsten; Dohcevic-Mitrovic, Zorana; Esser, Norbert; Galliet, Melanie; Gajic, Rados; Hemzal, Dušan; Hingerl, Kurt; Humlicek, Josef; Ossikovski, Razvigor; Popovic, Zoran V.; Saxl, Ottilia

    2009-01-01

    This paper discusses the fundamentals, applications, potential, limitations, and future perspectives of polarized light reflection techniques for the characterization of materials and related systems and devices at the nanoscale. These techniques include spectroscopic ellipsometry, polarimetry, and reflectance anisotropy. We give an overview of the various ellipsometry strategies for the measurement and analysis of nanometric films, metal nanoparticles and nanowires, semiconductor nanocrystals, and submicron periodic structures. We show that ellipsometry is capable of more than the determination of thickness and optical properties, and it can be exploited to gain information about process control, geometry factors, anisotropy, defects, and quantum confinement effects of nanostructures. PMID:21170135

  15. Corrosion under argon irradiation of titanium in the low MeV range: A study coupling AFM and Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Do, Ngoc-Long; Garcia-Caurel, Enric; Bérerd, Nicolas; Moncoffre, Nathalie; Gorse-Pomonti, Dominique

    2014-05-01

    This paper reports on a recent study of the corrosion under argon ion irradiation of titanium in the low MeV range (1-9 MeV), associating AFM and Spectroscopic Ellipsometry. Irradiation with MeV Arn+ (n = 1, 3) ions produces damages on the titanium surface. Large craters form on the oxidized titanium surface whose characteristics vary as a function of the argon energy between 2 and 9 MeV. The superficial oxide grows thicker under irradiation over the same energy range, especially near 3 MeV. It is suggested that collisions cascades play a significant role in the overall damage process.

  16. Analysis and optimization of thin film photovoltaic materials and device fabrication by real time spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Li, Jian; Stoke, Jason A.; Podraza, Nikolas J.; Sainju, Deepak; Parikh, Anuja; Cao, Xinmin; Khatri, Himal; Barreau, Nicolas; Marsillac, Sylvain; Deng, Xunming; Collins, Robert W.

    2007-09-01

    Methods of spectroscopic ellipsometry (SE) have been applied to investigate the growth and properties of the material components used in the three major thin film photovoltaics technologies: (1) hydrogenated silicon (Si:H); (2) cadmium telluride (CdTe); and (3) copper indium-gallium diselenide (CuIn 1-xGa xSe2 or CIGS). In Si:H technology, real time SE (RTSE) has been applied to establish deposition phase diagrams that describe very high frequency (vhf) plasmaenhanced chemical vapor deposition (PECVD) processes for hydrogenated silicon (Si:H) and silicon-germanium alloy (Si 1-xGe x:H) thin films. This study has reaffirmed that the highest efficiencies for a-Si:H and a-Si 1-xGe x:H component solar cells of multijunction devices are obtained when the i-layers are prepared under maximal H II dilution conditions. In CdTe technology, the magnetron sputter deposition of polycrystalline CdTe, CdS, and CdTe 1-xS x thin films as well as the formation of CdS/CdTe and CdTe/CdS heterojunctions has been studied. The nucleation and growth behaviors of CdTe and CdS show strong variations with deposition temperature, and this influences the ultimate grain size. The dielectric functions ɛ of the CdTe 1-xS x alloys have been deduced in order to set up a database for real time investigation of inter-diffusion at the CdS/CdTe and CdTe/CdS interfaces. In CIGS technology, strong variations in ɛ of the Mo back contact during sputter deposition have been observed, and these results have been understood applying a Drude relaxation time that varies with the Mo film thickness. Ex-situ SE measurements of a novel In IIS 3 window layer have shown critical point structures at 2.77+/-0.08 eV, 4.92+/-0.005 eV, and 5.64+/-0.005 eV, as well as an absorption tail with an onset near 1.9 eV. Simulations of solar cell performance comparing In IIS 3 and the conventional CdS have revealed similar quantum efficiencies, suggesting the possibility of a Cd-free window layer in CIGS technology.

  17. Optical Metrology for Directed Self-assembly Patterning Using Mueller Matrix Spectroscopic Ellipsometry Based Scatterometry

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya J.

    The semiconductor industry continues to drive patterning solutions that enable devices with higher memory storage capacity, faster computing performance, lower cost per transistors, and higher transistor density. These developments in the field of semiconductor manufacturing along with the overall minimization of the size of transistors require cutting-edge metrology tools for characterization. Directed self-assembly (DSA) patterning process can be used to fabricate nanoscale line-space patterns and contact holes via thermodynamically driven micro-phase separation of block copolymer (BCP) films with boundary constraints from guiding templates. Its main advantages are high pattern resolution (~10 nm), high throughput, no requirement of a high-resolution mask, and compatibility with standard fab-equipment and processes. Although research into DSA patterning has demonstrated a high potential as a nanoscale patterning process, there are critical challenges that must be overcome before transferring DSA into high volume manufacturing, including achievement of low defect density and high process stability. For this, advances in critical dimension (CD) and overlay measurement as well as rapid defect characterization are required. Both scatterometry and critical dimension-scanning electron microscopy (CD-SEM) are routinely used for inline dimensional metrology. CD-SEM inspection is limited, as it does not easily provide detailed line-shape information, whereas scatterometry has the capability of measuring important feature dimensions including: line-width, line-shape, sidewall-angle, and thickness of the patterned samples quickly and non-destructively. The present work describes the application of Mueller matrix spectroscopic ellipsometry (MMSE) based scatterometry to optically characterize DSA patterned line- space grating and contact hole structures fabricated with phase-separated polystyrene-b-polymethylmethacrylate (PS-b-PMMA) at various integration steps of BCP DSA

  18. Spectroscopic Ellipsometry and Fluorescence Study of Thermochromism in an Ultrathin Poly(diacetylene) Film: Reversibility and Transition Kinetics

    SciTech Connect

    CARPICK,R.W.; MAYER,THOMAS M.; SASAKI,DARRYL Y.; BURNS,ALAN R.

    2000-01-18

    We have investigated the thermochromic transition of an ultrathin poly(diacetylene) film. The Langmuir film is composed of three layers of polymerized 10,12-pentacosadiynoic acid [CH{sub 3}(CH{sub 2}){sub 11}C{triple_bond}CC{triple_bond}C(CH{sub 2}){sub 8}COOH] (poly-PCDA) organized into crystalline domains on a silicon substrate. Spectroscopic ellipsometry and fluorescence intensity measurements are obtained with in-situ temperature control. Poly-PCDA films exhibit a reversible thermal transition between the initial blue form and an intermediate ''purple'' form that exists only at elevated temperature (between 303-333 K), followed by an irreversible transition to the red form after annealing above 320 K. We propose that the purple form is thermally distorted blue poly-PCDA, and may represent a transitional configuration in the irreversible conversion to red. This hypothesis is supported by the appearance of unique features in the absorption spectra for each form as derived from the ellipsometry measurements. Significant fluorescence emission occurs only with the red form, and is reduced at elevated temperatures while the absorption remains unchanged. Reduced emission is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence measurements of the irreversible transition have been performed. Using a first-order kinetic analysis of these measurements we deduce an energy barrier of 17.6 {+-} 1.1 kcal mol{sup -1} between the blue and red forms.

  19. Investigation of temperature dependent dielectric constant of a sputtered TiN thin film by spectroscopic ellipsometry

    SciTech Connect

    Tripura Sundari, S. Ramaseshan, R.; Jose, Feby; Dash, S.; Tyagi, A. K.

    2014-01-21

    The temperature dependence of optical constants of titanium nitride thin film is investigated using Spectroscopic Ellipsometry (SE) between 1.4 and 5 eV in the temperature range of 300 K to 650 K in steps of 50 K. The real and imaginary parts of the dielectric functions ε{sub 1}(E) and ε{sub 2}(E) marginally increase with increase in temperature. A Drude Lorentz dielectric analysis based on free electron and oscillator model are carried out to describe the temperature behavior. With increase in temperature, the unscreened plasma frequency and broadening marginally decreased and increased, respectively. The parameters of the Lorentz oscillator model also showed that the relaxation time decreased with temperature while the oscillator energies increased. This study shows that owing to the marginal change in the refractive index with temperature, titanium nitride can be employed for surface plasmon sensor applications even in environments where rise in temperature is imminent.

  20. Multiple angle of incidence, spectroscopic, plasmon-enhanced, internal reflection ellipsometry for the characterization of solid-liquid interface processes

    NASA Astrophysics Data System (ADS)

    Petrik, P.; Agocs, E.; Kalas, B.; Kozma, P.; Fodor, B.; Nador, J.; Major, C.; Fried, M.

    2015-05-01

    A semi-cylindrical lens in Kretschmann geometry combined with a flow cell was designed for a commercial rotating compensator ellipsometer to perform internal reflection spectroscopic ellipsometry measurements, while allowing the use of multiple angles of incidence. A thin glass slide covered with a gold film was mounted between the half-cylindrical lens and a small-volume flow cell ensuring an improved sensitivity for protein adsorption experiments. The performance of the system was investigated depending on the angle of incidence, wavelength range and thickness of the gold films for surface plasmon resonance enhanced ellipsometric measurements, and a sensitivity increase was revealed compared to ellipsometric measurements with standard flow cells, depending on the measurement parameters and configuration. The sensitivity increase was demonstrated for fibrinogen adsorption.

  1. Study of InGaAs-based modulation doped field effect transistor structures using variable-angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Alterovitz, S. A.; Sieg, R. M.; Yao, H. D.; Snyder, P. G.; Woollam, J. A.; Pamulapati, J.; Bhattacharya, P. K.; Sekula-Moise, P. A.

    1991-01-01

    Variable-angle spectroscopic ellipsometry was used to estimate the thicknesses of all layers within the optical penetration depth of InGaAs-based modulation doped field effect transistor structures. Strained and unstrained InGaAs channels were made by molecular beam epitaxy (MBE) on InP substrates and by metal-organic chemical vapor deposition on GaAs substrates. In most cases, ellipsometrically determined thicknesses were within 10% of the growth-calibration results. The MBE-made InGaAs strained layers showed large strain effects, indicating a probable shift in the critical points of their dielectric function toward the InP lattice-matched concentration.

  2. Temperature dependence of the electronic transitions in BiFeO{sub 3} thin film studied by spectroscopic ellipsometry

    SciTech Connect

    Kang, T. D.; Jeon, B. C.; Moon, S. J.

    2015-04-07

    The temperature dependence of the electronic response of BiFeO{sub 3} thin film grown on a SrTiO{sub 3} substrate is investigated using spectroscopic ellipsometry. By analyzing the pseudodielectric function, we identify two d-d crystal field transitions of Fe{sup 3+} ions in the energy region between 1 and 2 eV. The d-d transitions show abnormal temperature dependence that cannot be attributed to conventional electron-phonon interactions. The origin of the abnormal temperature dependence is discussed in terms of spin-charge coupling. The temperature dependence of the charge transfer transitions located above 2.5 eV is characterized by standard critical point model analysis of the 2nd derivatives of the dielectric function. This analysis provides detailed information of the critical point parameters for charge transfer transitions.

  3. In situ real-time spectroscopic ellipsometry measurement for the investigation of molecular orientation in organic amorphous multilayer structures

    NASA Astrophysics Data System (ADS)

    Yokoyama, Daisuke; Adachi, Chihaya

    2010-06-01

    To investigate molecular orientation in organic amorphous films, in situ real-time spectroscopic ellipsometry measurements were performed during vacuum deposition. Three materials with different molecular shapes were adopted to confirm the generality of the molecular orientation. In all three cases, more than 200 000 values for the ellipsometric parameters measured during deposition were well simulated simultaneously over the entire spectral range and measurement period using a simple model where the films possessed homogeneous optical anisotropy. This demonstrated the homogeneity of the molecular orientation in the direction of film thickness. The molecular orientation can be controlled by the substrate temperature even in multilayer structures. It is also demonstrated that a "multilayer structure" can be fabricated using only one material, where each layer has different optical and electrical properties.

  4. Nucleation and growth of MgO atomic layer deposition: A real-time spectroscopic ellipsometry study

    SciTech Connect

    Wang, Han; Fu, Kan

    2013-11-15

    The atomic layer deposition (ALD) of MgO thin films from bis(cyclopentadienyl) magnesium and H{sub 2}O was studied using in-situ real-time spectroscopic ellipsometry (SE), ex-situ x-ray photoelectron spectroscopy, and grazing-incidence x-ray diffraction. It is found that the initial growth is not linear during the first ten cycles, and magnesium silicate forms spontaneously on the SiO{sub 2}/Si substrates at 250 °C. Submonolayer sensitivity of SE is demonstrated by the analysis of each half-cycle and self-limiting adsorption, revealing characteristic features of hetero- and homo-MgO ALD processes.

  5. Thermal treatment effects imposed on solid DNA cationic lipid complex with hexadecyltrimethylammonium chloride, observed by variable angle spectroscopic ellipsometry

    SciTech Connect

    Nizioł, Jacek

    2014-12-21

    DNA cationic lipid complexes are materials of properties required for applications in organic electronics and optoelectronics. Often, their thermal stability demonstrated by thermogravimetry is cited in the literature as important issue. However, little is known about processes occurring in heated solid DNA cationic lipid complexes. In frame of this work, thin films of Deoxyribonucleic acid-hexadecyltrimethylammonium chloride (DNA-CTMA) were deposited on silicon wafers. Samples were thermally annealed, and simultaneously, their optical functions were measured by spectroscopic ellipsometry. At lower temperatures, thermal expansion coefficient of solid DNA-CTMA was negative, but at higher temperatures positive. Thermally induced modification of absorption spectrum in UV-vis was observed. It occurred at a range of temperatures higher than this of DNA denaturation in solution. The observed phenomenon was irreversible, at least in time scale of the experiment (one day)

  6. In-situ spectroscopic ellipsometry and structural study of HfO{sub 2} thin films deposited by radio frequency magnetron sputtering

    SciTech Connect

    Cantas, Ayten; Aygun, Gulnur; Basa, Deepak Kumar

    2014-08-28

    We have investigated the reduction of unwanted interfacial SiO{sub 2} layer at HfO{sub 2}/Si interface brought about by the deposition of thin Hf metal buffer layer on Si substrate prior to the deposition of HfO{sub 2} thin films for possible direct contact between HfO{sub 2} thin film and Si substrate, necessary for the future generation devices based on high-κ HfO{sub 2} gate dielectrics. Reactive rf magnetron sputtering system along with the attached in-situ spectroscopic ellipsometry (SE) was used to predeposit Hf metal buffer layer as well as to grow HfO{sub 2} thin films and also to undertake the in-situ characterization of the high-κ HfO{sub 2} thin films deposited on n-type 〈100〉 crystalline silicon substrate. The formation of the unwanted interfacial SiO{sub 2} layer and its reduction due to the predeposited Hf metal buffer layer as well as the depth profiling and also structure of HfO{sub 2} thin films were investigated by in-situ SE, Fourier Transform Infrared spectroscopy, and Grazing Incidence X-ray Diffraction. The study demonstrates that the predeposited Hf metal buffer layer has played a crucial role in eliminating the formation of unwanted interfacial layer and that the deposited high-κ HfO{sub 2} thin films are crystalline although they were deposited at room temperature.

  7. In situ spectroscopic ellipsometry growth studies on the Al-doped ZnO films deposited by remote plasma-enhanced metalorganic chemical vapor deposition

    SciTech Connect

    Volintiru, I.; Creatore, M.; Sanden, M. C. M. van de

    2008-02-01

    In situ spectroscopic ellipsometry (SE) was applied to study the pyramidlike and pillarlike growth of Al doped ZnO (AZO) films deposited by means of remote plasma-enhanced metalorganic chemical vapor deposition for transparent conductive oxide applications. Real time SE studies in the visible region allowed discerning between the two growth modes by addressing the time evolution of the bulk and surface roughness layer thickness. While the pillarlike mode is characterized by a constant growth rate, a slower rate in the initial stage (up to 150-200 nm film thickness), compared to the bulk, is observed for the growth of pyramidlike AZO films. The two modes differ also in terms of surface roughness development: a saturation behavior is observed for film thickness above 150-200 nm in the case of the pyramidlike films, while a slow linear increase with film thickness characterizes the pillarlike mode. By extending the SE analysis of the AZO films to the near infrared region, valuable information about the in grain properties could be extracted: excellent in grain mobility values, i.e., larger than 100 and 50 cm{sup 2}/V s, are determined for the pyramidlike and pillarlike AZO layers, respectively. The comparison between the outcome of the in situ real time SE studies and the ex situ electrical and chemical characterization highlights the limitations in the electron transport occurring in both types of films and allows one to address routes toward further improvement in AZO conductivity.

  8. Spectroscopic ellipsometry and fluorescence study of thermochromism in an ultrathin poly(diacetylene) film: Reversibility and transition kinetics

    SciTech Connect

    Carpick, R.W.; Mayer, T.M.; Sasaki, D.Y.; Burns, A.R.

    2000-05-16

    The authors have investigated the thermochromic transition of an ultrathin poly(diacetylene)film. The Langmuir film is composed of three layers of polymerized 10,12-pentacosadiynoic acid [Ch{sub 3}(CH{sub 2}){sub 11}C{triple_bond}CC{triple_bond}C(CH{sub 2}){sub 8}COOH] (poly-PCDA) organized into crystalline domains on a silicon substrate. Spectroscopic ellipsometry and fluorescence intensity measurements are obtained with in situ temperature control. Poly-PCDA films exhibit a reversible thermal transition between the initial blue form and an intermediate purple form that exists only at elevated temperature (between 303 and 333 K), followed by an irreversible transition to the red form after annealing above 320 K. The authors propose that the purple form is thermally distorted blue poly-PCDA and may represent a transitional configuration in the irreversible conversion to red. This hypothesis is supported by the appearance of unique features in the absorption spectra for each form as derived from the ellipsometry measurements. Significant fluorescence emission occurs only with the red form and is reduced at elevated temperatures while the absorption remains unchanged. Reduced emission is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence measurements of the irreversible transition have been performed. Using a first-order kinetic analysis of these measurements, the authors deduce an energy barrier of 17.6 {+-} 1.1 kcal mol{sup {minus}1} between the blue and red forms.

  9. Spectroscopic Ellipsometry Studies of Ag and ZnO Thin Films and Their Interfaces for Thin Film Photovoltaics

    NASA Astrophysics Data System (ADS)

    Sainju, Deepak

    Many modern optical and electronic devices, including photovoltaic devices, consist of multilayered thin film structures. Spectroscopic ellipsometry (SE) is a critically important characterization technique for such multilayers. SE can be applied to measure key parameters related to the structural, optical, and electrical properties of the components of multilayers with high accuracy and precision. One of the key advantages of this non-destructive technique is its capability of monitoring the growth dynamics of thin films in-situ and in real time with monolayer level precision. In this dissertation, the techniques of SE have been applied to study the component layer materials and structures used as back-reflectors and as the transparent contact layers in thin film photovoltaic technologies, including hydrogenated silicon (Si:H), copper indium-gallium diselenide (CIGS), and cadmium telluride (CdTe). The component layer materials, including silver and both intrinsic and doped zinc oxide, are fabricated on crystalline silicon and glass substrates using magnetron sputtering techniques. These thin films are measured in-situ and in real time as well as ex-situ by spectroscopic ellipsometry in order to extract parameters related to the structural properties, such as bulk layer thickness and surface roughness layer thickness and their time evolution, the latter information specific to real time measurements. The index of refraction and extinction coefficient or complex dielectric function of a single unknown layer can also be obtained from the measurement versus photon energy. Applying analytical expressions for these optical properties versus photon energy, parameters that describe electronic transport, such as electrical resistivity and electron scattering time, can be extracted. The SE technique is also performed as the sample is heated in order to derive the effects of annealing on the optical properties and derived electrical transport parameters, as well as the

  10. Investigation of PTFE transfer films by infrared emission spectroscopy and phase-locked ellipsometry

    NASA Technical Reports Server (NTRS)

    Lauer, James L.; Bunting, Bruce G.; Jones, William R., Jr.

    1987-01-01

    When a PTFE sheet was rubbed unidirectionally over a smooth surface of stainless steel an essentially monomolecular transfer film was formed. By ellipsometric and emission infrared spectroscopic techniques it was shown that the film was 10 to 15 A thick and birefringent. From the intensity differences of infrared bands obtained with a polarizer passing radiation polarized in mutually perpendicular planes, it was possible to deduce transfer film orientation with the direction of rubbing. After standing in air for several weeks the transfer films apparently increased in thickness by as much as threefold. At the same time both the index of refraction and the absorption index decreased. Examination of the surfaces by optical and electron microscopies showed that the films had become porous and flaky. These observations were consistent with previous tribological measurements. The coefficients of friction decreased with the formation of the transfer film but increased again as the film developed breaks. The applicability of the ellipsometric and polarized infrared emission techniques to the identification of monomolecular tribological transfer films of polymers such as PTFE has been demonstrated.

  11. Investigation of PTFE transfer films by infrared emission spectroscopy and phase-locked ellipsometry

    NASA Technical Reports Server (NTRS)

    Lauer, James L.; Bunting, Bruce G.; Jones, William R., Jr.

    1988-01-01

    When a PTFE sheet was rubbed unidirectionally over a smooth surface of stainless steel an essentially monomolecular transfer film was formed. by ellipsometric and emission infrared spectroscopic techniques it was shown that the film was 10 to 15 A thick and birefringent. From the intensity differences of infrared bands obtained with a polarizer passing radiation polarized in mutually perpendicular planes, it was possible to deduce transfer film orientation with the direction of rubbing. After standing in air for several weeks the transfer films apparently increased in thickness by as much as threefold. At the same time both the index of refraction and the absorption index decreased. Examination of the surfaces by optical and electron microscopies showed that the films had become porous and flaky. These observations were consistent with previous tribological measurements. The coefficients of friction decreased with the formation of the transfer film but increased again as the film developed breaks. The applicability of the ellipsometric and polarized infrared emission techniques to the identification of monomolecular tribological transfer films of polymers such as PTFE has been demonstrated.

  12. Interplay of electron correlations and localization in disordered β-tantalum films: Evidence from dc transport and spectroscopic ellipsometry study

    SciTech Connect

    Kovaleva, N. N.; Chvostova, D.; Dejneka, A.; Bagdinov, A. V.; Petrova, M. G.; Demikhov, E. I.; Pudonin, F. A.

    2015-02-02

    We report the dc transport (5 K ≲ T ≲ 380 K) and spectroscopic ellipsometry (0.8 eV ≤ hν ≤ 8.5 eV, T ≃ 300 K) study of β-Ta films prepared by rf sputtering deposition as a function of their thickness in the range 2.5 nm ≲ d ≲ 200 nm. The dc transport of the β-Ta films with a thickness d ≳ 25 nm is characterized by negative temperature coefficient of resistivity (TCR) caused by localization effects peculiar of highly disordered metals. Their dielectric function spectra display non-metallic-like behavior due to the presence of the pronounced band at 2 eV. We found that with increasing TCR absolute value, specifying elevated degree disorder, the optical spectral weight (SW) of free charge carriers decreases. The associated SW is recovered in the range of Mott-Hubbard transitions, indicating the mechanism of localization enhancement by electronic correlations in disordered metals.

  13. Interplay of electron correlations and localization in disordered β-tantalum films: Evidence from dc transport and spectroscopic ellipsometry study

    NASA Astrophysics Data System (ADS)

    Kovaleva, N. N.; Chvostova, D.; Bagdinov, A. V.; Petrova, M. G.; Demikhov, E. I.; Pudonin, F. A.; Dejneka, A.

    2015-02-01

    We report the dc transport (5 K ≲ T ≲ 380 K) and spectroscopic ellipsometry (0.8 eV ≤ hν ≤ 8.5 eV, T ≃ 300 K) study of β-Ta films prepared by rf sputtering deposition as a function of their thickness in the range 2.5 nm ≲ d ≲ 200 nm. The dc transport of the β-Ta films with a thickness d ≳ 25 nm is characterized by negative temperature coefficient of resistivity (TCR) caused by localization effects peculiar of highly disordered metals. Their dielectric function spectra display non-metallic-like behavior due to the presence of the pronounced band at 2 eV. We found that with increasing TCR absolute value, specifying elevated degree disorder, the optical spectral weight (SW) of free charge carriers decreases. The associated SW is recovered in the range of Mott-Hubbard transitions, indicating the mechanism of localization enhancement by electronic correlations in disordered metals.

  14. Spectroscopic Ellipsometry, Auger and STM Characterization of Epitaxial Graphene grown on 6H-SiC (0001)

    NASA Astrophysics Data System (ADS)

    Nelson, Florence; Diebold, Alain C.; Sandin, Andreas; Dougherty, Dan; Aspnes, Dave; Rowe, Jack

    2012-02-01

    Graphene grown by the thermal decomposition of SiC has become of interest to the semiconductor industry due to its unique, high-mobility electronic structure. The growth is of a more scalable nature when compared to exfoliated flakes produced from the ``scotch tape'' method. The resulting film rests on a ``buffer layer'' separating the graphene from the underlying substrate, which is thought to consist of a mixture of sp^2 and non-sp^2 bonding due to the sp^3 bonding of the SiC substrate. The mobilities of the graphene layer have previously been shown to differ from that of the interface layer. We investigate the difference in the optical response of the two layers using Spectroscopic Ellipsometry and find a red-shift of the ˜4.5 eV absorbance found in graphene due to the exciton-domianted transition at the M point of the Brilloun Zone. The structural characterization of the films are performed through Auger and STM on substrates which were cleaned by CMP and chemical etching methods prior to the epitaxial growth in UHV.

  15. Spectroscopic ellipsometry studies of GaN films deposited by reactive rf sputtering of GaAs target

    SciTech Connect

    Biswas, A.; Bhattacharyya, D.; Sahoo, N. K.; Yadav, Brajesh S.; Major, S. S.; Srinivasa, R. S.

    2008-04-15

    GaN films have been deposited by reactive rf sputtering of GaAs target in 100% nitrogen ambient on quartz substrates at different substrate temperatures ranging from room temperature to 700 deg. C. A series of films, from arsenic-rich amorphous to nearly arsenic-free polycrystalline hexagonal GaN, has been obtained. The films have been characterized by phase modulated spectroscopic ellipsometry to obtain the optical parameters, viz., fundamental band gap, refractive index, and extinction coefficient, and to understand their dependence on composition and microstructure. A generalized optical dispersion model has been used to carry out the ellipsometric analysis for amorphous and polycrystalline GaN films and the variation of the optical parameters of the films has been studied as a function of substrate temperature. The refractive index values of polycrystalline films with preferred orientation of crystallites are slightly higher (2.2) compared to those for amorphous and randomly oriented films. The dominantly amorphous GaN film shows a band gap of 3.47 eV, which decreases to 3.37 eV for the strongly c-axis oriented polycrystalline film due to the reduction in amorphous phase content with increase in substrate temperature.

  16. Characterization of Si (sub X)Ge (sub 1-x)/Si Heterostructures for Device Applications Using Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    Sieg, R. M.; Alterovitz, S. A.; Croke, E. T.; Harrell, M. J.; Tanner, M.; Wang, K. L.; Mena, R. A.; Young, P. G.

    1993-01-01

    Spectroscopic ellipsometry (SE) characterization of several complex Si (sub X)Ge (sub 1-x)/Si heterostructures prepared for device fabrication, including structures for heterojunction bipolar transistors (HBT), p-type and n-type heterostructure modulation doped field effect transistors, has been performed. We have shown that SE can simultaneously determine all active layer thicknesses, Si (sub X)Ge (sub 1-x) compositions, and the oxide overlayer thickness, with only a general knowledge of the structure topology needed a priori. The characterization of HBT material included the SE analysis of a Si (sub X)Ge (sub 1-x) layer deeply buried (600 nanometers) under the silicon emitter and cap layers. In the SE analysis of n-type heterostructures, we examined for the first time a silicon layer under tensile strain. We found that an excellent fit can be obtained using optical constants of unstrained silicon to represent the strained silicon conduction layer. We also used SE to measure lateral sample homogeneity, providing quantitative identification of the inhomogeneous layer. Surface overlayers resulting from prior sample processing were also detected and measured quantitatively. These results should allow SE to be used extensively as a non-destructive means of characterizing Si (sub X)Ge (sub 1-x)/Si heterostructures prior to device fabrication and testing.

  17. Contact angle hysteresis: study by dynamic cycling contact angle measurements and variable angle spectroscopic ellipsometry on polyimide.

    PubMed

    Hennig, A; Eichhorn, K-J; Staudinger, U; Sahre, K; Rogalli, M; Stamm, M; Neumann, A W; Grundke, K

    2004-08-03

    The phenomenon of contact angle hysteresis was studied on smooth films of polyimide, a polymer type used in the microelectronic industry, by dynamic cycling contact angle measurements based on axisymmetric drop shape analysis-profile in combination with variable angle spectroscopic ellipsometry (VASE). It was found that both advancing and receding contact angles became smaller with increasing the number of cycles and are, therefore, not a property of the dry solid alone. The changes of the wetting behavior during these dynamic cycling contact angle measurements are attributed mainly to swelling and/or liquid retention. To reveal the water-induced changes of the polymer film, the polyimide surface was studied before and after the contact with a water droplet by VASE. Both the experimental ellipsometric spectrum for Delta and that for Psi as well as the corresponding simulations show characteristic shifts due to the contact with water. The so-called effective medium approximation was applied to recover information about the thickness and effective optical constants of the polymer layer from the ellipsometrically measured values of Delta and Psi. On the basis of these results, the swelling and retention behavior of the polyimide films in contact with water droplets were discussed.

  18. A view of the implanted SiC damage by Rutherford backscattering spectroscopy, spectroscopic ellipsometry, and transmission electron microscopy

    SciTech Connect

    Battistig, G.; Khanh, N. Q.; Petrik, P.; Lohner, T.; Dobos, L.; Pecz, B.; Garcia Lopez, J.; Morilla, Y.

    2006-11-01

    4H-SiC single crystalline substrates were implanted at room temperature with 150 keV Al{sup +} ions using fluences of 4x10{sup 14}, 1x10{sup 15}, and 2x10{sup 15} cm{sup -2} with current density of 2.5 {mu}A cm{sup -2}. The samples were subsequently annealed at 1100 deg. C in N{sub 2} for 1 h in order to analyze their structural recovery. The disorder induced in both sublattices by the Al{sup +} ions was studied by backscattering spectrometry in channeling geometry with a 3.5 MeV He{sup 2+} beam. The results were compared with the optical properties of the samples measured by spectroscopic ellipsometry. In a previous work, we concluded that during the postimplantation annealing of a highly damaged SiC crystalline material the short distance order can be recovered, while the long distance disorder remains. We also presented the possibility to have grains of different polytypes oriented faraway from the original direction. Now, this alternative is confirmed by the cross-sectional transmission and high resolution electron microscopy studies, carried out to obtain information about the crystal structure.

  19. Quantifying protein adsorption on combinatorially sputtered Al-, Nb-, Ta- and Ti-containing films with electron microprobe and spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Byrne, T. M.; Lohstreter, L.; Filiaggi, M. J.; Bai, Zhijun; Dahn, J. R.

    2009-04-01

    Although metallic biomaterials are widely used, systematic studies of protein adsorption onto such materials are generally lacking. Combinatorial binary libraries of Al 1-xNb x, Al 1-xTa x, Al 1-xTi x, Nb 1-xTa x, Nb 1-xTi x, and Ta 1-xTi x (0 ⩽ x ⩽ 1) and a ternary library of Al 1-xTi xTa y (0 ⩽ x ⩽ 1 and 0 ⩽ y ⩽ 0.7), along with their corresponding pure element films were sputtered onto glass substrates using a unique magnetron sputtering technique. Films were characterized with wavelength-dispersive spectroscopy (WDS), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). Fibrinogen and albumin adsorption amounts were measured by wavelength-dispersive spectroscopy (WDS) and spectroscopic ellipsometry (SE) equipment, both high throughput techniques with automated motion stage capabilities. Protein adsorption onto these films was found to be closely correlated to the alumina surface fraction, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen and albumin. Protein adsorption amounts obtained with WDS and SE were in good agreement for all films.

  20. Determination of the optical properties and size dispersion of Si nanoparticles within a dielectric matrix by spectroscopic ellipsometry

    SciTech Connect

    Keita, A.-S.; Naciri, A. En Battie, Y.; Delachat, F.; Carrada, M.; Ferblantier, G.; Slaoui, A.

    2014-09-14

    We report on a comparative study between dielectric functions of Si nanoparticles (Si-NPs) obtained from Bruggeman effective medium approximation (BEMA), Maxwell-Garnett (MG), and a modified Maxwell-Garnett (MMG) models. Unlike BEMA and MG, a size-distribution dependent dielectric function of Si-NPs is considered in the introduced MMG model. We show that the standard deviation σ of a size distribution can be evaluated by analyzing the imaginary part of the dielectric functions of Si-NPs extracted from BEMA and MMG. In order to demonstrate this, several samples composed of Si-NPs embedded in silicon-rich silicon nitride are investigated by spectroscopic ellipsometry over the photon energy range varying between 2 and 4 eV. Assuming a lognormal size distribution of the Si nanoparticles, it is evidenced that the parameter σ ranges between 1.15 and 1.35. The values of size dispersion deduced by this methodology are in good agreement with TEM observations.

  1. Spectroscopic ellipsometry study of Pb1-xEuxSe(0⩽x⩽0.45)

    NASA Astrophysics Data System (ADS)

    Kanazawa, Hideyuki; Adachi, Sadao; Yamaguchi, Tsutomu; Murashige, Shinichi; Murakami, Kensuke

    1999-09-01

    We have measured the complex dielectric function, ɛ(E)=ɛ1(E)+iɛ2(E), of Pb1-xEuxSe in the 1.2-5.0 eV photon-energy range by spectroscopic ellipsometry at room temperature. The Pb1-xEuxSe crystals were grown by the conventional Bridgman method (x=0) and by hot-wall epitaxy on (111) BaF2 substrates at 300 °C (0.09⩽x⩽0.45). The measured ɛ(E) data revealed distinct structures at two critical-point (CP) energies, E1 and E2. The second-derivative spectra of the complex dielectric function, d2ɛ(E)/dE2, were analyzed using a theoretical model called the model dielectric function. The CP parameters, such as the CP energy, amplitude, and broadening, as a function of alloy composition x were fit determined from these derivative analyses. This parameterization of the CP parameters enabled us to calculate ɛ(E) and its related optical constants for optional alloy composition and photon energy.

  2. Thermal dependence of optical properties of silver thin films studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Sundari, S. Tripura; Dash, S.; Tyagi, A. K.

    2012-06-01

    The thermal dependence of the dielectric constants of silver thin films were investigated between 300 K and 650 K by spectroscopic ellipsometer in the energy range 1.5 to 5 eV. The studies showed an increase in the imaginary part (ɛ2) of the dielectric function, a shift of ˜300 meV in the onset of the main absorption (L3-L2'(EF)), appearance of additional absorption above 500 K which is attributed to (L2'- L1) and increased broadening of the absorption spectra owing to smearing of Fermi level. It was found that the unscreened plasma frequency ωpu associated with resonant oscillations of conduction electrons increased while the relaxation time decreased with increase in temperature.

  3. Surface Effects of the HgI(2) Crystal Characterized by Spectroscopic Ellipsometry.

    PubMed

    En Naciri, A; Johann, L; Kleim, R; Sieskind, M; Amann, M

    2001-09-01

    We report on determination of the surface effects of mercuric iodide (HgI(2)) uniaxial HgI(2) optical parameters with a fixed-polarizer, rotating-polarizer, and fixed-analyzer spectroscopic ellipsometer (PRPSE) after chemical polishing. The characteristics of the chemical complex [KHgI(3), H(2)O] that forms on the HgI(2) surface during KI etching have been investigated over the spectral range from 400 to 800 nm. Surface roughness and effects of the ellipsometric parameters of HgI(2) were treated, and the thickness of the layer formed on the surface was determined and analyzed by PRPSE. The surface roughness was modeled with the Bruggeman effective medium approximation.

  4. Determination of Mean Thickness of an Oxide Layer on a Silicon Sphere by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Zhang, Ji-Tao; Li, Yan; Luo, Zhi-Yong; Wu, Xue-Jian

    2010-05-01

    One of the biggest obstacles to reduce the uncertainty of the Avogadro constant NA is such that there will be an oxide layers on the surface of a silicon sphere. The thickness of this layer is measured by a modified spectroscopic ellipsometer, which can eliminate the influence of the curved surface, and the results are calibrated by x-ray reflectivity. Fifty positions distributed nearly uniformly on the surface of the silicon sphere are measured twice. The results show that the mean thickness of the overall oxide layer is 3.75 nm with the standard uncertainty of 0.21 nm, which means that the relative uncertainty component of NA owing to this layer can be reduced to 1.2 × 10-8.

  5. Structural studies on Si:H network before and after solid phase crystallization using spectroscopic ellipsometry: Correlation with Raman spectroscopy and transmission electron microscopy

    NASA Astrophysics Data System (ADS)

    Goswami, Romyani; Ray, Swati

    2013-10-01

    The structure of hydrogenated silicon films (Si:H) before and after solid phase crystallization (SPC) has been investigated by detailed study of spectroscopic ellipsometry (SE). The Si:H films have been deposited by radio frequency plasma enhanced chemical vapor deposition (RF PECVD) system varying deposition power density from 0.03 W/cm2 to 0.46 W/cm2, just below the onset of amorphous to nano-crystalline transition region. Solid phase crystallization of the Si:H network has been done by thermal annealing of the films in a vacuum furnace. Different bulk compositions of the as deposited Si:H network and annealed (polycrystalline) films have been calculated from the fitted parameters obtained from the simulation of the ellipsometry data by Bruggeman effective medium approximation (BEMA) method. More compact and void free structure in the bulk layer of the as deposited films has been observed at low power deposition region. Whereas void fraction in the bulk and surface roughness layer has increased with increase of deposition power density. For the annealed films higher crystallinity at the bulk layer with fewer voids has been observed at the low power region but in the surface roughness layer void fraction dominates in all the low and high power deposited films. The results obtained from the spectroscopic ellipsometry study have been correlated with Raman spectroscopy and transmission electron microscopy for both the as deposited and annealed films.

  6. Use of Variable Angle Spectroscopic Ellipsometry in Order to Determine Contaminant Optical Properties

    NASA Technical Reports Server (NTRS)

    Hughes, C.; Workman, G.; Reynolds, J.

    1997-01-01

    In order to measure contaminant levels found in the manufacture of the Redesigned Solid Rocket Motor (RSRM), optical properties of the contaminants are needed to develop standards for calibration purposes. Specific to our efforts is the determination of the complex index of refraction for a hydrocarbon mixture and a commercial methyl siloxane. Using ellipsometric measurements with multiple angles of incident and a range of wavelengths in the near infrared a determination of the index of refraction and the extinction coefficient were made for the contaminants. This paper will present the optical techniques and modeling approach used to determine these optical constants of the hydrocarbon mixture and the methyl siloxane studied.

  7. Exploration of optical behavior of Cd1-xNixTe thin films by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Mahmood, Arshad; Aziz, U.; Rashid, R.; Shah, A.; Ali, Zahid; Raza, Qaiser; Raffi, M.; Shakir, Imran

    2014-12-01

    We report on the tunability over the optical behavior of e-beam evaporated nanocrystalline thin films of Cd1-xNixTe (0 ≤ x ≤ 0.15). X-ray diffraction analysis reveals the polycrystalline nature of the film having zinc blend structure with a preferred growth direction along (111) plane parallel to the substrate. X-ray diffraction results also indicate that the grain size of the films decreases from 27.13 nm to 16.23 nm with an increase in Ni concentration from 0 to 15 at%. The compositional analysis of the film was carried out by energy dispersive x-ray analysis (EDX) which confirms the successful inclusion of Ni in CdTe matrix. Spectroscopic ellipsometery (SE) results demonstrate that the band gap of the grown films increases from 1.48 eV to 1.86 eV while refractive index (n) and extinction coefficient (k) decrease with the increasing Ni concentration. The increase in band gap energy of Cd1-xNixTe films as a function of Ni concentration was confirmed by spectrophotometric analysis.

  8. Influence of annealing temperature and Sn doping on the optical properties of hematite thin films determined by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    de Souza, Lígia P.; Chaves, Rodrigo O. G.; Malachias, Angelo; Paniago, Roberto; Ferreira, Sukarno O.; Ferlauto, Andre S.

    2016-06-01

    Hematite (α-Fe2O3) thin films were prepared by sol-gel route and investigated for application in H2 generation by photo-assisted water splitting. The photoelectrochemical (PEC) performance was shown to increase significantly for films deposited on SnO2:F/glass subjected to high temperature (T) annealing (>750 °C). Strong correlation was found between photogenerated current, donor concentration, and Sn concentration as determined by Mott-Schottky analysis and X-ray photoelectron spectroscopy. The effects of thermal annealing and Sn addition in the resulting microstructure and optical properties of hematite films deposited on fused silica substrates were determined by a combination of structural characterization techniques and spectroscopic ellipsometry. Thermal annealing (>600 °C) induces a higher optical absorption that is associated directly to film densification and grain growth; however, it promotes no changes in the energy positions of the main Fe2O3 electronic transitions. The band gap energy was found to be 2.21 eV and independent of microstructure and of Sn concentration for all studied films. On the other hand, Sn can be incorporated in the Fe2O3 lattice for concentration up to Sn/Fe ˜2%, leading to an increase in energy split of the main absorption peak, attributed to a distortion of the Fe2O3 lattice. For higher concentrations, Sn incorporation leads to a reduction in absorption, associated with higher porosity and the formation of a secondary Sn-rich phase. In summary, the variation in the optical properties induced by thermal annealing and Sn addition cannot account for the order of magnitude increase of the current density generated by photoanodes annealed at high T (>750 °C); thus, it is concluded that the major contribution for the enhanced PEC performance comes from improved electronic properties induced by the n-type doping caused by Sn diffusion from the SnO2:F substrate.

  9. Infrared Spectroscopic Imaging for Prostate Pathology Practice

    DTIC Science & Technology

    2011-04-01

    Paschalis EP, Boskey AL (1999) J Biomed Opt 4: 14 –21 13. Kidder LH, Kalasinsky VF , Luke JL, Levin IW, Lewis EN (1997) Nat Medicine 3:235–237 14 . Ellis DI...SUPPLEMENTARY NOTES 14 . ABSTRACT The report summarizes progress towards using Fourier transform infrared spectroscopic imaging for...3 6 9 12 1 4 7 10 2 5 8 11 15 18 13 16 14 17 96 3 104 5 6 1171 8 12 15 181316 14 17 19 20 22 262321 24 25 2927 30 343128 32 33 35 36 37 38 e. Develop

  10. Dielectric functions and carrier concentrations of Hg{sub 1−x}Cd{sub x}Se films determined by spectroscopic ellipsometry

    SciTech Connect

    Lee, A. J.; Peiris, F. C.; Brill, G.; Doyle, K.; Myers, T. H.

    2015-08-17

    Spectroscopic ellipsometry, ranging from 35 meV to 6 eV, was used to determine the dielectric functions of a series of molecular beam epitaxy-grown Hg{sub 1−x}Cd{sub x}Se thin films deposited on both ZnTe/Si(112) and GaSb(112) substrates. The fundamental band gap as well as two higher-order electronic transitions blue-shift with increasing Cd composition in Hg{sub 1−x}Cd{sub x}Se, as expected. Representing the free carrier absorption with a Drude oscillator, we found that the effective masses of Hg{sub 1−x}Cd{sub x}Se (grown on ZnTe/Si) vary between 0.028 and 0.050 times the free electron mass, calculated using the values of carrier concentration and the mobility obtained through Hall measurements. Using these effective masses, we determined the carrier concentrations of Hg{sub 1−x}Cd{sub x}Se samples grown on GaSb, which is of significance as films grown on such doped-substrates posit ambiguous results when measured by conventional Hall experiments. These models can serve as a basis for monitoring Cd-composition during sample growth through in-situ spectroscopic ellipsometry.

  11. Investigation of Bovine Serum Albumin (BSA) Attachment onto Self-Assembled Monolayers (SAMs) Using Combinatorial Quartz Crystal Microbalance with Dissipation (QCM-D) and Spectroscopic Ellipsometry (SE).

    PubMed

    Phan, Hanh T M; Bartelt-Hunt, Shannon; Rodenhausen, Keith B; Schubert, Mathias; Bartz, Jason C

    2015-01-01

    Understanding protein adsorption kinetics to surfaces is of importance for various environmental and biomedical applications. Adsorption of bovine serum albumin to various self-assembled monolayer surfaces including neutral and charged hydrophilic and hydrophobic surfaces was investigated using in-situ combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry. Adsorption of bovine serum albumin varied as a function of surface properties, bovine serum albumin concentration and pH value. Charged surfaces exhibited a greater quantity of bovine serum albumin adsorption, a larger bovine serum albumin layer thickness, and increased density of bovine serum albumin protein compared to neutral surfaces at neutral pH value. The quantity of adsorbed bovine serum albumin protein increased with increasing bovine serum albumin concentration. After equilibrium sorption was reached at pH 7.0, desorption of bovine serum albumin occurred when pH was lowered to 2.0, which is below the isoelectric point of bovine serum albumin. Our data provide further evidence that combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry is a sensitive analytical tool to evaluate attachment and detachment of adsorbed proteins in systems with environmental implications.

  12. Investigation of Bovine Serum Albumin (BSA) Attachment onto Self-Assembled Monolayers (SAMs) Using Combinatorial Quartz Crystal Microbalance with Dissipation (QCM-D) and Spectroscopic Ellipsometry (SE)

    PubMed Central

    Phan, Hanh T. M.; Bartelt-Hunt, Shannon; Rodenhausen, Keith B.; Schubert, Mathias; Bartz, Jason C.

    2015-01-01

    Understanding protein adsorption kinetics to surfaces is of importance for various environmental and biomedical applications. Adsorption of bovine serum albumin to various self-assembled monolayer surfaces including neutral and charged hydrophilic and hydrophobic surfaces was investigated using in-situ combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry. Adsorption of bovine serum albumin varied as a function of surface properties, bovine serum albumin concentration and pH value. Charged surfaces exhibited a greater quantity of bovine serum albumin adsorption, a larger bovine serum albumin layer thickness, and increased density of bovine serum albumin protein compared to neutral surfaces at neutral pH value. The quantity of adsorbed bovine serum albumin protein increased with increasing bovine serum albumin concentration. After equilibrium sorption was reached at pH 7.0, desorption of bovine serum albumin occurred when pH was lowered to 2.0, which is below the isoelectric point of bovine serum albumin. Our data provide further evidence that combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry is a sensitive analytical tool to evaluate attachment and detachment of adsorbed proteins in systems with environmental implications. PMID:26505481

  13. Infrared Spectroscopic Imaging: The Next Generation

    PubMed Central

    Bhargava, Rohit

    2013-01-01

    Infrared (IR) spectroscopic imaging seemingly matured as a technology in the mid-2000s, with commercially successful instrumentation and reports in numerous applications. Recent developments, however, have transformed our understanding of the recorded data, provided capability for new instrumentation, and greatly enhanced the ability to extract more useful information in less time. These developments are summarized here in three broad areas— data recording, interpretation of recorded data, and information extraction—and their critical review is employed to project emerging trends. Overall, the convergence of selected components from hardware, theory, algorithms, and applications is one trend. Instead of similar, general-purpose instrumentation, another trend is likely to be diverse and application-targeted designs of instrumentation driven by emerging component technologies. The recent renaissance in both fundamental science and instrumentation will likely spur investigations at the confluence of conventional spectroscopic analyses and optical physics for improved data interpretation. While chemometrics has dominated data processing, a trend will likely lie in the development of signal processing algorithms to optimally extract spectral and spatial information prior to conventional chemometric analyses. Finally, the sum of these recent advances is likely to provide unprecedented capability in measurement and scientific insight, which will present new opportunities for the applied spectroscopist. PMID:23031693

  14. High-Definition Infrared Spectroscopic Imaging

    PubMed Central

    Reddy, Rohith K.; Walsh, Michael J.; Schulmerich, Matthew V.; Carney, P. Scott; Bhargava, Rohit

    2013-01-01

    The quality of images from an infrared (IR) microscope has traditionally been limited by considerations of throughput and signal-to-noise ratio (SNR). An understanding of the achievable quality as a function of instrument parameters, from first principals is needed for improved instrument design. Here, we first present a model for light propagation through an IR spectroscopic imaging system based on scalar wave theory. The model analytically describes the propagation of light along the entire beam path from the source to the detector. The effect of various optical elements and the sample in the microscope is understood in terms of the accessible spatial frequencies by using a Fourier optics approach and simulations are conducted to gain insights into spectroscopic image formation. The optimal pixel size at the sample plane is calculated and shown much smaller than that in current mid-IR microscopy systems. A commercial imaging system is modified, and experimental data are presented to demonstrate the validity of the developed model. Building on this validated theoretical foundation, an optimal sampling configuration is set up. Acquired data were of high spatial quality but, as expected, of poorer SNR. Signal processing approaches were implemented to improve the spectral SNR. The resulting data demonstrated the ability to perform high-definition IR imaging in the laboratory by using minimally-modified commercial instruments. PMID:23317676

  15. Measurement of InAsSb bandgap energy and InAs/InAsSb band edge positions using spectroscopic ellipsometry and photoluminescence spectroscopy

    SciTech Connect

    Webster, P. T.; Riordan, N. A.; Liu, S.; Zhang, Y.-H.; Johnson, S. R.; Steenbergen, E. H.

    2015-12-28

    The structural and optical properties of lattice-matched InAs{sub 0.911}Sb{sub 0.089} bulk layers and strain-balanced InAs/InAs{sub 1−x}Sb{sub x} (x ∼ 0.1–0.4) superlattices grown on (100)-oriented GaSb substrates by molecular beam epitaxy are examined using X-ray diffraction, spectroscopic ellipsometry, and temperature dependent photoluminescence spectroscopy. The photoluminescence and ellipsometry measurements determine the ground state bandgap energy and the X-ray diffraction measurements determine the layer thickness and mole fraction of the structures studied. Detailed modeling of the X-ray diffraction data is employed to quantify unintentional incorporation of approximately 1% Sb into the InAs layers of the superlattices. A Kronig-Penney model of the superlattice miniband structure is used to analyze the valence band offset between InAs and InAsSb, and hence the InAsSb band edge positions at each mole fraction. The resulting composition dependence of the bandgap energy and band edge positions of InAsSb are described using the bandgap bowing model; the respective low and room temperature bowing parameters for bulk InAsSb are 938 and 750 meV for the bandgap, 558 and 383 meV for the conduction band, and −380 and −367 meV for the valence band.

  16. Water content of hydrated polymer brushes measured by an in situ combination of a quartz crystal microbalance with dissipation monitoring and spectroscopic ellipsometry.

    PubMed

    Ramos, Jagoba J Iturri; Moya, Sergio E

    2011-12-15

    Poly(methacryloyloxy ethyltrimethylammonium chloride) (PMETAC), poly(sulfopropylmethacrylate potassium salt), or poly(N-isopropyl acrylamide) (PNIPAM) brushes are synthesized by means of the atom transfer radical polymerization technique from gold surfaces coated with a monolayer of the initiator ω-mercaptoundecyl bromo isobutyrate. The brush growth is followed in situ and in real time by the combination of quartz crystal microbalance with dissipation technique (QCM-D) and spectroscopic ellipsometry in a single device. The combination of QCM-D and ellipsometry allows for the simultaneous determination of both the acoustic mass, macous, comprising the mass of the polymer and the solvent, and the optical mass, mopt, which corresponds to the polymer mass alone. Brush hydration is calculated from the difference between the values obtained for macous and mopt for each polymer synthesized. Brush hydration is then used to quantify the percentage of water released in the brush during collapse; a 30-40% release of water for PMETAC and PSPM brushes in 1 M NaCl and 80% for PNIPAM brushes when the temperature is increased to values above the lower critical solution temperature is observed.

  17. Infrared laser spectroscopic trace gas sensing

    NASA Astrophysics Data System (ADS)

    Sigrist, Markus

    2016-04-01

    Chemical sensing and analyses of gas samples by laser spectroscopic methods are attractive owing to several advantages such as high sensitivity and specificity, large dynamic range, multi-component capability, and lack of pretreatment or preconcentration procedures. The preferred wavelength range comprises the fundamental molecular absorption range in the mid-infared between 3 and 15 μm, whereas the near-infrared range covers the (10-100 times weaker) higher harmonics and combination bands. The availability of near-infrared and, particularly, of broadly tunable mid-infrared sources like external cavity quantum cascade lasers (EC-QCLs), interband cascade lasers (ICLs), difference frequency generation (DFG), optical parametric oscillators (OPOs), recent developments of diode-pumped lead salt semiconductor lasers, of supercontinuum sources or of frequency combs have eased the implementation of laser-based sensing devices. Sensitive techniques for molecular absorption measurements include multipass absorption, various configurations of cavity-enhanced techniques such as cavity ringdown (CRD), or of photoacoustic spectroscopy (PAS) including quartz-enhanced (QEPAS) or cantilever-enhanced (CEPAS) techniques. The application requirements finally determine the optimum selection of laser source and detection scheme. In this tutorial talk I shall discuss the basic principles, present various experimental setups and illustrate the performance of selected systems for chemical sensing of selected key atmospheric species. Applications include an early example of continuous vehicle emission measurements with a mobile CO2-laser PAS system [1]. The fast analysis of C1-C4 alkanes at sub-ppm concentrations in gas mixtures is of great interest for the petrochemical industry and was recently achieved with a new type of mid-infrared diode-pumped piezoelectrically tuned lead salt vertical external cavity surface emitting laser (VECSEL) [2]. Another example concerns measurements on short

  18. Evaluation of thickness and strain of thin planar layers of InAs on GaAs(001) using spectroscopic ellipsometry

    SciTech Connect

    Eyink, K. G.; Szmulowicz, F.; Esposito, D.; Grazulis, L.; Hill, M.; Mahalingam, K.; Aronow, A. J.

    2014-07-21

    We develop a technique for accurately measuring thickness of planar InAs films grown on (001) GaAs by spectroscopic ellipsometry, using bulk optical constants. We observe that the critical point structure for the E{sub 1} and E{sub 1} + Δ{sub 1} transitions extracted from the measured dielectric properties varies with strain in the layer. Transmission electron microscopy confirms the extracted thickness and measures the residual strain based on the dislocation spacing in the film. At small thickness, the E{sub 1} critical point is seen to markedly deviate from the dependence predicted by deformation potential theory and appears to be consistent with additional quantum confinement effects.

  19. A new simple tubular flow cell for use with variable angle spectroscopic ellipsometry: A high throughput in situ protein adsorption study

    NASA Astrophysics Data System (ADS)

    Byrne, T. M.; Trussler, S.; McArthur, M. A.; Lohstreter, L. B.; Bai, Zhijun; Filiaggi, M. J.; Dahn, J. R.

    2009-09-01

    A simple and novel flow cell design is presented here for use with variable angle spectroscopic ellipsometry (VASE) to study the adsorption of liquid-borne species on reflective surfaces. The flow cell allows a sample as large as 6 mm × 75 mm to be probed point by point and at any common ellipsometric angle of incidence, unlike other designs. Using our flow cell system with VASE, combinatorial films of Al 1-xNb x, Al 1-xTa x, and Al 1-xTi x (0 ⩽ x ⩽ 1) were tested in situ for fibrinogen affinity along their 75 mm long compositional gradients. Fibrinogen adsorption on the films was found to be closely correlated to the various surface oxide fractions, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen for each binary library. Adsorbed amounts measured in situ were in agreement with previously obtained values found using ex situ techniques.

  20. Spectroscopic ellipsometry on Si/SiO{sub 2}/graphene tri-layer system exposed to downstream hydrogen plasma: Effects of hydrogenation and chemical sputtering

    SciTech Connect

    Eren, Baran; Fu, Wangyang; Marot, Laurent Calame, Michel; Steiner, Roland; Meyer, Ernst

    2015-01-05

    In this work, the optical response of graphene to hydrogen plasma treatment is investigated with spectroscopic ellipsometry measurements. Although the electronic transport properties and Raman spectrum of graphene change after plasma hydrogenation, ellipsometric parameters of the Si/SiO2/graphene tri-layer system do not change. This is attributed to plasma hydrogenated graphene still being electrically conductive, since the light absorption of conducting 2D materials does not depend on the electronic band structure. A change in the light transmission can only be observed when higher energy hydrogen ions (30 eV) are employed, which chemically sputter the graphene layer. An optical contrast is still apparent after sputtering due to the remaining traces of graphene and hydrocarbons on the surface. In brief, plasma treatment does not change the light transmission of graphene; and when it does, this is actually due to plasma damage rather than plasma hydrogenation.

  1. New infrared spectroscopic database for bromine nitrate

    NASA Astrophysics Data System (ADS)

    Wagner, Georg; Birk, Manfred

    2016-08-01

    Fourier transform infrared measurements of bromine nitrate have been performed in the spectral region 675-1400 cm-1 at 0.014 cm-1 spectral resolution. Absorption cross sections were derived from 38 spectra covering the temperature range from 203 to 296 K and air pressure range from 0 to 190 mbar. For line-by-line analysis, further spectra were recorded at 0.00094 cm-1 spectral resolution at 223 and 293 K. The sample was synthesized from ClONO2 and Br2. Band strengths of the bands ν3 around 803 cm-1 and ν2 around 1286 cm-1 were determined from three pure BrONO2 measurements at different temperatures and pressures. Number densities in the absorption cell were derived from pressure measurements of the purified sample taking into account small amounts of impurities determined spectroscopically. Resulting band strengths are Sν3 = 2.872(52) × 10-17 cm2 molec-1 cm-1 and Sν2 = 3.63(15) × 10-17 cm2 molec-1 cm-1. Absorption cross sections of all measurements were scaled to these band strengths. Further data reduction was achieved with an interpolation scheme based on two-dimensional polynomials in ln(pressure) and temperature. The database is well-suited for remote-sensing application and should reduce the atmospheric bromine nitrate error budget substantially.

  2. Infrared Spectroscopic Imaging of Latent Fingerprints and Associated Forensic Evidence

    PubMed Central

    Chen, Tsoching; Schultz, Zachary D.; Levin, Ira W.

    2011-01-01

    Fingerprints reflecting a specific chemical history, such as exposure to explosives, are clearly distinguished from overlapping, and interfering latent fingerprints using infrared spectroscopic imaging techniques and multivariate analysis. PMID:19684917

  3. Spectroscopic Ellipsometry Studies of Thin Film a-Si:H Solar Cell Fabrication by Multichamber Deposition in the n-i-p Substrate Configuration

    NASA Astrophysics Data System (ADS)

    Dahal, Lila Raj

    Real time spectroscopic ellipsometry (RTSE), and ex-situ mapping spectroscopic ellipsometry (SE) are powerful characterization techniques capable of performance optimization and scale-up evaluation of thin film solar cells used in various photovoltaics technologies. These non-invasive optical probes employ multichannel spectral detection for high speed and provide high precision parameters that describe (i) thin film structure, such as layer thicknesses, and (ii) thin film optical properties, such as oscillator variables in analytical expressions for the complex dielectric function. These parameters are critical for evaluating the electronic performance of materials in thin film solar cells and also can be used as inputs for simulating their multilayer optical performance. In this Thesis, the component layers of thin film hydrogenated silicon (Si:H) solar cells in the n-i-p or substrate configuration on rigid and flexible substrate materials have been studied by RTSE and ex-situ mapping SE. Depositions were performed by magnetron sputtering for the metal and transparent conducting oxide contacts and by plasma enhanced chemical vapor deposition (PECVD) for the semiconductor doped contacts and intrinsic absorber layers. The motivations are first to optimize the thin film Si:H solar cell in n-i-p substrate configuration for single-junction small-area dot cells and ultimately to scale-up the optimized process to larger areas with minimum loss in device performance. Deposition phase diagrams for both i- and p -layers on 2" x 2" rigid borosilicate glass substrate were developed as functions of the hydrogen-to-silane flow ratio in PECVD. These phase diagrams were correlated with the performance parameters of the corresponding solar cells, fabricated in the Cr/Ag/ZnO/n/i/ p/ITO structure. In both cases, optimization was achieved when the layers were deposited in the protocrystalline phase. Identical solar cell structures were fabricated on 6" x 6" borosilicate glass with

  4. Infrared spectroscopy and spectroscopic imaging in forensic science.

    PubMed

    Ewing, Andrew V; Kazarian, Sergei G

    2017-01-16

    Infrared spectroscopy and spectroscopic imaging, are robust, label free and inherently non-destructive methods with a high chemical specificity and sensitivity that are frequently employed in forensic science research and practices. This review aims to discuss the applications and recent developments of these methodologies in this field. Furthermore, the use of recently emerged Fourier transform infrared (FT-IR) spectroscopic imaging in transmission, external reflection and Attenuated Total Reflection (ATR) modes are summarised with relevance and potential for forensic science applications. This spectroscopic imaging approach provides the opportunity to obtain the chemical composition of fingermarks and information about possible contaminants deposited at a crime scene. Research that demonstrates the great potential of these techniques for analysis of fingerprint residues, explosive materials and counterfeit drugs will be reviewed. The implications of this research for the examination of different materials are considered, along with an outlook of possible future research avenues for the application of vibrational spectroscopic methods to the analysis of forensic samples.

  5. Detection of β-amyloid peptide (1-16) and amyloid precursor protein (APP770) using spectroscopic ellipsometry and QCM techniques: a step forward towards Alzheimers disease diagnostics.

    PubMed

    Mustafa, M K; Nabok, A; Parkinson, D; Tothill, I E; Salam, F; Tsargorodskaya, A

    2010-12-15

    A highly sensitive method of spectroscopic ellipsometry in total internal reflection mode (TIRE) was exploited for detecting β-amyloid peptide (Aβ(1-16)) in the direct immune reaction with monoclonal DE2 antibodies (raised against Aβ(1-16)) electrostatically immobilised on the surface of gold. A rapid detection of Aβ(1-16) in a wide range of concentrations from 5 μg/ml down to 0.05 ng/ml was achieved using a cost-effective and label-free direct immunoassay format. TIRE dynamic spectral measurements proved that the immune reaction between DE2 monoclonal antibodies and Aβ(1-16) is highly specific with the affinity constant K(D)=1.46×10(-8) mol/l. The same DE2 antibodies were utilised for detection of amyloid precursor protein APP(770), a larger protein containing Aβ(1-16) domain, using the quartz crystal microbalance (QCM) measurements in liquid. A combination of QCM and TIRE kinetics results allowed the evaluation of the originally unknown concentration of APP(770) in complete medium solution containing other proteins, salts, and amino acids.

  6. Effects of oxygen partial pressure, deposition temperature, and annealing on the optical response of CdS:O thin films as studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Junda, Maxwell M.; Grice, Corey R.; Subedi, Indra; Yan, Yanfa; Podraza, Nikolas J.

    2016-07-01

    Ex-situ spectroscopic ellipsometry measurements are made on radio frequency magnetron sputtered oxygenated cadmium sulfide (CdS:O) thin films. Films are deposited onto glass substrates at room temperature and at 270 °C with varying oxygen to total gas flow ratios in the sputtering ambient. Ellipsometric spectra from 0.74 to 5.89 eV are collected before and after annealing at 607 °C to simulate the thermal processes during close-space sublimation of overlying cadmium telluride in that solar cell configuration. Complex dielectric function (ɛ = ɛ1 + iɛ2) spectra are extracted for films as a function of oxygen gas flow ratio, deposition temperature, and post-deposition annealing using a parametric model accounting for critical point transitions and an Urbach tail for sub-band gap absorption. The results suggest an inverse relationship between degree of crystallinity and oxygen gas flow ratio, whereas annealing is shown to increase crystallinity in all samples. Direct band gap energies are determined from the parametric modeling of ɛ and linear extrapolations of the square of the absorption coefficient. As-deposited samples feature a range of band gap energies whereas annealing is shown to result in gap energies ranging only from 2.40 to 2.45 eV, which is close to typical band gaps for pure cadmium sulfide.

  7. Plasmon-exciton interaction and screening of exciton in ZnO-based thin film on bulk Pt as analyzed by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Darma, Yudi; Dimas Satrya, Christoforus; Marlina, Resti; Kurniawan, Robi; Herng, Tun Seng; Ding, Jun; Rusydi, Andrivo

    2017-01-01

    We study plasmon-exciton interaction in ZnO-based thin film on bulk Pt by using high resolution spectroscopic ellipsometry. ZnO films on quartz are used as reference. This study shows the strong electronic interactions between ZnO film and Pt by considering the significant suppression of exciton in ZnO film, in comparison to ZnO film on quartz. We found that plasmon in Pt are responsible to provide transferred electron for electronic blocking of exciton in ZnO film induce by spontaneous recombination from Pt. In the case of Cu doped ZnO film, we confirm screening effects on exciton and a localized interband transition for both systems (ZnO film on Pt and ZnO film on quartz). In Cu-doped ZnO film, electronic blocking of exciton by Pt plasmon is more pronounce rather than screening effect by interband transition. Our results show the importance of plasmon from substrate and doping to modify the optical properties of wide bandgap semiconductor.

  8. A high throughput approach to quantify protein adsorption on combinatorial metal/metal oxide surfaces using electron microprobe and spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Byrne, T.; Lohstreter, L.; Filiaggi, M. J.; Bai, Zhijun; Dahn, J. R.

    2008-09-01

    Although metallic biomaterials are widely used, systematic studies of protein adsorption onto such materials are generally lacking. Combinatorial binary films of Al 1-xTi x and Al 1-xNb x (0 ⩽ x ⩽ 1) and corresponding pure element films were produced on glass substrates using a unique magnetron sputtering technique. Fibrinogen and albumin adsorption amounts were measured by wavelength-dispersive spectroscopy (WDS) and spectroscopic ellipsometry (SE) equipment, both high throughput techniques with automated motion stage capabilities. X-ray diffraction revealed that the binary films have crystalline phases present near the ends of the compositional gradient with an amorphous region throughout the interior of the gradient. X-ray photoelectron spectroscopy provided the surface chemistry along the binary films and showed that Al 2O 3 preferentially formed at the surface. Protein adsorption onto these films was found to be closely correlated to the alumina surface fraction, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen and albumin. Protein adsorption amounts obtained with WDS and SE were in excellent agreement for all films. This suggests that this combinatorial materials approach combined with these state-of-the-art, automated high throughput instruments provides a novel way to accurately monitor protein adsorption taking place at the surfaces of these metal/metal oxide materials.

  9. Sensitivity analysis and line edge roughness determination of 28-nm pitch silicon fins using Mueller matrix spectroscopic ellipsometry-based optical critical dimension metrology

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya; O'Mullane, Samuel; Sunkoju, Sravan; Gottipati, Abhishek; Hosler, Erik R.; Kamineni, Vimal; Preil, Moshe; Keller, Nick; Race, Joseph; Muthinti, Gangadhara Raja; Diebold, Alain C.

    2015-07-01

    Measurement and control of line edge roughness (LER) is one of the most challenging issues facing patterning technology. As the critical dimensions (CDs) of patterned structures decrease, an LER of only a few nanometers negatively impacts device performance. Here, Mueller matrix (MM) spectroscopic ellipsometry-based scatterometry is used to characterize LER in periodic line-space structures in 28-nm pitch Si fin samples fabricated by directed self-assembly patterning. The optical response of the MM elements is influenced by structural parameters like pitch, CDs, height, and side-wall angle, as well as the optical properties of the materials. Evaluation and decoupling MM element response to LER from other structural parameters requires sensitivity analysis using scatterometry models that include LER. Here, an approach is developed that can be used to characterize LER in Si fins by comparing the optical responses generated by systematically varying the grating shape and measurement conditions. Finally, the validity of this approach is established by comparing the results obtained from power spectral density analysis of top down scanning electron microscope images and cross-sectional transmission electron microscope image of the 28-nm pitch Si fins.

  10. In situ real-time studies of oxygen incorporation in complex oxide thin films using spectroscopic ellipsometry and ion scattering and recoil spectrometry

    SciTech Connect

    Mueller, A. H.; Gao, Y.; Irene, E. A.; Auciello, O.; Krauss, A. R.; Achultz, J. A.

    2000-05-25

    The surface termination of c-axis oriented YBa{sub 2}Cu{sub 3}O{sub 7{minus}{delta}} (YBCO) and the oxygen incorporation mechanism has been investigated using a unique combination of spectroscopic ellipsometry (SE) and time of flight ion scattering and recoil spectrometry (ToF-ISARS). The high surface sensitivity of the ToF-ISARS technique combined with the bulk oxygen sensitivity of SE are shown to yield complimentary information. The SE provided the film orientation and quality, while ToF-ISARS supplied surface compositional and structural information and enabled isotopic {sup 18}O tracer studies. It was determined that the O content of the film had little effect on the surface termination of the film, indicating a lack of labile Cu(1) sites at the c-axis oriented YBCO surface. Also, strong evidence for a Ba or BaO terminated structure is shown. The data related to the {sup 18}O tracer studies indicate that O from the reaction ambient incorporates only into the labile Cu(1) sites during both deposition and annealing, while stable O sites were populated with O from the sputtered target, indicating either the need for sputtered atomic O or sputtered YCuO complexes to occupy the stable Cu(2) sites.

  11. In-depth characterization and computational 3D reconstruction of flagellar filament protein layer structure based on in situ spectroscopic ellipsometry measurements

    NASA Astrophysics Data System (ADS)

    Kozma, Peter; Kozma, Daniel; Nemeth, Andrea; Jankovics, Hajnalka; Kurunczi, Sandor; Horvath, Robert; Vonderviszt, Ferenc; Fried, Miklos; Petrik, Peter

    2011-06-01

    In this study, we have reconstructed the statistical 3D structure of hundreds of nanometers thick surface immobilized flagellar filament protein layers in their native environment, in buffer solution. The protein deposition onto the surface activated Ta 2O 5 film was performed in a flow cell, and the immobilization process was followed by in situ spectroscopic ellipsometry. A multilayer optical model was developed, in that the protein layer was described by five effective medium sublayers. Applying this method, an in-depth analysis of the protein layer formation was performed. Based on the kinetics in the distribution of the surface mass density, the statistical properties of the filamentous film could be determined computationally as a function of the measurement time. It was also demonstrated that the 3D structure of the protein layer can be reconstructed based on the calculated in-depth mass density profile. The computational investigation revealed that the filaments can be classified into two individual groups in approximately equal ratio according to their orientation. In the first group the filaments are close to laying position, whereas in the second group they are in a standing position, resulting in a significantly denser sublayer close to the substrate than at a larger distance.

  12. Complex Refractive Index Spectra of CH3NH3PbI3 Perovskite Thin Films Determined by Spectroscopic Ellipsometry and Spectrophotometry.

    PubMed

    Löper, Philipp; Stuckelberger, Michael; Niesen, Bjoern; Werner, Jérémie; Filipič, Miha; Moon, Soo-Jin; Yum, Jun-Ho; Topič, Marko; De Wolf, Stefaan; Ballif, Christophe

    2015-01-02

    The complex refractive index (dielectric function) of planar CH3NH3PbI3 thin films at room temperature is investigated by variable angle spectroscopic ellipsometry and spectrophotometry. Knowledge of the complex refractive index is essential for designing photonic devices based on CH3NH3PbI3 thin films such as solar cells, light-emitting diodes, or lasers. Because the directly measured quantities (reflectance, transmittance, and ellipsometric spectra) are inherently affected by multiple reflections, the complex refractive index has to be determined indirectly by fitting a model dielectric function to the experimental spectra. We model the dielectric function according to the Forouhi-Bloomer formulation with oscillators positioned at 1.597, 2.418, and 3.392 eV and achieve excellent agreement with the experimental spectra. Our results agree well with previously reported data of the absorption coefficient and are consistent with Kramers-Kronig transformations. The real part of the refractive index assumes a value of 2.611 at 633 nm, implying that CH3NH3PbI3-based solar cells are ideally suited for the top cell in monolithic silicon-based tandem solar cells.

  13. Optical properties of silicon nanocrystals embedded in Si3N4 matrix measured by spectroscopic ellipsometry and UV-Vis-NIR spectroscopy

    NASA Astrophysics Data System (ADS)

    Barbé, J.; Despax, B.; Perraud, S.; Makasheva, K.

    2014-04-01

    In this paper, we report a spectroscopic ellipsometry study of the optical properties of silicon nanocrystals (Si-ncs) embedded in silicon nitride matrix. The nanocomposite thin-films were elaborated by radiofrequency plasma enhanced chemical vapor deposition from ammonia and silane precursors, followed by high temperature annealing. Bruggeman effective medium approximation combined with the Tauc-Lorentz dispersion law was found to be an appropriate model in describing the ellipsometric data, and provided a fine determination of the dielectric functions or complex permittivity of Si-ncs embedded in silicon nitride. It is shown that the dielectric functions of Si-ncs undergo a large reduction in amplitude and broadening compared to the dielectric function of the bulk crystalline Si. Consequently to the disappearance of direct transition energy E 1 and E 2, the imaginary part ɛ 2 of the dielectric function of Si-ncs exhibits a single line shape centered between E 1 and E 2. With decreasing Si-ncs size, we observe a red-shift of ɛ 2 which cannot be attributed to bandgap expansion, but is better explained by electron-phonon interactions in the case of a Si3N4 matrix with high Young modulus. According to Tauc-Lorentz dispersion law, the obtained bandgap values of Si-ncs are between 1.58 eV and 1.67 eV for Si-ncs with diameters from 4.6 nm to 3.8 nm, which is in good agreement with measurements from UV-Vis-NIR spectroscopy.

  14. Spectroscopic ellipsometry determination of the optical constants of titanium-doped WO{sub 3} films made by co-sputter deposition

    SciTech Connect

    Vargas, M.; Rubio, E. J.; Gutierrez, A.; Ramana, C. V.

    2014-04-07

    Titanium (Ti) doped tungsten oxide (WO{sub 3}) thin films were grown by co-sputter deposition of W and Ti metal targets. The sputtering powers to the W and Ti were kept constant at 100 W and 50 W, respectively, while varying the growth temperature (T{sub s}) in the range of 25–400 °C. The structural quality of Ti-doped WO{sub 3} films is dependent on T{sub s}. Ti-doped WO{sub 3} films grown at T{sub s} < 400 °C were amorphous. A temperature of 400 °C is critical to promote the structural order and formation of monoclinic, nanocrystalline films. The optical constants and their dispersion profiles determined from spectroscopic ellipsometry indicate that there is no significant inter-diffusion at the film-substrate interface for W-Ti oxide film growth of ∼40 nm. The index refraction (n) at λ = 550 nm varies in the range of 2.15–2.40 with a gradual increase in T{sub s}. Lorentz-Lorenz analysis (n{sub (λ)} = 550 nm) of the data indicates the gradual improvement in the packing density coupled with structural transformation accounts for the observed optical quality of the Ti-doped WO{sub 3} films as a function of T{sub s}. A correlation between the growth conditions and optical constants is discussed.

  15. Spectroscopic ellipsometry study of the effect of illumination and thermal annealing on the optical constants of thin Ge-As-S films

    NASA Astrophysics Data System (ADS)

    Pamukchieva, V.; Szekeres, A.; Arsova, D.

    2011-02-01

    The effects of illumination and post-illumination thermal annealing on the optical properties of chalcogenide thin (~150 nm) films were studied by spectroscopic ellipsometry. The films were thermally evaporated from Ge30.8As5.7S63.5 and Ge32As5S63 glasses. They were exposed to illumination with an HBO 500 lamp and to subsequent thermal annealing at a temperature of 350 °C. Ellipsometric measurements in the spectral range 300-820 nm were carried out after each technological step. From the ellipsometric data analysis the optical constants (n, k, ɛ), optical band gap energy Eog and film thickness have been determined, while the oscillator energies E0 and Ed have been estimated applying the single-oscillator approximation theory. In the ɛ2 spectra three peaks, denoted by E1, E2 and E3, have appeared, which are attributed to interband transitions. By illumination, the values of the complex refractive index (\\tilde n = n - {\\rm{i}}k), dielectric function (\\skew3\\tilde \\varepsilon = \\varepsilon _1 - {\\rm{i}}\\varepsilon _{\\rm{2}} ) and dispersion energy Ed decrease, whereas the band gap energy (Eog) and the oscillator energy (E0) values increase. All these are accompanied by a ~12-13% enhancement of film thickness. Thermal annealing leads to a further increase of the energetic parameters values, but causes a ~14-15% decrease of film thickness in comparison to that of illuminated films. The E1 and E2 peaks diminish on illumination and post-illumination annealing, whereas the magnitude of the E3 peak decreases on illumination and increases by annealing, approaching its initial value for the as-deposited state.

  16. Infrared Spectroscopic Imaging for Prostate Pathology

    DTIC Science & Technology

    2008-03-01

    1999) J Biomed Opt 4: 14 –21 13. Kidder LH, Kalasinsky VF , Luke JL, Levin IW, Lewis EN (1997) Nat Medicine 3:235–237 14 . Ellis DI, Goodacre R (2006...not display a currently valid OMB control number. PLEASE DO NOT RETURN YOUR FORM TO THE ABOVE ADDRESS. 1. REPORT DATE (DD-MM-YYYY) 14 -03-2008 2...REPORT TYPE Annual 3. DATES COVERED (From - To) 15 FEB 2007 - 14 FEB 2008 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER W81XWH-07-1-0242 Infrared

  17. Quantitative Infrared Spectroscopic Measurements of Boron Fluorides.

    DTIC Science & Technology

    1980-08-01

    1959). 35. D.M. Yost, D. Devault, T.F. Anderson, and E.N. Lassettre, J. Cher. Phys. 6, 424 (1938). 36. G. Herzberg , "Infrared and Raman Spectra...34 (Van Nostrand Reinhold, New York, 1945). 37. W.F. Edgell and R.E. Moynihan, 3. Chem. Phys. 45, 1205 (1966). 38. S.L. Gerhard and D.M. Dennison, Phys...positions for the 10BF isotope are shifted 0.7 cm to the red and are calculated according to Herzberg . The spectral slit encompasses 14 lines, R(8) through

  18. Ultrafast dynamic ellipsometry and spectroscopy of laser shocked materials

    SciTech Connect

    Bolme, Cynthia A; Mc Grane, Shawn D; Dang, Nhan C; Whitley, Von H; Moore, David S.

    2011-01-20

    Ultrafast dynamic ellipsometry is used to measure the material motion and changes in the optical refractive index of laser shock compressed materials. This diagnostic has shown us that the ultrafast laser driven shocks are the same as shocks on longer timescales and larger length scales. We have added spectroscopic diagnostics of infrared absorption, ultra-violet - visible transient absorption, and femtosecond stimulated Raman scattering to begin probing the initiation chemistry that occurs in shock reactive materials. We have also used the femtosecond stimulated Raman scattering to measure the vibrational temperature of materials using the Stokes gain to anti-Stokes loss ratio.

  19. Vibrational Spectroscopic Microscopy: Raman, Near-Infrared and Mid-Infrared Imaging Techniques

    NASA Astrophysics Data System (ADS)

    Lewis, E. Neil; Levin, Ira W.

    1995-02-01

    New instrumental approaches for performing vibrational Raman, near-infrared and mid-infrared spectroscopic imaging microscopy are described. The instruments integrate imaging quality filters such as acousto-optic tunable filters (AOTFs), with visible charge-coupled device (CCD) and infrared focal-plane array detectors. These systems are used in conjunction with infinity-corrected, refractive microscopes for operation in the visible and near-infrared spectral regions and with Cassegrainian reflective optics for operation in the mid-infrared spectral interval. Chemically specific images at moderate spectral resolution (2 nm) and high spatial resolution (1 [mu]m) can be collected rapidly and noninvasively. Image data are presented containing 128 × 128 pixels, although significantly larger format images can be collected in approximately the same time. The instruments can be readily configured for both absorption and reflectance spectroscopies. We present Raman emission images of polystyrene microspheres and a lipid/amino acid mixture and near-infrared images of onion epidermis and a hydrated phospholipid dispersion. Images generated from mid-infrared spectral data are presented for a KBr disk containing nonhomogeneous domains of lipid and for 50-[mu]m slices of monkey cerebellum. These are the first results illustrating the use of infrared focal-plane array detectors as chemically specific spectroscopic imaging devices and demonstrating their application in biomolecular areas. Extensions and future applications of the various vibrational spectroscopic imaging techniques are discussed.

  20. AKARI INFRARED CAMERA SURVEY OF THE LARGE MAGELLANIC CLOUD. II. THE NEAR-INFRARED SPECTROSCOPIC CATALOG

    SciTech Connect

    Shimonishi, Takashi; Onaka, Takashi; Kato, Daisuke; Sakon, Itsuki; Ita, Yoshifusa; Kawamura, Akiko; Kaneda, Hidehiro

    2013-02-01

    We performed a near-infrared spectroscopic survey toward an area of {approx}10 deg{sup 2} of the Large Magellanic Cloud (LMC) with the infrared satellite AKARI. Observations were carried out as part of the AKARI Large-area Survey of the Large Magellanic Cloud (LSLMC). The slitless multi-object spectroscopic capability of the AKARI/IRC enabled us to obtain low-resolution (R {approx} 20) spectra in 2-5 {mu}m for a large number of point sources in the LMC. As a result of the survey, we extracted about 2000 infrared spectra of point sources. The data are organized as a near-infrared spectroscopic catalog. The catalog includes various infrared objects such as young stellar objects (YSOs), asymptotic giant branch (AGB) stars, supergiants, and so on. It is shown that 97% of the catalog sources have corresponding photometric data in the wavelength range from 1.2 to 11 {mu}m, and 67% of the sources also have photometric data up to 24 {mu}m. The catalog allows us to investigate near-infrared spectral features of sources by comparison with their infrared spectral energy distributions. In addition, it is estimated that about 10% of the catalog sources are observed at more than two different epochs. This enables us to study a spectroscopic variability of sources by using the present catalog. Initial results of source classifications for the LSLMC samples are presented. We classified 659 LSLMC spectra based on their near-infrared spectral features by visual inspection. As a result, it is shown that the present catalog includes 7 YSOs, 160 C-rich AGBs, 8 C-rich AGB candidates, 85 O-rich AGBs, 122 blue and yellow supergiants, 150 red super giants, and 128 unclassified sources. Distributions of the classified sources on the color-color and color-magnitude diagrams are discussed in the text. Continuous wavelength coverage and high spectroscopic sensitivity in 2-5 {mu}m can only be achieved by space observations. This is an unprecedented large-scale spectroscopic survey toward the

  1. Phonon and free-charge carrier properties in group-III nitride heterostructures investigated by spectroscopic ellipsometry and optical Hall effect

    NASA Astrophysics Data System (ADS)

    Schoeche, Stefan

    The material class of group-III nitrides gained tremendous technological importance for optoelectronic and high-power/high-frequency amplification devices. Tunability of the direct band gap from 0.65 eV (InN) to 6.2 eV (AlN) by alloying, high breakthrough voltages and intrinsic mobilities, as well as the formation of highly mobile 2d electron gases (2DEG) at heterointerfaces make these compounds ideal for many applications. GaN and Ga-rich alloys are well studied and current research is mainly device-oriented. For example, choice and quality of the gate dielectric significantly influence device performance in high-electron mobility transistors (HEMT) which utilize highly mobile 2DEGs at heterointerfaces. Experimental access to the 2DEG channel properties without influence from parasitic currents or contact properties are desirable. In- and Al-rich ternary alloys are less explored than Ga-rich compounds. For InN and In-rich alloys, while many material parameters such as stiffness constants or effective mass values are largely unknown, reliable p-type doping is a major challenge, also because p-type conducting channels are buried within highly conductive n-type material formed at the surface and interfaces preventing electrical characterization. For AlN and high-Al content alloys, doping mechanisms are not understood and reliable fabrication of material with high free-charge carrier (FCC) concentrations was achieved just recently. Difficulties to form ohmic contacts impair electrical measurements and optical characterization is impeded by lack of high-energy excitation sources. In this work, spectroscopic ellipsometry over the wide spectral range from the THz to VUV in combination with optical Hall effect (generalized ellipsometry with applied magnetic field) from THz to MIR are applied in order to investigate the phonon modes and FCC properties in group-III nitride heterostructures. Adequate model descriptions and analysis strategies are introduced which allow

  2. Temperature-dependent phonon Raman scattering and spectroscopic ellipsometry of pure and Ca-doped Sr x Ba1-x Nb2O6 ferroelectric ceramics across the phase transition region

    NASA Astrophysics Data System (ADS)

    Peng, Liang; Jiang, Kai; Zhang, Jinzhong; Hu, Zhigao; Wang, Genshui; Dong, Xianlin; Chu, Junhao

    2016-01-01

    Optical phonons and the phase transition of relaxor ferroelectric ceramics Sr x Ba1-x Nb2O6 (SBN) and Ca y (Sr0.5Ba0.5)1-y Nb2O6 (CSBN) with different composition (0.3≤slant x≤slant 0.5 , 0.1≤slant y≤slant 0.2 ) have been investigated by variable-temperature Raman scattering and spectroscopic ellipsometry. The anomalous temperature dependence of Tauc gap energy (E t ) is used to fit the phonon energy dependence of the permittivity, and the Raman intensity of some interesting optical phonons can be ascribed to the phase transition from a ferroelectric to a paraelectric structure. The Curie temperature of SBN decreases from 556 to 359 K with increasing Sr composition, which can be attributed to the substitution of smaller Sr2+ for Ba2+. On increasing the Ca composition, however, the phase transition temperature of CSBN remains nearly unchanged at about 350 K. This could be due to the fact that most doped Ca2+ ions move into the oxygen ion site and exhibit no obvious effect on the vibrational properties. Therefore, the general disorder which results from Sr2+ substituting Ba2+ , dominates the phase transition process for SBN-based ferroelectric oxides. Meanwhile, the dielectric functions from 200 to 600 K have been evaluated with the aid of the Tauc-Lorentz model. The electronic transition is located at about 5 eV and decreases with increasing temperature for all the samples. Moreover, the phase transition temperature range derived from the spectroscopic ellipsometry agrees well with that from the Raman scattering. It reveals that the variation of the fundamental energy gap may be associated with the phase transition of SBN ceramics. Both Raman scattering and spectroscopic ellipsometry are proven to be a effective method of exploring the phase transition of ferroelectric oxides.

  3. Fundamental developments in infrared spectroscopic imaging for biomedical applications.

    PubMed

    Pilling, Michael; Gardner, Peter

    2016-04-07

    Infrared chemical imaging is a rapidly emerging field with new advances in instrumentation, data acquisition and data analysis. These developments have had significant impact in biomedical applications and numerous studies have now shown that this technology offers great promise for the improved diagnosis of the diseased state. Relying on purely biochemical signatures rather than contrast from exogenous dyes and stains, infrared chemical imaging has the potential to revolutionise histopathology for improved disease diagnosis. In this review we discuss the recent advances in infrared spectroscopic imaging specifically related to spectral histopathology (SHP) and consider the current state of the field. Finally we consider the practical application of SHP for disease diagnosis and consider potential barriers to clinical translation highlighting current directions and the future outlook.

  4. Synchrotron radiation-based far-infrared spectroscopic ellipsometer with full Mueller-matrix capability

    SciTech Connect

    Stanislavchuk, T. N.; Kang, T. D.; Rogers, P. D.; Standard, E. C.; Basistyy, R.; Nita, G.; Zhou, T.; Sirenko, A. A.; Kotelyanskii, A. M.; Carr, G. L.; Kotelyanskii, M.

    2013-02-15

    We developed far-IR spectroscopic ellipsometer at the U4IR beamline of the National Synchrotron Light Source in Brookhaven National Laboratory. This ellipsometer is able to measure both, rotating analyzer and full-Mueller matrix spectra using rotating retarders, and wire-grid linear polarizers. We utilize exceptional brightness of synchrotron radiation in the broad spectral range between about 20 and 4000 cm{sup -1}. Fourier-transform infrared (FT-IR) spectrometer is used for multi-wavelength data acquisition. The sample stage has temperature variation between 4.2 and 450 K, wide range of {theta}-2{theta} angular rotation, {chi} tilt angle adjustment, and X-Y-Z translation. A LabVIEW-based software controls the motors, sample temperature, and FT-IR spectrometer and also allows to run fully automated experiments with pre-programmed measurement schedules. Data analysis is based on Berreman's 4 Multiplication-Sign 4 propagation matrix formalism to calculate the Mueller matrix parameters of anisotropic samples with magnetic permeability {mu}{ne} 1. A nonlinear regression of the rotating analyzer ellipsometry and/or Mueller matrix (MM) spectra, which are usually acquired at variable angles of incidence and sample crystallographic orientations, allows extraction of dielectric constant and magnetic permeability tensors for bulk and thin-film samples. Applications of this ellipsometer setup for multiferroic and ferrimagnetic materials with {mu}{ne} 1 are illustrated with experimental results and simulations for TbMnO{sub 3} and Dy{sub 3}Fe{sub 5}O{sub 12} single crystals. We demonstrate how magnetic and electric dipoles, such as magnons and phonons, can be distinguished from a single MM measurement without adducing any modeling arguments. The parameters of magnetoelectric components of electromagnon excitations are determined using MM spectra of TbMnO{sub 3}.

  5. Synchrotron radiation-based far-infrared spectroscopic ellipsometer with full Mueller-matrix capability.

    PubMed

    Stanislavchuk, T N; Kang, T D; Rogers, P D; Standard, E C; Basistyy, R; Kotelyanskii, A M; Nita, G; Zhou, T; Carr, G L; Kotelyanskii, M; Sirenko, A A

    2013-02-01

    We developed far-IR spectroscopic ellipsometer at the U4IR beamline of the National Synchrotron Light Source in Brookhaven National Laboratory. This ellipsometer is able to measure both, rotating analyzer and full-Mueller matrix spectra using rotating retarders, and wire-grid linear polarizers. We utilize exceptional brightness of synchrotron radiation in the broad spectral range between about 20 and 4000 cm(-1). Fourier-transform infrared (FT-IR) spectrometer is used for multi-wavelength data acquisition. The sample stage has temperature variation between 4.2 and 450 K, wide range of θ-2θ angular rotation, χ tilt angle adjustment, and X-Y-Z translation. A LabVIEW-based software controls the motors, sample temperature, and FT-IR spectrometer and also allows to run fully automated experiments with pre-programmed measurement schedules. Data analysis is based on Berreman's 4 × 4 propagation matrix formalism to calculate the Mueller matrix parameters of anisotropic samples with magnetic permeability μ ≠ 1. A nonlinear regression of the rotating analyzer ellipsometry and∕or Mueller matrix (MM) spectra, which are usually acquired at variable angles of incidence and sample crystallographic orientations, allows extraction of dielectric constant and magnetic permeability tensors for bulk and thin-film samples. Applications of this ellipsometer setup for multiferroic and ferrimagnetic materials with μ ≠ 1 are illustrated with experimental results and simulations for TbMnO3 and Dy3Fe5O12 single crystals. We demonstrate how magnetic and electric dipoles, such as magnons and phonons, can be distinguished from a single MM measurement without adducing any modeling arguments. The parameters of magnetoelectric components of electromagnon excitations are determined using MM spectra of TbMnO3.

  6. Infrared Imaging, Spectroscopic, and Photometric Studies of Comets

    NASA Technical Reports Server (NTRS)

    Gehrz, Robert D.

    1997-01-01

    We have continued our program of infrared (IR) photometric, imaging, spectroscopic, and polarimetric temporal observations of comets to study the properties of comet dust and comet nuclei. During the first two years we digitized our IR data base on P/Halley and other recent comets to facilitate further analysis and comparison with other data bases, and found compelling evidence for the emission of a burst of small grains from P/Halley's nucleus at perihelion. We reported imaging and photometric observations of Comets Austin 1990 V and Swift-Tuttle 1992. The Swift-Tuttle 1992t observations included IR photometry, several 7-14 micron long-slit spectra of the coma and a time-sequence of more than 150 10 micron broadband images of the coma. An analysis of near-IR images of the inner coma of P/Halley obtained on three consecutive nights in 1986 March showed sunwardjets. We completed our analysis of IR imaging spectrosco-photometric data on comets. We also obtained observations of Comets Hyakutake 1996 B2 and Hale/Bopp 1995 01. We obtained infrared imaging, photometric, spectroscopic and polarimetric temporal observations of bright comets using a network of five telescopes, with emphasis on simultaneous observations of comets at many wavelengths with different instruments. Our program offers several unique advantages: 1) rapid observational response to new comets with dedicated infrared telescopes; 2) observations within a few degrees of the sun when comets are near perihelion and 3) access to advanced infrared array imagers and spectrometers. In particular, reduction, analysis, publication and archiving of our Jupiter/sl-9 and Comet Hyakutake infrared data received special emphasis. Instrumentation development included installation of the latest version of the innovative FORTH telescope control and a data acquisition system that enables us to control three telescopes remotely by telephone from anywhere in the world for comet observations in broad daylight. We have

  7. Atmospheric and Spectroscopic Research in the Far Infrared

    NASA Technical Reports Server (NTRS)

    Park, Kwangjai

    1998-01-01

    The spectroscopic measurements of molecular parameters constitute one of the major areas of our research program. This part of our program has been conducted in close collaboration with Smithsonian Astrophysical Observatory (SAO) and National Institute of Standards and Technology (NIST). The references on HO2, OH, and O2 that appear on the publication list are examples of this type of work completed during the grant period. These pressure-broadening studies have provided the kind of improvements needed in the database for retrieving atmospheric profiles from far infrared limb sensing data. One example of this linkage between the pressure broadening studies and the improvements in data retrieval is described in the paper on HBr (paper #4, publication list). The retrieval of the concentration profile of this important species from the IBEX data was facilitated by a number of performance improvement factors, not the least of which was the database improvements.

  8. Analysis of Forensic Casework Utilizing Infrared Spectroscopic Imaging †

    PubMed Central

    Lanzarotta, Adam

    2016-01-01

    A search of the current scientific literature yields a limited number of studies that describe the use of Fourier transform infrared (FT-IR) spectroscopic imaging for the analysis of forensic casework, which is likely due to the fact that these instruments are fairly new commodities to the field of analytical chemistry and are therefore not yet commonplace in forensic laboratories. This report describes recent forensic case studies that have used the technique for determining the composition of a wide variety of multi-component sample types, including animal tissue sections for toxic inclusions, drugs/dietary supplements, an antibiotic with an active pharmaceutical ingredient (API) present as several different salt forms, an adulterated bulk API, unknown trace powders for illicit drugs and an ophthalmic solution suspected of being adulterated with bleach. PMID:26927101

  9. Analysis of Forensic Casework Utilizing Infrared Spectroscopic Imaging.

    PubMed

    Lanzarotta, Adam

    2016-02-24

    A search of the current scientific literature yields a limited number of studies that describe the use of Fourier transform infrared (FT-IR) spectroscopic imaging for the analysis of forensic casework, which is likely due to the fact that these instruments are fairly new commodities to the field of analytical chemistry and are therefore not yet commonplace in forensic laboratories. This report describes recent forensic case studies that have used the technique for determining the composition of a wide variety of multi-component sample types, including animal tissue sections for toxic inclusions, drugs/dietary supplements, an antibiotic with an active pharmaceutical ingredient (API) present as several different salt forms, an adulterated bulk API, unknown trace powders for illicit drugs and an ophthalmic solution suspected of being adulterated with bleach.

  10. Infrared and Raman spectroscopic features of plant cuticles: a review

    PubMed Central

    Heredia-Guerrero, José A.; Benítez, José J.; Domínguez, Eva; Bayer, Ilker S.; Cingolani, Roberto; Athanassiou, Athanassia; Heredia, Antonio

    2014-01-01

    The cuticle is one of the most important plant barriers. It is an external and continuous lipid membrane that covers the surface of epidermal cells and whose main function is to prevent the massive loss of water. The spectroscopic characterization of the plant cuticle and its components (cutin, cutan, waxes, polysaccharides and phenolics) by infrared and Raman spectroscopies has provided significant advances in the knowledge of the functional groups present in the cuticular matrix and on their structural role, interaction and macromolecular arrangement. Additionally, these spectroscopies have been used in the study of cuticle interaction with exogenous molecules, degradation, distribution of components within the cuticle matrix, changes during growth and development and characterization of fossil plants. PMID:25009549

  11. The molecular structure of chloritoid: a mid-infrared and near-infrared spectroscopic study.

    PubMed

    Li, Kuo; Liu, Qinfu; Cheng, Hongfei; Deng, Yutao; Frost, Ray L

    2015-06-15

    The mineral chloritoid collected from the argillite in the bottom of Yaopo Formation of Western Beijing was characterized by mid-infrared (MIR) and near-infrared (NIR) spectroscopy. The MIR spectra showed all fundamental vibrations including the hydroxyl units, basic aluminosilicate framework and the influence of iron on the chloritoid structure. The NIR spectrum of the chloritoid showed combination (ν+δ)OH bands with the fundamental stretching (ν) and bending (δ) vibrations. Based on the chemical component data and the analysis result from the MIR and NIR spectra, the crystal structure of chloritoid from western hills of Beijing, China, can be illustrated. Therefore, the application of the technique across the entire infrared region is expected to become more routine and extend its usefulness, and the reproducibility of measurement and richness of qualitative information should be simultaneously considered for proper selection of a spectroscopic method for the unit cell structural analysis.

  12. Extracting the complex optical conductivity of mono- and bilayer graphene by ellipsometry

    NASA Astrophysics Data System (ADS)

    Chang, You-Chia; Liu, Chang-Hua; Liu, Che-Hung; Zhong, Zhaohui; Norris, Theodore B.

    2014-06-01

    A method for analysis of spectroscopic ellipsometry data is demonstrated to extract the optical conductivity of mono- and bilayer chemical-vapor-deposited graphene. We model graphene as a truly two-dimensional (2D) material with a sheet conductivity, rather than a phenomenological effective refractive index as has been used in the literature. This technique measures both the real and imaginary part of the optical conductivity, which is important for graphene optoelectronics and metamaterials. Using this method, we obtain broadband measurements of the complex optical conductivity for mono- and bilayer graphene from ultraviolet to mid-infrared wavelengths. We also study how chemical doping with nitric acid modifies the complex optical conductivity.

  13. Temperature-dependent and anisotropic optical response of layered Pr0.5Ca1.5MnO4 probed by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Majidi, M. A.; Thoeng, E.; Gogoi, P. K.; Wendt, F.; Wang, S. H.; Santoso, I.; Asmara, T. C.; Handayani, I. P.; van Loosdrecht, P. H. M.; Nugroho, A. A.; Rübhausen, M.; Rusydi, A.

    2013-06-01

    We study the temperature dependence as well as anisotropy of optical conductivity (σ1) in the pseudocubic single crystal Pr0.5Ca1.5MnO4 using spectrocopic ellipsometry. Three transition temperatures are observed and can be linked to charge-orbital (TCO/OO˜320 K), two-dimensional-antiferromagnetic (2D-AFM) (˜200 K), and three-dimensional AFM (TN˜125 K) orderings. Below TCO/OO, σ1 shows a charge-ordering peak (˜0.8 eV) with a significant blue shift as the temperature decreases. Calculations based on a model that incorporates a static Jahn-Teller distortion and assumes the existence of a local charge imbalance between two different sublattices support this assignment and explain the blue shift. This view is further supported by the partial spectral weight analysis showing the onset of optical anisotropy at TCO/OO in the charge-ordering region (0.5-2.5 eV). Interestingly, in the charge-transfer region (2.5-4 eV), the spectral weight shows anomalies around the T2D-AFM that we attribute to the role of oxygen-p orbitals in stabilizing the CE-type magnetic ordering. Our result shows the importance of spin, charge, orbital, and lattice degrees of freedom in this layered manganite.

  14. Mid-infrared reflectivity and ellipsometry measurements on single-crystal YBa2Cu3O7 and Bi2Sr2CuO6+y

    NASA Astrophysics Data System (ADS)

    Watanabe, Yukio; Wang, Z. Z.; Lyon, S. A.; Tsui, D. C.; Ong, N. P.; Tarascon, J. M.; Barboux, P.

    1989-10-01

    We have measured the room-temperature reflectivity of ``90-K'' single crystals YBa2Cu3O7 in the frequency range 600-9000 cm-1. The reflectivity R in these highly conducting samples (ρab=150 μΩ cm at 290 K) is found to be higher than in previous reports. We fit R to a simple Drude-Lorentz model and compare the fit parameters with the dc transport values. (The effective-mass ratio of the carriers is found to be 2.0, and the scattering rate ħ/τ is 3.1kBT at room temperature.) Ellipsometry measurements have also been performed using transverse-electric and transverse-magnetic polarizations. The dielectric dispersion derived from ellipsometry shows some important deviations from the Drude-Lorentz model. Reflectivity data from nonsuperconducting crystals of Bi2Sr2CuO6+y are also reported.

  15. The Cassini mission: Infrared and microwave spectroscopic measurements

    NASA Technical Reports Server (NTRS)

    Kunde, V. G.

    1989-01-01

    The Cassini Orbiter and Titan Probe model payloads include a number of infrared and microwave instruments. This document describes: (1) the fundamental scientific objectives for Saturn and Titan which can be addressed by infrared and microwave instrumentation, (2) the instrument requirements and the accompanying instruments, and (3) the synergism resulting from the comprehensive coverage of the total infrared and microwave spectrum by the complement of individual instruments. The baseline consists of four instruments on the orbiter and two on the Titan probe. The orbiter infrared instruments are: (1) a microwave spectrometer and radiometer; (2) a far to mid-infrared spectrometer; (3) a pressure modulation gas correlation spectrometer, and (4) a near-infrared grating spectrometer. The two Titan probe infrared instruments are: (1) a near-infrared instrument, and (2) a tunable diode laser infrared absorption spectrometer and nephelometer.

  16. Near infrared spectroscopic imaging assessment of cartilage composition: Validation with mid infrared imaging spectroscopy.

    PubMed

    Palukuru, Uday P; Hanifi, Arash; McGoverin, Cushla M; Devlin, Sean; Lelkes, Peter I; Pleshko, Nancy

    2016-07-05

    Disease or injury to articular cartilage results in loss of extracellular matrix components which can lead to the development of osteoarthritis (OA). To better understand the process of disease development, there is a need for evaluation of changes in cartilage composition without the requirement of extensive sample preparation. Near infrared (NIR) spectroscopy is a chemical investigative technique based on molecular vibrations that is increasingly used as an assessment tool for studying cartilage composition. However, the assignment of specific molecular vibrations to absorbance bands in the NIR spectrum of cartilage, which arise from overtones and combinations of primary absorbances in the mid infrared (MIR) spectral region, has been challenging. In contrast, MIR spectroscopic assessment of cartilage is well-established, with many studies validating the assignment of specific bands present in MIR spectra to specific molecular vibrations. In the current study, NIR imaging spectroscopic data were obtained for compositional analysis of tissues that served as an in vitro model of OA. MIR spectroscopic data obtained from the identical tissue regions were used as the gold-standard for collagen and proteoglycan (PG) content. MIR spectroscopy in transmittance mode typically requires a much shorter pathlength through the sample (≤10 microns thick) compared to NIR spectroscopy (millimeters). Thus, this study first addressed the linearity of small absorbance bands in the MIR region with increasing tissue thickness, suitable for obtaining a signal in both the MIR and NIR regions. It was found that the linearity of specific, small MIR absorbance bands attributable to the collagen and PG components of cartilage (at 1336 and 856 cm(-1), respectively) are maintained through a thickness of 60 μm, which was also suitable for NIR data collection. MIR and NIR spectral data were then collected from 60 μm thick samples of cartilage degraded with chondroitinase ABC as a model

  17. Optical constants and band gap determination of Pb0.95La0.05Zr0.54Ti0.46O3 thin films using spectroscopic ellipsometry and UV-visible spectroscopy

    NASA Astrophysics Data System (ADS)

    Batra, Vaishali; Kotru, Sushma; Varagas, M.; Ramana, C. V.

    2015-11-01

    We report the structural evolution and optical properties of lanthanum doped lead zirconate titanate (PLZT) thin films prepared on Pt/TiO2/SiO2/Si substrates by chemical solution deposition. X-ray diffraction demonstrates the post-deposition annealing induced crystallization for PLZT films annealed in a temperature (Ta) range of 550-750 °C. PLZT films annealed at higher temperature exhibit polycrystalline structure along with larger grain size. Optical band gap (Eg) values determined from UV-visible spectroscopy and spectroscopic ellipsometry (SE) for PLZT films were found to be in the range of 3.5-3.8 eV. Eg decreases with increasing Ta. The optical constants and their dispersion profiles for PLZT films were also determined from SE analyses. PLZT films show an index of refraction in the range of 2.46-2.50 (λ = 632.8 nm) with increase in Ta. The increase in refractive index at higher Ta is attributed to the improved packing density and crystallinity with the temperature.

  18. Spectroscopic ellipsometry thin film and first-principles calculations of electronic and linear optical properties of [(C9H19NH3)2PbI2Br2] 2D perovskite

    NASA Astrophysics Data System (ADS)

    Abid, H.; Hlil, E. K.; Abid, Y.

    2017-03-01

    In this study we report results of first-principles density functional calculations using the full-potential linearized augmented plane wave (FP-LAPW) method as implemented in the WIEN2K code. We employed the generalized gradient approximation (GGA) for the exchange-correlation energy to calculate electronic and linear optical properties of the (C9H19NH3)2PbI2Br2 compound. The linear optical properties, namely, the real ε1 (ω) and imaginary ε2 (ω) parts of dielectric function, the refractive index n (ω) and the extinction coefficient k (ω) are calculated and compared with experimental spectroscopic ellipsometry spectra. The reflectivity R (ω) and electron energy loss function L (ω) are calculated too. Our calculations performed for band structure and density of states show that the valence band maximum and conduction band minimum are located at Γ point resulting in a direct band gap of about (Γv -Γc) of 2.42 eV in good agreement with the experimental data. The investigated compound has a large uniaxial anisotropy of the dielectric function of about 0.0739 and a negative birefringence at zero energy Δn (0) =-0.11.

  19. Optical properties of amorphous and crystalline Sb-doped SnO2 thin films studied with spectroscopic ellipsometry: Optical gap energy and effective mass

    NASA Astrophysics Data System (ADS)

    So, Hyeon Seob; Park, Jun-Woo; Jung, Dae Ho; Ko, Kun Hee; Lee, Hosun

    2015-08-01

    We investigated the optical properties of amorphous and crystalline antimony (Sb)-doped tin dioxide (SnO2) thin films grown using the co-sputtering deposition method at room temperature. We used undoped and Sb-doped (8 wt. %) SnO2 targets. Varying the relative power ratio of the two targets, we controlled the Sb-composition of the SnO2:Sb thin films up to 2.3 at. % of Sb contents. Through annealing, the as-grown amorphous SnO2:Sb thin films were transformed to crystalline thin films. Dielectric functions were obtained from the measured ellipsometry angles, Ψ and Δ, using the Drude and parametric optical constant models. We determined the absorption coefficients and optical gap energies of the SnO2:Sb thin films from the dielectric functions. We found increasing optical gap energy with increasing Sb composition. Increases in the Drude tail amplitudes, a signature of free carrier concentrations, were found in annealed, crystalline thin films with increasing Sb composition. The increase in the optical gap energy with increasing Sb composition was mainly attributed to the Burstein-Moss effect. Using Hall effect measurements, we obtained Hall carrier concentrations (NHall) and electron Hall mobilities (μHall). The carrier concentrations and mobilities increased from 2.6 × 1019 cm-3 and 1.0 cm2/(V s) to 2.0 × 1020 cm-1 and 7.2 cm2/(V s), respectively, with increasing Sb contents. This result suggests that the nominally undoped SnO2 films are unintentionally n-type doped. Assuming that the NHall and optical carrier concentrations (Nopt) were the same, we obtained the effective masses of the SnO2:Sb thin films with increasing Sb compositions. The effective masses of the SnO2:Sb thin films increased from 0.245 m0 to 0.4 m0 with increasing Sb doping contents, and the nonparabolicity of the conduction band was estimated. We discussed the relation between the optical (μopt) and Hall (μHall) mobilities as a function of Sb contents and grain sizes.

  20. Optical properties of amorphous and crystalline Sb-doped SnO{sub 2} thin films studied with spectroscopic ellipsometry: Optical gap energy and effective mass

    SciTech Connect

    So, Hyeon Seob; Park, Jun-Woo; Jung, Dae Ho; Ko, Kun Hee; Lee, Hosun

    2015-08-28

    We investigated the optical properties of amorphous and crystalline antimony (Sb)-doped tin dioxide (SnO{sub 2}) thin films grown using the co-sputtering deposition method at room temperature. We used undoped and Sb-doped (8 wt. %) SnO{sub 2} targets. Varying the relative power ratio of the two targets, we controlled the Sb-composition of the SnO{sub 2}:Sb thin films up to 2.3 at. % of Sb contents. Through annealing, the as-grown amorphous SnO{sub 2}:Sb thin films were transformed to crystalline thin films. Dielectric functions were obtained from the measured ellipsometry angles, Ψ and Δ, using the Drude and parametric optical constant models. We determined the absorption coefficients and optical gap energies of the SnO{sub 2}:Sb thin films from the dielectric functions. We found increasing optical gap energy with increasing Sb composition. Increases in the Drude tail amplitudes, a signature of free carrier concentrations, were found in annealed, crystalline thin films with increasing Sb composition. The increase in the optical gap energy with increasing Sb composition was mainly attributed to the Burstein-Moss effect. Using Hall effect measurements, we obtained Hall carrier concentrations (N{sub Hall}) and electron Hall mobilities (μ{sub Hall}). The carrier concentrations and mobilities increased from 2.6 × 10{sup 19 }cm{sup −3} and 1.0 cm{sup 2}/(V s) to 2.0 × 10{sup 20 }cm{sup −1} and 7.2 cm{sup 2}/(V s), respectively, with increasing Sb contents. This result suggests that the nominally undoped SnO{sub 2} films are unintentionally n-type doped. Assuming that the N{sub Hall} and optical carrier concentrations (N{sub opt}) were the same, we obtained the effective masses of the SnO{sub 2}:Sb thin films with increasing Sb compositions. The effective masses of the SnO{sub 2}:Sb thin films increased from 0.245 m{sub 0} to 0.4 m{sub 0} with increasing Sb doping contents, and the nonparabolicity of the conduction band was estimated. We

  1. IN SITU Analysis Of The Growth Of Semiconductor Materials By Phase Modulated Ellipsometry From UV To IR

    NASA Astrophysics Data System (ADS)

    Drevillon, Bernard

    1990-02-01

    Examples of applications of in situ spectroscopic polarization techniques (from UV to IR) to the study of the growth of semiconductor materials are presented. The high sensitivity of these in situ diagnostics is emphasized. In particular, the ability of kinetic ellipsometry in the UV range, to study interfaces involving reactive processes like plasma deposition, with submonolayer resolution, is described. In the UV-visible range, it is shown that reflectance-difference spectroscopy (RDS) allows the real-time characterization of crystalline III-V materials and heterojunctions. In the infrared, ellipsometry appears particularly well adapted for performing detailed analysis of the vibrational properties and the growth processes of amorphous thin films. Such sensitivity to film deposition mechanisms illustrates the capacity of real-time optical diagnostics for fundamental studies and in situ control process.

  2. Raman and infrared spectroscopic study of turquoise minerals.

    PubMed

    Čejka, Jiří; Sejkora, Jiří; Macek, Ivo; Malíková, Radana; Wang, Lina; Scholz, Ricardo; Xi, Yunfei; Frost, Ray L

    2015-10-05

    Raman and infrared spectra of three well-defined turquoise samples, CuAl6(PO4)4(OH)8·4H2O, from Lavender Pit, Bisbee, Cochise county, Arizona; Kouroudaiko mine, Faleme river, Senegal and Lynch Station, Virginia were studied, interpreted and compared. Observed Raman and infrared bands were assigned to the stretching and bending vibrations of phosphate tetrahedra, water molecules and hydroxyl ions. Approximate O-H⋯O hydrogen bond lengths were inferred from the Raman and infrared spectra. No Raman and infrared bands attributable to the stretching and bending vibrations of (PO3OH)(2-) units were observed.

  3. Raman and infrared spectroscopic study of turquoise minerals

    NASA Astrophysics Data System (ADS)

    Čejka, Jiří; Sejkora, Jiří; Macek, Ivo; Malíková, Radana; Wang, Lina; Scholz, Ricardo; Xi, Yunfei; Frost, Ray L.

    2015-10-01

    Raman and infrared spectra of three well-defined turquoise samples, CuAl6(PO4)4(OH)8·4H2O, from Lavender Pit, Bisbee, Cochise county, Arizona; Kouroudaiko mine, Faleme river, Senegal and Lynch Station, Virginia were studied, interpreted and compared. Observed Raman and infrared bands were assigned to the stretching and bending vibrations of phosphate tetrahedra, water molecules and hydroxyl ions. Approximate O-H⋯O hydrogen bond lengths were inferred from the Raman and infrared spectra. No Raman and infrared bands attributable to the stretching and bending vibrations of (PO3OH)2- units were observed.

  4. Near- and mid-infrared spectroscopic determination of algal composition

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objective of this study was to investigate the feasibility of using near-infrared reflectance spectroscopy (NIRS) and mid-infrared reflectance spectroscopy (MIRS) to determine the composition of algal samples. We assayed a set of algal biomass samples (n=117), collected from algae turf scrubber...

  5. Near-infrared spectroscopic tissue imaging for medical applications

    DOEpatents

    Demos, Stavros; Staggs, Michael C.

    2006-12-12

    Near infrared imaging using elastic light scattering and tissue autofluorescence are explored for medical applications. The approach involves imaging using cross-polarized elastic light scattering and tissue autofluorescence in the Near Infra-Red (NIR) coupled with image processing and inter-image operations to differentiate human tissue components.

  6. Near-infrared spectroscopic tissue imaging for medical applications

    DOEpatents

    Demos; Stavros , Staggs; Michael C.

    2006-03-21

    Near infrared imaging using elastic light scattering and tissue autofluorescence are explored for medical applications. The approach involves imaging using cross-polarized elastic light scattering and tissue autofluorescence in the Near Infra-Red (NIR) coupled with image processing and inter-image operations to differentiate human tissue components.

  7. Infrared imaging-spectroscopic observations of Venus atmosphere

    NASA Astrophysics Data System (ADS)

    Ohtsuki, Shoko; Sagawa, Hideo; Ueno, Munetaka

    2005-01-01

    We present a report on our recent observations of Venus atmosphere which we have performed in infrared wavelength at Okayama Astrophysical Observatory. The data show important results on the CO distribution and on O2 IRA (0,0) 1.27μm airglow in the atmosphere. The infrared windows of the Venusian atmosphere are rather developing areas and will give us important information on the dynamics of Venus atmosphere.

  8. Spectroscopic ellipsometry of Zn(1-x)Cu(x)O thin films based on a modified sol-gel dip-coating technique.

    PubMed

    Al-Khanbashi, Hibah A; Shirbeeny, W; Al-Ghamdi, A A; Bronstein, Lyudmila M; Mahmoud, Waleed E

    2014-01-24

    Nanocrystalline Zn(1-x)Cu(x)O thin films (x=0, 0.01, 0.02, 0.03, 0.04 and 0.05) were synthesized by sol-gel dip-coating technique on a quartz substrate. These films were annealed at 350°C for 2 h. The X-ray diffraction showed a hexagonal crystal structure with high intensity peak for the (002) reflection plane indicating preferential growth along the c-axis of the crystal lattice. The peak position related to the (002) peak was shifted as a result of the copper ion incorporation, confirming the interstitial substitution of the zinc ions by the copper ions. This interstitial substitution leads to a decrease of an average crystallite size and lattice constants and an increase of the micro-strain up to 2 at.% of the copper amount. The surface morphology was explored by scanning electron microscopy which confirmed the homogenous distribution of nanoparticles in the deposited films along the quartz substrates. The energy dispersion X-ray spectroscopy revealed absence of impurities in the as-deposited films. The high resolution electron microscopy and selected area electron diffraction depicted that the films have polycrystalline nature. The film thickness and optical constants of the Zn(1-x)Cu(x)O thin films were estimated by fitting the spectroscopic ellipsometric data (ψ and Δ) using three different models. The refractive index was fitted using harmonic oscillator model from which the oscillator and the dispersive energies were found. The dielectric constant, dielectric loss, energy loss functions were also determined.

  9. Spectroscopic ellipsometry of Zn1-xCuxO thin films based on a modified sol-gel dip-coating technique

    NASA Astrophysics Data System (ADS)

    Al-Khanbashi, Hibah A.; Shirbeeny, W.; Al-Ghamdi, A. A.; Bronstein, Lyudmila M.; Mahmoud, Waleed E.

    2014-01-01

    Nanocrystalline Zn1-xCuxO thin films (x = 0, 0.01, 0.02, 0.03, 0.04 and 0.05) were synthesized by sol-gel dip-coating technique on a quartz substrate. These films were annealed at 350 °C for 2 h. The X-ray diffraction showed a hexagonal crystal structure with high intensity peak for the (0 0 2) reflection plane indicating preferential growth along the c-axis of the crystal lattice. The peak position related to the (0 0 2) peak was shifted as a result of the copper ion incorporation, confirming the interstitial substitution of the zinc ions by the copper ions. This interstitial substitution leads to a decrease of an average crystallite size and lattice constants and an increase of the micro-strain up to 2 at.% of the copper amount. The surface morphology was explored by scanning electron microscopy which confirmed the homogenous distribution of nanoparticles in the deposited films along the quartz substrates. The energy dispersion X-ray spectroscopy revealed absence of impurities in the as-deposited films. The high resolution electron microscopy and selected area electron diffraction depicted that the films have polycrystalline nature. The film thickness and optical constants of the Zn1-xCuxO thin films were estimated by fitting the spectroscopic ellipsometric data (ψ and Δ) using three different models. The refractive index was fitted using harmonic oscillator model from which the oscillator and the dispersive energies were found. The dielectric constant, dielectric loss, energy loss functions were also determined.

  10. Fourier transform infrared spectroscopic analysis of cell differentiation

    NASA Astrophysics Data System (ADS)

    Ishii, Katsunori; Kimura, Akinori; Kushibiki, Toshihiro; Awazu, Kunio

    2007-02-01

    Stem cells and its differentiations have got a lot of attentions in regenerative medicine. The process of differentiations, the formation of tissues, has become better understood by the study using a lot of cell types progressively. These studies of cells and tissue dynamics at molecular levels are carried out through various approaches like histochemical methods, application of molecular biology and immunology. However, in case of using regenerative sources (cells, tissues and biomaterials etc.) clinically, they are measured and quality-controlled by non-invasive methods from the view point of safety. Recently, the use of Fourier Transform Infrared spectroscopy (FT-IR) has been used to monitor biochemical changes in cells, and has gained considerable importance. The objective of this study is to establish the infrared spectroscopy of cell differentiation as a quality control of cell sources for regenerative medicine. In the present study, as a basic study, we examined the adipose differentiation kinetics of preadipocyte (3T3-L1) and the osteoblast differentiation kinetics of bone marrow mesenchymal stem cells (Kusa-A1) to analyze the infrared absorption spectra. As a result, we achieved to analyze the adipose differentiation kinetics using the infrared absorption peak at 1739 cm-1 derived from ester bonds of triglyceride and osteoblast differentiation kinetics using the infrared absorption peak at 1030 cm-1 derived from phosphate groups of calcium phosphate.

  11. Infrared Spectroscopic Investigation on CH Bond Acidity in Cationic Alkanes

    NASA Astrophysics Data System (ADS)

    Matsuda, Yoshiyuki; Xie, Min; Fujii, Asuka

    2016-06-01

    We have demonstrated large enhancements of CH bond acidities in alcohol, ether, and amine cations through infrared predissociation spectroscopy based on the vacuum ultraviolet photoionization detection. In this study, we investigate for the cationic alkanes (pentane, hexane, and heptane) with different alkyl chain lengths. The σ electrons are ejected in the ionization of alkanes, while nonbonding electrons are ejected in ionization of alcohols, ethers, and amines. Nevertheless, the acidity enhancements of CH in these cationic alkanes have also been demonstrated by infrared spectroscopy. The correlations of their CH bond acidities with the alkyl chain lengths as well as the mechanisms of their acidity enhancements will be discussed by comparison of infrared spectra and theoretical calculations.

  12. Mid-infrared laser-spectroscopic sensing of chemical species

    PubMed Central

    Sigrist, Markus W.

    2014-01-01

    This letter reports on mid-infrared laser-based detection and analysis of chemical species. Emphasis is put on broadly tunable laser sources and sensitive detection schemes. Selected examples from our lab illustrate the performance and potential of such systems in various areas including environmental and medical sensing. PMID:26257952

  13. ISO Far-Infrared Spectroscopic Observations of Jupiter

    NASA Astrophysics Data System (ADS)

    Burgdorf, M. J.; Encrenaz, Th.; Feuchtgruber, H.; Davis, G. R.; Fouchet, Th.; Gautier, D.; Lellouch, E.; Orton, G. S.; Sidher, S. D.

    2001-07-01

    We present the far-infrared spectrum of Jupiter that was measured with the Short and Long Wavelength Spectrometers (SWS and LWS) aboard the Infrared Space Observatory (ISO). The region between 38 and 44 microns was observed in grating mode, where the SWS provides a spectral resolution of about 1300. For longer waves up to 197 microns the LWS-FP (Fabry-Perot) was used to achieve a resolution of several thousand. The observations were made between 23 and 26 May 1997 during ISO's revolutions 554, 556 and 557. The Jovian spectrum in the far-infrared is compared to an atmospheric radiative transfer model using expected values for the vertical profiles of the atmospheric constituents. Rotational transitions of ammonia and phosphine are responsible for the absorption features observed: Strong ammonia absorption manifolds are obvious against the background continuum slope, appearing at 39, 42, 46, 51, 56, 63, 72, 84, 100 and 125 microns in both the data and the model. Also PH3 features are present at the expected wavelengths of 113 and 141 microns in both the data and the model. This is the first time that most of these far-infrared features have been detected. The ISO observations are therefore of interest for the preparation of the planned submillimeter studies of the atmospheres of the Jovian planets with FIRST.

  14. Mid-infrared spectroscopic analysis of saccharides in aqueous solutions with sodium chloride.

    PubMed

    Kanou, Mikihito; Kameoka, Takaharu; Suehara, Ken-Ichiro; Hashimoto, Atsushi

    2017-04-01

    The infrared spectral characteristics of three different types of disaccharides (trehalose, maltose, and sucrose) and four different types of monosaccharides (glucose, mannose, galactose, and fructose) in aqueous solutions with sodium chloride (NaCl) were determined. The infrared spectra were obtained using the FT-IR/ATR method and the absorption intensities respected the interaction between the saccharide and water with NaCl were determined. This study also focused on not only the glycosidic linkage position and the constituent monosaccharides, but also the concentration of the saccharides and NaCl and found that they have a significant influence on the infrared spectroscopic characterization of the disaccharides in an aqueous solution with NaCl. The absorption intensities representing the interaction between a saccharide and water with NaCl were spectroscopically determined. Additionally, the applications of MIR spectroscopy to obtain information about saccharide-NaCl interactions in foods and biosystems were suggested.

  15. Palm-size wide-field Fourier spectroscopic imager with uncooled infrared microbolometer arrays for smartphone

    NASA Astrophysics Data System (ADS)

    Kawashima, Natsumi; Suzuki, Yo; Qi, Wei; Hosono, Satsuki; Saito, Tsubasa; Ogawa, Satoshi; Sato, Shun; Fujiwara, Masaru; Nishiyama, Akira; Wada, Kenji; Tanaka, Naotaka; Ishimaru, Ichiro

    2015-03-01

    We proposed the imaging-type 2-dimensional Fourier spectroscopy that is a near-common-path interferometer with strong robustness against mechanical vibrations. We introduced the miniature uncooled infrared microbolometer arrays for smartphone (e.g. product name: FILR ONE price: around 400USD). And we constructed the phase-shifter with the piezo impact drive mechanism (maker: Technohands.co.Ltd., stroke: 4.5mm, resolution: 0.01μm, size: 20mm, price: around 800USD). Thus, we realized the palm-size mid-infrared spectroscopic imager [size: L56mm×W69mm×H43mm weight: 500g]. And by using wide-angle lens as objective lens, the proposed method can obtain the wide-field 2- dimensional middle-infrared (wavelength: 7.5-13.5[μm]) spectroscopic imaging of radiation lights emitted from human bodies itself

  16. [Infrared spectroscopic analysis of Guilin watermelon frost products].

    PubMed

    Huang, Dong-lan; Chen, Xiao-kang; Xu, Yong-qun; Sun, Su-qin; Zhou, Qun; Lu, Wen-guan

    2012-08-01

    The objective of the present study is to analyze different products of Guilin watermelon frost by Fourier transform infrared spectroscopy (FTIR), second derivative infrared spectroscopy and two-dimensional correlation spectroscopy (2D-IR) under thermal perturbation. The structural information of the samples indicates that samples from the same factory but of different brands had some dissimilarities in the IR spectra, and the type and content of accessories of them were different compared with conventional IR spectra of samples, peaks at 638 and 616 cm(-1) all arise from anhydrous sodium sulfate in watermelon frost spray and watermelon frost capsule; the characteristic absorption peaks of the sucrose, dextrin or other accessories can be seen clearly in the spectra of watermelon frost throat-clearing buccal tablets, watermelon frost throat tablets and watermelon frost lozenge. And the IR spectra of watermelon frost lozenge is very similar to the IR spectra of sucrose, so it can be easily proved that the content of sucrose in watermelon frost lozenge is high. In the 2D-IR correlation spectra, the samples presented the differences in the position, number and relative intensity of autopeaks and correlation peak clusters. Consequently, the macroscopical fingerprint characters of FTIR, second derivative infrared spectra and 2D-IR spectra can not only provide the information about main chemical constituents in medical materials, but also analyze and identify the type and content of accessories in Guilin watermelon frost. In conclusion, the multi-steps IR macro-fingerprint method is rapid, effective, visual and accurate for pharmaceutical research.

  17. Infrared spectroscopic investigations of cationic ethanol, propanol, and butanol

    NASA Astrophysics Data System (ADS)

    Matsuda, Yoshiyuki; Harigaya, Hiroyuki; Xie, Min; Takahashi, Kaito; Fujii, Asuka

    2015-11-01

    Infrared spectroscopy of the alcohol cations of ethanol, propanol, and butanol was performed to investigate their structures and hyperconjugation mechanisms. In the ethanol cation, the Csbnd C bond hyperconjugates with the singly occupied molecular orbital (SOMO) at the oxygen atom, so that the Csbnd C bond weakens and the bond length elongates. Multiple hyperconjugations among SOMO, the Csbnd C bond, and the end Csbnd H bond occur in the propanol cation and enhance the acidity of the Csbnd H bond through the delocalization of its bonding σ electron. The butanol cation forms the oxonium-type structure through the proton transfer from the terminal CH bond.

  18. Infrared spectroscopic investigations of the compensatoin effect in ceramic materials

    SciTech Connect

    Vanina, E.A.; Kostyukov, N.S.

    1995-09-01

    The objective in this paper was to investigate by means of infrared spectroscopy samples of M-23 electrical porcelain ceramic after irradiation in a BOR-60 reactor with a neutron fluence of 6.5 x 10(exp 21)/square centimeter and isothermal annealing at 700 C and 1000 C for 10 hours. The work was performed on an IKS-29 spectrophotometer using samples in the form of a suspension in vasoline oil and pressed tablets with Potassium Bromide. The investigations were performed after the irradiated samples were allowed to stand for 7 years. It was found that partial amorphization of the quartz occurred.

  19. [Infrared spectroscopic study on leaf senescence of evergreen tree].

    PubMed

    Li, Lun; Zhou, Xiang-Ping; Liu, Gang; Zhang, Li; Ou, Quan-Hong; Hao, Jian-Ming

    2013-02-01

    In order to investigate plant physiological process of leaf senescence and aging, Fourier transform infrared (FTIR) spectroscopy was used to study the young, mature, and old yellow leaves from seven species of evergreen trees. The spectra of the leaves from different growing period are different in the region of 1 800-700 cm(-1). The absorption ratios A1 070/A2 927, A1 070/A1 160 were used to evaluate the relative changes of polysaccharides, and A1 318/A2 922 was used to estimate the change of calcium oxalate during leaf senescence. Decomposition and curve-fitting analysis was performed in the region of 1 800 -1 500 cm(-1). The sub-band absorption ratio H1 650/H1 740 was used to evaluate the relative changes of protein in the leaves. The results show that the accumulation and mobilization of polysaccharides, protein, and calcium oxalate during leaf growing period were different in different plant species. This study demonstrates the potential of mid-infrared spectroscopy for investigation of plants senescence, as well as physiological and biochemical changes of plants.

  20. Spitzer mid-infrared spectroscopic observations of planetary nebulae

    NASA Astrophysics Data System (ADS)

    Mata, H.; Ramos-Larios, G.; Guerrero, M. A.; Nigoche-Netro, A.; Toalá, J. A.; Fang, X.; Rubio, G.; Kemp, S. N.; Navarro, S. G.; Corral, L. J.

    2016-06-01

    We present Spitzer Space Telescope archival mid-infrared (mid-IR) spectroscopy of a sample of 11 planetary nebulae (PNe). The observations, acquired with the Spitzer Infrared Spectrograph (IRS), cover the spectral range 5.2-14.5 μm that includes the H2 0-0 S(2) to S(7) rotational emission lines. This wavelength coverage has allowed us to derive the Boltzmann distribution and calculate the H2 rotational excitation temperature (Tex). The derived excitation temperatures have consistent values ≃900 ± 70 K for different sources despite their different structural components. We also report the detection of mid-IR ionic lines of [Ar III], [S IV], and [Ne II] in most objects, and polycyclic aromatic hydrocarbon features in a few cases. The decline of the [Ar III]/[Ne II] line ratio with the stellar effective temperature can be explained either by a true neon enrichment or by high density circumstellar regions of PNe that presumably descend from higher mass progenitor stars.

  1. Infrared spectroscopic probing of dimethylamine clusters in an Ar matrix.

    PubMed

    Li, Siyang; Kjaergaard, Henrik G; Du, Lin

    2016-02-01

    Amines have many atmospheric sources and their clusters play an important role in aerosol nucleation processes. Clusters of a typical amine, dimethylamine (DMA), of different sizes were measured with matrix isolation IR (infrared) and NIR (near infrared) spectroscopy. The NIR vibrations are more separated and therefore it is easier to distinguish different sizes of clusters in this region. The DMA clusters, up to DMA tetramer, have been optimized using density functional methods, and the geometries, binding energies and thermodynamic properties of DMA clusters were obtained. The computed frequencies and intensities of NH-stretching vibrations in the DMA clusters were used to interpret the experimental spectra. We have identified the fundamental transitions of the bonded NH-stretching vibration and the first overtone transitions of the bonded and free NH-stretching vibration in the DMA clusters. Based on the changes in vibrational intensities during the annealing processes, the growth of clusters was clearly observed. The results of annealing processes indicate that DMA molecules tend to form larger clusters with lower energies under matrix temperatures, which is also supported by the calculated reaction energies of cluster formation.

  2. Infrared and visible ellipsometric studies of cholera toxin in ELISA structures

    NASA Astrophysics Data System (ADS)

    Thompson, Daniel W.; Pfeiffer, Galen L.; Berberov, Emil; Castro, Leon; Woollam, John A.

    2003-07-01

    Ellipsometry is well known for its extreme sensitivity to the presence and properties of ultra-thin films. In the infrared, resonance response to chemical bonds allows chemical identification in monolayer-thick biological films. In this paper we show results of attachment repeatability for successive layers of monosialoganglioside, cholera toxin, and related antibodies using in situ visible spectroscopic ellipsometry. Several factors contributing to difficulty in obtaining reproducible results are discussed. Soecifically, these include freshness of reagents; surface type, cleaning, and preparation; temperature; birefringence of liquid cell windows; and cell design. Sensitivity and signal noise considerations for infrared spectra of molecular monolayers are discussed.

  3. Infrared spectroscopic characteristics of normal and malignant colonic epithelium

    NASA Astrophysics Data System (ADS)

    Krupnik, Eduardo; Jackson, Michael; Bird, Ranjana P.; Smith, Ian C. P.; Mantsch, Henry H.

    1998-04-01

    IR spectroscopy is being widely used to study the biochemical changes associated with cancer. In particular, based upon the hypothesis that biochemical changes associated with cancer precede morphological manifestations of the disease, IR spectroscopy is being evaluated as a potential early diagnostic and prognostic tool. In the current study, IR spectroscopy was applied to the study of colon tissue from rats treated with the specific colon carcinogen azoxymethane, to determine whether tumor induction was associated with identifiable spectroscopic changes in the colon. Characteristic spectra were found for each layer of the colon. Spectra of normal-appearing mucosa and tumors form treated animals then compared to spectra of control mucosa. Differences between tumors and control mucosa were apparent, indicating changes in cellular biochemistry associated with tumor development. In particular, differences in absorptions attributed to nucleic acids were seen, indicating alterations in the structure of cellular DNA in malignant and carcinogen treated tissues. Interestingly, spectra of carcinogen treated rates exhibit characteristics intermediate between those of normal mucosa and tumors. Application of multivariate analysis allowed non-subjective classification of the spectra into three distinct classes with and accuracy of 86.7 percent. The separate classification of control and treated mucosa suggests that IR spectroscopy, when combined with the appropriate classifier, can indeed detect biochemical changes in tissue before physical manifestation of the disease process.

  4. Raman and infrared spectroscopic study of kamphaugite-(Y)

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo

    2015-05-01

    We have studied the carbonate mineral kamphaugite-(Y)(CaY(CO3)2(OH)·H2O), a mineral which contains yttrium and specific rare earth elements. Chemical analysis shows the presence of Ca, Y and C. Back scattering SEM appears to indicate a single pure phase. The vibrational spectroscopy of kamphaugite-(Y) was obtained using a combination of Raman and infrared spectroscopy. Two distinct Raman bands observed at 1078 and 1088 cm-1 provide evidence for the non-equivalence of the carbonate anion in the kamphaugite-(Y) structure. Such a concept is supported by the number of bands assigned to the carbonate antisymmetric stretching mode. Multiple bands in the ν4 region offers further support for the non-equivalence of carbonate anions in the structure. Vibrational spectroscopy enables aspects of the structure of the mineral kamphaugite-(Y) to be assessed.

  5. Thin film characterization using spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Alterovitz, Samuel A.

    1990-01-01

    The application of the multiple angle and wavelength (MAW) technique to measure the dielectric function of semiconducting films is discussed. This technique evaluates unambiguously the complex dielectric function, epsilon (E), of the film without any pre-assumptions. In some cases the effective medium approximation (EMA) was used to determine the volume fraction of the film components. Application of the MAW technique to several semiconducting films was published previously. Different applications and examples are given, including metal and insulator films.

  6. High-definition Fourier transform infrared spectroscopic imaging of breast tissue

    NASA Astrophysics Data System (ADS)

    Leslie, L. Suzanne; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2015-03-01

    Breast cancer diagnosis relies on staining serial sections of a biopsy in a process that can be time intensive and costly. Fourier transform infrared imaging (FT-IR) is a non-destructive, label-free chemical imaging technique that uses the vibrational structure of the biological molecules of the sample to provide contrast for images at any absorption peak in the mid-infrared. The full potential of spectroscopic imaging has been limited by the spatial resolution provided by most commercial instruments. By increasing the magnification and numerical aperture of the microscope, image pixel sizes on the order of 1.1 micron can be achieved, allowing HD FT-IR spectroscopic imaging to provide high quality images that could aid in histopathology, diagnosis, and studies of breast cancer progression.

  7. Spectroscopic research on infrared emittance of coal ash deposits

    SciTech Connect

    Saljnikov, Aleksandar; Komatina, Mirko; Gojak, Milan; Vucicevic, Biljana; Goricanec, Darko; Stevanovic, Zoran

    2009-11-15

    This paper deals with thermal radiation characteristics of ash deposits on a pulverized coal combustion boiler of an electric power plant. Normal emittance spectra in the near to medium infrared (2.5-25 {mu}m) region and total normal emittances were measured on four kinds of ground ash deposits. Measurements were conducted in the 570-1460 K temperature range which is common for boiler furnaces, by both heating and cooling the ash samples, with the aim to study the effect of their thermal history. Dependence of emittance on wavelength, temperature and chemical composition was studied, too. Samples were tested for transparency (opacity) to verify the accuracy of results. It was determined that the thicknesses used for the ash powders are opaque for infrared radiation for thicknesses in the order of a millimeter. Tests have shown that spectral emittance increases with an increase of wavelength with a characteristic pattern common for all samples. Spectral normal emittance increases strongly with temperature at shorter wavelengths and remains high and unchanged at longer ones. Emittance spectra are not very sensitive to chemical composition of ashes especially beyond {lambda} {approx} 5 {mu}m. With an increase of temperature, total emittance of the powdered sample decreases to a minimum value around 1200 K. Further temperature rise induces an increase of total emittance due to sintering in the ash. On cooling, the emittance increases monotonically following the hysteresis. Quantitative directions for evaluating thermal radiation characteristics of ash deposits for the merits of the safety design of boiler furnaces were proposed. That comprises correlating the experimentally obtained emittance spectra with curves of simple analytical form, i.e., a continuous function of minimum emittance vs. wavelength. The proposed method can be extended to other specimens from the same furnace and used to determine correlations for thermal calculation of old and design of new furnaces

  8. Fourier Transform Microwave and Infrared Spectroscopic Investigation of Propiolactone

    NASA Astrophysics Data System (ADS)

    Chen, Ziqiu; van Wijngaarden, Jennifer

    2009-06-01

    The pure rotational spectrum of the four-membered ester ring propiolactone (C{_3}H{_4}O{_2}) has been measured in a supersonic jet between 7 and 22 GHz using Fourier transform microwave (FTMW) spectroscopy. For the normal isotopologue, a total of 19 a- and b-type transitions have been recorded. Fifteen transitions due to three different ^{13}C isotopologues have also been observed. The microwave spectrum was analyzed to obtain an improved set of ground state rotational constants in comparison to earlier microwave experiments. The new set of rotational parameters was used to predict the rovibrational band structure of the lowest frequency modes of propiolactone. A total of 12 vibrational band origins have been observed between 400 and 1500 cm^{-1} using the far infrared beamline of the Canadian Light Source coupled to a Bruker IFS125HR spectrometer. The spectra were recorded with a resolution of 0.000969 cm^{-1} and although the intensities of the bands vary, 9 bands are of sufficient quality for complete rovibrational assignment. The progress of the assignment of this rich spectrum will be discussed. D. W. Boone, C O. Britt and J. E. Boggs J. Chem. Phys. 43 (1190), 1965.

  9. Infrared spectroscopic study of carrier scattering in gated CVD graphene

    NASA Astrophysics Data System (ADS)

    Yu, Kwangnam; Kim, Jiho; Kim, Joo Youn; Lee, Wonki; Hwang, Jun Yeon; Hwang, E. H.; Choi, E. J.

    2016-12-01

    We measured Drude absorption of gated CVD graphene using far-infrared transmission spectroscopy and determined the carrier scattering rate (γ ) as a function of the varied carrier density (n ). The n -dependent γ (n ) was obtained for a series of conditions systematically changed as (10 K, vacuum) → (300 K, vacuum) → (300 K, ambient pressure), which reveals that (1) at low-T, charged impurity (=A /√{n } ) and short-range defect (=B √{n } ) are the major scattering sources which constitute the total scattering γ =A /√{n }+B √{n } , (2) among various kinds of phonons populated at room-T , surface polar phonon of the SiO2 substrate is the dominantly scattering source, and (3) in air, the gas molecules adsorbed on graphene play a dual role in carrier scattering as charged impurity center and resonant scattering center. We present the absolute scattering strengths of those individual scattering sources, which provides the complete map of scattering mechanism of CVD graphene. This scattering map allows us to find out practical measures to suppress the individual scatterings, the mobility gains accompanied by them, and finally the ultimate attainable carrier mobility for CVD graphene.

  10. Near-Infrared Spectroscopic Study of V1647 Ori

    NASA Astrophysics Data System (ADS)

    Brittain, Sean D.; Rettig, Terrence W.; Simon, Theodore; Gibb, Erika L.; Liskowsky, Joseph

    2010-01-01

    We present new high-resolution infrared echelle spectra of V1647 Ori, the young star that illuminates McNeil's nebula. From the start, V1647 Ori has been an enigmatic source that has defied classification, in some ways resembling eruptive stars of the FUor class and in other respects the EXor variables. V1647 Ori underwent an outburst in 2003 before fading back to its pre-outburst brightness in 2006. In 2008, it underwent a new outburst. In this paper, we present high-resolution K-band and M-band spectra from the W. M. Keck Observatory that were acquired during the 2008 outburst. We compare the spectra to spectra acquired during the previous outburst and quiescent phases. We find that the luminosity and full width at half maximum power of Br γ increased as the star has brightened and decreased when the star faded, indicating that these phases are driven by variations in the accretion rate. We also show that the temperature of the CO emission has varied with the stellar accretion rate, confirming suggestions from modeling of the heating mechanisms of the inner disk. Finally, we find that the lowest energy blueshifted CO absorption lines originally reported in 2007 are no longer detected. The absence of these lines confirms the short-lived nature of the outflow launched at the start of the quiescent phase in 2006.

  11. Near-infrared spectroscopic approach to assess tissue viability following a thermal injury

    NASA Astrophysics Data System (ADS)

    Leonardi, Lorenzo; Sowa, Michael G.; Payette, Jeri R.; Hewko, Mark D.; Schattka, Bernhard J.; Matas, Anna; Mantsch, Henry H.

    2001-07-01

    A recurrent problem in the assessment of thermal injuries is the ability to accurately identify the depth and extent of injury. Generally, the depth of a burn injury determines and is inversely related to the ability of the skin to restore and regenerate itself. Burns involve damage to the dermis in varying amounts, reducing the dermal blood supply and altering the skin hemodynamics. Near infrared spectroscopic imaging was used to non-invasively assess the changes that occur in the early (1-3 h) post-burn period. The study used an accurate porcine model to investigate the potential of near infrared spectroscopic imaging to accurately distinguish between burns of varying severity. Data analysis was carried out using a two-way and three-way data decompositions techniques to investigate the spectral changes related to burns. Burn injuries drastically alter the physical and optical properties of the tissue. Thermal destruction of cutaneous vasculature disrupts perfusion and oxygen delivery to the affected tissue. The results demonstrated that near infrared spectroscopic imaging might provide a new tool for an objective clinical assessment of burn injuries.

  12. Rapid and label-free classification of human glioma cells by infrared spectroscopic imaging.

    PubMed

    Steiner, Gerald; Küchler, Saskia; Hermann, Andreas; Koch, Edmund; Salzer, Reiner; Schackert, Gabriele; Kirsch, Matthias

    2008-12-01

    The discrimination of cell types is a crucial task in cell biology. Available techniques, based on an irreversible treatment of the cells, do not allow a sensitive label-free characterization under in situ conditions. Infrared spectroscopic imaging is a new and useful tool for studying individual cells. It has established itself as a powerful method to probe the molecular composition and to indicate the biochemistry of cells. Monolayers of cultivated U343, T1115 and T508 human glioma cells were characterized using infrared spectroscopic imaging. A classification algorithm based on linear discriminant analysis was developed to distinguish different cells without labeling. The classification is based upon spectral features which mainly arise from proteins, nucleic acids, and cholesterol. An accuracy of 91% and 84% was obtained for cells of U343 and T1115, respectively. Cells of the T508 cell line exhibit some misclassifications resulting in a lower accuracy rate of 73%. As the results demonstrate, the potential of infrared spectroscopic imaging method to assess the overall molecular composition of cells in a non-destructive manner opens the possibility to characterize cells on a molecular level without labels or an irreversible treatment.

  13. Mid-Infrared and Near-Infrared Spectroscopic Properties of Fusarium Isolates: Effects of Culture Conditions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Fusarium genus includes soil saprobes as well as pathogenic or toxin-producing species. Traditional classification of Fusarium isolates is slow and requires a high level of expertise. The objective of this project is to describe culture condition effects on mid-infrared (MidIR) and near-infrared...

  14. Infrared and infrared emission spectroscopic study of typical Chinese kaolinite and halloysite.

    PubMed

    Cheng, Hongfei; Frost, Ray L; Yang, Jing; Liu, Qinfu; He, Junkai

    2010-12-01

    The structure and thermal stability between typical Chinese kaolinite and halloysite were analysed by X-ray diffraction (XRD), infrared spectroscopy, infrared emission spectroscopy (IES) and Raman spectroscopy. Infrared emission spectroscopy over the temperature range of 300-700°C has been used to characterise the thermal decomposition of both kaolinite and halloysite. Halloysite is characterised by two bands in the water bending region at 1629 and 1648 cm(-1), attributed to structural water and coordinated water in the interlayer. Well defined hydroxyl stretching bands at around 3695, 3679, 3652 and 3625 cm(-1) are observed for both kaolinite and halloysite. The 550°C infrared emission spectrum of halloysite is similar to that of kaolinite in 650-1350 cm(-1) spectral region. The infrared emission spectra of halloysite were found to be considerably different to that of kaolinite at lower temperatures. These differences are attributed to the fundamental difference in the structure of the two minerals.

  15. Fourier transform infrared and Raman spectroscopic characterization of homogeneous solution concentration gradients near a container wall at different temperatures

    NASA Technical Reports Server (NTRS)

    Loo, B. H.; Burns, D. H.; Lee, Y. G. L.; Emerson, M. T.

    1991-01-01

    Fourier transform infrared (FTIR) and Raman spectroscopic techniques were used to study the solution concentration gradient in succino nitrile-rich and water-rich homogeneous solutions. The spectroscopic data shows significant concentration dependency. Although FTIR-attenuated total reflectance could not yield surface spectra since the evanescent infrared wave penetrated deep into the bulk solution, it showed that water-rich clusters were decreased at higher temperatures. This result is consistent with the calorimetric results reported earlier.

  16. Mid - infrared solid state lasers for spectroscopic applications

    NASA Astrophysics Data System (ADS)

    Terekhov, Yuri

    This work is devoted to study of novel high power middle-infrared (Mid-IR) laser sources enabling development of portable platform for sensing of organic molecules with the use of recently discovered Quartz Enhanced Photo Acoustic Spectroscopy (QEPAS). The ability to detect small concentrations is beneficial to monitor atmosphere pollution as well for biomedical applications such as analysis of human breath to detect earlier stages of cancer or virus activities. A QEPAS technique using a quartz tuning fork (QTF) as a detector enables a strong enhancement of measured signal when pump laser is modulated with a frequency coinciding with a natural frequency of a QTF. It is known that the detectability of acousto-optics based sensors is proportional to the square root of the laser intensity used for detection of analyte. That is the reason why commercially available semiconductor Mid-IR lasers having small output power limit sensitivity of modern QEPAS based sensors. The lack of high power broadly tunable lasers operating with a modulation frequency of quartz forks (~ 32.768 kHz) is the major motivation of this study. Commercially available Mid-IR (2-3.3 microm), single frequency, continuous wave (CW) fiber pumped lasers based on transition metal doped chalcogenides (e.g. Cr:ZnSe) prove to be efficient laser sources for organic molecules detection. However, their direct modulation is limited to several kHz, and cannot be directly used in combination with QEPAS. Hence, one objective of this work is to study and develop fiber laser pumped Ho:YAG (Er:YAG)/Cr:ZnSe tandem laser system/s. Ho (Holmium) and/or Er (Erbium) ions having long radiation lifetime (~ 10 ms) can effectively accumulate population inversion under CW fiber laser excitation. Utilization of acousto-optic (AO) modulators in the cavity of Ho:YAG (Er:YAG) laser will enable effective Q-Switching with repetition rate easily reaching the resonance frequency of a QTF. It is expected that utilization of Ho:YAG (Er

  17. Feasibility Demonstration of Wide-Field Fourier-Spectroscopic-Imaging in Infrared Region

    NASA Astrophysics Data System (ADS)

    Qi, Wei; Takuma, Takashi; Tsutsumi, Ryosuke; Inui, Asuka; Kagiyama, Hiroyasu; Kojima, Daisuke; Nishiyama, Akira; Ishimaru, Ichirou

    We are aiming at the realization of living-environment sensor and non-invasive blood-sugar sensor by the proposed imaging type 2-D Fourier spectroscopy. This method is based on the phase-shift interference between the object beams. As a result, even if the object beams are spatially incoherent, we can observe the phase-shift interference phenomena. In the near infrared region, we can obtain the high-contrast blood vessel image of mouse's ear in the deeper part by InGaAs camera. Furthermore, in the mid-infrared region, we have successfully measured the radiation spectroscopic-imaging with wild field of view by the infrared module, such as the house plants.

  18. [Tri-Level Infrared Spectroscopic Identification of Hot Melting Reflective Road Marking Paint].

    PubMed

    Li, Hao; Ma, Fang; Sun, Su-qin

    2015-12-01

    In order to detect the road marking paint from the trace evidence in traffic accident scene, and to differentiate their brands, we use Tri-level infrared spectroscopic identification, which employs the Fourier transform infrared spectroscopy (FTIR), the second derivative infrared spectroscopy(SD-IR), two-dimensional correlation infrared spectroscopy(2D-IR) to identify three different domestic brands of hot melting reflective road marking paints and their raw materials in formula we Selected. The experimental results show that three labels coatings in ATR and FTIR spectrograms are very similar in shape, only have different absorption peak wave numbers, they have wide and strong absorption peaks near 1435 cm⁻¹, and strong absorption peak near 879, 2955, 2919, 2870 cm⁻¹. After enlarging the partial areas of spectrograms and comparing them with each kind of raw material of formula spectrograms, we can distinguish them. In the region 700-970 and 1370-1 660 cm⁻¹ the spectrograms mainly reflect the different relative content of heavy calcium carbonate of three brands of the paints, and that of polyethylene wax (PE wax), ethylene vinyl acetate resin (EVA), dioctyl phthalate (DOP) in the region 2800-2960 cm⁻¹. The SD-IR not only verify the result of the FTIR analysis, but also further expand the microcosmic differences and reflect the different relative content of quartz sand in the 512-799 cm-1 region. Within the scope of the 1351 to 1525 cm⁻¹, 2D-IR have more significant differences in positions and numbers of automatically peaks. Therefore, the Tri-level infrared spectroscopic identification is a fast and effective method to distinguish the hot melting road marking paints with a gradually improvement in apparent resolution.

  19. MASSIVE YOUNG STELLAR OBJECTS IN THE GALACTIC CENTER. I. SPECTROSCOPIC IDENTIFICATION FROM SPITZER INFRARED SPECTROGRAPH OBSERVATIONS

    SciTech Connect

    An, Deokkeun; RamIrez, Solange V.; Boogert, A. C. Adwin; Sellgren, Kris; Arendt, Richard G.; Schultheis, Mathias; Cotera, Angela S.; Stolovy, Susan R.

    2011-08-01

    We present results from our spectroscopic study, using the Infrared Spectrograph (IRS) on board the Spitzer Space Telescope, designed to identify massive young stellar objects (YSOs) in the Galactic center (GC). Our sample of 107 YSO candidates was selected based on Infrared Array Camera (IRAC) colors from the high spatial resolution, high sensitivity Spitzer/IRAC images in the Central Molecular Zone, which spans the central {approx}300 pc region of the Milky Way. We obtained IRS spectra over 5-35 {mu}m using both high- and low-resolution IRS modules. We spectroscopically identify massive YSOs by the presence of a 15.4 {mu}m shoulder on the absorption profile of 15 {mu}m CO{sub 2} ice, suggestive of CO{sub 2} ice mixed with CH{sub 3}OH ice on grains. This 15.4 {mu}m shoulder is clearly observed in 16 sources and possibly observed in an additional 19 sources. We show that nine massive YSOs also reveal molecular gas-phase absorption from CO{sub 2}, C{sub 2}H{sub 2}, and/or HCN, which traces warm and dense gas in YSOs. Our results provide the first spectroscopic census of the massive YSO population in the GC. We fit YSO models to the observed spectral energy distributions and find YSO masses of 8-23 M{sub sun}, which generally agree with the masses derived from observed radio continuum emission. We find that about 50% of photometrically identified YSOs are confirmed with our spectroscopic study. This implies a preliminary star formation rate of {approx}0.07 M{sub sun} yr{sup -1} at the GC.

  20. Heterogeneously integrated silicon photonics for the mid-infrared and spectroscopic sensing.

    PubMed

    Chen, Yu; Lin, Hongtao; Hu, Juejun; Li, Mo

    2014-07-22

    Besides being the foundational material for microelectronics, crystalline silicon has long been used for the production of infrared lenses and mirrors. More recently, silicon has become the key material to achieve large-scale integration of photonic devices for on-chip optical interconnect and signal processing. For optics, silicon has significant advantages: it offers a very high refractive index and is highly transparent in the spectral range from 1.2 to 8 μm. To fully exploit silicon’s superior performance in a remarkably broad range and to enable new optoelectronic functionalities, here we describe a general method to integrate silicon photonic devices on arbitrary foreign substrates. In particular, we apply the technique to integrate silicon microring resonators on mid-infrared compatible substrates for operation in the mid-infrared. These high-performance mid-infrared optical resonators are utilized to demonstrate, for the first time, on-chip cavity-enhanced mid-infrared spectroscopic analysis of organic chemicals with a limit of detection of less than 0.1 ng.

  1. Development of biosensor based on imaging ellipsometry and its applications

    NASA Astrophysics Data System (ADS)

    Jin, Gang

    2011-03-01

    We have reviewed the development of the biosensor based on imaging ellipsometry including its principle, methodology and general engineering model structure, mainly compared experimental setups between the previous one and the recently developed one. It's obvious that the sensitivity and the signal to noise ratio has been improved by a various spectroscopic light source, the optimization of polarized components setting and a cool CCD, especially the contribution of the CCD, which makes the biosensor available in more and more biomedical applications.

  2. Thermal Physical, and Infrared Spectroscopic Studies on Glasses Prepared by Microwave Route

    SciTech Connect

    Jagadeesha, N.; Gowda, V. C. Veeranna; Chakradhar, R. P. S.; Reddy, C. Narayana

    2011-07-15

    This paper describes thermal, physical and spectroscopic properties of glasses prepared by a novel micro wave method. These studies exhibited a strong compositional dependent trend and existence of characteristic boro-vanadate groups in these glasses. The scheme of modification of borate and vanadate groups is controlled by Sanderson's electronegativity principle. Analysis of density and glass transition temperatures suggests the presence of characteristic four coordinated borate and diboro - vanadate groups in these glasses. The presence of [BO{sub 4/2}]{sup -} and [B{sub 2}V{sub 2}O{sub 9}]{sup 2-}) groups are confirmed by Infrared Spectroscopy of investigated glasses.

  3. Infrared 3-4 um Spectroscopic Investigation of a Large Sample of Nearby Ultraluminous Infrared Galaxies

    DTIC Science & Technology

    2005-09-27

    servable with small air masses from Mauna Kea , Hawaii, our main observing site. These selection criteria result in 24 ULIRGs classified optically as... Observatory , 2-21-1, Osawa, Mitaka, Tokyo 181-8588, Japan; masa.imanishi@nao.ac.jp C. C. Dudley Naval Research Laboratory, Remote Sensing Division...data collected at Subaru Telescope, which is operated by the National Astronomical Observatory of Japan. 2 Visiting Astronomer at the Infrared Telescope

  4. Raman, infrared and near-infrared spectroscopic characterization of the herderite-hydroxylherderite mineral series

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; Scholz, Ricardo; López, Andrés; Xi, Yunfei; Queiroz, Camila de Siqueira; Belotti, Fernanda M.; Filho, Mauro Cândido

    2014-01-01

    Natural single-crystal specimens of the herderite-hydroxylherderite series from Brazil, with general formula CaBePO4(F,OH), were investigated by electron microprobe, Raman, infrared and near-infrared spectroscopies. The minerals occur as secondary products in granitic pegmatites. Herderite and hydroxylherderite minerals show extensive solid solution formation. The Raman spectra of hydroxylherderite are characterized by bands at around 985 and 998 cm-1, assigned to ν1 symmetric stretching mode of the HOPO33- and PO43- units. Raman bands at around 1085, 1128 and 1138 cm-1 are attributed to both the HOP and PO antisymmetric stretching vibrations. The set of Raman bands observed at 563, 568, 577, 598, 616 and 633 cm-1 are assigned to the ν4 out of plane bending modes of the PO4 and H2PO4 units. The OH Raman stretching vibrations of hydroxylherderite were observed ranging from 3626 cm-1 to 3609 cm-1. The infrared stretching vibrations of hydroxylherderites were observed between 3606 cm-1 and 3599 cm-1. By using a Libowitzky type function, hydrogen bond distances based upon the OH stretching bands were calculated. Characteristic NIR bands at around 6961 and 7054 cm-1 were assigned to the first overtone of the fundamental, whilst NIR bands at 10,194 and 10,329 cm-1 are assigned to the second overtone of the fundamental OH stretching vibration. Insight into the structure of the herderite-hydroxylherderite series is assessed by vibrational spectroscopy.

  5. Raman, infrared and near-infrared spectroscopic characterization of the herderite-hydroxylherderite mineral series.

    PubMed

    Frost, Ray L; Scholz, Ricardo; López, Andrés; Xi, Yunfei; Queiroz, Camila de Siqueira; Belotti, Fernanda M; Cândido Filho, Mauro

    2014-01-24

    Natural single-crystal specimens of the herderite-hydroxylherderite series from Brazil, with general formula CaBePO4(F,OH), were investigated by electron microprobe, Raman, infrared and near-infrared spectroscopies. The minerals occur as secondary products in granitic pegmatites. Herderite and hydroxylherderite minerals show extensive solid solution formation. The Raman spectra of hydroxylherderite are characterized by bands at around 985 and 998 cm(-1), assigned to ν1 symmetric stretching mode of the HOPO3(3-) and PO4(3-) units. Raman bands at around 1085, 1128 and 1138 cm(-1) are attributed to both the HOP and PO antisymmetric stretching vibrations. The set of Raman bands observed at 563, 568, 577, 598, 616 and 633 cm(-1) are assigned to the ν4 out of plane bending modes of the PO4 and H2PO4 units. The OH Raman stretching vibrations of hydroxylherderite were observed ranging from 3626 cm(-1) to 3609 cm(-1). The infrared stretching vibrations of hydroxylherderites were observed between 3606 cm(-1) and 3599 cm(-1). By using a Libowitzky type function, hydrogen bond distances based upon the OH stretching bands were calculated. Characteristic NIR bands at around 6961 and 7054 cm(-1) were assigned to the first overtone of the fundamental, whilst NIR bands at 10,194 and 10,329 cm(-1) are assigned to the second overtone of the fundamental OH stretching vibration. Insight into the structure of the herderite-hydroxylherderite series is assessed by vibrational spectroscopy.

  6. Infrared Spectroscopic Characteristics and Ionic Occupations in Crystalline Tunneling System of Yellow Beryl

    NASA Astrophysics Data System (ADS)

    Yu, Xiaoyan; Hu, Dingyu; Niu, Xiaowei; Kang, Weirui

    2017-02-01

    Infrared spectroscopic characteristics and ionic occupations in a crystalline tunneling system of yellow beryl crystals from Inner Mongolia, China, were investigated by standard gemological methods, laser ablation inductively coupled plasma mass spectrometry, x-ray diffraction, ultraviolet-visible (UV-Vis) spectrophotometry, and infrared (IR) spectroscopy in this study. The refractive index, specific gravity, and chemical composition of the samples are shown within the range of natural yellow beryls previously reported. The unit cell dimensions of the beryls are 9.208-9.212 Å for a and 9.105-9.206 Å for c with a ratio of c/a = 0.9985-0.9994. The beryl samples are generally alkali-poor beryls with Fe <0.05 and alkali <0.03 atoms per formula unit in the channel sites. The standard gemological test and mid-IR confirmed that these samples are natural beryl. However, polarized UV-Vis spectra showed an absorption band at 689 nm, and all polarized IR spectra of samples displayed a 7217-cm-1 infrared absorption in the studied samples which was associated with irradiation of the coloration. This treatment of color irradiation can be detected from the beryl channels with 689-nm absorption and 7217-cm-1 infrared absorption.

  7. Revision of Stellar Intrinsic Colors in the Infrared by Spectroscopic Surveys

    NASA Astrophysics Data System (ADS)

    Jian, Mingjie; Gao, Shuang; Zhao, He; Jiang, Biwei

    2017-01-01

    Intrinsic colors of normal stars are derived in the popularly used infrared bands involving the Two Micron All-Sky Survey/JHKS, Wide-field Infrared Survey Explorer, Spitzer/IRAC, and AKARI/S9W filters. Based on three spectroscopic surveys—LAMOST, RAVE, and APOGEE, stars are classified into groups of giants and dwarfs, as well as metal-normal and metal-poor stars. An empirical analytical relation of the intrinsic color is obtained with stellar effective temperature {T}{eff} for each group of stars after the zero-reddening stars are selected from the blue edge in the J-λ versus {T}{eff} diagram. It is found that metallicity has little effect on the infrared colors. In the near-infrared bands, our results agree with previous work. In addition, the color indexes H-W2 and {K}S-W1, which are taken as constant to calculate interstellar extinction, are discussed. The intrinsic colors of M-type stars are derived separately due to the lack of accurate measurement of their effective temperature.

  8. Characterization of porcine skin as a model for human skin studies using infrared spectroscopic imaging.

    PubMed

    Kong, Rong; Bhargava, Rohit

    2011-06-07

    Porcine skin is often considered a substitute for human skin based on morphological and functional data, for example, for transdermal drug diffusion studies. A chemical, structural and temporal characterization of porcine skin in comparison to human skin is not available but will likely improve our understanding of this porcine skin model. Here, we employ Fourier transform infrared (FT-IR) spectroscopic imaging to holistically measure chemical species as well as spatial structure as a function of time to characterize porcine skin as a model for human skin. Porcine skin was found to resemble human skin spectroscopically and differences are elucidated. Cryo-prepared fresh porcine skin samples for spectroscopic imaging were found to be stable over time and small variations are observed. Hence, we extended characterization to the use of this model for dynamic processes. In particular, the capacity and stability of this model in transdermal diffusion is examined. The results indicate that porcine skin is likely to be an attractive tool for studying diffusion dynamics of materials in human skin.

  9. Fourier transform Infrared spectroscopic characterization of mineralizing type I collagen enzymatic trivalent cross-links.

    PubMed

    Paschalis, E P; Gamsjaeger, S; Tatakis, D N; Hassler, N; Robins, S P; Klaushofer, K

    2015-01-01

    The most abundant protein of bone's organic matrix is collagen. One of its most important properties is its cross-linking pattern, which is responsible for the fibrillar matrices' mechanical properties such as tensile strength and viscoelasticity. We have previously described a spectroscopic method based on the resolution of the Amide I and II Fourier transform Infrared (FTIR) bands to their underlying constituent peaks, which allows the determination of divalent and pyridinoline (PYD) collagen cross-links in mineralized thin bone tissue sections with a spatial resolution of ~6.3 μm. In the present study, we used FTIR analysis of a series of biochemically characterized collagen peptides, as well as skin, dentin, and predentin, to examine the potential reasons underlying discrepancies between two different analytical methodologies specifically related to spectral processing. The results identified a novel distinct FTIR underlying peak at ~1,680 cm(-1), correlated with deoxypyridinoline (DPD) content. Furthermore, the two different methods of spectral resolution result in widely different results, while only the method employing well-established spectroscopic routines for spectral resolution provided biologically relevant results, confirming our earlier studies relating the area of the underlying 1,660 cm(-1) with PYD content. The results of the present study describe a new peak that may be used to determine DPD content, confirm our earlier report relating spectroscopic parameters to PYD content, and highlight the importance of the selected spectral resolution methodology.

  10. The Far Infrared Spectroscopic Explorer (FIRSPEX): probing the lifecycle of the ISM in the universe

    NASA Astrophysics Data System (ADS)

    Rigopoulou, D.; Caldwell, M.; Ellison, B.; Pearson, C.; Caux, E.; Cooray, A.; Gallego, J. D.; Gerin, M.; Goicoechea, J. R.; Goldsmith, P.; Kramer, C.; Lis, D. C.; Molinari, S.; Ossenkopf-Okada, V.; Savini, G.; Tan, B. K.; Tielens, X.; Viti, S.; Wiedner, M.; Yassin, G.

    2016-07-01

    The Far Infrared Spectroscopic Explorer (FIRSPEX) is a novel European-led astronomy mission concept developed to enable large area ultra high spectroscopic resolution surveys in the THz regime. FIRSPEX opens up a relatively unexplored spectral and spatial parameter space that will produce an enormously significant scientific legacy by focusing on the properties of the multi-phase ISM, the assembly of molecular clouds in our Galaxy and the onset of star formation; topics which are fundamental to our understanding of galaxy evolution. The mission uses a heterodyne instrument and a ~1.2 m primary antenna to scan large areas of the sky in a number of discreet spectroscopic channels from L2. The FIRSPEX bands centered at [CI] 809 GHz, [NII]1460 GHz, [CII]1900 GHz and [OI]4700 GHz have been carefully selected to target key atomic and ionic fine structure transitions difficult or impossible to access from the ground but fundamental to the study of the multi-phase ISM in the Universe. The need for state-of-the-art sensitivity dictates the use of superconducting mixers configured either as tunnel junctions or hot electron bolometers. This technology requires cooling to low temperatures, approaching 4K, in order to operate. The receivers will operate in double sideband configuration providing a total of 7 pixels on the sky. FIRSPEX will operate from L2 in both survey and pointed mode enabling velocity resolved spectroscopy of large areas of sky as well as targeted observations.

  11. GriF: an infrared 3D spectroscopic mode for KIR/PUEO

    NASA Astrophysics Data System (ADS)

    Clenet, Yann; Arsenault, Robin; Beuzit, Jean-Luc; Chalabaev, Almas; Delage, Claude; Joncas, Gilles; Lacombe, Francois; Lai, Olivier; Le Coarer, Etienne; Le Mignant, David; Pau, Sylvain; Rabou, Patrick; Rouan, Daniel

    2000-07-01

    When combined with Adaptive Optics, integral field spectroscopy, i.e. observation of a sky field simultaneously in a number of spectral passbands, is the most efficient way to perform spectro-imaging at high angular resolution. GriF will provide the CFHT community with such a capability in the near infrared K-band. This extension will be completed by means of two simple optical devices to be installed in the KIR cryostat (the infrared camera of PUEO): a cooled grism in the filter-wheel and a cold aperture on an entrance focal plane wheel. They will be completed by a room-temperature Fabry- Perot (FP) interferometer in front of KIR. The FP selects narrow bandpass images while the grism spatially separates them, giving a 3-D spectroscopic capacity within a compact and light design. At each exposure, several (up to 9) monochromatic images of a rectangular field of about 36 arcseconds X 4 arc-seconds will be simultaneously acquired, allowing a precise subtraction of continuum and background. The cooled grism will guarantee a low background environment, thus a good sensitivity at K. The medium spectral resolution (about 2600) will fit to a number of programs and will represent a considerable improvement on imaging with narrow- band filters. Thus, combining high angular resolution with the spectroscopic diagnosis, GriF will allow the study of a large class of compact objects or structures, especially in the extragalactic domain where its sensitivity should be unique.

  12. Spectroscopic Infrared Extinction Mapping as a Probe of Grain Growth in IRDCs

    NASA Astrophysics Data System (ADS)

    Lim, Wanggi; Carey, Sean J.; Tan, Jonathan C.

    2015-11-01

    We present spectroscopic tests of MIR to FIR extinction laws in IRDC G028.36+00.07, a potential site of massive star and star cluster formation. Lim & Tan developed methods of FIR extinction mapping of this source using Spitzer-MIPS 24 μm and Herschel-PACS 70 μm images, and by comparing to MIR Spitzer-IRAC 3-8 μm extinction maps, found tentative evidence for grain growth in the highest mass surface density regions. Here we present results of spectroscopic infrared extinction mapping using Spitzer-IRS (14-38 μm) data of the same Infrared dark cloud (IRDC). These methods allow us to first measure the SED of the diffuse Galactic interstellar medium that is in the foreground of the IRDC. We then carry out our primary investigation of measuring the MIR to FIR opacity law and searching for potential variations as a function of mass surface density within the IRDC. We find relatively flat, featureless MIR-FIR opacity laws that lack the ˜12 and ˜35 μm features associated with the thick water ice mantle models of Ossenkopf & Henning. Their thin ice mantle models and the coagulating aggregate dust models of Ormel et al. are a generally better match to the observed opacity laws. We also find evidence for generally flatter MIR to FIR extinction laws as mass surface density increases, strengthening the evidence for grain and ice mantle growth in higher density regions.

  13. Studies on Nephrite and Jadeite Jades by Fourier Transform Infrared (ftir) and Raman Spectroscopic Techniques

    NASA Astrophysics Data System (ADS)

    Tan, T. L.; Ng, L. L.; Lim, L. C.

    2013-10-01

    The mineralogical properties of black nephrite jade from Western Australia are studied by Fourier transform infrared (FTIR) spectroscopy using both transmission and specular reflectance techniques in the 4000-400 cm-1 wavenumber region. The infrared absorption peaks in the 3700-3600 cm-1 region which are due to the O-H stretching mode provides a quantitative analysis of the Fe/(Fe+Mg) ratio in the mineral composition of jade samples. The Fe/(Fe+Mg) percentage in black nephrite is found to be higher than that in green nephrite, but comparable to that of actinolite (iron-rich nephrite). This implies that the mineralogy of black nephrite is closer to actinolite than tremolite. The jade is also characterized using Raman spectroscopy in the 1200-200 cm-1 region. Results from FTIR and Raman spectroscopic data of black nephrite jade are compared with those of green nephrite jade from New Zealand and jadeite jade from Myanmar. Black nephrite appears to have a slightly different chemical composition from green nephrite. Spectra from FTIR and Raman spectroscopic techniques were found to be useful in differentiating black nephrite, green nephrite, and green jadeite jades. Furthermore, data on refractive index, specific gravity, and hardness of black nephrite jade are measured and compared with those of green nephrite and of jadeite jade.

  14. Skin hydration by spectroscopic imaging using multiple near-infrared bands

    NASA Astrophysics Data System (ADS)

    Attas, E. Michael; Sowa, Michael G.; Posthumus, Trevor B.; Schattka, Bernhard J.; Mantsch, Henry H.; Zhang, Shuliang L.

    2002-03-01

    Near-infrared spectroscopic methods have been developed to determine the degree of hydration of human skin in vivo. Reflectance spectroscopic imaging was used to investigate the distribution of skin moisture as a function of location. A human study in a clinical setting has generated quantitative data showing the effects of a drying agent and a moisturizer on delineated regions of the forearms of eight volunteers. Two digital imaging systems equipped with liquid-crystal tunable filters were used to collect stacks of monochromatic images at 10-nm intervals over the wavelength bands 650-1050 nm and 960-1700 nm. Images generated from measurements of water absorption-band areas at three different near-IR wavelengths (970, 1200, and 1450 nm) showed obvious differences in the apparent distribution of water in skin. Changes resulting from the skin treatments were much more evident in the 1200-nm and 1450-nm images than in the 970-nm ones. The variable sensitivity of the method at different wavelengths has been interpreted as being the result of different penetration depths of the infrared light used in the reflectance studies. Ex-vivo experiments with pigskin have provided evidence supporting the relationship between wavelength and penetration depth. Combining the hydration results from several near-IR water bands allows additional information on hydration depth to be obtained.

  15. SPECTROSCOPIC INFRARED EXTINCTION MAPPING AS A PROBE OF GRAIN GROWTH IN IRDCs

    SciTech Connect

    Lim, Wanggi; Carey, Sean J.; Tan, Jonathan C.

    2015-11-20

    We present spectroscopic tests of MIR to FIR extinction laws in IRDC G028.36+00.07, a potential site of massive star and star cluster formation. Lim and Tan developed methods of FIR extinction mapping of this source using Spitzer-MIPS 24 μm and Herschel-PACS 70 μm images, and by comparing to MIR Spitzer-IRAC 3–8 μm extinction maps, found tentative evidence for grain growth in the highest mass surface density regions. Here we present results of spectroscopic infrared extinction mapping using Spitzer-IRS (14–38 μm) data of the same Infrared dark cloud (IRDC). These methods allow us to first measure the SED of the diffuse Galactic interstellar medium that is in the foreground of the IRDC. We then carry out our primary investigation of measuring the MIR to FIR opacity law and searching for potential variations as a function of mass surface density within the IRDC. We find relatively flat, featureless MIR–FIR opacity laws that lack the ∼12 and ∼35 μm features associated with the thick water ice mantle models of Ossenkopf and Henning. Their thin ice mantle models and the coagulating aggregate dust models of Ormel et al. are a generally better match to the observed opacity laws. We also find evidence for generally flatter MIR to FIR extinction laws as mass surface density increases, strengthening the evidence for grain and ice mantle growth in higher density regions.

  16. FRIENDS OF HOT JUPITERS. III. AN INFRARED SPECTROSCOPIC SEARCH FOR LOW-MASS STELLAR COMPANIONS

    SciTech Connect

    Piskorz, Danielle; Knutson, Heather A.; Ngo, Henry; Batygin, Konstantin; Muirhead, Philip S.; Crepp, Justin R.; Hinkley, Sasha; Morton, Timothy D.

    2015-12-01

    Surveys of nearby field stars indicate that stellar binaries are common, yet little is known about the effects that these companions may have on planet formation and evolution. The Friends of Hot Jupiters project uses three complementary techniques to search for stellar companions to known planet-hosting stars: radial velocity monitoring, adaptive optics imaging, and near-infrared spectroscopy. In this paper, we examine high-resolution K band infrared spectra of fifty stars hosting gas giant planets on short-period orbits. We use spectral fitting to search for blended lines due to the presence of cool stellar companions in the spectra of our target stars, where we are sensitive to companions with temperatures between 3500 and 5000 K and projected separations less than 100 AU in most systems. We identify eight systems with candidate low-mass companions, including one companion that was independently detected in our AO imaging survey. For systems with radial velocity accelerations, a spectroscopic non-detection rules out scenarios involving a stellar companion in a high inclination orbit. We use these data to place an upper limit on the stellar binary fraction at small projected separations, and show that the observed population of candidate companions is consistent with that of field stars and also with the population of wide-separation companions detected in our previous AO survey. We find no evidence that spectroscopic stellar companions are preferentially located in systems with short-period gas giant planets on eccentric and/or misaligned orbits.

  17. Coupled blind signal separation and spectroscopic database fitting of the mid infrared PAH features

    NASA Astrophysics Data System (ADS)

    Rosenberg, M. J. F.; Berné, O.; Boersma, C.; Allamandola, L. J.; Tielens, A. G. G. M.

    2011-08-01

    Context. The aromatic infrared bands (AIBs) observed in the mid infrared spectrum of galactic and extragalactic sources are attributed to polycyclic aromatic hydrocarbons (PAHs). Recently, two new approaches have been developed to analyze the variations of AIBs in terms of chemical evolution of PAH species: blind signal separation (BSS) and the NASA Ames PAH IR Spectroscopic Database fitting tool. Aims: We aim to study AIBs in a photo-dissociation region (PDR) since in these regions, as the radiation environment changes, the evolution of AIBs are observed. Methods: We observe the NGC 7023-north west (NW) PDR in the mid-infrared (10-19.5 μm) using the InfraRed Spectrometer (IRS), on board Spitzer, in the high-resolution, short wavelength mode. Clear variations are observed in the spectra, most notably the ratio of the 11.0 to 11.2 μm bands, the peak position of the 11.2 and 12.0 μm bands, and the degree of asymmetry of the 11.2 μm band. The observed variations appear to change as a function of position within the PDR. We aim to explain these variations by a change in the abundances of the emitting components of the PDR. A blind signal separation (BSS) method, i.e. a Non-Negative Matrix Factorization algorithm is applied to separate the observed spectrum into components. Using the NASA Ames PAH IR Spectroscopic Database, these extracted signals are fit. The observed signals alone were also fit using the database and these components are compared to the BSS components. Results: Three component signals were extracted from the observation using BSS. We attribute the three signals to ionized PAHs, neutral PAHs, and very small grains (VSGs). The fit of the BSS extracted spectra with the PAH database further confirms the attribution to PAH+ and PAH0 and provides confidence in both methods for producing reliable results. Conclusions: The 11.0 μm feature is attributed to PAH+ while the 11.2 μm band is attributed to PAH0. The VSG signal shows a characteristically

  18. A far-infrared spectroscopic survey of intermediate redshift (ultra) luminous infrared galaxies

    SciTech Connect

    Magdis, Georgios E.; Rigopoulou, D.; Hopwood, R.; Clements, D.; Huang, J.-S.; Farrah, D.; Pearson, C.; Alonso-Herrero, Almudena; Bock, J. J.; Cooray, A.; Griffin, M. J.; Oliver, S.; Perez Fournon, I.; Riechers, D.; Swinyard, B. M.; Thatte, N.; Scott, D.; Valtchanov, I.; Vaccari, M.

    2014-11-20

    We present Herschel far-IR photometry and spectroscopy as well as ground-based CO observations of an intermediate redshift (0.21 ≤ z ≤ 0.88) sample of Herschel-selected (ultra)-luminous infrared galaxies (L {sub IR} > 10{sup 11.5} L {sub ☉}). With these measurements, we trace the dust continuum, far-IR atomic line emission, in particular [C II] 157.7 μm, as well as the molecular gas of z ∼ 0.3 luminous and ultraluminous infrared galaxies (LIRGs and ULIRGs) and perform a detailed investigation of the interstellar medium of the population. We find that the majority of Herschel-selected intermediate redshift (U)LIRGs have L {sub C} {sub II}/L {sub FIR} ratios that are a factor of about 10 higher than that of local ULIRGs and comparable to that of local normal and high-z star-forming galaxies. Using our sample to bridge local and high-z [C II] observations, we find that the majority of galaxies at all redshifts and all luminosities follow an L {sub C} {sub II}–L {sub FIR} relation with a slope of unity, from which local ULIRGs and high- z active-galactic-nucleus-dominated sources are clear outliers. We also confirm that the strong anti-correlation between the L {sub C} {sub II}/L {sub FIR} ratio and the far-IR color L {sub 60}/L {sub 100} observed in the local universe holds over a broad range of redshifts and luminosities, in the sense that warmer sources exhibit lower L {sub C} {sub II}/L {sub FIR} at any epoch. Intermediate redshift ULIRGs are also characterized by large molecular gas reservoirs and by lower star formation efficiencies compared to that of local ULIRGs. The high L {sub C} {sub II}/L {sub FIR} ratios, the moderate star formation efficiencies (L {sub IR}/L{sub CO}{sup ′} or L {sub IR}/M{sub H{sub 2}}), and the relatively low dust temperatures of our sample (which are also common characteristics of high-z star-forming galaxies with ULIRG-like luminosities) indicate that the evolution of the physical properties of (U)LIRGs between the

  19. Fourier Transform Infrared Spectroscopic Studies Of Wheat In The Mid Infrared

    NASA Astrophysics Data System (ADS)

    Olinger, Jill M.; Griffiths, Peter R.

    1989-12-01

    Official grain standards of the United States state that wheat may be divided into seven classes which are: Durum, Red Durum, Hard Red Spring, Hard Red Winter, Soft Red Winter, White, and Mixed.1 Most end uses of wheat involve converting the grain into flour through one of a variety of grinding methods. The quality of wheat-based products is often very dependent upon the type or class of wheat which was used to make the flour. Pasta products, for example, are made almost exclusively from the flour of durum wheats, which are the hardest of the wheats listed above. The highest quality breads are produced using flour from wheats classed as hard, whereas cakes, cookies and pastries are considered best when flour from wheats classed as soft are used. It is obvious then that the capability of determining the class of a particular wheat, especially with respect to hardness, is of economic importance to growers, processors, and merchants of wheat and wheat products. Hardness has been measured in many different ways 2-5 but, as of yet, no one method has become the method of choice. This paper reports on the use of principal components analysis (PCA) of mid infrared diffuse reflectance (DR) spectra of diluted ground wheats to aid in the classification of those wheats with respect to their hardness. The theory and mathematics involved in a principal component analysis have been described elsewhere.9

  20. Recognizing brain activities by functional near-infrared spectroscope signal analysis

    PubMed Central

    Khoa, Truong Quang Dang; Nakagawa, Masahiro

    2008-01-01

    Background Functional Near-Infrared Spectroscope (fNIRs) is one of the latest technologies which utilize light in the near-infrared range to determine brain activities. Near-infrared technology allows design of safe, portable, wearable, non-invasive and wireless qualities monitoring systems. This indicates that fNIRs signal monitoring of brain hemodynamics can be value in helping to understand brain tasks. In this paper, we present results of fNIRs signal analysis to show that there exist distinct patterns of hemodynamic responses which recognize brain tasks toward developing a Brain-Computer interface. Results We applied Higuchi's fractal dimension algorithms to analyse irregular and complex characteristics of fNIRs signals, and then Wavelets transform is used to analysis for preprocessing as signal filters and feature extractions and Neural networks is a module for cognition brain tasks. Conclusion Throughout two experiments, we have demonstrated the feasibility of fNIRs analysis to recognize human brain activities. PMID:18590571

  1. Infrared spectroscopic analysis of skin tumor of mice treated with several medicinal plants

    PubMed Central

    Ali, Huma; Dixit, Savita

    2013-01-01

    Objective To evaluate the differences between cancerous tissue, drug treated tissue and its corresponding normal tissue by infrared spectroscopic analysis. Methods Methanolic extracts of Azadirachta indica, Ocimum sanctum, Aloe barbandesis, Tinospora cordifolia and Triticum aestivum were assessed for the isolation and purification of active compound. After that, combine crude and combine isolated samples were prepared. Skin tumor was induced by topical application of 7, 12-dimethyl benz (a) anthracene and promoted by croton oil in Swiss albino mice. To assess the chemopreventive potential of different drugs, it was administered at a concentration of 400 mg/kg body weight daily up to 16 weeks. Fourier transform infrared spectroscopy analysis was used to differentiate the drug treated tissues with the normal and cancerous tissue. In the present study, spectra of different tissues were recorded in the range of 400-4 000 cm−1. Results The results of the present study have shown that the remarkable difference exists between the IR spectra of normal, drugs treated and cancerous tissue in terms of frequencies and intensities of prominent bands of cellular biomolecules. Conclusions Fourier transform infrared spectroscopy analysis suggests the chemopreventive effect of above treated drugs and the best result was observed in combine crude sample and in combine isolated sample or synergistic effect of individual crude and isolated extract in 7, 12-dimethyl benz (a) anthracene croton oil induced skin carcinogenesis in Swiss albino mice.

  2. Simulation and Optimization of Synchrotron Infrared Micro-Spectroscopic Beamlines using Wave Optics Computation: ESRF and SOLEIL's Cases

    SciTech Connect

    Chubar, O.; Polack, F.; Lagarde, B.; Dumas, P.; Susini, J.; Cotte, M.; Scheidt, K.; Elleaume, P.

    2007-01-19

    Applications of the 'Synchrotron Radiation Workshop' (SRW) computer code to the design and optimization of the mid-infrared micro-spectroscopic beamlines at the ESRF and SOLEIL storage ring are described. The agreement found between SRW simulation, at various positions from the source to the spectrometer, ray tracing calculations and intensity profile measurements demonstrates that SRW is readily an excellent approach to optimize any synchrotron infrared beamline.

  3. Near-infrared spectroscopic determination of degradation in vegetable oils used to fry various foods.

    PubMed

    Ng, Choo Lum; Wehling, Randy L; Cuppett, Susan L

    2011-12-14

    Near-infrared (NIR) spectroscopic methods for measuring degradation products, including total polar materials (TPMs) and free fatty acids (FFAs), in soy-based frying oil used for frying various foods have been successfully developed. Calibration models were developed using forward stepwise multiple linear regression (FSMLR) and partial least-squares (PLS) regression techniques and then tested with an independent set of validation samples. The results show that the quality of oil used for frying different foods can be measured with a single model. First-derivative treatments improved results for TPM measurement. In addition, PLS models gave better prediction results than FSMLR models. For PLS models, the best correlations (r) between the NIR-predicted data and the chemical method data for TPMs and FFAs in oils were 0.995 and 0.981, respectively. For FSMLR models, the best r values for TPMs and FFAs in oils were 0.993 and 0.963, respectively.

  4. Pectin functionalised by fatty acids: Diffuse reflectance infrared Fourier transform (DRIFT) spectroscopic characterisation

    NASA Astrophysics Data System (ADS)

    Kamnev, Alexander A.; Calce, Enrica; Tarantilis, Petros A.; Tugarova, Anna V.; De Luca, Stefania

    2015-01-01

    Chemically modified pectin derivatives obtained by partial esterification of its hydroxyl moieties with fatty acids (FA; oleic, linoleic and palmitic acids), as well as the initial apple peel pectin were comparatively characterised using diffuse reflectance infrared Fourier transform (DRIFT) spectroscopy. Characteristic changes observed in DRIFT spectra in going from pectin to its FA esters are related to the corresponding chemical modifications. Comparing the DRIFT spectra with some reported data on FTIR spectra of the same materials measured in KBr or NaCl matrices has revealed noticeable shifts of several polar functional groups both in pectin and in its FA-esterified products induced by the halide salts. The results obtained have implications for careful structural analyses of biopolymers with hydrophilic functional groups by means of different FTIR spectroscopic methodologies.

  5. High-definition Fourier transform infrared spectroscopic imaging of prostate tissue

    NASA Astrophysics Data System (ADS)

    Wrobel, Tomasz P.; Kwak, Jin Tae; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2016-03-01

    Histopathology forms the gold standard for cancer diagnosis and therapy, and generally relies on manual examination of microscopic structural morphology within tissue. Fourier-Transform Infrared (FT-IR) imaging is an emerging vibrational spectroscopic imaging technique, especially in a High-Definition (HD) format, that provides the spatial specificity of microscopy at magnifications used in diagnostic surgical pathology. While it has been shown for standard imaging that IR absorption by tissue creates a strong signal where the spectrum at each pixel is a quantitative "fingerprint" of the molecular composition of the sample, here we show that this fingerprint also enables direct digital pathology without the need for stains or dyes for HD imaging. An assessment of the potential of HD imaging to improve diagnostic pathology accuracy is presented.

  6. SEM, EDX, infrared and Raman spectroscopic characterization of the silicate mineral yuksporite.

    PubMed

    Frost, Ray L; López, Andrés; Scholz, Ricardo; Theiss, Frederick L; Romano, Antônio Wilson

    2015-02-25

    The mineral yuksporite (K,Ba)NaCa2(Si,Ti)4O11(F,OH)⋅H2O has been studied using the combination of SEM with EDX and vibrational spectroscopic techniques of Raman and infrared spectroscopy. Scanning electron microscopy shows a single pure phase with cleavage fragment up to 1.0 mm. Chemical analysis gave Si, Al, K, Na and Ti as the as major elements with small amounts of Mn, Ca, Fe and REE. Raman bands are observed at 808, 871, 930, 954, 980 and 1087 cm(-1) and are typical bands for a natural zeolite. Intense Raman bands are observed at 514, 643 and 668 cm(-1). A very sharp band is observed at 3668 cm(-1) and is attributed to the OH stretching vibration of OH units associated with Si and Ti. Raman bands resolved at 3298, 3460, 3562 and 3628 cm(-1) are assigned to water stretching vibrations.

  7. Infrared Spectroscopic Study of Vibrational Modes in Methylammonium Lead Halide Perovskites.

    PubMed

    Glaser, Tobias; Müller, Christian; Sendner, Michael; Krekeler, Christian; Semonin, Octavi E; Hull, Trevor D; Yaffe, Omer; Owen, Jonathan S; Kowalsky, Wolfgang; Pucci, Annemarie; Lovrinčić, Robert

    2015-08-06

    The organic cation and its interplay with the inorganic lattice underlie the exceptional optoelectronic properties of organo-metallic halide perovskites. Herein we report high-quality infrared spectroscopic measurements of methylammonium lead halide perovskite (CH3NH3Pb(I/Br/Cl)3) films and single crystals at room temperature, from which the dielectric function in the investigated spectral range is derived. Comparison with electronic structure calculations in vacuum of the free methylammonium cation allows for a detailed peak assignment. We analyze the shifts of the vibrational peak positions between the different halides and infer the extent of interaction between organic moiety and the surrounding inorganic cage. The positions of the NH3(+) stretching vibrations point to significant hydrogen bonding between the methylammonium and the halides for all three perovskites.

  8. SEM, EDX, Infrared and Raman spectroscopic characterization of the silicate mineral yuksporite

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo; Theiss, Frederick L.; Romano, Antônio Wilson

    2015-02-01

    The mineral yuksporite (K,Ba)NaCa2(Si,Ti)4O11(F,OH)ṡH2O has been studied using the combination of SEM with EDX and vibrational spectroscopic techniques of Raman and infrared spectroscopy. Scanning electron microscopy shows a single pure phase with cleavage fragment up to 1.0 mm. Chemical analysis gave Si, Al, K, Na and Ti as the as major elements with small amounts of Mn, Ca, Fe and REE. Raman bands are observed at 808, 871, 930, 954, 980 and 1087 cm-1 and are typical bands for a natural zeolite. Intense Raman bands are observed at 514, 643 and 668 cm-1. A very sharp band is observed at 3668 cm-1 and is attributed to the OH stretching vibration of OH units associated with Si and Ti. Raman bands resolved at 3298, 3460, 3562 and 3628 cm-1 are assigned to water stretching vibrations.

  9. THE NASA AMES POLYCYCLIC AROMATIC HYDROCARBON INFRARED SPECTROSCOPIC DATABASE: THE COMPUTED SPECTRA

    SciTech Connect

    Bauschlicher, C. W.; Ricca, A.; Boersma, C.; Mattioda, A. L.; Cami, J.; Peeters, E.; Allamandola, L. J.; Sanchez de Armas, F.; Puerta Saborido, G.; Hudgins, D. M.

    2010-08-15

    The astronomical emission features, formerly known as the unidentified infrared bands, are now commonly ascribed to polycyclic aromatic hydrocarbons (PAHs). The laboratory experiments and computational modeling done at the NASA Ames Research Center to create a collection of PAH IR spectra relevant to test and refine the PAH hypothesis have been assembled into a spectroscopic database. This database now contains over 800 PAH spectra spanning 2-2000 {mu}m (5000-5 cm{sup -1}). These data are now available on the World Wide Web at www.astrochem.org/pahdb. This paper presents an overview of the computational spectra in the database and the tools developed to analyze and interpret astronomical spectra using the database. A description of the online and offline user tools available on the Web site is also presented.

  10. Mercury And The Moon: Mid-infrared Spectroscopic Measurements Of The Surface

    NASA Astrophysics Data System (ADS)

    Donaldson Hanna, Kerri L.; Sprague, A. L.; Kozlowski, R. W.; Boccafolo, K.; Helbert, J.; Maturilli, A.; Warell, J.

    2006-09-01

    Spectroscopic observations (7.5 - 13 μm) of Mercury and the Moon obtained with MIRSI (Mid-Infrared Spectrometer and Imager) at the NASA Infrared Telescope Facility (IRTF) are presented. The spectra were acquired at mercurian W. longitudes 172 - 282° covering north polar to south polar latitudes. Also acquired were lunar surface measurements of the Apollo 16 landing site and Grimaldi basin and highlands. Mercury measurements covered Caloris Basin, Basin S, and other regions on the side not imaged by Mariner 10. Lunar locations were chosen for their known surface compositions determined from near-infrared spectral telescopic observations and Apollo return samples. Spectra for both bodies were reduced with the same calibration star to minimize reduction differences. Spectral differences between the mercurian locations indicate a heterogeneous composition and differences between Mercury and lunar spectra indicate compositional differences between the two bodies. All collected spectra from Mercury and the Moon show distinct and recognizable features including the Christiansen emissivity maximum and one or more transmission minima. Other features have yet to be identified. True emission spectra of rock and mineral powders with varying grain sizes will be presented for comparison with the data. Acknowledgements: The authors of this paper were Visiting Astronomers at the Infrared Telescope Facility, which is operated by the University of Hawaii under Cooperative Agreement no. NCC 5-538 with the National Aeronautics and Space Administration, Science Mission Directorate, Planetary Astronomy Program. We are especially grateful to Alan Tokunaga and Eric Tollestrup for useful engineering time on the telescope and Don Hunten for helpful discussions. This work was supported by NSF grant AST-0406796.

  11. Development of an ultrahigh-performance infrared detector platform for advanced spectroscopic sensing systems

    NASA Astrophysics Data System (ADS)

    Jain, Manish; Wicks, Gary; Marshall, Andrew; Craig, Adam; Golding, Terry; Hossain, Khalid; McEwan, Ken; Howle, Chris

    2014-05-01

    Laser-based stand-off sensing of threat agents (e.g. explosives, toxic industrial chemicals or chemical warfare agents), by detection of distinct infrared spectral absorption signature of these materials, has made significant advances recently. This is due in part to the availability of infrared and terahertz laser sources with significantly improved power and tunability. However, there is a pressing need for a versatile, high performance infrared sensor that can complement and enhance the recent advances achieved in laser technology. This work presents new, high performance infrared detectors based on III-V barrier diodes. Unipolar barrier diodes, such as the nBn, have been very successful in the MWIR using InAs(Sb)-based materials, and in the MWIR and LWIR using type-II InAsSb/InAs superlattice-based materials. This work addresses the extension of the barrier diode architecture into the SWIR region, using GaSb-based and InAs-based materials. The program has resulted in detectors with unmatched performance in the 2-3 μm spectral range. Temperature dependent characterization has shown dark currents to be diffusion limited and equal to, or within a factor of 5, of the Rule 07 expression for Auger-limited HgCdTe detectors. Furthermore, D* values are superior to those of existing detectors in the 2-3 μm band. Of particular significance to spectroscopic sensing systems is the ability to have near-background limited performance at operation temperatures compatible with robust and reliable solid state thermoelectric coolers.

  12. DISCOVERY OF THREE DISTANT, COLD BROWN DWARFS IN THE WFC3 INFRARED SPECTROSCOPIC PARALLELS SURVEY

    SciTech Connect

    Masters, D.; Siana, B.; McCarthy, P.; Hathi, N. P.; Dressler, A.; Burgasser, A. J.; Malkan, M.; Ross, N. R.; Scarlata, C.; Henry, A.; Colbert, J.; Atek, H.; Rafelski, M.; Teplitz, H.; Bunker, A.

    2012-06-10

    We present the discovery of three late-type ({>=}T4.5) brown dwarfs, including a probable Y dwarf, in the WFC3 Infrared Spectroscopic Parallels (WISP) survey. We use the G141 grism spectra to determine the spectral types of the dwarfs and derive distance estimates based on a comparison with nearby T dwarfs with known parallaxes. These are the most distant spectroscopically confirmed T/Y dwarfs, with the farthest at an estimated distance of {approx}400 pc. We compare the number of cold dwarfs found in the WISP survey with simulations of the brown dwarf mass function. The number found is generally consistent with an initial stellar mass function dN/dM{proportional_to}M{sup -{alpha}} with {alpha} = 0.0-0.5, although the identification of a Y dwarf is somewhat surprising and may be indicative of either a flatter absolute magnitude/spectral-type relation than previously reported or an upturn in the number of very-late-type brown dwarfs in the observed volume.

  13. Electronic Time-Gated and Spectroscopic Near-Infrared Imaging of Lesions in Human Tissues*

    NASA Astrophysics Data System (ADS)

    Gayen, S. K.; Alrubaiee, M.; Alfano, R. R.; Koutcher, J.; Savage, H.

    2000-03-01

    Near-infrared (NIR) transillumination imaging is used to investigate normal and cancerous tissues of human breast, thyroid, and parotid gland. The time-sliced imaging arrangement uses 130-fs, 1 kHz repetition-rate, 800 nm pulses from a Ti:sapphire laser and amplifier system for sample illumination and a CCD camera coupled to a gated image intensifier for recording two-dimensional (2D) images. Images recorded with earlier temporal slices of transmitted light highlight cancerous tissues while those recorded with later slices accentuate normal fibrous tissues. The spectroscopic imaging arrangement uses 1210-1300 nm tunable output of a Cr:forsterite laser for sample illumination, a Fourier space gate to discriminate against multiple-scattered light, and a NIR area camera to record 2D images. When light is tuned to a known absorption resonance of a particular tissue type, a marked enhancement in image contrast is observed which is indicative of the diagnostic potential of spectroscopic imaging.

  14. Infrared spectroscopic characterization of monocytic microvesicles (microparticles) released upon lipopolysaccharide stimulation.

    PubMed

    Lee, Joonsup; Wen, Beryl; Carter, Elizabeth A; Combes, Valery; Grau, Georges E R; Lay, Peter A

    2017-03-17

    Microvesicles (MVs) are involved in cell-cell interactions, including disease pathogenesis. Nondestructive Fourier-transform infrared (FTIR) spectra from MVs were assessed as a technique to provide new biochemical insights into a LPS-induced monocyte model of septic shock. FTIR spectroscopy provided a quick method to investigate relative differences in biomolecular content of different MV populations that was complementary to traditional semiquantitative omics approaches, with which it is difficult to provide information on relative changes between classes (proteins, lipids, nucleic acids, carbohydrates) or protein conformations. Time-dependent changes were detected in biomolecular contents of MVs and in the monocytes from which they were released. Differences in phosphatidylcholine and phosphatidylserine contents were observed in MVs released under stimulation, and higher relative concentrations of RNA and α-helical structured proteins were present in stimulated MVs compared with MVs from resting cells. FTIR spectra of stimulated monocytes displayed changes that were consistent with those observed in the corresponding MVs they released. LPS-stimulated monocytes had reduced concentrations of nucleic acids, α-helical structured proteins, and phosphatidylcholine compared with resting monocytes but had an increase in total lipids. FTIR spectra of MV biomolecular content will be important in shedding new light on the mechanisms of MVs and the different roles they play in physiology and disease pathogenesis.-Lee, J., Wen, B., Carter, E. A., Combes, V., Grau, G. E. R., Lay. P. A. Infrared spectroscopic characterization of monocytic microvesicles (microparticles) released upon lipopolysaccharide stimulation.

  15. Near infrared spectroscopic calibration models for real time monitoring of powder density.

    PubMed

    Román-Ospino, Andrés D; Singh, Ravendra; Ierapetritou, Marianthi; Ramachandran, Rohit; Méndez, Rafael; Ortega-Zuñiga, Carlos; Muzzio, Fernando J; Romañach, Rodolfo J

    2016-10-15

    Near infrared spectroscopic (NIRS) calibration models for real time prediction of powder density (tap, bulk and consolidated) were developed for a pharmaceutical formulation. Powder density is a critical property in the manufacturing of solid oral dosages, related to critical quality attributes such as tablet mass, hardness and dissolution. The establishment of calibration techniques for powder density is highly desired towards the development of control strategies. Three techniques were evaluated to obtain the required variation in powder density for calibration sets: 1) different tap density levels (for a single component), 2) generating different strain levels in powders blends (and as consequence powder density), through a modified shear Couette Cell, and 3) applying normal forces during a compressibility test with a powder rheometer to a pharmaceutical blend. For each variation in powder density, near infrared spectra were acquired to develop partial least squares (PLS) calibration models. Test samples were predicted with a relative standard error of prediction of 0.38%, 7.65% and 0.93% for tap density (single component), shear and rheometer respectively. Spectra obtained in real time in a continuous manufacturing (CM) plant were compared to the spectra from the three approaches used to vary powder density. The calibration based on the application of different strain levels showed the greatest similarity with the blends produced in the CM plant.

  16. An in situ infrared spectroscopic investigation of the pyrolysis of ethylene glycol encapsulated in silica sodalite.

    SciTech Connect

    Maroni, V. A.; Epperson, S. J.; Chemical Engineering; Univ. of Tulsa

    2001-11-29

    The thermal stability and pyrolysis of ethylene glycol (EG) encapsulated in the sodalite cages of all-silica sodalite were studied by diffuse reflectance infrared Fourier transform (DRIFT) spectroscopy and transmission infrared spectroscopy. Evidence for the presence of encapsulated CO2 formed as a result of partial decomposition of EG molecules was observed starting at about 600 K. Complete, irreversible pyrolysis of the EG occurred between 675 and 775 K. After treatment at 775 K, the CO2 remained encapsulated in the sodalite framework, even though there were spectroscopic indications that the pyrolysis caused a disordering of the sodalite framework. There appeared to be a temperature dependence of the conformational interactions of the EG O---H groups up to 600 K, which was mainly manifested as a weakening of intramolecular hydrogen bonding. The only detectable encapsulated products of the EG decomposition in an inert (N2 or Ar) environment were CO2 and a carbonaceous (coke- or soot-like) residue. There was no evidence of other encapsulated products, such as CO, H2, H2O, or light hydrocarbons.

  17. A near-infrared high-resolution spectroscopic survey of Galactic bulge stars . - JASMINE prestudy -

    NASA Astrophysics Data System (ADS)

    Tsujimoto, T.; Kobayashi, N.; Ikeda, Y.; Kondo, S.; Yasui, C.; Minami, A.; Motohara, K.; Gouda, N.

    We are developing a new near-infrared high-resolution (R_max= 100,000) and high-sensitive spectrograph WINERED, which is specifically customized for short NIR bands at 0.9-1.35 mu m. WINERED employs the novelty in the optical system; a portable design with a near-infrared immersion grating and warm optics without any cold stops. The planned astrometric space mission JASMINE will provide the exact positions, distances, and proper motions of the Galactic bulge stars. The missing components, the radial velocity and chemical compositions, will be measured by WINERED with high accuracies (delta V< 10km/s). These combined data brought by JASMINE and WINERED will certainly reveal the nature of the Galactic bulge. We plan to complete this instrument with a single slit by the end of 2008 and hope to attach it to various 4-10 m telescopes as a PI-type instrument. In succession, we plan to develop a similar spectrograph but with a simultaneous multi-object spectroscopic capability for full-fledged bulge survey.

  18. Mid-infrared Spectroscopic Observations of the Dust-forming Classical Nova V2676 Oph

    NASA Astrophysics Data System (ADS)

    Kawakita, Hideyo; Ootsubo, Takafumi; Arai, Akira; Shinnaka, Yoshiharu; Nagashima, Masayoshi

    2017-02-01

    The dust-forming nova V2676 Oph is unique in that it was the first nova to provide evidence of C2 and CN molecules during its near-maximum phase and evidence of CO molecules during its early decline phase. Observations of this nova have revealed the slow evolution of its lightcurves and have also shown low isotopic ratios of carbon (12C/13C) and nitrogen (14N/15N) in its envelope. These behaviors indicate that the white dwarf (WD) star hosting V2676 Oph is a CO-rich WD rather than an ONe-rich WD (typically larger in mass than the former). We performed mid-infrared spectroscopic and photometric observations of V2676 Oph in 2013 and 2014 (respectively 452 and 782 days after its discovery). No significant [Ne ii] emission at 12.8 μm was detected at either epoch. These provided evidence for a CO-rich WD star hosting V2676 Oph. Both carbon-rich and oxygen-rich grains were detected in addition to an unidentified infrared feature at 11.4 μm originating from polycyclic aromatic hydrocarbon molecules or hydrogenated amorphous carbon grains in the envelope of V2676 Oph. Based on data collected at the Subaru Telescope, which is operated by the National Astronomical Observatory of Japan.

  19. Spectroscopic Study of Terahertz Generation in Mid-Infrared Quantum Cascade Lasers

    PubMed Central

    Jiang, Yifan; Vijayraghavan, Karun; Jung, Seungyong; Jiang, Aiting; Kim, Jae Hyun; Demmerle, Frederic; Boehm, Gerhard; Amann, Markus C.; Belkin, Mikhail A.

    2016-01-01

    Terahertz quantum cascade laser sources based on intra-cavity difference-frequency generation are currently the only room-temperature mass-producible diode-laser-like emitters of coherent 1–6 THz radiation. Device performance has improved dramatically over the past few years to reach milliwatt-level power output and broad tuning from 1.2 to 5.9 THz, all at room-temperature. Terahertz output in these sources originates from intersubband optical nonlinearity in the laser active region. Here we report the first comprehensive spectroscopic study of the optical nonlinearity and investigate its dependence on the mid-infrared pump frequencies. Our work shows that the terahertz generation efficiency can vary by a factor of 2 or greater depending on the spectral position of the mid-infrared pumps for a fixed THz difference-frequency. We have also measured for the first time the linewidth for transitions between the lower quantum cascade laser states, which is critical for determining terahertz nonlinearity and predicting optical loss in quantum cascade laser waveguides. PMID:26879901

  20. Fourier transform infrared spectroscopic imaging of cardiac tissue to detect collagen deposition after myocardial infarction

    NASA Astrophysics Data System (ADS)

    Cheheltani, Rabee; Rosano, Jenna M.; Wang, Bin; Sabri, Abdel Karim; Pleshko, Nancy; Kiani, Mohammad F.

    2012-05-01

    Myocardial infarction often leads to an increase in deposition of fibrillar collagen. Detection and characterization of this cardiac fibrosis is of great interest to investigators and clinicians. Motivated by the significant limitations of conventional staining techniques to visualize collagen deposition in cardiac tissue sections, we have developed a Fourier transform infrared imaging spectroscopy (FT-IRIS) methodology for collagen assessment. The infrared absorbance band centered at 1338 cm-1, which arises from collagen amino acid side chain vibrations, was used to map collagen deposition across heart tissue sections of a rat model of myocardial infarction, and was compared to conventional staining techniques. Comparison of the size of the collagen scar in heart tissue sections as measured with this methodology and that of trichrome staining showed a strong correlation (R=0.93). A Pearson correlation model between local intensity values in FT-IRIS and immuno-histochemical staining of collagen type I also showed a strong correlation (R=0.86). We demonstrate that FT-IRIS methodology can be utilized to visualize cardiac collagen deposition. In addition, given that vibrational spectroscopic data on proteins reflect molecular features, it also has the potential to provide additional information about the molecular structure of cardiac extracellular matrix proteins and their alterations.

  1. Spectroscopic technique with wide range of wavelength information improves near-infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Eda, Hideo; Aoki, Hiromichi; Eura, Shigeru; Ebe, Kazutoshi

    2009-02-01

    Near-infrared spectroscopy (NIRS) calculates hemoglobin parameters, such as oxygenated hemoglobin (oxyHb) and deoxygenated hemoglobin (deoxyHb) using the near-infrared light around the wavelength of 800nm. This is based on the modified-Lambert-Beer's law that changes in absorbance are proportional to changes in hemoglobin parameters. Many conventional measurement methods uses only a few wavelengths, however, in this research, basic examination of NIRS measurement was approached by acquiring wide range of wavelength information. Venous occlusion test was performed by using the blood pressure cuff around the upper arm. Pressure of 100mmHg was then applied for about 3 minutes. During the venous occlusion, the spectrum of the lower arm muscles was measured every 15 seconds, within the range of 600 to 1100nm. It was found that other wavelength bands hold information correlating to this venous occlusion task. Technique of improving the performance of NIRS measurement using the Spectroscopic Method is very important for Brain science.

  2. Ultra-Trace Chemical Sensing with Long-Wave Infrared Cavity-Enhanced Spectroscopic Sensors

    SciTech Connect

    Taubman, Matthew S.; Myers, Tanya L.; Cannon, Bret D.; Williams, Richard M.; Schultz, John F.

    2003-02-20

    The infrared sensors task of Pacific Northwest National Laboratory's (PNNL's) Remote Spectroscopy Project (Task B of Project PL211) is focused on the science and technology of remote and in-situ spectroscopic chemical sensors for detecting proliferation and coun-tering terrorism. Missions to be addressed by remote chemical sensor development in-clude detecting proliferation of nuclear or chemical weapons, and providing warning of terrorist use of chemical weapons. Missions to be addressed by in-situ chemical sensor development include countering terrorism by screening luggage, personnel, and shipping containers for explosives, firearms, narcotics, chemical weapons, or chemical weapons residues, and mapping contaminated areas. The science and technology is also relevant to chemical weapons defense, air operations support, monitoring emissions from chemi-cal weapons destruction or industrial activities, law enforcement, medical diagnostics, and other applications. Sensors for most of these missions will require extreme chemical sensitivity and selectiv-ity because the signature chemicals of importance are expected to be present in low con-centrations or have low vapor pressures, and the ambient air is likely to contain pollutants or other chemicals with interfering spectra. Cavity-enhanced chemical sensors (CES) that draw air samples into optical cavities for laser-based interrogation of their chemical content promise real-time, in-situ chemical detection with extreme sensitivity to specified target molecules and superb immunity to spectral interference and other sources of noise. PNNL is developing CES based on quantum cascade (QC) lasers that operate in the mid-wave infrared (MWIR - 3 to 5 microns) and long-wave infrared (LWIR - 8 to 14 mi-crons), and CES based on telecommunications lasers operating in the short-wave infrared (SWIR - 1 to 2 microns). All three spectral regions are promising because smaller mo-lecular absorption cross sections in the SWIR are offset

  3. Molecular hydraulic properties of montmorillonite: a polarized fourier transform infrared spectroscopic study.

    PubMed

    Amarasinghe, Priyanthi M; Katti, Kalpana S; Katti, Dinesh R

    2008-12-01

    Understanding the rates at which fluid flows into clay interlayers at the molecular level is fundamental to designing an effective clay barrier system. In this work, molecular interactions at the Na-montmorillonite (MMT)-water interface, emphasizing the flow properties of the clay interlayer, have been studied at the molecular and nanoscale level using polarized Fourier transform infrared (FT-IR) spectroscopic and X-ray diffraction (XRD) techniques. Clay-water slurries were smeared on inert gold-coated metal substrates for FT-IR experiments and slurries were smeared on quartz plates for XRD experiments. By analyzing the O-H stretching and H-O-H bending vibrations in clay slurries, it was concluded that the molecular behavior of interlayer water is significantly different from the molecular behavior of bulk water. With increasing clay-water interaction time, it was also seen that the Si-O stretching bands of clay are being significantly altered by the water molecules in the interlayer. Using these spectroscopic techniques we have estimated the time required for water to flow into the clay interlayer. Further, by analyzing the particle size of the clay using atomic force microscopy (AFM) imaging, we were able to estimate the flow velocity of the water in the clay interlayer. This velocity is found to be 3.23 x 10(-9) cm/s. This flow velocity was found to be of the same order of magnitude as the hydraulic conductivity of smectite-type clay reported elsewhere. Also described in this work is the correct positioning of the Si-O out-of-plane vibration band of MMT at the two-layer saturation level in the interlayer. This band was only observed in p-polarized spectra at 1211 cm(-1). Thus, we attribute this band to the Si-O out-of-plane vibration band.

  4. High-dispersion infrared spectroscopic observations of comet 8P/Tuttle with VLT/CRIRES

    NASA Astrophysics Data System (ADS)

    Kobayashi, H.; Bockelée-Morvan, D.; Kawakita, H.; Dello Russo, N.; Jehin, E.; Manfroid, J.; Smette, A.; Hutsemékers, D.; Stüwe, J.; Weiler, M.; Arpigny, C.; Biver, N.; Cochran, A.; Crovisier, J.; Magain, P.; Sana, H.; Schulz, R.; Vervack, R. J.; Weaver, H.; Zucconi, J.-M.

    2010-01-01

    We report on the composition of the Halley-family comet (HFC) 8P/Tuttle investigated with high-dispersion near-infrared spectroscopic observations. The observations were carried out at the ESO VLT (Very Large Telescope) with the CRIRES instrument as part of a multi-wavelength observation campaign of 8P/Tuttle performed in late January and early February 2008. Radar observations suggested that 8P/Tuttle is a contact binary, and it was proposed that these components might be heterogeneous in chemistry. We determined mixing ratios of organic volatiles with respect to H2O and found that mixing ratios were consistent with previous near infrared spectroscopic observations obtained in late December 2007 and in late January 2008. It has been suggested that because 8P/Tuttle is a contact binary, it might be chemically heterogeneous. However, we find no evidence for chemical heterogeneity within the nucleus of 8P/Tuttle. We also compared the mixing ratios of organic molecules in 8P/Tuttle with those of both other HFCs and long period comets (LPCs) and found that HCN, C2H2, and C2H6 are depleted whereas CH4 and CH3OH have normal abundances. This may indicate that 8P/Tuttle was formed in a different region of the early solar nebula than other HFCs and LPCs. We estimated the conversion efficiency from C2H2 to C2H6 by hydrogen addition reactions on cold grains by employing the C2H6/(C2H6+C2H2) ratio. The C2H6/(C2H6+C2H2) ratio in 8P/Tuttle is consistent with the ratios found in other HFCs and LPCs within the error bars. We also discuss the source of C2 and CN based on our observations and conclude that the abundances of C2H2 and C2H6 are insufficient to explain the C2 abundances in comet 8P/Tuttle and that the abundance of HCN is insufficient to explain the CN abundances in the comet, so at least one additional parent is needed for each species, as pointed out in previous study. Based on observations collected at the European Southern Observatory, Paranal, Chile (ESO Prog. 080.C

  5. AKARI NEAR-INFRARED SPECTROSCOPIC SURVEY FOR CO{sub 2} IN 18 COMETS

    SciTech Connect

    Ootsubo, Takafumi; Kawakita, Hideyo; Hamada, Saki; Kobayashi, Hitomi; Yamaguchi, Mitsuru; Usui, Fumihiko; Nakagawa, Takao; Ueno, Munetaka; Ishiguro, Masateru; Sekiguchi, Tomohiko; Watanabe, Jun-ichi; Sakon, Itsuki; Shimonishi, Takashi; Onaka, Takashi

    2012-06-10

    We conducted a spectroscopic survey of cometary volatiles with the Infrared Camera on board the Japanese infrared satellite AKARI in the wavelength range from 2.5 to 5 {mu}m. In our survey, 18 comets, including both the Oort cloud comets and the Jupiter-family comets, were observed in the period from 2008 June to 2010 January, most of which were observed at least twice. The prominent emission bands in the observed spectra are the fundamental vibrational bands of water (H{sub 2}O) at 2.7 {mu}m and carbon dioxide (CO{sub 2}) at 4.3 {mu}m. The fundamental vibrational band of carbon monoxide (CO) around 4.7 {mu}m and the broad emission feature, probably related to carbon-hydrogen-bearing molecules, can also be recognized around the 3.3-3.5-{mu}m region in some of the comets. With respect to H{sub 2}O, gas production rate ratios of CO{sub 2} have been derived in 17 comets, except for the comet 29P/Schwassmann-Wachmann 1. Our data set provides the largest homogeneous database of CO{sub 2}/H{sub 2}O production rate ratios in comets obtained so far. The CO{sub 2}/H{sub 2}O production rate ratios are considered to reflect the composition of cometary ice when a comet is observed at a heliocentric distance within {approx}2.5 AU, since H{sub 2}O ice fully sublimates there. The CO{sub 2}/H{sub 2}O ratio in cometary ice spans from several to {approx}30% among the comets observed at <2.5 AU (13 out of the 17 comets). Alternatively, the ratio of CO/CO{sub 2} in the comets seems to be smaller than unity based on our observations, although we only obtain upper limits for CO in most of the comets.

  6. Progress Towards a High-Precision Infrared Spectroscopic Survey of the H_3^+ Ion

    NASA Astrophysics Data System (ADS)

    Perry, Adam J.; Hodges, James N.; Markus, Charles R.; Kocheril, G. Stephen; Jenkins, Paul A., II; McCall, Benjamin J.

    2015-06-01

    The trihydrogen cation, H_3^+, represents one of the most important and fundamental molecular systems. Having only two electrons and three nuclei, H_3^+ is the simplest polyatomic system and is a key testing ground for the development of new techniques for calculating potential energy surfaces and predicting molecular spectra. Corrections that go beyond the Born-Oppenheimer approximation, including adiabatic, non-adiabatic, relativistic, and quantum electrodynamic corrections are becoming more feasible to calculate. As a result, experimental measurements performed on the H_3^+ ion serve as important benchmarks which are used to test the predictive power of new computational methods. By measuring many infrared transitions with precision at the sub-MHz level it is possible to construct a list of the most highly precise experimental rovibrational energy levels for this molecule. Until recently, only a select handful of infrared transitions of this molecule have been measured with high precision (˜ 1 MHz). Using the technique of Noise Immune Cavity Enhanced Optical Heterodyne Velocity Modulation Spectroscopy, we are aiming to produce the largest high-precision spectroscopic dataset for this molecule to date. Presented here are the current results from our survey along with a discussion of the combination differences analysis used to extract the experimentally determined rovibrational energy levels. O. Polyansky, et al., Phil. Trans. R. Soc. A (2012), 370, 5014. M. Pavanello, et al., J. Chem. Phys. (2012), 136, 184303. L. Diniz, et al., Phys. Rev. A (2013), 88, 032506. L. Lodi, et al., Phys. Rev. A (2014), 89, 032505. J. Hodges, et al., J. Chem. Phys (2013), 139, 164201.

  7. A Theoretical Investigation of the Infrared Spectroscopic Properties of Closed-Shell Polycyclic Aromatic Hydrocarbon Cations

    NASA Technical Reports Server (NTRS)

    Hudgins, Douglas M.; Bauschlicher, Charles W., Jr.; Allamandola, Louis J.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Density functional theory has been employed to calculate the harmonic frequencies and intensities of a range of PAH cations which explore both size and electronic structure effects on the infrared spectroscopic of these species. The sample extends the size range of PAH species considered to more than 50 carbon atoms and includes several representatives from each of two heretofore unexplored categories of PAH cations: (1) fully benzenoid PAH cations whose carbon skeleton is composed of an odd number of carbon atoms and (2) protonated PAH cations. Unlike the radical electronic structures of the PAH cations that have been the subject of previous theoretical and experimental work, the species in these two classes have a closed-shell electronic configuration. The calculated spectra of circumcoronene, C54H18, in both neutral and (radical) cationic form are also reported and compared to those of the other species. Closed-shell species are inherently less reactive than radical (or open-shell) cations and are known to play a role in combustion chemistry. Since interstellar PAHs are typically exposed to abundant atomic hydrogen and are thought to originate under pseudo-combustion conditions in carbon-rich circumstellar shells, such species may represent an important component of the interstellar PAH population. Furthermore, species larger than 50 carbon atoms are more representative of the size of the typical interstellar PAH. Overall, as has been the case for previous studies of PAH radical cations, the general pattern of band positions and intensities are consistent with that of the interstellar infrared emission spectrum. In addition, the spectra of closed-shell and open-shell cations are found to converge with increasing molecular size and are found to be relatively similar for species containing about 50 carbon atoms.

  8. On the importance of image formation optics in the design of infrared spectroscopic imaging systems.

    PubMed

    Mayerich, David; van Dijk, Thomas; Walsh, Michael J; Schulmerich, Matthew V; Carney, P Scott; Bhargava, Rohit

    2014-08-21

    Infrared spectroscopic imaging provides micron-scale spatial resolution with molecular contrast. While recent work demonstrates that sample morphology affects the recorded spectrum, considerably less attention has been focused on the effects of the optics, including the condenser and objective. This analysis is extremely important, since it will be possible to understand effects on recorded data and provides insight for reducing optical effects through rigorous microscope design. Here, we present a theoretical description and experimental results that demonstrate the effects of commonly-employed cassegranian optics on recorded spectra. We first combine an explicit model of image formation and a method for quantifying and visualizing the deviations in recorded spectra as a function of microscope optics. We then verify these simulations with measurements obtained from spatially heterogeneous samples. The deviation of the computed spectrum from the ideal case is quantified via a map which we call a deviation map. The deviation map is obtained as a function of optical elements by systematic simulations. Examination of deviation maps demonstrates that the optimal optical configuration for minimal deviation is contrary to prevailing practice in which throughput is maximized for an instrument without a sample. This report should be helpful for understanding recorded spectra as a function of the optics, the analytical limits of recorded data determined by the optical design, and potential routes for optimization of imaging systems.

  9. Infrared spectroscopic measurements of halogenated source gases in the stratosphere with the ATMOS instrument

    NASA Technical Reports Server (NTRS)

    Zander, R.; Rinsland, C. P.; Farmer, C. B.; Norton, R. H.

    1987-01-01

    The volume mixing ratios of the six most important halogenated source species (CH3Cl, CF2Cl2, CFCl3, CHF2Cl, CCl4, and CF4) have been retrieved over the 10- to 30-km altitude range from the analysis of 0.01/cm resolution infrared solar occultation spectra recorded near 30 deg N and 47 deg S latitudes with the ATMOS (Atmospheric Trace Molecule Spectroscopy) instrument, operating from on board Spacelab 3 (April-May 1985). The results reported here, although in satisfactory agreement with recent in situ values obtained from air sampling techniques, are limited in accuracy by the limited absorption representative of most of the species and by uncertainties in the spectroscopic parameters currently available for these gases. They demonstrate, however, the power of the IR remote sensing approach for evaluating on a global scale the total chlorine budget of the atmosphere, and they provide an independent set of simultaneous data acquired for the important source and reservoir halogenated molecular species in the upper atmosphere.

  10. Near infrared photometric and optical spectroscopic study of 22 low mass star clusters embedded in nebulae

    NASA Astrophysics Data System (ADS)

    Soares, J. B.; Bica, E.; Ahumada, A. V.; Clariá, J. J.

    2008-02-01

    Aims:Among the star clusters in the Galaxy, those embedded in nebulae represent the youngest group, which has only recently been explored. The analysis of a sample of 22 candidate embedded stellar systems in reflection nebulae and/or HII environments is presented. Methods: We employed optical spectroscopic observations of stars in the directions of the clusters carried out at CASLEO (Argentina) together with near infrared photometry from the 2MASS catalogue. Our analysis is based on source surface density, colour-colour diagrams and on theoretical pre-main sequence isochrones. We take into account the field star contamination by carrying out a statistical subtraction. Results: The studied objects have the characteristics of low mass systems. We derive their fundamental parameters. Most of the cluster ages are younger than 2 Myr. The studied embedded stellar systems in reflection nebulae and/or HII region complexes do not have stars of spectral types earlier than B. The total stellar masses locked in the clusters are in the range 20-220 M⊙. They are found to be gravitationally unstable and are expected to dissolve in a timescale of a few Myr. Based on observations made at Complejo Astronómico El Leoncito, which is operated under agreement between the Consejo Nacional de Investigaciones Científicas y Técnicas de la República Argentina and the National Universities of La Plata, Córdoba and San Juan, Argentina.

  11. Real-time near-infrared spectroscopic inspection system for adulterated sesame oil

    NASA Astrophysics Data System (ADS)

    Kang, Sukwon; Lee, Kang-jin; Son, Jaeryong; Kim, Moon S.

    2010-04-01

    Sesame seed oil is popular and expensive in Korea and has been often mixed with other less expensive vegetable oils. The objective of this research is to develop an economical and rapid adulteration determination system for sesame seed oil mixed with other vegetable oils. A recently developed inspection system consists of a light source, a measuring unit, a spectrophotometer, fiber optics, and a data acquisition module. A near-infrared transmittance spectroscopic method was used to develop the prediction model using Partial Least Square (PLS). Sesame seed oil mixed with a range of concentrations of corn, or perilla, or soybean oil was measured in 8 mm diameter glass tubes. For the model development, a correlation coefficient value of 0.98 was observed for corn, perilla, and soybean oil mixtures with standard errors of correlation of 6.32%, 6.16%, and 5.67%, respectively. From the prediction model, the correlation coefficients of corn oil, perilla oil, and soybean oil were 0.98, 0.97 and 0.98, respectively. The Standard Error of Prediction (SEP) for corn oil, perilla oil, and soybean oil were 6.52%, 6.89% and 5.88%, respectively. The results indicated that this system can potentially be used as a rapid non-destructive adulteration analysis tool for sesame seed oil mixed with other vegetable oils.

  12. Instrument for near infrared emission spectroscopic probing of human fingertips in vivo.

    PubMed

    Chaiken, J; Deng, Bin; Bussjager, Rebecca J; Shaheen, George; Rice, David; Stehlik, Dave; Fayos, John

    2010-03-01

    We present instrumentation for probing of volar side fingertip capillary beds with free space coupled near infrared light while collecting Raman, Rayleigh, and Mie scattered light as well as fluorescence. Fingertip skin capillary beds are highly vascularized relative to other tissues and present a desirable target for noninvasive probing of blood. But human hands and fingers in particular are also highly idiosyncratic body parts requiring specific apparatus to allow careful and methodical spectroscopic probing. The apparatus includes means for precise and reproducible placement of the tissues relative to the optical aperture. Appropriate means are provided for applying and maintaining pressure to keep surface tissues immobile during experiments while obtaining the desired blood content and flow. Soft matter, e.g., skin, extrudes into the aperture in response to any applied pressure, e.g., to keep the tissue in registration with the optical system, so the position, contact area, pressure, and force are continuously measured and recorded to produce feedback for an actuator applying force and to discern the compliance of the test subject. The compliance strongly affects the reliability of the measurement and human factors must be adequately managed in the case of in vivo probing. The apparatus produces reproducible observations and measurements that allow consistent probing of the tissues of a wide range of skin types.

  13. On the importance of image formation optics in the design of infrared spectroscopic imaging systems

    PubMed Central

    Mayerich, David; van Dijk, Thomas; Walsh, Michael; Schulmerich, Matthew; Carney, P. Scott

    2014-01-01

    Infrared spectroscopic imaging provides micron-scale spatial resolution with molecular contrast. While recent work demonstrates that sample morphology affects the recorded spectrum, considerably less attention has been focused on the effects of the optics, including the condenser and objective. This analysis is extremely important, since it will be possible to understand effects on recorded data and provides insight for reducing optical effects through rigorous microscope design. Here, we present a theoretical description and experimental results that demonstrate the effects of commonly-employed cassegranian optics on recorded spectra. We first combine an explicit model of image formation and a method for quantifying and visualizing the deviations in recorded spectra as a function of microscope optics. We then verify these simulations with measurements obtained from spatially heterogeneous samples. The deviation of the computed spectrum from the ideal case is quantified via a map which we call a deviation map. The deviation map is obtained as a function of optical elements by systematic simulations. Examination of deviation maps demonstrates that the optimal optical configuration for minimal deviation is contrary to prevailing practice in which throughput is maximized for an instrument without a sample. This report should be helpful for understanding recorded spectra as a function of the optics, the analytical limits of recorded data determined by the optical design, and potential routes for optimization of imaging systems. PMID:24936526

  14. Multi-steps infrared spectroscopic characterization of the effect of flowering on medicinal value of Cistanche tubulosa

    NASA Astrophysics Data System (ADS)

    Lai, Zuliang; Xu, Peng; Wu, Peiyi

    2009-01-01

    Multi-steps infrared spectroscopic methods, including conventional Fourier transform infrared spectroscopy (FT-IR), second derivative spectroscopy and two-dimensional infrared (2D-IR) correlation spectroscopy, have been proved to be effective methods to examine complicated mixture system such as Chinese herbal medicine. The focus of this paper is the investigation on the effect of flowering on the pharmaceutical components of Cistanche tubulosa by using the Multi-steps infrared spectroscopic method. Power-spectrum analysis is applied to improve the resolution of 2D-IR contour maps and much more details of overlapped peaks are detected. According to the results of FT-IR and second derivative spectra, the peak at 1732 cm -1 assigned to C dbnd O is stronger before flowering than that after flowering in the stem, while more C dbnd O groups are found in the top after flowering. The spectra of root change a lot in the process of flowering for the reason that many peaks shift and disappear after flowering. Seven peaks in the spectra of stem, which are assigned to different kinds of glycoside components, are distinguished by Power-spectra in the range of 900-1200 cm -1. The results provide a scientific explanation to the traditional experience that flowering consumes the pharmaceutical components in stem and the seeds absorb some nutrients of stem after flowering. In conclusion, the Multi-steps infrared spectroscopic method combined with Power-spectra is a promising method to investigate the flowering process of C. tubulosa and discriminate various parts of the herbal medicine.

  15. Critical dimension uniformity control with combined ellipsometry and reflectometry

    NASA Astrophysics Data System (ADS)

    Opsal, Jon; Leng, Jingmin; Cao, Xuelong

    2005-05-01

    In the 90nm node and beyond, Critical Dimension Uniformity (CDU) control is essential for today's high performance IC devices. The desired control of CDU is just under 2nm (3 sigma) across a 300mm wafer with 577 die. In this study we used an Opti-Probe 7341 RT/CD system that combines broadband (190-840 nm) spectroscopic ellipsometry (SE), spectroscopic reflectometry (BB), single wavelength (673 nm) beam profile reflectometry (BPR) and single wavelength (633nm) absolute ellipsometry (AE). All of the above technologies were used to characterize the optical dispersions of the individual films in the stack of interest, resist/barc/sion/poly/oxide/silicon. We then used these dispersion results and the SE and BB technologies to characterize the CDU of the patterned wafer. With the SE technology we measured CDU's in the range of 1.9-2.0 nm compared with BB measured CDU's in the range of 4-5 nm, both SE and BB wavelength were in the range of 240 nm-780 nm. However, if the wavelength range of SE and BB were extended to 190nm-840 nm, the CDU with SE stayed at the same level while that of BB reduced a factor of 2 to about 2.0-2.5 nm.

  16. Near-infrared spectroscopic studies of self-forming lipids and nanovesicles

    NASA Astrophysics Data System (ADS)

    Bista, Rajan K.; Bruch, Reinhard F.

    2009-02-01

    Lipids and liposomes have remained an active research topic for several decades due to their significance as membrane model. Several vibrational spectroscopic techniques have been developed and employed to study the properties of lipids and liposomes. In this study, near-infrared (NIR) spectroscopy has been used to analyze a suite of synthesized PEGylated lipids trademarked as QuSomesTM. The three amphiphiles used in this study, differ in their apolar hydrophobic chain length and contain various units of polar polyethylene glycol (PEG) head groups. In contrast to conventional phospholipids, this new kind of lipids forms liposomes spontaneously upon hydration, without the supply of external activation energy. Whilst the NIR spectra of QuSomesTM show a common pattern, differences in the spectra are observed which enable the lipids to be distinguished. NIR absorption spectra of these new artificial lipids have been recorded in the spectral range of 4800-9000 cm-1 (~2100-1100 nm) by using a new miniaturized spectrometer based on micro-optical-electro-mechanical systems (MOEMS) technology. In particular, we have established specific band structures as "molecular fingerprints" corresponding to overtones and combinations vibrational modes involving mainly C-H and O-H functional groups for sample analysis of QuSomesTM. Moreover, we have demonstrated that the nanovesicles formed by such lipids in polar solvents show high stability and obey Beer's law at low concentration. The results reported in this study may find applications in various field including the development of lipids based drug delivery systems.

  17. Spectroscopic Line Parameters in the Infrared Bands of CH3CN and C2H6

    NASA Astrophysics Data System (ADS)

    Devi, V. Malathy

    2010-10-01

    In this paper, measurements of critical spectroscopic line parameters such as positions, absolute intensities and pressure broadened (self- and N2) half-width coefficients for transitions in the ν4 band of CH3CN (acetonitile, ethanenitrile, methyl cyanide) and the ν9 band of C2H6 (ethane) are presented. CH3CN has been measured by remote sensing in the earth's atmosphere, in comets and in interstellar molecular clouds. It is also a constituent in the atmospheres of Titan, Saturn's largest moon. Likewise, C2H6 is also an important constituent in the atmosphere of earth, the giant planets and comets. The 12- μm(˜720-850 cm-1) emission features of this molecule have been observed in spectra from outer solar system bodies of Jupiter, Saturn, Neptune and Titan. Because of their importance in remote sensing measurements, we recently recorded and analyzed a large number of laboratory infrared absorption spectra of pure and N2-broadened spectra of both these molecular bands. Spectra used in these analyses were recorded using either the Bruker IFS 125HR or the Bruker IFS 120HR FTS located at the Pacific Northwest National Laboratory (PNNL), in Richland Washington. To retrieve the various spectral line parameters, a multispectrum nonlinear least squares fitting algorithm was employed and all spectra belonging to each band were fitted simultaneously. Using this fitting technique, the same spectral regions from multiple spectra were fit all at once to maximize the accuracy of the retrieved parameters. The results obtained from present analyses are briefly discussed. In the case of C2H6 both room- and low temperature (˜210-296 K) spectra were recorded, but results from analyzing only room-temperature spectra will be discussed in this work.

  18. A combined far-infrared spectroscopic and electrochemical approach for the study of iron-sulfur proteins.

    PubMed

    El Khoury, Youssef; Hellwig, Petra

    2011-10-04

    Herein, we present the development of a far-infrared spectroscopic approach for studying metalloenzyme active sites in a redox-dependent manner. An electrochemical cell with 5 mm path and based on silicon windows was found to be appropriate for the measurement of aqueous solutions down to 200 cm(-1) . The cell was probed with the infrared redox signature of the metal-ligand vibrations of different iron-sulfur proteins. Each Fe-S cluster type was found to show a specific spectral signature. As a common feature, a downshift of the frequency of the Fe-S vibrations was seen upon reduction, in line with the increase of the Fe-S bond. This downshift was found to be fully reversible. Electrochemically induced FTIR difference spectroscopy in the far infrared is now possible, opening new perspectives on the understanding of metalloproteins in function of the redox state.

  19. Adulteration screening of botanical materials by a sensitive and model-free approach using infrared spectroscopic imaging and two-dimensional correlation infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Chen, Jian-bo; Zhou, Qun; Sun, Su-qin

    2016-11-01

    Infrared (IR) spectroscopy is often used as a simple, fast, and green method for the adulteration screening of botanical materials for foods and herbs. However, the overlapping of absorption signals of various substances significantly decrease the sensitivity and specificity of IR spectroscopy in the detection of adulterated samples. In this research, a model-free approach is proposed for the sensitive and non-targeted screening of botanical materials adulterated by adding other plant materials. First, the spectra of the entities in the test sample are collected by near-infrared spectroscopic imaging and clustered by unsupervised pattern recognition methods. The sample may be adulterated if there are two or more clusters of the entities. Next, the entities of different clusters are characterized by mid-infrared spectroscopy to interpret the chemical compositions to determine the clustering is caused whether by adulteration or other reasons. Second derivative spectroscopy and two-dimensional correlation spectroscopy are often needed to resolve the overlapped bands mathematically or experimentally to find the characteristic signals to identify the authentic and adulterant entities. The feasibility of this approach was proved by the simulated adulterated sample of saffron. In conclusion, botanical materials adulterated by adding other plant materials can be detected by a simple, fast, sensitive, and green screening approach using IR spectroscopic imaging, two-dimensional correlation spectroscopy, and necessary chemometrics techniques.

  20. Noninvasive, near infrared spectroscopic-measured muscle pH and PO2 indicate tissue perfusion for cardiac surgical patients undergoing cardiopulmonary bypass

    NASA Technical Reports Server (NTRS)

    Soller, Babs R.; Idwasi, Patrick O.; Balaguer, Jorge; Levin, Steven; Simsir, Sinan A.; Vander Salm, Thomas J.; Collette, Helen; Heard, Stephen O.

    2003-01-01

    OBJECTIVE: To determine whether near infrared spectroscopic measurement of tissue pH and Po2 has sufficient accuracy to assess variation in tissue perfusion resulting from changes in blood pressure and metabolic demand during cardiopulmonary bypass. DESIGN: Prospective clinical study. SETTING: Academic medical center. SUBJECTS: Eighteen elective cardiac surgical patients. INTERVENTION: Cardiac surgery under cardiopulmonary bypass. MEASUREMENTS AND MAIN RESULTS: A near infrared spectroscopic fiber optic probe was placed over the hypothenar eminence. Reference Po2 and pH sensors were inserted in the abductor digiti minimi (V). Data were collected every 30 secs during surgery and for 6 hrs following cardiopulmonary bypass. Calibration equations developed from one third of the data were used with the remaining data to investigate sensitivity of the near infrared spectroscopic measurement to physiologic changes resulting from cardiopulmonary bypass. Near infrared spectroscopic and reference pH and Po2 measurements were compared for each subject using standard error of prediction. Near infrared spectroscopic pH and Po2 at baseline were compared with values during cardiopulmonary bypass just before rewarming commenced (hypotensive, hypothermic), after rewarming (hypotensive, normothermic) just before discontinuation of cardiopulmonary bypass, and at 6 hrs following cardiopulmonary bypass (normotensive, normothermic) using mixed-model analysis of variance. Near infrared spectroscopic pH and Po2 were well correlated with the invasive measurement of pH (R2 =.84) and Po2 (R 2 =.66) with an average standard error of prediction of 0.022 +/- 0.008 pH units and 6 +/- 3 mm Hg, respectively. The average difference between the invasive and near infrared spectroscopic measurement was near zero for both the pH and Po2 measurements. Near infrared spectroscopic Po2 significantly decreased 50% on initiation of cardiopulmonary bypass and remained depressed throughout the bypass and

  1. Book Review: Reiner Salzer and Heinz W. Siesler (Eds.): Infrared and Raman spectroscopic imaging, 2nd ed.

    SciTech Connect

    Moore, David Steven

    2015-05-10

    This second edition of "Infrared and Raman Spectroscopic Imaging" propels practitioners in that wide-ranging field, as well as other readers, to the current state of the art in a well-produced and full-color, completely revised and updated, volume. This new edition chronicles the expanded application of vibrational spectroscopic imaging from yesterday's time-consuming point-by-point buildup of a hyperspectral image cube, through the improvements afforded by the addition of focal plane arrays and line scan imaging, to methods applicable beyond the diffraction limit, instructs the reader on the improved instrumentation and image and data analysis methods, and expounds on their application to fundamental biomedical knowledge, food and agricultural surveys, materials science, process and quality control, and many others.

  2. Continuous statistical modelling for rapid detection of adulteration of extra virgin olive oil using mid infrared and Raman spectroscopic data.

    PubMed

    Georgouli, Konstantia; Martinez Del Rincon, Jesus; Koidis, Anastasios

    2017-02-15

    The main objective of this work was to develop a novel dimensionality reduction technique as a part of an integrated pattern recognition solution capable of identifying adulterants such as hazelnut oil in extra virgin olive oil at low percentages based on spectroscopic chemical fingerprints. A novel Continuous Locality Preserving Projections (CLPP) technique is proposed which allows the modelling of the continuous nature of the produced in-house admixtures as data series instead of discrete points. The maintenance of the continuous structure of the data manifold enables the better visualisation of this examined classification problem and facilitates the more accurate utilisation of the manifold for detecting the adulterants. The performance of the proposed technique is validated with two different spectroscopic techniques (Raman and Fourier transform infrared, FT-IR). In all cases studied, CLPP accompanied by k-Nearest Neighbors (kNN) algorithm was found to outperform any other state-of-the-art pattern recognition techniques.

  3. Book Review: Reiner Salzer and Heinz W. Siesler (Eds.): Infrared and Raman spectroscopic imaging, 2nd ed.

    DOE PAGES

    Moore, David Steven

    2015-05-10

    This second edition of "Infrared and Raman Spectroscopic Imaging" propels practitioners in that wide-ranging field, as well as other readers, to the current state of the art in a well-produced and full-color, completely revised and updated, volume. This new edition chronicles the expanded application of vibrational spectroscopic imaging from yesterday's time-consuming point-by-point buildup of a hyperspectral image cube, through the improvements afforded by the addition of focal plane arrays and line scan imaging, to methods applicable beyond the diffraction limit, instructs the reader on the improved instrumentation and image and data analysis methods, and expounds on their application to fundamentalmore » biomedical knowledge, food and agricultural surveys, materials science, process and quality control, and many others.« less

  4. Total internal reflection ellipsometry: principles and applications.

    PubMed

    Arwin, Hans; Poksinski, Michal; Johansen, Knut

    2004-05-20

    A concept for a measurement technique based on ellipsometry in conditions of total internal reflection is presented. When combined with surface plasmon resonance (SPR) effects, this technique becomes powerful for monitoring and analyzing adsorption and desorption on thin semitransparent metal films as well as for analyzing the semitransparent films themselves. We call this technique total internal reflection ellipsometry (TIRE). The theory of ellipsometry under total internal reflection combined with SPR is discussed for some simple cases. For more advanced cases and to prove the concept, simulations are performed with the Fresnel formalism. The use of TIRE is exemplified by applications in protein adsorption, corrosion monitoring, and adsorption from opaque liquids on metal surfaces. Simulations and experiments show greatly enhanced thin-film sensitivity compared with ordinary ellipsometry.

  5. Infrared Spectroscopic Analyses of Sulfate, Nitrate, and Carbonate-bearing Atacama Desert Soils: Analogs for the Interpretation of Infrared Spectra from the Martian Surface

    NASA Technical Reports Server (NTRS)

    Dalton, J. B.; Dalton, J. B.; Ewing, S. A.; Amundson, R.; McKay, C. P.

    2005-01-01

    The Atacama Desert of northern Chile is the driest desert on Earth, receiving only a few mm of rain per decade. The Mars climate may, in the past, have been punctuated by short-lived episodes of aqueous activity. The paleo-Martian environment may have had aqueous conditions similar to the current conditions that exist in the Atacama, and Mars soils may have formed with soil chemistry and mineralogy similar to those found in the Atacama. Remote and in-situ analysis of the Martian surface using infrared technology has a long heritage. Future investigations of the subsurface mineralogy are likely to build upon this heritage, and will benefit from real life lessons to be learned from terrestrial analog studies. To that end, preliminary results from a near- and mid-infrared spectroscopic study of Atacama soil profiled at a range of depths are presented.

  6. A spectroscopic comparison of selected Chinese kaolinite, coal bearing kaolinite and halloysite--a mid-infrared and near-infrared study.

    PubMed

    Cheng, Hongfei; Yang, Jing; Liu, Qinfu; Zhang, Jinshan; Frost, Ray L

    2010-11-01

    Mid-infrared (MIR) and near-infrared (NIR) spectroscopy have been compared and evaluated for differentiating kaolinite, coal bearing kaolinite and halloysite. Kaolinite, coal bearing kaolinite and halloysite are the three relative abundant minerals of the kaolin group, especially in China. In the MIR spectra, the differences are shown in the 3000-3600 cm⁻¹ between kaolinite and halloysite. It cannot obviously differentiate the kaolinite and halloysite, leaving alone kaolinite and coal bearing kaolinite. However, NIR, together with MIR, gives us the sufficient evidence to differentiate the kaolinite and halloysite, especially kaolinite and coal bearing kaolinite. There are obvious differences between kaolinite and halloysite in all range of their spectra, and they also show some difference between kaolinite and coal bearing kaolinite. Therefore, the reproducibility of measurement, signal to noise ratio and richness of qualitative information should be simultaneously considered for proper selection of a spectroscopic method for mineral analysis.

  7. Spectroscopic-ellipsometric study of native oxide removal by liquid phase HF process

    PubMed Central

    Kurhekar, Anil Sudhakar; Apte, Prakash R

    2014-01-01

    Ex situ spectroscopic ellipsometry (SE) measurements have been employed to investigate the effect of liquid-phase hydrofluoric acid (HF) cleaning on Si<100> surfaces for microelectromechanical systems application. The hydrogen terminated (H-terminated) Si surface was realized as an equivalent dielectric layer, and SE measurements are performed. The SE analyses indicate that after a 20-s 100:5 HF dip with rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed and analyzed by the ex-situ SE. Evidence for desorption of the H-terminated Si surface layer is studied using Fourier transform infrared spectroscopy and ellipsometry, and discussed. This piece of work explains the usage of an ex situ, non-destructive technique capable of showing state of passivation, the H-termination of Si<100> surfaces. PMID:24619506

  8. Spectroscopic-ellipsometric study of native oxide removal by liquid phase HF process

    NASA Astrophysics Data System (ADS)

    Kurhekar, Anil Sudhakar; Apte, Prakash R.

    2013-02-01

    Ex situ spectroscopic ellipsometry (SE) measurements have been employed to investigate the effect of liquid-phase hydrofluoric acid (HF) cleaning on Si<100> surfaces for microelectromechanical systems application. The hydrogen terminated (H-terminated) Si surface was realized as an equivalent dielectric layer, and SE measurements are performed. The SE analyses indicate that after a 20-s 100:5 HF dip with rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed and analyzed by the ex-situ SE. Evidence for desorption of the H-terminated Si surface layer is studied using Fourier transform infrared spectroscopy and ellipsometry, and discussed. This piece of work explains the usage of an ex situ, non-destructive technique capable of showing state of passivation, the H-termination of Si<100> surfaces.

  9. Towards a wearable near infrared spectroscopic probe for monitoring concentrations of multiple chromophores in biological tissue in vivo

    PubMed Central

    Chitnis, Danial; Airantzis, Dimitrios; Highton, David; Williams, Rhys; Phan, Phong; Giagka, Vasiliki; Powell, Samuel; Cooper, Robert J.; Tachtsidis, Ilias; Smith, Martin; Elwell, Clare E.; Hebden, Jeremy C.; Everdell, Nicholas

    2016-01-01

    The first wearable multi-wavelength technology for functional near-infrared spectroscopy has been developed, based on a custom-built 8-wavelength light emitting diode (LED) source. A light-weight fibreless probe is designed to monitor changes in the concentrations of multiple absorbers (chromophores) in biological tissue, the most dominant of which at near-infrared wavelengths are oxyhemoglobin and deoxyhemoglobin. The use of multiple wavelengths enables signals due to the less dominant chromophores to be more easily distinguished from those due to hemoglobin and thus provides more complete and accurate information about tissue oxygenation, hemodynamics, and metabolism. The spectroscopic probe employs four photodiode detectors coupled to a four-channel charge-to-digital converter which includes a charge integration amplifier and an analogue-to-digital converter (ADC). Use of two parallel charge integrators per detector enables one to accumulate charge while the other is being read out by the ADC, thus facilitating continuous operation without dead time. The detector system has a dynamic range of about 80 dB. The customized source consists of eight LED dies attached to a 2 mm × 2 mm substrate and encapsulated in UV-cured epoxy resin. Switching between dies is performed every 20 ms, synchronized to the detector integration period to within 100 ns. The spectroscopic probe has been designed to be fully compatible with simultaneous electroencephalography measurements. Results are presented from measurements on a phantom and a functional brain activation study on an adult volunteer, and the performance of the spectroscopic probe is shown to be very similar to that of a benchtop broadband spectroscopy system. The multi-wavelength capabilities and portability of this spectroscopic probe will create significant opportunities for in vivo studies in a range of clinical and life science applications. PMID:27370501

  10. Towards a wearable near infrared spectroscopic probe for monitoring concentrations of multiple chromophores in biological tissue in vivo

    NASA Astrophysics Data System (ADS)

    Chitnis, Danial; Airantzis, Dimitrios; Highton, David; Williams, Rhys; Phan, Phong; Giagka, Vasiliki; Powell, Samuel; Cooper, Robert J.; Tachtsidis, Ilias; Smith, Martin; Elwell, Clare E.; Hebden, Jeremy C.; Everdell, Nicholas

    2016-06-01

    The first wearable multi-wavelength technology for functional near-infrared spectroscopy has been developed, based on a custom-built 8-wavelength light emitting diode (LED) source. A lightweight fibreless probe is designed to monitor changes in the concentrations of multiple absorbers (chromophores) in biological tissue, the most dominant of which at near-infrared wavelengths are oxyhemoglobin and deoxyhemoglobin. The use of multiple wavelengths enables signals due to the less dominant chromophores to be more easily distinguished from those due to hemoglobin and thus provides more complete and accurate information about tissue oxygenation, hemodynamics, and metabolism. The spectroscopic probe employs four photodiode detectors coupled to a four-channel charge-to-digital converter which includes a charge integration amplifier and an analogue-to-digital converter (ADC). Use of two parallel charge integrators per detector enables one to accumulate charge while the other is being read out by the ADC, thus facilitating continuous operation without dead time. The detector system has a dynamic range of about 80 dB. The customized source consists of eight LED dies attached to a 2 mm × 2 mm substrate and encapsulated in UV-cured epoxy resin. Switching between dies is performed every 20 ms, synchronized to the detector integration period to within 100 ns. The spectroscopic probe has been designed to be fully compatible with simultaneous electroencephalography measurements. Results are presented from measurements on a phantom and a functional brain activation study on an adult volunteer, and the performance of the spectroscopic probe is shown to be very similar to that of a benchtop broadband spectroscopy system. The multi-wavelength capabilities and portability of this spectroscopic probe will create significant opportunities for in vivo studies in a range of clinical and life science applications.

  11. QUANTITATIVE FOURIER TRANSFORM INFRARED SPECTROSCOPIC INVESTIGATION OF HUMIC SUBSTANCE FUNCTIONAL GROUP COMPOSITION

    EPA Science Inventory

    Infrared (IR) spectroscopy has been widely used for the structural investigation of humic substances. Although Fourier Transform Infrared (FTIR) instrumentation has been available for sometime, relatively little work with these instruments has been reported for humic substances,...

  12. A monitoring campaign for Luhman 16AB. I. Detection of resolved near-infrared spectroscopic variability

    SciTech Connect

    Burgasser, Adam J.; Gillon, Michaël; Jehin, E.; Delrez, L.; Opitom, C.; Faherty, Jacqueline K.; Radigan, Jacqueline; Triaud, Amaury H. M. J.; Plavchan, Peter

    2014-04-10

    We report resolved near-infrared spectroscopic monitoring of the nearby L dwarf/T dwarf binary WISE J104915.57–531906.1AB (Luhman 16AB), as part of a broader campaign to characterize the spectral energy distribution and temporal variability of this system. A continuous 45 minute sequence of low-resolution IRTF/SpeX data spanning 0.8-2.4 μm were obtained, concurrent with combined-light optical photometry with ESO/TRAPPIST. Our spectral observations confirm the flux reversal of this binary, and we detect a wavelength-dependent decline in the relative spectral fluxes of the two components coincident with a decline in the combined-light optical brightness of the system over the course of the observation. These data are successfully modeled as a combination of achromatic (brightness) and chromatic (color) variability in the T0.5 Luhman 16B, consistent with variations in overall cloud opacity; and no significant variability was found in L7.5 Luhman 16A, consistent with recent resolved photometric monitoring. We estimate a peak-to-peak amplitude of 13.5% at 1.25 μm over the full light curve. Using a simple two-spot brightness temperature model for Luhman 16B, we infer an average cold covering fraction of ≈30%-55%, varying by 15%-30% over a rotation period assuming a ≈200-400 K difference between hot and cold regions. We interpret these variations as changes in the covering fraction of a high cloud deck and corresponding 'holes' which expose deeper, hotter cloud layers, although other physical interpretations are possible. A Rhines scale interpretation for the size of the variable features explains an apparent correlation between period and amplitude for Luhman 16B and the variable T dwarfs SIMP 0136+0933 and 2MASS J2139+0220, and predicts relatively fast winds (1-3 km s{sup –1}) for Luhman 16B consistent with light curve evolution on an advective time scale (1-3 rotation periods). The strong variability observed in this flux reversal brown dwarf pair supports

  13. A Monitoring Campaign for Luhman 16AB. I. Detection of Resolved Near-infrared Spectroscopic Variability

    NASA Astrophysics Data System (ADS)

    Burgasser, Adam J.; Gillon, Michaël; Faherty, Jacqueline K.; Radigan, Jacqueline; Triaud, Amaury H. M. J.; Plavchan, Peter; Street, Rachel; Jehin, E.; Delrez, L.; Opitom, C.

    2014-04-01

    We report resolved near-infrared spectroscopic monitoring of the nearby L dwarf/T dwarf binary WISE J104915.57-531906.1AB (Luhman 16AB), as part of a broader campaign to characterize the spectral energy distribution and temporal variability of this system. A continuous 45 minute sequence of low-resolution IRTF/SpeX data spanning 0.8-2.4 μm were obtained, concurrent with combined-light optical photometry with ESO/TRAPPIST. Our spectral observations confirm the flux reversal of this binary, and we detect a wavelength-dependent decline in the relative spectral fluxes of the two components coincident with a decline in the combined-light optical brightness of the system over the course of the observation. These data are successfully modeled as a combination of achromatic (brightness) and chromatic (color) variability in the T0.5 Luhman 16B, consistent with variations in overall cloud opacity; and no significant variability was found in L7.5 Luhman 16A, consistent with recent resolved photometric monitoring. We estimate a peak-to-peak amplitude of 13.5% at 1.25 μm over the full light curve. Using a simple two-spot brightness temperature model for Luhman 16B, we infer an average cold covering fraction of ≈30%-55%, varying by 15%-30% over a rotation period assuming a ≈200-400 K difference between hot and cold regions. We interpret these variations as changes in the covering fraction of a high cloud deck and corresponding "holes" which expose deeper, hotter cloud layers, although other physical interpretations are possible. A Rhines scale interpretation for the size of the variable features explains an apparent correlation between period and amplitude for Luhman 16B and the variable T dwarfs SIMP 0136+0933 and 2MASS J2139+0220, and predicts relatively fast winds (1-3 km s-1) for Luhman 16B consistent with light curve evolution on an advective time scale (1-3 rotation periods). The strong variability observed in this flux reversal brown dwarf pair supports the model of

  14. Infrared Spectroscopic Evidence of Surface Speciation of Amino Acids on Titanium Dioxide

    NASA Astrophysics Data System (ADS)

    Jonsson, C. M.; Jonsson, C. L.; Parikh, S. J.; Sverjensky, D. A.; Cleaves, H. J.; Hazen, R. M.

    2008-12-01

    Interactions that occur at the interface between molecules and mineral surfaces in the presence of water are integral to many chemical and physical processes, including the behavior of pollutants in the environment, metal implants in the human body, and perhaps the origin of life. During the emergence of life, mineral surfaces may have played a role in the selection of amino acids, leading to the formation of proteins that are essential building blocks of life. To investigate this hypothesis, we are studying two amino acids, glutamic (Glu) and aspartic (Asp) acid, and their adsorption to the rutile form of titanium dioxide as a function of pH and surface coverage in electrolyte solutions. The objective is to get a fundamental understanding of the speciation and coordination chemistry of these amino acids at the rutile surface. We used attenuated total reflectance (ATR) Fourier transform infrared (FTIR) spectroscopy to investigate the adsorption of Glu on rutile, and a previously published ATR-FTIR study [1] of Asp and Glu adsorption on an amorphous titanium dioxide film was used as a guide to peak assignment and interpretation of our FTIR spectra. Binding of Glu to both surfaces occurs primarily through one or both of the carboxyl groups, implying that at least two types of surface complexes are formed in a proportion presumably dependent on surface coverage and pH. The interpretation of our results suggests that Glu binds to rutile in a mixed chelating-monodentate fashion involving both carboxyl groups (Glu lying down at the surface), and in a chelating fashion involving only the gamma carboxyl group (Glu standing up at the surface). FTIR results also show that the intensity of the amine peak increases with sorption, which is possibly a consequence of the amine group being brought closer to the surface but not binding directly to it. Glu adsorption on rutile is favored at low pH, based on results from batch adsorption experiments. We have commenced a systematic

  15. The GTC mid-infrared spectroscopic program of primitive outer-belt asteroids

    NASA Astrophysics Data System (ADS)

    Licandro, J.; Alvarez-Iglesias, C. Carlos; Cabrera-Lavers, A.; Ali-Lagoa, V.; Pinilla-Alonso, N.; Campins, H.; de Leon, J.; Kelley, M.

    2014-07-01

    Asteroids in the outer edge of the asteroid belt (Cybeles, Hildas, and Jupiter Trojans) may provide a number of clues to the origin and evolution of the asteroid belt and the formation of our planetary system. They have a pristine composition, experienced little heating and may contain a significant fraction of ice in their interiors. The origin of these populations is still under debate. Levison et al. (2009) suggested that a large fraction of these bodies are transneptunian objects (TNOs) moved to these resonances in an early epoch of the Solar System called the ''Late Heavy Bombardment'' (LHB). To compare the physical properties of these asteroid populations with TNOs and comets is thus a strong test of dynamical models. In mid 2013, we started a mid-infrared photometric and spectroscopic program in the N-band using the CANARICAM camera-spectrograph at the 10.4-m GTC telescope at the ''Roque de los Muchachos'' Obserbatory (Canary Islands, Spain). We aim to study the surface composition and key properties such as radius, albedo, and thermal inertia based on their low-resolution 8--13-micron spectra and N-band photometry. We already obtained the spectra of 5 objects, that of (225) Henrieta is shown as an example in the Figure. The three published spectra of Trojan asteroids (Emery et al. 2006) and of (65) Cybele (Licandro et al. 2011) exhibit clear emissivity features from which the compositional and physical properties can be inferred. The spectra of these objects strongly resemble one another, presenting an emission plateau due to silicates at about 9.1-11.5 microns (the Si-O stretch fundamental). Fine-grained silicates in a very porous (fairly castle) structure, and no other mineral group (Emery et al. 2006, Vernazza et al. 2012), reproduce the major features of the Trojans and Cybele asteroid spectra. In this work, we present the preliminary results of our observational program including the N-band spectra, size, and albedo of the already observed 5 asteroids

  16. One- and two-dimensional infrared spectroscopic studies of solution-phase homogeneous catalysis and spin-forbidden reactions

    SciTech Connect

    Sawyer, Karma Rae

    2008-12-01

    Understanding chemical reactions requires the knowledge of the elementary steps of breaking and making bonds, and often a variety of experimental techniques are needed to achieve this goal. The initial steps occur on the femto- through picosecond time-scales, requiring the use of ultrafast spectroscopic methods, while the rate-limiting steps often occur more slowly, requiring alternative techniques. Ultrafast one and two-dimensional infrared and step-scan FTIR spectroscopies are used to investigate the photochemical reactions of four organometallic complexes. The analysis leads to a detailed understanding of mechanisms that are general in nature and may be applicable to a variety of reactions.

  17. New background correction method for liquid chromatography with diode array detection, infrared spectroscopic detection and Raman spectroscopic detection.

    PubMed

    Boelens, Hans F M; Dijkstra, Reyer J; Eilers, Paul H C; Fitzpatrick, Fiona; Westerhuis, Johan A

    2004-11-19

    A new method to eliminate the background spectrum (EBS) during analyte elution in column liquid chromatography (LC) coupled to spectroscopic techniques is proposed. This method takes into account the shape and also intensity differences of the background eluent spectrum. This allows the EBS method to make a better estimation of the background eluent spectrum during analyte elution. This is an advantage for quantification as well as for identification of analytes. The EBS method uses a two-step procedure. First, the baseline spectra are modeled using a limited number of principal components (PCs). Subsequently, an asymmetric least squares (asLS) regression method is applied using these principal components to correct the measured spectra during elution for the background contribution. The asymmetric least squares regression needs one parameter, the asymmetry factor p. This asymmetry factor determines relative weight of positive and negative residuals. Simulations are performed to test the EBS method in well-defined situations. The effect of spectral noise on the performance and the sensitivity of the EBS method for the value of the asymmetry factorp is tested. Two applications of the EBS method are discussed. In the first application, the goal is to extract the analyte spectrum from an LC-Raman analysis. In this case, the EBS method facilitates easy identification of unknown analytes using spectral libraries. In a second application, the EBS method is used for baseline correction in LC-diode array detection (DAD) analysis of polymeric standards during a gradient elution separation. It is shown that the EBS method yields a good baseline correction, without the need to perform a blank chromatographic run.

  18. Spectroscopic properties in Er(3+)-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials.

    PubMed

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-03-07

    Transparent Er(3+)-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH(-)) content. Enhanced 2.7 μm emission was achieved from Er(3+)-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er(3+)-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10(-20) cm(2)). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers.

  19. Spectroscopic properties in Er3+-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials

    NASA Astrophysics Data System (ADS)

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-03-01

    Transparent Er3+-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH‑) content. Enhanced 2.7 μm emission was achieved from Er3+-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er3+-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10‑20 cm2). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers.

  20. Spectroscopic properties in Er3+-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials

    PubMed Central

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-01-01

    Transparent Er3+-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH−) content. Enhanced 2.7 μm emission was achieved from Er3+-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er3+-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10−20 cm2). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers. PMID:28266570

  1. Near-infrared spectroscopic photoacoustic microscopy using a multi-color fiber laser source

    PubMed Central

    Buma, Takashi; Wilkinson, Benjamin C.; Sheehan, Timothy C.

    2015-01-01

    We demonstrate a simple multi-wavelength optical source suitable for spectroscopic optical resolution photoacoustic microscopy (OR-PAM) of lipid-rich tissue. 1064 nm laser pulses are converted to multiple wavelengths beyond 1300 nm via nonlinear optical propagation in a birefringent optical fiber. OR-PAM experiments with lipid phantoms clearly show the expected absorption peak near 1210 nm. We believe this simple multi-color technique is a promising cost-effective approach to spectroscopic OR-PAM of lipid-rich tissue. PMID:26309746

  2. A Multiwavelength Study of Cygnus X-1: The First Mid-infrared Spectroscopic Detection of Compact Jets

    NASA Astrophysics Data System (ADS)

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Jörn; Grinberg, Victoria

    2011-07-01

    We report on a Spitzer/InfraRed Spectrograph (mid-infrared), RXTE/PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multiwavelength study of the microquasar Cygnus X-1, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break—where the transition from the optically thick to the optically thin regime takes place—at about 2.9 × 1013 Hz. We then show that the jet's optically thin synchrotron emission accounts for Cygnus X-1's emission beyond 400 keV, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 μm mid-infrared continuum of Cygnus X-1 stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Rayleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f ∞ ≈ 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anti-correlation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and Cygnus X-1's environment and/or the companion star's stellar wind.

  3. A MULTIWAVELENGTH STUDY OF CYGNUS X-1: THE FIRST MID-INFRARED SPECTROSCOPIC DETECTION OF COMPACT JETS

    SciTech Connect

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Joern; Grinberg, Victoria E-mail: jclee@cfa.harvard.edu E-mail: hines@stsci.edu E-mail: joern.wilms@sternwarte.uni-erlangen.de

    2011-07-20

    We report on a Spitzer/InfraRed Spectrograph (mid-infrared), RXTE/PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multiwavelength study of the microquasar Cygnus X-1, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break-where the transition from the optically thick to the optically thin regime takes place-at about 2.9 x 10{sup 13} Hz. We then show that the jet's optically thin synchrotron emission accounts for Cygnus X-1's emission beyond 400 keV, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 {mu}m mid-infrared continuum of Cygnus X-1 stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Rayleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f{sub {infinity}} {approx} 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anti-correlation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and Cygnus X-1's environment and/or the companion star's stellar wind.

  4. A Multiwavelength Study of Cygnus X-1: The First Mid-Infrared Spectroscopic Detection of Compact Jets

    NASA Technical Reports Server (NTRS)

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Joern

    2011-01-01

    We report on a Spitzer/IRS (mid-infrared), RXTE /PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multi-wavelength study of the micro quasar Cygnus X-I, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break - where the transition from the optically thick to the optically thin regime takes place - at about 2.9 x 10(exp 13) Hz. We then show that the jet's optically thin synchrotron emission accounts for the Cygnus X-1's emission beyond 400 keY, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 micron mid-infrared continuum of Cygnus X-I stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Raleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f(sub infinity) approx.= 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anticorrelation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and the Cygnus X-1's environment and/or companion star's stellar wind.

  5. High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging of human tissue sections towards improving pathology.

    PubMed

    Sreedhar, Hari; Varma, Vishal K; Nguyen, Peter L; Davidson, Bennett; Akkina, Sanjeev; Guzman, Grace; Setty, Suman; Kajdacsy-Balla, Andre; Walsh, Michael J

    2015-01-21

    High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging is an emerging approach to obtain detailed images that have associated biochemical information. FT-IR imaging of tissue is based on the principle that different regions of the mid-infrared are absorbed by different chemical bonds (e.g., C=O, C-H, N-H) within cells or tissue that can then be related to the presence and composition of biomolecules (e.g., lipids, DNA, glycogen, protein, collagen). In an FT-IR image, every pixel within the image comprises an entire Infrared (IR) spectrum that can give information on the biochemical status of the cells that can then be exploited for cell-type or disease-type classification. In this paper, we show: how to obtain IR images from human tissues using an FT-IR system, how to modify existing instrumentation to allow for high-definition imaging capabilities, and how to visualize FT-IR images. We then present some applications of FT-IR for pathology using the liver and kidney as examples. FT-IR imaging holds exciting applications in providing a novel route to obtain biochemical information from cells and tissue in an entirely label-free non-perturbing route towards giving new insight into biomolecular changes as part of disease processes. Additionally, this biochemical information can potentially allow for objective and automated analysis of certain aspects of disease diagnosis.

  6. Infrared Spectroscopic Evidences of Strong Electronic Correlations in (Sr1−xLax)3Ir2O7

    PubMed Central

    Ahn, Gihyeon; Song, S. J.; Hogan, T.; Wilson, S. D.; Moon, S. J.

    2016-01-01

    We report on infrared spectroscopic studies of the electronic response of the (Sr1−xLax)3Ir2O7 system. Our experiments revealed hallmarks of strong electronic correlations in the evolution of the electronic response across the filling-controlled insulator-metal transition. We observed a collapse of the Jeff = 1/2 Mott gap accompanying the transfer of the spectral weight from the high-energy region to the gap region with electron doping. The intraband conductivity at the metallic side of the transition was found to consist of coherent Drude-like and incoherent responses. The sum rule and the extended Drude model analyses further indicated a large mass enhancement. Our results demonstrate a critical role of the electronic correlations in the charge dynamics of the (Sr1−xLax)3Ir2O7 system. PMID:27599573

  7. Infrared Spectroscopic Data from the Apache Point Observatory Galactic Evolution Experiment (APOGEE), SDSS-III Data Release 10

    DOE Data Explorer

    Sloan Digital Sky Survey (SDSS) Data Release 10 is the first spectroscopic release from the Apache Point Observatory Galactic Evolution Experiment (APOGEE), including spectra and derived stellar parameters for more than 50,000 stars. APOGEE is an ongoing survey of ~100,000 stars accessing all parts of the Milky Way. By operating in the infrared (H-band) portion of the electromagnetic spectrum, APOGEE is better able to detect light from stars lying in dusty regions of the Milky Way than surveys conducted in the optical, making this survey particularly well-suited for exploring the Galactic disk and bulge. APOGEE's high resolution spectra provide detailed information about the stellar atmospheres; DR10 provides derived effective temperatures, surface gravities, overall metallicities, and information on the abundances of several chemical elements. [copied from http://www.sdss3.org/dr10/irspec/

  8. Ab initio molecular orbital and infrared spectroscopic study of the conformation of secondary amides: derivatives of formanilide, acetanilide and benzylamides

    NASA Astrophysics Data System (ADS)

    Ilieva, S.; Hadjieva, B.; Galabov, B.

    1999-09-01

    Ab initio molecular orbital calculations at HF/4-31G level and infrared spectroscopic data for the frequencies are applied to analyse the grouping in a series model aromatic secondary amides: formanilide; acetanilide; o-methylacetanilide; 2,6-dimethylformanilide, 2,6-dimethylacetanilide; N-benzylacetamide and N-benzylformamide. The theoretical and experimental data obtained show that the conformational state of the molecules studied is determined by the fine balance of several intramolecular factors: resonance effect between the amide group and the aromatic ring, steric interaction between various substituents around the -NH-CO- grouping in the aromatic ring, conjugation between the carbonyl bond and the nitrogen lone pair as well as direct field influences inside the amide group.

  9. Near Infrared photometric and spectroscopic observations of the bright optical transient J212444.87+321738.3

    NASA Astrophysics Data System (ADS)

    Mondal, Soumen; Das, Ramkrishna; Ashok, N. M.; Banerjee, D. P. K.; Dutta, Somnath; Ghosh, Supriyo; Mondal, Anindita

    2013-04-01

    We report near infrared JHK-band photometry and spectroscopic observations of the recently reported bright optical transient J212444.87+321738.3 using the Near-IR Imager cum spectrograph (NICMOS-3) installed on the Mount Abu 1.2-m telescope of the Physical Research Laboratory, India following the outburst announcement by Tiurina et al. in ATel #4888. The photometric observations were carried out on 2013 March 21.020 UT and 23.010 UT yielding magnitudes of J = 5.85 +/- 0.06, H = 4.47 +/- 0.06, K = 3.77 +/- 0.05; and J= 5.64 +/- 0.04, H= 4.48 +/- 0.04, K = 3.77 +/- 0.03 respectively.

  10. Widely tunable (PbSn)Te lasers using etched cavities for mass production. [for infrared spectroscopic applications

    NASA Technical Reports Server (NTRS)

    Miller, M. D.

    1980-01-01

    Lead salt diode lasers are being used increasingly as tunable sources of monochromatic infrared radiation in a variety of spectroscopic systems. These devices are particularly useful, both in the laboratory and in the field, because of their high spectral brightness (compared to thermal sources) and wide spectral coverage (compared to line-tunable gas lasers). While the primary commercial application of these lasers has been for ultrahigh resolution laboratory spectroscopy, there are numerous systems applications, including laser absorbtion pollution monitors and laser heterodyne radiometers, for which diode lasers have great potential utility. Problem areas related to the wider use of these components are identified. Among these are total tuning range, mode control, and high fabrication cost. A fabrication technique which specifically addresses the problems of tuning range and cost, and which also has potential application for mode control, is reported.

  11. The water vapour continuum in near-infrared windows - Current understanding and prospects for its inclusion in spectroscopic databases

    NASA Astrophysics Data System (ADS)

    Shine, Keith P.; Campargue, Alain; Mondelain, Didier; McPheat, Robert A.; Ptashnik, Igor V.; Weidmann, Damien

    2016-09-01

    Spectroscopic catalogues, such as GEISA and HITRAN, do not yet include information on the water vapour continuum that pervades visible, infrared and microwave spectral regions. This is partly because, in some spectral regions, there are rather few laboratory measurements in conditions close to those in the Earth's atmosphere; hence understanding of the characteristics of the continuum absorption is still emerging. This is particularly so in the near-infrared and visible, where there has been renewed interest and activity in recent years. In this paper we present a critical review focusing on recent laboratory measurements in two near-infrared window regions (centred on 4700 and 6300 cm-1) and include reference to the window centred on 2600 cm-1 where more measurements have been reported. The rather few available measurements, have used Fourier transform spectroscopy (FTS), cavity ring down spectroscopy, optical-feedback - cavity enhanced laser spectroscopy and, in very narrow regions, calorimetric interferometry. These systems have different advantages and disadvantages. Fourier Transform Spectroscopy can measure the continuum across both these and neighbouring windows; by contrast, the cavity laser techniques are limited to fewer wavenumbers, but have a much higher inherent sensitivity. The available results present a diverse view of the characteristics of continuum absorption, with differences in continuum strength exceeding a factor of 10 in the cores of these windows. In individual windows, the temperature dependence of the water vapour self-continuum differs significantly in the few sets of measurements that allow an analysis. The available data also indicate that the temperature dependence differs significantly between different near-infrared windows. These pioneering measurements provide an impetus for further measurements. Improvements and/or extensions in existing techniques would aid progress to a full characterisation of the continuum - as an example, we

  12. Preliminary evaluation of hydrocarbon removal power of Caulerpa racemosa in seawater by means of infrared and visible spectroscopic measurements.

    PubMed

    Pietroletti, Marco; Capobianchi, Alfredo; Ragosta, Emanuela; Mecozzi, Mauro

    2010-10-15

    In this paper we tested the power of Caulerpa racemosa for removal hydrocarbons from seawater. C. racemosa was implanted in two aquariums filled with natural seawater having a hydrocarbon content lower than 0.05mg/L which is the detection limit of the FTIR spectrophotometric method used for the determination. One aquarium was submitted to sequential additions of hydrocarbons (n-esadecane 10, 20 and 40mg/L, n-docosane 15mg/L) and diesel fuels (20mg/L) while the second one remained uncontaminated and used as control. After any addition, hydrocarbon content in seawater was determined at regular time intervals (one or two days) and when comparable hydrocarbon contents (i.e. lower than 0.05mg/L) were again observed, the real removal power of hydrocarbons was verified by several spectroscopic measurements performed on algae from both aquariums. Total hydrocarbon contents in algae determined by infrared (FTIR) spectroscopy, always resulted higher in the polluted aquarium for all the concentrations of added pollutants. Further FTIR studies performed on algae showed the presence of marked quantitative and structural molecular modifications involving carbohydrates, proteins, lipids, nucleic acids and chlorophyll pigments in C. racemosa from the aquarium test. In addition, visible (VIS) spectroscopic examination of C. racemosa showed a reduction of chlorophyll pigments in the polluted aquarium with respect to the control one. At last, FTIR spectra all the algal samples submitted to hydrocarbon pollution were re-examined by means of two-dimensional correlation analysis, a statistical tool helpful for studying the dynamic evolution of any molecular and biological system submitted to an external perturbation producing compositional and structural changes. This approach showed differences among the molecular modifications caused by any type of hydrocarbon used, modifications related reasonably to the molecular dimensions and concentration of the added pollutants. All these

  13. Preliminary evaluation of hydrocarbon removal power of Caulerpa racemosa in seawater by means of infrared and visible spectroscopic measurements

    NASA Astrophysics Data System (ADS)

    Pietroletti, Marco; Capobianchi, Alfredo; Ragosta, Emanuela; Mecozzi, Mauro

    2010-10-01

    In this paper we tested the power of Caulerpa racemosa for removal hydrocarbons from seawater. C. racemosa was implanted in two aquariums filled with natural seawater having a hydrocarbon content lower than 0.05 mg/L which is the detection limit of the FTIR spectrophotometric method used for the determination. One aquarium was submitted to sequential additions of hydrocarbons (n-esadecane 10, 20 and 40 mg/L, n-docosane 15 mg/L) and diesel fuels (20 mg/L) while the second one remained uncontaminated and used as control. After any addition, hydrocarbon content in seawater was determined at regular time intervals (one or two days) and when comparable hydrocarbon contents (i.e. lower than 0.05 mg/L) were again observed, the real removal power of hydrocarbons was verified by several spectroscopic measurements performed on algae from both aquariums. Total hydrocarbon contents in algae determined by infrared (FTIR) spectroscopy, always resulted higher in the polluted aquarium for all the concentrations of added pollutants. Further FTIR studies performed on algae showed the presence of marked quantitative and structural molecular modifications involving carbohydrates, proteins, lipids, nucleic acids and chlorophyll pigments in C. racemosa from the aquarium test. In addition, visible (VIS) spectroscopic examination of C. racemosa showed a reduction of chlorophyll pigments in the polluted aquarium with respect to the control one. At last, FTIR spectra all the algal samples submitted to hydrocarbon pollution were re-examined by means of two-dimensional correlation analysis, a statistical tool helpful for studying the dynamic evolution of any molecular and biological system submitted to an external perturbation producing compositional and structural changes. This approach showed differences among the molecular modifications caused by any type of hydrocarbon used, modifications related reasonably to the molecular dimensions and concentration of the added pollutants. All these

  14. Near-Infrared Spectroscopic Investigation of Neptune's Hazes and Storms at the Keck Telescope

    NASA Astrophysics Data System (ADS)

    Roe, H.; Graham, J. R.; de Pater, I.; Gibbard, S.; Macintosh, B.; Max, C.; Baines, K.; Gilbert, A. M.; McLean, I. S.; Becklin, E. E.; Figer, D. F.; Larkin, J. E.; Levenson, N. A.; Teplitz, H. I.; Wilcox, M. K.; NIRSPEC Team

    1999-09-01

    We present observations of Neptune in the near-infrared (1-5 mu m) obtained with the newly commissioned Near-Infrared Spectrometer (NIRSPEC) at the 10-m W.M. Keck Telescope. The infrared spectrum of Neptune is useful for determining the structure and nature of haze layers and bright 'storm' features in the stratosphere and upper troposphere. Significant variations in atmospheric opacity due to methane and H_2 pressure-induced absorption as a function of wavelength allow selective probing of the atmosphere to different depths. Most infrared filters used in imaging cover too wide a spectral range to precisely determine the vertical distribution of hazes and 'storm' particles. Our observations provide both the spatial resolution necessary to separate infrared bright 'storm' features from Neptune's background hazy atmosphere as well as the spectral resolution (R=2000 low-resolution mode, R=25000 high-resolution mode) to selectively probe the atmosphere as a function of altitude. We compare our observed spectra with radiative transfer models to derive haze and 'storm' particle number density and their vertical distribution.

  15. Mid-infrared spectroscopic measurement of ionic dissociative materials in the metabolic pathway.

    PubMed

    Nakanishi, Kenichi; Hashimoto, Atsushi; Pan, Tao; Kanou, Mikihito; Kameoka, Takaharu

    2003-12-01

    We determine the pH dependency of the mid-infrared spectra in aqueous solution of the organic dissociative materials in the metabolic pathway: saccharide phosphates (G6P, F6P), adenosine, and its phosphates (ATP, ADP, AMP). The series of molar absorbance spectra for these reagents were obtained in a pH range of about 2 to 11 with a Fourier transform infrared (FT-IR) spectrometer equipped with a horizontal diamond attenuated total reflection (ATR) sampling accessory. We also provide a method of infrared spectral extraction of ionic dissociative materials by performing a linear least-square fitting utilizing the formulas of ionic dissociation equilibrium shift, and we obtain the infrared spectrum of each ionic species of the dissociative materials: G6P-, G6P2-; F6P-, F6P2-; ATP2-, ATP3-, ATP4-; ADP-, ADP2-, ADP3-; AMP, AMP-, AMP2-; and adenosine+, adenosine0. The infrared spectral structure of each ionic species of the dissociative materials in the metabolic pathway are discussed. Additionally, the possibility for a quantification system of the concentrations of the organic dissociative materials in varying pH is suggested.

  16. Analysis of Molecular Contamination on Genesis Collectors Through Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    McNamara, K. M.; Stansbery, Eileen K.

    2005-01-01

    Before the spacecraft returned to Earth in September, the Genesis mission had a preliminary assessment plan in place for the purpose of providing information on the condition and availability of collector materials to the science community as a basis for allocation requests. One important component of that plan was the evaluation of collector surfaces for molecular contamination. Sources of molecular contamination might be the on-orbit outgassing of spacecraft and science canister components, the condensation of thruster by-products during spacecraft maneuvers, or the condensation of volatile species associated with reentry. Although the non-nominal return of the Genesis spacecraft introduced particulate contamination to the collectors, such as dust and heatshield carbon-carbon, it is unlikely to have caused any molecular deposition. The contingency team's quick action in returning the damaged payload the UTTR cleanroom by 6 PM the evening of recovery help to ensure that exposure to weather conditions and the environment were kept to a minimum.

  17. Infrared LED Enhanced Spectroscopic CdZnTe Detector Working under High Fluxes of X-rays

    PubMed Central

    Pekárek, Jakub; Dědič, Václav; Franc, Jan; Belas, Eduard; Rejhon, Martin; Moravec, Pavel; Touš, Jan; Voltr, Josef

    2016-01-01

    This paper describes an application of infrared light-induced de-polarization applied on a polarized CdZnTe detector working under high radiation fluxes. We newly demonstrate the influence of a high flux of X-rays and simultaneous 1200-nm LED illumination on the spectroscopic properties of a CdZnTe detector. CdZnTe detectors operating under high radiation fluxes usually suffer from the polarization effect, which occurs due to a screening of the internal electric field by a positive space charge caused by photogenerated holes trapped at a deep level. Polarization results in the degradation of detector charge collection efficiency. We studied the spectroscopic behavior of CdZnTe under various X-ray fluxes ranging between 5×105 and 8×106 photons per mm2 per second. It was observed that polarization occurs at an X-ray flux higher than 3×106 mm−2·s−1. Using simultaneous illumination of the detector by a de-polarizing LED at 1200 nm, it was possible to recover X-ray spectra originally deformed by the polarization effect. PMID:27690024

  18. Infrared LED Enhanced Spectroscopic CdZnTe Detector Working under High Fluxes of X-rays.

    PubMed

    Pekárek, Jakub; Dědič, Václav; Franc, Jan; Belas, Eduard; Rejhon, Martin; Moravec, Pavel; Touš, Jan; Voltr, Josef

    2016-09-27

    This paper describes an application of infrared light-induced de-polarization applied on a polarized CdZnTe detector working under high radiation fluxes. We newly demonstrate the influence of a high flux of X-rays and simultaneous 1200-nm LED illumination on the spectroscopic properties of a CdZnTe detector. CdZnTe detectors operating under high radiation fluxes usually suffer from the polarization effect, which occurs due to a screening of the internal electric field by a positive space charge caused by photogenerated holes trapped at a deep level. Polarization results in the degradation of detector charge collection efficiency. We studied the spectroscopic behavior of CdZnTe under various X-ray fluxes ranging between 5 × 10 5 and 8 × 10 6 photons per mm 2 per second. It was observed that polarization occurs at an X-ray flux higher than 3 × 10 6 mm - 2 ·s - 1 . Using simultaneous illumination of the detector by a de-polarizing LED at 1200 nm, it was possible to recover X-ray spectra originally deformed by the polarization effect.

  19. A four class model for digital breast histopathology using high-definition Fourier transform infrared (FT-IR) spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Mittal, Shachi; Wrobel, Tomasz P.; Leslie, L. S.; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2016-03-01

    High-definition (HD) Fourier transform infrared (FT-IR) spectroscopic imaging is an emerging technique that not only enables chemistry-based visualization of tissue constituents, and label free extraction of biochemical information but its higher spatial detail makes it a potentially useful platform to conduct digital pathology. This methodology, along with fast and efficient data analysis, can enable both quantitative and automated pathology. Here we demonstrate a combination of HD FT-IR spectroscopic imaging of breast tissue microarrays (TMAs) with data analysis algorithms to perform histologic analysis. The samples comprise four tissue states, namely hyperplasia, dysplasia, cancerous and normal. We identify various cell types which would act as biomarkers for breast cancer detection and differentiate between them using statistical pattern recognition tools i.e. Random Forest (RF) and Bayesian algorithms. Feature optimization is integrally carried out for the RF algorithm, reducing computation time as well as redundant spectral features. We achieved an order of magnitude reduction in the number of features with comparable prediction accuracy to that of the original feature set. Together, the demonstration of histology and selection of features paves the way for future applications in more complex models and rapid data acquisition.

  20. FAR-IR/SUBMILLIMETER SPECTROSCOPIC COSMOLOGICAL SURVEYS: PREDICTIONS OF INFRARED LINE LUMINOSITY FUNCTIONS FOR z < 4 GALAXIES

    SciTech Connect

    Spinoglio, Luigi; Dasyra, Kalliopi M.; Gruppioni, Carlotta; Valiante, Elisabetta; Isaak, Kate

    2012-02-01

    Star formation and accretion onto supermassive black holes in the nuclei of galaxies are the two most energetic processes in the universe, producing the bulk of the observed emission throughout its history. We simulated the luminosity functions of star-forming and active galaxies for spectral lines that are thought to be good spectroscopic tracers of either phenomenon, as a function of redshift. We focused on the infrared (IR) and submillimeter domains, where the effects of dust obscuration are minimal. Using three different and independent theoretical models for galaxy formation and evolution, constrained by multi-wavelength luminosity functions, we computed the number of star-forming and active galaxies per IR luminosity and redshift bin. We converted the continuum luminosity counts into spectral line counts using relationships that we calibrated on mid- and far-IR spectroscopic surveys of galaxies in the local universe. Our results demonstrate that future facilities optimized for survey-mode observations, i.e., the Space Infrared telescope for Cosmology and Astrophysics and the Cerro Chajnantor Atacama Telescope, will be able to observe thousands of z > 1 galaxies in key fine-structure lines, e.g., [Si II], [O I], [O III], [C II], in a half-square-degree survey, with 1 hr integration time per field of view. Fainter lines such as [O IV], [Ne V], and H{sub 2} (0-0)S1 will be observed in several tens of bright galaxies at 1 < z < 2, while diagnostic diagrams of active nucleus versus star formation activity will be feasible even for normal z {approx} 1 galaxies. We discuss the new parameter space that these future telescopes will cover and that strongly motivates their construction.

  1. Development of Single-Seed Near-Infrared Spectroscopic Predictions of Corn and Soybeans Constituents Using Bulk Teference Values and Mean Spectra

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Near-Infrared reflectance spectroscopic prediction models were developed for common constituents of corn and soybeans using bulk reference values and mean spectra from single-seeds. The bulk reference model and a true single-seed model for soybean protein were compared to determine how well the bul...

  2. Design and spectroscopic characterization of novel series of near infrared indocyanine dyes

    NASA Astrophysics Data System (ADS)

    Abd-El-Aziz, Alaa S.; Strohm, Elizabeth A.; Okasha, Rawda M.

    2015-07-01

    A novel series of near infrared heptamethine indocyanine dyes bearing various aromatic chromophores has been synthesized. The synthetic methodology was achieved via ester condensation reactions of heptamethine indocyanine parent dye with carboxylic moiety and aromatic compounds such as anthracene, pyrene and thiophene derivatives. Structural analysis of the newly prepared dyes was accomplished using one- and two-dimensional nuclear magnetic resonance, infrared spectroscopy and electrospray ionization mass spectrometry. These dyes exhibited high molar absorptivity based on the UV-visible/near-infrared spectral data. Fluorescence emission spectral data was used to determine the relative quantum yield. The new dyes displayed formation of H-aggregates in water at low concentrations, while this behavior was not observed in methanol.

  3. Microsampling techniques for infrared spectroscopic analysis of lunar and terrestrial minerals

    NASA Technical Reports Server (NTRS)

    Estep, P. A.; Kovach, J. J.; Karr, C.

    1973-01-01

    Microsampling techniques have been developed for infrared analysis of single mineral grains from lunar rocks and dusts, allowing a detailed molecular structure characterization of these complex fine-grained samples. The methods include special devices for isolating single grains, preparing micropellets from the grains, and obtaining in situ microspecular reflectance spectra from grains in polished rock samples. Although specifically developed for the work on lunar samples, the special techniques for single grain infrared analysis were found to be equally useful in studies of complex terrestrial mineral samples. For example, infrared microanalysis has contributed substantially in solving problems concerned with our natural resources, such as the structural characterization of minerals from commercial iron ores, marine deposits, coal, and fly ash derived from coal.

  4. A time-resolved infrared vibrational spectroscopic study of the photo-dynamics of crystalline materials.

    PubMed

    Towrie, Mike; Parker, Anthony W; Ronayne, Kate L; Bowes, Katharine F; Cole, Jacqueline M; Raithby, Paul R; Warren, John E

    2009-01-01

    Time-resolved infrared vibrational spectroscopy is a structurally sensitive probe of the excited-state properties of matter. The technique has found many applications in the study of molecules in dilute solution phase but has rarely been applied to crystalline samples. We report on the use of a sensitive pump-probe time-resolved infrared spectrometer and sample handling techniques for studies of the ultrafast excited-state dynamics of crystalline materials. The charge transfer excited states of crystalline metal carbonyls and the proton transfer of dihydroxyquinones are presented and compared with the solution phase.

  5. Do Infants Recognize the Arcimboldo Images as Faces? Behavioral and Near-Infrared Spectroscopic Study

    ERIC Educational Resources Information Center

    Kobayashi, Megumi; Otsuka, Yumiko; Nakato, Emi; Kanazawa, So; Yamaguchi, Masami K.; Kakigi, Ryusuke

    2012-01-01

    Arcimboldo images induce the perception of faces when shown upright despite the fact that only nonfacial objects such as vegetables and fruits are painted. In the current study, we examined whether infants recognize a face in the Arcimboldo images by using the preferential looking technique and near-infrared spectroscopy (NIRS). In the first…

  6. Infrared spectroscopic studies of dimethylglyoxime chelates of nickel, cobalt, copper, palladium and platinum

    NASA Astrophysics Data System (ADS)

    Panja, Prabhat K.; Bala, Sibsankar; Pal, Chadramadhab; Ghosh, Pradip N.

    1991-09-01

    Infrared spectra of dimethylglyoxime chelates of nickel, cobalt, copper, palladium and platinum are measured in the range 4000-200 cm -1. The shifts of the OH stretching frequencies caused by chelation provide information on hydrogen bonding. The frequency shifts and hydrogen bond distances are calculated from the Lippincott—Schroeder potential using X-ray crystallographic data and compared with the observed values.

  7. Matrix isolation infrared spectroscopic and theoretical study of 1,1,1-trifluoro-2-chloroethane (HCFC-133a)

    SciTech Connect

    Rodrigues, Gessenildo Pereira; Ventura, Elizete E-mail: rfausto@ci.uc.pt; Andrade do Monte, Silmar; Lucena, Juracy Régis; Reva, Igor; Fausto, Rui E-mail: rfausto@ci.uc.pt

    2013-11-28

    The molecular structure and infrared spectrum of the atmospheric pollutant 1,1,1-trifluoro-2-chloroethane (HCFC-133a; CF{sub 3}CH{sub 2}Cl) in the ground electronic state were characterized experimentally and theoretically. Excited state calculations (at the CASSCF, MR-CISD, and MR-CISD+Q levels) have also been performed in the range up to ∼9.8 eV. The theoretical calculations show the existence of one (staggered) conformer, which has been identified spectroscopically for the monomeric compound isolated in cryogenic (∼10 K) argon and xenon matrices. The observed infrared spectra of the matrix-isolated HCFC-133a were interpreted with the aid of MP2/aug-cc-pVTZ calculations and normal coordinate analysis, which allowed a detailed assignment of the observed spectra to be carried out, including identification of bands due to different isotopologues ({sup 35}Cl and {sup 37}Cl containing molecules). The calculated energies of the several excited states along with the values of oscillator strengths and previous results obtained for CFCs and HCFCs suggest that the previously reported photolyses of the title compound at 147 and 123.6 nm [T. Ichimura, A. W. Kirk, and E. Tschuikow-Roux, J. Phys. Chem. 81, 1153 (1977)] are likely to be initiated in the n-4s and n-4p Rydberg states, respectively.

  8. Infrared and UV-visible spectroscopic studies of gamma-irradiated Sb2O3-B2O3 glasses

    NASA Astrophysics Data System (ADS)

    Marzouk, Samir Y.; Elbatal, Fatma H.

    2014-04-01

    Glasses from the binary Sb2O3-B2O3 system were prepared in the compositional range 90-30 Sb2O3 mol%. UV-visible spectroscopic measurements were carried out in the range 190-1100 nm before and after successive gamma rays irradiation (1, 3, 4 Mrad). Infrared absorption of the samples was measured by the KBr technique in the range 4000-400 cm-1 and the same measurements were repeated after gamma irradiation with 4 kGy. Experimental results indicate that antimony borate glasses reveal quite shielding behavior towards gamma rays irradiation as observed with heavy metal cations bearing glasses such as Bi3+ and Pb2+. Infrared absorption spectra reveal characteristic absorption bands specific for the glass-forming borate units and Sb-O units. Glasses containing high antimony oxide content can thus be recommended as promising radiation-shielding material because they show resistant to gamma irradiation due to the presence of high percent of heavy metal oxide (Sb2O3).

  9. Sculpting narrowband Fano resonances inherent in the large-area mid-infrared photonic crystal microresonators for spectroscopic imaging

    PubMed Central

    Liu, Jui-Nung; Schulmerich, Matthew V.; Bhargava, Rohit; Cunningham, Brian T.

    2014-01-01

    Fourier transform infrared (FT-IR) imaging spectrometers are almost universally used to record microspectroscopic imaging data in the mid-infrared (mid-IR) spectral region. While the commercial standard, interferometry necessitates collection of large spectral regions, requires a large data handling overhead for microscopic imaging and is slow. Here we demonstrate an approach for mid-IR spectroscopic imaging at selected discrete wavelengths using narrowband resonant filtering of a broadband thermal source, enabled by high-performance guided-mode Fano resonances in one-layer, large-area mid-IR photonic crystals on a glass substrate. The microresonant devices enable discrete frequency IR (DF-IR), in which a limited number of wavelengths that are of interest are recorded using a mechanically robust instrument. This considerably simplifies instrumentation as well as overhead of data acquisition, storage and analysis for large format imaging with array detectors. To demonstrate the approach, we perform DF-IR spectral imaging of a polymer USAF resolution target and human tissue in the C−H stretching region (2600−3300 cm−1). DF-IR spectroscopy and imaging can be generalized to other IR spectral regions and can serve as an analytical tool for environmental and biomedical applications. PMID:25089433

  10. Evaluating the health of compromised tissues using a near-infrared spectroscopic imaging system in clinical settings: lessons learned

    NASA Astrophysics Data System (ADS)

    Leonardi, Lorenzo; Sowa, Michael G.; Hewko, Mark D.; Schattka, Bernhard J.; Payette, Jeri R.; Hastings, Michelle; Posthumus, Trevor B.; Mantsch, Henry H.

    2003-07-01

    The present and accepted standard for determining the status of tissue relies on visual inspection of the tissue. Based on the surface appearance of the tissue, medical personnel will make an assessment of the tissue and proceed to a course of action or treatment. Visual inspection of tissue is central to many areas of clinical medicine, and remains a cornerstone of dermatology, reconstructive plastic surgery, and in the management of chronic wounds, and burn injuries. Near infrared spectroscopic imaging holds the promise of being able to monitor the dynamics of tissue physiology in real-time and detect pathology in living tissue. The continuous measurement of metabolic, physiological, or structural changes in tissue is of primary concern in many clinical and biomedical domains. A near infrared hyperspectral imaging system was constructed for the assessment of burn injuries and skin flaps or skin grafts. This device merged basic science with engineering and integrated manufacturing to develop a device suitable to detect ischemic tissue. This device has the potential of providing measures of tissue physiology, oxygen delivery and tissue hydration during patient screening, in the operating room or during therapy and post-operative/treatment monitoring. Results from a pre-clinical burn injury study will be presented.

  11. Spectroscopic investigation on cocrystal formation between adenine and fumaric acid based on infrared and Raman techniques.

    PubMed

    Du, Yong; Fang, Hong Xia; Zhang, Qi; Zhang, Hui Li; Hong, Zhi

    2016-01-15

    As an important component of double-stranded DNA, adenine has powerful hydrogen-bond capability, due to rich hydrogen bond donors and acceptors existing within its molecular structure. Therefore, it is easy to form cocrystal between adenine and other small molecules with intermolecular hydrogen-bond effect. In this work, cocrystal of adenine and fumaric acid has been characterized as model system by FT-IR and FT-Raman spectral techniques. The experimental results show that the cocrystal formed between adenine and fumaric acid possesses unique spectroscopical characteristic compared with that of starting materials. Density functional theory (DFT) calculation has been performed to optimize the molecular structures and simulate vibrational modes of adenine, fumaric acid and the corresponding cocrystal. Combining the theoretical and experimental vibrational results, the characteristic bands corresponding to bending and stretching vibrations of amino and carbonyl groups within cocrystal are shifted into lower frequencies upon cocrystal formation, and the corresponding bond lengths show some increase due to the effect of intermolecular hydrogen bonding. Different vibrational modes shown in the experimental spectra have been assigned based on the simulation DFT results. The study could provide experimental and theoretical benchmarks to characterize cocrystal formed between active ingredients and cocrystal formers and also the intermolecular hydrogen-bond effect within cocrystal formation process by vibrational spectroscopic techniques.

  12. Spectroscopic investigation on cocrystal formation between adenine and fumaric acid based on infrared and Raman techniques

    NASA Astrophysics Data System (ADS)

    Du, Yong; Fang, Hong Xia; Zhang, Qi; Zhang, Hui Li; Hong, Zhi

    2016-01-01

    As an important component of double-stranded DNA, adenine has powerful hydrogen-bond capability, due to rich hydrogen bond donors and acceptors existing within its molecular structure. Therefore, it is easy to form cocrystal between adenine and other small molecules with intermolecular hydrogen-bond effect. In this work, cocrystal of adenine and fumaric acid has been characterized as model system by FT-IR and FT-Raman spectral techniques. The experimental results show that the cocrystal formed between adenine and fumaric acid possesses unique spectroscopical characteristic compared with that of starting materials. Density functional theory (DFT) calculation has been performed to optimize the molecular structures and simulate vibrational modes of adenine, fumaric acid and the corresponding cocrystal. Combining the theoretical and experimental vibrational results, the characteristic bands corresponding to bending and stretching vibrations of amino and carbonyl groups within cocrystal are shifted into lower frequencies upon cocrystal formation, and the corresponding bond lengths show some increase due to the effect of intermolecular hydrogen bonding. Different vibrational modes shown in the experimental spectra have been assigned based on the simulation DFT results. The study could provide experimental and theoretical benchmarks to characterize cocrystal formed between active ingredients and cocrystal formers and also the intermolecular hydrogen-bond effect within cocrystal formation process by vibrational spectroscopic techniques.

  13. Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopic analysis of regenerated bone

    NASA Astrophysics Data System (ADS)

    Benetti, Carolina; Kazarain, Sergei G.; Alves, Marco A. V.; Blay, Alberto; Correa, Luciana; Zezell, Denise M.

    2014-03-01

    The cutting of bone is routinely required in medical procedures, especially in dental applications. In such cases, bone regeneration and new bone quality can determine the success of the treatment. This study investigated the main spectral differences of undamaged and healed bone using the ATR-FTIR spectroscopy technique. Three rabbits were submitted to a surgical procedure; a small piece of bone (3x3 mm2) was removed from both sides of their jaws using a high speed drill. After 15 days, the rabbits were euthanized and the jaws were removed. A bone slice was cut from each side of the jaw containing regions of undamaged and newly formed bone, resulting in six samples which were polished for spectroscopic comparison. The samples were analyzed by FTIR spectroscopy using a diamond ATR accessory. Spectral characteristics were compared and particular attention was paid to the proportion of phosphate to amide I bands and the width of the phosphate band. The results show that the ratio of phosphate to amide I is smaller in new bone tissue than in the undamaged bone, indicating a higher organic content in the newly formed bone. The analysis of the width of the phosphate band suggests a crystallinity difference between both tissues, since the width was higher in the new bone than in the natural bone. These results suggest that the differences observed in bone aging processes by FTIR spectroscopic can be applied to the study of healing processes.

  14. Calibration transfer in Fourier transform infrared remote sensing and in the near-infrared spectroscopic determination of clinical analytes

    NASA Astrophysics Data System (ADS)

    Koehler, Frederick William

    Of the many instrumental technologies provided by analytical chemistry, the chemical selectivity, sensitivity, and flexibility provided by Fourier transform infrared (FT-IR) spectrometry makes it a common choice in broad classes of applications requiring a fast, non-destructive sensing technique. Arising as a practical technology after the arrival of computers, the analysis of the complex digitized chemical information provided by FT-IR spectrometry remains intimately intertwined with computer-based techniques, beginning with the Fast Fourier Transform itself. Like many other modern analytical methods, FT-IR spectrometry is capable of producing tremendous quantities of data that often require complex analysis techniques. These techniques attempt to leverage data into information that can be used to make practical decisions. Techniques discussed in this work in the computer-based analysis of FT-IR data include digital signal processing, digital filtering, pattern recognition, multivariate calibration, and optimization. Whether in the automated qualitative determination of air pollutants in industrial stack monitoring, or a highly sensitive quantitative determination of clinical analytes, when applied to FT-IR data, these data analysis techniques seek the suppression of interfering signals and the extraction of analyte information, allowing these important applications to be realized. Techniques applied to FT-IR data are becoming more powerful in extracting the maximum amount of chemical information from the instrumental signal. Often, however, signals not related to the analyte such as background features, temperature information, and spectrometer-specific information become included in the multivariate models used in qualitative or quantitative prediction. These interferences can represent orders of magnitude more variation in the FT-IR data than the changes in the signal arising from the analytes of interest. If the model includes any of these kinds of information

  15. Infrared spectroscopic study on lattice dynamics in CaFeO3

    NASA Astrophysics Data System (ADS)

    Zhang, C. X.; Xia, H. L.; Liu, H.; Dai, Y. M.; Xu, B.; Yang, R.; Qiu, Z. Y.; Sui, Q. T.; Long, Y. W.; Meng, S.; Qiu, X. G.

    2017-02-01

    The change of the lattice dynamics upon the charge disproportionation (CD) transition has been investigated for the CaFeO3 crystal by measuring its infrared optical spectra. Across the CD transition, CaFeO3 undergoes a metal-insulator transition, and it is found that below TC D≈ 290 K the low-frequency optical conductivity gradually decreases to a rather low value and is dominated by a series of infrared-active phonons. Intriguingly, accompanied by the CD transition, two prominent phonon modes at ˜243 and ˜559 cm-1associated with the vibrations of Fe-O bonds show obvious redshift and asymmetric line shapes characterized by a Fano profile, suggesting a strong electron-phonon coupling. This coupling behavior reveals an intimate relationship between charge and lattice in the CD transition of CaFeO3.

  16. Infrared-faint radio sources are at high redshifts. Spectroscopic redshift determination of infrared-faint radio sources using the Very Large Telescope

    NASA Astrophysics Data System (ADS)

    Herzog, A.; Middelberg, E.; Norris, R. P.; Sharp, R.; Spitler, L. R.; Parker, Q. A.

    2014-07-01

    Context. Infrared-faint radio sources (IFRS) are characterised by relatively high radio flux densities and associated faint or even absent infrared and optical counterparts. The resulting extremely high radio-to-infrared flux density ratios up to several thousands were previously known only for high-redshift radio galaxies (HzRGs), suggesting a link between the two classes of object. However, the optical and infrared faintness of IFRS makes their study difficult. Prior to this work, no redshift was known for any IFRS in the Australia Telescope Large Area Survey (ATLAS) fields which would help to put IFRS in the context of other classes of object, especially of HzRGs. Aims: This work aims at measuring the first redshifts of IFRS in the ATLAS fields. Furthermore, we test the hypothesis that IFRS are similar to HzRGs, that they are higher-redshift or dust-obscured versions of these massive galaxies. Methods: A sample of IFRS was spectroscopically observed using the Focal Reducer and Low Dispersion Spectrograph 2 (FORS2) at the Very Large Telescope (VLT). The data were calibrated based on the Image Reduction and Analysis Facility (IRAF) and redshifts extracted from the final spectra, where possible. This information was then used to calculate rest-frame luminosities, and to perform the first spectral energy distribution modelling of IFRS based on redshifts. Results: We found redshifts of 1.84, 2.13, and 2.76, for three IFRS, confirming the suggested high-redshift character of this class of object. These redshifts and the resulting luminosities show IFRS to be similar to HzRGs, supporting our hypothesis. We found further evidence that fainter IFRS are at even higher redshifts. Conclusions: Considering the similarities between IFRS and HzRGs substantiated in this work, the detection of IFRS, which have a significantly higher sky density than HzRGs, increases the number of active galactic nuclei in the early universe and adds to the problems of explaining the formation of

  17. Matrix Infrared Spectroscopic and Computational Investigations of Novel Small Uranium Containing Molecules - Final Technical Report

    SciTech Connect

    Andrews, Lester

    2014-10-17

    Direct reactions of f-element uranium, thorium and lanthanide metal atoms were investigated with small molecules. These metal atoms were generated by laser ablation and mixed with the reagent molecules then condensed with noble gases at 4K. The products were analyzed by absorption of infrared light to measure vibrational frequencies which were confirmed by quantum chemical calculations. We have learned more about the reactivity of uranium atoms with common molecules, which will aid in the develolpment of further applications of uranium.

  18. [A review of mixed gas detection system based on infrared spectroscopic technique].

    PubMed

    Dang, Jing-Min; Fu, Li; Yan, Zi-Hui; Zheng, Chuan-Tao; Chang, Yu-Chun; Chen, Chen; Wang, Yi-Din

    2014-10-01

    In order to provide the experiences and references to the researchers who are working on infrared (IR) mixed gas detection field. The proposed manuscript reviews two sections of the aforementioned field, including optical multiplexing structure and detection method. At present, the coherent light sources whose representative are quantum cascade laser (QCL) and inter-band cascade laser(ICL) become the mainstream light source in IR mixed gas detection, which replace the traditional non-coherent light source, such as IR radiation source and IR light emitting diode. In addition, the photon detector which has a super high detectivity and very short response time is gradually beyond thermal infrared detector, dominant in the field of infrared detector. The optical multiplexing structure is the key factor of IR mixed gas detection system, which consists of single light source multi-plexing detection structure and multi light source multiplexing detection structure. Particularly, single light source multiplexing detection structure is advantages of small volume and high integration, which make it a plausible candidate for the portable mixed gas detection system; Meanwhile, multi light source multiplexing detection structure is embodiment of time division multiplex, frequency division multiplexing and wavelength division multiplexing, and become the leading structure of the mixed gas detection system because of its wider spectral range, higher spectral resolution, etc. The detection method applied to IR mixed gas detection includes non-dispersive infrared (NDIR) spectroscopy, wavelength and frequency-modulation spectroscopy, cavity-enhanced spectroscopy and photoacoustic spectroscopy, etc. The IR mixed gas detection system designed by researchers after recognizing the whole sections of the proposed system, which play a significant role in industrial and agricultural production, environmental monitoring, and life science, etc.

  19. Near-Infrared Spectroscopic Analysis of Galaxy Mergers: Revealing Obscured Accretion

    NASA Astrophysics Data System (ADS)

    Ferguson, Jason; Constantin, Anca; Satyapal, Shobita; Rothberg, Barry

    2017-01-01

    Galaxy interactions are ubiquitous and are believed to play a pivotal role in the formation and evolution of galaxies via facilitating gas inflows toward the central region of galaxies. These interactions are expected to trigger accretion of matter onto the central supermassive black holes, i.e., AGN activity. Nevertheless, despite decades of searching, observationally confirmed dual AGNs remain extremely rare. We present here a thorough near-infrared characterization of six examples of interacting galaxies with unambiguous confirmation of on-going mergers that are optically quiescent but have red mid-infrared colors that are associated with extragalactic sources with powerful AGN. We show Large Binocular Telescope spectra of nuclear regions that reveal a rich variety of emission and absorption features which allow us to explore several diagnostic tests for the AGN activity as well as for properties of the underlying stellar population. We find strong evidence for AGN emission in five out of these six interacting systems, which provides strong support for the efficiency with which the mid-infrared pre-selection technique finds dual AGN, and thus could exponentially increase the population of dual accretion systems in advanced mergers.

  20. Matrix isolation infrared spectroscopic study of 4-Pyridinecarboxaldehyde and of its UV-induced photochemistry

    NASA Astrophysics Data System (ADS)

    Cluyts, Liesel; Sharma, Archna; Kuş, Nihal; Schoone, Kristien; Fausto, Rui

    2017-01-01

    The structure, infrared spectrum, barrier to internal rotation, and photochemistry of 4-pyridinecarboxaldehyde (4PCA) were studied by low-temperature (10 K) matrix isolation infrared spectroscopy and quantum chemical calculations undertaken at both Moller-Plesset to second order (MP2) and density functional theory (DFT/B3LYP) levels of approximation. The molecule has a planar structure (Cs point group), with MP2/6-311 ++G(d,p) predicted internal rotation barrier of 26.6 kJ mol- 1, which is slightly smaller than that of benzaldehyde ( 30 kJ mol- 1), thus indicating a less important electron charge delocalization from the aromatic ring to the aldehyde moiety in 4PCA than in benzaldehyde. A complete assignment of the infrared spectrum of 4PCA isolated in an argon matrix has been done for the whole 4000-400 cm- 1 spectral range, improving over previously reported data. Both the geometric parameters and vibrational frequencies of the aldehyde group reveal the relevance in this molecule of the electronic charge back-donation effect from the oxygen trans lone electron pair to the aldehyde Csbnd H anti-bonding orbital. Upon in situ UV irradiation of the matrix-isolated compound, prompt decarbonylation was observed, leading to formation of pyridine.

  1. Impact of Spectroscopic Line Parameters on Carbon Monoxide Column Density Retrievals from Shortwave Infrared Nadir Observations

    NASA Astrophysics Data System (ADS)

    Schmidt, Denise; Gimeno Garcia, Sebastian; Schreier, Franz; Lichtenberg, Gunter

    2015-11-01

    Among the various input data required for the retrieval of atmospheric state parameters from infrared remote sensing observations molecular spectroscopy line data have a central role, because their quality is critical for the quality of the final product. Here we discuss the impact of the line parameters on vertical column densities (VCD) estimated from short wave infrared nadir observations. Using BIRRA (the Beer InfraRed Retrieval Algorithm) comprising a line-by-line radiative transfer code (forward model) and a separable nonlinear least squares solver for inversion we retrieve carbon monoxide from observations of SCIAMACHY aboard Envisat. Retrievals using recent versions of HITRAN und GEISA have been performed and the results are compared in terms of residual norms, molecular density scaling factors, their corresponding errors, and the final VCD product. The retrievals turn out to be quite similar for all three databases, so a definite recommendation in favor of one of these databases is difficult for the considered spectral range around 2.3 μm. Nevertheless, HITRAN 2012 appears to be advantageous when evaluating the different quality criteria.

  2. Differences in infrared spectroscopic data of connective tissues in transflectance and transmittance modes.

    PubMed

    Hanifi, Arash; McGoverin, Cushla; Ou, Ya-Ting; Safadi, Fayez; Spencer, Richard G; Pleshko, Nancy

    2013-05-24

    Fourier transform infrared imaging spectroscopy (FT-IRIS) has been used extensively to characterize the composition and orientation of macromolecules in thin tissue sections. Earlier and current studies of normal and polarized FT-IRIS data have primarily used tissues sectioned onto infrared transmissive substrates, such as salt windows. Recently, the use of low-emissivity ("low-e") substrates has become of great interest because of their low cost and favorable infrared optical properties. However, data are collected in transflectance mode when using low-e slides and in transmittance mode using salt windows. In the current study we investigated the comparability of these two modes for assessment of the composition of connective tissues. FT-IRIS data were obtained in transflectance and transmittance modes from serial sections of cartilage, bone and tendon, and from a standard polymer, polymethylmethacrylate. Both non-polarized and polarized FTIR data differed in absorbance, and in some cases peak position, between transflectance and transmittance modes. However, the FT-IRIS analysis of the collagen fibril orientation in cartilage resulted in the expected zonal arrangement of fibrils in both transmittance and transflectance. We conclude that numerical comparison of FT-IRIS-derived parameters of tissue composition should account for substrate type and data collection mode, while analysis of overall tissue architecture may be more invariant between modes.

  3. Modeling Ellipsometry Measurements of Molecular Thin-Film Contamination on Genesis Array Samples

    NASA Technical Reports Server (NTRS)

    Calaway, Michael J.; Stansbery, E. K.; McNamara, K. M.

    2006-01-01

    The discovery of a molecular thin-film contamination on Genesis flown array samples changed the course of preliminary assessment strategies. Analytical techniques developed to measure solar wind elemental abundances must now compensate for a thin-film contamination. Currently, this is done either by experimental cleaning before analyses or by depth-profiling techniques that bypass the surface contamination. Inside Johnson Space Center s Genesis dedicated ISO Class 4 (Class 10) cleanroom laboratory, the selection of collector array fragments allocated for solar wind analyses are based on the documentation of overall surface quality, visible surface particle contamination greater than 1 m, and the amount of thin film contamination measured by spectroscopic ellipsometry. Documenting the exact thickness, surface topography, and chemical composition of these contaminates is also critical for developing accurate cleaning methods. However, the first step in characterization of the molecular film is to develop accurate ellipsometry models that will determine an accurate thickness measurement of the contamination film.

  4. Automated High-Pressure Titration System with In Situ Infrared Spectroscopic Detection

    SciTech Connect

    Thompson, Christopher J.; Martin, Paul F.; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.

    2014-04-17

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell’s infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct radiation from a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system is demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay’s sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to dissolve

  5. Automated high-pressure titration system with in situ infrared spectroscopic detection

    NASA Astrophysics Data System (ADS)

    Thompson, Christopher J.; Martin, Paul F.; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.

    2014-04-01

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to dissolve

  6. Automated high-pressure titration system with in situ infrared spectroscopic detection.

    PubMed

    Thompson, Christopher J; Martin, Paul F; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T; Rosso, Kevin M; Felmy, Andrew R; Loring, John S

    2014-04-01

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to

  7. Mid-infrared spectroscopic study of crystallization of cubic spinel phase from metakaolin

    SciTech Connect

    Ptacek, Petr

    2011-10-15

    The structural changes during thermal conversion of metakaolinite into cubic spinel phase that was in literature considered as Al-Si spinel or {gamma}-Al{sub 2}O{sub 3} were investigated by mid-infrared spectroscopy (FT-IR) and differential scanning calorimetry (DSC) using medium ordered kaolin with high content of kaolinite. Spectrum features were studied in the mid-infrared region from 4000 to 400 cm{sup -1} as function of fractional conversion that resulted from DSC experiments. The increasing contends of Al-O bonds in the octahedral position (AlO{sub 6}) was observed during thermal transformation. The high ratio of antisymmetric stretching of {identical_to}Si-O-Al= and {identical_to}Si-O-Si{identical_to} bands and bands belonging to stretching of =Al-O bonds in the (AlO{sub 4}) tetrahedra and (AlO{sub 6}) octahedra decreases exponentially with fractional conversion. The antisymmetric stretching band of {identical_to}Si-O-Si{identical_to} bond in the (SiO{sub 4}) tetrahedra becomes more expressive due to formation of amorphous SiO{sub 2} phase. - Graphical abstract: The thermal conversion of metakaolinite into spinel phase was investigated by mid-infrared spectroscopy to found relationship between bands features and fractional convesrion. Highlights: > Formation of spinel phase from metakaolinite was studied by FT-IR. > Relationship between spectrum features and fractional conversion was investigated. > Intensity ratios of (AlO{sub 4}) and (AlO{sub 6}) decreases exponentially. > Antisymmetric stretching of (SiO{sub 4}) becomes more expressive during transformation.

  8. IN SITU ELLIPSOMETRY FOR SHOCK COMPRESSION MEASUREMENTS

    SciTech Connect

    Bakshi, L.; Eliezer, S.; Appelbaum, G.; Nissim, N.; Perelmutter, L.; Mond, M.

    2009-12-28

    Knowledge about the optical properties of materials at high pressure and high temperature is needed for EOS research. Ellipsometry measures the change in the polarization of a probe beam reflected from a surface. From the change in polarization, the real and imaginary parts of the time dependent complex index of refraction can be extracted. From the measured optical properties, fundamental physical properties of the material, such as emissivity, phase transitions, and electrical conductivity can be extracted. A dynamic ellipsometry measurement system with nanosecond resolution was built in order to measure all four stocks parameters. Gas gun was used to accelerate the impact flyer. Our experiments concentrated on the optical properties of 1020 steel targets with impact pressure range of 40-250 kbar. Although there are intrinsic difficulties with dynamic ellipsometric measurements, distinct changes were observed for 1020 steel under shock compression larger than 130 kbar, the alpha->epsilon phase transition.

  9. Fourier Transform Infrared Spectroscopic Analysis Of Plastic Capsule Materials Exposed To Deuterium-Tritium (DT) Gas

    SciTech Connect

    Schoonover, J R; Steckle, Jr., W P; Elliot, N; Ebey, P S; Nobile, A; Nikroo, A; Cook, R C; Letts, S A

    2005-06-16

    Planar samples of varying thicknesses of both CH and CD glow discharge polymer have been measured with Fourier transform infrared (FTIR) spectroscopy before and after exposure to deuterium-tritium (DT) gas at elevated temperature and pressure. Planar samples of polyimide films made from both hydrogenated and deuterated precursors have also been examined by FTIR before and after DT exposure. The post-exposure FTIR spectra demonstrated no measurable exchange of hydrogen with deuterium or tritium for either polymer. Evidence for oxidation of the glow discharge polymer due to atmospheric oxygen was the only chemical change indicated by the FTIR data.

  10. Fourier transform infrared spectroscopic characterization of grafting of 3-aminopropyl silanol onto aluminum/alumina substrate

    NASA Astrophysics Data System (ADS)

    Azour, Halima; Derouault, Jean; Lauroua, Pierre; Vezon, Gérard

    2000-07-01

    In order to remedy the limitations of state-of-the-art methods for red blood cells grouping and antibody screening we have tried to develop a new type of immunosensors based upon a metallic substrate. The first two steps of the manufacturing of such a sensor consist in the anodization and in the silanization of the metal surface. Fourier transform infrared spectroscopy (FTIR) has been used to investigate aluminum samples treated with the above process. FTIR analysis allows the accurate determination of the grafted species, and thus to perform the optimization of the experimental parameters.

  11. Infrared spectroscopic and chemometric approach for identifying binding medium in Sukias mansion's wall paintings.

    PubMed

    Haghighi, Zahra; Karimy, Amir-Hossein; Karami, Farshad; Bagheri Garmarudi, Amir; Khanmohammadi, Mohammadreza

    2015-11-11

    This paper addresses the application of infrared spectroscopy in combination with chemometrics to identify wall painting's binding medium while employing pattern recognition techniques to process FTIR data-set of complex samples. In this regard, based on the historical documents and previous researches, firstly 56 standard samples were prepared to represent strata of Persian wall paintings in the Safavid period in addition to real historic samples from the case study; Sukias mansion. Then, each sample was analysed by the means of FTIR and chemometrics. Finally, SIMCA was applied to the whole region of studied IR spectra which predicted egg yolk as the binding medium of Sukias mansion samples.

  12. Magnesium bicarbonate and carbonate interactions in aqueous solutions: An infrared spectroscopic and quantum chemical study

    NASA Astrophysics Data System (ADS)

    Stefánsson, Andri; Lemke, Kono H.; Bénézeth, Pascale; Schott, Jacques

    2017-02-01

    The interaction of magnesium with bicarbonate and carbonate ions in aqueous solutions was studied using infrared spectroscopy and quantum chemical calculations. Using the infrared vibrational bands for HCO3- and CO32- at 1200-1450 cm-1 (δC-OH, vS and v3) together with their molar absorptivity (ε), the concentrations of the HCO3- and CO32- ions and the corresponding Mg ion pairs have been determined. In the absence of Mg2+, measured spectra were accurately reproduced assuming that only HCO3- and CO32- were present in solution. Upon addition of Mg2+ at fixed pH, infrared spectra were observed to shift indicating presence of the MgHCO3+ and MgCO3 (aq) ion pairs. From measurements, the second ionization constant of carbonic acid and the MgHCO3+ and MgCO3 (aq) ion pair formation constants have been obtained, these being logK2 = -10.34 ± 0.04, logKMgHCO3+ = 1.12 ± 0.11 and logKMgCO3 = 2.98 ± 0.06, respectively. To support our experimental infrared measurements and to gain further insight into the molecular nature of the ion pair formation, density functional theory (DFT) calculations with VPT2 anharmonic correction were conducted. The most stable geometries predicted for the MgHCO3+ and MgCO3 (aq) ion pairs were a bi-dentate [MgHCO3]+(H2O)n and a monodentate [MgHCO3]+(OH)(H2O)n complexes, respectively. The predicted frequencies for HCO3-, CO32- and MgHCO3+ were found to shift toward those experimentally measured with an increasing H2O solvation number where possible band shifts were predicted for MgCO3 (aq) relative to CO32-, this being dependent on the exact structure and hydration of the bulk MgCO3 (aq) ion pair. Experimentally, the ion pair formations were found to have insignificant effects on the δC-OH, vS and v3 vibrational frequencies. The speciation of dissolved inorganic carbon may be significantly influenced by ion pair formation, particularly in alkaline solutions where they may be the predominant species.

  13. Compact Broad-Band Wavelength-Agile Mid-Infrared Semiconductor Lasers for Spectroscopic Sensing

    DTIC Science & Technology

    2004-12-01

    IEEE Photon. Technol. Lett. Jan 2005). Yi Wang, Chuan Peng, HuanLin Zhang, and Han Q. Le, “Wavelength modulation imaging with tunable mid- infrared...Wen-Yen Hwang, Jae Um, Bujin Guo, Hao Lee, and Chih- Hsiang Lin, “Continuous-wave operation of a 5.2 µm quantum-cascade laser up to 210 K”, Appl. Phys...Lett. 79, 1745-1747, (2001). 2. Proceedings Yi Wang, Yang Wang, Chuan Peng, HuanLin Zhang, Anush Seetheraman, and Han Q. Le, “Concepts for Scalable

  14. Characterising molecules for fundamental physics: an accurate spectroscopic model of methyltrioxorhenium derived from new infrared and millimetre-wave measurements.

    PubMed

    Asselin, Pierre; Berger, Yann; Huet, Thérèse R; Margulès, Laurent; Motiyenko, Roman; Hendricks, Richard J; Tarbutt, Michael R; Tokunaga, Sean K; Darquié, Benoît

    2017-02-08

    Precise spectroscopic analysis of polyatomic molecules enables many striking advances in physical chemistry and fundamental physics. We use several new high-resolution spectroscopic devices to improve our understanding of the rotational and rovibrational structure of methyltrioxorhenium (MTO), the achiral parent of a family of large oxorhenium compounds that are ideal candidate species for a planned measurement of parity violation in chiral molecules. Using millimetre-wave and infrared spectroscopy in a pulsed supersonic jet, a cryogenic buffer gas cell, and room temperature absorption cells, we probe the ground state and the Re[double bond, length as m-dash]O antisymmetric and symmetric stretching excited states of both CH3(187)ReO3 and CH3(185)ReO3 isotopologues in the gas phase with unprecedented precision. By extending the rotational spectra to the 150-300 GHz range, we characterize the ground state rotational and hyperfine structure up to J = 43 and K = 41, resulting in refinements to the rotational, quartic and hyperfine parameters, and the determination of sextic parameters and a centrifugal distortion correction to the quadrupolar hyperfine constant. We obtain rovibrational data for temperatures between 6 and 300 K in the 970-1015 cm(-1) range, at resolutions down to 8 MHz and accuracies of 30 MHz. We use these data to determine more precise excited-state rotational, Coriolis and quartic parameters, as well as the ground-state centrifugal distortion parameter DK of the (187)Re isotopologue. We also account for hyperfine structure in the rovibrational transitions and hence determine the upper state rhenium atom quadrupole coupling constant eQq'.

  15. Investigating the origin and spectroscopic variability of the near-infrared H I lines in the Herbig star VV Ser

    NASA Astrophysics Data System (ADS)

    Garcia Lopez, Rebeca; Kurosawa, Ryuichi; Caratti o Garatti, Alessio; Kreplin, Alexander; Weigelt, Gerd; Tambovtseva, Larisa V.; Grinin, Vladimir P.; Ray, Thomas P.

    2016-02-01

    The origin of the near-infrared (NIR) H I emission lines in young stellar objects are not yet understood. To probe it, we present multi-epoch LBT-LUCIFER spectroscopic observations of the Paδ, Paβ, and Brγ lines observed in the Herbig star VV Ser, along with Very Large Telescope Interferometer-AMBER Brγ spectro-interferometric observations at medium resolution. Our spectroscopic observations show line profile variability in all the H I lines. The strongest variability is observed in the redshifted part of the line profiles. The Brγ spectro-interferometric observations indicate that the Brγ line emitting region is smaller than the continuum emitting region. To interpret our results, we employed radiative transfer models with three different flow configurations: magnetospheric accretion, a magnetocentrifugally driven disc wind, and a schematic bipolar outflow. Our models suggest that the H I line emission in VV Ser is dominated by the contribution of an extended wind, perhaps a bipolar outflow. Although the exact physical process for producing such outflow is not known, this model is capable of reproducing the averaged single-peaked line profiles of the H I lines. Additionally, the observed visibilities, differential and closure phases are best reproduced when a wind is considered. Nevertheless, the complex line profiles and variability could be explained by changes in the relative contribution of the magnetosphere and/or winds to the line emission. This might indicate that the NIR H I lines are formed in a complex inner disc region where inflow and outflow components might coexist. Furthermore, the contribution of each of these mechanisms to the line appears time variable, suggesting a non-steady accretion/ejection flow.

  16. Single-mode interband cascade laser sources for mid-infrared spectroscopic applications

    NASA Astrophysics Data System (ADS)

    Scheuermann, J.; von Edlinger, M.; Weih, R.; Becker, S.; Nähle, L.; Fischer, M.; Koeth, J.; Kamp, M.; Höfling, S.

    2016-05-01

    Compared to the near infrared, many technologically and industrially relevant gas species have more than an order of magnitude higher absorption features in the mid-infrared (MIR) wavelength range. These species include for example important hydrocarbons (methane, acetylene), nitrogen oxides and sulfur oxides. Tunable laser absorption spectroscopy (TLAS) has proven to be a versatile tool for gas sensing applications with significant advantages compared to other techniques. These advantages include real time measurement, standoff detection and ruggedness of the sensor. We present interband cascade lasers (ICLs), which have evolved into important laser sources for the MIR spectral range from 3 to 7 μm. ICLs achieve high efficiency by cascading optically active zones whilst using interband transitions, so they combine common diode laser as well as quantum cascade laser based technologies. Our application grade singlemode distributed feedback devices operate continuous wave at room temperature and are offering several features especially useful for high performance TLAS applications like: side mode suppression ratio of > 30 dB, continuous tuning ranges up to 30 nm, low threshold power densities and low overall power consumption. The devices are typically integrated in a thermoelectrically cooled TO-style package, hermetically sealed using a cap with anti-reflection coated window. This low power consumption as well as the compact size and ruggedness of the fabricated laser sources makes them perfectly suited for battery powered portable solutions for in field spectroscopy applications.

  17. Reflective and photoacoustic infrared spectroscopic techniques in assessment of binding media in paintings

    NASA Astrophysics Data System (ADS)

    Łojewski, Tomasz; Bagniuk, Jacek; Kołodziej, Andrzej; Łojewska, Joanna

    2011-11-01

    This study proposes a method to estimate the lipid content in binding media in paintings that can be used at any laboratory equipped with an infrared spectrometer. The lipid content estimator, termed greasiness index (GI), is defined as a ratio of lipid ν(C=O) and protein amide I bands at 1743 and 1635 cm-1, respectively. Three Fourier transform infrared (FTIR) sampling techniques were evaluated for GI determination: reflective attenuated total reflection—ATR, specular reflection microscopy— μSR and photoacoustic—PAS. A set of model painting samples containing three tempera binding media (casein, egg, egg + oil), seven pigments and one varnish type were used in the study. Multivariate analysis was used to evaluate the resulting data. A good reproducibility of GI was obtained by ATR and PAS but not with μSR. The discriminative power of the technique is higher for unvarnished samples, but, generally, the GI estimator can be used for the categorisation of binding media in large populations of painting samples analysed with the same FTIR technique (sampling technique, detection, etc.).

  18. Critical review of near-infrared spectroscopic methods validations in pharmaceutical applications.

    PubMed

    De Bleye, C; Chavez, P-F; Mantanus, J; Marini, R; Hubert, Ph; Rozet, E; Ziemons, E

    2012-10-01

    Based on the large number of publications reported over the past five years, near-infrared spectroscopy (NIRS) is more and more considered an attractive and promising analytical tool regarding Process Analytical Technology and Green Chemistry. From the reviewed literature, few of these publications present a thoroughly validated NIRS method even if some guidelines have been published by different groups and regulatory authorities. However, as any analytical method, the validation of NIRS method is a mandatory step at the end of the development in order to give enough guarantees that each of the future results during routine use will be close enough to the true value. Besides the introduction of PAT concepts in the revised document of the European Pharmacopoeia (2.2.40) dealing with near-infrared spectroscopy recently published in Pharmeuropa, it agrees very well with this mandatory step. Indeed, the latter suggests to use similar analytical performance characteristics than those required for any analytical procedure based on acceptance criteria consistent with the intended use of the method. In this context, this review gives a comprehensive and critical overview of the methodologies applied to assess the validity of quantitative NIRS methods used in pharmaceutical applications.

  19. Automated high-pressure titration system with in situ infrared spectroscopic detection

    SciTech Connect

    Thompson, Christopher J. Martin, Paul F.; Chen, Jeffrey; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.; Benezeth, Pascale

    2014-04-15

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO{sub 2} (scCO{sub 2}) to generate an infrared calibration curve and determine the solubility of water in CO{sub 2} at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO{sub 2} at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO{sub 2} hydration, and ATR measurements provided insights into competitive residency of water and CO{sub 2} on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg{sub 2}SiO{sub 4}) in water-bearing scCO{sub 2} at 50 °C and 90 bar. Immediately after water dissolved in the scCO{sub 2}, a thin film of adsorbed water formed on the mineral surface, and the film

  20. Infrared spectroscopic study of thermotropic phase behavior of newly developed synthetic biopolymers.

    PubMed

    Bista, Rajan K; Bruch, Reinhard F; Covington, Aaron M

    2011-10-15

    The thermotropic phase behavior of a suite of newly developed self-forming synthetic biopolymers has been investigated by variable-temperature Fourier transform infrared (FT-IR) absorption spectroscopy. The temperature-induced infrared spectra of these artificial biopolymers (lipids) composed of 1,2-dimyristoyl-rac-glycerol-3-dodecaethylene glycol (GDM-12), 1,2-dioleoyl-rac-glycerol-3-dodecaethylene glycol (GDO-12) and 1,2-distearoyl-rac-glycerol-3-triicosaethylene glycol (GDS-23) in the spectral range of 4000-500 cm(-1) have been acquired by using a thin layered FT-IR spectrometer in conjunction with a custom built temperature-controlled demountable liquid cell having a pathlength of ∼15 μm. The lipids under consideration have long hydrophobic acyl chains and contain various units of hydrophilic polyethylene glycol (PEG) headgroups. In contrast to conventional phospholipids, this new kind of lipids forms liposomes or nanovesicles spontaneously upon hydration, without requiring external activation energy. We have found that the thermal stability of the PEGylated lipids differs greatly depending upon the acyl chain-lengths as well as the nature of the associated bonds and the number of PEG headgroup units. In particular, GDM-12 (saturated 14 hydrocarbon chains with 12 units of PEG headgroup) exhibits one sharp order-disorder phase transition over a temperature range increasing from 3°C to 5°C. Similarly, GDS-23 (saturated 18 hydrocarbon chains with 23 units of PEG headgroup) displays comparatively broad order-disorder phase transition profiles between temperature 17°C and 22°C. In contrast, GDO-12 (monounsaturated 18 hydrocarbon chains with 12 units of PEG headgroup) does not reveal any order-disorder transition phenomena demonstrating a highly disordered behavior for the entire temperature range. To confirm these observations, differential scanning calorimetry (DSC) was applied to the samples and revealed good agreement with the infrared spectroscopy results

  1. Infrared spectroscopic studies on reaction induced conformational changes in the NADH ubiquinone oxidoreductase (complex I).

    PubMed

    Hellwig, Petra; Kriegel, Sébastien; Friedrich, Thorsten

    2016-07-01

    Redox-dependent conformational changes are currently discussed to be a crucial part of the reaction mechanism of the respiratory complex I. Specialized difference Fourier transform infrared techniques allow the detection of side-chain movements and minute secondary structure changes. For complex I, (1)H/(2)H exchange kinetics of the amide modes revealed a better accessibility of the backbone in the presence of NADH and quinone. Interestingly, the presence of phospholipids, that is crucial for the catalytic activity of the isolated enzyme complex, changes the overall conformation. When comparing complex I samples from different species, very similar electrochemically induced FTIR difference spectra and very similar rearrangements are reported. Finally, the information obtained with variants and from Zn(2+) inhibited samples for the conformational reorganization of complex I upon electron transfer are discussed in this review. This article is part of a Special Issue entitled Respiratory complex I, edited by Volker Zickermann and Ulrich Brandt.

  2. Opening of an icosahedral boron framework: A combined infrared spectroscopic and computational study

    NASA Astrophysics Data System (ADS)

    Fagiani, Matias R.; Liu Zeonjuk, L.; Esser, Tim K.; Gabel, Detlef; Heine, Thomas; Asmis, Knut R.; Warneke, Jonas

    2015-04-01

    The opening of an icosahderal boron cage in the periodinated closo-dodecaborate B12I122- upon deiodination is studied using cryogenic ion trap vibrational spectroscopy combined with electronic structure calculations. Comparison of simulated vibrational spectra to the infrared photodissociation spectra of messenger-tagged B12I122- and B12In- (n = 7-9) formed by skimmer collision induced dissociation shows that the larger clusters absorb exclusively below 975 cm-1 and hence exhibit quasi-icosahedral B12-cage structures, while the higher energy absorptions in-between 1000 and 1300 cm-1 observed for n = 7 can only be recovered by considering a breakup of the icosahedral cage upon deiodination from n = 8 to n = 7.

  3. Infrared and 13C MAS nuclear magnetic resonance spectroscopic study of acetylation of cotton

    NASA Astrophysics Data System (ADS)

    Adebajo, Moses O.; Frost, Ray L.

    2004-01-01

    The acetylation of commercial cotton samples with acetic anhydride without solvents in the presence of about 5% 4-dimethylaminopyridine (DMAP) catalyst was followed using Fourier transform infrared (FTIR) and 13C MAS NMR spectroscopy. This preliminary investigation was conducted in an effort to develop hydrophobic, biodegradable, cellulosic materials for subsequent application in oil spill cleanup. The FTIR results provide clear evidence for successful acetylation though the NMR results indicate that the level of acetylation is low. Nevertheless, the overall results indicate that cotton fibres are potential candidates suitable for further development via acetylation into hydrophobic sorbent materials for subsequent oil spill cleanup application. The results also indicate that de-acetylation, the reverse of the equilibrium acetylation reaction, occurred when the acetylation reaction was prolonged beyond 3 h.

  4. Structure and spectroscopic properties of Er3+ doped germanate glass for mid-infrared application

    NASA Astrophysics Data System (ADS)

    Wei, Tao; Chen, Fangze; Jing, Xufeng; Wang, Fengchao; Tian, Ying; Xu, Shiqing

    2014-05-01

    Intense 2.7 μm emission derived from modified Er3+ doped germanate glass was reported. Raman spectrum analysis was carried out to grasp glass structure. Based on the absorption spectrum, the Judd-Ofelt parameters and radiative properties were calculated originated from Judd-Ofelt theory. 2.7 μm emission characteristics, stark splitting features and energy transfer processes upon excitation of a conventional 808 nm or 980 nm laser diode were carefully investigated. The prepared glass possesses high spontaneous transition probability (34.28 s-1), large calculated emission cross section (13 × 10-21 cm2) and gain coefficient (5.4 cm-1) for the 4I11/2 → 4I13/2 transition. These results indicate that Er3+ doped germanate glass has potential applications in mid-infrared lasers and amplifiers.

  5. Probing depth and dynamic response of speckles in near infrared region for spectroscopic blood flow imaging

    NASA Astrophysics Data System (ADS)

    Yokoi, Naomichi; Aizu, Yoshihisa

    2016-04-01

    Imaging method based on bio-speckles is a useful means for blood flow visualization of living bodies and, it has been utilized for analyzing the condition or the health state of living bodies. Actually, the sensitivity of blood flow is influenced by tissue optical properties, which depend on the wavelength of illuminating laser light. In the present study, we experimentally investigate characteristics of the blood flow images obtained with two wavelengths of 780 nm and 830 nm in the near-infrared region. Experiments are conducted for sample models using a pork layer, horse blood layer and mirror, and for a human wrist and finger, to investigate optical penetration depth and dynamic response of speckles to the blood flow velocity for two wavelengths.

  6. Fourier-transform infrared spectroscopic comparison of cultured human fibroblast and fibrosarcoma cells

    NASA Astrophysics Data System (ADS)

    Yang, Difei; Castro, Dan J.; El-Sayed, Ivan H.; El-Sayed, Mostafa A.; Saxton, Romaine E.; Zhang, Nancy Y.

    1995-05-01

    Infrared vibration spectroscopy appears to be a more powerful technique for diagnosis than visible or UV spectroscopy. Advantages of IR spectra include: 1) vibrational motion has a smaller tissue absorption coefficient than electronic motion, 2) scattering of infrared radiation has a lower cross section than visible or UV light, (these two facts allow deeper penetration of IR radiation) and 3) vibration spectra provide a better fingerprint of chemical groups present in cells than the unresolved broad electronic spectrum of biological molecules. In the present work, Fourier-transform IR spectroscopy was used to compare cultured human fibroblast and malignant fibrosarcoma cells. Significant differences were observed by comparing the spectra of the normal cells with that of the cancer cells. the PO2 symmetric stretching mode at 1082cm-1 in the cancer cell is reduced in intensity. These observations are similar to those reported previously by Wong et al in comparing the IR spectra of pairs of normal and cancerous cells from the colon and cervix. However, the observed increase in the relative intensity of the symmetric to antisymmetric CH3 bending mode are only found in fibrosarcoma and basal cell carcinoma. The decrease in intensity of the CH2 bending mode relative to that of CH3 mode was observed only for fibrosarcoma cells. This finding with paired human fibroblast and fibrosarcoma cells suggests that fatty acid chains or side chains of protein in the cancer cells are partially degraded leading to more terminal carbon. It is also possible that changes in the environment upon carcinogenesis induces a change in the relative absorption cross sections for the CH3 and CH2 bending vibrations.

  7. An Overview of Ultraviolet Through Infrared Reflectance Spectroscopic Observations of Mercury During the First MESSENGER Flyby

    NASA Astrophysics Data System (ADS)

    Izenberg, N. R.; McClintock, W. E.; Holsclaw, G. M.; Robinson, M. S.; Blewett, D. T.; Domingue, D. L.; Head, J. W.; Jensen, E. A.; Kochte, M. C.; Lankton, M. R.; Murchie, S. L.; Sprague, A. L.; Vilas, F.; Solomon, S. C.

    2008-05-01

    During the first MESSENGER flyby of Mercury on January 14, 2008, the Mercury Atmospheric and Surface Composition Spectrometer (MASCS) measured reflectance spectra from Mercury's surface over the wavelength range 220-1450 nm. These are the first high-spatial-resolution (<10 km) spectra at any wavelength and the first reported ultraviolet (UV, wavelength < 360 nm) observations of the surface. MASCS observed the sunlit surface for approximately 14 minutes after closest approach, acquiring over 650 spectra with the Visible and Infrared Spectrograph (VIRS) detectors of MASCS sensitive to wavelengths of 350-1450 nm. MASCS also obtained just under four grating scans in the middle ultraviolet (220-320 nm) using MASCS's Ultraviolet and Visible Spectrometer (UVVS) component. Most of the near-equatorial ground track of the observation covered terrain in the previously unseen hemisphere of Mercury but also crossed into the hemisphere viewed by Mariner 10 south of Mozart crater and in Tir Planitia. Ground-based observations of Mercury reveal a surface with a red, nearly featureless spectrum in the visible and near-infrared (wavelengths greater than ~ 500 nm) that has been interpreted as evidence for a largely iron-poor feldspathic composition. Initial analyses of VIRS spectra also show strongly red-sloped, near featureless spectra, appearing to support contentions of low iron abundance in surface materials. However, interpretation of Mercury's spectral reflectance is complicated by our lack of knowledge about the effects on its surface materials of space weathering, which both suppresses the strength of spectral absorption features and reddens the spectrum. Brightness variations and absorption bands in ultraviolet reflectance may help determine both the nature and extent of processes that modify observed reflectance at longer wavelengths. MASCS surface observation data demonstrate spectral variations across the Mercury surface that can be related to previous telescopic

  8. Pb+ irradiation of synthetic zircon (ZrSiO4): Infrared spectroscopic investigation

    SciTech Connect

    Zhang, Ming; Boatner, Lynn A; Salje, Ekhard K.H.; Honda, Shin-ichi; Ewing, Rodney C.

    2008-01-01

    The structural variations of synthetic zircon (ZrSiO{sub 4}) single crystals irradiated at room temperature by 280 keV Pb{sup +} ions (with fluences up to 1 x 10{sup 15} ions/cm{sup 2}) were investigated using infrared (IR) spectroscopy. Like metamict zircon whose crystal structure is damaged and amorphized by naturally occurring {alpha}-decay events, the Pb{sup +}-irradiated zircon crystals show a dramatic decrease in reflectivity. However, no significant decrease in wavenumbers of the stretching vibrations of SiO{sub 4} tetrahedra in zircon was detected. The Pb{sup +}-implanted zircon exhibits new IR bands, indicating irradiation-induced new vibrations or domains, clusters or phases in addition to SiO{sub 2} and ZrO{sub 2}. IR features consistent with those of Pb silicates (with a divalent state, i.e., Pb{sup 2+}) are also found in the irradiated sample. This finding implies that some of the radiogenic Pb in natural zircon might not actually reside in the zircon lattice or in ZrSiO{sub 4} phases, but form new local domains or clusters. Infrared bands of OH-stretching vibrations were also detected in the irradiated synthetic zircon, which was originally free from OH features prior to the irradiation. These results indicate that H can easily diffuse into the irradiated layer or into irradiated-induced phases to form OH or and hydrous species after the irradiated material is damaged. The type and content of hydrous species vary with irradiation fluences.

  9. TRANSITIONAL DISKS AND THEIR ORIGINS: AN INFRARED SPECTROSCOPIC SURVEY OF ORION A

    SciTech Connect

    Kim, K. H.; Watson, Dan M.; Manoj, P.; Forrest, W. J.; Arnold, Laura; Najita, Joan; Furlan, Elise; Sargent, Benjamin; Espaillat, Catherine; Muzerolle, James; Megeath, S. T.; Calvet, Nuria; Green, Joel D.

    2013-06-01

    Transitional disks are protoplanetary disks around young stars, with inner holes or gaps which are surrounded by optically thick outer, and often inner, disks. Here we present observations of 62 new transitional disks in the Orion A star-forming region. These were identified using the Spitzer Space Telescope's Infrared Spectrograph and followed up with determinations of stellar and accretion parameters using the Infrared Telescope Facility's SpeX. We combine these new observations with our previous results on transitional disks in Taurus, Chamaeleon I, Ophiuchus, and Perseus, and with archival X-ray observations. This produces a sample of 105 transitional disks of ''cluster'' age 3 Myr or less, by far the largest hitherto assembled. We use this sample to search for trends between the radial structure in the disks and many other system properties, in order to place constraints on the possible origins of transitional disks. We see a clear progression of host-star accretion rate and the different disk morphologies. We confirm that transitional disks with complete central clearings have median accretion rates an order of magnitude smaller than radially continuous disks of the same population. Pre-transitional disks-those objects with gaps that separate inner and outer disks-have median accretion rates intermediate between the two. Our results from the search for statistically significant trends, especially related to M-dot , strongly support that in both cases the gaps are far more likely to be due to the gravitational influence of Jovian planets or brown dwarfs orbiting within the gaps, than to any of the photoevaporative, turbulent, or grain-growth processes that can lead to disk dissipation. We also find that the fraction of Class II YSOs which are transitional disks is large, 0.1-0.2, especially in the youngest associations.

  10. Mid-infrared spectroscopic assessment of nanotoxicity in gram-negative vs. gram-positive bacteria.

    PubMed

    Heys, Kelly A; Riding, Matthew J; Strong, Rebecca J; Shore, Richard F; Pereira, M Glória; Jones, Kevin C; Semple, Kirk T; Martin, Francis L

    2014-03-07

    Nanoparticles appear to induce toxic effects through a variety of mechanisms including generation of reactive oxygen species (ROS), physical contact with the cell membrane and indirect catalysis due to remnants from manufacture. The development and subsequent increasing usage of nanomaterials has highlighted a growing need to characterize and assess the toxicity of nanoparticles, particularly those that may have detrimental health effects such as carbon-based nanomaterials (CBNs). Due to interactions of nanoparticles with some reagents, many traditional toxicity tests are unsuitable for use with CBNs. Infrared (IR) spectroscopy is a non-destructive, high throughput technique, which is unhindered by such problems. We explored the application of IR spectroscopy to investigate the effects of CBNs on Gram-negative (Pseudomonas fluorescens) and Gram-positive (Mycobacterium vanbaalenii PYR-1) bacteria. Two types of IR spectroscopy were compared: attenuated total reflection Fourier-transform infrared (ATR-FTIR) and synchrotron radiation-based FTIR (SR-FTIR) spectroscopy. This showed that Gram-positive and Gram-negative bacteria exhibit differing alterations when exposed to CBNs. Gram-positive bacteria appear more resistant to these agents and this may be due to the protection afforded by their more sturdy cell wall. Markers of exposure also vary according to Gram status; Amide II was consistently altered in Gram-negative bacteria and carbohydrate altered in Gram-positive bacteria. ATR-FTIR and SR-FTIR spectroscopy could both be applied to extract biochemical alterations induced by each CBN that were consistent across the two bacterial species; these may represent potential biomarkers of nanoparticle-induced alterations. Vibrational spectroscopy approaches may provide a novel means of fingerprinting the effects of CBNs in target cells.

  11. Fourier transform infra-red spectroscopic signatures for lung cells' epithelial mesenchymal transition: A preliminary report

    NASA Astrophysics Data System (ADS)

    Sarkar, Atasi; Sengupta, Sanghamitra; Mukherjee, Anirban; Chatterjee, Jyotirmoy

    2017-02-01

    Infra red (IR) spectral characterization can provide label-free cellular metabolic signatures of normal and diseased circumstances in a rapid and non-invasive manner. Present study endeavoured to enlist Fourier transform infra red (FTIR) spectroscopic signatures for lung normal and cancer cells during chemically induced epithelial mesenchymal transition (EMT) for which global metabolic dimension is not well reported yet. Occurrence of EMT was validated with morphological and immunocytochemical confirmation. Pre-processed spectral data was analyzed using ANOVA and principal component analysis-linear discriminant analysis (PCA-LDA). Significant differences observed in peak area corresponding to biochemical fingerprint (900-1800 cm- 1) and high wave-number (2800-3800 cm- 1) regions contributed to adequate PCA-LDA segregation of cells undergoing EMT. The findings were validated by re-analysis of data using another in-house built binary classifier namely vector valued regularized kernel approximation (VVRKFA), in order to understand EMT progression. To improve the classification accuracy, forward feature selection (FFS) tool was employed in extracting potent spectral signatures by eliminating undesirable noise. Gradual increase in classification accuracy with EMT progression of both cell types indicated prominence of the biochemical alterations. Rapid changes in cellular metabolome noted in cancer cells within first 24 h of EMT induction along with higher classification accuracy for cancer cell groups in comparison to normal cells might be attributed to inherent differences between them. Spectral features were suggestive of EMT triggered changes in nucleic acid, protein, lipid and bound water contents which can emerge as the useful markers to capture EMT related cellular characteristics.

  12. Vertical profiling of methane and carbon dioxide using high resolution near-infrared heterodyne spectroscopic observations

    NASA Astrophysics Data System (ADS)

    Rodin, Alexander; Klimchuk, Artem; Churbanov, Dmitry; Pereslavtseva, Anastasia; Spiridonov, Maxim; Nadezhdinskyi, Alexander

    2014-05-01

    We present new method of monitoring greenhouse gases using spectroscopic observations of solar radiation passed through the atmosphere with spectral resolution ΛvδΛ up to 108. Such a high resolution is achieved by heterodyne technique and allows to retrieve full information about spectral line shape which, in turn, is used to distinguish contribution of different atmospheric layers to the resulting absorption. Weak absorption line at 6056.5 cm-1 was selected for CO2 measurements and a quartet of lines centered at 6057 cm-1for CH4. The instrument setup includes Sun tracker with a microtelescope and chopper, diode DFB laser used as a local oscillator, a bundle of single mode optical fibers that provides medium for radiation transfer and beam coupling, reference cell with depressurized methane for LO frequency stabilization, and Fabry-Perot etalon for LO frequency calibration. A commercial p-i-n diode with squared detector replaces a mixer and IF spectrometer, providing measurement of heterodyne beating within a bandpass of few MHz, which determines the effective spectral resolution of the instrument. Spectral coverage within narrow range (about 1 cm-1) is provided by ramping the LO frequency based on feedback from the reference channel. Observations of Sun in the Moscow region have resulted for the first time in measurements of the atmospheric transmission near 1.65 μm with sub-Doppler spectral resolution. In order to retrieve vertical profiles of methane and carbon dioxide we developed the inversion algorithm implementing Tikhonov regularization approach. With measured transmission having S/N ratio of 100 or higher, the uncertainty of CH4 profile is about 10 ppb, with the uncertainty of CO2 profile at 1 ppm. This techniques is promising an affordable opportunity or widespread monitoring of greenhouse gases and may be implemented on existing ground-based stations. This work has been supported by the grant of Russian Ministry of education and science #11.G34.31.0074

  13. Molecular Shocks Associated with Massive Young Stars: CO Line Images with a New Far-Infrared Spectroscopic Camera on the Kuiper Airborne Observatory

    NASA Technical Reports Server (NTRS)

    Watson, Dan M.

    1997-01-01

    Under the terms of our contract with NASA Ames Research Center, the University of Rochester (UR) offers the following final technical report on grant NAG 2-958, Molecular shocks associated with massive young stars: CO line images with a new far-infrared spectroscopic camera, given for implementation of the UR Far-Infrared Spectroscopic Camera (FISC) on the Kuiper Airborne Observatory (KAO), and use of this camera for observations of star-formation regions 1. Two KAO flights in FY 1995, the final year of KAO operations, were awarded to this program, conditional upon a technical readiness confirmation which was given in January 1995. The funding period covered in this report is 1 October 1994 - 30 September 1996. The project was supported with $30,000, and no funds remained at the conclusion of the project.

  14. Matrix isolation infrared spectroscopic and theoretical studies on the reactions of niobium and tantalum mono- and dioxides with methane.

    PubMed

    Wang, Guanjun; Lai, Sixue; Chen, Mohua; Zhou, Mingfei

    2005-10-27

    The reactions of niobium and tantalum monoxides and dioxides with methane have been investigated using matrix isolation infrared spectroscopic and theoretical calculations. The niobium and tantalum oxide molecules were prepared by laser evaporation of Nb(2)O(5) and Ta(2)O(5) bulk targets. The niobium monoxide molecule interacted with methane to form the ONb(CH(4)) complex, which was predicted to have C(3)(v)() symmetry with the metal atom coordinated to three hydrogen atoms of the methane molecule. The ONb(CH(4)) complex rearranged to the CH(3)Nb(O)H isomer upon 300 nm < lambda < 580 nm irradiation. The analogous OTa(CH(4)) complex was not observed, but the CH(3)Ta(O)H molecule was produced upon UV irradiation. The niobium and tantalum dioxide molecules reacted with methane to form the O(2)Nb(CH(4)) and O(2)Ta(CH(4)) complexes with C(s)() symmetry, which underwent photochemical rearrangement to the CH(3)Nb(O)OH and CH(3)Ta(O)OH isomers upon ultraviolet irradiation.

  15. Infrared spectroscopic imaging of the biochemical modifications induced in the cerebellum of the Niemann-Pick type C mouse

    NASA Astrophysics Data System (ADS)

    Kidder, Linda H.; Colarusso, Pina; Stewart, Sarah A.; Levin, Ira W.; Appel, Nathan M.; Lester, David S.; Pentchev, Peter G.; Lewis, E. N.

    1999-01-01

    WE have applied Fourier transform infrared (IR) spectroscopic imaging to the investigation of the neuropathologic effects of a genetic lipid storage disease, Niemann-Pick type C (NPC). Tissue sections both from the cerebella of a strain of BALB/c mice that demonstrated morphology and pathology of the human disease and from control animals were used. These samples were analyzed by standard histopathological procedures as well as this new IR imaging approach. The IR absorbance images exhibit contrast based on biochemical variations and allow for the identification of the cellular layers within the tissue samples. Furthermore, these images provide a qualitative description of the localized biochemical differences existing between the diseased and control tissue in the absence of histological staining. Statistical analyses of the IR spectra extracted from individual cell layers of the imaging data sets provide concise quantitative descriptions of these biochemical changes. The results indicate that lipid is depleted specifically in the white matter of the NPC mouse in comparison to the control samples. Minor differences were noted for the granular layers, but no significant differences were observed in the molecular layers of the cerebellar tissue. These changes are consistent with significant demyelination within the cerebellum of the NPC mouse.

  16. Infra-red spectroscopic characteristics of naphthalocyanine in bis(naphthalocyaninato) rare earth complexes peripherally substituted with thiophenyl derivatives.

    PubMed

    Li, Xiaobo; Mao, Yajun; Xiao, Chi; Lu, Fanli

    2015-04-05

    The infra-red (IR) spectroscopic data for a series of eleven rare earth double-deckers MIII[Nc(SPh)8]2 (M=Y, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho and Er) have been collected and systematically investigated. For MIII[Nc(SPh)8]2, typical IR marker bands for the naphthalocyanine anion radical [Nc(SPh)8].- were observed at 1317-1325 cm(-1) as the most intense absorption bands, which can be attributed to the pyrrole stretching. As for Ce[Nc(SPh)8]2, the typical IR marker band was also observed at 1317 cm(-1), which shows that the cerium complex exists as the form of CeIII[Nc(SPh)8]2-[Nc(SPh)8].-. In addition, both the Q-bands of electronic absorption spectra and the typical IR absorption bands of naphthalocyanine radical anion [Nc(SPh)8].- move to the high energy as the decrease of rare earth metal ionic radius. These facts suggest that the π-π electron interaction in these double-deckers becomes stronger along with the lanthanide contraction.

  17. Investigating the biochemical progression of liver disease through fibrosis, cirrhosis, dysplasia, and hepatocellular carcinoma using Fourier transform infrared spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Sreedhar, Hari; Pant, Mamta; Ronquillo, Nemencio R.; Davidson, Bennett; Nguyen, Peter; Chennuri, Rohini; Choi, Jacqueline; Herrera, Joaquin A.; Hinojosa, Ana C.; Jin, Ming; Kajdacsy-Balla, Andre; Guzman, Grace; Walsh, Michael J.

    2014-03-01

    Hepatocellular carcinoma (HCC) is the most common form of primary hepatic carcinoma. HCC ranks the fourth most prevalent malignant tumor and the third leading cause of cancer related death in the world. Hepatocellular carcinoma develops in the context of chronic liver disease and its evolution is characterized by progression through intermediate stages to advanced disease and possibly even death. The primary sequence of hepatocarcinogenesis includes the development of cirrhosis, followed by dysplasia, and hepatocellular carcinoma.1 We addressed the utility of Fourier Transform Infrared (FT-IR) spectroscopic imaging, both as a diagnostic tool of the different stages of the disease and to gain insight into the biochemical process associated with disease progression. Tissue microarrays were obtained from the University of Illinois at Chicago tissue bank consisting of liver explants from 12 transplant patients. Tissue core biopsies were obtained from each explant targeting regions of normal, liver cell dysplasia including large cell change and small cell change, and hepatocellular carcinoma. We obtained FT-IR images of these tissues using a modified FT-IR system with high definition capabilities. Firstly, a supervised spectral classifier was built to discriminate between normal and cancerous hepatocytes. Secondly, an expanded classifier was built to discriminate small cell and large cell changes in liver disease. With the emerging advances in FT-IR instrumentation and computation there is a strong drive to develop this technology as a powerful adjunct to current histopathology approaches to improve disease diagnosis and prognosis.

  18. Conformers of β-aminoisobutyric acid probed by jet-cooled microwave and matrix isolation infrared spectroscopic techniques.

    PubMed

    Kuş, N; Sharma, A; Peña, I; Bermúdez, M C; Cabezas, C; Alonso, J L; Fausto, R

    2013-04-14

    β-aminoisobutyric acid (BAIBA) has been studied in isolation conditions: in the gas phase and trapped into a cryogenic N2 matrix. A solid sample of the compound was vaporized by laser ablation and investigated through their rotational spectra in a supersonic expansion using two different spectroscopic techniques: broadband chirped pulse Fourier transform microwave spectroscopy and conventional molecular beam Fourier transform microwave spectroscopy. Four conformers with structures of two types could be successfully identified by comparison of the experimental rotational and (14)N nuclear quadruple coupling constants with those predicted theoretically: type A, bearing an OH⋯N intramolecular hydrogen bond and its carboxylic group in the trans geometry (H-O-C=O dihedral ∼180°), and type B, having an NH⋯O bond and the cis arrangement of the carboxylic group. These two types of conformers could also be trapped from the gas phase into a cryogenic N2 matrix and probed by Fourier transform infrared (IR) spectroscopy. In situ irradiation of BAIBA isolated in N2 matrix of type B conformers using near-IR radiation tuned at the frequency of the O-H stretching 1st overtone (∼6930 cm(-1)) of these forms allowed to selectively convert them into type A conformers and into a new type of conformers of higher energy (type D) bearing an NH⋯O=C bond and a O-H "free" trans carboxylic group.

  19. Conformers of β-aminoisobutyric acid probed by jet-cooled microwave and matrix isolation infrared spectroscopic techniques

    NASA Astrophysics Data System (ADS)

    Kuş, N.; Sharma, A.; Peña, I.; Bermúdez, M. C.; Cabezas, C.; Alonso, J. L.; Fausto, R.

    2013-04-01

    β-aminoisobutyric acid (BAIBA) has been studied in isolation conditions: in the gas phase and trapped into a cryogenic N2 matrix. A solid sample of the compound was vaporized by laser ablation and investigated through their rotational spectra in a supersonic expansion using two different spectroscopic techniques: broadband chirped pulse Fourier transform microwave spectroscopy and conventional molecular beam Fourier transform microwave spectroscopy. Four conformers with structures of two types could be successfully identified by comparison of the experimental rotational and 14N nuclear quadruple coupling constants with those predicted theoretically: type A, bearing an OH⋯N intramolecular hydrogen bond and its carboxylic group in the trans geometry (H-O-C=O dihedral ˜180°), and type B, having an NH⋯O bond and the cis arrangement of the carboxylic group. These two types of conformers could also be trapped from the gas phase into a cryogenic N2 matrix and probed by Fourier transform infrared (IR) spectroscopy. In situ irradiation of BAIBA isolated in N2 matrix of type B conformers using near-IR radiation tuned at the frequency of the O-H stretching 1st overtone (˜6930 cm-1) of these forms allowed to selectively convert them into type A conformers and into a new type of conformers of higher energy (type D) bearing an NH⋯O=C bond and a O-H "free" trans carboxylic group.

  20. Spectroscopic properties and near-infrared broadband luminescence of Bi-doped SrB4O7 glasses and crystalline materials.

    PubMed

    Su, Liangbi; Zhou, Peng; Yu, Jun; Li, Hongjun; Zheng, Lihe; Wu, Feng; Yang, Yan; Yang, Qiuhong; Xu, Jun

    2009-08-03

    Spectroscopic properties of Bi-doped SrB(4)O(7) glasses, sintered compounds, polycrystalline materials, and single crystals were investigated. Broadband near-infrared luminescence was realized in Bi-doped SrB(4)O(7) glasses with basicity and polycrystalline materials with non-bridging oxygens. In Bi:SrB(4)O(7) single crystals, only visible luminescence of Bi(3+) and Bi(2+) was observed, but no near-infrared. The rigid three-dimensional network of SrB(4)O(7) crystal is proved to be unfavorable for accommodation of Bi(+) ions.

  1. High-Resolution Infrared Spectroscopic Measurements of Comet 2PlEncke: Unusual Organic Composition and Low Rotational Temperatures

    NASA Technical Reports Server (NTRS)

    Radeva, Yana L.; Mumma, Michael J.; Villanueva, Geronimo L.; Bonev, Boncho P.; DiSanti, Michael A.; A'Hearn, Michael F.; Dello Russo, Neil

    2013-01-01

    We present high-resolution infrared spectroscopic measurements of the ecliptic comet 2P/Encke, observed on 4-6 Nov. 2003 during its close approach to the Earth, using the Near Infrared Echelle Spectrograph on the Keck II telescope. We present flux-calibrated spectra, production rates, and mixing ratios for H2O, CH3OH, HCN, H2CO, C2H2, C2H6, CH4 and CO. Comet 2P/Encke is a dynamical end-member among comets because of its short period of 3.3 years. Relative to "organics-normal" comets, we determined that 2PlEncke is depleted in HCN, H2CO, C2H2, C2H6, CH4 and CO, but it is enriched in CH3OH. We compared mixing ratios of these organic species measured on separate dates, and we see no evidence of macroscopic chemical heterogeneity in the nucleus of 2P/Encke, however, this conclusion is limited by sparse temporal sampling. The depleted abundances of most measured species suggest that 2P/Encke may have formed closer to the young Sun, before its insertion to the Kuiper belt, compared with "organics-normal" comets - as was previously suggested for other depleted comets (e.g. C/1999 S4 (LINEAR)). We measured very low rotational temperatures of 20 - 30 K for H2O, CH3OH and HCN in the near nucleus region of 2P/Encke, which correlate with one of the lowest cometary gas production rates (approx. 2.6 x 10(exp 27) molecules/s) measured thus far in the infrared. This suggests that we are seeing the effects of more efficient radiative cooling, insufficient collisional excitation, and/or inefficient heating by fast H-atoms (and icy grains) in the observed region of the coma. Its extremely short orbital period, very low gas production rate, and classification as an ecliptic comet, make 2PlEncke an important addition to our growing database, and contribute significantly to the establishment of a chemical taxonomy of comets.

  2. Instrument for near infrared emission spectroscopic probing of human fingertips in vivo

    NASA Astrophysics Data System (ADS)

    Chaiken, J.; Deng, Bin; Bussjager, Rebecca J.; Shaheen, George; Rice, David; Stehlik, Dave; Fayos, John

    2010-03-01

    We present instrumentation for probing of volar side fingertip capillary beds with free space coupled near infrared light while collecting Raman, Rayleigh, and Mie scattered light as well as fluorescence. Fingertip skin capillary beds are highly vascularized relative to other tissues and present a desirable target for noninvasive probing of blood. But human hands and fingers in particular are also highly idiosyncratic body parts requiring specific apparatus to allow careful and methodical spectoscopic probing. The apparatus includes means for precise and reproducible placement of the tissues relative to the optical aperture. Appropriate means are provided for applying and maintaining pressure to keep surface tissues immobile during experiments while obtaining the desired blood content and flow. Soft matter, e.g., skin, extrudes into the aperture in response to any applied pressure, e.g., to keep the tissue in registration with the optical system, so the position, contact area, pressure, and force are continuously measured and recorded to produce feedback for an actuator applying force and to discern the compliance of the test subject. The compliance strongly affects the reliability of the measurement and human factors must be adequately managed in the case of in vivo probing. The apparatus produces reproducible observations and measurements that allow consistent probing of the tissues of a wide range of skin types.

  3. Infrared spectroscopic studies of cells and tissues: triple helix proteins as a potential biomarker for tumors.

    PubMed

    Stelling, Allison L; Toher, Deirdre; Uckermann, Ortrud; Tavkin, Jelena; Leipnitz, Elke; Schweizer, Julia; Cramm, Holger; Steiner, Gerald; Geiger, Kathrin D; Kirsch, Matthias

    2013-01-01

    In this work, the infrared (IR) spectra of living neural cells in suspension, native brain tissue, and native brain tumor tissue were investigated. Methods were developed to overcome the strong IR signal of liquid water so that the signal from the cellular biochemicals could be seen. Measurements could be performed during surgeries, within minutes after resection. Comparison between normal tissue, different cell lineages in suspension, and tumors allowed preliminary assignments of IR bands to be made. The most dramatic difference between tissues and cells was found to be in weaker IR absorbances usually assigned to the triple helix of collagens. Triple helix domains are common in larger structural proteins, and are typically found in the extracellular matrix (ECM) of tissues. An algorithm to correct offsets and calculate the band heights and positions of these bands was developed, so the variance between identical measurements could be assessed. The initial results indicate the triple helix signal is surprisingly consistent between different individuals, and is altered in tumor tissues. Taken together, these preliminary investigations indicate this triple helix signal may be a reliable biomarker for a tumor-like microenvironment. Thus, this signal has potential to aid in the intra-operational delineation of brain tumor borders.

  4. A portable cross-shape near-infrared spectroscopic detector for bone marrow lesions diagnosis

    NASA Astrophysics Data System (ADS)

    Su, Yu; Li, Ting

    2016-02-01

    Bone marrow lesions (BMLs) is an incidence-increasing disease which seriously hazard to human health and possibly contribute to paralysis. Delayed treatment often occurred to BMLs patients due to its characteristics such as complex and diverse clinical manifestations, non-specific, easy to misdiagnosis and etc. The conventional diagnosis methods of BMLs mainly rely on bone marrow biopsy/aspiration, which are invasive, painful, high health risk, and discontinuous which disabled monitoring and during-surgery guidance. Thus we proposed to develop a noninvasive, real-time, continuous measurement, easy-operated device aimed at detecting bone marrow diseases. This device is based on near-infrared spectroscopy and the probe is designed with a cross-shape to tightly and comfortably attach human spine. Space-resolved source-detector placement and measurement algorithm are employed. Four selected wavelength were utilized here to extract BMLs-related component contents of oxy-, deoxy-hemoglobin, fat, scattering index corresponding to fibrosis. We carried out an ink experiment and one clinical measurement to verify the feasibility of our device. The potential of NIRS in BMLs clinics is revealed.

  5. A near-infrared high-resolution spectroscopic survey of bulge stars - JASMINE prestudy

    NASA Astrophysics Data System (ADS)

    Tsujimoto, T.; Gouda, N.; Kobayashi, N.; Yasui, C.; Kondo, S.; Minami, A.; Motohara, K.; Ikeda, Y.

    2006-08-01

    We are developing a new near-infrared high-resolution (R[max]= 100,000) and high-sensitive spectrograph WINERED, which is specifically customized for short NIR bands at 0.9-1.35 μm. WINERED employs the novelty in the optical system; a potable design and a warm optics without any cold stops. The planned astrometric space mission JASMINE will provide the exact positions, distances, and proper motions of the bulge stars. The missing components, the radial velocity and chemical compositions will be measured by WINERED with high accuracies (δV< 1km/s). These combined data brought by JASMINE and WINERED will certainly reveal the nature of the Galactic bulge. We plan to complete this instrument for the observation of a single object by the end of 2008 and hope to attach it to various 4-10m telescopes as a PI-type instrument. In succession, we will develop it to the design for a simultaneous multi-object spectroscopy.

  6. Pb+ irradiation of synthetic zircon (ZrSiO4): Infrared spectroscopic investigation - Reply

    SciTech Connect

    Zhang, Ming; Ewing, Rodney C.; Boatner, Lynn A.; Salje, E K H.; Weber, William J.; Daniel, Philippe; Zhang, Yanwen; Farnan, Ian E.

    2009-06-01

    We appreciate the opportunity to respond to the comment by Nasdala (2009) concerning our interpretation of infrared spectra used to investigate the change in the structure of Pb-irradiated zircon as a function of increasing fluence (Zhang et al. 2008a, 2008b). Nasdala is correct in cautioning experimentalists to carefully match the analytical technique to the expected irradiation damage profile in order to optimally probe the irradiation effects, and in fact, this point was emphasize by Ewing et al. (2003) in a review of radiation effects in zircon. However, Nasdala’s discussion fails to fully appreciate three important points: i) There is a difference between in situ irradiations of TEM samples that must be electron transparent, ~200 nm thick, as were completed by Weber et al. (1994), and more bulk-like irradiations that were completed in the Zhang et al. (2008a and 2008b) studies; ii) The particle-solid interactions change along the path of an implanted ion, that is the distribution and nature of the damage changes with depth as the ion loses energy, resulting in the greatest number of ballistic interactions near the end of the particle trajectory (see Figure 1 of Ewing et al. 2003); iii) In comparing natural zircon damaged by alpha-decay events with ion irradiated zircon, one must be aware that the recoil nucleus and the alpha particle cause different types of damage, and the use of the Pb-implantation experiment is meant to simulate only the alpha-recoil damage.

  7. Microstructural and Photoacoustic Infrared Spectroscopic Studies of Human Cortical Bone with Osteogenesis Imperfecta

    NASA Astrophysics Data System (ADS)

    Gu, Chunju; Katti, Dinesh R.; Katti, Kalpana S.

    2016-04-01

    The molecular basis of bone disease osteogenesis imperfecta (OI) and the mineralization of hydroxyapatite in OI bone have been of significant research interest. To further investigate the mechanism of OI disease and bone mineralization, Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy, and x-ray diffraction (XRD) are used in the present study to describe the structural and compositional differences between OI and healthy bone. OI bone exhibits more porous, fibrous features, abnormal collagen fibrils, and abnormal mineral deposits. Likewise, photoacoustic-FTIR experiments indicate an aberrant collagen structure and an altered mineral structure in OI. In contrast, there is neither significant difference in the non-collagenous proteins (NCPs) composition observed nor apparent change in the crystal structure between OI and healthy bone minerals as shown in XRD and energy-dispersive x-ray spectroscopy (EDS) results. This observation indicates that the biomineralization process is more controlled by the bone cells and non-collagenous phosphorylated proteins. The present study also confirms that there is an orientational influence on the stoichiometry of the mineral in OI bone. Also, a larger volume of the hydrated layer in the transverse plane than the longitudinal plane of the mineral crystal structure is proposed. The appearance of a new C-S band in the FTIR spectra in OI bone suggests the substitution of glycine by cysteine in collagen molecules or/and an increased amount of cysteine-rich osteonectin that relates to mineral nucleation and mineral crystal formation.

  8. A search for the infrared spectroscopic signature of hot Jupiter planets

    NASA Astrophysics Data System (ADS)

    Lucas, P. W.; Roche, P. F.

    2002-10-01

    We present the results of an attempt to detect the hottest `hot Jupiter' planets directly in the thermal infrared. A simple method based upon high signal-to-noise ratio spectroscopy of the central star at low spectral resolution is described. In the 2-4 μm region the contrast ratio between planet and star is expected to be relatively low and the planetary spectrum should appear as a faint signal on top of the stellar spectrum, distinguished by edges of H2O absorption. No water edges were found to 3σ limits of one part in a few hundred in each case. These upper limits are compared with the irradiated planetary atmosphere models of Barman, Hauschildt & Allard to derive upper limits on the size of the hot Jupiters, which are expected to be somewhat larger than Jupiter. If reasonably strong H2O absorption occurs in these objects then typical upper limits of R < 3 RJup are derived, the precision being limited by the stability of telluric transmission. Only a modest improvement in precision is needed (e.g. with space-based instruments) to reach the range of greatest interest (1 < R < 2 RJup).

  9. Spectroscopic signature of mouse embryonic stem cell-derived hepatocytes using synchrotron Fourier transform infrared microspectroscopy

    NASA Astrophysics Data System (ADS)

    Thumanu, Kanjana; Tanthanuch, Waraporn; Ye, Danna; Sangmalee, Anawat; Lorthongpanich, Chanchao; Parnpai, Rangsun; Heraud, Philip

    2011-05-01

    Stem cell-based therapy for liver regeneration has been proposed to overcome the persistent shortage in the supply of suitable donor organs. A requirement for this to succeed is to find a rapid method to detect functional hepatocytes, differentiated from embryonic stem cells. We propose Fourier transform infrared (FTIR) microspectroscopy as a versatile method to identify the early and last stages of the differentiation process leading to the formation of hepatocytes. Using synchrotron-FTIR microspectroscopy, the means of identifying hepatocytes at the single-cell level is possible and explored. Principal component analysis and subsequent partial least-squares (PLS) discriminant analysis is applied to distinguish endoderm induction from hepatic progenitor cells and matured hepatocyte-like cells. The data are well modeled by PLS with endoderm induction, hepatic progenitor cells, and mature hepatocyte-like cells able to be discriminated with very high sensitivity and specificity. This method provides a practical tool to monitor endoderm induction and has the potential to be applied for quality control of cell differentiation leading to hepatocyte formation.

  10. Infrared spectroscopic investigation of nuclear spin conversion in solid CH{sub 4}

    SciTech Connect

    Sugimoto, Takeru; Yamakawa, Koichiro Arakawa, Ichiro

    2015-12-14

    Infrared spectra of solid CH{sub 4} were studied in the ν{sub 3} and ν{sub 4} vibrational regions. The phase I crystal around 30 K showed broad absorption bands, whereas the phase II crystal at 6.9–10.3 K exhibited splitting of these bands after annealing above 20 K. The split peaks were assigned to the librating and almost freely rotating molecules in phase II on the basis of the peak spacings and time evolution of the peak intensities. From the quantitative analysis of the temporal changes of the R(0) and R(1) peak intensities, the relaxation rates of the numbers of molecules with J = 0 (I = 2) and J = 1 (I = 1) were determined in the temperature range of 6.9–10.3 K. We fitted the function resulting from a combination of direct and indirect relaxation processes mediated by phonons to the temperature dependence of these rates and obtained the activation energies of the indirect process: C ≃ 36 K. Since this value is higher than the energies of perturbed J = 2 states relative to the J = 1 state, we argue that the nuclear spin conversion through the J = 3 state also takes place.

  11. Stardust Interstellar Preliminary Examination III: Infrared spectroscopic analysis of interstellar dust candidates

    NASA Astrophysics Data System (ADS)

    Bechtel, Hans A.; Flynn, George J.; Allen, Carlton; Anderson, David; Ansari, Asna; Bajt, SašA.; Bastien, Ron K.; Bassim, Nabil; Borg, Janet; Brenker, Frank E.; Bridges, John; Brownlee, Donald E.; Burchell, Mark; Burghammer, Manfred; Butterworth, Anna L.; Changela, Hitesh; Cloetens, Peter; Davis, Andrew M.; Doll, Ryan; Floss, Christine; Frank, David R.; Gainsforth, Zack; Grün, Eberhard; Heck, Philipp R.; Hillier, Jon K.; Hoppe, Peter; Hudson, Bruce; Huth, Joachim; Hvide, Brit; Kearsley, Anton; King, Ashley J.; Lai, Barry; Leitner, Jan; Lemelle, Laurence; Leroux, Hugues; Leonard, Ariel; Lettieri, Robert; Marchant, William; Nittler, Larry R.; Ogliore, Ryan; Ong, Wei Ja; Postberg, Frank; Price, Mark C.; Sandford, Scott A.; Tresseras, Juan-Angel Sans; Schmitz, Sylvia; Schoonjans, Tom; Silversmit, Geert; Simionovici, Alexandre S.; Solé, Vicente A.; Srama, Ralf; Stadermann, Frank J.; Stephan, Thomas; Sterken, Veerle J.; Stodolna, Julien; Stroud, Rhonda M.; Sutton, Steven; Trieloff, Mario; Tsou, Peter; Tsuchiyama, Akira; Tyliszczak, Tolek; Vekemans, Bart; Vincze, Laszlo; von Korff, Joshua; Westphal, Andrew J.; Wordsworth, Naomi; Zevin, Daniel; Zolensky, Michael E.

    2014-09-01

    Under the auspices of the Stardust Interstellar Preliminary Examination, picokeystones extracted from the Stardust Interstellar Dust Collector were examined with synchrotron Fourier transform infrared (FTIR) microscopy to establish whether they contained extraterrestrial organic material. The picokeystones were found to be contaminated with varying concentrations and speciation of organics in the native aerogel, which hindered the search for organics in the interstellar dust candidates. Furthermore, examination of the picokeystones prior to and post X-ray microprobe analyses yielded evidence of beam damage in the form of organic deposition or modification, particularly with hard X-ray synchrotron X-ray fluorescence. From these results, it is clear that considerable care must be taken to interpret any organics that might be in interstellar dust particles. For the interstellar candidates examined thus far, however, there is no clear evidence of extraterrestrial organics associated with the track and/or terminal particles. However, we detected organic matter associated with the terminal particle in Track 37, likely a secondary impact from the Al-deck of the sample return capsule, demonstrating the ability of synchrotron FTIR to detect organic matter in small particles within picokeystones from the Stardust interstellar dust collector.

  12. A validated near-infrared spectroscopic method for methanol detection in biodiesel

    NASA Astrophysics Data System (ADS)

    Paul, Andrea; Bräuer, Bastian; Nieuwenkamp, Gerard; Ent, Hugo; Bremser, Wolfram

    2016-06-01

    Biodiesel quality control is a relevant issue as biodiesel properties influence diesel engine performance and integrity. Within the European metrology research program (EMRP) ENG09 project ‘Metrology for Biofuels’, an on-line/at-site suitable near-infrared spectroscopy (NIRS) method has been developed in parallel with an improved EN14110 headspace gas chromatography (GC) analysis method for methanol in biodiesel. Both methods have been optimized for a methanol content of 0.2 mass% as this represents the maximum limit of methanol content in FAME according to EN 14214:2009. The NIRS method is based on a mobile NIR spectrometer equipped with a fiber-optic coupled probe. Due to the high volatility of methanol, a tailored air-tight adaptor was constructed to prevent methanol evaporation during measurement. The methanol content of biodiesel was determined from evaluation of NIRS spectra by partial least squares regression (PLS). Both GC analysis and NIRS exhibited a significant dependence on biodiesel feedstock. The NIRS method is applicable to a content range of 0.1% (m/m) to 0.4% (m/m) of methanol with uncertainties at around 6% relative for the different feedstocks. A direct comparison of headspace GC and NIRS for samples of FAMEs yielded that the results of both methods are fully compatible within their stated uncertainties.

  13. Near-Infrared Spectroscopic Analysis of Total Phenolic Content and Antioxidant Activity of Berry Fruits

    PubMed Central

    Mihalev, Kiril; Bečić, Ivana; Polović, Ivana; Georgieva, Mariya; Djaković, Senka; Kurtanjek, Želimir

    2016-01-01

    Summary This study evaluates the feasibility of using near-infrared (NIR) spectroscopy as a rapid and environmentally friendly technique for validation and prediction of the total phenolic content (TPC) and antioxidant activity (AOA) indices (as 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging, inhibition time (IT) of the Briggs-Rauscher oscillating reaction, and relative antioxidant capacity (RAC)) of berry fruit extracts. The analysed berry samples originated from Croatia (blackberries, wild blueberries, raspberries, red currants and strawberries) and Bulgaria (wild blueberries, raspberries and strawberries). Principal component analysis and partial least squares (PLS) regression were used from the set of chemometric tools in distinguishing and validating the measured berry fruit extract. ANOVA and PCA showed no significant impact of the origin and freshness of the samples. PLS models were developed to validate the relationship of NIR spectra with TPC and AOA of berry fruits. Representativeness of the models was expressed with the R2 and the ratio of performance to deviation. Calculated R2 values were above 0.84 and the ratio of performance to deviation was between 1.8 and 3.1, indicating adequacy of the PLS models. PMID:27904414

  14. Infrared Spectroscope for Electron Bunch-length Measurement: Heat Sensor Parameters Analysis

    SciTech Connect

    Domgmo-Momo, Gilles; /Towson U. /SLAC

    2012-09-05

    The Linac Coherent Light Source (LCLS) is used for many experiments. Taking advantage of the free electron laser (FEL) process, scientists of various fields perform experiments of all kind. Some for example study protein folding; other experiments are more interested in the way electrons interact with the molecules before they are destroyed. These experiments among many others have very little information about the electrons x-ray produced by the FEL, except that the FEL is using bunches less than 10 femtoseconds long. To be able to interpret the data collected from those experiments, more accurate information is needed about the electron's bunch-length. Existing bunch length measurement techniques are not suitable for the measurement of such small time scales. Hence the need to design a device that will provide more precise information about the electron bunch length. This paper investigates the use of a pyreoelectric heat sensor that has a sensitivity of about 1.34 micro amps per watt for the single cell detector. Such sensitivity, added to the fact that the detector is an array sensor, makes the detector studied the primary candidate to be integrated to an infrared spectrometer designed to better measure the LCLS electron bunch length.

  15. In situ infrared spectroscopic study of forsterite carbonation in wet supercritical CO2.

    PubMed

    Loring, John S; Thompson, Christopher J; Wang, Zheming; Joly, Alan G; Sklarew, Deborah S; Schaef, H Todd; Ilton, Eugene S; Rosso, Kevin M; Felmy, Andrew R

    2011-07-15

    Carbonation reactions are central to the prospect of CO(2) trapping by mineralization in geologic reservoirs. In contrast to the relevant aqueous-mediated reactions, little is known about the propensity for carbonation in the key partner fluid: supercritical carbon dioxide containing dissolved water ("wet" scCO(2)). We employed in situ mid-infrared spectroscopy to follow the reaction of a model silicate mineral (forsterite, Mg(2)SiO(4)) for 24 h with wet scCO(2) at 50 °C and 180 atm. The results show a dramatic dependence of reactivity on water concentration and the presence of liquid water on the forsterite particles. Exposure to neat scCO(2) showed no detectable carbonation reaction. At 47% and 81% water saturation, an Ångstrom-thick liquid-like water film was detected on the forsterite particles and less than 1% of the forsterite transformed. Most of the reaction occurred within the first 3 h of exposure to the fluid. In experiments at 95% saturation and with an excess of water (36% above water saturation), a nanometer-thick water film was detected, and the carbonation reaction proceeded continuously with approximately 2% and 10% conversion, respectively. Our collective results suggest constitutive links between water concentration, water film formation, reaction rate and extent, and reaction products in wet scCO(2).

  16. Infrared spectroscopic investigation of nuclear spin conversion in solid CH4

    NASA Astrophysics Data System (ADS)

    Sugimoto, Takeru; Yamakawa, Koichiro; Arakawa, Ichiro

    2015-12-01

    Infrared spectra of solid CH4 were studied in the ν3 and ν4 vibrational regions. The phase I crystal around 30 K showed broad absorption bands, whereas the phase II crystal at 6.9-10.3 K exhibited splitting of these bands after annealing above 20 K. The split peaks were assigned to the librating and almost freely rotating molecules in phase II on the basis of the peak spacings and time evolution of the peak intensities. From the quantitative analysis of the temporal changes of the R(0) and R(1) peak intensities, the relaxation rates of the numbers of molecules with J = 0 (I = 2) and J = 1 (I = 1) were determined in the temperature range of 6.9-10.3 K. We fitted the function resulting from a combination of direct and indirect relaxation processes mediated by phonons to the temperature dependence of these rates and obtained the activation energies of the indirect process: C ≃ 36 K. Since this value is higher than the energies of perturbed J = 2 states relative to the J = 1 state, we argue that the nuclear spin conversion through the J = 3 state also takes place.

  17. In Situ Infrared Spectroscopic Study of Forsterite Carbonation in Wet Supercritical CO2

    SciTech Connect

    Loring, John S.; Thompson, Christopher J.; Wang, Zheming; Joly, Alan G.; Sklarew, Deborah S.; Schaef, Herbert T.; Ilton, Eugene S.; Rosso, Kevin M.; Felmy, Andrew R.

    2011-07-19

    Carbonation reactions are central to the prospect of CO2 trapping by mineralization in geologic reservoirs. In contrast to the relevant aqueous-mediated reactions, little is known about the propensity for carbonation in the long-term partner fluid: water-containing supercritical carbon dioxide (‘wet’ scCO2). We employed in situ mid-infrared spectroscopy to follow the reaction of a model silicate mineral (forsterite, Mg2SiO4) for 24 hr with wet scCO2 at 50°C and 180 atm, using water concentrations corresponding to 0%, 55%, 95%, and 136% saturation. Results show a dramatic dependence of reactivity on water concentration and the presence of liquid water on the forsterite particles. Exposure to neat scCO2 showed no detectable carbonation reaction. At 55% and 95% water saturation, a liquid-like thin water film was detected on the forsterite particles; less than 1% of the forsterite transformed, mostly within the first 3 hours of exposure to the fluid. At 136% saturation, where an (excess) liquid water film approximately several nanometers thick was intentionally condensed on the forsterite, the carbonation reaction proceeded continuously for 24 hr with 10% to 15% transformation. Our collective results suggest constitutive links between water concentration, water film formation, reaction rate and extent, and reaction products in wet scCO2.

  18. [Attenuated total reflection-fourier transform infrared spectroscopic study of dried shark fin products].

    PubMed

    Han, Wan-qing; Luo, Hai-ying; Xian, Yan-ping; Luo, Dong-hui; Mu, Torng-na; Guo, Xin-dong

    2015-02-01

    Sixty-four pieces of shark fin dried products (including real, fake and artificial shark fin products) and real products coated with gelatin were rapidly and nondestructively analyzed by attenuated total reflection-Fourier transform infrared spectroscopy (ATR-FTIR). The characteristic of IR spectrograms among the above four kinds of samples were systematically studied and comparied, the results showed that the spectrograms of the same kind of samples were repeatable, and different kinds of shark fin products presented significant differences in the spectrograms, which mainly manifested as the specific absorption peaks of amido bonds in protein (1650, 1544 cm(-1)) and skeletal vibration in polysaccharide (1050 cm(-1)). The spectrograms of real shark fins were characterized by the strong absorption peaks of protein characteristic amide I and II absorbent (1650, 1544 cm(-1)) and relatively weak C--O--C vibration absorbent (1050 cm(-1)) owing to the high content of protein and relatively low level of polysaccharide. For fake shark fin products that were molded form by mixing together with the offcut of shark, collagen and other substances, the introduction of non-protein materials leaded to the weaker amido bonds absorbent than real products along with a 30 cm(-1) blue shift of amide I absorbent. Opposite to the real sample, the relatively strong absorption peak of polysaccharide (approximately 1047 cm(-1)) and barely existed amide absorbent were the key features of the spectrogram of artificial samples, which was synthersized by polysaccharide like sodium alginate. Real samples coated with gelatin, the peak strength of protein and polysaccharide were decreased simultaneously when the data collection was taken at the surface of sample, while the spectrogram presented no significant difference to real samples when the data was collected in the section. The results above indicated that by analyzing the characteristic of IR spectrograms and the value range of Apro

  19. Chemometrics and visible-near infrared spectroscopic monitoring of red wine fermentation in a pilot scale.

    PubMed

    Cozzolino, Daniel; Parker, Mango; Dambergs, Robert G; Herderich, Markus; Gishen, Mark

    2006-12-20

    The modern wine industry needs tools for process control and quality assessment in order to better manage fermentation or bottling processes. During wine fermentation it is important to measure both substrate and product concentrations (e.g. sugars, phenolic compounds), however, the analysis of these compounds by traditional means requires sample preparation and in some cases several steps of purification are needed. The combination of visible/near-infrared (Vis/NIR) spectroscopy and chemometrics potentially provides an ideal solution to accurately and rapidly monitor physical or chemical changes in wine during processing without the need for chemical analysis. The aim of this study was to assess the possibility of combining spectral and multivariate techniques, such as principal component analysis (PCA), discriminant partial least squares (DPLS), or linear discriminant analysis (LDA), to monitor time-related changes that occur during red wine fermentation. Samples (n = 652) were collected at various times from several pilot scale fermentations with grapes from either Cabernet Sauvignon or Shiraz varieties, over three vintages (2001-2003) and scanned using a monochromator instrument (Foss-NIRSystems 6500, Silver Spring, MD) in transmission mode (400-2,500 nm). PCA was used to demonstrate consistent progressive spectral changes that occur through the time course of the fermentation. LDA using PCA scores showed that regardless of variety or vintage, samples belonging to a particular time point in fermentation could be correctly classified. This study demonstrates the potential of Vis/NIR spectroscopy combined with chemometrics, as a tool for the rapid monitoring of red wine fermentation.

  20. Near Infrared Spectroscopic Mapping of Functional Properties of Equine Articular Cartilage.

    PubMed

    Sarin, Jaakko K; Amissah, Michael; Brommer, Harold; Argüelles, David; Töyräs, Juha; Afara, Isaac O

    2016-11-01

    Mechanical properties of articular cartilage are vital for normal joint function, which can be severely compromised by injuries. Quantitative characterization of cartilage injuries, and evaluation of cartilage stiffness and thickness by means of conventional arthroscopy is poorly reproducible or impossible. In this study, we demonstrate the potential of near infrared (NIR) spectroscopy for predicting and mapping the functional properties of equine articular cartilage at and around lesion sites. Lesion and non-lesion areas of interests (AI, N = 44) of equine joints (N = 5) were divided into grids and NIR spectra were acquired from all grid points (N = 869). Partial least squares (PLS) regression was used to investigate the correlation between the absorbance spectra and thickness, equilibrium modulus, dynamic modulus, and instantaneous modulus at the grid points of 41 AIs. Subsequently, the developed PLS models were validated with spectral data from the grid points of 3 independent AIs. Significant correlations were obtained between spectral data and cartilage thickness (R (2) = 70.3%, p < 0.0001), equilibrium modulus (R (2) = 67.8%, p < 0.0001), dynamic modulus (R (2) = 68.9%, p < 0.0001) and instantaneous modulus (R (2) = 41.8%, p < 0.0001). Relatively low errors were observed in the predicted thickness (5.9%) and instantaneous modulus (9.0%) maps. Thus, if well implemented, NIR spectroscopy could enable arthroscopic evaluation and mapping of cartilage functional properties at and around lesion sites.

  1. Infrared spectroscopic examination of the interaction of urea with the naturally occurring zeolite clinoptilolite

    USGS Publications Warehouse

    Byler, D.M.; Gerasimowicz, W.V.; Stockette, V.M.; Eberl, D.D.

    1991-01-01

    Infrared spectroscopy has shown for the first time that the naturally occurring zeolite clinoptilolite can absorb urea, (NH2)2CO, under ambient conditions from either aqueous or ethanolic solutions. The two strongest NH stretching bands at 3441 and 3344 cm-1 in pure, solid urea shift to higher frequency (about 3504 and 3401 cm-1) after absorption. Two of the four urea bands in the 1800-1300 cm-1 range (at 1683 and 1467 cm-1) undergo marked downward shifts to about 1670 and 1445 cm-1. The other two bands show little change in frequency. The strong band at 1602 cm-1, however, diminishes in intensity to little more than an ill-defined shoulder on the 1626-cm-1 peak. When clinoptilolite is heated to 450 ??C and then treated with molten urea (ca. 140 ??C) for several minutes, and finally washed twice with ethanol to remove excess unreacted urea, further changes become apparent in the spectrum of the urea-treated clinoptilolite. The two NH stretching bands broaden without significant change in frequency. Two new bands appear in the midfrequency range at 1777 (weak) and 1719 (medium strong) cm-1. Of the four original midfrequency peaks, the one at 1602 cm-1 is now absent. Two others (1627 and 1440 cm-1) exhibit little change, while the fourth has broadened and shifted down to 1663 cm-1, where it appears as a shoulder on the band at 1627 cm-1. Both treatments clearly induce interaction between urea and the zeolite which seems to result in significant modifications in the nature of the hydrogen bonding of the substrate. ?? 1991.

  2. Spectroscopic follow-up of 70-μm sources in Spitzer Wide-area Infrared Extragalactic Legacy Survey

    NASA Astrophysics Data System (ADS)

    Patel, H.; Clements, D. L.; Rowan-Robinson, M.; Vaccari, M.

    2011-08-01

    We present spectroscopic follow-up observations of 70-μm selected galaxies from the Spitzer Wide-area InfraRed Extragalactic Survey XMM-LSS and Lockman Hole fields. We have measured spectroscopic redshifts for 293 new sources down to a 70 μm flux limit of 9 mJy and r < 22 mag. The redshift distribution peaks at z ˜ 0.3 and has a high redshift tail out to z = 3.5. We perform emission line diagnostics for 91 sources where [O III], Hβ, [N II], Hα and [S II] emission lines are available to determine their power source. We find in our sample 13 quasi-stellar objects, one type 2 Seyfert galaxy, 33 star-forming galaxies, 30 composite galaxies, five LINERs and 21 ambiguous galaxies. We fit single temperature dust spectral energy distributions (SEDs) to 81 70-μm sources with 160-μm photometry to estimate dust temperatures and masses. Assuming the dust emissivity factor (β) as 1.5, we determine dust temperatures in the range ˜20-60 K and dust masses with a range of 106-109 M⊙. Plotting these objects in the luminosity-temperature diagram suggests that these objects have lower dust temperatures than local IR luminous galaxies. The Herschel Space Observatory will be crucial in understanding the nature of these sources and to accurately determine the shape of the Rayleigh-Jeans tail of the dust SED. We then model SEDs from optical to far-IR (FIR) for each source using a set of galaxy and quasar templates in the optical and near-IR and with a set of dust emission templates [cirrus, M82 starburst, Arp 220 starburst and active galactic nucleus (AGN) dust torus] in the mid-IR to FIR. The numbers of objects fitted with each dust template are 57 Arp 220, 127 M82, nine cirrus, one AGN dust torus, 70 M82 and cirrus, 26 M82 and AGN dust torus, and three Arp 220 and AGN dust torus. We determine the total IR luminosity (LIR) in range 108-1015 L⊙ by integrating the SED models from 8 to 1000 μm.

  3. Predictions for imaging and spectroscopic surveys of galaxies and Active Galactic Nuclei in the mid-/far-Infrared

    NASA Astrophysics Data System (ADS)

    Bonato, Matteo

    2015-02-01

    While continuum imaging data at far-infrared to sub-millimeter wavelengths have provided tight constraints on the population properties of dusty star-forming galaxies up to high redshifts, future space missions like the Space Infra-Red Telescope for Cosmology and Astrophysics (SPICA) and ground based facilities like the Atacama Large Millimeter/submillimeter Array (ALMA) and the Cerro Chajnantor Atacama Telescope (CCAT) will allow detailed investigations of their physical properties via their mid-/far-infrared line emission. The goal of this thesis project was to carry out predictions for these spectroscopic surveys using both a phenomenological approach and physically grounded models. These predictions are useful to optimize the planning of the surveys. In the first part of the work, I present updated predictions for the number counts and the redshift distributions of star-forming galaxies spectroscopically detectable by these future missions. These predictions exploit a recent upgrade of evolutionary models, that includes the effect of strong gravitational lensing, in the light of the most recent Herschel and South Pole Telescope (SPT) data. Moreover the relations between line and continuum infrared luminosity are re-assessed, considering also differences among source populations, with the support of extensive simulations that take into account dust obscuration. My reference model for the redshift dependent IR luminosity functions is the one worked out by Cai et al. (2013) based on a comprehensive hybrid approach combining a physical model for the progenitors of early-type galaxies with a phenomenological one for late-type galaxies. The derived line luminosity functions are found to be highly sensitive to the spread of the line to continuum luminosity ratios. Estimates of the expected numbers of detections per spectral line by the SpicA FAR infrared Instrument (SAFARI) and by CCAT surveys for different integration times per field of view at fixed total observing

  4. Spectrum of excess partial molar absorptivity. I. Near infrared spectroscopic study of aqueous acetonitrile and acetone.

    PubMed

    Koga, Yoshikata; Sebe, Fumie; Minami, Takamasa; Otake, Keiko; Saitow, Ken-ichi; Nishikawa, Keiko

    2009-09-03

    We study the mixing schemes or the molecular processes occurring in aqueous acetonitrile (ACN) and acetone (ACT) by near-infrared spectroscopy (NIR). Both solutions (any other aqueous solutions) are not free from strong and complex intermolecular interactions. To tackle such a many-body problem, we first use the concept of the excess molar absorptivity, epsilonE, which is a function of solute mole fraction in addition to that of wavenumber, nu. The plots of epsilonE calculated from NIR spectra for both aqueous solutions against nu showed two clearly separated bands at 5020 and 5230 cm(-1); the former showed negative and the latter positive peaks. At zero and unity mole fractions of solute, epsilonE is identically zero independent of nu. Similar to the thermodynamic excess functions, both negative and positive bands grow in size from zero to the minimum (or the maximum) and back to zero, as the mole fraction varies from 0 to 1. Since the negative band's nu-locus coincides with the NIR spectrum of ice, and the positive with that of liquid H(2)O, we suggest that on addition of solute the "ice-likeness" decreases and the "liquid-likeness" increases, reminiscent of the two-mixture model for liquid H(2)O. The modes of these variations, however, are qualitatively different between ACN-H(2)O and ACT-H(2)O. The former ACN is known to act as a hydrophobe and ACT as a hydrophile from our previous thermodynamic studies. To see the difference more clearly, we introduced and calculated the excess partial molar absorptivity of ACN and ACT, epsilon(E)(N) and epsilon(E)(T), respectively. The mole fraction dependences of epsilon(E)(N) and epsilon(E)(T) show qualitatively different behavior and are consistent with the detailed mixing schemes elucidated by our earlier differential thermodynamic studies. Furthermore, we found in the H(2)O-rich region that the effect of hydrophobic ACN is acted on the negative band at 5020 cm(-1), while that of hydrophilic ACT is on the positive high

  5. Recognizing impact glass on Mars using surface texture, mechanical properties, and mid-infrared spectroscopic methods

    NASA Astrophysics Data System (ADS)

    Bradley, James Thomson

    breccias. In Part 4, systematic variations in glass mid-infrared reststrahlen band positions were determined with variations in glass chemistry, degree of crystallinity, and quench rate. Results indicate that the spectra of rapidly quenched glasses with a high fictive temperature exhibit shifts to shorter wavelengths, causing them to appear more silica-rich.

  6. Near-Infrared Spectroscopic Measurements of Calf Muscle during Walking at Simulated Reduced Gravity - Preliminary Results

    NASA Technical Reports Server (NTRS)

    Ellerby, Gwenn E. C.; Lee, Stuart M. C.; Stroud, Leah; Norcross, Jason; Gernhardt, Michael; Soller, Babs R.

    2008-01-01

    Consideration for lunar and planetary exploration space suit design can be enhanced by investigating the physiologic responses of individual muscles during locomotion in reduced gravity. Near-infrared spectroscopy (NIRS) provides a non-invasive method to study the physiology of individual muscles in ambulatory subjects during reduced gravity simulations. PURPOSE: To investigate calf muscle oxygen saturation (SmO2) and pH during reduced gravity walking at varying treadmill inclines and added mass conditions using NIRS. METHODS: Four male subjects aged 42.3 +/- 1.7 years (mean +/- SE) and weighing 77.9 +/- 2.4 kg walked at a moderate speed (3.2 +/- 0.2 km/h) on a treadmill at inclines of 0, 10, 20, and 30%. Unsuited subjects were attached to a partial gravity simulator which unloaded the subject to simulate body weight plus the additional weight of a space suit (121 kg) in lunar gravity (0.17G). Masses of 0, 11, 23, and 34 kg were added to the subject and then unloaded to maintain constant weight. Spectra were collected from the lateral gastrocnemius (LG), and SmO2 and pH were calculated using previously published methods (Yang et al. 2007 Optics Express ; Soller et al. 2008 J Appl Physiol). The effects of incline and added mass on SmO2 and pH were analyzed through repeated measures ANOVA. RESULTS: SmO2 and pH were both unchanged by added mass (p>0.05), so data from trials at the same incline were averaged. LG SmO2 decreased significantly with increasing incline (p=0.003) from 61.1 +/- 2.0% at 0% incline to 48.7 +/- 2.6% at 30% incline, while pH was unchanged by incline (p=0.12). CONCLUSION: Increasing the incline (and thus work performed) during walking causes the LG to extract more oxygen from the blood supply, presumably to support the increased metabolic cost of uphill walking. The lack of an effect of incline on pH may indicate that, while the intensity of exercise has increased, the LG has not reached a level of work above the anaerobic threshold. In these

  7. Infrared Spectroscopic Studies of OCS Trapped in Solid Parahydrogen: Indirect Evidence of Large Amplitude Motions

    NASA Astrophysics Data System (ADS)

    Anderson, David T.

    2016-06-01

    The high-resolution infrared rovibrational spectroscopy of OCS clustered with multiple hydrogen molecules has previously been studied in helium nanodroplets and in the gas-phase in search of another substance other than helium that displays superfluidity. Para-hydrogen (pH2) is one of the most likely candidates because it is a spinless (I=0) composite boson with a light mass similar to helium. However, compared to helium, the pH2-pH2 intermolecular potential is significantly stronger and thus pH2 solidifies at higher temperatures than the predicted superfluid transition temperature thereby blocking access to the superfluid state. Both of these previous studies reveal intriguing results linked to the microscopic details of superfluidity. We were therefore interested to characterize the IR spectrum of OCS in solid pH2. The conventional wisdom is that because pH2 solidifies into a quantum solid, the effects of superfluidity detected in the finite sized clusters should not be manifest in solid pH2. However, the OCS-H2 intermolecular potential strongly favors arranging the first 5 pH2 molecules in a ring around the equator of the OCS (R=3.2 Å). Isolation of OCS in bulk pH2 therefore may result in a solvation site where 6 pH2 molecules in the same basal plane form a ring around the OCS and are pulled inward decoupling them from the bulk. If the periodic barriers to motion around the ring are small, one might expect the 6 equatorial pH2 molecules to become delocalized while still maintaining the permutation symmetry of bosons. These 6 particles-on-a-ring may only show this behavior at low temperatures when thermal excitations are minimized. Analysis of the IR spectroscopy of OCS in solid pH2 indicates 1) the OCS molecule does not freely rotate and 2) there are at least two preferred OCS solvation sites. In principle, the measured OCS peak frequency for these two solvation sites should depend sensitively on the "structure" of the first pH2 solvation shell and therefore

  8. New spectroscopic tools and techniques for characterizing M dwarfs and discovering their planets in the near-infrared

    NASA Astrophysics Data System (ADS)

    Terrien, Ryan C.

    M dwarfs are the least massive and most common stars in the Galaxy. Due to their prevalence and long lifetimes, these diminutive stars play an outsize role in several fields of astronomical study. In particular, it is now known that they commonly host planetary systems, and may be the most common hosts of Earth-size, rocky planets in the habitable zone. A comprehensive understanding of M dwarfs is crucial for understanding the origins and conditions of their planetary systems, including their potential habitability. Such an understanding depends on methods for precisely and accurately measuring their properties. These tools have broader applicability as well, underlying the use of M dwarfs as fossils of Galactic evolution, and helping to constrain the structures and interiors of these stars. The measurement of the fundamental parameters of M dwarfs is encumbered by their spectral complexity. Unlike stars of spectral type F, G, or K that are similar to our G type Sun, whose spectra are dominated by continuum emission and atomic features, the cool atmospheres of M dwarfs are dominated by complex molecular absorption. Another challenge for studies of M dwarfs is that these stars are optically faint, emitting much of their radiation in the near-infrared (NIR). The availability and performance of NIR spectrographs have lagged behind those of optical spectrographs due to the challenges of producing low-noise, high-sensitivity NIR detector arrays, which have only recently become available. This thesis discusses two related lines of work that address these challenges, motivated by the development of the Habitable Zone Planet Finder (HPF), a NIR radial velocity (RV) spectrograph under development at Penn State that will search for and confirm planets around nearby M dwarfs. This work includes the development and application of new NIR spectroscopic techniques for characterizing M dwarfs, and the development and optimization of new NIR instrumentation for HPF. The first line

  9. Brown dwarf photospheres are patchy: A Hubble space telescope near-infrared spectroscopic survey finds frequent low-level variability

    SciTech Connect

    Buenzli, Esther; Apai, Dániel; Radigan, Jacqueline; Reid, I. Neill; Flateau, Davin

    2014-02-20

    Condensate clouds strongly impact the spectra of brown dwarfs and exoplanets. Recent discoveries of variable L/T transition dwarfs argued for patchy clouds in at least some ultracool atmospheres. This study aims to measure the frequency and level of spectral variability in brown dwarfs and to search for correlations with spectral type. We used Hubble Space Telescope/Wide Field Camera 3 to obtain spectroscopic time series for 22 brown dwarfs of spectral types ranging from L5 to T6 at 1.1-1.7 μm for ≈40 minutes per object. Using Bayesian analysis, we find six brown dwarfs with confident (p > 95%) variability in the relative flux in at least one wavelength region at sub-percent precision, and five brown dwarfs with tentative (p > 68%) variability. We derive a minimum variability fraction f{sub min}=27{sub −7}{sup +11}% over all covered spectral types. The fraction of variables is equal within errors for mid-L, late-L, and mid-T spectral types; for early-T dwarfs we do not find any confident variable but the sample is too small to derive meaningful limits. For some objects, the variability occurs primarily in the flux peak in the J or H band, others are variable throughout the spectrum or only in specific absorption regions. Four sources may have broadband peak-to-peak amplitudes exceeding 1%. Our measurements are not sensitive to very long periods, inclinations near pole-on and rotationally symmetric heterogeneity. The detection statistics are consistent with most brown dwarf photospheres being patchy. While multiple-percent near-infrared variability may be rare and confined to the L/T transition, low-level heterogeneities are a frequent characteristic of brown dwarf atmospheres.

  10. Mechanism controller system for the optical spectroscopic and infrared remote imaging system instrument on board the Rosetta space mission

    NASA Astrophysics Data System (ADS)

    Castro Marín, J. M.; Brown, V. J. G.; López Jiménez, A. C.; Rodríguez Gómez, J.; Rodrigo, R.

    2001-05-01

    The optical, spectroscopic infrared remote imaging system (OSIRIS) is an instrument carried on board the European Space Agency spacecraft Rosetta that will be launched in January 2003 to study in situ the comet Wirtanen. The electronic design of the mechanism controller board (MCB) system of the two OSIRIS optical cameras, the narrow angle camera, and the wide angle camera, is described here. The system is comprised of two boards mounted on an aluminum frame as part of an electronics box that contains the power supply and the digital processor unit of the instrument. The mechanisms controlled by the MCB for each camera are the front door assembly and a filter wheel assembly. The front door assembly for each camera is driven by a four phase, permanent magnet stepper motor. Each filter wheel assembly consists of two, eight filter wheels. Each wheel is driven by a four phase, variable reluctance stepper motor. Each motor, for all the assemblies, also contains a redundant set of four stator phase windings that can be energized separately or in parallel with the main windings. All stepper motors are driven in both directions using the full step unipolar mode of operation. The MCB also performs general housekeeping data acquisition of the OSIRIS instrument, i.e., mechanism position encoders and temperature measurements. The electronic design application used is quite new due to use of a field programmable gate array electronic devices that avoid the use of the now traditional system controlled by microcontrollers and software. Electrical tests of the engineering model have been performed successfully and the system is ready for space qualification after environmental testing. This system may be of interest to institutions involved in future space experiments with similar needs for mechanisms control.

  11. Mueller matrix imaging ellipsometry for nanostructure metrology.

    PubMed

    Liu, Shiyuan; Du, Weichao; Chen, Xiuguo; Jiang, Hao; Zhang, Chuanwei

    2015-06-29

    In order to achieve effective process control, fast, inexpensive, nondestructive and reliable nanometer scale feature measurements are extremely useful in high-volume nanomanufacturing. Among the possible techniques, optical scatterometry is relatively ideal due to its high throughput, low cost, and minimal sample damage. However, this technique is inherently limited by the illumination spot size of the instrument and the low efficiency in construction of a map of the sample over a wide area. Aiming at these issues, we introduce conventional imaging techniques to optical scatterometry and combine them with Mueller matrix ellipsometry based scatterometry, which is expected to be a powerful tool for the measurement of nanostructures in future high-volume nanomanufacturing, and propose to apply Mueller matrix imaging ellipsometry (MMIE) for nanostructure metrology. Two kinds of nanostructures were measured using an in-house developed Mueller matrix imaging ellipsometer in this work. The experimental results demonstrate that we can achieve Mueller matrix measurement and analysis for nanostructures with pixel-sized illumination spots by using MMIE. We can also efficiently construct parameter maps of the nanostructures over a wide area with pixel-sized lateral resolution by performing parallel ellipsometric analysis for all the pixels of interest.

  12. Built-in hyperspectral camera for smartphone in visible, near-infrared and middle-infrared lights region (second report): sensitivity improvement of Fourier-spectroscopic imaging to detect diffuse reflection lights from internal human tissues for healthcare sensors

    NASA Astrophysics Data System (ADS)

    Kawashima, Natsumi; Hosono, Satsuki; Ishimaru, Ichiro

    2016-05-01

    We proposed the snapshot-type Fourier spectroscopic imaging for smartphone that was mentioned in 1st. report in this conference. For spectroscopic components analysis, such as non-invasive blood glucose sensors, the diffuse reflection lights from internal human skins are very weak for conventional hyperspectral cameras, such as AOTF (Acousto-Optic Tunable Filter) type. Furthermore, it is well known that the spectral absorption of mid-infrared lights or Raman spectroscopy especially in long wavelength region is effective to distinguish specific biomedical components quantitatively, such as glucose concentration. But the main issue was that photon energies of middle infrared lights and light intensities of Raman scattering are extremely weak. For improving sensitivity of our spectroscopic imager, the wide-field-stop & beam-expansion method was proposed. Our line spectroscopic imager introduced a single slit for field stop on the conjugate objective plane. Obviously to increase detected light intensities, the wider slit width of the field stop makes light intensities higher, regardless of deterioration of spatial resolutions. Because our method is based on wavefront-division interferometry, it becomes problems that the wider width of single slit makes the diffraction angle narrower. This means that the narrower diameter of collimated objective beams deteriorates visibilities of interferograms. By installing the relative inclined phaseshifter onto optical Fourier transform plane of infinity corrected optical systems, the collimated half flux of objective beams derived from single-bright points on objective surface penetrate through the wedge prism and the cuboid glass respectively. These two beams interfere each other and form the infererogram as spatial fringe patterns. Thus, we installed concave-cylindrical lens between the wider slit and objective lens as a beam expander. We successfully obtained the spectroscopic characters of hemoglobin from reflected lights from

  13. Correcting the effect of refraction and dispersion of light in FT-IR spectroscopic imaging in transmission through thick infrared windows.

    PubMed

    Chan, K L Andrew; Kazarian, Sergei G

    2013-01-15

    Transmission mode is one of the most common sampling methods for FT-IR spectroscopic imaging because the spectra obtained generally have a reasonable signal-to-noise ratio. However, dispersion and refraction of infrared light occurs when samples are sandwiched between infrared windows or placed underneath a layer of liquid. Dispersion and refraction cause infrared light to focus with different focal lengths depending on the wavelength (wavenumber) of the light. As a result, images obtained are in focus only at a particular wavenumber while they are defocused at other wavenumber values. In this work, a solution to correct this spread of focus by means of adding a lens on top of the infrared transparent window, such that a pseudo hemisphere is formed, has been investigated. Through this lens (or pseudo hemisphere), refraction of light is removed and the light across the spectral range has the same focal depth. Furthermore, the lens acts as a solid immersion objective and an increase of both magnification and spatial resolution (by 1.4 times) is demonstrated. The spatial resolution was investigated using an USAF resolution target, showing that the Rayleigh criterion can be achieved, as well as a sample with a sharp polymer interface to indicate the spatial resolution that can be expected in real samples. The reported approach was used to obtain chemical images of cross sections of cancer tissue and hair samples sandwiched between infrared windows showing the versatility and applicability of the method. In addition to the improved spatial resolution, the results reported herein also demonstrate that the lens can reduce the effect of scattering near the edges of tissue samples. The advantages of the presented approach, obtaining FT-IR spectroscopic images in transmission mode with the same focus across all wavenumber values and simultaneous improvement in spatial resolution, will have wide implications ranging from studies of live cells to sorption of drugs into tissues.

  14. Characterization on Smart Optics Using Ellipsometry

    NASA Technical Reports Server (NTRS)

    Song, Kyo D.

    2002-01-01

    Recently, NASA Langley Research Center developed a smart active optical concept to filter narrow band pass or to control optical intensity. To characterize developed smart optics materials, we have measured thickness and reflection properties of the materials using a WVASE32 ellipsometry. This project allowed us to: (1) prepare the smart optical materials for measurement of thickness and optical properties at NASA Langley Research Center; (2) measure thickness and optical properties of the smart optical materials; (3) evaluate the measured properties in terms of applications for narrow band-pass filters. The outcomes of this research provide optical properties and physical properties of the smart optics on a selected spectral range. The applications of this development were used for field-controlled spectral smart filters.

  15. Automatic null ellipsometry with an interferometer

    SciTech Connect

    Watkins, Lionel R.

    2009-11-10

    A new approach to automatic null ellipsometry is described in which the analyzer of a traditional polarizer compensator sample analyzer (PCSA) null ellipsometer is replaced with a heterodyne Michelson interferometer. One arm of this interferometer is modified such that it produces a fixed, linearly polarized reference beam, irrespective of the input polarization state. This beam is recombined interferometrically with the measurement beam and spatially separated into its p and s polarizations. The relative phase of the resulting temporal fringes is a linear function of the polarizer azimuthal angle P, and thus this component can be driven to its null position without iteration. Once at null, the azimuthal angle of the reflected, linearly polarized light is trivially determined from the relative amplitude of the fringes. Measurements made with this instrument on a native oxide film on a silicon wafer were in excellent agreement with those made with a traditional PCSA null ellipsometer.

  16. Infrared spectroscopic method for analysis of Mg 2Ca(SO 4) 3 in mixtures with MgSO 4 and/or CaSO 4

    NASA Astrophysics Data System (ADS)

    Smith, Duane H.; Seshadri, Kal S.

    1999-04-01

    Mg 2Ca(SO 4) 3 is prepared from, and may be found in, mixtures with MgSO 4 and CaSO 4. Such mixtures frequently occur in the ash produced by various types of coal combustion, especially in filter cakes from pressurized fluidized bed combustion with dolomite as a SO x sorbent. Previously, qualitative analyses could be performed for Mg 2Ca(SO 4) 3 in these mixtures, but no quantitative analytical method was available. An infrared spectroscopic method has been developed that provides reasonably quantitative results for Mg 2Ca(SO 4) 3, MgSO 4,and CaSO 4 in their mixtures.

  17. ACCURATE SPECTROSCOPIC CHARACTERIZATION OF OXIRANE: A VALUABLE ROUTE TO ITS IDENTIFICATION IN TITAN’S ATMOSPHERE AND THE ASSIGNMENT OF UNIDENTIFIED INFRARED BANDS

    PubMed Central

    Puzzarini, Cristina; Biczysko, Malgorzata; Bloino, Julien; Barone, Vincenzo

    2015-01-01

    In an effort to provide an accurate spectroscopic characterization of oxirane, state-of-the-art computational methods and approaches have been employed to determine highly accurate fundamental vibrational frequencies and rotational parameters. Available experimental data were used to assess the reliability of our computations, and an accuracy on average of 10 cm−1 for fundamental transitions as well as overtones and combination bands has been pointed out. Moving to rotational spectroscopy, relative discrepancies of 0.1%, 2%–3%, and 3%–4% were observed for rotational, quartic, and sextic centrifugal-distortion constants, respectively. We are therefore confident that the highly accurate spectroscopic data provided herein can be useful for identification of oxirane in Titan’s atmosphere and the assignment of unidentified infrared bands. Since oxirane was already observed in the interstellar medium and some astronomical objects are characterized by very high D/H ratios, we also considered the accurate determination of the spectroscopic parameters for the mono-deuterated species, oxirane-d1. For the latter, an empirical scaling procedure allowed us to improve our computed data and to provide predictions for rotational transitions with a relative accuracy of about 0.02% (i.e., an uncertainty of about 40 MHz for a transition lying at 200 GHz). PMID:26543240

  18. Ultrafast dynamic ellipsometry and spectroscopies of laser shocked materials

    SciTech Connect

    Mcgrane, Shawn David; Bolme, Cindy B; Whitley, Von H; Moore, David S

    2010-01-01

    Ultrafast ellipsometry and transient absorption spectroscopies are used to measure material dynamics under extreme conditions of temperature, pressure, and volumetric compression induced by shock wave loading with a chirped, spectrally clipped shock drive pulse.

  19. Implementation of single-shot ellipsometry on gas gun experiments

    NASA Astrophysics Data System (ADS)

    Grant, Sean; Ao, Tommy; Bernstein, Aaron; Ditmire, Todd; Dolan, Dan; Lin, Jung-Fu; Seagle, Chris; Davis, Jean-Paul

    2017-01-01

    We have built and implemented a time-resolved ellipsometry diagnostic for dynamic material properties experiments at Sandia National Laboratories. This diagnostic measures the complex dielectric value of a sample experiencing dynamic compression, with a time resolution of a few nanoseconds. We show and discuss the dynamic ellipsometry measurements taken from shock loading experiments on a gas gun. This work is relevant to geophysical materials at high pressure-temperature conditions.

  20. Near-infrared diode laser based spectroscopic detection of ammonia: a comparative study of photoacoustic and direct optical absorption methods

    NASA Technical Reports Server (NTRS)

    Bozoki, Zoltan; Mohacsi, Arpad; Szabo, Gabor; Bor, Zsolt; Erdelyi, Miklos; Chen, Weidong; Tittel, Frank K.

    2002-01-01

    A photoacoustic spectroscopic (PAS) and a direct optical absorption spectroscopic (OAS) gas sensor, both using continuous-wave room-temperature diode lasers operating at 1531.8 nm, were compared on the basis of ammonia detection. Excellent linear correlation between the detector signals of the two systems was found. Although the physical properties and the mode of operation of both sensors were significantly different, their performances were found to be remarkably similar, with a sub-ppm level minimum detectable concentration of ammonia and a fast response time in the range of a few minutes.

  1. Infrared and infrared emission spectroscopic study of selected magnesium carbonate minerals containing ferric iron--implications for the geosequestration of greenhouse gases.

    PubMed

    Frost, Ray L; Bahfenne, Silmarilly; Graham, Jessica

    2008-12-15

    The proposal to remove greenhouse gases by pumping liquid carbon dioxide several kilometres below ground level implies that many carbonate containing minerals will be formed. Among these minerals, the formation of two hydrotalcite-like minerals coalingite and brugnatellite is possible, thus necessitating a study of such minerals and their thermal stability. The two such carbonate-bearing minerals brugnatellite and coalingite have been characterised by a combination of infrared and infrared emission spectroscopy. Infrared emission spectroscopy is most useful to determine the stability of these minerals. The infrared spectra of the OH stretching region are characterised by OH and water stretching vibrations. Intense (CO3)(2-) symmetric and antisymmetric stretching vibrations support the concept that the carbonate ion is distorted in these minerals. The position of the water bending vibration indicates that the water is strongly hydrogen bonded in the mineral structure. IES spectra show the temperature range of the thermal stability of these minerals.

  2. In situ mid-infrared spectroscopic titration of forsterite with water in supercritical CO2: Dependence of mineral carbonation on quantitative water speciation

    NASA Astrophysics Data System (ADS)

    Loring, J. S.; Thompson, C. J.; Wang, Z.; Schaef, H. T.; Martin, P.; Qafoku, O.; Felmy, A. R.; Rosso, K. M.

    2011-12-01

    Geologic sequestration of carbon dioxide holds promise for helping mitigate CO2 emissions generated from the burning of fossil fuels. Supercritical CO2 (scCO2) plumes containing variable water concentrations (wet scCO2) will displace aqueous solution and dominate the pore space adjacent to caprocks. It is important to understand possible mineral reactions with wet scCO2 to better predict long-term caprock integrity. We introduce novel in situ instrumentation that enables quantitative titrations of reactant minerals with water in scCO2 at temperatures and pressures relevant to target geologic reservoirs. The system includes both transmission and attenuated total reflection mid-infrared optics. Transmission infrared spectroscopy is used to measure concentrations of water dissolved in the scCO2, adsorbed on mineral surfaces, and incorporated into precipitated carbonates. Single-reflection attenuated total reflection infrared spectroscopy is used to monitor water adsorption, mineral dissolution, and carbonate precipitation reactions. Results are presented for the infrared spectroscopic titration of forsterite (Mg2SiO4), a model divalent metal silicate, with water in scCO2 at 100 bar and at both 50 and 75°C. The spectral data demonstrate that the quantitative speciation of water as either dissolved or adsorbed is important for understanding the types, growth rates, and amounts of carbonate precipitates formed. Relationships between dissolved/adsorbed water, water concentrations, and the role of liquid-like adsorbed water are discussed. Our results unify previous in situ studies from our laboratory based on infrared spectroscopy, nuclear magnetic resonance spectroscopy and X-ray diffraction.

  3. Built-in hyperspectral camera for smartphone in visible, near-infrared and middle-infrared lights region (third report): spectroscopic imaging for broad-area and real-time componential analysis system against local unexpected terrorism and disasters

    NASA Astrophysics Data System (ADS)

    Hosono, Satsuki; Kawashima, Natsumi; Wollherr, Dirk; Ishimaru, Ichiro

    2016-05-01

    The distributed networks for information collection of chemical components with high-mobility objects, such as drones or smartphones, will work effectively for investigations, clarifications and predictions against unexpected local terrorisms and disasters like localized torrential downpours. We proposed and reported the proposed spectroscopic line-imager for smartphones in this conference. In this paper, we will mention the wide-area spectroscopic-image construction by estimating 6 DOF (Degrees Of Freedom: parallel movements=x,y,z and rotational movements=θx, θy, θz) from line data to observe and analyze surrounding chemical-environments. Recently, smartphone movies, what were photographed by peoples happened to be there, had worked effectively to analyze what kinds of phenomenon had happened around there. But when a gas tank suddenly blew up, we did not recognize from visible-light RGB-color cameras what kinds of chemical gas components were polluting surrounding atmospheres. Conventionally Fourier spectroscopy had been well known as chemical components analysis in laboratory usages. But volatile gases should be analyzed promptly at accident sites. And because the humidity absorption in near and middle infrared lights has very high sensitivity, we will be able to detect humidity in the sky from wide field spectroscopic image. And also recently, 6-DOF sensors are easily utilized for estimation of position and attitude for UAV (Unmanned Air Vehicle) or smartphone. But for observing long-distance views, accuracies of angle measurements were not sufficient to merge line data because of leverage theory. Thus, by searching corresponding pixels between line spectroscopic images, we are trying to estimate 6-DOF in high accuracy.

  4. High-resolution in-die metrology using beam profile reflectometry and ellipsometry

    NASA Astrophysics Data System (ADS)

    Jun, Chungsam; Park, Jangik; Opsal, Jon; Pois, Heath; Kim, In-Kyo; Kim, Jung-Wook; Nicolaides, Lena

    2007-03-01

    A new application for ultra-fast and repeatable in-die determination of CD structures at the ~1 μm length scale using BPR®/BPE® (Beam Profile Reflectometry/Ellipsometry) technologies on an Opti-Probe OP9000 series system, is presented and summarized. Two structures were measured and analyzed, including a poly-silicon CD standard and an advanced poly-silicon recessed structure relevant to advanced memory devices. A focused beam spot (~1 μm) and "fast BPR" data acquisition capability (~17 ms) were utilized to perform high-resolution scans across wafer and within single die regions. Rotating Compensator Spectroscopic Ellipsometry (RCSE®) signals were also used to independently determine and compare to BPR results from data collected over larger areas (~15 μm). The BPR/BPE and SE results for line CD were found to have high correlation. Further, model regression for SE data coupled with an artificial neural network model and fast BPR were utilized to measure and calculate 10,000 points across a 1 mm2 area in a matter of minutes. Overall, the results were found to be repeatable and correlated well to CD-SEM analysis.

  5. Study of surfaces using near infrared optical fiber spectrometry

    NASA Technical Reports Server (NTRS)

    Workman, G. L.; Arendale, W. A.; Hughes, C.

    1995-01-01

    The measurement and control of cleanliness for critical surfaces during manufacturing and in service provides a unique challenge for fulfillment of environmentally benign operations. Of particular interest has been work performed in maintaining quality in the production of bondline surfaces in propulsion systems and the identification of possible contaminants. This work requires an in-depth study of the possible sources of contamination, methodologies to identify contaminants, discrimination between contaminants and chemical species caused by environment, and the effect of particular contaminants on the bondline integrity of the critical surfaces. This presentation will provide an introduction to the use of optical fiber spectrometry in a nondestructive measurement system for process monitoring and how it can be used to help clarify issues concerning surface chemistry. Correlation of the Near Infrared (NIR) spectroscopic results with Optical Stimulated Electron Emission (OSEE) and ellipsometry will also be presented.

  6. Mauna Kea Observatory infrared observations

    NASA Technical Reports Server (NTRS)

    Jefferies, J. T.

    1974-01-01

    Galactic and solar system infrared observations are reported using a broad variety of radiometric and spectroscopic instrumentation. Infrared programs and papers published during this period are listed.

  7. Mid-infrared and near-infrared spectroscopic study of selected magnesium carbonate minerals containing ferric iron-Implications for the geosequestration of greenhouse gases.

    PubMed

    Frost, Ray L; Reddy, B Jagannadha; Bahfenne, Silmarilly; Graham, Jessica

    2009-04-01

    The proposal to remove greenhouse gases by pumping liquefied CO(2) several kilometres below the ground implies that many carbonate containing minerals will be formed. Among these minerals brugnatellite and coalingite are probable. Two ferric ion bearing minerals brugnatellite and coalingite with a hydrotalcite-like structure have been characterised by a combination of infrared and near-infrared (NIR) spectroscopy. The infrared spectra of the OH stretching region are characterised by OH and water stretching vibrations. Both the first and second fundamental overtones of these bands are observed in the NIR spectra in the 7030-7235 cm(-1) and 10,490-10,570 cm(-1) regions. Intense (CO(3))(2-) symmetric and antisymmetric stretching vibrations support the concept that the carbonate ion is distorted. The position of the water bending vibration indicates the water is strongly hydrogen bonded in the mineral structure. Split NIR bands at around 8675 and 11,100 cm(-1) indicate that some replacement of magnesium ions by ferrous ions in the mineral structure has occurred. Near-infrared spectroscopy is ideal for the assessment of the formation of carbonate minerals.

  8. Fast IR laser mapping ellipsometry for the study of functional organic thin films.

    PubMed

    Furchner, Andreas; Sun, Guoguang; Ketelsen, Helge; Rappich, Jörg; Hinrichs, Karsten

    2015-03-21

    Fast infrared mapping with sub-millimeter lateral resolution as well as time-resolved infrared studies of kinetic processes of functional organic thin films require a new generation of infrared ellipsometers. We present a novel laboratory-based infrared (IR) laser mapping ellipsometer, in which a laser is coupled to a variable-angle rotating analyzer ellipsometer. Compared to conventional Fourier-transform infrared (FT-IR) ellipsometers, the IR laser ellipsometer provides ten- to hundredfold shorter measurement times down to 80 ms per measured spot, as well as about tenfold increased lateral resolution of 120 μm, thus enabling mapping of small sample areas with thin-film sensitivity. The ellipsometer, equipped with a HeNe laser emitting at about 2949 cm(-1), was applied for the optical characterization of inhomogeneous poly(3-hexylthiophene) [P3HT] and poly(N-isopropylacrylamide) [PNIPAAm] organic thin films used for opto-electronics and bioapplications. With the constant development of tunable IR laser sources, laser-based infrared ellipsometry is a promising technique for fast in-depth mapping characterization of thin films and blends.

  9. Built-in hyperspectral camera for smartphone in visible, near-infrared and middle-infrared lights region (first report): trial products of beans-size Fourier-spectroscopic line-imager and feasibility experimental results of middle-infrared spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Ishimaru, Ichiro; Kawashima, Natsumi; Hosono, Satsuki

    2016-05-01

    We had already proposed and reported the little-finger size hyperspectral-camera that was able to be applied to visible and infrared lights. The proposed method has been expected to be mounted on smartphones for healthcare sensors, and unmanned air vehicles such as drones for antiterrorism measures or environmental measurements. In this report, we will mention the trial product of the thumb size apparatus whose lens diameter was 5[mm]. The proposed Fourier spectroscopic imager is a kind of wavefront-division and common-path phase-shift interferometers. We installed the relative inclined phase-shifter onto optical Fourier transform plane of infinity corrected optical systems. The infinity corrected optical systems was configured with an objective lens and a cylindrical imaging lens. The relative inclined phase-shifter, what was made from a thin glass less than 0.3[mm] thick, had the wedge-prism and cuboid-glass region, because half surface of a thin glass was polished at an oblique angle of around 1[deg.]. The collimated half flux of objective beams derived from single-bright points on objective surface penetrate through the wedge prism and the cuboid glass respectively. These two beams are interfered each other and form the infererogram as spatial fringe patterns. In this case, the horizontal axis on 2-dimensional light receiving device is assigned to the amount of phase-shift. And also the vertical axis is assigned to the imaging coordinates on a line view field. Thus, by installing thin phase-shifter onto optical Fourier transform plane, the line spectroscopic imager, what obtains 1 dimensional spectral character distributions, were able to be realized.

  10. In situ ellipsometry of Cu surfaces immersed in benzotriazole-hydrogen peroxide solutions

    NASA Astrophysics Data System (ADS)

    Kondoh, Eiichi; Kawakami, Tatsuya; Watanabe, Mitsuhiro; Jin, Lianhua; Hamada, Satomi; Shima, Shohei; Hiyama, Hirokuni

    2016-06-01

    In the chemical mechanical polishing (CMP) of Cu, the Cu surface is oxidized and is concurrently removed by the mechanical function of an abrasive. Surface oxidation can lead to severe surface corrosion, and to prevent this, a corrosion inhibitor is added to slurries. Accurate understanding of the competition between oxidation and passivation is essential for advanced Cu CMP technologies. In this work, layer formation on clean Cu surfaces in benzotriazole (BTA), H2O2, and BTA-H2O2 aqueous solutions was studied by in situ spectroscopic ellipsometry. Time changes of ellipsometric parameters are discussed with respect to BTA and H2O2 concentrations. It was found that the BTA adsorbs onto the Cu surface and the adsorbed BTA transforms into a Cu-BTA complex in about 3 min after the onset of adsorption. The BTA/complex layer passivates the Cu surface against oxidation by H2O2.

  11. Fourier Transform Infrared (FT-IR) Spectroscopic Imaging Analysis of Partially Miscible PMMA-PEG Blends Using Two-Dimensional Disrelation Mapping.

    PubMed

    Shinzawa, Hideyuki; Mizukado, Junji; Kazarian, Sergei G

    2016-09-28

    A novel technique called disrelation spectroscopic imaging describes the process of identifying an area where a coordinated or out-of-phase change in pattern of spectral absorbance occurs. Disrelation mapping can be viewed as a spatial filter based on the well-established two-dimensional (2D) correlation function to highlight specific areas where disrelated variation occurs between ν1 and ν2 Disrelation intensity develops only if the spectral absorbance measured at ν1 and ν2 vary out of phase with each other within a specific spatial area. The disrelation mapping locates regions where absorbance varies in a dissimilar manner because of the contribution from species of different physical or chemical origins. Consequently, it becomes possible to probe onset of molecular interactions or presence of intermediate forms between components, which is not fully detected by the conventional visualizations based on a single wavenumber. Data analysis using disrelation mapping applied to Fourier transform infrared (FT-IR) spectroscopic images is presented in this study. Data sets of FT-IR spectroscopic images of blends of poly(methyl methacrylate) (PMMA) and polyethylene glycol (PEG) were subjected to the disrelation mapping. It was found that the disrelation intensity between 1730 and 1714 cm(-1) becomes especially acute around the spatial boundary between PMMA and PEG domains within the studied blend sample. Thus the band at 1730 cm(-1) most likely represents the C=O stretching mode of the C=O···H-O species due to the intermolecular hydrogen bonding between PMMA and PEG. The appearance of such disrelation is more noticeable in the PEG-rich region, for the PEG with low molecular weight. Consequently, it suggests that the blends of PMMA and PEG are partially miscible at the molecular level and these intermolecular interactions are affected by the quantity of the terminal -OH groups of the PEG.

  12. Assessment of natural radioactivity and function of minerals in soils of Yelagiri hills, Tamilnadu, India by Gamma Ray spectroscopic and Fourier Transform Infrared (FTIR) techniques with statistical approach

    NASA Astrophysics Data System (ADS)

    Chandrasekaran, A.; Ravisankar, R.; Rajalakshmi, A.; Eswaran, P.; Vijayagopal, P.; Venkatraman, B.

    2015-02-01

    Gamma Ray and Fourier Transform Infrared (FTIR) spectroscopic techniques were used to evaluate the natural radioactivity due to natural radionuclides and mineralogical characterization in soils of Yelagiri hills, Tamilnadu, India. Various radiological parameters were calculated to assess the radiation hazards associated with the soil. The distribution pattern of activity due to natural radionuclides is explained by Kriging method of mapping. Using FTIR spectroscopic technique the minerals such as quartz, microcline feldspar, orthoclase feldspar, kaolinite, montmorillonite, illite, and organic carbon were identified and characterized. The extinction coefficient values were calculated to know the relative distribution of major minerals such as quartz, microcline feldspar, orthoclase feldspar and kaolinite. The calculated values indicate that the amount of quartz is higher than orthoclase feldspar, microcline feldspar and much higher than kaolinite. Crystallinity index was calculated to know the crystalline nature of quartz. The result indicates that the presence of disordered crystalline quartz in soils. The relation between minerals and radioactivity was assessed by multivariate statistical analysis (Pearson's correlation and cluster analysis). The statistical analysis confirms that the clay mineral kaolinite and non-clay mineral quartz is the major factor than other major minerals to induce the important radioactivity variables and concentrations of uranium and thorium.

  13. Mueller-matrix ellipsometry studies of optically active structures in scarab beetles

    NASA Astrophysics Data System (ADS)

    Järrendahl, K.; Landin, J.; Arwin, H.

    2010-06-01

    The complexity of multilayers, photonic crystals, metamaterials and other artificial materials has promoted the use of spectroscopic, variable angle, generalized and Mueller-matrix ellipsometry. Naturally occurring structures may show even higher complexity than artificial structures but with a more narrow range of constituent materials. Fascinating reflection properties result from intricate photonic structures in, for instance, the wing scales and cuticles of insects. Currently there is a large interest to explore such functional supramolecular architectures for exploitation in nanotechnology. In this study, Mueller-matrix spectroscopic ellipsometry is applied in the spectral range of 250 to 1000 nm to investigate optical response and structures of the cuticle of Scarab beetles of the Cetoniinae subfamily. The cuticle of Cetonia aurata (the rose chafer, la cétoine dorée) is green with a metallic appearance and reflects left-handed circular/elliptically polarized light. It has been suggested that the polarization of this metallic gloss is caused by a helical structure in the chitinous cuticle. We find that the polarization effect is limited to the narrow spectral range 470-550 nm whereas for shorter or longer wavelengths the reflection properties are similar to those from a near-dielectric material. Model calculations and parameterization of the nanostructure employing a heliocoidal structure are discussed. As a comparison the polarization effects from light reflected from two other beetles will be presented. Coptomia laevis has a similar appearance as Cetonia aurata but has very different polarization properties. The golden Plusiotis argentiola has very interesting properties showing both left and right-handed polarization depending on incidence angle and wavelength.

  14. Expanded beam spectro-ellipsometry for big area on-line monitoring

    NASA Astrophysics Data System (ADS)

    Fried, M.; Major, C.; Juhasz, G.; Petrik, P.; Horvath, Z.

    2015-05-01

    Non-destructive analysing tools are needed at all stages of thin film process-development, especially photovoltaic (PV) development, and on production lines. In the case of thin films, layer thicknesses, micro-structure, composition, layer optical properties, and their uniformity are important parameters. An important focus is to express the dielectric functions of each component material in terms of a handful of wavelength independent parameters whose variation can cover all process variants of that material. With the resulting database, spectroscopic ellipsometry coupled with multilayer analysis can be developed for on-line point-by-point mapping and on-line line-by-line imaging. Off-line point-by-point mapping can be effective for characterization of non-uniformities in full scale PV panels or big area (even 450 mm diameter) Si-wafers in developing labs but it is slow in the on-line mode when only 15 points can be obtained (within 1 min) as a 120 cm long panel moves by the mapping station. Last years [M. Fried et al, Thin Solid Films 519, 2730 (2011)], a new instrumentation was developed that provides a line image of spectroscopic ellipsometry (wl=350- 1000 nm) data. Earlier a single 30 point line image could be collected in 10 s over a 15 cm width of PV material. Recent years we have built a 30, a 45 and a 60 cm width expanded beam ellipsometer which speed is increased by 10x. Now, 1800 points can be mapped in a 1 min traverse of a 60*120 cm PV panel or flexible roll-to-roll substrate.

  15. Diffraction Ellipsometry Studies on Insect Flight Muscle

    NASA Astrophysics Data System (ADS)

    Shen, Sui

    Characterization of the orientation and distribution of myosin cross-bridge at rigor, relax, low ionic strength (36 mM) and activation (pCa 4.3) conditions are of great interest since these states have been proposed to be transient steps in the cyclical interaction of myosin heads with actin during contraction. Measurements sensitive to the cross-bridge orientation in chemically skinned single muscle fibers of the insect, Lethocerus collossicus have been performed under various physiological conditions using laser diffraction ellipsometry. Determination of both the total birefringence, Deltan, and the differential field ratio, rm DFR (defined as {E_parallel -E_|over E_parallel-E _|}),is necessary for complete characterization of the optical polarization state. For rigor insect fiber, the birefringence value was close to the value we obtained from chemically skinned frog muscle fibers. However, the differential field ratio, DFR, was a negative value for insect fiber, while we always measured a positive value from frog muscle fibers. Polarization states of light diffracted from fibers exhibited a dependence on configurations of structural proteins at different conditions: fluid index matching using o-toluidine, alpha -chymotrypsin cleavage, KCl myosin extraction, rigor state, relaxed state, exogenous S-1 binding on rigor fiber, low ionic strength state, activation state at resting or stretched length. Results of our data analysis suggested that: (1) the negative DFR value of the insect flight muscle was contributed by alpha-actinin arranged perpendicular to the fiber axis in the Z-line, (2) in rigor fiber, 70% of myosin heads are doubly bound (45^circ and 90^ circ) while the rest of 30% are in single head binding configuration (90^circ), (3) myosin heads are randomly oriented in relaxed fiber, (4) mean axial angle is about 62^ circ for exogenous myosin heads binding on rigor fiber, (5) at low ionic strength, 25% of the total myosin heads are weakly attached to actin

  16. Determining Concentration of Nanoparticles from Ellipsometry

    NASA Technical Reports Server (NTRS)

    Venkatasubbarao, Srivatsa; Kempen, Lothar U.; Chipman, Russell

    2008-01-01

    A method of using ellipsometry or polarization analysis of light in total internal reflection of a surface to determine the number density of gold nanoparticles on a smooth substrate has been developed. The method can be modified to enable determination of densities of sparse distributions of nanoparticles in general, and is expected to be especially useful for measuring gold-nanoparticle-labeled biomolecules on microarrays. The method is based on theoretical calculations of the ellipsometric responses of gold nanoparticles. Elements of the calculations include the following: For simplicity, the gold nanoparticles are assumed to be spherical and to have the same radius. The distribution of gold nanoparticles is assumed to be a sub-monolayer (that is, sparser than a monolayer). The optical response of the sub-monolayer is modeled by use of a thin-island-film theory, according to which the polarizabilities parallel and perpendicular to the substrate are functions of the wavelength of light, the dielectric functions (permittivities expressed as complex functions of frequency or wavelength) of the gold and the suspending medium (in this case, the suspending medium is air), the fraction of the substrate area covered by the nanoparticles, and the radius of the nanoparticles. For the purpose of the thin-island-film theory, the dielectric function of the gold nanoparticles is modeled as the known dielectric function of bulk gold plus a correction term that is necessitated by the fact that the mean free path length for electrons in gold decreases with decreasing radius, in such a manner as to cause the imaginary part of the dielectric function to increase with decreasing radius (see figure). The correction term is a function of the nanoparticle radius, the wavelength of light, the mean free path and the Fermi speed of electrons in bulk gold, the plasma frequency of gold, and the speed of light in a vacuum. These models are used to calculate ellipsometric responses for

  17. Diffraction Ellipsometry Studies of Skeletal Muscle Structure

    NASA Astrophysics Data System (ADS)

    Kerr, William Lloyd

    Many of the techniques used to study the structure and contraction mechanism of muscle rely on the interaction of light or other electromagnetic radiation with the muscle. Some of the most important of these techniques are light and electron microscopy, x-ray diffraction, spectroscopy of muscle fibers "labelled" with spin or fluorescent probes, visible spectrum diffraction, and transmission birefringence. Chapter I of this dissertation reviews these techniques, focussing on what they have to tell us about muscle structure. In Chapter II, we discuss experiments in which the microstructural features of relaxed, skinned fibers compressed with polyvinylpyrollidone were examined by optical diffraction ellipsometry. The change in polarization state of light after interacting with the muscle is described by the differential field ratio (DFR) and birefringence (Deltan). Compression of single fibers with 0%-21% PVP caused an increase in up to 23% and 31% for DFR and Deltan, respectively. Theoretical modelling suggests that the average S-1 tilt angle may be reduced upon compression of the filament lattice. This is supported by experiments in which S-1 was cleaved with alpha-chymotrypsin. Experiments comparing fibers with intact membranes and skinned fibers compressed to an equivalent lattice spacing showed little difference in DFR or Deltan. Chapter III deals with experiments on contracting, intact fibers. The differential field ratio (DFR) was monitored for tetanically contracting muscle fibers subject to rapid (<0.4 msec) release or stretch. Upon stimulation, DFR decreases 14% from its resting value; the half-time for the decrease leads that of tension rise by 10 msecs. This suggests that the movement of cross -bridges precedes tension development and that the average cross-bridge angle is more perpendicular in the contracting state. Upon rapid release of 0.5% of the fiber length, DFR decreases 9.5% further simultaneous with the length step. Rapid and slow recovery phases

  18. Near-infrared spectroscopic evaluation of single kernel deoxynivalenol accumulation and Fusarium head blight resistance components in wheat

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fusarium head blight (FHB) symptoms, single kernel deoxynivalenol (DON) levels, and distribution of DON levels among kernels were investigated in wheat cultivars that had different levels of FHB resistance. DON levels were estimated using near-infrared spectroscopy (NIRS). The percentage of DON-co...

  19. Determination of the Vibrational Constants of Some Diatomic Molecules: A Combined Infrared Spectroscopic and Quantum Chemical Third Year Chemistry Project.

    ERIC Educational Resources Information Center

    Ford, T. A.

    1979-01-01

    In one option for this project, the rotation-vibration infrared spectra of a number of gaseous diatomic molecules were recorded, from which the fundamental vibrational wavenumber, the force constant, the rotation-vibration interaction constant, the equilibrium rotational constant, and the equilibrium internuclear distance were determined.…

  20. Infrared spectroscopic investigation of two isomers of the weakly bound complex OCS-(CO2)2.

    PubMed

    Oliaee, J Norooz; Mivehvar, F; Dehghany, M; Moazzen-Ahmadi, N

    2010-12-16

    Vibration-rotation spectra of the OCS-(CO(2))(2) van der Waals complex were studied by means of direct infrared absorption spectroscopy. Complexes were generated in a supersonic slit-jet apparatus, and the expansion gas was probed using a rapid-scan tunable diode laser. Infrared bands were observed for two different isomeric forms of the complex. A relatively strong band centered at 2058.799 cm(-1) was assigned to the most stable isomer, which has a barrel-shaped geometry and is already known from microwave spectroscopy. A weaker infrared band centered at 2050.702 cm(-1) was assigned to a new isomeric form, observed here for the first time, which was expected on the basis of ab initio calculations. Infrared bands for seven isotopomers were recorded in an attempt to quantify the structure of the new isomer. Because it has no symmetry elements, nine parameters are needed to fully define the geometry. It was possible to determine six of these which define the relative position of the OCS monomer with respect to the CO(2) dimer fragment in the complex while the remaining three were fixed at their ab initio values. Similarities and differences between the faces of the two isomers of OCS-(CO(2))(2) and the associated dimers are discussed.

  1. Infrared dielectric anisotropy and phonon modes of rutile TiO2

    NASA Astrophysics Data System (ADS)

    Schöche, S.; Hofmann, T.; Korlacki, R.; Tiwald, T. E.; Schubert, M.

    2013-04-01

    Spectroscopic ellipsometry in the mid-infrared and far-infrared spectral range and generalized ellipsometry in the mid-infrared spectral range are used to investigate the anisotropic dielectric response of rutile TiO2. The ordinary and extraordinary dielectric function tensor components and all infrared active phonon mode parameters of single crystalline rutile TiO2 are determined with high accuracy for wavelengths from 3 μm to 83 μm. The data were acquired from samples of (001), (100), and (111) surfaces cut from bulk single crystals. A factorized model dielectric function is employed in order to determine the frequencies and damping parameters of the transverse and longitudinal phonon modes with A2u and Eu symmetries. The bands of total reflection of s- and p-polarized light in dependence of the angle of incidence for highly symmetric sample cuts and orientations are derived. Excellent agreement with phonon modes reported in literature is obtained. Introduction of two additional modes for ordinary as well as extraordinary component of the dielectric function tensor was necessary to most accurately match the experimental data. The spectral position of the additional modes is compared to the calculated phonon density of states. The low-frequency dielectric constants are calculated from the determined phonon mode parameters and the high-frequency dielectric constants by applying the Lyddanne-Sachs-Teller relation. The presented data revise existing infrared optical function data and will be suitable for interpretation of any kind of infrared spectra for bulk TiO2 single crystal substrates, thin films, and TiO2 nanostructures.

  2. Comment on "A spectroscopic comparison of selected Chinese kaolinite, coal bearing kaolinite and halloysite - A mid-infrared and near-infrared study" and "Infrared and infrared emission spectroscopic study of typical Chinese kaolinite and halloysite" by Hongfei Cheng et al. (2010)

    NASA Astrophysics Data System (ADS)

    Kloprogge, J. Theo

    2015-02-01

    In two papers Cheng et al. (2010) reported in this journal on the mid-infrared, near-infrared and infrared emission spectroscopy of a halloysite from Hunan Xianrenwan, China. This halloysite contains around 8% of quartz (SiO2) and nearly 9% gibbsite (Al(OH)3). In their interpretation of the spectra these impurities were completely ignored. Careful comparison with a phase pure halloysite from Southern Belgium, synthetic gibbsite, gibbsite from Minas Gerais, and quartz show that these impurities do have a marked influence on the mid-infrared and infrared emission spectra. In the near-infrared, the effect is much less pronounced. Quartz does not show bands in this region and the gibbsite bands will be very weak. Comparison still show that the presence of gibbsite does contribute to the overall spectrum and bands that were ascribed to the halloysite alone do coincide with those of gibbsite.

  3. Comment on "A spectroscopic comparison of selected Chinese kaolinite, coal bearing kaolinite and halloysite--a mid-infrared and near-infrared study" and "Infrared and infrared emission spectroscopic study of typical Chinese kaolinite and halloysite" by Hongfei Cheng et al. (2010).

    PubMed

    Kloprogge, J Theo

    2015-02-05

    In two papers Cheng et al. (2010) reported in this journal on the mid-infrared, near-infrared and infrared emission spectroscopy of a halloysite from Hunan Xianrenwan, China. This halloysite contains around 8% of quartz (SiO2) and nearly 9% gibbsite (Al(OH)3). In their interpretation of the spectra these impurities were completely ignored. Careful comparison with a phase pure halloysite from Southern Belgium, synthetic gibbsite, gibbsite from Minas Gerais, and quartz show that these impurities do have a marked influence on the mid-infrared and infrared emission spectra. In the near-infrared, the effect is much less pronounced. Quartz does not show bands in this region and the gibbsite bands will be very weak. Comparison still show that the presence of gibbsite does contribute to the overall spectrum and bands that were ascribed to the halloysite alone do coincide with those of gibbsite.

  4. Determination of the weight percentage gain and of the acetyl group content of acetylated wood by means of different infrared spectroscopic methods.

    PubMed

    Stefke, Barbara; Windeisen, Elisabeth; Schwanninger, Manfred; Hinterstoisser, Barbara

    2008-02-15

    The weight percentage gain (WPG) and the acetyl group content of wood due to acetylation with acetic anhydride have been analyzed by means of Fourier transform infrared spectroscopy (FTIR) and near-infrared spectroscopy (NIR). Band height ratios (BHR) (1240/1030 (1230/1030) and 1745/1030 (1740/1030)) of the bands at 1745 (1740), 1240 (1230), and 1030 cm-1 were calculated from FTIR-KBr and FTIR-ATR (attenuated total reflection) spectra. The good linear correlation with a coefficient of determination of about 0.94 over a range from 0 to 27% WPG existing between BHRs and WPG and acetyl group content, respectively, requires only a few samples to calibrate FTIR. Partial least-squares regression models based on second derivatives of the NIR spectra in the wavenumber range from 6080 to 5760 cm-1 resulted in a R2 value of 0.99, number of PLS components (rank) between 3 and 5, root-mean-square error of cross-validation between 0.6 and 0.79%, and a residual prediction deviation up to 10. Although a wide range of input parameters (i.e., various wood species and different procedures of acetylation) was used, highly satisfactory results were obtained. Both FTIR and NIR spectroscopic means fulfill the need for determining the WPG and the acetyl content of acetylated wood. By reason of its additional potential for on-line process control, the NIR method may even outperform the FTIR method.

  5. A rapid Fourier-transform infrared (FTIR) spectroscopic method for direct quantification of paracetamol content in solid pharmaceutical formulations

    NASA Astrophysics Data System (ADS)

    Mallah, Muhammad Ali; Sherazi, Syed Tufail Hussain; Bhanger, Muhammad Iqbal; Mahesar, Sarfaraz Ahmed; Bajeer, Muhammad Ashraf

    2015-04-01

    A transmission FTIR spectroscopic method was developed for direct, inexpensive and fast quantification of paracetamol content in solid pharmaceutical formulations. In this method paracetamol content is directly analyzed without solvent extraction. KBr pellets were formulated for the acquisition of FTIR spectra in transmission mode. Two chemometric models: simple Beer's law and partial least squares employed over the spectral region of 1800-1000 cm-1 for quantification of paracetamol content had a regression coefficient of (R2) of 0.999. The limits of detection and quantification using FTIR spectroscopy were 0.005 mg g-1 and 0.018 mg g-1, respectively. Study for interference was also done to check effect of the excipients. There was no significant interference from the sample matrix. The results obviously showed the sensitivity of transmission FTIR spectroscopic method for pharmaceutical analysis. This method is green in the sense that it does not require large volumes of hazardous solvents or long run times and avoids prior sample preparation.

  6. Infrared

    NASA Astrophysics Data System (ADS)

    Vollmer, M.

    2013-11-01

    'Infrared' is a very wide field in physics and the natural sciences which has evolved enormously in recent decades. It all started in 1800 with Friedrich Wilhelm Herschel's discovery of infrared (IR) radiation within the spectrum of the Sun. Thereafter a few important milestones towards widespread use of IR were the quantitative description of the laws of blackbody radiation by Max Planck in 1900; the application of quantum mechanics to understand the rotational-vibrational spectra of molecules starting in the first half of the 20th century; and the revolution in source and detector technologies due to micro-technological breakthroughs towards the end of the 20th century. This has led to much high-quality and sophisticated equipment in terms of detectors, sources and instruments in the IR spectral range, with a multitude of different applications in science and technology. This special issue tries to focus on a few aspects of the astonishing variety of different disciplines, techniques and applications concerning the general topic of infrared radiation. Part of the content is based upon an interdisciplinary international conference on the topic held in 2012 in Bad Honnef, Germany. It is hoped that the information provided here may be useful for teaching the general topic of electromagnetic radiation in the IR spectral range in advanced university courses for postgraduate students. In the most general terms, the infrared spectral range is defined to extend from wavelengths of 780 nm (upper range of the VIS spectral range) up to wavelengths of 1 mm (lower end of the microwave range). Various definitions of near, middle and far infrared or thermal infrared, and lately terahertz frequencies, are used, which all fall in this range. These special definitions often depend on the scientific field of research. Unfortunately, many of these fields seem to have developed independently from neighbouring disciplines, although they deal with very similar topics in respect of the

  7. In situ infrared and mass spectroscopic study of the reaction of WF6 with hydrogenated amorphous silicon

    NASA Astrophysics Data System (ADS)

    Wadayama, Toshimasa; Shibata, Hironobu; Ohtani, Tsutomu; Hatta, Aritada

    1992-08-01

    The reaction process of tungsten hexafluoride (WF6) with photochemically deposited hydrogenated amorphous silicon was studied by polarization modulation infrared spectroscopy and quadruple mass spectrometry. Infrared absorption bands due to species (SiH3 and SiH2) incorporated in the hydrogenated amorphous silicon were decreased in intensity during exposure of WF6. The reduction rate was faster for the SiH3 species than for the SiH2 species. The mass spectrometric analysis revealed that evolution of hydrogen into the gas phase took place prior to that of silicon fluorides. These results strongly suggest that WF6 reacts preferentially with the SiH3 species present in the hydrogen-rich surface layer.

  8. Infrared and Raman spectroscopic characterization of the carbonate bearing silicate mineral aerinite - Implications for the molecular structure

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; Scholz, Ricardo; López, Andrés

    2015-10-01

    The mineral aerinite is an interesting mineral because it contains both silicate and carbonate units which is unusual. It is also a highly colored mineral being bright blue/purple. We have studied aerinite using a combination of techniques which included scanning electron microscopy, energy dispersive X-ray analysis, Raman and infrared spectroscopy. Raman bands at 1049 and 1072 cm-1 are assigned to the carbonate symmetric stretching mode. This observation supports the concept of the non-equivalence of the carbonate units in the structure of aerinite. Multiple infrared bands at 1354, 1390 and 1450 cm-1 supports this concept. Raman bands at 933 and 974 cm-1 are assigned to silicon-oxygen stretching vibrations. Multiple hydroxyl stretching and bending vibrations show that water is in different molecular environments in the aerinite structure.

  9. Far- and mid-infrared spectroscopic analysis of the substrate-induced structural dynamics of respiratory complex I.

    PubMed

    Hielscher, Ruth; Friedrich, Thorsten; Hellwig, Petra

    2011-01-17

    The catalytic activity of the respiratory NADH:ubiquinone oxidoreductase (complex I) is based on conformational reorganizations. Herein we probe the effect of substrates on the conformational flexibility of complex I by means of (1)H/(2)H exchange kinetics at the level of the amide proton in the mid-infrared spectral range (1700-1500 cm(-1)). Slow, medium, and fast exchanging domains are distinguished that reveal different accessibilities to the solvent. Whereas amide hydrogens undergo rapid exchange with the solvent in an open structure, hydrogens experience much slower exchange when they are involved in H-bonded structures or when they are sterically inaccessible for the solvent. The results indicate a structure that is more open in the presence of both NADH and quinon. Complementary information on the overall internal hydrogen bonding of the protein was probed in the far infrared (300-30 cm(-1)), a spectral range that includes a continuum mode of the hydrogen bonding signature.

  10. On-line preferential solvation studies of polymers by coupled chromatographic-Fourier transform infrared spectroscopic flow-cell technique.

    PubMed

    Malanin, M; Eichhorn, K-J; Lederer, A; Treppe, P; Adam, G; Fischer, D; Voigt, D

    2009-12-18

    Qualitative and quantitative comparison between liquid chromatography (LC) and LC coupled with Fourier transform infrared spectroscopy (LC-FTIR) to evaluate preferential solvation phenomenon of polymers in a mixed solvent has been performed. These studies show that LC-FTIR technique leads to detailed structural information without the requirement for determination of additional parameters for quantitative analysis except calibration. Appropriate experimental conditions for preferential solvation study have been established by variation of polymer concentration, molar mass and eluent content.

  11. Infrared-optical spectroscopy of transparent conducting perovskite (La,Ba)SnO{sub 3} thin films

    SciTech Connect

    Seo, Dongmin; Yu, Kwangnam; Jun Chang, Young; Choi, E. J.; Sohn, Egon; Hoon Kim, Kee

    2014-01-13

    We have performed optical transmission, reflection, spectroscopic ellipsometry, and Hall effect measurements on the electron-doped La{sub x}Ba{sub 1–x}SnO{sub 3} (x = 0.04) transparent thin films. From the infrared Drude response and plasma frequency analysis we determine the effective mass of the conducting electron m* = 0.35m{sub 0}. In the visible-UV region the optical band gap shifts to high energy in (La,Ba)SnO{sub 3} by 0.18 eV compared with undoped BaSnO{sub 3} which, in the context of the Burstein-Moss analysis, is consistent with the infrared-m*. m* of BaSnO{sub 3} is compared with other existing transparent conducting oxides (TCO), and implication on search for high-mobility TCO compounds is discussed.

  12. Mid-infrared spectroscopic characterisation of an ultra-broadband tunable EC-QCL system intended for biomedical applications

    NASA Astrophysics Data System (ADS)

    Vahlsing, T.; Moser, H.; Grafen, M.; Nalpantidis, K.; Brandstetter, M.; Heise, H. M.; Lendl, B.; Leonhardt, S.; Ihrig, D.; Ostendorf, A.

    2015-07-01

    Mid-infrared spectroscopy has been successfully applied for reagent-free clinical chemistry applications. Our aim is to design a portable bed-side system for ICU patient monitoring, based on mid-infrared absorption spectra of continuously sampled body-fluids. Robust and miniature bed-side systems can be achieved with tunable external cavity quantum cascade lasers (EC-QCL). Previously, single EC-QCL modules covering a wavenumber interval up to 250 cm-1 have been utilized. However, for broader applicability in biomedical research an extended interval around the mid-infrared fingerprint region should be accessible, which is possible with at least three or four EC-QCL modules. For such purpose, a tunable ultra-broadband system (1920 - 780 cm-1, Block Engineering) has been studied with regard to its transient emission characteristics in ns time resolution during different laser pulse widths using a VERTEX 80v FTIR spectrometer with step-scan option. Furthermore, laser emission line profiles of all four incorporated EC-QCL modules have been analysed at high spectral resolution (0.08 cm-1) and beam profiles with few deviations from the TEM 00 spatial mode have been manifested. Emission line reproducibility has been tested for various wavenumbers in step tune mode. The overall accuracy of manufacturer default wavenumber setting has been found between ± 3 cm-1 compared to the FTIR spectrometer scale. With regard to an application in clinical chemistry, theoretically achievable concentration accuracies for different blood substrates based on blood plasma and dialysate spectra previously recorded by FTIRspectrometers have been estimated taking into account the now accessible extended wavenumber interval.

  13. State of water molecules and silanol groups in opal minerals: a near infrared spectroscopic study of opals from Slovakia

    NASA Astrophysics Data System (ADS)

    Boboň, Miroslav; Christy, Alfred A.; Kluvanec, Daniel; Illášová, L'udmila

    2011-12-01

    Recently, near infrared spectroscopy in combination with double derivative technique has been effectively used by Christy (Vib Spectrosc 54:42-49, 2010) to study and differentiate between free and hydrogen bonded silanol groups on silica gel surface. The method has given some insight into the type of functionalities, their location in silica gel samples, and the way the water molecules bind onto the silanol groups. The important information in this respect comes from the overtones of the OH groups of water molecules hydrogen-bonded to free silanol groups, and hydrogen-bonded silanol groups absorbing in the region 5,500-5,100 cm-1. Chemically, opal minerals are hydrated silica and the same approach was adapted to study the state of water molecules, silanol functionalities, and their locations in opal samples from Slovakia. Twenty opal samples classified into CT and A classes and one quartz sample were used in this work. The samples were crushed using a hydraulic press and powderized. Each sample was then subjected to evacuation process to remove surface-adsorbed water at 200°C, and the near infrared spectrum of each sample was measured using a Perkin Elmer NTS FT-NIR spectrometer equipped with a transflectance accessory and a DTGS detector. The samples were also heated to 750°C to remove the hydrogen-bonded silanol groups on the surface to reveal their locality. Second derivative profiles of the near infrared reflectance spectra were obtained using the instrument's software and used in the detailed analysis of the samples. The analysis of the near infrared spectra and their second derivative profiles had the aim in finding relationships between the surface chemical structure and the classification of opal samples. The dry opal samples were also tested for their surface adsorption effectivity toward water molecules. The results indicate that the opal samples contain (1) surface-adsorbed water, (2) free and hydrogen-bonded silanol groups on the surface, (3) trapped

  14. A mid-infrared spectroscopic atlas of local active galactic nuclei on sub-arcsecond resolution using GTC/CanariCam

    NASA Astrophysics Data System (ADS)

    Alonso-Herrero, A.; Esquej, P.; Roche, P. F.; Ramos Almeida, C.; González-Martín, O.; Packham, C.; Levenson, N. A.; Mason, R. E.; Hernán-Caballero, A.; Pereira-Santaella, M.; Alvarez, C.; Aretxaga, I.; López-Rodríguez, E.; Colina, L.; Díaz-Santos, T.; Imanishi, M.; Rodríguez Espinosa, J. M.; Perlman, E.

    2016-01-01

    We present an atlas of mid-infrared (mid-IR) ˜ 7.5-13 μm spectra of 45 local active galactic nuclei (AGN) obtained with CanariCam on the 10.4 m Gran Telescopio CANARIAS (GTC) as part of an ESO/GTC large programme. The sample includes Seyferts and other low-luminosity AGN (LLAGN) at a median distance of 35 Mpc and luminous AGN, namely PG quasars, (U)LIRGs, and radio galaxies (RG) at a median distance of 254 Mpc. To date, this is the largest mid-IR spectroscopic catalogue of local AGN at sub-arcsecond resolution (median 0.3 arcsec). The goal of this work is to give an overview of the spectroscopic properties of the sample. The nuclear 12 μm luminosities of the AGN span more than four orders of magnitude, νL12 μm ˜ 3 × 1041-1046 erg s-1. In a simple mid-IR spectral index versus strength of the 9.7 μm silicate feature diagram most LLAGN, Seyfert nuclei, PG quasars, and RGs lie in the region occupied by clumpy torus model tracks. However, the mid-IR spectra of some might include contributions from other mechanisms. Most (U)LIRG nuclei in our sample have deeper silicate features and flatter spectral indices than predicted by these models suggesting deeply embedded dust heating sources and/or contribution from star formation. The 11.3 μm polycyclic aromatic hydrocarbon (PAH) feature is clearly detected in approximately half of the Seyfert nuclei, LLAGN, and (U)LIRGs. While the RG, PG quasars, and (U)LIRGs in our sample have similar nuclear νL12 μm, we do not detect nuclear PAH emission in the RGs and PG quasars.

  15. Co-treatment of fruit and vegetable waste in sludge digesters: Chemical and spectroscopic investigation by fluorescence and Fourier transform infrared spectroscopy.

    PubMed

    Provenzano, Maria Rosaria; Cavallo, Ornella; Malerba, Anna Daniela; Di Maria, Francesco; Cucina, Mirko; Massaccesi, Luisa; Gigliotti, Giovanni

    2016-04-01

    In a previous work co-digestion of food waste and sewage sludge was performed in a pilot apparatus reproducing operating conditions of an existing full scale digester and processing waste mixed sludge (WMS) and fruit and vegetable waste (FVW) at different organic loading rates. An analysis of the relationship among bio-methane generation, process stability and digestate phytotoxicity was conducted. In this paper we considered humification parameters and spectroscopic analysis. Humification parameters indicated a higher not humified fraction (NH) and a lower degree of humification (DH) of FVW with respect to WMS (NH=19.22 and 5.10%; DH=36.65 and 61.94% for FVW and WMS, respectively) associated with their different chemical compositions and with the stabilization process previously undergone by sludge. FVW additions seemed to be favourable from an agronomical point of view since a lower percentage of organic carbon was lost. Fourier transform infrared spectra suggested consumption of aliphatics associated with rising in bio-methane generation followed by accumulation of aliphatics and carboxylic acids when the biogas production dropped. The trend of peaks ratios can be used as an indicator of the process efficiency. Fluorescence intensity of peak B associated with tryptophan-like substances and peak D associated with humic-like substances observed on tridimensional Excitation Emission Matrix maps increased up to sample corresponding to the highest rate of biogas production. Overall spectroscopic results provided evidence of different chemical pathways of anaerobic digestion associated with increasing amount of FVW which led to different levels of biogas production.

  16. Quantitative infrared spectroscopic analysis of SF 6 decomposition products obtained by electrical partial discharges and sparks using PLS-calibrations

    NASA Astrophysics Data System (ADS)

    Kurte, R.; Heise, H. M.; Klockow, D.

    2001-05-01

    Infrared spectroscopy is a powerful tool for the analysis of gaseous by-products in sulfur hexafluoride gas used as an insulator in high-voltage equipment. Sparks and electrical partial discharges were generated between different point-plane configurations within a custom-made discharge chamber constructed from stainless steel and Teflon ®. Various electrode materials were used such as stainless steel, copper, aluminium, silver, tungsten and tungsten/copper alloy. Owing to the different electrical conditions, a wide concentration range of the decomposition products existed. The main-products found were the sulfuroxyfluorides SOF 4 and SOF 2, as well as HF following experiments with partial discharges and sparking with energies around 1.0 J/spark. All infrared spectra were recorded using an FTIR-spectrometer equipped with a 10 cm gas cell. Quantification was carried out using classical least-squares and partial least-squares (PLS) with multivariate spectral data from selected intervals. PLS calibration models were also optimised under the constraint of a minimum number of spectral variables with a view to developing simple photometers based on a restricted number of laser wavelengths. Standard errors of prediction obtained by cross-validation of different PLS calibration models are reported for the compounds mentioned, as well as for SF 4, SO 2F 2 and SiF 4.

  17. Matrix infrared spectroscopic and computational studies on the reactions of osmium and iron atoms with carbon monoxide and dinitrogen mixtures.

    PubMed

    Lu, Zhang-Hui; Xu, Qiang

    2011-10-06

    Reactions of laser-ablated osmium and iron atoms with CO and N(2) mixtures in excess neon have been investigated using matrix isolation infrared spectroscopy. The (NN)(x)MCO (M = Os, Fe; x = 1, 2) complexes are formed as reaction products during sample deposition and on annealing. These reaction products are characterized on the basis of the results of isotopic substitution, mixed isotopic splitting patterns, stepwise annealing, broad-band irradiation, and change of reagent concentration and laser energy. Density functional theory calculations have been performed on these products. Overall agreement between the experimental and calculated results supports the identification of these species from the matrix infrared spectra. The bonding characteristics and reaction mechanisms have been discussed. The M-C bonds are stronger than the M-N bonds in the same molecules. The formation of metal carbonyl dinitrogen complexes from the addition of CO to metal dinitrogen complexes is found to be more energetically favorable than that from the reactions of N(2) with metal carbonyls.

  18. Infrared spectroscopic study of the effect of oleic acid on the deliquescence behaviour of ammonium sulfate aerosol particles.

    PubMed

    Nájera, Juan J; Horn, Andrew B

    2009-01-21

    In order to accurately assess the impact of fatty acids on the hygroscopic properties of atmospheric aerosol particles, (NH4)2SO4 (ammonium sulfate) and oleic acid (cis-9-octadecenoic acid) were chosen to perform this study as components of the particle phase. Micron-sized (700-900 nm) particles containing (NH4)2SO4 and oleic acid were generated by nebulising aqueous solutions of (NH4)2SO4 and sodium oleate. In this study, the effect of oleic acid on the deliquescence phase transition of particles was investigated in a room temperature aerosol flow tube (AFT) system using Fourier transform infrared (FTIR) spectroscopy. Particles morphologies and their chemical compositions were also analysed using a variety of techniques, including attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy and scanning electron microscopy/energy dispersive X-ray analysis (SEM/EDX). The deliquescence relative humidity (DRH) of the (NH4)2SO4 component, determined at 81+/-2%, was slightly lowered or not affected by the presence of different thickness of oleic acid (21 nm, 44 nm and 109 nm) present in the particles. Analyses of the results presented here are consistent with earlier studies about the possible effects of water-insoluble fatty acids coatings on the phase transitions of atmospheric aerosol particles.

  19. Hydrogen bonding interactions in ethanol and acetonitrile binary system: A near and mid-infrared spectroscopic study

    NASA Astrophysics Data System (ADS)

    Zhou, Yu; Zheng, Yan-Zhen; Sun, Hai-Yuan; Deng, Geng; Yu, Zhi-Wu

    2014-07-01

    The hydrogen bond interactions in C2H5OHsbnd CH3CN binary system have been studied in detail by near-infrared spectroscopy (NIR), attenuated total reflection (ATR) mid-infrared spectroscopy (mid-IR), and density functional theory (DFT) calculations. The collected spectra were analyzed with excess spectroscopy and two-dimensional correlation spectroscopy (2D-COS) including moving-window 2D-COS. The main conclusions are: (1) A number of species, namely multimer, trimmer, and dimer of C2H5OH, and C2H5OH⋯CD3CN hydrogen bonding complex, have been identified in the binary system C2H5OHsbnd CH3CN experimentally. The linear relationship between the observed and calculated wavenumbers of the concerned species assisted us in doing the assignments. (2) Adding acetonitrile, the hydrogen bonds in C2H5OH are weakened and C2H5OH multimers dissociate. Meanwhile, C2H5OH dimers and C2H5OH⋯CD3CN hydrogen bonding complex form, and the former also transform to the latter. The dissociation of C2H5OH multimers slows down gradually during the dilution process and at the mole fraction 0.7 of acetonitrile, all the C2H5OH multimers have dissociated.

  20. A label-free approach by infrared spectroscopic imaging for interrogating the biochemistry of diabetic nephropathy progression.

    PubMed

    Varma, Vishal K; Kajdacsy-Balla, Andre; Akkina, Sanjeev K; Setty, Suman; Walsh, Michael J

    2016-05-01

    Routine histology, the current gold standard, involves staining for specific biomolecules. However, untapped biochemical information in tissue can be gathered using biochemical imaging. Infrared spectroscopy is an emerging modality that allows label-free chemical imaging to derive biochemical information (such as protein, lipids, DNA, collagen) from tissues. Here we employed this technology in order to better predict the development of diabetic nephropathy. Using human primary kidney biopsies or nephrectomies, we obtained tissue from 4 histologically normal kidneys, 4 histologically normal kidneys from diabetic subjects, and 5 kidneys with evidence of diabetic nephropathy. A biochemical signature of diabetic nephropathy was derived that enabled prediction of nephropathy based on the ratio of only 2 spectral frequencies. Nonetheless, using the entire spectrum of biochemical information, we were able to detect renal disease with near-perfect accuracy. Additionally, study of sequential protocol biopsies from 3 transplanted kidneys showed biochemical changes even prior to clinical manifestation of diabetic nephropathy. Thus, infrared imaging can identify critical biochemical alterations that precede morphologic changes, potentially allowing for earlier intervention.

  1. In situ infrared reflection absorption spectroscopic characterization of sustained kinetic oscillations in the Pt(100)/NO+CO system

    NASA Astrophysics Data System (ADS)

    Magtoto, Noel P.; Richardson, Hugh H.

    1998-11-01

    We have excited kinetic oscillations in the Pt(100)/NO+CO system at 470 K and pressure region around 2×10 -4 Torr. These oscillations are sustained and they arise by simply adjusting the partial pressures of NO and CO while holding the surface temperature at 470 K. However, they can only be induced if the partial pressure of CO is greater than that of NO (i.e., 1.4±0.05< pCO/ pNO<1.7±0.04). Infrared reflection-absorption spectra (IRAS) collected during the oscillation showed that the periodic growth and decay of the CO band are counterphase to the reaction-rate oscillations. Infrared bands due to molecularly adsorbed NO were not found during the early stages of the temporal evolution of the system into the upper reaction-rate branch. However, during the later stages of the evolution, a single IR band due to chemisorbed NO was observed. This band eventually disappeared as the reaction rate finally reached its maximum value. With the use of the model by Fink et al., we were able to rationalize the occurrence of oscillations under the present experimental conditions. Oscillations are caused by the periodic change in the level of adsorbate coverages that controls the dissociation of NO.

  2. Time-resolved and spatially-resolved infrared spectroscopic observation of seeded nucleation controlling geopolymer gel formation.

    PubMed

    Hajimohammadi, Ailar; Provis, John L; van Deventer, Jannie S J

    2011-05-15

    The effect of seeded nucleation on the formation and structural evolution of one-part ("just add water") geopolymer gels is investigated. Gel-forming systems are seeded with each of three different oxide nanoparticles, and seeding is shown to have an important role in controlling the silica release rate from the solid geothermal silica precursor, and in the development of physical properties of the gels. Nucleation accelerates the chemical changes taking place during geopolymer formation. The nature of the seeds affects the structure of the growing gel by affecting the extent of phase separation, identified by the presence of a distinct silica-rich gel in addition to the main, more alumina-rich gel phase. Synchrotron radiation-based infrared microscopy (SR-FTIR) shows the effect of nucleation on the heterogeneous nanostructure and microstructure of geopolymer gels, and is combined with data obtained by time-resolved FTIR analysis to provide a more holistic view of the reaction processes at a level of detail that has not previously been available. While spatially averaged (ATR-FTIR) infrared results show similar spectra for seeded and unseeded samples which have been cured for more than 3 weeks, SR-FTIR results show marked differences in gel structure as a result of seeding.

  3. Ellipsometry study on gold-nanoparticle-coated gold thin film for biosensing application

    PubMed Central

    Moirangthem, Rakesh Singh; Chang, Yia-Chung; Wei, Pei-Kuen

    2011-01-01

    The amplified plasmonic response from various distributions of gold nanoparticles (AuNPs) coated on top of gold thin film was studied via ellipsometry under total internal reflection mode. The surface plasmon resonance dip can be tuned from the visible to near infrared by simply varying the AuNP concentration. Theoretical modeling based on effective medium theory with a multi-slice model has been employed to fit the experimental results. Additionally, this experimental tool has been further extended to study bio-molecular interactions with metal surfaces as well as in studying protein-protein interaction without any labeling. Hence, this technique could provide a non-destructive way of designing tunable label-free optical biosensors with very high sensitivity. PMID:21991549

  4. Interaction of collagen with chlorosulphonated paraffin tanning agents: Fourier transform infrared spectroscopic analysis and molecular dynamics simulations.

    PubMed

    Monti, Susanna; Bramanti, Emilia; Della Porta, Valentina; Onor, Massimo; D'Ulivo, Alessandro; Barone, Vincenzo

    2013-09-21

    The binding of chlorosulphonated paraffins to collagen triple helices is studied by means of classical molecular dynamics simulations and experimental spectroscopic techniques in order to disclose the principal characteristics of their interaction during the leather fattening process. Indeed, collagen is the main target to develop new leather modifying agents with specific characteristics, and an accurate design of the collagen binders, supported by predictive computational strategies, could be a successful tool to obtain new effective eco-compatible compounds able to impart to the leather the required functionalities and distinctive mechanical properties. Possible effects caused by the tanning agents on the collagen matrix have been identified from both experimental and theoretical points of view. Computational data in agreement with experiment have revealed that chlorosulphonated paraffins can interact favorably with the collagen residues having amine groups in their side chains (Arg, Lys, Asn and Gln) and reduce the tendency of the solvated collagen matrix to swell. However, the interference of chlorosulphonated paraffins with the unfolding process, which is operated mainly by the action of water, can be due both to covalent cross-linking of the collagen chains and intermolecular hydrogen bonding interactions involving also the hydroxyl groups of Hyp, Ser and Thr residues.

  5. Infrared spectroscopic study on the thermal decomposition of external and internal gelation products of simulated mixed oxide nuclear fuel.

    PubMed

    Kumar, K Suresh; Bhat, N P

    2004-02-01

    The thermal decomposition of urania-ceria gel corresponding to the composition U(0.7)Ce(0.3)O(2+x) obtained through external and internal gelation routes were studied using infrared spectroscopy (IR). In the case of externally gelated compound, the gel decomposes with the release of H2O and NH3 below 500 degrees C. A part of the NH3 released is entrapped in the solid and above 500 degrees C self reduction occurs in which U(VI) in the gel is reduced to U3O8. The decomposition products were identified to be U3O8 and CeO2. In the case of internally gelated compound, decomposition similar to the one for externally gelated compound occurred below 500 degrees C. Above 500 degrees C the carbon present in the gel reduced U(VI) to UO2 which formed solid solution with CeO2 around 650 degrees C.

  6. Infrared Spectroscopic Study on Structural Change and Interfacial Interaction in Rubber Composites Filled with Silica-Kaolin Hybrid Fillers

    NASA Astrophysics Data System (ADS)

    Chen, Y.; Guan, J.; Hu, H.; Gao, H.; Zhang, L.

    2016-07-01

    A series of natural rubber/styrene butadiene rubber/polybutadiene rubber composites was prepared with nanometer silica and micron kaolin by a dry modification process, mechanical compounding, and mold vulcanization. Fourier transform infrared spectroscopy and a scanning electron microscope were used to investigate the structural changes and interfacial interactions in composites. The results showed that the "seesaw" structure was formed particularly with the incorporation of silica particles in the preparation process, which would be beneficial to the dispersibility of fillers in the rubber matrix. The kaolinite platelets were generally arranged in directional alignment. Kaolinite with smaller particle size and low-defect structure was more stable in preparation, but kaolinite with larger particle size and high defect structure tended to change the crystal structure. The composite prepared in this research exhibited excellent mechanical and thermal properties.

  7. Effect of cholesterol on structural and dynamic properties of tripalmitoyl glyceride. A high-pressure infrared spectroscopic study.

    PubMed

    Wong, P T; Chagwedera, T E; Mantsch, H H

    1989-11-01

    The infrared spectra of tripalmitoyl glyceride confirm the tuning fork configuration previously attributed to trilauroyl glyceride (Small, D. M. 1986. Handbook of Lipid Research. Vol. 4). The acyl chains in solid tripalmitoyl glycerol, either within each molecule or between neighboring molecules, are oriented parallel to each other with the sn-3 acyl chains extended toward the opposite direction of the sn-1 and sn-2 chains. The presence of cholesterol increases the orientational disorder of the tripalmitoyl glyceride molecules in terms of increased reorientational fluctuations and twisting/torsion motions of the acyl chains. In the solid mixture, cholesterol is embedded in the tripalmitoyl glyceride lattice which results in a reorientation of the acyl chains within each molecule from a parallel packing to a nonparallel packing. No evidence was found for hydrogen bond formation between the OH group of cholesterol and any of the three C = O groups of tripalmitoyl glyceride.

  8. Circular dichroism and infrared spectroscopic characterization of secondary structure components of protein Z during mashing and boiling processes.

    PubMed

    Han, Yupeng; Wang, Jinjing; Li, Yongxian; Hang, Yu; Yin, Xiangsheng; Li, Qi

    2015-12-01

    In beer brewing, protein Z is hypothesized to stabilize beer foam. However, few investigations have revealed the relationship between conformational alterations to protein Z during the brewing process and beer foam. In this report, protein Z from sweet wort was isolated during mashing and boiling processes. Circular dichroism (CD) and Fourier transform infrared spectroscopy (FTIR) were used to monitor the structural characteristics of protein Z. The results showed that the α-helix and β-sheet content decreased, whereas the content of β-turn and random coil increased. The complex environment rich in polysaccharides may facilitate conformational alterations and modifications to protein Z. Additionally, the formation of extended structural features to protein Z provides access to reactive amino acid side chains that can undergo modifications and the exposure of hydrophobic core regions of the protein. Analyzing structural transformations should provide a deeper understanding of the mechanism of protein Z on maintaining beer foam.

  9. Infrared and Raman spectroscopic characterization of the carbonate mineral huanghoite - And in comparison with selected rare earth carbonates

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo; Xi, Yunfei; Belotti, Fernanda Maria

    2013-11-01

    Raman spectroscopy complimented with infrared spectroscopy has been used to study the rare earth based mineral huanghoite with possible formula given as BaCe(CO3)2F and compared with the Raman spectra of a series of selected natural halogenated carbonates from different origins including bastnasite, parisite and northupite. The Raman spectrum of huanghoite displays three bands are at 1072, 1084 and 1091 cm-1 attributed to the CO32- symmetric stretching vibration. The observation of three symmetric stretching vibrations is very unusual. The position of CO32- symmetric stretching vibration varies with mineral composition. Infrared spectroscopy of huanghoite show bands at 1319, 1382, 1422 and 1470 cm-1. No Raman bands of huanghoite were observed in these positions. Raman spectra of bastnasite, parisite and northupite show a single band at 1433, 1420 and 1554 cm-1 assigned to the ν3 (CO3)2- antisymmetric stretching mode. The observation of additional Raman bands for the ν3 modes for some halogenated carbonates is significant in that it shows distortion of the carbonate anion in the mineral structure. Four Raman bands for huanghoite are observed at 687, 704, 718 and 730 cm-1and assigned to the (CO3)2- ν2 bending modes. Raman bands are observed for huanghoite at around 627 cm-1 and are assigned to the (CO3)2- ν4 bending modes. Raman bands are observed for the carbonate ν4 in phase bending modes at 722 cm-1 for bastnasite, 736 and 684 cm-1 for parisite, 714 cm-1 for northupite. Raman bands for huanghoite observed at 3259, 3484 and 3589 cm-1 are attributed to water stretching bands. Multiple bands are observed in the OH stretching region for bastnasite and parisite indicating the presence of water and OH units in their mineral structure. Vibrational spectroscopy enables new information on the structure of huanghoite to be assessed.

  10. Infrared spectroscopic analysis of OH - and OD - in crystalline Li 2O as a function of chemical treatment

    NASA Astrophysics Data System (ADS)

    Kurasawa, T.; Maroni, V. A.

    1983-11-01

    Infrared spectroscopy has been used to study the chemical form and approximate concentration of OH - and OD - in Li 2O single crystals as a function of chemical treatment. Infrared absorption maxima at (3671±0.5) cm-1and (2711±3.3) cm-1 were observed for OH - and OD -, respectively. The absorption coefficient for OD - was determined to be 4.0±0.4 absorbance units per mol part per million OD - per mm of sample thickness. Vacuum baking of Li 2O crystals reduced the OH - and OD - concentrations to <50 mppm; baking in a low moisture-level D 2 environment at 600 to 800°C appeared to lead to volatilization of LiD from the Li 2O crystals; and baking in D 2 containing ( 350±50) mppm D 2O at 600 to 800°C produced a measurable quantity of LiOD. In all cases, the observed spectra indicated the presence of only one distinguishable form of OH - or OD - in the Li 2O lattice. Because of the close correspondence of the observed absorption maxima to reported values for pure LiOH and LiOD, the most consistent (although not conclusive) interpretation is that the OH - and OD - are present as a separate LiOH or LiOD phase at room temperature. Only limited conclusions can be drawn regarding the chemical state of OH - and OD - during the elevated temperatures exposures. An estimate of the approximate value for the solubility of tritium in Li 2O at 800°C was made using data from D 2/Li 2O isothermal exposure experiments — this value was ⩾ 25 wppm.

  11. Development and application of Fourier transform infrared spectroscopic techniques to the characterization of coal and oil shale

    SciTech Connect

    Snyder, R.W.

    1982-01-01

    The development of application programs for infrared spectroscopy has been an ongoing proposition for a number of years. This development, however, was accelerated with the advent of Fourier transform infared (FT-IR) instruments and their built-in mini-computers. The uses and pitfalls of several of these routines are discussed in this thesis. A least-squares curve resolving program has been developed and the use of this program is also discussed. The analysis of complex, multicomponent polymeric materials, such as coal and oil shale, by conventional infrared spectroscopy has been a difficult problem. The use of FT-IR spectroscopy for the qualitative and quantitative analysis of these types of materials is discussed. A characterization of oil shale from the Mahogany Zone of the Green River Formation has been obtained by FT-IR. A quantitative analysis of the mineral component by FT-IR spectroscopy is shown to be comparable to that obtained by x-ray diffraction when considering broad mineral types, i.e., carbonates. Methods for the FT-IR analysis of the organic component, both from the whole shale and from kerogen specimens, have been refined. There is a good correlation between the intensity of alkyl bands and Fisher assay yields. An assessment is made of the applicability of extinction coefficients obtained from paraffins to their use in quantitative analysis in oil shales. A quantitative analysis of OH content in coal by FT-IR is comparable to that done by other methods (i.e., chemical and NMR). An analysis is also made of the various types of OH groups in coal.

  12. Infrared spectroscopic characteristics of mixed rare earth triple-decker complexes with phthalocyaninato and 5-(4-hydroxyphenyl)-10,15,20-tris(4-octyloxy)porphyrinato ligands.

    PubMed

    Wang, Wendong; Bao, Guihong; Mao, Yajun; Lu, Fanli

    2013-03-01

    The infrared (IR) spectroscopic data for a series of nine mixed rare earth triple-deckers M(2)(III)[TO(OH)PP](Pc)(2)] [M=La···Dy, except Pm, Y and Ho⋯Lu; H(2)Por=5-(4-hydroxyphenyl)-10,15,20-tris(4-octyloxyphenyl)porphyrin, Pc=unsubstituted phthalocyanine] with tervalent rare earths have been collected. For M(2)(III)[TO(OH)PP](Pc)(2)], typical IR marker bands for the unsubstituted phthalocyanine dianion Pc(2-) are strong bands at 1327-1329 cm(-1), and a weak band around 1370-1383 cm(-1). They can be assigned to pyrrole CC stretchings. The absence of Pc(2-) another marker IR band around 1376 cm(-1) demonstrates that the cerium metal ion in the IR spectrum of Ce(2)(III)[TO(OH)PP](Pc)(2)] exists as intermediate valence state between III and IV. The IR spectra of these mixed triple-decker complexes reveal that the frequencies of pyrrole stretching, isoindole breathing, and aza stretchings are decreased sensitive to the rare earth ionic size, and remain basically unchanged along with the lanthanide contraction. These facts indicate that the π-π interactions in these mixed triple-deckers are weaker than those in the double-deckers.

  13. Infrared spectroscopic characteristics of mixed rare earth triple-decker complexes with phthalocyaninato and 5-(4-hydroxyphenyl)-10,15,20-tris(4-octyloxy)porphyrinato ligands

    NASA Astrophysics Data System (ADS)

    Wang, Wendong; Bao, Guihong; Mao, Yajun; Lu, Fanli

    2013-03-01

    The infrared (IR) spectroscopic data for a series of nine mixed rare earth triple-deckers M2III[TO(OH)PP](Pc)2] [M = La⋯Dy, except Pm, Y and Ho⋯Lu; H2Por = 5-(4-hydroxyphenyl)-10,15,20-tris(4-octyloxyphenyl)porphyrin, Pc = unsubstituted phthalocyanine] with tervalent rare earths have been collected. For M2III[TO(OH)PP](Pc)2], typical IR marker bands for the unsubstituted phthalocyanine dianion Pc2- are strong bands at 1327-1329 cm-1, and a weak band around 1370-1383 cm-1. They can be assigned to pyrrole Cdbnd C stretchings. The absence of Pc2- another marker IR band around 1376 cm-1 demonstrates that the cerium metal ion in the IR spectrum of Ce2III[TO(OH)PP](Pc)2] exists as intermediate valence state between III and IV. The IR spectra of these mixed triple-decker complexes reveal that the frequencies of pyrrole stretching, isoindole breathing, and aza stretchings are decreased sensitive to the rare earth ionic size, and remain basically unchanged along with the lanthanide contraction. These facts indicate that the π-π interactions in these mixed triple-deckers are weaker than those in the double-deckers.

  14. Coordination of ScO+ and YO+ by multiple Ar, Kr, and Xe atoms in noble gas matrixes: a matrix isolation infrared spectroscopic and theoretical study.

    PubMed

    Zhao, Yanying; Gong, Yu; Chen, Mohua; Ding, Chuanfan; Zhou, Mingfei

    2005-12-29

    The combination of matrix isolation infrared spectroscopic and quantum chemical calculation results provide strong evidence that scandium and yttrium monoxide cations, ScO+ and YO+, coordinate multiple noble gas atoms in forming noble gas complexes. The results showed that ScO+ coordinates five Ar, Kr, or Xe atoms, and YO+ coordinates six Ar or Kr and five Xe atoms in solid noble gas matrixes. Hence, the ScO+ and YO+ cations trapped in solid noble gas matrixes should be regarded as the [ScO(Ng)5]+ (Ng = Ar, Kr, or Xe), [YO(Ng)6]+ (Ng = Ar or Kr) or [YO(Xe)5]+ complexes. Experiments with dilute krypton or xenon in argon or krypton in xenon produced new IR bands, which are due to the stepwise formation of the [ScO(Ar)(5-n)(Kr)n]+, [ScO(Kr)(5-n)(Xe)n]+ (n = 1-5), [YO(Ar)(6-n)(Kr)n]+ (n = 1-6), and [YO(Ar)(6-n)(Xe)n]+ (n = 1-4) complexes.

  15. Selection method of quasi-continuous wavelength combination with applications to the near-infrared spectroscopic analysis of soil organic matter.

    PubMed

    Pan, Tao; Li, Minmiao; Chen, Jiemei

    2014-01-01

    Equidistant combination multiple linear regression (EC-MLR) for the quasi-continuous wavelength selection of spectroscopic analysis was proposed and successfully applied to the reagent-free determination of soil organic matter with near-infrared spectroscopy. For comparison, the continuous-mode moving window partial least squares (MWPLS) and the discrete-mode successive projections algorithm (SPA) were improved by considering the stability and applied to the same analysis object as well. All methods exhibited good effect, but the modeling accuracy, stability, and validation effect of EC-MLR were better than that of the other two methods. Compared with MWPLS, the optimal EC-MLR model contained only 16 wavelengths, and method complexity was substantially reduced. Compared with SPA-MLR, the optimal EC-MLR model could easily undergo spectral preprocessing to improve predictive capability. Moreover, appropriate equidistant discrete wavelength combination with EC-MLR corresponded to the spectral absorption band with proper resolution and can effectively overcome co-linearity interruption for the MLR model. Thus, the EC-MLR method has great potential in practical application and instrument design.

  16. Process analytical technology: chemometric analysis of Raman and near infra-red spectroscopic data for predicting physical properties of extended release matrix tablets.

    PubMed

    Shah, Rakhi B; Tawakkul, Mobin A; Khan, Mansoor A

    2007-05-01

    The purpose of this work was to develop a correlation between pharmaceutical properties such as hardness, porosity, and content with prediction models employed using Raman and near infra-red (NIR) spectroscopic methods. Metoprolol tartrate tablets were prepared by direct compression and wet granulation methods. NIR spectroscopy and chemical imaging, and Raman spectra were collected, and hardness, porosity, and dissolution were measured. The NIR PLS model showed a validated correlation coefficient of >0.90 for the predicted versus measured porosity, hardness, and amount of drug with raw and second derivative NIR spectra. Raman spectra correlated porosity of the tablets using raw data for directly compressed tablets and wet granulated tablets (r(2) > 0.90). A very close root-mean square error of calibration (RMSEC) and root-mean square error of prediction (RMSEP) values were found in all the cases indicating validity of the calibration models. Raman spectroscopy was used for the first time to predict physical quality attribute such as porosity successfully. Chemical imaging utilizing NIR detector also demonstrated to show physical changes due to compression differences. In conclusion, sensor technologies can be potentially used to predict physical parameters of the matrix tablets.

  17. THE MID-INFRARED LUMINOSITY FUNCTION AT z < 0.3 FROM 5MUSES: UNDERSTANDING THE STAR FORMATION/ACTIVE GALACTIC NUCLEUS BALANCE FROM A SPECTROSCOPIC VIEW

    SciTech Connect

    Wu Yanling; Shi Yong; Helou, George; Armus, Lee; Stierwalt, Sabrina; Dale, Daniel A.; Papovich, Casey; Rahman, Nurur; Dasyra, Kalliopi E-mail: yong@ipac.caltech.edu E-mail: lee@ipac.caltech.edu E-mail: ddale@uwyo.edu E-mail: nurur@astro.umd.edu

    2011-06-10

    We present rest-frame 15 and 24 {mu}m luminosity functions (LFs) and the corresponding star-forming LFs at z < 0.3 derived from the 5MUSES sample. Spectroscopic redshifts have been obtained for {approx}98% of the objects and the median redshift is {approx}0.12. The 5-35 {mu}m Infrared Spectrograph spectra allow us to estimate accurately the luminosities and build the LFs. Using a combination of starburst and quasar templates, we quantify the star formation (SF) and active galactic nucleus (AGN) contributions in the mid-IR spectral energy distribution. We then compute the SF LFs at 15 and 24 {mu}m, and compare with the total 15 and 24 {mu}m LFs. When we remove the contribution of AGNs, the bright end of the LF exhibits a strong decline, consistent with the exponential cutoff of a Schechter function. Integrating the differential LF, we find that the fractional contribution by SF to the energy density is 58% at 15 {mu}m and 78% at 24 {mu}m, while it goes up to {approx}86% when we extrapolate our mid-IR results to the total IR luminosity density. We confirm that the AGNs play more important roles energetically at high luminosities. Finally, we compare our results with work at z {approx} 0.7 and confirm that evolution on both luminosity and density is required to explain the difference in the LFs at different redshifts.

  18. The vertical structure of the Uranian atmosphere near equinox as modeled with near-infrared spectroscopic observations

    NASA Astrophysics Data System (ADS)

    Norwood, James Walter

    We acquired spectra of Uranus in September 2006 and September 2007, at NASA's infrared Telescope Facility using the spectrograph SpeX. These spectra from 0.8--2.5 mum allow probing the Uranian troposphere due to the low haze opacity and broad range in methane opacity in the near infrared. Our observations occurred close to Uranus' December 2007 equinox, which not only allowed us to simultaneously observe regions of constant latitude due to the near-zero sub-observer latitude, but also provided a rare opportunity to study Uranus in one of the extremes of its 84-year seasonal cycle. We modeled the vertical structure of the Uranian atmosphere with a radiative transfer code designed to generate synthetic spectra based on a given set of atmospheric properties, for comparison with our observations. We employed the band-model methane absorption coefficients of Irwin et al. (2006), determined the effects of collision-induced absorption, and accounted for the large spatial coverage in each observation by calculating the contributions of numerous locations on Uranus to each spectrum. Our models assumed three aerosol layers in the atmosphere of Uranus: a stratospheric haze layer, and two tropospheric cloud layers. We fit optimum values to the optical depth of each aerosol layer in different spectral regions and to the pressure levels of each cloud layer; holding all other parameters constant. Our model results described two overarching regimes on Uranus. In 2006, the spectra from the southern hemisphere were best fit with bright clouds at high altitude, while the northern hemisphere was characterized by a dimmer haze layer, almost nonexistent upper cloud, and a deep lower cloud near 7 bars. However, this changed in the one-year interim between our data sets. In 2007, the high-cloud regions were instead around the equator, and we found the region near 45°S, which in previous years had displayed a bright polar collar, to have taken on the characteristics of the dimmer deeper

  19. NEAR-INFRARED IMAGING AND SPECTROSCOPIC SURVEY OF THE SOUTHERN REGION OF THE YOUNG OPEN CLUSTER NGC 2264

    SciTech Connect

    Marinas, Naibi; Lada, Elizabeth A.; Teixiera, Paula S.; Lada, Charles J.

    2013-08-01

    We have obtained JHK near-IR images and JH band low-resolution spectra of candidate members of the southern region of the young open cluster NGC 2264. We have determined spectral types from H-band spectra for 54 sources, 25 of which are classified for the first time. The stars in our sample cover a large range of spectral types (A8-M8). Using a cluster distance of 780 pc, we determined a median age of 1 Myr for this region of NGC 2264, with 90% of the stars being 5 Myr or younger. To improve the statistical significance of our sample, we included 66 additional cluster members within our field of view with optical spectral classification in the literature. We derived infrared excesses using stellar properties to model the photospheric emission for each source and the extinction to correct FLAMINGOS near-IR and Spitzer mid-IR photometry, and obtained a disk fraction of 51% {+-} 5% for the region. Binning the stars by stellar mass, we find a disk fraction of 38% {+-} 9% for the 0.1-0.3 solar mass group, 55% {+-} 6% for 0.3-1 solar masses, and 58% {+-} 10% for the higher than 1 solar mass group. The lower disk fraction for the lower mass stars is similar to the results found in non-cluster regions like Taurus and Chamaeleon, but differs from the older 3 Myr cluster IC 348 in which the disk fraction is lower for the higher mass stars. This mass-dependent disk fraction is accentuated in the sample with isochrone ages younger than 2 Myr. Here, we find that 45% {+-} 11% of the 0.1-0.3 solar mass stars have disks, 60% {+-} 7% of the 0.3-1 solar mass stars have disks, and all 1-3 solar mass stars have disks. Stellar masses might be an important factor in the ability of a system to form or retain a disk early on. However, regardless of the stellar mass, the large infrared excesses expected from optically thick disks disappear within the first 2 Myr for all stars in our study and small excesses from optically thin disks are found mostly in sources younger than 4 Myr.

  20. INFRARED SPECTROSCOPIC SURVEY OF THE QUIESCENT MEDIUM OF NEARBY CLOUDS. I. ICE FORMATION AND GRAIN GROWTH IN LUPUS

    SciTech Connect

    Boogert, A. C. A.; Chiar, J. E.; Knez, C.; Mundy, L. G.; Öberg, K. I.; Pendleton, Y. J.; Tielens, A. G. G. M.; Van Dishoeck, E. F.

    2013-11-01

    Infrared photometry and spectroscopy (1-25 μm) of background stars reddened by the Lupus molecular cloud complex are used to determine the properties of grains and the composition of ices before they are incorporated into circumstellar envelopes and disks. H{sub 2}O ices form at extinctions of A{sub K} = 0.25 ± 0.07 mag (A{sub V} = 2.1 ± 0.6). Such a low ice formation threshold is consistent with the absence of nearby hot stars. Overall, the Lupus clouds are in an early chemical phase. The abundance of H{sub 2}O ice (2.3 ± 0.1 × 10{sup –5} relative to N{sub H}) is typical for quiescent regions, but lower by a factor of three to four compared to dense envelopes of young stellar objects. The low solid CH{sub 3}OH abundance (<3%-8% relative to H{sub 2}O) indicates a low gas phase H/CO ratio, which is consistent with the observed incomplete CO freeze out. Furthermore it is found that the grains in Lupus experienced growth by coagulation. The mid-infrared (>5 μm) continuum extinction relative to A{sub K} increases as a function of A{sub K}. Most Lupus lines of sight are well fitted with empirically derived extinction curves corresponding to R{sub V} ∼ 3.5 (A{sub K} = 0.71) and R{sub V} ∼ 5.0 (A{sub K} = 1.47). For lines of sight with A{sub K} > 1.0 mag, the τ{sub 9.7}/A{sub K} ratio is a factor of two lower compared to the diffuse medium. Below 1.0 mag, values scatter between the dense and diffuse medium ratios. The absence of a gradual transition between diffuse and dense medium-type dust indicates that local conditions matter in the process that sets the τ{sub 9.7}/A{sub K} ratio. This process is likely related to grain growth by coagulation, as traced by the A{sub 7.4}/A{sub K} continuum extinction ratio, but not to ice mantle formation. Conversely, grains acquire ice mantles before the process of coagulation starts.

  1. Near-infrared Imaging and Spectroscopic Survey of the Southern Region of the Young Open Cluster NGC 2264

    NASA Astrophysics Data System (ADS)

    Mariñas, Naibí; Lada, Elizabeth A.; Teixeira, Paula S.; Lada, Charles J.

    2013-08-01

    We have obtained JHK near-IR images and JH band low-resolution spectra of candidate members of the southern region of the young open cluster NGC 2264. We have determined spectral types from H-band spectra for 54 sources, 25 of which are classified for the first time. The stars in our sample cover a large range of spectral types (A8-M8). Using a cluster distance of 780 pc, we determined a median age of 1 Myr for this region of NGC 2264, with 90% of the stars being 5 Myr or younger. To improve the statistical significance of our sample, we included 66 additional cluster members within our field of view with optical spectral classification in the literature. We derived infrared excesses using stellar properties to model the photospheric emission for each source and the extinction to correct FLAMINGOS near-IR and Spitzer mid-IR photometry, and obtained a disk fraction of 51% ± 5% for the region. Binning the stars by stellar mass, we find a disk fraction of 38% ± 9% for the 0.1-0.3 solar mass group, 55% ± 6% for 0.3-1 solar masses, and 58% ± 10% for the higher than 1 solar mass group. The lower disk fraction for the lower mass stars is similar to the results found in non-cluster regions like Taurus and Chamaeleon, but differs from the older 3 Myr cluster IC 348 in which the disk fraction is lower for the higher mass stars. This mass-dependent disk fraction is accentuated in the sample with isochrone ages younger than 2 Myr. Here, we find that 45% ± 11% of the 0.1-0.3 solar mass stars have disks, 60% ± 7% of the 0.3-1 solar mass stars have disks, and all 1-3 solar mass stars have disks. Stellar masses might be an important factor in the ability of a system to form or retain a disk early on. However, regardless of the stellar mass, the large infrared excesses expected from optically thick disks disappear within the first 2 Myr for all stars in our study and small excesses from optically thin disks are found mostly in sources younger than 4 Myr. Based on observations

  2. Rapid maturation of voice and linguistic processing systems in preschool children: a near-infrared spectroscopic study.

    PubMed

    Yamasaki, Takao; Ogata, Katsuya; Maekawa, Toshihiko; Ijichi, Ikue; Katagiri, Masatoshi; Mitsudo, Takako; Kamio, Yoko; Tobimatsu, Shozo

    2013-12-01

    To better understand how voice and linguistic processing systems develop during the preschool years, changes in cerebral oxygenation were measured bilaterally from temporal areas using multi-channel near-infrared spectroscopy (NIRS). NIRS was recorded while children listened to their mothers' voice (MV), an unfamiliar female voice (UV) and environmental sound (ES) stimuli. Twenty typical children (aged 3-6years) were divided into younger (Y) (n=10, male=5; aged 3-4.5years) and older (O) (n=10, male=5; aged 4.5-6years) groups. In the Y group, while MV stimuli significantly activated anterior temporal areas with a right predominance compared to ES stimuli, they significantly activated left mid-temporal areas compared to UV stimuli. These temporal activations were significantly higher in the Y group compared to the O group. Furthermore, only the O group exhibited significant habituation and gender differences in the left mid-temporal area during MV perception. These findings suggest that the right voice-related and the left language-related temporal areas already exist in the Y group, and that MV stimuli modulate these areas differently in the two age groups. Therefore, we conclude that a mother's voice plays an important role in the maturation of the voice and linguistic processing systems, particularly during the first half of the preschool-aged period. This role may decrease during the latter half of the preschool-aged period due to rapid development of these systems as children age.

  3. Near-infrared spectroscopic analysis of hemodynamics and mitochondrial redox in right lobe grafts in living-donor liver transplantation.

    PubMed

    Mitsuta, H; Ohdan, H; Fudaba, Y; Irei, T; Tashiro, H; Itamoto, T; Asahara, T

    2006-04-01

    Near-infrared spectroscopy (NIRS), which enables non-destructive evaluation of hemoglobin (Hb) oxygenation and the redox state of cytochromeoxidase (Cyt.aa3) in living tissues, has been employed during surgery to detect possible impairment of hemodynamics and mitochondrial respiration in the anterior segment of a right lobe liver graft in living-donor liver transplantation (LDLT). Thirty-six patients undergoing LDLT using a right lobe graft without the middle hepatic vein (MHV) were enrolled in this study. During the course of harvesting and implantation, NIRS measurements were performed on the anterior segments of the liver grafts. In two recipients of liver grafts with Hb residue over 70% in the anterior segment after ex vivo flushing, the MHV tributary was reconstructed, while it was not reconstructed in the other 34 recipients. Of those 34 recipients, 16 recipients of liver graft with 40-70% Hb residue showed transient increase of transaminase levels after LDLT. Of those 16 recipients, six recipients who showed reduction in oxidized Cyt.aa3 in the anterior segment suffered from persistent hyperbilirubinemia after LDLT. In patients showing impairment of mitochondrial redox associated with congestion caused by deprivation of the MHV tributaries, reconstruction of the MHV tributaries might have a beneficial effect.

  4. NGP: a new large format infrared detector for observation, hyperspectral and spectroscopic space missions in VISIR, SWIR and MWIR wavebands

    NASA Astrophysics Data System (ADS)

    Delannoy, Anne; Fièque, Bruno; Chorier, Philippe; Riuné, Céline

    2015-10-01

    SOFRADIR is one of the leading companies involved in the development and manufacturing of infrared detectors for space applications. As a matter of fact, SOFRADIR is present in many space programs in visible and SWIR spectral ranges. Most of these programs concern hyperspectral imagery observation of the earth but also some scientific applications. For more than 10 years, the Saturn generation detector (VISIR or SWIR) of Sofradir was the basis of numerous space missions. In order to answer future mission needs which require larger detector for better spatial and spectral resolutions while complying with all specifications reflecting the state of requirements for space detectors, SOFRADIR has developed a new detector in a frame of an ESA R and T program, named Next Generation Panchromatic Detector (NGP). While designed for VISIR and SWIR spectral ranges, this detector is also studied to be extended in MWIR spectral range. In this paper, NGP detector will be described as well as its performances. Space applications using this detector will be presented also showing appropriateness of its use to answer space programs specifications, as for example those of Sentinel-5.

  5. Relation Between Prefrontal Cortex Activity and Respiratory Rate During Mental Stress Tasks: A Near-Infrared Spectroscopic Study.

    PubMed

    Murayama, Yuta; Hu, Lizhen; Sakatani, Kaoru

    2016-01-01

    In order to clarify the central mechanism controlling respiratory rate during mental stress, we examined the relation between prefrontal cortex (PFC) activity and respiratory rate during mental arithmetic (MA) tasks. Employing two-channel near-infrared spectroscopy (NIRS), we measured hemoglobin (Hb) concentration changes in the bilateral PFC during MA tasks in normal adults. To evaluate asymmetry of the PFC activity, we calculated the laterality index (LI); (R-L)/(R + L) of oxy-Hb concentration changes (R = right, L = left); positive LI scores indicate right-dominant activity, while negative scores indicate left-dominant activity. For measurements of respiratory rate, we employed a Kinect motion sensor (Microsoft). The MA tasks increased both oxy-Hb in the bilateral PFC and respiratory rate (p < 0.001). In addition, there was a significant correlation between LI and respiratory rate (r = 0.582, p < 0.02). These results indicate that the MA-induced activity in the right PFC was greater than that in the left PFC in subjects with large increases of respiratory rate, suggesting that the right PFC has a greater role in cerebral regulation of respiratory rate during mental stress.

  6. Matrix infrared spectroscopic and density functional theoretical investigations on thorium and uranium atom reactions with dimethyl ether.

    PubMed

    Gong, Yu; Andrews, Lester

    2011-11-14

    Reactions of laser-ablated thorium and uranium atoms with dimethyl ether were investigated using matrix isolation infrared spectroscopy. Four types of reaction products for both uranium and thorium were identified using deuterium substituted samples as well as density functional frequency and energy calculations. Ground state uranium and thorium atoms react with dimethyl ether spontaneously to give the M(CH(3)OCH(3)) complexes (M = Th, U) on annealing, which are predicted to have C(2v) symmetry with triplet (Th) and quintet (U) ground states. Subsequent visible irradiation produces the divalent CH(3)OThCH(3) and CH(3)OUCH(3) insertion products with singlet and quintet states lowest in energy. Further UV irradiation induces isomerization of the CH(3)OMCH(3) molecules to the (CH(3))(2)MO isomers with M=O double bonds and pyramidal structures. In the presence of another dimethyl ether reagent, evidence for (CH(3)O)(2)M(CH(3))(2) molecules is also produced upon UV irradiation.

  7. Infrared spectroscopic and theoretical investigations of the OUF2 and OThF2 molecules with triple oxo bond character.

    PubMed

    Gong, Yu; Wang, Xuefeng; Andrews, Lester; Schlöder, Tobias; Riedel, Sebastian

    2012-06-18

    The terminal oxo species OUF(2) and OThF(2) have been prepared via the spontaneous and specific OF(2) molecule reactions with laser ablated uranium and thorium atoms in solid argon and neon. These isolated molecules are characterized by one terminal M-O and two F-M-F (M = U or Th) stretching vibrational modes observed in matrix isolation infrared spectra, which are further supported by density functional frequency calculations and CASPT2 energy and structure calculations. Both molecules have pyramidal structures with singlet (Th) and triplet (U) ground states. The molecular orbitals and metal-oxygen bond lengths for the OUF(2) and OThF(2) molecules indicate triple bond character for the terminal oxo groups, which are also substantiated by NBO analysis at the B3LYP level and by CASPT2 molecular orbital calculations. Dative bonding involving O(2p) → Th(6d) and U(df) interactions is clearly involved in these oxoactinide difluoride molecules. Finally, the weak O-F bond in OF(2) as well as the strong U-O, U-F and Th-O, Th-F bonds make reaction to form the OUF(2) and OThF(2) molecules highly exothermic.

  8. Infrared spectroscopic characterization of copper-polyhistidine from 1,800 to 50 cm(-1): model systems for copper coordination.

    PubMed

    El Khoury, Youssef; Hellwig, Petra

    2009-01-01

    Poly(L-histidine) and imidazole in the presence of copper cations have been investigated by means of Fourier transform infrared (IR) spectroscopy in the mid- and far-IR spectral range to establish specific marker bands of the copper-coordination site in metalloproteins as a function of pH as well as the effect of the coordination on the amino acid contributions. Whereas the well-known mid-IR region was specific for the secondary structure of the protein mimics, the far-IR region included contributions from the metal-ligand vibrations. The addition of copper led to secondary structure changes of poly(L-histidine) at neutral and basic pD and to specific shifts of ring vibrations. At pD 9.5 the addition of copper deprotonated the nitrogen atoms of the imidazole ring and the backbone. At neutral pD the copper cations were coordinated by the N3 atom of the imidazole ring. Copper-imidazole vibrations at neutral pD were observed at 154 and 128 cm(-1). Signals observed at 313 and 162 cm(-1) were assigned to metal-ligand vibrations arising from copper-poly(L-histidine) complexes with a negatively charged imidazole ring.

  9. Fourier-transform Raman and infrared spectroscopic analysis of 2-nitro-tetraphenylporphyrin and metallo-2-nitro-tetraphenylporphyrins

    NASA Astrophysics Data System (ADS)

    Hu, J.; Pavel, I.; Moigno, D.; Wumaier, M.; Kiefer, W.; Chen, Z.; Ye, Y.; Wu, Q.; Huang, Q.; Chen, S.; Niu, F.; Gu, Y.

    2003-07-01

    The Fourier-transform Raman (FT-Raman) and infrared (FT-IR) spectra of 2-nitro-tetraphenylporphyrin (2-NO 2-TPP), nickel-2-nitro-tetraphenylporphyrin (Ni-2-NO 2-TPP), zinc-2-nitro-tetraphenylporphyrin (Zn-2-NO 2-TPP) and copper-2-nitro-tetraphenylporphyrin (Cu-2-NO 2-TPP) were acquired for the first time and carefully assigned and discussed. The effects of a β-NO 2 group and the influence of the central metal on the molecular symmetry and vibrational spectra of the porphyrin macrocycle were also examined. The bands at 1323-1339, 1516-1526 and 961-971 cm -1 were attributed to the symmetric and asymmetric stretching vibration of the NO 2 group and to the stretching vibration of the C βN bond, respectively, which connects the NO 2 group with the β-carbon of the porphyrin macrocycle. These bands can act as a marker to distinguish β-NO 2 TPPs from other β-substituent TPPs. Cu-2-NO 2-TPP has a C4 ν molecular symmetry, which is different from those of Ni-2-NO 2-TPP and Zn-2-NO 2-TPP, i.e. D4 h.

  10. Indium phosphide all air-gap Fabry-Pérot filters for near-infrared spectroscopic applications

    NASA Astrophysics Data System (ADS)

    Ullah, A.; Butt, M. A.; Fomchenkov, S. A.; Khonina, S. N.

    2016-08-01

    Food quality can be characterized by noninvasive techniques such as spectroscopy in the Near Infrared wavelength range. For example, 930 -1450 nm wavelength range can be used to detect diseases and differentiate between meat samples. Miniaturization of such NIR spectrometers is useful for quick and mobile characterization of food samples. Spectrometers can be miniaturized, without compromising the spectral resolution, using Fabry-Pérot (FP) filters consisting of two highly reflecting mirrors with a central cavity in between. The most commonly used mirrors in the design of FP filters are Distributed Bragg Reflections (DBRs) consisting of alternating high and low refractive index material pairs, due to their high reflectivity compared to metal mirrors. However, DBRs have high reflectivity for a selected range of wavelengths known as the stopband of the DBR. This range is usually much smaller than the sensitivity range of the spectrometer detector. Therefore, a bandpass filter is usually required to restrict wavelengths outside the stopband of the FP DBRs. Such bandpass filters are difficult to design and implement. Alternatively, high index contrast materials must be can be used to broaden the stopband width of the FP DBRs. In this work, Indium phosphide all air-gap filters are proposed in conjunction with InGaAs based detectors. The designed filter has a wide stopband covering the entire InGaAs detector sensitivity range. The filter can be tuned in the 950-1450 nm with single mode operation. The designed filter can hence be used for noninvasive meat quality control.

  11. Far-infrared spectroscopic characterization of explosives for security applications using broadband terahertz time-domain spectroscopy.

    PubMed

    Fan, W H; Burnett, A; Upadhya, P C; Cunningham, J; Linfield, E H; Davies, A G

    2007-06-01

    Broadband terahertz time-domain spectroscopy (THz-TDS) has been used to measure the far-infrared (FIR) vibrational spectra of several commonly used pure explosives, including 2,4,6-trinitrotoluene (TNT), 1,3,5-trinitroperhydro-1,3,5-triazine (RDX), 1,3-dinitrato-2,2-bis(nitratomethyl)propane (PETN), and two types of plastic explosive, SEMTEX and SX2. A number of distinct absorption peaks, originating from FIR-active vibrational modes of these polycrystalline energetic materials, were observed in the frequency range 0.3-7.5 THz (10-250 cm(-1)). In addition, the temperature-dependent FIR vibrational spectra of PETN were measured between 4 K and 296 K with several well-resolved absorption peaks observed across this temperature range. We find that as the temperature is reduced, the observed absorption peaks resolve into narrower features and shift towards higher frequencies. The temperature dependence of the spectra is explained in terms of the anharmonicity of the vibrational potentials of crystalline compounds, and an empirical fit is given to describe the peak shift with temperature.

  12. Near-infrared spectroscopic monitoring of the diffusion process of deuterium-labeled molecules in wood. Part II: hardwood.

    PubMed

    Tsuchikawa, Satoru; Siesler, H W

    2003-06-01

    Fourier transform near-infrared (FT-NIR) transmission spectroscopy was applied to monitor the diffusion process of deuterium-labeled molecules in hardwood (Beech). The results are compared with previous data obtained on softwood (Sitka spruce) in order to consistently understand the state of order in cellulose of wood. The saturation accessibility and diffusion rate varied characteristically with the OH groups in different states of order in the wood substance, the diffusants, and the wood species, respectively. The variation of saturation accessibility should be associated with the fundamental difference of the fine structure such as the microfibrils in the wood substance. The effect of the anatomical cellular structure on the accessibility was reflected in the variation of the diffusion rate with the wood species. The size effect of the diffusants also played an important role for the diffusion process in wood. Since the volumetric percentage of wood fibers and wood rays is relatively similar, the dichroic effects due to the anisotropy of the cellulose chains were apparently diminished. Finally, we proposed a new interpretation of the fine structure of the microfibrils in the cell wall by comparing a series of results from hardwood and softwood. Each elementary fibril in the hardwood has a more homogeneous arrangement in the microfibrils compared to that in the softwood.

  13. Near-infrared spectroscopy with Spectroscopic technique with wide range of wavelength information detects tissue oxygenation level clearly

    NASA Astrophysics Data System (ADS)

    Eda, Hideo; Aoki, Hiromichi; Eura, Shigeru; Ebe, Kazutoshi

    2010-02-01

    Near-infrared spectroscopy (NIRS) is based on the modified-Lambert-Beer's law that changes in absorbance are proportional to changes in hemoglobin parameters. Majority of the conventional measurement methods uses only two or three wavelengths. In this research, basic examination of NIRS measurement was approached by acquiring wide range of wavelength information. Arterial occlusion task was performed by using the blood pressure cuff around the upper arm. Pressure of 200mmHg was then applied for about 3 minutes. During the arterial occlusion, the spectrum of the lower arm muscles was measured every 15 seconds, within the range of 600 to 1100nm. The secondary derivative spectrum was calculated from the measured spectrum. Arterial occlusion is a task which changes the oxygenation level of the tissue. The change can be regarded as the change of the spectrum form, not as the change of the baseline. Furthermore, it was found that other wavelength bands hold information correlating to this arterial occlusion task.

  14. In situ infrared spectroscopic study of brucite carbonation in dry to water-saturated supercritical carbon dioxide.

    PubMed

    Loring, John S; Thompson, Christopher J; Zhang, Changyong; Wang, Zheming; Schaef, Herbert T; Rosso, Kevin M

    2012-05-17

    In geologic carbon sequestration, whereas part of the injected carbon dioxide will dissolve into host brine, some will remain as neat to water saturated supercritical CO(2) (scCO(2)) near the well bore and at the caprock, especially in the short term life cycle of the sequestration site. Little is known about the reactivity of minerals with scCO(2) containing variable concentrations of water. In this study, we used high-pressure infrared spectroscopy to examine the carbonation of brucite (Mg(OH)(2)) in situ over a 24 h reaction period with scCO(2) containing water concentrations between 0% and 100% saturation, at temperatures of 35, 50, and 70 °C, and at a pressure of 100 bar. Little or no detectable carbonation was observed when brucite was reacted with neat scCO(2). Higher water concentrations and higher temperatures led to greater brucite carbonation rates and larger extents of conversion to magnesium carbonate products. The only observed carbonation product at 35 °C was nesquehonite (MgCO(3)·3H(2)O). Mixtures of nesquehonite and magnesite (MgCO(3)) were detected at 50 °C, but magnesite was more prevalent with increasing water concentration. Both an amorphous hydrated magnesium carbonate solid and magnesite were detected at 70 °C, but magnesite predominated with increasing water concentration. The identity of the magnesium carbonate products appears strongly linked to magnesium water exchange kinetics through temperature and water availability effects.

  15. Matrix isolation infrared spectroscopic and density functional theoretical study of the reactions of scandium and yttrium monoxides with monochloromethane.

    PubMed

    Huang, Yongfei; Zhao, Yanying; Zheng, Xuming; Zhou, Mingfei

    2010-02-25

    Reactions of scandium and yttrium monoxide molecules (ScO and YO) with monochloromethane have been studied in solid argon by infrared absorption spectroscopy and density functional theoretical calculations. The metal monoxide molecules were prepared by laser-evaporation of bulk metal oxide targets. The results show that the ground state scandium and yttrium monoxide molecules reacted with CH(3)Cl to form two MO(CH(3)Cl) (M = Sc, Y) complex isomers spontaneously on annealing. Broad-band UV-visible irradiation initiated the addition of the Cl-C bond to the M=O bond to form the CH(3)OMCl molecule and the addition of the C-H bond to the M=O bond to give the CH(2)ClMOH isomer, both of which are more stable than the MO(CH(3)Cl) complex structures. The CH(2)ClMOH molecule was predicted to involve agnostic interaction between the chlorine atom and the metal atom.

  16. Ultraviolet-infrared optical properties of highly (100)-oriented LaNiO3 thin films on Pt-Ti-SiO2-Si wafer

    NASA Astrophysics Data System (ADS)

    Yu, J.; Sun, J. L.; Meng, X. J.; Huang, Z. M.; Chu, J. H.; Tang, D. Y.; Jin, C. Y.; Li, G.; Li, W. Y.; Liang, Q.

    2001-09-01

    The optical constants of highly (100)-oriented LaNiO3 thin films on Pt(111)-Ti-SiO2-Si substrate derived by metalorganic deposition have been obtained using spectroscopic ellipsometry techniques in the wide wavelength range from ultraviolet to far infrared. In fitting the dielectric functions of LaNiO3, two harmonic oscillators are observed, one is believed to come from the valence-conduction interband transition and the other is attributed to the transition from a donor band to the conduction. Simultaneously the frequency of plasmon is also obtained, which results from the strong electron-electron interaction. Based on these optical and electrical properties, a promising application of LaNiO3 thin films in infrared microsensors has been proposed.

  17. Two-dimensional infrared spectroscopic study on the thermally induced structural changes of glutaraldehyde-crosslinked collagen

    NASA Astrophysics Data System (ADS)

    Tian, Zhenhua; Wu, Kun; Liu, Wentao; Shen, Lirui; Li, Guoying

    2015-04-01

    The thermal stability of collagen solution (5 mg/mL) crosslinked by glutaraldehyde (GTA) [GTA/collagen (w/w) = 0.5] was measured by differential scanning calorimetry and Fourier transform infrared spectroscopy (FTIR), and the thermally induced structural changes were analyzed using two-dimensional (2D) correlation spectra. The denaturation temperature (Td) and enthalpy change (ΔH) of crosslinked collagen were respectively about 27 °C and 88 J/g higher than those of native collagen, illuminating the thermal stability increased. With the increase of temperature, the red-shift of absorption bands and the decreased AIII/A1455 value obtained from FTIR spectra indicated that hydrogen bonds were weakened and the unwinding of triple helix occurred for both native and crosslinked collagens; whereas the less changes in red-shifting and AIII/A1455 values for crosslinked collagen also confirmed the increase in thermal stability. Additionally, the 2D correlation analysis provided information about the thermally induced structural changes. In the 2D synchronous spectra, the intensities of auto-peaks at 1655 and 1555 cm-1, respectively assigned to amide I band (Cdbnd O stretching vibration) and amide II band (combination of Nsbnd H bending and Csbnd N stretching vibrations) in helical conformation were weaker for crosslinked collagen than those for native collagen, indicating that the helical structure of crosslinked collagen was less sensitive to temperature. Moreover, the sequence of the band intensity variations showed that the band at 1555 cm-1 moved backwards owing to the addition of GTA, demonstrating that the response of helical structure of crosslinked collagen to the increased temperature lagged. It was speculated that the stabilization of collagen by GTA was due to the reinforcement of triple helical structure.

  18. Infrared and Fluorescence Spectroscopic Investigations of the Acyl Surface Modification of Hydrogel Beads for the Deposition of a Phospholipid Coating.

    PubMed

    Grossutti, Michael; Seenath, Ryan; Lipkowski, Jacek

    2015-10-27

    The scaffolded vesicle has been employed as an alternative means of developing natural model membranes and envisioned as a potential nutraceutical transporter. Furthering the research of the scaffolded vesicle system, a nucleophilic substitution reaction was implemented to form an ester linkage between palmitate and terminal hydroxyl groups of dextran in order to hydrophobically modify the hydrogel scaffold. An average tilt angle of 38° of the hydrophobic palmitate modifying layer on the surface of the hydrogel was determined from dichroic ratios obtained from infrared spectra collected in the attenuated total reflection (ATR) configuration. ATR-IR studies of the DMPC-coated acylated hydrogel demonstrated that the hydrocarbon chains of the DMPC coating was similar to those of the DMPC bilayers and that the underlying palmitate layer had a negligible effect on the average tilt angle (26°) of the DMPC coating. The permeability of this acylated hydrogel was investigated with fluorescence spectroscopy and the terbium/dipicolinic acid assay. The hydrophobic modification on the surface of the hydrogel bead allowed for an efficient deposition of a DMPC layer that served as an impermeable barrier to terbium efflux. About 72% of DMPC-coated acylated hydrogel beads showed ideal barrier properties. The remaining 28% were leaking, but the half-life of terbium efflux of the DMPC-coated acylated hydrogel was increasing, and the total amount of leaked terbium was decreasing with the incubation time. The half-life time and the retention were considered a marked improvement relative to past scaffolded vesicle preparations. The process of acylating hydrogel beads for efficient DMPC deposition has been identified as another viable method for controlling the permeability of the scaffolded vesicle.

  19. Fourier transform-infrared spectroscopic methods for microbial ecology: analysis of bacteria, bacteria-polymer mixtures and biofilms

    NASA Technical Reports Server (NTRS)

    Nichols, P. D.; Henson, J. M.; Guckert, J. B.; Nivens, D. E.; White, D. C.

    1985-01-01

    Fourier transform-infrared (FT-IR) spectroscopy has been used to rapidly and nondestructively analyze bacteria, bacteria-polymer mixtures, digester samples and microbial biofilms. Diffuse reflectance FT-IR (DRIFT) analysis of freeze-dried, powdered samples offered a means of obtaining structural information. The bacteria examined were divided into two groups. The first group was characterized by a dominant amide I band and the second group of organisms displayed an additional strong carbonyl stretch at approximately 1740 cm-1. The differences illustrated by the subtraction spectra obtained for microbes of the two groups suggest that FT-IR spectroscopy can be utilized to recognize differences in microbial community structure. Calculation of specific band ratios has enabled the composition of bacteria and extracellular or intracellular storage product polymer mixtures to be determined for bacteria-gum arabic (amide I/carbohydrate C-O approximately 1150 cm-1) and bacteria-poly-beta-hydroxybutyrate (amide I/carbonyl approximately 1740 cm-1). The key band ratios correlate with the compositions of the material and provide useful information for the application of FT-IR spectroscopy to environmental biofilm samples and for distinguishing bacteria grown under differing nutrient conditions. DRIFT spectra have been obtained for biofilms produced by Vibrio natriegens on stainless steel disks. Between 48 and 144 h, an increase in bands at approximately 1440 and 1090 cm-1 was seen in FT-IR spectra of the V. natriegens biofilm. DRIFT spectra of mixed culture effluents of anaerobic digesters show differences induced by shifts in input feedstocks. The use of flow-through attenuated total reflectance has permitted in situ real-time changes in biofilm formation to be monitored and provides a powerful tool for understanding the interactions within adherent microbial consortia.

  20. Fourier transform-infrared spectroscopic methods for microbial ecology: analysis of bacteria, bacteria-polymer mixtures and biofilms.

    PubMed

    Nichols, P D; Henson, J M; Guckert, J B; Nivens, D E; White, D C

    1985-01-01

    Fourier transform-infrared (FT-IR) spectroscopy has been used to rapidly and nondestructively analyze bacteria, bacteria-polymer mixtures, digester samples and microbial biofilms. Diffuse reflectance FT-IR (DRIFT) analysis of freeze-dried, powdered samples offered a means of obtaining structural information. The bacteria examined were divided into two groups. The first group was characterized by a dominant amide I band and the second group of organisms displayed an additional strong carbonyl stretch at approximately 1740 cm-1. The differences illustrated by the subtraction spectra obtained for microbes of the two groups suggest that FT-IR spectroscopy can be utilized to recognize differences in microbial community structure. Calculation of specific band ratios has enabled the composition of bacteria and extracellular or intracellular storage product polymer mixtures to be determined for bacteria-gum arabic (amide I/carbohydrate C-O approximately 1150 cm-1) and bacteria-poly-beta-hydroxybutyrate (amide I/carbonyl approximately 1740 cm-1). The key band ratios correlate with the compositions of the material and provide useful information for the application of FT-IR spectroscopy to environmental biofilm samples and for distinguishing bacteria grown under differing nutrient conditions. DRIFT spectra have been obtained for biofilms produced by Vibrio natriegens on stainless steel disks. Between 48 and 144 h, an increase in bands at approximately 1440 and 1090 cm-1 was seen in FT-IR spectra of the V. natriegens biofilm. DRIFT spectra of mixed culture effluents of anaerobic digesters show differences induced by shifts in input feedstocks. The use of flow-through attenuated total reflectance has permitted in situ real-time changes in biofilm formation to be monitored and provides a powerful tool for understanding the interactions within adherent microbial consortia.

  1. Near-Infrared Spectroscopic Evaluation of the Water Content of Molded Polylactide under the Effect of Crystallization.

    PubMed

    Muroga, Shun; Hikima, Yuta; Ohshima, Masahiro

    2016-12-12

    During melt processing, the moisture inside polylactide (PLA) easily induces hydrolysis, which deteriorates the mechanical and thermal properties of the product. The state of dryness of resin pellets must be monitored to prevent PLA hydrolysis. In this study, near-infrared (NIR) spectroscopy was applied to measure water content in PLA. In addition, the shape of the NIR spectrum is also affected by crystallization, which could lead to a reduction in the accuracy of evaluating the water content. The objective of this research is to construct a robust model for estimating the water content with varying dispersive extents of crystallization. Two methods for estimating water content measured during a drying process were conducted: the integration of absorbance and partial least squares (PLS) regression were conducted to estimate the water contents in PLA considering the effect of crystallization. The slope of the calibration line of the water content obtained from integrating absorbance varied between PLA with different crystallinities. This is due to the overlap between the NIR band of water and that of PLA crystal in the range of 5100-5400 cm(-1) We found that the shape of the NIR spectrum was changed by crystallization, and the crystallinity, compared to the thickness of lamellae, was the dominant factor determining such a change of NIR spectra. The PLS model of water content constructed from only amorphous PLA showed large error of estimation in crystallized PLA. In contrast, the PLS model constructed from both amorphous and crystallized PLA estimated the water contents with lower errors. This was because latent variables obtained from both amorphous and crystallized PLA cancelled the effect of crystallization on NIR spectra.

  2. Gamma-irradiation and UV-C light-induced lipid peroxidation: a Fourier transform-infrared absorption spectroscopic study.

    PubMed

    Kinder, R; Ziegler, C; Wessels, J M

    1997-05-01

    Fourier transform-infrared spectroscopy of dry, multibilayer films has been used to study gamma-radiation and UV-C light induced lipid peroxidation in 1,2-dilinoleoyl-sn-glycero-3-phosphocholine liposomes. The observed spectral changes were compared with the results obtained from measurement of hydroperoxides, conjugated dienes and to the formation of thiobarbituric acid reactive substances, such as malondialdehyde (MDA) or MDA-like substances. Upon irradiation a decrease in intensity of the asymmetric C - H stretching vibration (va(CH2)) of the isolated cis C = C - H groups (3010 cm-1) was observed. Directly correlated with the decrease of the va(CH2) absorption was a shift of the asymmetric phosphate ester stretching vibration (va(P = O)) towards smaller wavenumbers (1260-->1244 cm-1), indicating that the lipid peroxidation induced molecular alterations in the fatty acid chains influence the packing of the phospholipids in dry multibilayer films. In addition, the formation of a new absorption band at 1693 cm-1 could be detected, the intensity of which was comparable with the formation of thiobarbituric acid reactive substances and, therefore, attributed to the (C = O) stretching of alpha, beta unsaturated aldehydes. Dose-dependent studies using ionizing radiation showed that the decrease of va(CH2) was directly correlated with an increase in absorption of the conjugated dienes at 234 nm and with the formation of hydroperoxides suggesting that the absorption at 3010 cm-1 is solely due to isolated cis C = C - H groups and hence subject to the early stages of the radical chain reaction. UV-C light induced lipid peroxidation revealed a non-linear decrease of I3010, which was directly correlated with the formation of hydroperoxides. The observed early saturation of the conjugated dienes was attributed to an early photodecomposition of the conjugated double bonds.

  3. Two-dimensional infrared spectroscopic study on the thermally induced structural changes of glutaraldehyde-crosslinked collagen.

    PubMed

    Tian, Zhenhua; Wu, Kun; Liu, Wentao; Shen, Lirui; Li, Guoying

    2015-04-05

    The thermal stability of collagen solution (5 mg/mL) crosslinked by glutaraldehyde (GTA) [GTA/collagen (w/w)=0.5] was measured by differential scanning calorimetry and Fourier transform infrared spectroscopy (FTIR), and the thermally induced structural changes were analyzed using two-dimensional (2D) correlation spectra. The denaturation temperature (Td) and enthalpy change (ΔH) of crosslinked collagen were respectively about 27°C and 88 J/g higher than those of native collagen, illuminating the thermal stability increased. With the increase of temperature, the red-shift of absorption bands and the decreased AIII/A1455 value obtained from FTIR spectra indicated that hydrogen bonds were weakened and the unwinding of triple helix occurred for both native and crosslinked collagens; whereas the less changes in red-shifting and AIII/A1455 values for crosslinked collagen also confirmed the increase in thermal stability. Additionally, the 2D correlation analysis provided information about the thermally induced structural changes. In the 2D synchronous spectra, the intensities of auto-peaks at 1655 and 1555 cm(-1), respectively assigned to amide I band (CO stretching vibration) and amide II band (combination of NH bending and CN stretching vibrations) in helical conformation were weaker for crosslinked collagen than those for native collagen, indicating that the helical structure of crosslinked collagen was less sensitive to temperature. Moreover, the sequence of the band intensity variations showed that the band at 1555 cm(-1) moved backwards owing to the addition of GTA, demonstrating that the response of helical structure of crosslinked collagen to the increased temperature lagged. It was speculated that the stabilization of collagen by GTA was due to the reinforcement of triple helical structure.

  4. Kinetics for the Sequential Infiltration Synthesis of Alumina in Poly(methyl methacrylate): An Infrared Spectroscopic Study

    SciTech Connect

    Biswas, Mahua; Libera, Joseph A.; Darling, Seth B.; Elam, Jeffrey W.

    2015-01-01

    Sequential infiltration synthesis (SIS) is a method for growing inorganic materials within polymers in an atomically controlled fashion. This technique can increase the etch resistance of optical, electron-beam, and block copolymer (BCP) lithography resists and is also a flexible strategy for nanomaterials synthesis. Despite this broad utility, the kinetics of SIS remain poorly understood, and this knowledge gap must be bridged in order to gain firm control over the growth of inorganic materials inside polymer films at a large scale. In this paper, we explore the reaction kinetics for Al2O3 SIS in PMMA using in situ Fourier transform infrared spectroscopy. First, we establish the kinetics for saturation adsorption and desorption of trimethyl aluminum (TMA) in PMMA over a range of PMMA film thicknesses deposited on silicon substrates. These observations guide the selection of TMA dose and purge times during SIS lithography to achieve robust organic/inorganic structures. Next, we examine the effects of TMA desorption on BCP lithography by performing SIS on silicon surfaces coated with polystyrene-block-poly(methyl methacrylate) films. After etching the organic components, the substrates are examined using scanning electron microcopy to evaluate the resulting Al2O3 patterns. Finally, we examine the effects of temperature on Al2O3 SIS in PMMA to elucidate the infiltration kinetics. The insights provided by these measurements will help extend SIS lithography to larger substrate sizes for eventual commercialization and expand our knowledge of precursor-polymer interactions that will benefit the SIS of a wide range of inorganic materials in the future.

  5. Spectrum of excess partial molar absorptivity. Part II: a near infrared spectroscopic study of aqueous Na-halides.

    PubMed

    Sebe, Fumie; Nishikawa, Keiko; Koga, Yoshikata

    2012-04-07

    Our earlier thermodynamic studies suggested that F(-) and Cl(-) form hydration shells with the hydration number 14 ± 2 and 2.3 ± 0.6, respectively, and leave the bulk H(2)O away from hydration shells unperturbed. Br(-) and I(-), on the other hand, form hydrogen bonds directly with the momentarily existing hydrogen bond network of H(2)O, and retard the degree of entropy-volume cross fluctuation inherent in liquid H(2)O. The effect of the latter is stronger for I(-) than Br(-). Here we seek additional information about this qualitative difference between Cl(-) and (Br(-) and I(-)) pair by near infrared (NIR) spectroscopy. We analyze the ν(2) + ν(3) band of H(2)O in the range 4600-5500 cm(-1) of aqueous solutions of NaCl, NaBr and NaI, by a new approach. From observed absorbance, we calculate excess molar absorptivity, ε(E), excess over the additive contributions of solute and solvent. ε(E) thus contains information about the effect of inter-molecular interactions in the ν(2) + ν(3) spectrum. The spectrum of ε(E) shows three bands; two negative ones at 5263 and 4873 cm(-1), and the positive band at 5123 cm(-1). We then define and calculate the excess partial molar absorptivity of each salt, ε(E)(salt). From the behaviour of ε(E)(salt) we suggest that the negative band at 5263 cm(-1) represents free H(2)O without much hydrogen bonding under the influence of local electric field of ions. Furthermore, from a sudden change in the x(salt) (mole fraction of salt) dependence of ε(E)(salt), we suggest that there is an ion-pairing in x(salt) > 0.032, 0.036, and 0.04 for NaCl, NaBr and NaI respectively. The positive band of ε(E) at 5123 cm(-1) is attributed to a modestly organized hydrogen bond network of H(2)O (or liquid-likeness), and the x(salt) dependence of ε indicated a qualitative difference in the effect of Cl(-) from those of Br(-) and I(-). Namely, the values of ε(E)(salt) stay constant for Cl(-) but those for Br(-) and I(-) decrease smoothly on

  6. Two-dimensional correlation infrared spectroscopic study on the crystallization and gelation of poly(vinylidene fluoride) in cyclohexanone.

    PubMed

    Peng, Yun; Sun, Bingjie; Wu, Peiyi

    2008-03-01

    Poly(vinylidene fluoride) (PVDF) converts easily into a thermo-reversible gel through crystallization by standing at room temperature in cyclohexanone. In this study, the Fourier transform infrared (FT-IR) spectra were measured continuously at room temperature during the conversion of the solution into a gel. The IR difference spectra derived from these spectra by absorbance subtraction clearly indicate the presence of PVDF alpha-crystallites in the gel due to the presence of absorption bands corresponding to the TG+TG- conformation of the alpha-phase. In the time interval from 25 to 45 min after the beginning of the experiment, the IR bands of PVDF increased dramatically, indicating the conversion of polymer chains from random statistical coils to the ordered TG+TG- conformation (alpha-form). In the time interval from 45 to 90 min, the IR bands of PVDF increased slowly, reflecting no further crystallization. Using two-dimensional (2D) IR analysis, it could be shown that the nu(C=O) absorption band of cyclohexanone changed during the gelation process. During the conformational ordering process (25-45 min), the nu(C=O) absorption band of the cyclohexanone dimer (1707 cm(-1)) decreased while the corresponding band of the monomer at 1718 cm(-1) increased. Furthermore, a new band at 1695 cm(-1) increased, which could be assigned to C=O groups of the solvent interacting with the CF2 groups in the polymer chain. The bands of the crystalline PVDF share positive cross-peaks with the bands of cyclohexanone, which indicates that the chain of PVDF changed prior to the cyclohexanone molecules during the conformational ordering process. However, these positive cross-peaks disappeared during the crystallization process, which means that the chain of PVDF changed synchronously with the solvent molecules. As for the bands of PVDF chains, the band at 762 cm(-1) varied prior to the bands at 873 cm(-1) and 796 cm(-1) during the conformational ordering process. The 762 cm(-1

  7. Near-infrared spectroscopic investigation of water in supercritical CO2 and the effect of CaCl2

    SciTech Connect

    Wang, Zheming; Felmy, Andrew R.; Thompson, Christopher J.; Loring, John S.; Joly, Alan G.; Rosso, Kevin M.; Schaef, Herbert T.; Dixon, David A.

    2013-01-01

    Near-infrared (NIR) spectroscopy was applied to investigate the dissolution and chemical interaction of water dissolved into supercritical carbon dioxide (scCO2) and the influence of CaCl2 in the co-existing aqueous phase at fo empe e : 40 50 75 nd 100 C at 90 atm. Consistent with the trend of the vapor pressure of water, the solubility of pure water in scCO2 inc e ed f om 40 °C (0.32 mole%) o 100 °C (1.61 mole%). The presence of CaCl2 negatively affects the solubility of water in scCO2: at a given temperature and pressure the solubility of water decreased as the concentration of CaCl2 in the aqueous phase increased, following the trend of the activity of water. A 40 °C, the water concentration in scCO2 in contact with saturated CaCl2 aqueous solution was only 0.16 mole%, a drop of more than 50% as compared to pure water while that a 100 °C was 1.12 mole%, a drop of over 30% as compared to pure water, under otherwise the same conditions. Analysis of the spectral profiles suggested that water dissolved into scCO2 exists in the monomeric form under the evaluated temperature and pressure conditions, for both neat water and CaCl2 solutions. However, its rotational degrees of freedom decrease at lower temperatures due to higher fluid densities, leading to formation of weak H2O:CO2 Lewis acid-base complexes. Similarly, the nearly invariant spectral profiles of dissolved water in the presence and absence of saturated CaCl2 under the same experimental conditions was taken as evidence that CaCl2 dissolution in scCO2 was limited as the dissolved Ca2+/CaCl2 would likely be highly hydrated and would alter the overall spectra of waters in the scCO2 phase.

  8. Herschel/PACS Spectroscopic Survey of Protostars in Orion: The Origin of Far-infrared CO Emission

    NASA Astrophysics Data System (ADS)

    Manoj, P.; Watson, D. M.; Neufeld, D. A.; Megeath, S. T.; Vavrek, R.; Yu, Vincent; Visser, R.; Bergin, E. A.; Fischer, W. J.; Tobin, J. J.; Stutz, A. M.; Ali, B.; Wilson, T. L.; Di Francesco, J.; Osorio, M.; Maret, S.; Poteet, C. A.

    2013-02-01

    We present far-infrared (57-196 μm) spectra of 21 protostars in the Orion molecular clouds. These were obtained with the Photodetector Array Camera and Spectrometer (PACS) on board the Herschel Space observatory as part of the Herschel Orion Protostar Survey program. We analyzed the emission lines from rotational transitions of CO, involving rotational quantum numbers in the range J up = 14-46, using PACS spectra extracted within a projected distance of lsim2000 AU centered on the protostar. The total luminosity of the CO lines observed with PACS (L CO) is found to increase with increasing protostellar luminosity (L bol). However, no significant correlation is found between L CO and evolutionary indicators or envelope properties of the protostars such as bolometric temperature, T bol, or envelope density. The CO rotational (excitation) temperature implied by the line ratios increases with increasing rotational quantum number J, and at least 3-4 rotational temperature components are required to fit the observed rotational diagram in the PACS wavelength range. The rotational temperature components are remarkably invariant between protostars and show no dependence on L bol, T bol, or envelope density, implying that if the emitting gas is in local thermodynamic equilibrium, the CO emission must arise in multiple temperature components that remain independent of L bol over two orders of magnitudes. The observed CO emission can also be modeled as arising from a single-temperature gas component or from a medium with a power-law temperature distribution; both of these require sub-thermally excited molecular gas at low densities (n(H2) <~ 106 cm-3) and high temperatures (T gsim 2000 K). Our results suggest that the contribution from photodissociation regions, produced along the envelope cavity walls from UV-heating, is unlikely to be the dominant component of the CO emission observed with PACS. Instead, the "universality" of the rotational temperatures and the observed

  9. Infrared spectroscopic study of the carbon dioxide adsorption on the surface of Ga2O3 polymorphs.

    PubMed

    Collins, Sebastián E; Baltanás, Miguel A; Bonivardi, Adrian L

    2006-03-23

    The adsorption of CO(2) over a set of gallium (III) oxide polymorphs with different crystallographic phases (alpha, beta, and gamma) and surface areas (12-105 m(2) g(-1)) was studied by in situ infrared spectroscopy. On the bare surface of the activated gallias (i.e., partially dehydroxylated under O(2) and D(2) (H(2)) at 723 K), several IR signals of the O-D (O-H) stretching mode were assigned to mono-, di- and tricoordinated OD (OH) groups bonded to gallium cations in tetrahedral and/or octahedral positions. After exposing the surface of the polymorphs to CO(2) at 323 K, a variety of (bi)carbonate species emerged. The more basic hydroxyl groups were able to react with CO(2), to yield two types of bicarbonate species: mono- (m-) and bidentate (b-) [nu(as)(CO(3)) = 1630 cm(-1); nu(s)(CO(3)) = 1431 or 1455 cm(-1) (for m- or b-); delta(OH) = 1225 cm(-1)]. Together with the bicarbonate groups, IR bands assigned to carboxylate [nu(as)(CO(2)) = 1750 cm(-1); nu(s)(CO(2)) = 1170 cm(-1)], bridge carbonate [nu(as)(CO(3)) = 1680 cm(-1); nu(s)(CO(3)) = 1280 cm(-1)], bidentate carbonate [nu(as)(CO(3)) = 1587 cm(-1); nu(s)(CO(3)) = 1325 cm(-1)], and polydentate carbonate [nu(as)(CO(3)) = 1460 cm(-1); nu(s)(CO(3)) = 1406 cm(-1)] species developed, up to approximately 600 Torr of CO(2). However, only the bi- and polydentate carbonate groups still remained on the surface upon outgassing the samples at 323 K. The total amount of adsorbed CO(2), measured by volumetric adsorption (323 K), was approximately 2.0 micromol m(-2) over any of the polymorphs, congruent with an integrated absorbance of (bi)carbonate species proportional to the surface area of the materials. Upon heating under flowing CO(2) (760 Torr), most of the (bi)carbonate species vanished a T > 550 K, but polydentate groups remained on the surface up to the highest temperature used (723 K). A thorough discussion of the more probable surface sites involved in the adsorption of CO(2) is made.

  10. An investigation using Spectroscopic Ellipsometery in Bio-Physical

    NASA Astrophysics Data System (ADS)

    Pfeiffer, Galen; Thompson, Daniel; Berberov, Emil; Woollam, John; Bleiweiss, Michael; Datta, Timir

    2001-03-01

    The present work is an investigation of bio-physical systems using spectroscopic ellipsometry (SE), with wavelengths ranging from deep-ultraviolet to the far infrared. Recent advances in SE hardware, software and data analysis permit rapid, non-contact investigation of physical properties of nano-dimensional soft-material films and interfaces such as bio-films under liquids. The kinetics of attachment, layer thickness, density of coverage, and identification of interfacial chemistry of proteins, for example, on surfaces is of practical and fundamental importance in biology and medicine, and are potentially measurable by SE. Our initial findings determine adsorption rates of Bovine Serum Albumin (BSA) and other bio-films on gold and polystyrene substrates, as well as their spatial distributions. We were also able to identify attachment of a 2.5 nm layer of the diarrhea causing E. coli enterotoxin (LT) to ganglioside (GM1) receptor, potentially simplifying and providing more information to standard enzyme linked immuno sorbent assay (ELISA) methods. Results of studies of several different bio-physical systems using SE will be discussed.

  11. Near-Infrared Spectroscopic Measurement of the Effect of Leg Dominance on Muscle Oxygen Saturation During Cycling

    NASA Technical Reports Server (NTRS)

    Ellerby, Gwenn E. C.; Lee, Stuart M. C.; Paunescu, Lelia Adelina; Pereira, Chelsea; Smith, Charles P.; Soller, Babs R.

    2011-01-01

    The effect of leg dominance on the symmetry of the biomechanics during cycling remains uncertain -- asymmetries have been observed in kinematics and kinetics, while symmetries were found in muscle activation. No studies have yet investigated the symmetry of muscle metabolism during cycling. Near-infrared spectroscopy (NIRS) provides a non-invasive method to investigate the metabolic responses of specific muscles during cycling. PURPOSE: To determine whether there was an effect of leg dominance on thigh muscle oxygen saturation (SmO2) during incrementally loaded submaximal cycling using NIRS. METHODS: Eight right leg dominant, untrained subjects (5 men, 3 women; 31+/-2 yrs; 168.6+/-1.0 cm; 67.2+/-1.8 kg, mean +/- SE) volunteered to participate. Spectra were collected bilaterally from the vastus lateralis (VL) during supine rest and cycling. SmO2 was calculated using previously published methods. Subjects pedaled at 65 rpm while resistance to pedaling was increased in 0.5 kp increments from 0.5 kp every 3 min until the subject reached 80% of age-predicted maximal heart rate. SmO2 was averaged over 3 min for each completed stage. A two-way ANOVA was performed to test for leg differences. A priori contrasts were used to compare work levels to rest. RESULTS: VL SmO2 was not different between the dominant and non-dominant legs at rest and during exercise (p=0.57). How SmO2 changed with workload was also not different between legs (p=0.32). SmO2 at 0.5 kp (60.3+/-4.0, p=0.12) and 1.0 kp (59.5+/-4.0, p=0.10) was not different from rest (69.1+/-4.0). SmO2 at 1.5 kp (55.4 4.0, p=0.02), 2.0 kp (55.7+/-5.0, p=0.04), and 2.5 kp (43.4+/-7.9, p=0.01) was significantly lower than rest. CONCLUSION: VL SmO2 during cycling is not different between dominant and non-dominant legs and decreases with moderate workload in untrained cyclists. Assuming blood flow is directed equally to both legs, similar levels of oxygen extraction (as indicated by SmO2) suggests the metabolic load of

  12. The microstructure of the stratum corneum lipid barrier: mid-infrared spectroscopic studies of hydrated ceramide:palmitic acid:cholesterol model systems.

    PubMed

    Garidel, Patrick; Fölting, Bettina; Schaller, Ingrid; Kerth, Andreas

    2010-08-01

    The current mid-infrared spectroscopic study is a systematic investigation of hydrated stratum corneum lipid barrier model systems composed of an equimolar mixture of a ceramide, free palmitic acid and cholesterol. Four different ceramide molecules (CER NS, CER NP, CER NP-18:1, CER AS) were investigated with regard to their microstructure arrangement in a stratum corneum lipid barrier model system. Ceramide molecules were chosen from the sphingosine and phytosphingosine groups. The main differences in the used ceramide molecules result from their polar head group architecture as well as hydrocarbon chain properties. The mixing properties with cholesterol and palmitic acid are considered. This is feasible by using perdeuterated palmitic acid and proteated ceramides. Both molecules can be monitored separately, within the same experiment, using mid-infrared spectroscopy; no external label is necessary. At physiological relevant temperatures, between 30 and 35 degrees C, orthorhombic as well as hexagonal chain packing of the ceramide molecules is observed. The formation of these chain packings are extremely dependent on lipid hydration, with a decrease in ceramide hydration favouring the formation of orthorhombic hydrocarbon chain packing, as well as temperature. The presented data suggest in specific cases phase segregation in ceramide and palmitic acid rich phases. However, other ceramides like CER NP-18:1 show a rather high miscibility with palmitic acid and cholesterol. For all investigated ternary systems, more or less mixing of palmitic acid with cholesterol is observed. The investigated stratum corneum mixtures exhibit a rich polymorphism from crystalline domains with heterogeneous lipid composition to a "fluid" homogeneous phase. Thus, a single gel phase is not evident for the presented stratum corneum model systems. The study shows, that under skin physiological conditions (pH 5.5, hydrated, 30-35 degrees C) ternary systems composed of an equimolar ratio of

  13. Raman and infrared spectroscopic study of the mineral goyazite SrAl3(PO4)2(OH)5·H2O

    NASA Astrophysics Data System (ADS)

    López, Andrés; Xi, Yunfei; Frost, Ray L.

    2013-12-01

    We have studied the mineral goyazite using Raman and infrared spectroscopy. Goyazite is a member of the crandallite subgroup of the alunite supergroup. The crystal structure is of the alunite-type and consists of sheets of corner-sharing AlO6 octahedra parallel to (0 0 0 1). The octahedrally coordinated Sr2+ cations occupy cavities between pairs of octahedral sheets and are surrounded by six oxygen atoms from the Al3+O6 octahedra. The very intense sharp band at 983 cm-1 is assigned to the ν1PO43- symmetric stretching mode. The observation of a single band supports the concept that all the phosphate units are equivalent in the structure of goyazite. Raman bands observed at 1029 cm-1 and 1037 cm-1 are assigned to the ν3PO43- antisymmetric stretching vibrations. Two Raman bands at 895 and 927 cm-1 are attributed to the stretching vibrations of H2PO4; thus indicating some hydrogen phosphate units in the structure of goyazite. Raman bands at 556, 581, 596 and 612 cm-1 are assigned to the ν4PO43- bending modes, suggesting a reduction of symmetry of phosphate units. Two sharp Raman bands at 3609 and 3631 cm-1 are attributed to OH stretching vibrations from the goyazite hydroxyl units. Broad Raman bands at 2924, 3043, 3210, 3429 and 3511 cm-1 are assigned to water stretching vibrations. This research shows that from a vibrational spectroscopic point of view, the formula SrAl3(H PO4,PO4)2(OH)6ṡH2O is a better formulation for the mineral goyazite. Vibrational spectroscopy enables subtle details of the molecular structure of goyazite to be determined.

  14. Differentiation of Salmonella enterica serovars and strains in cultures and food using infrared spectroscopic and microspectroscopic techniques combined with soft independent modeling of class analogy pattern recognition analysis.

    PubMed

    Männig, Annegret; Baldauf, Nathan A; Rodriguez-Romo, Luis A; Yousef, Ahmed E; Rodríguez-Saona, Luis E

    2008-11-01

    Detection of pathogenic microorganisms in food is often a tedious and time-consuming exercise. Developing rapid and cost-effective techniques for identifying pathogens to subspecies is critical for tracking causes of foodborne disease outbreaks. The objective of this study was to develop a method for rapid identification and differentiation of Salmonella serovars and strains within these serovars through isolation on hydrophobic grid membrane filters (HGMFs), examination by infrared (IR) spectroscopy and microspectroscopy, and data analysis by multivariate statistical techniques. Salmonella serovars (Anatum, Enteritidis, Heidelberg, Kentucky, Muenchen, and Typhimurium), most of which were represented by multiple strains, were grown in tryptic soy broth (24 h at 42 degrees C), diluted to 10(2) to 10(3) CFU/ml, and filtered using HGMFs. The membranes were incubated on Miller-Mallinson agar (24 h at 42 degrees C), and typical Salmonella colonies were sonicated in 50% acetonitrile and centrifuged. Resulting pellets were vacuum dried on a ZnSe crystal and analyzed using IR spectroscopy. Alternatively, the membranes containing Salmonella growth were removed from the agar, vacuum dried, and colonies were analyzed directly by IR microspectroscopy. Soft independent modeling of class analogy (SIMCA) models were developed from spectra. The method was validated by analyzing Salmonella-inoculated tomato juice, eggs, milk, and chicken. Salmonella serovars exhibited distinctive and reproducible spectra in the fingerprint region (1,200 to 900 cm(-1)) of the IR spectrum. SIMCA permitted distinguishing Salmonella strains from each other through differences in bacterial lipopolysaccharides and other membrane components. The model correctly predicted Salmonella in foods at serovar (100%) and strain (90%) levels. Isolation of Salmonella on HGMF and selective agar followed by IR spectroscopic analysis resulted in rapid and efficient isolation, identification, and differentiation of

  15. BAT AGN Spectroscopic Survey - IV: Near-Infrared Coronal Lines, Hidden Broad Lines, and Correlation with Hard X-ray Emission

    NASA Astrophysics Data System (ADS)

    Lamperti, Isabella; Koss, Michael; Trakhtenbrot, Benny; Schawinski, Kevin; Ricci, Claudio; Oh, Kyuseok; Landt, Hermine; Riffel, Rogério; Rodríguez-Ardila, Alberto; Gehrels, Neil; Harrison, Fiona; Masetti, Nicola; Mushotzky, Richard; Treister, Ezequiel; Ueda, Yoshihiro; Veilleux, Sylvain

    2017-01-01

    We provide a comprehensive census of the near-Infrared (NIR, 0.8-2.4 μm) spectroscopic properties of 102 nearby (z < 0.075) active galactic nuclei (AGN), selected in the hard X-ray band (14-195 keV) from the Swift-Burst Alert Telescope (BAT) survey. With the launch of the James Webb Space Telescope this regime is of increasing importance for dusty and obscured AGN surveys. We measure black hole masses in 68% (69/102) of the sample using broad emission lines (34/102) and/or the velocity dispersion of the Ca II triplet or the CO band-heads (46/102). We find that emission line diagnostics in the NIR are ineffective at identifying bright, nearby AGN galaxies because ([Fe II] 1.257μm/Paβ and H2 2.12μm/Brγ) identify only 25% (25/102) as AGN with significant overlap with star forming galaxies and only 20% of Seyfert 2 have detected coronal lines (6/30). We measure the coronal line emission in Seyfert 2 to be weaker than in Seyfert 1 of the same bolometric luminosity suggesting obscuration by the nuclear torus. We find that the correlation between the hard X-ray and the [Fe II] coronal line luminosity is significantly better than with the [O III] λ5007 luminosity. Finally, we find 3/29 galaxies (10%) that are optically classified as Seyfert 2 show broad emission lines in the NIR. These AGN have the lowest levels of obscuration among the Seyfert 2s in our sample (log NH < 22.43 cm-2), and all show signs of galaxy-scale interactions or mergers suggesting that the optical broad emission lines are obscured by host galaxy dust.

  16. Annotated bibliography of ellipsometry and optical properties of solids

    NASA Astrophysics Data System (ADS)

    Christensen, T. M.

    1985-05-01

    This bibliography is a partial listing of articles on various aspects of ellipsometry and the optical properties of solids. Additional references can be found in the review articles listed in the first section. The comments about the articles represent the author's particular interest in the article and are by no means intended as complete summaries or even statements of the author's key point in the article. The lack of comments on many of the articles represents the author's inconsistent note-taking or the completeness of the author's title in describing the article. The papers are divided into 10 topical sections and are alphabetized within each section.

  17. Antifreeze glycopeptide adsorption on single crystal ice surfaces using ellipsometry

    PubMed Central

    Wilson, P. W.; Beaglehole, D.; DeVries, A. L.

    1993-01-01

    Antarctic fishes synthesise antifreeze proteins which can effectively inhibit the growth of ice crystals. The mechanism relies on adsorption of these proteins to the ice surface. Ellipsometry has been used to quantify glycopeptide antifreeze adsorption to the basal and prism faces of single ice crystals. The rate of accumulation was determined as a function of time and at concentrations between 0.0005 and 1.2 mg/ml. Estimates of packing density at saturation coverage have been made for the basal and prism faces. PMID:19431902

  18. High temperature phase transitions and critical exponents of Samarium orthoferrite determined by in situ optical ellipsometry

    NASA Astrophysics Data System (ADS)

    Berini, B.; Fouchet, A.; Popova, E.; Scola, J.; Dumont, Y.; Franco, N.; da Silva, R. M. C.; Keller, N.

    2012-03-01

    Determining phase transitions has always been a great challenge in material science due to their important fundamental and technological aspects. Recently, iron-based perovskites (RFeO3), exhibiting phase transitions at high temperatures, have attracted much interest for their functional properties at room temperature, such as multiferroicity (BiFeO3) and ultrafast spin dynamics (TmFeO3). In this family of materials, Samarium orthoferrite (SmFeO3) is a weak ferromagnet, ordering at high temperatures and exhibiting an intrinsic spin reorientation transition above room temperature, which is "hidden" in macroscopic magnetization measurements in polycrystalline samples. In the present article, we show that the related magnetic high temperature phase transitions can be studied through their dielectric functions by spectroscopic ellipsometry in situ and without any need for an applied external magnetic field. The presence of this intrinsic spin reorientation transition is demonstrated for textured SmFeO3 films and we have determined a critical exponent of β = 0.45 ± 0.01 for the magnetic phase transition, coherently from optical, magneto-optical, and structural investigations.

  19. Optical dielectric response of gallium nitride studied by variable angle spectroscopy ellipsometry

    SciTech Connect

    Yao, H.; Yan, C.H.; Jenkinson, H.A.; Zavada, J.M.; Speck, J.S.; Denbaars, S.P.

    1997-12-31

    Variable angle spectroscopic ellipsometry (VASE) and transmission measurements have been employed to study the dielectric response of gallium nitride (GaN) thin films -- an important material for light emitting diodes (LEDs) and laser diodes applications. The GaN films were grown by atmosphere pressure metal organic chemical vapor deposition (MOCVD) on c-plane sapphire substrates ({alpha}-Al{sub 2}O{sub 3}). Room temperature VASE measurements were made, in the range of 0.75 to 5.5eV, at the angle of incidence of 73, 75, and 77 degree, respectively. Evidence of anisotropy is observed especially in the spectral range under the band gap ({approximately}3.4 eV), reflecting the nature of wurtzite crystal structure of GaN. The ordinary dielectric function {var_epsilon}{sub {perpendicular}}({omega}) of GaN were obtained through the analysis of transmission and VASE data in the range below and above the band gap. The thickness of these GaN films is also determined via the analysis.

  20. Spectral ellipsometry studying of iron's optical and electronic properties

    NASA Astrophysics Data System (ADS)

    Chernukha, Yevheniia; Stashchuk, Vasyl S.; Polianska, Olena; Oshtuk, Olexsandr

    2014-05-01

    Fe's optical and electronic properties were investigated at room temperature in different structural states. The sample's surface was explored in wide spectral range λ = 0,23-17,0 μm (E = 4,96 - 0,07 еV ) by the Beatty's spectral ellipsometry method. While an experiment was carried out ellipsometry parameters Δ and ψ were measure near the principal angle of incidence. The refraction index R , permittivity Ɛ and optical conductivity σ( hν ) , that is proportional to the interband density of electronic states, were calculated using these parameters. Fe's optical conductivities in liquid, amorphous and crystalline states were compared in this work. The optical conductivity was calculated using the published data of the iron's density of electronic states in crystalline, amorphous and liquid states for the comparison of the experimental and theoretical results. It is shown that, at structural transformations "amorphous, liquid state- crystalline state", the optical properties of metallic iron are determined, in the first turn, by the nearest neighborhood, and the electronic structure is not subjected to significant modifications.

  1. Analysis of 2D periodic nanostructures with an oxide overlayer via spectroscopic ellipsometry.

    PubMed

    Ghong, T H; Byun, J S; Han, S-H; Chung, J-M; Kim, Y D

    2011-07-01

    The accurate nondestructive determination of the shapes or critical dimensions of periodic nanostructures is essential to the current integrated-circuits technology. Optical critical dimension (OCD) metrology is fast, nondestructive, and can be used in air, allows higher sampling rates compared to the non-optical methods such as scanning electron microscopy (SEM) or atomic-force microscopy (AFM), and does not damage the sample. The data are typically analyzed via rigorous coupled-wave analysis (RCWA), where the sample is modeled as a series of layers whose dimensional parameters are determined by a least-squares fit. The layers are typically approximated as a combination of core material and ambient. Oxide overlayers and surface roughness are common, however, and call into question two-phase approximation. In this study, a structure that is periodic in two dimensions and that is coated with a thin (3 nm) oxide was studied, and an extension of the RCWA method that allows structural information to be extracted from optical data even in the presence of oxide overlayers or surface roughness was developed.

  2. Infrared interference coating by use of Si3N4 and SiO2 films with ion-assisted deposition.

    PubMed

    Lee, Cheng-Chung; Ku, Shih-Liang

    2010-01-20

    Silicon nitride (Si(3)N(4)) and silicon dioxide (SiO(2)) films were prepared by ion-assisted deposition, and a higher deposition rate was achieved for both films. The results of x-ray diffraction and transmission electron microscopy measurements showed that the films have amorphous structures. As measured by infrared (IR) spectrometry and x-ray photoelectron spectrometry, both stoichiometric films have extremely low hydrogen content. The IR optical constants of the films were determined by spectroscopic ellipsometry. Both films exhibited a low extinction coefficient at wavelengths from 2 to 7 microm. The application of Si(3)N(4) and SiO(2) films on the IR interference coating is demonstrated.

  3. A flexible experimental setup for femtosecond time-resolved broad-band ellipsometry and magneto-optics

    SciTech Connect

    Boschini, F.; Hedayat, H.; Piovera, C.; Dallera, C.; Gupta, A.; Carpene, E.

    2015-01-15

    A versatile experimental setup for femtosecond time-resolved ellipsometry and magneto-optical Kerr effect measurements in the visible light range is described. The apparatus is based on the pump-probe technique and combines a broad-band probing beam with an intense near-infrared pump. According to Fresnel scattering matrix formalism, the analysis of the reflected beam at different polarization states of the incident probe light allows one to determine the diagonal and the off-diagonal elements of the dielectric tensor in the investigated sample. Moreover, the pump-probe method permits to study the dynamics of the dielectric response after a short and intense optical excitation. The performance of the experimental apparatus is tested on CrO{sub 2} single crystals as a benchmark.

  4. A Comparison of Near- and Mid-Infrared Spectroscopic Methods for the Analysis of Several Nutritionally Important Chemical Substances in the Chinese Yam (Dioscorea opposita): Total Sugar, Polysaccharides, and Flavonoids.

    PubMed

    Zhuang, Hua; Ni, Yongnian; Kokot, Serge

    2015-04-01

    The Chinese yam (Dioscorea opposita) is a basic food in Asia and especially China. Consequently, an uncomplicated, reliable method should be available for the analysis of the quality and origin of the yams. Thus, near-infrared (NIR) and mid-infrared (mid-IR) spectroscopic methods were developed to discriminate among Chinese yam samples collected from four geographical regions. The yam samples were analyzed also for total sugar, polysaccharides, and flavonoids. These three analytes were used to compare the performance of the analytical methods. Overlapping spectra were resolved using chemometrics methods. Such spectra were compared qualitatively using principal component analysis (PCA) and quantitatively using partial least squares (PLS) and least squares-support vector machine (LS-SVM) models. We discriminated among the four sets of yam data using PCA, and the NIR data performed somewhat better than the mid-IR data. We constructed the PLS and LS-SVM calibration models for the prediction of the three key variables, and the LS-SVM model produced better results. Also, the NIR prediction model produced better outcomes than the mid-IR prediction model. Thus, both infrared (IR) techniques performed well for the analysis of the three key analytes, and the samples were qualitatively discriminated according to their provinces of origin. Both techniques may be recommended for the analysis of Chinese yams, although the NIR technique would be preferred.

  5. Reflectometry-Ellipsometry Reveals Thickness, Growth Rate, and Phase Composition in Oxidation of Copper.

    PubMed

    Diaz Leon, Juan J; Fryauf, David M; Cormia, Robert D; Zhang, Min-Xian Max; Samuels, Kathryn; Williams, R Stanley; Kobayashi, Nobuhiko P

    2016-08-31

    The oxidation of copper is a complicated process. Copper oxide develops two stable phases at room temperature and standard pressure (RTSP): cuprous oxide (Cu2O) and cupric oxide (CuO). Both phases have different optical and electrical characteristics that make them interesting for applications such as solar cells or resistive switching devices. For a given application, it is necessary to selectively control oxide thickness and cupric/cuprous oxide phase volume fraction. The thickness and composition of a copper oxide film growing on the surface of copper widely depend on the characteristics of as-deposited copper. In this Research Article, two samples, copper films prepared by two different deposition techniques, electron-beam evaporation and sputtering, were studied. As the core part of the study, the formation of the oxidized copper was analyzed routinely over a period of 253 days using spectroscopic polarized reflectometry-spectroscopic ellipsometry (RE). An effective medium approximation (EMA) model was used to fit the RE data. The RE measurements were complemented and validated by using X-ray photoelectron spectroscopy (XPS), atomic force microscopy (AFM) and X-ray diffraction (XRD). Our results show that the two samples oxidized under identical laboratory ambient conditions (RTSP, 87% average relative humidity) developed unique oxide films following an inverse-logarithmic growth rate with thickness and composition different from each other over time. Discussion is focused on the ability of RE to simultaneously extract thickness (i.e., growth rate) and composition of copper oxide films and on plausible physical mechanisms responsible for unique oxidation habits observed in the two copper samples. It appears that extended surface characteristics (i.e., surface roughness and grain boundaries) and preferential crystalline orientation of as-deposited polycrystalline copper films control the growth kinetics of the copper oxide film. Analysis based on a noncontact

  6. Imaging Mie ellipsometry: dynamics of nanodust clouds in an argon-acetylene plasma

    NASA Astrophysics Data System (ADS)

    Greiner, Franko; Carstensen, Jan; Köhler, Nils; Pilch, Iris; Ketelsen, Helge; Knist, Sascha; Piel, Alexander

    2012-12-01

    For the in situ analysis of nano-sized particles in a laboratory plasma, Mie ellipsometry is a well established technique. We present a simple setup with two CCD cameras to gain online spatiotemporal resolved information of the growth dynamics of particles which are produced by plasma chemical processes in an argon-acetylene plasma. Imaging Mie ellipsometry proves to be a powerful technique to study the growth processes of nanodust in all its details.

  7. Inversion of ellipsometry data using constrained spline analysis.

    PubMed

    Gilliot, Mickaël

    2017-02-01

    Ellipsometry is a highly sensitive and powerful optical technique of thin film characterization. However, the indirect and nonlinear character of the ellipsometric equations requires numerical extraction of interesting information, such as thicknesses and optical constants of unknown layers. A method is described to perform the inversion of ellipsometric spectra for the simultaneous determination of thickness and optical constants without requiring particular assumptions about the shape of a model dielectric function like in the traditional method of data fitting. The method is based on a Kramers-Kronig consistent description of the imaginary part of the dielectric function using a set of points joined by pieces of third-degree polynomials. Particular connection relations constrain the shape of the constructed curve to a physically meaningful curve avoiding oscillations of natural cubic splines. The connection ordinates conditioning the shape of the dielectric function can be used, together with unknown thickness or roughness, as fitting parameters with no restriction on the material nature. Typical examples are presented concerning metal and semiconductors.

  8. Structural investigations of human hairs by spectrally resolved ellipsometry

    NASA Astrophysics Data System (ADS)

    Chan, Danny; Schulz, Benjamin; Rübhausen, Michael; Wessel, Sonya; Wepf, Roger

    2006-01-01

    Human hair is a biological layered system composed of two major layers, the cortex and the cuticle. We show spectrally resolved ellipsometry measurements of the ellipsometric parameters Ψ and Δ of single human hairs. The spectra reflect the layered nature of hair and the optical anisotropy of the hair's structure. In addition, measurements on strands of human hair show a high reproducibility of the ellipsometric parameters for different hair fiber bundles from the same person. Based on the measurements, we describe a dielectric model of hair that explains the spectra in terms of the dielectric properties of the major parts of hair and their associated layer thicknesses. In addition, surface roughness effects modeled by a roughness layer with a complex refractive index given by an effective medium approach can be seen to have a significant effect on the measurements. We derive values for the parameters of the cuticle surface roughness layer of the thickness dACu=273 to 360 nm and the air inclusion fA=0.6 to 5.7%.