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Sample records for infrared spectroscopic ellipsometry

  1. Rotatable broadband retarders for far infrared spectroscopic ellipsometry

    SciTech Connect

    Kang, T.D.; Carr, G.; Zhou, T.; Kotelyanskii, M.; Sirenko, A.A.

    2010-12-09

    Rotatable retarders have been developed for applications in spectroscopic, full Mueller Matrix ellipsometry in the far-IR spectral range. Several materials, such as silicon, KRS-5, and a commercial polymer plastic (TOPAS) have been utilized to achieve a fully adjustable retardation between 0{sup o} and 90{sup o}. Experimental characteristics of the rotatable retarders that utilize three- and four-bounce designs are compared with calculations. We discuss the effect of light focusing on the performance of these rotatable retarders. Broadband optical retarders are required for spectroscopic ellipsometry in its full Mueller matrix (MM) realization. Performance of the MM ellipsometer depends on the capability to produce substantially linearly-independent Stokes vectors for the light incident onto the sample. As has been shown, the errors in the measuredMMof the sample are proportional to the condition number of the 4 x 4 matrix composed of the Stokes vectors of four polarization states incident at the sample. It can be proven that it is impossible to cover the Poincare sphere with linearly-independent Stokes vectors by only changing the linear polarization at the input surface of a stationary retarder. As we will illustrate further in this paper, total coverage of the Poincare sphere is possible by rotating a tandem of a linear polarizer and a retarder with a retardation of 90{sup o}. It is this goal that we are trying to achieve in the retarder designs described in this paper.

  2. Infrared spectroscopic ellipsometry of micrometer-sized SiO2 line gratings

    NASA Astrophysics Data System (ADS)

    Walder, Cordula; Zellmeier, Matthias; Rappich, Jörg; Ketelsen, Helge; Hinrichs, Karsten

    2017-09-01

    For the design and process control of periodic nano-structured surfaces spectroscopic ellipsometry is already established in the UV-VIS spectral regime. The objective of this work is to show the feasibility of spectroscopic ellipsometry in the infrared, exemplarily, on micrometer-sized SiO2 line gratings grown on silicon wafers. The grating period ranges from 10 to about 34 μm. The IR-ellipsometric spectra of the gratings exhibit complex changes with structure variations. Especially in the spectral range of the oxide stretching modes, the presence of a Rayleigh singularity can lead to pronounced changes of the spectrum with the sample geometry. The IR-ellipsometric spectra of the gratings are well reproducible by calculations with the RCWA method (Rigorous Coupled Wave Analysis). Therefore, infrared spectroscopic ellipsometry allows the quantitative characterization and process control of micrometer-sized structures.

  3. Spectroscopic rotating compensator ellipsometry in the infrared: retarder design and measurement

    NASA Astrophysics Data System (ADS)

    den Boer, J. H. W. G.; Kroesen, G. M. W.; de Hoog, F. J.

    1997-05-01

    Rotating compensator ellipsometry (RCE) is an approach to ellipsometry that is superior to the widely used rotating analyser ellipsometry (RAE). An essential component in RCE is a retarder that generates a retardance close to 0957-0233/8/5/004/img1. In contrast to RCE at a single wavelength, spectroscopic RCE requires a retarder that performs well over a wide range of the used spectrum. The designed retarder is capable of this and works on the principle of total internal reflection. Making use of this retarder, RCE is tested by measuring the optical characteristics of a Teflon-like layer on an aluminium substrate. The results show good agreement with similar RAE measurements, as well as data calculated from an ellipsometric model.

  4. Probing the carrier concentration profiles in phosphorus-implanted germanium using infrared spectroscopic ellipsometry

    SciTech Connect

    D'Costa, Vijay Richard Yeo, Yee-Chia

    2015-02-21

    Spectroscopic ellipsometry with photon energy in the 0.045–0.65 eV range was used to investigate germanium samples implanted with 30 keV phosphorus ions and annealed at 700 °C. The infrared response of implanted layers is dominated by free carrier absorption which is modeled using a Drude oscillator. The carrier concentration profiles were modeled using an error function, and compared with those obtained by electrochemical capacitance-voltage profiling and secondary ion mass spectrometry. In the flat region of the carrier concentration profile, average carrier concentration and mobility of 1.40 × 10{sup 19} cm{sup −3} and 336 cm{sup 2}V{sup −1}s{sup −1}, respectively, were obtained. A phosphorus diffusivity of ∼1.2 × 10{sup −13} cm{sup 2}/s was obtained. The mobility versus carrier concentration relationships obtained for the implanted samples are close to the empirical relationship for bulk Ge.

  5. Optical constants of neat liquid-chemical warfare agents and related materials measured by infrared spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Yang, C. S.-C.; Williams, B. R.; Hulet, M. S.; Tiwald, T. E.; Miles, R. W., Jr.; Samuels, A. C.

    2011-05-01

    We studied various liquids using a vertical attenuated total reflection (ATR) liquid sampling assembly in conjunction with Infrared Variable Angle Spectroscopic Ellipsometry (IR-VASE), to determine the infrared optical constants of several bulk liquids related to chemical warfare. The index of refraction, n, and the extinction coefficient, k, of isopropyl methylphosphonofluoridate (Sarin or GB), isopropyl alcohol (IPA) (a precursor of GB), and dimethyl methylphosphonate (DMMP)-a commonly employed simulant for GB, measured by our vertical ATR IR-VASE setup are closely matched to those found in other studies. We also report the optical constants of cyclohexyl methylphosphonofluoridate (GF), 2-(diisopropylamino)ethyl methylphosphonothioate (VX), bis-(2-chloroethyl) sulfide (HD), and 2-chlorovinyl dichloroarsine (L, Lewisite). The ATR IR-VASE technique affords an accurate measurement of the optical constants of these hazardous compounds.

  6. Fine characterization of ITO layers by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.; Suzuki, Y.

    1996-08-01

    Indium tin oxide films (ITO) are characterized precisely by spectroscopic ellipsometry which determines not only the thickness of the layers but also the optical indices in a large spectral range. The quality of the ITO films is checked by the transparency of the layers in the visible range 0.4 to 0.6 micrometers . Indeed, target degradation is detected by the occurrence of an absorption band in this region. The electrical conductivity of the layer can also be deduced by the Drude model applied to the absorption in the infrared region. Moreover, spectroscopic ellipsometry can give all these information on all the surface of the panels, checking at the same time the homogeneity and the stability of the deposition process. Different experimental examples will be presented and discussed.

  7. Optical constants, band gap, and infrared-active phonons of (LaAlO{sub 3}){sub 0.3}(Sr{sub 2}AlTaO{sub 6}){sub 0.35} (LSAT) from spectroscopic ellipsometry

    SciTech Connect

    Nunley, Timothy Nathan; Willett-Gies, Travis I.; Cooke, Jacqueline A.; Zollner, Stefan; Manciu, Felicia S.; Marsik, Premysl; Bernhard, Christian

    2016-09-15

    Using spectroscopic ellipsometry, the authors determined the optical constants (complex dielectric function) for (LaAlO{sub 3}){sub 0.3}(Sr{sub 2}AlTaO{sub 6}){sub 0.35} (LSAT) from 0.01 to 6.5 eV. Above 0.5 eV, the data were described with a sum of two Tauc-Lorentz oscillators and two poles. A direct gap of 5.8 ± 0.1 eV was found. An Urbach tail extends to even lower photon energies and makes the crystal opaque above 4.8 eV. Using Fourier-transform infrared ellipsometry, the lattice dynamics was studied. Nine pairs of transverse/longitudinal phonons were found and attributed to disorder in the La/Sr sublattice, ordering in the Al/Ta sublattice, and two-phonon absorption.

  8. Infrared dielectric functions, phonon modes, and free-charge carrier properties of high-Al-content AlxGa1-xN alloys determined by mid infrared spectroscopic ellipsometry and optical Hall effect

    NASA Astrophysics Data System (ADS)

    Schöche, S.; Hofmann, T.; Nilsson, D.; Kakanakova-Georgieva, A.; Janzén, E.; Kühne, P.; Lorenz, K.; Schubert, M.; Darakchieva, V.

    2017-05-01

    We report on the analysis of a combined mid-infrared spectroscopic ellipsometry and mid-infrared optical Hall effect investigation of wurtzite structure c-plane oriented, crack-free, single crystalline, and high-Al-content AlxGa1-xN layers on 4H-SiC. For high-Al-content AlxGa1-xN, a two mode behavior is observed for both transverse and longitudinal branches of the infrared-active modes with E1 symmetry, while a single mode behavior is found for the longitudinal modes with A1(LO) symmetry. We report their mode dependencies on the Al content. We determine and discuss static and high frequency dielectric constants depending on x. From the analysis of the optical Hall effect data, we determine the effective mass parameter in high-Al-content AlxGa1-xN alloys and its composition dependence. Within the experimental uncertainty limits, the effective mass parameters are found isotropic, which depend linearly on the Al content. The combination of all data permits the quantification of the free electron density N and mobility parameters μ.

  9. Spectroscopic ellipsometry as a sensitive monitor of materials contamination

    NASA Technical Reports Server (NTRS)

    Hale, Jeffrey S.; Hilfiker, James N.; Spady, Blaine; Synowicki, R.; Woollam, John A.

    1995-01-01

    Spectroscopic ellipsometry is demonstrated to be extremely sensitive to contamination layers in the thickness range from 0.1 nm to 10 microns. In the present experiments we deposit either a thin lubricating oil (WD-40) or mineral oil continuously onto Ir, Cu, Al, Au, and V substrates from a bubbler, and monitor its thickness growth from sub-nanometer to tens of nanometers as a function of time. Re-evaporation of contaminant oils is also monitored in real-time by ellipsometry.

  10. Spectroscopic ellipsometry analysis of silicon nanotips obtained by electron cyclotron resonance plasma etching.

    PubMed

    Mendoza-Galván, Arturo; Järrendahl, Kenneth; Arwin, Hans; Huang, Yi-Fan; Chen, Li-Chyong; Chen, Kuei-Hsien

    2009-09-10

    Silicon nanotips fabricated by electron cyclotron resonance plasma etching of silicon wafers are studied by spectroscopic ellipsometry. The structure of the nanotips is composed of columns 100-140 nm wide and spaced by about 200 nm. Ellipsometry data covering a wide spectral range from the midinfrared to the visible are described by modeling the nanotip layer as a graded uniaxial film using the Bruggeman effective medium approximation. The ellipsometry data in the infrared range reveal two absorption bands at 754 and 955 cm(-1), which cannot be resolved with transmittance measurements. These bands indicate that the etching process is accompanied with formation of carbonaceous SiC and CH(n) species that largely modify the composition of the original crystalline silicon material affecting the optical response of the nanotips.

  11. Characterization of semicrystalline polymers after nanoimprint by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Wang, Si; Rond, Johannes; Steinberg, Christian; Papenheim, Marc; Scheer, Hella-Christin

    2016-02-01

    Semicrystalline Reg-P3HT (regio-regular poly-3-hexylthiophene) is a promising material for organic electronics. It features relatively high charge mobility and enables easy preparation because of its solubility. Due to its high optical and electrical anisotropy, the size, number and orientation of the ordered domains are important for applications. To control these properties without limitation from crystalline domains existing after spin coating, thermal nanoimprint is performed beyond the melting point. The state of the art of measurement to analyze the complex morphology is X-ray diffraction (XRD). We address an alternative measurement method to characterize the material by its optical properties, spectroscopic ellipsometry. It provides information on the degree of order from the typical fingerprint absorption spectrum. In addition, when the material is modeled as a uniaxial layer, an anisotropy factor can be derived. The results obtained from spectroscopic ellipsometry are in accordance with those from XRD. In particular, spectroscopic ellipsometry is able to distinguish between order along the backbone and order in π- π stacking direction, which is important with respect to conductivity.

  12. Evaluation of the SEI using a multilayer spectroscopic ellipsometry model

    SciTech Connect

    Eric J. Dufek

    2014-08-01

    A multilayer spectroscopic ellipsometry (SE) model has been developed to characterize SEI formation. The model, which consists of two Cauchy layers, is constructed with an inner layer meant to model primarily inorganic compounds adjacent to an electrode and an outer layer which mirrors polymeric, organic constituents on the exterior of the SEI. Comparison of 1:1 EC:EMC and 1:4 EC:EMC with 1.0 M LiPF6 shows distinct differences in the two modeled layers. The data suggest that the thickness of both layers change over a wide potential range. These changes have been linked with other reports on the growth of the SEI.

  13. Evaluation of the SEI using a multilayer spectroscopic ellipsometry model

    DOE PAGES

    Dufek, Eric J.

    2014-08-28

    A multilayer spectroscopic ellipsometry (SE) model has been developed to characterize SEI formation. The model, which consists of two Cauchy layers, is constructed with an inner layer meant to model primarily inorganic compounds adjacent to an electrode and an outer layer which mirrors polymeric, organic constituents on the exterior of the SEI. Comparison of 1:1 EC:EMC and 1:4 EC:EMC with 1.0 M LiPF₆ shows distinct differences in the two modeled layers. The data suggest that the thickness of both layers change over a wide potential range. These changes have been linked with other reports on the growth of the SEI.

  14. Measuring liquid crystal anchoring energy strength by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Marino, A.; Tkachenko, V.; Santamato, E.; Bennis, N.; Quintana, X.; Otón, J. M.; Abbate, G.

    2010-04-01

    We describe an experimental procedure for accurate measurement of anchoring energy strength of liquid crystal cells. This technique is based on the possibility of gathering a large amount of very precise data about the linear optical response of the cell in different experimental conditions, using spectroscopic ellipsometry. Then, a careful data analysis exploiting data inversion method, supplemented by simulations from the elastic theory, is able to provide the searched information. The technique has been applied to vertical aligned nematic cells, chosen for its widespread use in the present display market. The results obtained in this particular case together with a thorough comparison with existing alternative techniques, suggest that our technique can be an optimum candidate for the industrial implementation of such measurement. A particular example is fully worked out, giving a result with a precision of 1.5% and an accuracy of 10%.

  15. Spectroscopic Ellipsometry Studies of n-i-p Hydrogenated Amorphous Silicon Based Photovoltaic Devices

    PubMed Central

    Karki Gautam, Laxmi; Junda, Maxwell M.; Haneef, Hamna F.; Collins, Robert W.; Podraza, Nikolas J.

    2016-01-01

    Optimization of thin film photovoltaics (PV) relies on characterizing the optoelectronic and structural properties of each layer and correlating these properties with device performance. Growth evolution diagrams have been used to guide production of materials with good optoelectronic properties in the full hydrogenated amorphous silicon (a-Si:H) PV device configuration. The nucleation and evolution of crystallites forming from the amorphous phase were studied using in situ near-infrared to ultraviolet spectroscopic ellipsometry during growth of films prepared as a function of hydrogen to reactive gas flow ratio R = [H2]/[SiH4]. In conjunction with higher photon energy measurements, the presence and relative absorption strength of silicon-hydrogen infrared modes were measured by infrared extended ellipsometry measurements to gain insight into chemical bonding. Structural and optical models have been developed for the back reflector (BR) structure consisting of sputtered undoped zinc oxide (ZnO) on top of silver (Ag) coated glass substrates. Characterization of the free-carrier absorption properties in Ag and the ZnO + Ag interface as well as phonon modes in ZnO were also studied by spectroscopic ellipsometry. Measurements ranging from 0.04 to 5 eV were used to extract layer thicknesses, composition, and optical response in the form of complex dielectric function spectra (ε = ε1 + iε2) for Ag, ZnO, the ZnO + Ag interface, and undoped a-Si:H layer in a substrate n-i-p a-Si:H based PV device structure. PMID:28773255

  16. Characterization by spectroscopic Ellipsometry, the physical properties of silver nanoparticles.

    NASA Astrophysics Data System (ADS)

    Coanga, Jean-Maurice

    2013-04-01

    Physicists are able to change their minds through their experiments. I think it is time to go kick the curse and go further in research if we want a human future. I work in the Nano-Optics and Plasmonics research. I defined with ellipsomètrie the structure of new type of Nano particles of silver. It's same be act quickly to replace the old dirty leaded electronic-connexion chip and by the other hand to find a new way for the heath care of cancer disease by nanoparticles the next killers of bad cells. Silver nanoparticle layers are obtained by Spark Plasma Sintering are investigated as an alternative to lead alloy based material for solder joint in power mechatronics modules. These layers are characterized by mean of conventional techniques that is the dilatometry technique, the resistivity measurement through the van der Pauw method, and the flash laser technique. Furthermore, the nanoparticles of silver layer are deeply studied by UV-Visible spectroscopic ellipsometry. Spectroscopic angles parameters are determined in function of temperature and dielectric constants are deduced and analyzed through an optical model which takes into account a Drude and a Lorentz component within the Bruggeman effective medium approximation (EMA). The relaxation times and the electrical conductivity are plot in function of temperature. The obtained electrical conductivity give significant result in good agreement to those reported by four points electrical measurement method.

  17. Low Temprature Growth of Silicon Dioxide Films: A Study of Chemical Bonding by Ellipsometry and Infrared Spectroscopy.

    DTIC Science & Technology

    1986-07-29

    City , State and ZIP CodeI 7b. ADDRESS ( City , State and ZIP Code) 11-3 Venable Hall 045A Chemistry Program Chapel Hill, NC 27514 800 N. Quincy Street...SUB GR 19 A %STRACT ’Contlinue on reerse if necessary and identify b) biock nmirber; 2 :-his paper presents a spectroscopic study using the techniques...Chapel Hill NC 27514 ABSTRACT This paper presents a spectroscopic study using the techniques of ellipsometry and infrared (ir) absorption spectroscopy of

  18. Infrared ellipsometry of nanometric anisotropic dielectric layers on absorbing materials

    NASA Astrophysics Data System (ADS)

    Adamson, Peep

    2014-05-01

    An inversion problem of infrared ellipsometry is resolved on the basis of a fresh mathematical approach, which does not use the traditional regression analysis for data handling and has no need of initial guesses for the desired parameters. It is shown that obtained simple analytical equations for ellipsometric quantities open up new possibilities for determining optical parameters of an anisotropic ultrathin layer. The novel method possesses very high sensitivity because it is based on the phase conversion measurements of polarized reflected light. The method is tested using a numerical simulation and the results demonstrate clearly that it is successfully applicable for nanometric layers in the infrared spectral region.

  19. Optical properties of InN studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Chunya, Ye; Wei, Lin; Jin, Zhou; Shuping, Li; Li, Chen; Heng, Li; Xiaoxuan, Wu; Songqing, Liu; Junyong, Kang

    2016-10-01

    With recently developed InN epitaxy via a controlling In bilayer, spectroscopic ellipsometry (SE) measurements had been carried out on the grown InN and the measured ellipsometric spectra were fitted with the Delta Psi2 software by using a suitable model and the dispersion rule. The thickness was measured by a scanning electron microscope (SEM). Insight into the film quality of InN and the lattice constant were gained by X-ray diffraction (XRD). By fitting the SE, the thickness of the InN film is consistent with that obtained by SEM cross-sectional thickness measurement. The optical bandgap of InN was put forward to be 1.05 eV, which conforms to the experimental results measured by the absorption spectrum and cathodoluminescence (CL). The refractive index and the extinction coefficient of interest were represented for InN, which is useful to design optoelectronic devices. Project supported by the State Key Development Program for Basic Research of China (No. 2012CB619301), the National High Technology Research and Development Program of China (No. 2014AA032608), the National Natural Science Foundation of China (Nos. 11204254, 11404271), and the Fundamental Research Funds for the Central Universities (Nos. 2012121014, 20720150027).

  20. Spectroscopic ellipsometry studies of HF treated Si (100) surfaces

    NASA Astrophysics Data System (ADS)

    Yao, Huade; Woollam, John A.; Alterovitz, Samuel A.

    1993-08-01

    Both ex situ and in situ spectroscopic ellipsometry (SE) measurements were employed to investigate the effects of HF cleaning on Si surfaces. The hydrogen-terminated (H-terminated) Si surface was modeled as an equivalent dielectric layer, and monitored in real time by SE measurements. The SE analyses indicate that after a 20-s 9:1 HF dip without rinse, the Si(100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si(100) surface was observed, in an ultrahigh vacuum (UHV) chamber, and analyzed by the in situ SE. Evidence for desorption of the H-terminated Si surface-layer, after being heated to approximately 550 C in the UHV chamber, is presented and discussed. This is the first use of an ex situ and in situ real-time, nondestructive technique capable of showing state of passivation, the rate of reoxidation, and the surface roughness of the H-terminated Si surfaces.

  1. Spectroscopic ellipsometry studies of HF treated Si (100) surfaces

    NASA Astrophysics Data System (ADS)

    Yao, Huade; Woollam, John A.; Alterovitz, Samuel A.

    1993-06-01

    Both ex situ and in situ spectroscopic ellipsometry (SE) measurements were employed to investigate the effect of HF cleaning on Si surfaces. The hydrogen-terminated (H-terminated) Si surface was modeled as an equivalent dielectric layer, and monitored in real time by SE measurements. The SE analyses indicate that, after a 20-sec 9:1 HF dip without rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed, in an ultrahigh vacuum chamber (UHV), and analyzed by the in situ SE. Evidence for desorption of the H-terminated Si surface layer, after being heated to about 550 C in the UHV chamber, is presented and discussed. This is the first use of an ex situ and in situ real-time, nondestructive technique capable of showing state of passivation, the rate of reoxidation, and the surface roughness of the H-terminated Si surfaces.

  2. Terahertz time-domain spectroscopic ellipsometry: instrumentation and calibration.

    PubMed

    Neshat, Mohammad; Armitage, N P

    2012-12-17

    We present a new instrumentation and calibration procedure for terahertz time-domain spectroscopic ellipsometry (THz-TDSE) that is a newly established characterization technique. The experimental setup is capable of providing arbitrary angle of incidence in the range of 15°-85° in the reflection geometry, and with no need for realignment. The setup is also configurable easily into transmission geometry. For this setup, we successfully used hollow core photonic band gap fiber with no pre-chirping in order to deliver a femtosecond laser into a THz photoconductive antenna detector, which is the first demonstration of this kind. The proposed calibration scheme can compensate for the non-ideality of the polarization response of the THz photoconductive antenna detector as well as that of wire grid polarizers used in the setup. In the calibration scheme, the ellipsometric parameters are obtained through a regression algorithm which we have adapted from the conventional regression calibration method developed for rotating element optical ellipsometers, and used here for the first time for THz-TDSE. As a proof-of-principle demonstration, results are presented for a high resistivity silicon substrate as well as an opaque Si substrate with a high phosphorus concentration. We also demonstrate the capacity to measure a few micron thick grown thermal oxide on top of Si. Each sample was characterized by THz-TDSE in reflection geometry with different angle of incidence.

  3. Photomask CD and LER characterization using Mueller matrix spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Heinrich, A.; Dirnstorfer, I.; Bischoff, J.; Meiner, K.; Ketelsen, H.; Richter, U.; Mikolajick, T.

    2014-10-01

    Critical dimension and line edge roughness on photomask arrays are determined with Mueller matrix spectroscopic ellipsometry. Arrays with large sinusoidal perturbations are measured for different azimuth angels and compared with simulations based on rigorous coupled wave analysis. Experiment and simulation show that line edge roughness leads to characteristic changes in the different Mueller matrix elements. The influence of line edge roughness is interpreted as an increase of isotropic character of the sample. The changes in the Mueller matrix elements are very similar when the arrays are statistically perturbed with rms roughness values in the nanometer range suggesting that the results on the sinusoidal test structures are also relevant for "real" mask errors. Critical dimension errors and line edge roughness have similar impact on the SE MM measurement. To distinguish between both deviations, a strategy based on the calculation of sensitivities and correlation coefficients for all Mueller matrix elements is shown. The Mueller matrix elements M13/M31 and M34/M43 are the most suitable elements due to their high sensitivities to critical dimension errors and line edge roughness and, at the same time, to a low correlation coefficient between both influences. From the simulated sensitivities, it is estimated that the measurement accuracy has to be in the order of 0.01 and 0.001 for the detection of 1 nm critical dimension error and 1 nm line edge roughness, respectively.

  4. Spectroscopic ellipsometry studies of HF treated Si (100) surfaces

    NASA Technical Reports Server (NTRS)

    Yao, Huade; Woollam, John A.; Alterovitz, Samuel A.

    1993-01-01

    Both ex situ and in situ spectroscopic ellipsometry (SE) measurements were employed to investigate the effects of HF cleaning on Si surfaces. The hydrogen-terminated (H-terminated) Si surface was modeled as an equivalent dielectric layer, and monitored in real time by SE measurements. The SE analyses indicate that after a 20-s 9:1 HF dip without rinse, the Si(100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si(100) surface was observed, in an ultrahigh vacuum (UHV) chamber, and analyzed by the in situ SE. Evidence for desorption of the H-terminated Si surface-layer, after being heated to approximately 550 C in the UHV chamber, is presented and discussed. This is the first use of an ex situ and in situ real-time, nondestructive technique capable of showing state of passivation, the rate of reoxidation, and the surface roughness of the H-terminated Si surfaces.

  5. Microcrystalline silicon thin films studied using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Kang, T. D.; Lee, Hosun; Park, S. J.; Jang, J.; Lee, Soonil

    2002-09-01

    We used spectroscopic ellipsometry to characterize four different microcrystalline silicon (muc-Si) films, which were fabricated by crystallizing a-Si:H films predeposited on glass substrates using solid phase crystallization (SPC), excimer laser annealing (ELA), Ni induced silicide-mediated crystallization (Ni-SMC), and field enhanced silicide-mediated crystallization (FESMC) method, respectively. A linear regression analysis, which took the effective dielectric function of muc-Si layer into account using effective medium approximation, showed that all these films were homogeneous throughout their thickness except the oxide overlayers, and completely crystallized regardless of the crystallization method. In our linear regression analysis, the complex dielectric function of silicon microcrystallites was represented by the Adachi model dielectric function (MDF) [T. Suzuki and S. Adachi, Jpn. J. Appl. Phys., Part1 32, 4900 (1993)], and the broadening parameters of the critical points (CPs) in MDF were allowed to vary. The dielectric function of silicon microcrystallites showed systematic broadening and shrinking of the peak features corresponding to the E1 and E2 CPs, from which we concluded that the average microcrystallite size increased in the order of SPC, ELA, Ni-SMC, and FESMC muc-Si. The Raman spectra and the transmission-electron-microscopy images of these films also supported the idea of systematic variation in the microcrystallite size.

  6. Imaging spectroscopic ellipsometry of MoS2

    NASA Astrophysics Data System (ADS)

    Funke, S.; Miller, B.; Parzinger, E.; Thiesen, P.; Holleitner, A. W.; Wurstbauer, U.

    2016-09-01

    Micromechanically exfoliated mono- and multilayers of molybdenum disulfide (MoS2) are investigated by spectroscopic imaging ellipsometry. In combination with knife edge illumination, MoS2 flakes can be detected and classified on arbitrary flat and also transparent substrates with a lateral resolution down to 1-2 µm. The complex dielectric functions from mono- and trilayer MoS2 are presented. They are extracted from a multilayer model to fit the measured ellipsometric angles employing an anisotropic and an isotropic fit approach. We find that the energies of the critical points of the optical constants can be treated to be independent of the utilized model, whereas the magnitude of the optical constants varies with the used model. The anisotropic model suggests a maximum absorbance for a MoS2 sheet supported by sapphire of about 14% for monolayer and of 10% for trilayer MoS2. Furthermore, the lateral homogeneity of the complex dielectric function for monolayer MoS2 is investigated with a spatial resolution of 2 µm. Only minor fluctuations are observed. No evidence for strain, for a significant amount of disorder or lattice defects can be found in the wrinkle-free regions of the MoS2 monolayer from complementary µ-Raman spectroscopy measurements. We assume that the minor lateral variation in the optical constants are caused by lateral modification in the van der Waals interaction presumably caused by the preparation using micromechanical exfoliation and viscoelastic stamping.

  7. Study of biological reaction in cancer cell with spectroscopic imaging ellipsometry

    NASA Astrophysics Data System (ADS)

    Chen, Yu-Da; Hsu, Hao Yun; Khaleel, Mai Ibrahim; Chang, Yia-Chung; Wu, Chien-Hsun; Wu, Han-Chung

    2016-09-01

    We present experimental studies of live cancer cells via microscopic imaging ellipsometry (MIE). The Rotating Compensator Ellipsometry (RCE) is used for our measurements. Ellipsometry spectra with signals integrated over a 20μm×20μm area in visible range (450nm to 750nm) are obtained with the Optrel MULTISKOP system for both specular reflection and off-specular scattering. The microscopic ellipsometry (ME) images at a few fixed wavelengths within the same range were also analyzed. Dielectric constants for glass slide, culture fluid, and glass cover plate were firstly characterized by spectroscopic ellipsometry measurements, which can be used in the simulation for MIE measurements of cancer cells embedded in the culture fluid and sandwiched between a glass slide and cover plate. The measured ME spectra and images of cancer cells before and after medicine injection are measured and analyzed.

  8. Simultaneous characterization of detector and source imperfections in infrared ellipsometry.

    PubMed

    Wormeester, Herbert; Kole, Pepijn R; Poelsema, Bene

    2009-05-20

    Optical components required for infrared (IR) ellipsometry have distinctly worse characteristics compared to those available for the visible spectrum. The calibration of the optical components used is therefore essential for obtaining reliable results. Here a powerful method is outlined to calibrate simultaneously the polarization characteristics of a source and detector through the synchronous rotation of two polarizers. The performance of this method is to a large degree independent of the quality of (commercially available) polarizers. This renders this method robust and highly suitable for the IR range. Moreover, it is also inherently insensitive toward a nonlinear response of the detector. This enables us to use this method as the first step in the quantification of component imperfections.

  9. Sensitivity analysis for OMOG and EUV photomasks characterized by UV-NIR spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Heinrich, A.; Dirnstorfer, I.; Bischoff, J.; Meiner, K.; Richter, U.; Mikolajick, T.

    2013-09-01

    We investigated the potentials, applicability and advantages of spectroscopic ellipsometry (SE) for the characterization of high-end photomasks. The SE measurements were done in the ultraviolet-near infrared (UVNIR) wavelength range from 300 nm to 980 nm, at angle of incidences (AOI) between 10 and 70° and with a microspot size of 45 x 10 μm2 (AOI=70°). The measured Ψ and 𝛥 spectra were modeled using the rigorous coupled wave analysis (RCWA) to determine the structural parameters of a periodic array, i.e. the pitch and critical dimension (CD). Two different types of industrial photomasks consisting of line/space structures were evaluated, the reflecting extreme ultraviolet (EUV) and the transmitting opaque MoSi on glass (OMOG) mask. The Ψ and 𝛥 spectra of both masks show characteristic differences, which were related to the Rayleigh singularities and the missing transmission diffraction in the EUV mask. In the second part of the paper, a simulation based sensitivity analysis of the Fourier coefficients α and β is presented, which is used to define the required measurement precision to detect a CD deviation of 1%. This study was done for both mask types to investigate the influence of the stack transmission. It was found that sensitivities to CD variations are comparable for OMOG and EUV masks. For both masks, the highest sensitivities appear close to the Rayleigh singularities and significantly increase at very low AOI. To detect a 1% CD deviation for pitches below 150 nm a measurement precision in the order of 0.01 is required. This measurement precision can be realized with advanced optical hardware. It is concluded that UV-NIR ellipsometry is qualified to characterize photomasks down to the 13 nm technology node in 2020.

  10. Characterization of Liquid Crystal Layer and Cholesteric Film by Renormalized Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Kimura, Munehiro; Kamada, Hirokazu; Onuma, Toshihiko; Akahane, Tadashi

    2009-03-01

    Renormalized transmission spectroscopic ellipsometry (RTSE) is used to evaluate the device parameters of liquid crystal display (LCD). To determine the reduced dielectric and elastic constants, threshold voltage, pretilt angle, cell gap, and surface polar anchoring energy coefficient, symmetrically oblique incidence transmission ellipsometry (SOITE) was applied to vertical-alignment (VA) LCD. It is suggested that the rubbing process on the alignment films for VA LCD does not disturb the measurement of the genuine surface polar anchoring energy coefficient. RTSE is also applicable to the determination of the total twist angle of the cholesteric film.

  11. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment

    SciTech Connect

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; Bittrich, Eva; Rauch, Sebastian; Uhlmann, Petra; Eichhorn, Klaus-Jochen; Seeber, Michael; Luzinov, Igor; Kilbey, S. Michael; Lokitz, Bradley S.; Minko, Sergiy; Hinrichs, Karsten

    2015-02-10

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes with high potential for biosensing and biomedical applications are studied by in-situ infrared-spectroscopic ellipsometry (IRSE). IRSE as a highly sensitive non-destructive technique allows us to investigate protein adsorption on polymer brushes in aqueous environment in dependence of external stimuli like temperature and pH. These stimuli are, for instance, relevant in switchable mixed brushes containing poly(N-isopropyl acrylamide) and poly(acrylic acid), respectively. We use such brushes as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. IRSE can distinguish between polymer-specific vibrational bands, which yield insights into the hydration state of the brushes, and changes in the protein-specific amide bands, which are related to changes of the protein secondary structure.

  12. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment

    DOE PAGES

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; ...

    2015-02-10

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes with high potential for biosensing and biomedical applications are studied by in-situ infrared-spectroscopic ellipsometry (IRSE). IRSE as a highly sensitive non-destructive technique allows us to investigate protein adsorption on polymer brushes in aqueous environment in dependence of external stimuli like temperature and pH. These stimuli are, for instance, relevant in switchable mixed brushes containing poly(N-isopropyl acrylamide) and poly(acrylic acid), respectively. We use such brushes as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. IRSE can distinguish between polymer-specific vibrational bands, which yield insights intomore » the hydration state of the brushes, and changes in the protein-specific amide bands, which are related to changes of the protein secondary structure.« less

  13. Thin-film hermeticity - A quantitative analysis of diamondlike carbon using variable angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Orzeszko, S.; De, Bhola N.; Woollam, John A.; Pouch, John J.; Alterovitz, Samuel A.

    1988-01-01

    This paper reports on the successful application of variable-angle spectroscopic ellipsometry to quantitative thin-film hermeticity evaluation. It is shown that, under a variety of film preparations and moisture introduction conditions, water penetrates only a very thin diamondlike carbon (DLC) top surface-roughness region. Thus, DLC is an excellent candidate for use as protective coatings in adverse chemical and aqueous environments.

  14. Optical investigation of reduced graphene oxide by spectroscopic ellipsometry and the band-gap tuning

    NASA Astrophysics Data System (ADS)

    Shen, Y.; Zhou, P.; Sun, Q. Q.; Wan, L.; Li, J.; Chen, L. Y.; Zhang, D. W.; Wang, X. B.

    2011-10-01

    Spectroscopic ellipsometry was used to characterize the optical response of few layer reduced graphene oxide and graphene oxide in visible range. Lorentz oscillator model is added to analyze the ellipsometric parameters. The experiment shows the optical response of few layer reduced graphene oxide and monolayer exfoliated graphene in visible range is quite similar with slight difference due to the structure defects. The Lorentz oscillator model gives experimental support to investigate the band-gap tuning through the reduction process in details.

  15. Parametrization of optical properties of indium-tin-oxide thin films by spectroscopic ellipsometry: Substrate interfacial reactivity

    NASA Astrophysics Data System (ADS)

    Losurdo, M.; Giangregorio, M.; Capezzuto, P.; Bruno, G.; de Rosa, R.; Roca, F.; Summonte, C.; Plá, J.; Rizzoli, R.

    2002-01-01

    Indium-tin-oxide (ITO) films deposited by sputtering and e-gun evaporation on both transparent (Corning glass) and opaque (c-Si, c-Si/SiO2) substrates and in c-Si/a-Si:H/ITO heterostructures have been analyzed by spectroscopic ellipsometry (SE) in the range 1.5-5.0 eV. Taking the SE advantage of being applicable to absorbent substrate, ellipsometry is used to determine the spectra of the refractive index and extinction coefficient of the ITO films. The effect of the substrate surface on the ITO optical properties is focused and discussed. To this aim, a parametrized equation combining the Drude model, which considers the free-carrier response at the infrared end, and a double Lorentzian oscillator, which takes into account the interband transition contribution at the UV end, is used to model the ITO optical properties in the useful UV-visible range, whatever the substrate and deposition technique. Ellipsometric analysis is corroborated by sheet resistance measurements.

  16. Multichannel Spectroscopic Ellipsometry for CdTe Photovoltaics: from Materials and Interfaces to Solar Cells

    NASA Astrophysics Data System (ADS)

    Koirala, Prakash

    Spectroscopic ellipsometry (SE) in the mid-infrared to ultraviolet range has been implemented in order to develop and evaluate optimization procedures for CdTe solar cells at the different stages of fabrication. In this dissertation research, real time SE (RT-SE) has been applied during the fabrication of the as-deposited CdS/CdTe solar cell. Two areas of background research were addressed before undertaking the challenging RT-SE analysis procedures. First, optical functions were parameterized versus temperature for the glass substrate and its overlayers, including three different SnO2 layers. This database has applications not only for RT-SE analysis but also for on-line monitoring of the coated glass itself at elevated temperature. Second, post-deposition modifications of substrate have been studied by infrared spectroscopic ellipsometry (IR-SE) prior to the RT-SE analysis in order to evaluate the need for such modification in the analysis. With support from these background studies, RT-SE has been implemented in analyses of the evolution of the thin film structural properties during sputter deposition of polycrystalline CdS/CdTe solar cells on the transparent conducting oxide (TCO) coated glass substrates. The real time optical spectra collected during CdS/CdTe deposition were analyzed using the optical property database for all substrate components as a function of measurement temperature. RT-SE enables characterization of the filling process of the surface roughness modulations on the top-most SnO2 substrate layer, commonly referred to as the high resistivity transparent (HRT) layer. In this filling process, the optical properties of this surface layer are modified in accordance with an effective medium theory. In addition to providing information on interface formation to the substrate during film growth, RT-SE also provides information on the bulk layer CdS growth, its surface roughness evolution, as well as overlying CdTe interface formation and bulk layer

  17. Electronic and structural properties of molybdenum thin films as determined by real-time spectroscopic ellipsometry

    SciTech Connect

    Walker, J. D.; Khatri, H.; Ranjan, V.; Li Jian; Collins, R. W.; Marsillac, S.

    2009-04-06

    Real-time spectroscopic ellipsometry (RTSE) is shown to be an effective contactless probe of radio frequency magnetron sputtered molybdenum thin films used as the back electrode in chalcopyrite [Cu(In,Ga)Se{sub 2}] solar cells. A series of Mo thin films was sputtered onto soda-lime glass substrates at Ar pressures ranging from 4 to 20 mTorr. RTSE measurements reveal how Ar pressure affects the nucleation and growth mechanisms that influence the films' ultimate grain structure and properties. Determinations of the free electron relaxation times at optical frequencies reveal that higher pressures lead to a smaller average grain size and increased void volume fraction.

  18. Study of InGaAs based MODFET structures using variable angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Alterovitz, S. A.; Sieg, R. M.; Yao, H. D.; Snyder, P. G.; Woollam, J. A.; Pamulapati, J.; Bhattacharya, P. K.; Sekula-Moise, P. A.

    1991-01-01

    Variable angle spectroscopic ellipsometry was used to estimate the thicknesses of all layers within the optical penetration depth of InGaAs based MODFET structures. Strained and unstrained InGaAs channels were made by MBE on InP substrates and by MOCVD on GaAs substrates. In most cases, ellipsometrically determined thicknesses were within 10 percent of the growth calibration results. The MBE made InGaAs strained layers showed large strain effects, indicating a probable shift in the critical points of their dielectric function toward the InP lattice matched concentration.

  19. Spectroscopic ellipsometry investigations of optical anisotropy in obliquely deposited hafnia thin films

    SciTech Connect

    Tokas, R. B. Jena, Shuvendu; Thakur, S.; Sahoo, N. K.; Haque, S. Maidul; Rao, K. Divakar

    2016-05-23

    In present work, HfO{sub 2} thin films have been deposited at various oblique incidences on Si substrates by electron beam evaporation. These refractory oxide films exhibited anisotropy in refractive index predictably due to special columnar microstructure. Spectroscopic ellipsometry being a powerful tool for optical characterization has been employed to investigate optical anisotropy. It was observed that the film deposited at glancing angle (80°) exhibits the highest optical anisotropy. Further, anisotropy was noticed to decrease with lower values of deposition angles while effective refractive index depicts opposite trend. Variation in refractive index and anisotropy has been explained in light of atomic shadowing during growth of thin films at oblique angles.

  20. Modeled optical properties of SiGe and Si layers compared to spectroscopic ellipsometry measurements

    NASA Astrophysics Data System (ADS)

    Kriso, C.; Triozon, F.; Delerue, C.; Schneider, L.; Abbate, F.; Nolot, E.; Rideau, D.; Niquet, Y.-M.; Mugny, G.; Tavernier, C.

    2017-03-01

    The optical response of strained SiGe alloys, as well as thin Si layers, is analyzed using a sp3d5s∗ tight-binding model within the independent particle approximation. The theoretical results are compared to measurements obtained on samples with various Ge content and layer thicknesses. The dielectric function is extracted from spectroscopic ellipsometry allowing a separation of its real and imaginary parts. Theory and simulation show similar trends for the variation of the dielectric function of SiGe with varying Ge content. Variations are also well reproduced for thin Si layers with varying thickness and are attributed to quantum confinement.

  1. In Situ Infrared Ellipsometry for Protein Adsorption Studies on Ultrathin Smart Polymer Brushes in Aqueous Environment.

    PubMed

    Kroning, Annika; Furchner, Andreas; Aulich, Dennis; Bittrich, Eva; Rauch, Sebastian; Uhlmann, Petra; Eichhorn, Klaus-Jochen; Seeber, Michael; Luzinov, Igor; Kilbey, S Michael; Lokitz, Bradley S; Minko, Sergiy; Hinrichs, Karsten

    2015-06-17

    The protein-adsorbing and -repelling properties of various smart nanometer-thin polymer brushes containing poly(N-isopropylacrylamide) and poly(acrylic acid) with high potential for biosensing and biomedical applications are studied by in situ infrared-spectroscopic ellipsometry (IRSE). IRSE is a highly sensitive nondestructive technique that allows protein adsorption on polymer brushes to be investigated in an aqueous environment as external stimuli, such as temperature and pH, are varied. These changes are relevant to conditions for regulation of protein adsorption and desorption for biotechnology, biocatalysis, and bioanalytical applications. Here brushes are used as model surfaces for controlling protein adsorption of human serum albumin and human fibrinogen. The important finding of this work is that IRSE in the in situ experiments in protein solutions can distinguish between contributions of polymer brushes and proteins. The vibrational bands of the polymers provide insights into the hydration state of the brushes, whereas the protein-specific amide bands are related to changes of the protein secondary structure.

  2. The optical characterization of organometallic complex thin films by spectroscopic ellipsometry and photovoltaic diode application

    SciTech Connect

    Özaydın, C.; Güllü, Ö.; Pakma, O.; Ilhan, S.; Akkılıç, K.

    2016-05-15

    Highlights: • Optical properties and thickness of the A novel organometallic complex (OMC) film were investigated by spectroscopic ellipsometry (SE). • Au/OMC/n-Si metal/interlayer/semiconductor (MIS) diode has been fabricated • This paper presents the I–V analysis of Au/OMC/n-Si MIS diode. • Current–voltage and photovoltaic properties of the diode were investigated. - Abstract: In this work, organometallic complex (OMC) films have been deposited onto glass or silicon substrates by spin coating technique and their photovoltaic application potential has been investigated. Optical properties and thickness of the film have been investigated by spectroscopic ellipsometry (SE). Also, transmittance spectrum has been taken by UV/vis spectrophotometer. The optical method has been used to determine the band gap value of the films. Also, Au/OMC/n-Si metal/interlayer/semiconductor (MIS) diode has been fabricated. Current–voltage and photovoltaic properties of the structure were investigated. The ideality factor (n) and barrier height (Φ{sub b}) values of the diode were found to be 2.89 and 0.79 eV, respectively. The device shows photovoltaic behavior with a maximum open-circuit voltage of 396 mV and a short circuit current of 33.8 μA under 300 W light.

  3. Spectroscopic ellipsometry investigations of the optical properties of manganese doped bismuth vanadate thin films

    SciTech Connect

    Kumari, Neelam; Krupanidhi, S.B.; Varma, K.B.R.

    2010-04-15

    The optical properties of Bi{sub 2}V{sub 1-x}Mn{sub x}O{sub 5.5-x} {l_brace}x = 0.05, 0.1, 0.15 and 0.2 at.%{r_brace} thin films fabricated by pulsed laser deposition on platinized silicon substrates were studied in UV-visible spectral region (1.51-4.17 eV) using spectroscopic ellipsometry. The optical constants and thicknesses of these films have been obtained by fitting the ellipsometric data ({Psi} and {Delta}) using a multilayer four-phase model system and a relaxed Lorentz oscillator dispersion relation. The surface roughness and film thickness obtained by spectroscopic ellipsometry were found to be consistent with the results obtained by atomic force and scanning electron microscopy. The refractive index measured at 650 nm does not show any marginal increase with Mn content. Further, the extinction coefficient does not show much decrease with increasing Mn content. An increase in optical band gap energy from 2.52 to 2.77 eV with increasing Mn content from x = 0.05 to 0.15 was attributed to the increase in oxygen ion vacancy disorder.

  4. Spectroscopic imaging ellipsometry: real-time measurement of single, intact wood pulp fibers

    NASA Astrophysics Data System (ADS)

    Ye, Chun

    2006-12-01

    A nondestructive method based on spectroscopic ellipsometry has been developed and demonstrated for the real-time measurement of a single pulp fiber's microfibril angle and phase retardation, with the latter proportional to the cell wall thickness. The method uses an optical arrangement insensitive to the sample's orientation in combination with a proper spectral analysis of the sample's image. The optical arrangement and the measurement principle of the method are described. To test the new method, equipment functioning as a spectroscopic imaging ellipsometer was constructed according to the arrangement, and measurements were carried out in which single pulp fibers and ordinary wave plates were measured. The test measurements and results are described and presented.

  5. Improved gate process control at the 130-nm node using spectroscopic-ellipsometry-based profile metrology

    NASA Astrophysics Data System (ADS)

    Hodges, J. Scott; Lin, Yu-Lun C.; Burrows, Dale R.; Chiao, Ray H.; Peters, Robert M.; Rangarajan, Srinivasan; Bhatia, Kamal N.; Lakkapragada, Suresh

    2003-05-01

    The ability to control the cross-sectional profile of polysilicon gate structures on semiconductor devices is paramount to maximize product yield and transistor performance. Tighter control of gate profile parameters leads to a tighter distribution of transistor speeds, resulting in more optimized and consistent device performance. Furthermore, the ability to correlate physical in-line profile measurements taken at gate patterning process steps, to back-end-of-line device parametric test results, enables semiconductor manufacturers to minimize the cost per good die produced, by accurately screening out-of-spec product early in the process flow. The significant increase in the number of chips on today's 300mm wafers heightens the importance of obtaining reliable in-line data. In addition, the reduction of design rules to 130nm and below is driving precision requirements on metrology to <1nm, in order to maintain acceptable precision-to-tolerance (P/T) ratios. Historical methods of in-line metrology (Low Voltage Scanning Electron Microscopy, Atomic Force Microscopy, Electrical Critical Dimension Measurement) all face limitations with regards to precision, correlation, or throughput. This paper will demonstrate the use of Spectroscopic Ellipsometry to provide fast, accurate, and precise two-dimensional profile information on polysilicon gate structures. This metrology technique is currently being utilized for in-line process control and product disposition, at the gate lithography and etch process steps, on 130nm generation logic devices manufactured in Texas Instruments' DMOS 6 300mm wafer fabrication facility. A brief description of the measurement theory and gate profile measurement solution for both dense and isolated structures will be given. This will be followed by data generated from DMOS 6 production material. Using Spectroscopic Ellipsometry, precision results of <0.5nm for CD and height, and <0.25 degrees for profile sidewall angle were obtained at both the

  6. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry

    PubMed Central

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; del Río, J. Antonio; Tagüeña-Martínez, Julia

    2016-01-01

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications. PMID:27097767

  7. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry.

    PubMed

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; del Río, J Antonio; Tagüeña-Martínez, Julia

    2016-04-21

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications.

  8. In-situ spectroscopic ellipsometry study of copper selective-area atomic layer deposition on palladium

    SciTech Connect

    Jiang, Xiaoqiang; Wang, Han; Qi, Jie; Willis, Brian G.

    2014-07-01

    Selective area copper atomic layer deposition on palladium seed layers has been investigated with in-situ real-time spectroscopic ellipsometry to probe the adsorption/desorption and reaction characteristics of individual deposition cycles. The reactants are copper bis(2,2,6,6-tetramethyl-3,5-heptanedionate) vapor and hydrogen gas. Self-limiting atomic layer deposition was observed in the temperature range of 135–230 °C in a low pressure reactor. Under optimal conditions, growth occurs selectively on palladium and not on silicon dioxide or silicon nitride layers. Based on in-situ ellipsometry data and supporting experiments, a new mechanism for growth is proposed. In the proposed mechanism, precursor adsorption is reversible, and dissociatively adsorbed hydrogen are the stable surface intermediates between growth cycles. The mechanism is enabled by continuous diffusion of palladium from the seed layer into the deposited copper film and strong H* binding to palladium sites. Less intermixing can be obtained at low growth temperatures and short cycle times by minimizing Cu/Pd inter-diffusion.

  9. Role of an Oxidant Mixture as Surface Modifier of Porous Silicon Microstructures Evaluated by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Montiel-González, Zeuz; Escobar, Salvador; Nava, Rocío; Del Río, J. Antonio; Tagüeña-Martínez, Julia

    2016-04-01

    Current research on porous silicon includes the construction of complex structures with luminescent and/or photonic properties. However, their preparation with both characteristics is still challenging. Recently, our group reported a possible method to achieve that by adding an oxidant mixture to the electrolyte used to produce porous silicon. This mixture can chemically modify their microstructure by changing the thickness and surface passivation of the pore walls. In this work, we prepared a series of samples (with and without oxidant mixture) and we evaluated the structural differences through their scanning electron micrographs and their optical properties determined by spectroscopic ellipsometry. The results showed that ellipsometry is sensitive to slight variations in the porous silicon structure, caused by changes in their preparation. The fitting process, based on models constructed from the features observed in the micrographs, allowed us to see that the mayor effect of the oxidant mixture is on samples of high porosity, where the surface oxidation strongly contributes to the skeleton thinning during the electrochemical etching. This suggests the existence of a porosity threshold for the action of the oxidant mixture. These results could have a significant impact on the design of complex porous silicon structures for different optoelectronic applications.

  10. Probing initial-stages of ALD growth with dynamic in situ spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Muneshwar, Triratna; Cadien, Ken

    2015-02-01

    The initial stages of ALD surface reactions are probed using dynamic in situ spectroscopic ellipsometry (d-iSE) technique during plasma-enhanced ALD of zirconium nitride (ZrN) thin films in spectral range of 0.73-6.4 eV. The measured change in the ellipsometry parameter Δ, with every precursor (TDMAZr) and reactant (forming gas plasma) exposure is interpreted as the combined effect of film growth and change in surface chemistry during ALD. We present application of Bruggeman's effective-medium approximation (B-EMA) in the analysis of d-iSE data to determine fractional surface coverage (θ) of ALD grown film at the end of every deposition cycle. During the deposition of first few ZrN monolayers, d-iSE datasets are analyzed on the basis of surface diffusion enhanced ALD growth, where the surface adsorbed precursor molecules can diffuse over substrate surface to occupy energetically favorable surface sites. The determined surface coverage of ZrN films highlights the effects of substrate enhanced ALD growth.

  11. Optical characterization of varnish films by spectroscopic ellipsometry for application in artwork conservation.

    PubMed

    Polikreti, Kyriaki; Othonos, Andreas; Christofides, Constantinos

    2005-01-01

    The specific aim of this paper is to measure the optical constants of fresh varnish layers up to a thickness of 10 mum by spectroscopic ellipsometry. It is the first time that this technique has been used in artwork conservation and it may prove very promising due to its nondestructive character. Samples of fresh dammar varnish (natural resin) and Paraloid B72 (synthetic resin) applied on glass and carbon black acrylic paint were analyzed. Both varnishes were considered as perfect dielectrics, and the real part of their refractive index was described by the Cauchy model: n (lambda) = A + B/lambda(2) + C/lambda(4). The Cauchy coefficients for dammar varnish and Paraloid B72 were then determined for layers of known thickness. The ellipsometric data were fitted to a model, which includes a mixed varnish-air layer. The optical properties of this layer were calculated by the Bruggeman effective medium approximation. In the case of carbon black acrylic paint, another mixed layer (paint-varnish) was added to the model. The results are very close to the values given in the literature. Given the measurement reproducibility, the results show that ellipsometry can discriminate between dammar varnish and Paraloid B72. This is very important in artwork conservation studies, because it has been done by time-consuming, destructive techniques up to now. Future work includes measurements of other types of natural and synthetic varnishes, in an attempt to introduce a nondestructive method for picture varnish identification and aging studies.

  12. Mixed polarization in determining the film thickness of a silicon sphere by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Zhang, Ji-Tao; Wu, Xue-Jian; Li, Yan

    2012-01-01

    The effect of a spherical shape on the measurement result of spectroscopic ellipsometry (SE) is analyzed, and a method to eliminate this effect is proposed. Based on the simulation result of the SE measurement on a silicon sphere by ray tracking, we find that the sphere makes the parallel incident beam of the SE be divergent after reflection, and the measurement error of the SE caused by this phenomenon is explained by the mixed polarization theory. By settling an aperture in front of the detector of the SE, we can almost eliminate the error. For the silicon sphere with a diameter of 94 mm used in the Avogadro project, the thickness error of the oxide layer caused by the spherical shape can be reduced from 0.73 nm to 0.04 nm by using the proposed method. The principle of the method and the results of the experimental verification are presented.

  13. Spectroscopic ellipsometry study of Cu{sub 2}ZnSnSe{sub 4} bulk crystals

    SciTech Connect

    León, M. Lopez, N.; Merino, J. M.; Caballero, R.; Levcenko, S.; Gurieva, G.; Serna, R.; Bodnar, I. V.; Nateprov, A.; Guc, M.; Arushanov, E.; Schorr, S.; Perez-Rodriguez, A.

    2014-08-11

    Using spectroscopic ellipsometry we investigated and analyzed the pseudo-optical constants of Cu{sub 2}ZnSnSe{sub 4} bulk crystals, grown by the Bridgman method, over 0.8–4.5 eV photon energy range. The structures found in the spectra of the complex pseudodielectric functions were associated to E{sub 0}, E{sub 1A}, and E{sub 1B} interband transitions and were analyzed in frame of the Adachi's model. The interband transition parameters such as strength, threshold energy, and broadening were evaluated by using the simulated annealing algorithm. In addition, the pseudo-complex refractive index, extinction coefficient, absorption coefficient, and normal-incidence reflectivity were derived over 0.8–4.5 eV photon energy range.

  14. Study of targeted-treatment on colon cancer cell via spectroscopic imaging ellipsometry

    NASA Astrophysics Data System (ADS)

    Chen, Yu-Da; Hsu, Hao Yun; Khaleel, Mai Ibrahim; Chan, Ching-Hsiang; Chang, Yia-Chung; Wu, Chien-Hsun; Wu, Han-Chung

    2017-04-01

    We present the enhancement of targeted treatment on colon cancer cell via microscopic imaging ellipsometry (MIE). All spectroscopic MIE signals on 5μm×5μm area in visible range are captured within the modified Optrel MULTISKOP system. Colon cancer cells are cultured in Bottom-up Millicell EZ SLIDE 4-well structure under the environment (37°C, 10% CO2). Original single colon cancer cell, single colon cancer cell under untargeted-treatment, and single colon cancer cell under targeted-treatment are studied by specular-reflective mode and off-specular scattering mode in this experiment. Some polarization-related and phase-related MIE images are analyzed to reveal the improvement of targeted-treatment by observing changes in specular and off-specular reflectance and absorption.

  15. Characterization of the SEI on a carbon film electrode by combinedEQCM and spectroscopic ellipsometry

    SciTech Connect

    evans@socrates.berkeley.edu

    2002-01-01

    The electrochemical quartz crystal microbalance (EQCM) andcyclic voltammetry have been applied simultaneously to characterizeelectron-beam deposited carbon film electrodes in LiClO4 orLiPF6-containing mixed electrolytes of ethylene carbonate (EC) anddimethyl carbonate (DMC). The structure of the carbon electrode was foundto be amorphous/disordered using Raman spectroscopy. Cyclic voltammetryin LiClO4 / EC+DMC demonstrated features typical of Liintercalation/deintercalation into/from the disordered carbon electrode,and EQCM showed a corresponding mass increase/decrease. Contrary to thecase of LiClO4 / EC+DMC electrolyte, LiPF6/EC+DMC electrolyte showed noLi deintercalation out of the thin-film carbon electrode. Combined EQCMand spectroscopic ellipsometry data were compared, and the solidelectrolyte interphase density after the first cycle in LiClO4 /EC+DMCwas estimated to be 1.3 g/cm3.

  16. Modeling the transport properties of epitaxially grown thermoelectric oxide thin films using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Sarath Kumar, S. R.; Abutaha, Anas I.; Hedhili, M. N.; Alshareef, H. N.

    2012-01-01

    The influence of oxygen vacancies on the transport properties of epitaxial thermoelectric (Sr,La)TiO3 thin films is determined using electrical and spectroscopic ellipsometry (SE) measurements. Oxygen vacancy concentration was varied by ex-situ annealing in Ar and Ar/H2. All films exhibited degenerate semiconducting behavior, and electrical conductivity decreased (258-133 S cm-1) with increasing oxygen content. Similar decrease in the Seebeck coefficient is observed and attributed to a decrease in effective mass (7.8-3.2 me), as determined by SE. Excellent agreement between transport properties deduced from SE and direct electrical measurements suggests that SE is an effective tool for studying oxide thin film thermoelectrics.

  17. Growth of vacuum evaporated ultraporous silicon studied with spectroscopic ellipsometry and scanning electron microscopy

    NASA Astrophysics Data System (ADS)

    Kaminska, Kate; Amassian, Aram; Martinu, Ludvik; Robbie, Kevin

    2005-01-01

    Using a combination of variable-angle spectroscopic ellipsometry and scanning electron microscopy, we investigated the scaling behavior of uniaxially anisotropic, ultraporous silicon manufactured with glancing angle deposition. We found that both the diameter of the nanocolumns and the spacing between them increase with film thickness according to a power-law relationship consistent with self-affine fractal growth. An ellipsometric model is proposed to fit the optical properties of the anisotropic silicon films employing an effective medium approximation mixture of Tauc-Lorentz oscillator and void. This study shows that the optical response of silicon films made at glancing incidence differs significantly from that of amorphous silicon prepared by other methods due to highly oriented nanocolumn formation and power-law scaling.

  18. Structural analysis of amorphous carbon films by spectroscopic ellipsometry, RBS/ERDA, and NEXAFS

    NASA Astrophysics Data System (ADS)

    Zhou, XiaoLong; Suzuki, Tsuneo; Nakajima, Hideki; Komatsu, Keiji; Kanda, Kazuhiro; Ito, Haruhiko; Saitoh, Hidetoshi

    2017-05-01

    The structural analysis of amorphous carbon films is not only the premise of their unique properties applied in the industrial fields but also the indispensable element on their classification. In this letter, we refurbished the classification of amorphous carbon films based on the optical constants in terms of the refractive index (n) and the extinction coefficient (k). In the selected photon energy range, we defined the maximum of n (En-max) and k at a value more than 10-4 (Ek) to explore the relationship between different classification schemes for amorphous carbon films deposited by different techniques. We found that Ek and En-max of the deposited amorphous carbon films have an exponential relationship with the hydrogen contents. Thus, the spectroscopic ellipsometry analysis can also be used as one of the effective methods for the structural evaluation of the amorphous carbon films.

  19. Characterization of the Refractive Index of Strained GaInNAs Layers by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Kitatani, Takeshi; Kondow, Masahiko; Shinoda, Kazunori; Yazawa, Yoshiaki; Okai, Makoto

    1998-03-01

    We have characterized the refractive index of strained GaInNAs layers. Using spectroscopic ellipsometry (SE), the variation in optical constants of GaInNAs layers, about 6 nm thick with a nitrogen content lower than 1%, can be clearly observed. Analysis of the SE data, including the strain effect in the layer, clarified that the refractive index of GaInNAs increases in proportion to the nitrogen content. While the trend for increase in refractive index with a decrease in the bandgap energy is the same as that observed in conventional III V alloy semiconductors, the rate of increase is found to be much larger than that in GaInAs. This result suggests a large density of states in the conduction band characteristics of this type of material system that includes nitrogen atoms.

  20. Rapid, non-destructive evaluation of ultrathin WSe2 using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Eichfeld, Sarah M.; Eichfeld, Chad M.; Lin, Yu-Chuan; Hossain, Lorraine; Robinson, Joshua A.

    2014-09-01

    The utilization of tungsten diselenide (WSe2) in electronic and optoelectronic devices depends on the ability to understand and control the process-property relationship during synthesis. We demonstrate that spectroscopic ellipsometry is an excellent technique for accurate, non-destructive determination of ultra-thin (<30 nm) WSe2 properties. The refractive index (n) and extinction coefficient (k) were found to be independent of thickness down to 1.3 nm, and were used to determine film thickness, which was confirmed to be within 9% of values found via atomic force microscopy. Finally, the optical bandgap was found to closely correlate with thickness, ranging from 1.2 to 1.55 eV as the WSe2 is thinned to the equivalent of 2 atomic layers.

  1. Rapid, non-destructive evaluation of ultrathin WSe{sub 2} using spectroscopic ellipsometry

    SciTech Connect

    Eichfeld, Sarah M.; Lin, Yu-Chuan; Hossain, Lorraine; Eichfeld, Chad M.; Robinson, Joshua A.

    2014-09-01

    The utilization of tungsten diselenide (WSe{sub 2}) in electronic and optoelectronic devices depends on the ability to understand and control the process-property relationship during synthesis. We demonstrate that spectroscopic ellipsometry is an excellent technique for accurate, non-destructive determination of ultra-thin (<30 nm) WSe{sub 2} properties. The refractive index (n) and extinction coefficient (k) were found to be independent of thickness down to 1.3 nm, and were used to determine film thickness, which was confirmed to be within 9% of values found via atomic force microscopy. Finally, the optical bandgap was found to closely correlate with thickness, ranging from 1.2 to 1.55 eV as the WSe{sub 2} is thinned to the equivalent of 2 atomic layers.

  2. Determination of the optical functions of transparent glasses by using spectroscopic ellipsometry

    SciTech Connect

    Jellison, G.E. Jr.; Sales, B.C. )

    1991-10-20

    Two-channel spectroscopic polarization-modulation ellipsometry measurements have been made on four different glasses (fused SiO{sub 2}, fine-annealed BK-7, a lead-indium-phosphate glass, and a germanium-arsenic-selenium glass). We show that this technique is sensitive to thin surface layers and that these surface layers can be modeled by using the Bruggeman effective-medium theory with 50% glass and 50% voids. By correcting the experimental spectra for these surface layers, we determined the refractive index of the sample within an error of {plus minus}0.002 in the transparent region. For wavelength regions where the material is normally opaque, the ellipsometric data can be corrected for this overlayer, thereby increasing the accuracy of the determination of both the refractive index and the extinction coefficient.

  3. Spectroscopic ellipsometry for anisotropic nano-layered Al/SiO2 metamaterial with hyperbolic dispersion

    NASA Astrophysics Data System (ADS)

    Kelly, Priscilla; Martin, Andrew C.; Kuznetsova, Lyuba

    2016-09-01

    A special class of nano-layered hyperbolic metamaterials (HMMs) has received special attention recently due to their unique optical property, namely that the dispersion of the dielectric constant for HMMs exhibits a topological transition in the iso-frequency surface from an ellipsoid to a hyperboloid. Using aluminum in metal-dielectric nano-layered structures offers several advantages over currently used noble metals. The plasma frequency of the aluminum is higher than that of gold or silver. As a result, aluminum exhibits metallic characteristics over a broader spectral range than gold and silver. In addition, SiO2 is used as the dielectric for this hyperbolic metamaterial because it could be easily integrated into current CMOS technology and has near-zero losses in the UV region. In this investigation, we use generalized spectroscopic ellipsometry to study the distribution of Al within nano-layered samples fabricated using the RF sputtering technique under varying fabrication parameters with a goal of achieving hyperbolic dispersion. In our work, we developed an approach to analyzing generalized spectroscopic ellipsometry data for anisotropic Al/SiO2 structures with strong absorption, which uses the 4x4 transfer matrix approach, also known as the Berreman-formalism. This developed approach allows obtaining permittivity in all three dimensions and importing theoretical permittivity models which are tailored to the Al/SiO2 material's optical and electrical properties. In this work, we investigate the methods of reducing Al oxidation during fabrication by means of varying the fabrication temperatures and pressure by fitting data from RC2 Ellipsometer (A.C. Woollam Co.), which has dual rotating compensators. Applications for this Al/SiO2 hyperbolic metamaterial will also be discussed.

  4. Mid-infrared spectroscopic investigation

    NASA Technical Reports Server (NTRS)

    Salisbury, John W.; Vergo, Norma; Walter, Louis

    1987-01-01

    Mid-infrared spectroscopic research efforts are discussed. The development of a new instrumentation to permit advanced measurements in the mid-infrared region of the spectrum, the development of a special library of well-characterized mineral and rock specimens for interpretation of remote sensing data, and cooperative measurements of the spectral signatures of analogues of materials that may be present on the surfaces of asteroids, planets or their Moons are discussed.

  5. Study of the Dielectric Function of Graphene from Spectroscopic Ellipsometry and Electron Energy Loss Spectroscopy

    NASA Astrophysics Data System (ADS)

    Nelson, Florence

    For more than 60 years, semiconductor research has been advancing up the periodic table. The first transistor was made from germanium. This later gave way to silicon-based devices due to the latter's ability to form an excellent interface with thermally-grown oxide. Now for the last ˜8 years, the focus has moved up one more row to carbon for post-CMOS devices in order to comply with the scaling limitations of Moore's law. However, for each of these, the measurements of film properties and dimensions have always been required for technological applications. These measurement methods often incorporate the use of light or electrons in order to take advantage of a wavelength that is on the order of, or smaller than, the feature sizes of interest. This thesis compares the dielectric function of graphene measured by an optical method to that obtained from an electron energy loss method in order to observe the effect of contamination and substrate on the optical properties of graphene exposed to the environment. Whether viewed in terms of how light affects a material (dielectric function) or how a material affects light (refractive index), the optical response is a quantity that may be used to obtain information about a film's thickness, energy structure, and the types of excitations that are responsible for energy loss. The three main experimental methods used in this thesis work are spectroscopic ellipsometry (SE), scanning transmission electron microscopy (STEM), and electron energy loss spectroscopy (EELS). SE is commonly used in clean-room environments for optical measurement over the energy range of ˜0-5 eV. This method is used to study graphene's dielectric function from the ultraviolet (UV) through infrared (IR) regions through use of an oscillator dispersion model. A nearly constant absorbance over the IR and into the visible region is observed due to vertical transitions between graphene's linearly dispersed pi-bands at the Dirac points. An exciton

  6. Absorption properties of type-II InAs/InAsSb superlattices measured by spectroscopic ellipsometry

    SciTech Connect

    Webster, P. T.; Riordan, N. A.; Liu, S.; Zhang, Y.-H.; Johnson, S. R.; Steenbergen, E. H.

    2015-02-09

    Strain-balanced InAs/InAsSb superlattices offer access to the mid- to long-wavelength infrared region with what is essentially a ternary material system at the GaSb lattice constant. The absorption coefficients of InAs/InAsSb superlattices grown by molecular beam epitaxy on (100)-oriented GaSb substrates are measured at room temperature over the 30 to 800 meV photon energy range using spectroscopic ellipsometry, and the miniband structure of each superlattice is calculated using a Kronig-Penney model. The InAs/InAsSb conduction band offset is used as a fitting parameter to align the calculated superlattice ground state transition energy to the measured absorption onset at room temperature and to the photoluminescence peak energy at low temperature. It is observed that the ground state absorption coefficient and transition strength are proportional to the square of the wavefunction overlap and the ground state absorption coefficient approaches a maximum value of around 5780 cm{sup −1} as the wavefunction overlap approaches 100%. The absorption analysis of these samples indicates that the optical joint density of states is weakly dependent on the period thickness and Sb content of the superlattice, and that wavefunction overlap is the principal design parameter in terms of obtaining strong absorption in these structures.

  7. Plasmonic properties of implanted Ag nanoparticles in SiO2 thin layer by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Battie, Yann; En Naciri, Aotmane; Chaoui, Nouari; Le Gall, Yann; Muller, Dominique; Carrada, Marzia; Mathiot, Daniel

    2017-08-01

    We report an uncommon study of the insertion of distributions of both volume fraction and depolarization factors in the modeling of the plasmonic properties of implanted Ag nanoparticles (Ag-NPs) in a SiO2 layer when using spectroscopic ellipsometry (SE) characterization. The Ag-NPs were embedded in the SiO2 matrix by Ag+ ion implantation at various doses of 0.5 × 1016, 1 × 1016, 2 × 1016, and 5 × 1016 ions cm-2. The formation of the Ag-NPs in a host matrix of SiO2 was controlled by transmission electron microscopy (TEM). The Ag-NPs are self-organized in the layer, and their mean radius ranges between 2 and 20 nm. The optical properties of layers were extracted by modeling the SE parameters by taking into account the depth profile concentration of Ag-NPs. The mixture of SiO2 and Ag-NP inclusions was modeled as an effective medium according to the shape distributed effective medium theory (SDEMT). In addition to the optical responses, it is shown that this model enables the explanation of the impact of NP shape distribution on the plasmon band and provides precious information about the NP shape characteristics. A good agreement was obtained between ellipsometry and TEM results. The distribution of the volume fraction in the film was found to lead to a gradient of effective dielectric function which was determined by the SDEMT model. The effective dielectric function reveals distinct Ag plasmon resonance varying as the Ag+ ions dose is varied. The real part of the dielectric function shows a significant variation around the plasmon resonance in accordance with the Kramers-Kronig equations. All determined optical parameters by SDEMT are provided and discussed. We highlight that SE combined with SDEMT calculations can be considered as a reliable tool for the determination of the NP shape and volume fraction distributions without the need of TEM.

  8. Combined atomic force microscopy and spectroscopic ellipsometry applied to the analysis of lipid-protein thin films.

    PubMed

    Finot, Eric; Markey, Laurent; Hane, Francis; Amrein, Mathias; Leonenko, Zoya

    2013-04-01

    Pulmonary surfactant is a complex mixture of phospholipids and proteins and forms a thin film at the lung alveolar interface separating air from liquid environment. The film reduces the work of breathing during repeatable compressions of the alveoli which form a characteristic multilayer upon compression. In this work, we investigated the structure of bovine lipid extract surfactant (BLES). We analysed the BLES films by atomic force microscopy (AFM) and spectroscopic ellipsometry (SE) in order to provide combined characterization of both morphology and thickness of surfactant films. We show how the spectroscopic ellipsometry can be used to supplement the data obtained by AFM. We demonstrate that indium tin oxide (ITO) substrate used for spectroscopic ellipsometry is preferable over glass substrate to enhance the optical contrast. An optical model was proposed to account for non-uniform film morphology. We obtained good correlations between the multilayer surface coverage, determined by both AFM and SE. SE measures the thickness of the first uniform monolayer as 2.6 nm that cannot be achieved by AFM imaging alone.

  9. Silicon fin line edge roughness determination and sensitivity analysis by Mueller matrix spectroscopic ellipsometry based scatterometry

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya; O'Mullane, Samuel; Sunkoju, Sravan; Hosler, Erik R.; Kamineni, Vimal; Preil, Moshe; Keller, Nick; Race, Joseph; Muthinti, Gangadhara Raja; Diebold, Alain C.

    2015-03-01

    Measurement and control of line edge roughness (LER) is one of the most challenging issues facing patterning technology. As the critical dimensions (CD) of patterned structures decrease, LER of only a few nanometers can negatively impact device performance. Here, Mueller matrix spectroscopic ellipsometry (MMSE) based scatterometry is used to determine LER in periodic line-space structures in 28 nm pitch Si fin samples fabricated by directed selfassembly (DSA) patterning. The optical response of the Mueller matrix (MM) elements is influenced by structural parameters like pitch, CD, height, and side-wall angle (SWA), as well as the optical properties of the materials. Evaluation and decoupling MM element response to LER from other structural parameters requires sensitivity analysis using simulations of optical models that include LER. Here, an approach is developed that quantifies Si fin LER by comparing the optical responses generated by systematically varying the grating shape and measurement conditions. Finally, the validity of this approach is established by comparing the results obtained from top down scanning electron microscope (SEM) images and cross-sectional TEM image of the 28 nm pitch Si fins.

  10. B-spline parametrization of the dielectric function applied to spectroscopic ellipsometry on amorphous carbon

    SciTech Connect

    Weber, J. W.; Hansen, T. A. R.; Sanden, M. C. M. van de; Engeln, R.

    2009-12-15

    The remote plasma deposition of hydrogenated amorphous carbon (a-C:H) thin films is investigated by in situ spectroscopic ellipsometry (SE). The dielectric function of the a-C:H film is in this paper parametrized by means of B-splines. In contrast with the commonly used Tauc-Lorentz oscillator, B-splines are a purely mathematical description of the dielectric function. We will show that the B-spline parametrization, which requires no prior knowledge about the film or its interaction with light, is a fast and simple-to-apply method that accurately determines thickness, surface roughness, and the dielectric constants of hydrogenated amorphous carbon thin films. Analysis of the deposition process provides us with information about the high deposition rate, the nucleation stage, and the homogeneity in depth of the deposited film. Finally, we show that the B-spline parametrization can serve as a stepping stone to physics-based models, such as the Tauc-Lorentz oscillator.

  11. Characterization of SiGe/Ge heterostructures and graded layers using variable angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Croke, E. T.; Wang, K. L.; Heyd, A. R.; Alterovitz, S. A.; Lee, C. H.

    1996-01-01

    Variable angle spectroscopic ellipsometry (VASE) has been used to characterize Si(x)Ge(1-x)/Ge superlattices (SLs) grown on Ge substrates and thick Si(x)Ge(1-x)/Ge heterostructures grown on Si substrates. Our VASE analysis yielded the thicknesses and alloy compositions of all layers within the optical penetration depth of the surface. In addition, strain effects were observed in the VASE results for layers under both compressive and tensile strain. Results for the SL structures were found to be in close agreement with high resolution x-ray diffraction measurements made on the same samples. The VASE analysis has been upgraded to characterize linearly graded Si(x)Ge(1-x) buffer layers. The algorithm has been used to determine the total thickness of the buffer layer along with the start and end alloy composition by breaking the total thickness into many (typically more than 20) equal layers. Our ellipsometric results for 1 (mu)m buffer layers graded in the ranges 0.7 less than or = x less than or = 1.0, and 0.5 less than or = x less than or = 1.0 are presented, and compare favorably with the nominal values.

  12. Characterization of High Ge Content SiGe Heterostructures and Graded Alloy Layers Using Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    Heyd, A. R.; Alterovitz, S. A.; Croke, E. T.

    1995-01-01

    Si(x)Ge(1-x)heterostructures on Si substrates have been widely studied due to the maturity of Si technology. However, work on Si(x)Ge)1-x) heterostructures on Ge substrates has not received much attention. A Si(x)Ge(1-x) layer on a Si substrate is under compressive strain while Si(x)Ge(1-x) on Ge is under tensile strain; thus the critical points will behave differently. In order to accurately characterize high Ge content Si(x)Ge(1-x) layers the energy shift algorithm used to calculate alloy compositions, has been modified. These results have been used along with variable angle spectroscopic ellipsometry (VASE) measurements to characterize Si(x)Ge(1-x)/Ge superlattices grown on Ge substrates. The results agree closely with high resolution x-ray diffraction measurements made on the same samples. The modified energy shift algorithm also allows the VASE analysis to be upgraded in order to characterize linearly graded layers. In this work VASE has been used to characterize graded Si(x)Ge(1-x) layers in terms of the total thickness, and the start and end alloy composition. Results are presented for a 1 micrometer Si(x)Ge(1-x) layer linearly graded in the range 0.5 less than or equal to x less than or equal to 1.0.

  13. Optical model for spectroscopic ellipsometry analysis of plasma-induced damage to SiOC films

    NASA Astrophysics Data System (ADS)

    Nishida, Kentaro; Ono, Kouichi; Eriguchi, Koji

    2017-06-01

    We propose a new optical model for assigning the physical structure of plasma-damaged SiOC films examined by spectroscopic ellipsometry. A two-parameter Bruggeman’s effective medium approximation is used for estimating the thickness and volume fraction of a low-dielectric (ɛ) region (ɛ ˜ 1) in the SiO2 background. We introduced an optical model consisting of damaged and undamaged layers. The thickness and fraction of the damaged layer are fitted. Prediction was performed using this model for SiOC samples exposed to various plasmas, and the results were compared with those of scanning electron microscopy. We further applied this model to estimating the depth of damaged region in combination with a layer-by-layer wet-etching technique. In the case of He plasma exposure, the structural change induced by the damage extends 90-130 nm in depth. Since the degradation of interlayer dielectrics affects the circuit performance, the proposed optical model should be used for designing plasma processes.

  14. In situ spectroscopic ellipsometry during electrochemical treatment of zinc in alkaline carbonate electrolyte

    NASA Astrophysics Data System (ADS)

    Chen, Ying; Erbe, Andreas

    2013-01-01

    In situ spectroscopic ellipsometry (SE, 297-820 nm, 4.4-1.5 eV) during electrochemical oxidation/reduction of zinc in alkaline carbonate electrolyte was performed using a specially designed optical-electrochemical cell. The growth and shrinkage of the interfacial layer on Zn was analysed on the basis of Lekner's first order perturbation theory. For non-absorbing thin films on metal surfaces, an algorithm has been derived to extract the thickness of a surface film directly from ellipsometric data without the need of optical modelling. During cyclic voltammetry (CV), a rapid decrease/increase in the layer thickness in the reduction/oxidation peak has been found. In the potential regime where the surface is oxide-covered, the layer thickness increases/decreases linearly with potential in anodic/cathodic scans. The density of the interfacial region in this regime is constant. During chronoamperometric experiments, a fast correlating jump in thickness was found after potential jumps. An ageing of the films is observed in the absorption spectrum (from the ellipsometric parameter Ψ), which shows changes until ≈ 30 min after potential jumps. Analysis of the current transients points to continuous dissolution of Zn.

  15. Spectroscopic ellipsometry as a process control tool for manufacturing cadmium telluride thin film photovoltaic devices

    NASA Astrophysics Data System (ADS)

    Smith, Westcott P.

    In recent decades, there has been concern regarding the sustainability of fossil fuels. One of the more promising alternatives is Cadmium Telluride (CdTe) thin-film photovoltaic (PV) devices. Improved quality measurement techniques may aid in improving this existing technology. Spectroscopic ellipsometry (SE) is a common, non-destructive technique for measuring thin films in the silicon wafer industry. SE results have also been tied to properties believed to play a role in CdTe PV device efficiency. A study assessing the potential of SE for use as a quality measurement tool had not been previously reported. Samples of CdTe devices produced by both laboratory and industrial scale processes were measured by SE and Scanning Electron Microscopy (SEM). Mathematical models of the optical characteristics of the devices were developed and fit to SE data from multiple angles and locations on each sample. Basic statistical analysis was performed on results from the automated fits to provide an initial evaluation of SE as a quantitative quality measurement process. In all cases studied, automated SE models produced average stack thickness values within 10% of the values produced by SEM, and standard deviations for the top bulk layer thickness were less than 1% of the average values.

  16. Optical properties of a nanostructured glass-based film using spectroscopic ellipsometry

    DOE PAGES

    Jellison, G. E.; Aytug, T.; Lupini, A. R.; ...

    2015-12-22

    Nanostructured glass films, which are fabricated using spinodally phase-separated low-alkali glasses, have several interesting and useful characteristics, including being robust, non-wetting and antireflective. Spectroscopic ellipsometry measurements have been performed on one such film and its optical properties were analyzed using a 5-layer structural model of the near-surface region. Since the glass and the film are transparent over the spectral region of the measurement, the Sellmeier model is used to parameterize the dispersion in the refractive index. To simulate the variation of the optical properties of the film over the spot size of the ellipsometer (~ 3 × 5 mm), themore » Sellmeier amplitude is convoluted using a Gaussian distribution. The transition layers between the ambient and the film and between the film and the substrate are modeled as graded layers, where the refractive index varies as a function of depth. These layers are modeled using a two-component Bruggeman effective medium approximation where the two components are the layer above and the layer below. Lastly, the fraction is continuous through the transition layer and is modelled using the incomplete beta function.« less

  17. Optical properties of a nanostructured glass-based film using spectroscopic ellipsometry

    SciTech Connect

    Jellison, G. E.; Aytug, T.; Lupini, A. R.; Paranthaman, M. P.; Joshi, Pooran C.

    2015-12-22

    Nanostructured glass films, which are fabricated using spinodally phase-separated low-alkali glasses, have several interesting and useful characteristics, including being robust, non-wetting and antireflective. Spectroscopic ellipsometry measurements have been performed on one such film and its optical properties were analyzed using a 5-layer structural model of the near-surface region. Since the glass and the film are transparent over the spectral region of the measurement, the Sellmeier model is used to parameterize the dispersion in the refractive index. To simulate the variation of the optical properties of the film over the spot size of the ellipsometer (~ 3 × 5 mm), the Sellmeier amplitude is convoluted using a Gaussian distribution. The transition layers between the ambient and the film and between the film and the substrate are modeled as graded layers, where the refractive index varies as a function of depth. These layers are modeled using a two-component Bruggeman effective medium approximation where the two components are the layer above and the layer below. Lastly, the fraction is continuous through the transition layer and is modelled using the incomplete beta function.

  18. New method for determination of the photoresist Dill parameters using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.

    1999-04-01

    In this paper a new method to determine photoresist Dill parameters is presented. Based on spectroscopic ellipsometry (SE) measurements, this new method is more precise than standard techniques based on transmittance measurements. Indeed, compared to photometry, SE technique is a self calibrated technique which provide directly two independent parameters Tan (Psi) and Cos (Delta) which can be used to extract directly thickness but also optical indices of a layer inside a multilayer structure. Moreover, the wavelength dependence introduces more restrictions for the data analysis since thickness and optical indices can be deduced directly in many cases. We apply this technique to different kinds of photoresist designed for 365nm and 248nm. At each wavelength ellipsometric parameters are simulated directly versus the exposure dose without any assumption on the thickness and on the index of refraction evolution. On 365nm photoresist this new method provides Dill parameters in good agreement with the standard method. On 248nm photoresist we show that the influence of the exposure is more important on the refractive index and on the thickness of the layer than on its absorption.

  19. New method for determination of the photoresist Dill parameters using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Boher, Pierre; Defranoux, Christophe; Piel, Jean-Philippe; Stehle, Jean-Louis P.

    1999-06-01

    In this paper a new method to determine photoresist DIll parameters is presented. Based on spectroscopic ellipsometry (SE) measurements, this new method is more precise than standard techniques based on transmittance measurements. Indeed, compared to photometry, SE technique is a self calibrated technique which provide directly two independent parameters Tan (Psi) and Cos (Delta) which can be used to extract directly thickness but also optical indices of a layer inside a multilayer structure. Moreover, the wavelength dependence introduces more restrictions for the data analysis since thickness and optical indices can be deduced directly in many cases. We apply this technique to different kinds of photoresist designed for 365nm and 248nm. At each wavelength ellipsometric parameters are simulate directly versus the exposure dose without any assumption on the thickness and on the index of refraction evolution. On 365nm photoresist this new method provides Dill parameters in good agreement with the standard method. On 248nm photoresist we show that the influence of the exposure is more important on the refractive index and on the thickness of the layer than on its absorption.

  20. Spectroscopic ellipsometry study of N+ ion-implanted ethylene-norbornene films

    NASA Astrophysics Data System (ADS)

    Šiljegović, M.; Kačarević-Popović, Z. M.; Stchakovsky, M.; Radosavljević, A. N.; Korica, S.; Novaković, M.; Popović, M.

    2014-05-01

    The optical properties of 150 keV N+ implanted ethylene-norbornene (TOPAS 6017S-04) copolymer were investigated using phase modulated spectroscopic ellipsometry (PMSE) and ultraviolet-visible (UV-Vis) spectroscopy in the ranges of 0.6-6.5 eV and of 1.5-6.2 eV, respectively. The single-effective-oscillator model was used to fit the calculated data to the experimental ellipsometric spectra. The results show that the oscillator and dispersion energies decrease with increasing ion fluence up to 1015 cm-2, and then these parameters increase with further fluence increasing. Analysis of the UV-Vis absorption spectra revealed the presence of indirect electronic transitions with the band gap energy in the range of 1.3 to 2.8 eV. It was found that both the band gap energy and the energy width of the distribution of localized band tail states decrease, while the values of Tauc coefficient increase with increasing the ion fluence. From the ellipsometric data we found that the real part of the dielectric function increased about 7% after irradiation with 1015 cm-2, and decreased about 10% in samples modified with 1016 cm-2.

  1. Vanadium oxide-carbon nanotube composite films characterized by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    He, Qiong; Xu, Xiangdong; Gu, Yu; Wang, Meng; Yao, Jie; Jiang, Yadong; Sun, Minghui; Ao, Tianhong; Lian, Yuxiang; Wang, Fu; Li, Xinrong

    2016-10-01

    Spectroscopic ellipsometry (SE) is utilized to characterize the vanadium oxide (VO x )-single walled carbon nanotube (SWCNT) composite films prepared by sol-gel. Five Tauc-Lorentz oscillators model is employed to describe the dispersions in the optical responses of VO x and VO x -SWCNT thin films. Results reveal that if the SWCNT concentration in the composite film is increased, the refractive index is decreased, while the extinction coefficient is increased. Moreover, higher SWCNT content leads to lower optical band gap (E g) but larger localized state (E e). Interestingly, both E g and E e values reach saturated at a SWCNT content of ~8 wt%. Particularly, the peak transition energies of the 5 Tauc-Lorentz oscillators have been assigned to the specific transitions according to the band structures of VO x . This work reveals the feasibility of investigating the optical properties and microstructures of VO x -SWCNT composite films by SE. These experimental results will be helpful for better understanding the VO x -SWCNT composite films, and promoting future characterizations of other SWCNT-based composites by SE.

  2. In situ optical characterizations of the annealing effects upon SnO2:F films by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Yuan, Guangzhong; Wang, Kangkai; Li, Ming; Gao, Qian; Liu, Yong; Jia, Shaohui; Song, Chenlu; Han, Gaorong

    2016-10-01

    In situ study of the annealing effects, up to 600 °C, upon the optical performance of SnO2:F films have been successfully conducted with spectroscopic ellipsometry. The thickness and optical parameters were obtained by the regression of the measured ellipsometry parameters using a five-layer model. The results show that the re-densification of the SnO2:F layers occurs at above 200 °C, resulting in an irreversible thickness reducing from about 326 nm to about 321 nm. The refractive index of the SnO2:F layer increases with temperature and decreases in the cooling period. The in situ temperature dependence of the average refractive index has a good agreement with the sheet resistance measurement results, not only verifying the annealing process deteriorates the low-emissivity performance, but also demonstrates that spectroscopic ellipsometry method is a suitable optical characterization technique to adjust the on-line coating process of float glass.

  3. Spectroscopic ellipsometry and polarimetry for materials and systems analysis at the nanometer scale: state-of-the-art, potential, and perspectives

    PubMed Central

    Bergmair, Michael; Bruno, Giovanni; Cattelan, Denis; Cobet, Christoph; de Martino, Antonello; Fleischer, Karsten; Dohcevic-Mitrovic, Zorana; Esser, Norbert; Galliet, Melanie; Gajic, Rados; Hemzal, Dušan; Hingerl, Kurt; Humlicek, Josef; Ossikovski, Razvigor; Popovic, Zoran V.; Saxl, Ottilia

    2009-01-01

    This paper discusses the fundamentals, applications, potential, limitations, and future perspectives of polarized light reflection techniques for the characterization of materials and related systems and devices at the nanoscale. These techniques include spectroscopic ellipsometry, polarimetry, and reflectance anisotropy. We give an overview of the various ellipsometry strategies for the measurement and analysis of nanometric films, metal nanoparticles and nanowires, semiconductor nanocrystals, and submicron periodic structures. We show that ellipsometry is capable of more than the determination of thickness and optical properties, and it can be exploited to gain information about process control, geometry factors, anisotropy, defects, and quantum confinement effects of nanostructures. PMID:21170135

  4. Corrosion under argon irradiation of titanium in the low MeV range: A study coupling AFM and Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Do, Ngoc-Long; Garcia-Caurel, Enric; Bérerd, Nicolas; Moncoffre, Nathalie; Gorse-Pomonti, Dominique

    2014-05-01

    This paper reports on a recent study of the corrosion under argon ion irradiation of titanium in the low MeV range (1-9 MeV), associating AFM and Spectroscopic Ellipsometry. Irradiation with MeV Arn+ (n = 1, 3) ions produces damages on the titanium surface. Large craters form on the oxidized titanium surface whose characteristics vary as a function of the argon energy between 2 and 9 MeV. The superficial oxide grows thicker under irradiation over the same energy range, especially near 3 MeV. It is suggested that collisions cascades play a significant role in the overall damage process.

  5. Thin-film coalescence in hydrogenated amorphous silicon probed by spectroscopic ellipsometry with millisecond-scale resolution

    NASA Astrophysics Data System (ADS)

    Li, Y.-M.; An, Ilsin; Nguyen, H. V.; Wronski, C. R.; Collins, R. W.

    1992-05-01

    New developments in spectroscopic ellipsometry (1.5<=hν<=4.3 eV) now provide quantitative information on thin films with a time resolution of 16 ms. We report submonolayer sensitivity to a surface smoothening effect associated with nuclei coalescence in the early stages of hydrogenated amorphous silicon (a-Si:H) preparation by plasma-enhanced chemical vapor deposition. An investigation of a-Si:H prepared on c-Si and Cr substrates under different conditions of substrate temperature and plasma power discloses a clear correlation between the magnitude of this effect and the ultimate bulk properties of the material.

  6. Analysis and optimization of thin film photovoltaic materials and device fabrication by real time spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Li, Jian; Stoke, Jason A.; Podraza, Nikolas J.; Sainju, Deepak; Parikh, Anuja; Cao, Xinmin; Khatri, Himal; Barreau, Nicolas; Marsillac, Sylvain; Deng, Xunming; Collins, Robert W.

    2007-09-01

    Methods of spectroscopic ellipsometry (SE) have been applied to investigate the growth and properties of the material components used in the three major thin film photovoltaics technologies: (1) hydrogenated silicon (Si:H); (2) cadmium telluride (CdTe); and (3) copper indium-gallium diselenide (CuIn 1-xGa xSe2 or CIGS). In Si:H technology, real time SE (RTSE) has been applied to establish deposition phase diagrams that describe very high frequency (vhf) plasmaenhanced chemical vapor deposition (PECVD) processes for hydrogenated silicon (Si:H) and silicon-germanium alloy (Si 1-xGe x:H) thin films. This study has reaffirmed that the highest efficiencies for a-Si:H and a-Si 1-xGe x:H component solar cells of multijunction devices are obtained when the i-layers are prepared under maximal H II dilution conditions. In CdTe technology, the magnetron sputter deposition of polycrystalline CdTe, CdS, and CdTe 1-xS x thin films as well as the formation of CdS/CdTe and CdTe/CdS heterojunctions has been studied. The nucleation and growth behaviors of CdTe and CdS show strong variations with deposition temperature, and this influences the ultimate grain size. The dielectric functions ɛ of the CdTe 1-xS x alloys have been deduced in order to set up a database for real time investigation of inter-diffusion at the CdS/CdTe and CdTe/CdS interfaces. In CIGS technology, strong variations in ɛ of the Mo back contact during sputter deposition have been observed, and these results have been understood applying a Drude relaxation time that varies with the Mo film thickness. Ex-situ SE measurements of a novel In IIS 3 window layer have shown critical point structures at 2.77+/-0.08 eV, 4.92+/-0.005 eV, and 5.64+/-0.005 eV, as well as an absorption tail with an onset near 1.9 eV. Simulations of solar cell performance comparing In IIS 3 and the conventional CdS have revealed similar quantum efficiencies, suggesting the possibility of a Cd-free window layer in CIGS technology.

  7. The Characterization of GaAs/AlGaAs Heterostructures by Variable Angle Spectroscopic Ellipsometry

    DTIC Science & Technology

    1988-08-01

    58 E. Direct Interband Transitions in Semiconductors 68 F. MODFET and Multiple Quantum Well Energy Bands... semiconductor growth processes. Variable angle of incidence spectro- scopic ellipsometry (VASE) provides an accurate and nondestructive method of characterizing...both simple and complex multilayered semiconductor structures (2). Par- ticularly, VASE is applicable as a diagnostic tool for studying: the layer

  8. Optical Metrology for Directed Self-assembly Patterning Using Mueller Matrix Spectroscopic Ellipsometry Based Scatterometry

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya J.

    The semiconductor industry continues to drive patterning solutions that enable devices with higher memory storage capacity, faster computing performance, lower cost per transistors, and higher transistor density. These developments in the field of semiconductor manufacturing along with the overall minimization of the size of transistors require cutting-edge metrology tools for characterization. Directed self-assembly (DSA) patterning process can be used to fabricate nanoscale line-space patterns and contact holes via thermodynamically driven micro-phase separation of block copolymer (BCP) films with boundary constraints from guiding templates. Its main advantages are high pattern resolution (~10 nm), high throughput, no requirement of a high-resolution mask, and compatibility with standard fab-equipment and processes. Although research into DSA patterning has demonstrated a high potential as a nanoscale patterning process, there are critical challenges that must be overcome before transferring DSA into high volume manufacturing, including achievement of low defect density and high process stability. For this, advances in critical dimension (CD) and overlay measurement as well as rapid defect characterization are required. Both scatterometry and critical dimension-scanning electron microscopy (CD-SEM) are routinely used for inline dimensional metrology. CD-SEM inspection is limited, as it does not easily provide detailed line-shape information, whereas scatterometry has the capability of measuring important feature dimensions including: line-width, line-shape, sidewall-angle, and thickness of the patterned samples quickly and non-destructively. The present work describes the application of Mueller matrix spectroscopic ellipsometry (MMSE) based scatterometry to optically characterize DSA patterned line- space grating and contact hole structures fabricated with phase-separated polystyrene-b-polymethylmethacrylate (PS-b-PMMA) at various integration steps of BCP DSA

  9. Real time spectroscopic ellipsometry of the growth and phase evolution of thin film silicon-germanium:hydrogen

    NASA Astrophysics Data System (ADS)

    Podraza, Nikolas J.

    Spectroscopic ellipsometry (SE) is one of the most important characterization techniques available for accurately and precisely measuring thin films including their structural parameters such as thickness and their optical properties such as the index of refraction and extinction coefficient. The importance of SE derives from the fact that it can provide useful physical and optical characteristics of thin films and how they vary in the fabrication process. These characteristics serve as key inputs for optical modeling of complex structures in order to better understand and predict the performance of multilayer devices. In this thesis, the growth of hydrogenated silicon (Si:H) and silicon germanium alloy (Si1-xGex:H) thin films by plasma enhanced chemical vapor deposition (PECVD) has been studied by real time spectroscopic ellipsometry (RTSE). The motivation is to develop deposition phase diagrams that can provide greater insights into the optimization of amorphous silicon germanium alloys (a-Si1-xGex:H) for multijunction photovoltaics. Real time spectroscopic ellipsometry (RTSE), performed both in situ and in real time, was applied to deduce the microstructural evolution and phase diagrams of Si1-xGex:H thin films suitable for the middle and bottom intrinsic layers of triple junction photovoltaic devices. These thin film depositions were performed under several different deposition conditions involving variations in hydrogen dilution ratio (which generally forms the abscissa of the deposition phase diagram), germane flow ratio, substrate temperature, electrode configuration, and helium dilution ratio. These phase diagrams depict the bulk layer thicknesses at which structural and phase transitions occur as functions of hydrogen dilution ratio, germane flow ratio, or substrate temperature. These transitions include the amorphous-to-amorphous roughening transition [a → a], the amorphous-to-(mixed-phase amorphous-plus-microcrystalline) phase transition [a → (a

  10. Spectroscopic Ellipsometry and Fluorescence Study of Thermochromism in an Ultrathin Poly(diacetylene) Film: Reversibility and Transition Kinetics

    SciTech Connect

    CARPICK,R.W.; MAYER,THOMAS M.; SASAKI,DARRYL Y.; BURNS,ALAN R.

    2000-01-18

    We have investigated the thermochromic transition of an ultrathin poly(diacetylene) film. The Langmuir film is composed of three layers of polymerized 10,12-pentacosadiynoic acid [CH{sub 3}(CH{sub 2}){sub 11}C{triple_bond}CC{triple_bond}C(CH{sub 2}){sub 8}COOH] (poly-PCDA) organized into crystalline domains on a silicon substrate. Spectroscopic ellipsometry and fluorescence intensity measurements are obtained with in-situ temperature control. Poly-PCDA films exhibit a reversible thermal transition between the initial blue form and an intermediate ''purple'' form that exists only at elevated temperature (between 303-333 K), followed by an irreversible transition to the red form after annealing above 320 K. We propose that the purple form is thermally distorted blue poly-PCDA, and may represent a transitional configuration in the irreversible conversion to red. This hypothesis is supported by the appearance of unique features in the absorption spectra for each form as derived from the ellipsometry measurements. Significant fluorescence emission occurs only with the red form, and is reduced at elevated temperatures while the absorption remains unchanged. Reduced emission is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence measurements of the irreversible transition have been performed. Using a first-order kinetic analysis of these measurements we deduce an energy barrier of 17.6 {+-} 1.1 kcal mol{sup -1} between the blue and red forms.

  11. In situ real-time spectroscopic ellipsometry measurement for the investigation of molecular orientation in organic amorphous multilayer structures

    NASA Astrophysics Data System (ADS)

    Yokoyama, Daisuke; Adachi, Chihaya

    2010-06-01

    To investigate molecular orientation in organic amorphous films, in situ real-time spectroscopic ellipsometry measurements were performed during vacuum deposition. Three materials with different molecular shapes were adopted to confirm the generality of the molecular orientation. In all three cases, more than 200 000 values for the ellipsometric parameters measured during deposition were well simulated simultaneously over the entire spectral range and measurement period using a simple model where the films possessed homogeneous optical anisotropy. This demonstrated the homogeneity of the molecular orientation in the direction of film thickness. The molecular orientation can be controlled by the substrate temperature even in multilayer structures. It is also demonstrated that a "multilayer structure" can be fabricated using only one material, where each layer has different optical and electrical properties.

  12. Temperature dependence of the electronic transitions in BiFeO{sub 3} thin film studied by spectroscopic ellipsometry

    SciTech Connect

    Kang, T. D.; Jeon, B. C.; Moon, S. J.

    2015-04-07

    The temperature dependence of the electronic response of BiFeO{sub 3} thin film grown on a SrTiO{sub 3} substrate is investigated using spectroscopic ellipsometry. By analyzing the pseudodielectric function, we identify two d-d crystal field transitions of Fe{sup 3+} ions in the energy region between 1 and 2 eV. The d-d transitions show abnormal temperature dependence that cannot be attributed to conventional electron-phonon interactions. The origin of the abnormal temperature dependence is discussed in terms of spin-charge coupling. The temperature dependence of the charge transfer transitions located above 2.5 eV is characterized by standard critical point model analysis of the 2nd derivatives of the dielectric function. This analysis provides detailed information of the critical point parameters for charge transfer transitions.

  13. Investigation of temperature dependent dielectric constant of a sputtered TiN thin film by spectroscopic ellipsometry

    SciTech Connect

    Tripura Sundari, S. Ramaseshan, R.; Jose, Feby; Dash, S.; Tyagi, A. K.

    2014-01-21

    The temperature dependence of optical constants of titanium nitride thin film is investigated using Spectroscopic Ellipsometry (SE) between 1.4 and 5 eV in the temperature range of 300 K to 650 K in steps of 50 K. The real and imaginary parts of the dielectric functions ε{sub 1}(E) and ε{sub 2}(E) marginally increase with increase in temperature. A Drude Lorentz dielectric analysis based on free electron and oscillator model are carried out to describe the temperature behavior. With increase in temperature, the unscreened plasma frequency and broadening marginally decreased and increased, respectively. The parameters of the Lorentz oscillator model also showed that the relaxation time decreased with temperature while the oscillator energies increased. This study shows that owing to the marginal change in the refractive index with temperature, titanium nitride can be employed for surface plasmon sensor applications even in environments where rise in temperature is imminent.

  14. Atomic oxygen effects on thin film space coatings studied by spectroscopic ellipsometry, atomic force microscopy, and laser light scattering

    NASA Technical Reports Server (NTRS)

    Synowicki, R. A.; Hale, Jeffrey S.; Woollam, John A.

    1992-01-01

    The University of Nebraska is currently evaluating Low Earth Orbit (LEO) simulation techniques as well as a variety of thin film protective coatings to withstand atomic oxygen (AO) degradation. Both oxygen plasma ashers and an electron cyclotron resonance (ECR) source are being used for LEO simulation. Thin film coatings are characterized by optical techniques including Variable Angle Spectroscopic Ellipsometry, Optical spectrophotometry, and laser light scatterometry. Atomic Force Microscopy (AFM) is also used to characterize surface morphology. Results on diamondlike carbon (DLC) films show that DLC degrades with simulated AO exposure at a rate comparable to Kapton polyimide. Since DLC is not as susceptible to environmental factors such as moisture absorption, it could potentially provide more accurate measurements of AO fluence on short space flights.

  15. Nucleation and growth of MgO atomic layer deposition: A real-time spectroscopic ellipsometry study

    SciTech Connect

    Wang, Han; Fu, Kan

    2013-11-15

    The atomic layer deposition (ALD) of MgO thin films from bis(cyclopentadienyl) magnesium and H{sub 2}O was studied using in-situ real-time spectroscopic ellipsometry (SE), ex-situ x-ray photoelectron spectroscopy, and grazing-incidence x-ray diffraction. It is found that the initial growth is not linear during the first ten cycles, and magnesium silicate forms spontaneously on the SiO{sub 2}/Si substrates at 250 °C. Submonolayer sensitivity of SE is demonstrated by the analysis of each half-cycle and self-limiting adsorption, revealing characteristic features of hetero- and homo-MgO ALD processes.

  16. Monitoring Photodeposition of Polymer Films from Diacetylene Monomer Solutions Using In Situ Real-Time Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    Hui, Du; Kim, Jin-Sook; Kim, Yeon-Taik; An, Ilsin; Paley, Mark S.; Curreri, Peter A. (Technical Monitor)

    2002-01-01

    Photodeposition of thin polymer (PDAMNA) films from diacetylene monomer (DAMNA) solutions onto gold coated silica substrates with UV light was studied using the technique of in-situ real time spectroscopic ellipsometry. The dielectric function of PDAMNA was determined; and the thickness of the growing PDAMNA films over a 4 hour time interval was determined using a linear regression fit of the experimental data to a homogeneous four phase optical model. It was found that stirring the solution dramatically lowers the rate of film deposition, suggesting that convection can affect the attachment kinetics of the film to the substrate. Lastly, the morphology of the PDAMNA films was examined using non-contact mode atomic force microscopy.

  17. Study of InGaAs-based modulation doped field effect transistor structures using variable-angle spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Alterovitz, S. A.; Sieg, R. M.; Yao, H. D.; Snyder, P. G.; Woollam, J. A.; Pamulapati, J.; Bhattacharya, P. K.; Sekula-Moise, P. A.

    1991-01-01

    Variable-angle spectroscopic ellipsometry was used to estimate the thicknesses of all layers within the optical penetration depth of InGaAs-based modulation doped field effect transistor structures. Strained and unstrained InGaAs channels were made by molecular beam epitaxy (MBE) on InP substrates and by metal-organic chemical vapor deposition on GaAs substrates. In most cases, ellipsometrically determined thicknesses were within 10% of the growth-calibration results. The MBE-made InGaAs strained layers showed large strain effects, indicating a probable shift in the critical points of their dielectric function toward the InP lattice-matched concentration.

  18. Effect of Ta concentration on the refractive index of TiO{sub 2}:Ta studied by spectroscopic ellipsometry

    SciTech Connect

    Nurfani, Eka Kurniawan, Robi; Muhammady, Shibghatullah; Marlina, Resti; Sutjahja, Inge M.; Winata, Toto; Rusydi, Andrivo; Darma, Yudi

    2016-04-19

    We have investigated optical properties of Ta-doped TiO{sub 2} thin film on LaAlO{sub 3} (LAO) substrate using Spectroscopic Ellipsometry (SE) at room temperature. Amplitude ratio Ψ and phase difference L1 between p- and s- polarized light waves are obtained by multiple incident angles measurement (60°, 70°, and 80°) at energy range of 0.5 – 6.5 eV. In order to obtain optical properties for every Ta concentrations (0.01, 0.4, and 5 at. %), multilayer modelling was performed simultaneously by using Drude-Lorentz model. Refractive index and optical dispersion parameters were determined by Wemple-DiDomenico relation. In general, refractive index at zero photon energy n(0) increases by increasing Ta concentration. Furthermore, optical band gap shows a significant increasing due to presence of Ta dopant. In addition, other optical constants are discussed as well.

  19. Thermal treatment effects imposed on solid DNA cationic lipid complex with hexadecyltrimethylammonium chloride, observed by variable angle spectroscopic ellipsometry

    SciTech Connect

    Nizioł, Jacek

    2014-12-21

    DNA cationic lipid complexes are materials of properties required for applications in organic electronics and optoelectronics. Often, their thermal stability demonstrated by thermogravimetry is cited in the literature as important issue. However, little is known about processes occurring in heated solid DNA cationic lipid complexes. In frame of this work, thin films of Deoxyribonucleic acid-hexadecyltrimethylammonium chloride (DNA-CTMA) were deposited on silicon wafers. Samples were thermally annealed, and simultaneously, their optical functions were measured by spectroscopic ellipsometry. At lower temperatures, thermal expansion coefficient of solid DNA-CTMA was negative, but at higher temperatures positive. Thermally induced modification of absorption spectrum in UV-vis was observed. It occurred at a range of temperatures higher than this of DNA denaturation in solution. The observed phenomenon was irreversible, at least in time scale of the experiment (one day)

  20. Investigation of temperature dependent dielectric constant of a sputtered TiN thin film by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Tripura Sundari, S.; Ramaseshan, R.; Jose, Feby; Dash, S.; Tyagi, A. K.

    2014-01-01

    The temperature dependence of optical constants of titanium nitride thin film is investigated using Spectroscopic Ellipsometry (SE) between 1.4 and 5 eV in the temperature range of 300 K to 650 K in steps of 50 K. The real and imaginary parts of the dielectric functions ɛ1(E) and ɛ2(E) marginally increase with increase in temperature. A Drude Lorentz dielectric analysis based on free electron and oscillator model are carried out to describe the temperature behavior. With increase in temperature, the unscreened plasma frequency and broadening marginally decreased and increased, respectively. The parameters of the Lorentz oscillator model also showed that the relaxation time decreased with temperature while the oscillator energies increased. This study shows that owing to the marginal change in the refractive index with temperature, titanium nitride can be employed for surface plasmon sensor applications even in environments where rise in temperature is imminent.

  1. Multiple angle of incidence, spectroscopic, plasmon-enhanced, internal reflection ellipsometry for the characterization of solid-liquid interface processes

    NASA Astrophysics Data System (ADS)

    Petrik, P.; Agocs, E.; Kalas, B.; Kozma, P.; Fodor, B.; Nador, J.; Major, C.; Fried, M.

    2015-05-01

    A semi-cylindrical lens in Kretschmann geometry combined with a flow cell was designed for a commercial rotating compensator ellipsometer to perform internal reflection spectroscopic ellipsometry measurements, while allowing the use of multiple angles of incidence. A thin glass slide covered with a gold film was mounted between the half-cylindrical lens and a small-volume flow cell ensuring an improved sensitivity for protein adsorption experiments. The performance of the system was investigated depending on the angle of incidence, wavelength range and thickness of the gold films for surface plasmon resonance enhanced ellipsometric measurements, and a sensitivity increase was revealed compared to ellipsometric measurements with standard flow cells, depending on the measurement parameters and configuration. The sensitivity increase was demonstrated for fibrinogen adsorption.

  2. Nanoantenna-Enhanced Infrared Spectroscopic Chemical Imaging.

    PubMed

    Kühner, Lucca; Hentschel, Mario; Zschieschang, Ute; Klauk, Hagen; Vogt, Jochen; Huck, Christian; Giessen, Harald; Neubrech, Frank

    2017-05-26

    Spectroscopic infrared chemical imaging is ideally suited for label-free and spatially resolved characterization of molecular species, but often suffers from low infrared absorption cross sections. Here, we overcome this limitation by utilizing confined electromagnetic near-fields of resonantly excited plasmonic nanoantennas, which enhance the molecular absorption by orders of magnitude. In the experiments, we evaporate microstructured chemical patterns of C60 and pentacene with nanometer thickness on top of homogeneous arrays of tailored nanoantennas. Broadband mid-infrared spectra containing plasmonic and vibrational information were acquired with diffraction-limited resolution using a two-dimensional focal plane array detector. Evaluating the enhanced infrared absorption at the respective frequencies, spatially resolved chemical images were obtained. In these chemical images, the microstructured chemical patterns are only visible if nanoantennas are used. This confirms the superior performance of our approach over conventional spectroscopic infrared imaging. In addition to the improved sensitivity, our technique provides chemical selectivity, which would not be available with plasmonic imaging that is based on refractive index sensing. To extend the accessible spectral bandwidth of nanoantenna-enhanced spectroscopic imaging, we employed nanostructures with dual-band resonances, providing broadband plasmonic enhancement and sensitivity. Our results demonstrate the potential of nanoantenna-enhanced spectroscopic infrared chemical imaging for spatially resolved characterization of organic layers with thicknesses of several nanometers. This is of potential interest for medical applications which are currently hampered by state-of-art infrared techniques, e.g., for distinguishing cancerous from healthy tissues.

  3. Study of Receptor-Chaperone Interactions Using the Optical Technique of Spectroscopic Ellipsometry

    PubMed Central

    Kriechbaumer, Verena; Tsargorodskaya, Anna; Mustafa, Mohd K.; Vinogradova, Tatiana; Lacey, Joanne; Smith, David P.; Abell, Benjamin M.; Nabok, Alexei

    2011-01-01

    This work describes a detailed quantitative interaction study between the novel plastidial chaperone receptor OEP61 and isoforms of the chaperone types Hsp70 and Hsp90 using the optical method of total internal reflection ellipsometry (TIRE). The receptor OEP61 was electrostatically immobilized on a gold surface via an intermediate layer of polycations. The TIRE measurements allowed the evaluation of thickness changes in the adsorbed molecular layers as a result of chaperone binding to receptor proteins. Hsp70 chaperone isoforms but not Hsp90 were shown to be capable of binding OEP61. Dynamic TIRE measurements were carried out to evaluate the affinity constants of the above reactions and resulted in clear discrimination between specific and nonspecific binding of chaperones as well as differences in binding properties between the highly similar Hsp70 isoforms. PMID:21767504

  4. In-situ spectroscopic ellipsometry and structural study of HfO{sub 2} thin films deposited by radio frequency magnetron sputtering

    SciTech Connect

    Cantas, Ayten; Aygun, Gulnur; Basa, Deepak Kumar

    2014-08-28

    We have investigated the reduction of unwanted interfacial SiO{sub 2} layer at HfO{sub 2}/Si interface brought about by the deposition of thin Hf metal buffer layer on Si substrate prior to the deposition of HfO{sub 2} thin films for possible direct contact between HfO{sub 2} thin film and Si substrate, necessary for the future generation devices based on high-κ HfO{sub 2} gate dielectrics. Reactive rf magnetron sputtering system along with the attached in-situ spectroscopic ellipsometry (SE) was used to predeposit Hf metal buffer layer as well as to grow HfO{sub 2} thin films and also to undertake the in-situ characterization of the high-κ HfO{sub 2} thin films deposited on n-type 〈100〉 crystalline silicon substrate. The formation of the unwanted interfacial SiO{sub 2} layer and its reduction due to the predeposited Hf metal buffer layer as well as the depth profiling and also structure of HfO{sub 2} thin films were investigated by in-situ SE, Fourier Transform Infrared spectroscopy, and Grazing Incidence X-ray Diffraction. The study demonstrates that the predeposited Hf metal buffer layer has played a crucial role in eliminating the formation of unwanted interfacial layer and that the deposited high-κ HfO{sub 2} thin films are crystalline although they were deposited at room temperature.

  5. In situ spectroscopic ellipsometry growth studies on the Al-doped ZnO films deposited by remote plasma-enhanced metalorganic chemical vapor deposition

    SciTech Connect

    Volintiru, I.; Creatore, M.; Sanden, M. C. M. van de

    2008-02-01

    In situ spectroscopic ellipsometry (SE) was applied to study the pyramidlike and pillarlike growth of Al doped ZnO (AZO) films deposited by means of remote plasma-enhanced metalorganic chemical vapor deposition for transparent conductive oxide applications. Real time SE studies in the visible region allowed discerning between the two growth modes by addressing the time evolution of the bulk and surface roughness layer thickness. While the pillarlike mode is characterized by a constant growth rate, a slower rate in the initial stage (up to 150-200 nm film thickness), compared to the bulk, is observed for the growth of pyramidlike AZO films. The two modes differ also in terms of surface roughness development: a saturation behavior is observed for film thickness above 150-200 nm in the case of the pyramidlike films, while a slow linear increase with film thickness characterizes the pillarlike mode. By extending the SE analysis of the AZO films to the near infrared region, valuable information about the in grain properties could be extracted: excellent in grain mobility values, i.e., larger than 100 and 50 cm{sup 2}/V s, are determined for the pyramidlike and pillarlike AZO layers, respectively. The comparison between the outcome of the in situ real time SE studies and the ex situ electrical and chemical characterization highlights the limitations in the electron transport occurring in both types of films and allows one to address routes toward further improvement in AZO conductivity.

  6. Spectroscopic ellipsometry and fluorescence study of thermochromism in an ultrathin poly(diacetylene) film: Reversibility and transition kinetics

    SciTech Connect

    Carpick, R.W.; Mayer, T.M.; Sasaki, D.Y.; Burns, A.R.

    2000-05-16

    The authors have investigated the thermochromic transition of an ultrathin poly(diacetylene)film. The Langmuir film is composed of three layers of polymerized 10,12-pentacosadiynoic acid [Ch{sub 3}(CH{sub 2}){sub 11}C{triple_bond}CC{triple_bond}C(CH{sub 2}){sub 8}COOH] (poly-PCDA) organized into crystalline domains on a silicon substrate. Spectroscopic ellipsometry and fluorescence intensity measurements are obtained with in situ temperature control. Poly-PCDA films exhibit a reversible thermal transition between the initial blue form and an intermediate purple form that exists only at elevated temperature (between 303 and 333 K), followed by an irreversible transition to the red form after annealing above 320 K. The authors propose that the purple form is thermally distorted blue poly-PCDA and may represent a transitional configuration in the irreversible conversion to red. This hypothesis is supported by the appearance of unique features in the absorption spectra for each form as derived from the ellipsometry measurements. Significant fluorescence emission occurs only with the red form and is reduced at elevated temperatures while the absorption remains unchanged. Reduced emission is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence is likely related to thermal fluctuations of the hydrocarbon side chains. Time-resolved fluorescence measurements of the irreversible transition have been performed. Using a first-order kinetic analysis of these measurements, the authors deduce an energy barrier of 17.6 {+-} 1.1 kcal mol{sup {minus}1} between the blue and red forms.

  7. [Infrared spectroscopic determinations of mannitol].

    PubMed

    Toffel-Nadolny, P

    1981-01-01

    Three different infrared-spectra of Mannit were obtained according to unused Mannit, melted Mannit, and the crystallized form out of methanol. The melting points of the three Mannit-modifications were in accordance 166.5 degrees C. Similar effects have been found with Diethylbarbituric acid. X-ray diffraction patterns and main differences of the infrared-spectra between v = 1100- and 1500 cm-1 - the range, where the molecule in bulk is characterized -, verify three different crystal structures of Mannit.

  8. Optical characterization of group-iv semiconductor alloys using spectroscopic ellipsometry and high resolution x-ray diffraction

    NASA Astrophysics Data System (ADS)

    Fernando, Nalin S.

    Germanium is a group IV semiconductor widely used in the semiconductor optoelectronic industry. It is an indirect band material with the conduction band minimum at the L point. which is 0.140 eV below the conduction band at the F point. However. the band structure of Ge is a strong function of temperature. strain. alloy composition and dopant concentration. It has been reported that. at about 2% tensile strain. Ge becomes a direct band gap material. indicating the possibility of wide spread applications of Ge-based photonic devices. Alloying Ge with Sn also makes it a direct band gap material. relaxed Ge 1_ySny alloys become direct at 6-10% Sn. In addition. Ge1_s_ ySixSny ternary alloy with two compositional degrees of freedom allows decoupling of the lattice constant and electronic structures simultaneously. Band gap engineering of Ge by controlling strain. alloying composition and dopant concentration has attracted the interest of researchers in materials science. Hence. the knowledge of the compositional. strain. and temperature dependence of the Ge1_x_ySi_ xSny band structure is critical for the design of photonic devices with desired interband transition energy. This dissertation focuses on the optical characterization of the compositional. strain. and temperature dependence of the optical properties of Ge-Si-Sn alloys on Ge/Si substrates using spectroscopic ellipsometry. We use high resolution X-ray diffraction (HRXRD). X-ray reflectivity (XRR) and atomic force microscopy (AFM) to characterize the strain. composition. thickness. surface roughness of the Ge-Si-Sn epilayers on Ge/Si substrates. The temperature dependent thermal expansion coefficient of Ge is larger than Si. Therefore a Ge film. which is relaxed at the growth temperature ( 800 K) on Si substrate. likes to contract more rapidly compared to Si upon cooling down to lower temperatures. and will experience a temperature dependent biaxial tensile stress. We predict the strain dependence the E1 and E 1

  9. Spectroscopic Ellipsometry Studies of Ag and ZnO Thin Films and Their Interfaces for Thin Film Photovoltaics

    NASA Astrophysics Data System (ADS)

    Sainju, Deepak

    Many modern optical and electronic devices, including photovoltaic devices, consist of multilayered thin film structures. Spectroscopic ellipsometry (SE) is a critically important characterization technique for such multilayers. SE can be applied to measure key parameters related to the structural, optical, and electrical properties of the components of multilayers with high accuracy and precision. One of the key advantages of this non-destructive technique is its capability of monitoring the growth dynamics of thin films in-situ and in real time with monolayer level precision. In this dissertation, the techniques of SE have been applied to study the component layer materials and structures used as back-reflectors and as the transparent contact layers in thin film photovoltaic technologies, including hydrogenated silicon (Si:H), copper indium-gallium diselenide (CIGS), and cadmium telluride (CdTe). The component layer materials, including silver and both intrinsic and doped zinc oxide, are fabricated on crystalline silicon and glass substrates using magnetron sputtering techniques. These thin films are measured in-situ and in real time as well as ex-situ by spectroscopic ellipsometry in order to extract parameters related to the structural properties, such as bulk layer thickness and surface roughness layer thickness and their time evolution, the latter information specific to real time measurements. The index of refraction and extinction coefficient or complex dielectric function of a single unknown layer can also be obtained from the measurement versus photon energy. Applying analytical expressions for these optical properties versus photon energy, parameters that describe electronic transport, such as electrical resistivity and electron scattering time, can be extracted. The SE technique is also performed as the sample is heated in order to derive the effects of annealing on the optical properties and derived electrical transport parameters, as well as the

  10. Integrated photonics for infrared spectroscopic sensing

    NASA Astrophysics Data System (ADS)

    Lin, Hongtao; Kita, Derek; Han, Zhaohong; Su, Peter; Agarwal, Anu; Yadav, Anupama; Richardson, Kathleen; Gu, Tian; Hu, Juejun

    2017-05-01

    Infrared (IR) spectroscopy is widely recognized as a gold standard technique for chemical analysis. Traditional IR spectroscopy relies on fragile bench-top instruments located in dedicated laboratory settings, and is thus not suitable for emerging field-deployed applications such as in-line industrial process control, environmental monitoring, and point-ofcare diagnosis. Recent strides in photonic integration technologies provide a promising route towards enabling miniaturized, rugged platforms for IR spectroscopic analysis. Chalcogenide glasses, the amorphous compounds containing S, Se or Te, have stand out as a promising material for infrared photonic integration given their broadband infrared transparency and compatibility with silicon photonic integration. In this paper, we discuss our recent work exploring integrated chalcogenide glass based photonic devices for IR spectroscopic chemical analysis, including on-chip cavityenhanced chemical sensing and monolithic integration of mid-IR waveguides with photodetectors.

  11. Investigation of PTFE transfer films by infrared emission spectroscopy and phase-locked ellipsometry

    NASA Technical Reports Server (NTRS)

    Lauer, James L.; Bunting, Bruce G.; Jones, William R., Jr.

    1987-01-01

    When a PTFE sheet was rubbed unidirectionally over a smooth surface of stainless steel an essentially monomolecular transfer film was formed. By ellipsometric and emission infrared spectroscopic techniques it was shown that the film was 10 to 15 A thick and birefringent. From the intensity differences of infrared bands obtained with a polarizer passing radiation polarized in mutually perpendicular planes, it was possible to deduce transfer film orientation with the direction of rubbing. After standing in air for several weeks the transfer films apparently increased in thickness by as much as threefold. At the same time both the index of refraction and the absorption index decreased. Examination of the surfaces by optical and electron microscopies showed that the films had become porous and flaky. These observations were consistent with previous tribological measurements. The coefficients of friction decreased with the formation of the transfer film but increased again as the film developed breaks. The applicability of the ellipsometric and polarized infrared emission techniques to the identification of monomolecular tribological transfer films of polymers such as PTFE has been demonstrated.

  12. Investigation of PTFE transfer films by infrared emission spectroscopy and phase-locked ellipsometry

    NASA Technical Reports Server (NTRS)

    Lauer, James L.; Bunting, Bruce G.; Jones, William R., Jr.

    1988-01-01

    When a PTFE sheet was rubbed unidirectionally over a smooth surface of stainless steel an essentially monomolecular transfer film was formed. by ellipsometric and emission infrared spectroscopic techniques it was shown that the film was 10 to 15 A thick and birefringent. From the intensity differences of infrared bands obtained with a polarizer passing radiation polarized in mutually perpendicular planes, it was possible to deduce transfer film orientation with the direction of rubbing. After standing in air for several weeks the transfer films apparently increased in thickness by as much as threefold. At the same time both the index of refraction and the absorption index decreased. Examination of the surfaces by optical and electron microscopies showed that the films had become porous and flaky. These observations were consistent with previous tribological measurements. The coefficients of friction decreased with the formation of the transfer film but increased again as the film developed breaks. The applicability of the ellipsometric and polarized infrared emission techniques to the identification of monomolecular tribological transfer films of polymers such as PTFE has been demonstrated.

  13. Spectroscopic ellipsometry study of Pb1-xEuxSe(0⩽x⩽0.45)

    NASA Astrophysics Data System (ADS)

    Kanazawa, Hideyuki; Adachi, Sadao; Yamaguchi, Tsutomu; Murashige, Shinichi; Murakami, Kensuke

    1999-09-01

    We have measured the complex dielectric function, ɛ(E)=ɛ1(E)+iɛ2(E), of Pb1-xEuxSe in the 1.2-5.0 eV photon-energy range by spectroscopic ellipsometry at room temperature. The Pb1-xEuxSe crystals were grown by the conventional Bridgman method (x=0) and by hot-wall epitaxy on (111) BaF2 substrates at 300 °C (0.09⩽x⩽0.45). The measured ɛ(E) data revealed distinct structures at two critical-point (CP) energies, E1 and E2. The second-derivative spectra of the complex dielectric function, d2ɛ(E)/dE2, were analyzed using a theoretical model called the model dielectric function. The CP parameters, such as the CP energy, amplitude, and broadening, as a function of alloy composition x were fit determined from these derivative analyses. This parameterization of the CP parameters enabled us to calculate ɛ(E) and its related optical constants for optional alloy composition and photon energy.

  14. Characterization of Si (sub X)Ge (sub 1-x)/Si Heterostructures for Device Applications Using Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    Sieg, R. M.; Alterovitz, S. A.; Croke, E. T.; Harrell, M. J.; Tanner, M.; Wang, K. L.; Mena, R. A.; Young, P. G.

    1993-01-01

    Spectroscopic ellipsometry (SE) characterization of several complex Si (sub X)Ge (sub 1-x)/Si heterostructures prepared for device fabrication, including structures for heterojunction bipolar transistors (HBT), p-type and n-type heterostructure modulation doped field effect transistors, has been performed. We have shown that SE can simultaneously determine all active layer thicknesses, Si (sub X)Ge (sub 1-x) compositions, and the oxide overlayer thickness, with only a general knowledge of the structure topology needed a priori. The characterization of HBT material included the SE analysis of a Si (sub X)Ge (sub 1-x) layer deeply buried (600 nanometers) under the silicon emitter and cap layers. In the SE analysis of n-type heterostructures, we examined for the first time a silicon layer under tensile strain. We found that an excellent fit can be obtained using optical constants of unstrained silicon to represent the strained silicon conduction layer. We also used SE to measure lateral sample homogeneity, providing quantitative identification of the inhomogeneous layer. Surface overlayers resulting from prior sample processing were also detected and measured quantitatively. These results should allow SE to be used extensively as a non-destructive means of characterizing Si (sub X)Ge (sub 1-x)/Si heterostructures prior to device fabrication and testing.

  15. Determination of the optical properties and size dispersion of Si nanoparticles within a dielectric matrix by spectroscopic ellipsometry

    SciTech Connect

    Keita, A.-S.; Naciri, A. En Battie, Y.; Delachat, F.; Carrada, M.; Ferblantier, G.; Slaoui, A.

    2014-09-14

    We report on a comparative study between dielectric functions of Si nanoparticles (Si-NPs) obtained from Bruggeman effective medium approximation (BEMA), Maxwell-Garnett (MG), and a modified Maxwell-Garnett (MMG) models. Unlike BEMA and MG, a size-distribution dependent dielectric function of Si-NPs is considered in the introduced MMG model. We show that the standard deviation σ of a size distribution can be evaluated by analyzing the imaginary part of the dielectric functions of Si-NPs extracted from BEMA and MMG. In order to demonstrate this, several samples composed of Si-NPs embedded in silicon-rich silicon nitride are investigated by spectroscopic ellipsometry over the photon energy range varying between 2 and 4 eV. Assuming a lognormal size distribution of the Si nanoparticles, it is evidenced that the parameter σ ranges between 1.15 and 1.35. The values of size dispersion deduced by this methodology are in good agreement with TEM observations.

  16. Spectroscopic Ellipsometry Measurements of Wurtzite Gallium Nitride Surfaces as a Function of Buffered Oxide Etch Substrate Submersion

    NASA Astrophysics Data System (ADS)

    Szwejkowski, Chester; Constantin, Costel; Duda, John; Hopkins, Patrick; Optical Studies of GaN interfaces Collaboration

    2013-03-01

    Gallium nitride (GaN) is considered the most important semiconductor after the discovery of silicon. Understanding the optical properties of GaN surfaces is imperative in determining the utility and applicability of this class of materials to devices. In this work, we present preliminary results of spectroscopic ellipsometry measurements as a function of surface root mean square (RMS). We used commercially available 5mm x 5mm, one side polished GaN (3-7 μm)/Sapphire (430 μm) substrates that have a wurtzite crystal structure and they are slightly n-type doped. The GaN substrates were cleaned with Acetone (20 min)/Isopropanol(20 min)/DI water (20 min) before they were submerged into Buffered Oxide Etch (BOE) for 10s - 60s steps. This BOE treatment produced RMS values of 1-30 nm as measured with an atomic force microscope. Preliminary qualitative ellipsometric measurements show that the complex refractive index and the complex dielectric function decrease with an increase of RMS. More measurements need to be done in order to provide explicit quantitative results. This work was supported by the 4-VA Collaborative effort between James Madison University and University of Virginia.

  17. Etching of a-Si:H thin films by hydrogen plasma: a view from in situ spectroscopic ellipsometry.

    PubMed

    Hadjadj, Aomar; Larbi, Fadila; Gilliot, Mickaël; Roca i Cabarrocas, Pere

    2014-08-28

    When atomic hydrogen interacts with hydrogenated amorphous silicon (a-Si:H), the induced modifications are of crucial importance during a-Si:H based devices manufacturing or processing. In the case of hydrogen plasma, the depth of the modified zone depends not only on the plasma processing parameters but also on the material. In this work, we exposed a-Si:H thin films to H2 plasma just after their deposition. In situ UV-visible spectroscopic ellipsometry measurements were performed to track the H-induced changes in the material. The competition between hydrogen insertion and silicon etching leads to first order kinetics in the time-evolution of the thickness of the H-modified zone. We analyzed the correlation between the steady state structural parameters of the H-modified layer and the main levers that control the plasma-surface interaction. In comparison with a simple doped layer, exposure of a-Si:H based junctions to the same plasma treatment leads to a thinner H-rich subsurface layer, suggesting a possible charged state of hydrogen diffusing.

  18. Contact angle hysteresis: study by dynamic cycling contact angle measurements and variable angle spectroscopic ellipsometry on polyimide.

    PubMed

    Hennig, A; Eichhorn, K-J; Staudinger, U; Sahre, K; Rogalli, M; Stamm, M; Neumann, A W; Grundke, K

    2004-08-03

    The phenomenon of contact angle hysteresis was studied on smooth films of polyimide, a polymer type used in the microelectronic industry, by dynamic cycling contact angle measurements based on axisymmetric drop shape analysis-profile in combination with variable angle spectroscopic ellipsometry (VASE). It was found that both advancing and receding contact angles became smaller with increasing the number of cycles and are, therefore, not a property of the dry solid alone. The changes of the wetting behavior during these dynamic cycling contact angle measurements are attributed mainly to swelling and/or liquid retention. To reveal the water-induced changes of the polymer film, the polyimide surface was studied before and after the contact with a water droplet by VASE. Both the experimental ellipsometric spectrum for Delta and that for Psi as well as the corresponding simulations show characteristic shifts due to the contact with water. The so-called effective medium approximation was applied to recover information about the thickness and effective optical constants of the polymer layer from the ellipsometrically measured values of Delta and Psi. On the basis of these results, the swelling and retention behavior of the polyimide films in contact with water droplets were discussed.

  19. A view of the implanted SiC damage by Rutherford backscattering spectroscopy, spectroscopic ellipsometry, and transmission electron microscopy

    SciTech Connect

    Battistig, G.; Khanh, N. Q.; Petrik, P.; Lohner, T.; Dobos, L.; Pecz, B.; Garcia Lopez, J.; Morilla, Y.

    2006-11-01

    4H-SiC single crystalline substrates were implanted at room temperature with 150 keV Al{sup +} ions using fluences of 4x10{sup 14}, 1x10{sup 15}, and 2x10{sup 15} cm{sup -2} with current density of 2.5 {mu}A cm{sup -2}. The samples were subsequently annealed at 1100 deg. C in N{sub 2} for 1 h in order to analyze their structural recovery. The disorder induced in both sublattices by the Al{sup +} ions was studied by backscattering spectrometry in channeling geometry with a 3.5 MeV He{sup 2+} beam. The results were compared with the optical properties of the samples measured by spectroscopic ellipsometry. In a previous work, we concluded that during the postimplantation annealing of a highly damaged SiC crystalline material the short distance order can be recovered, while the long distance disorder remains. We also presented the possibility to have grains of different polytypes oriented faraway from the original direction. Now, this alternative is confirmed by the cross-sectional transmission and high resolution electron microscopy studies, carried out to obtain information about the crystal structure.

  20. Anatomy of μc-Si thin films by plasma enhanced chemical vapor deposition: An investigation by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Losurdo, M.; Rizzoli, R.; Summonte, C.; Cicala, G.; Capezzuto, P.; Bruno, G.

    2000-09-01

    A detailed analysis of the anatomy of microcrystalline (μc-Si) films deposited by plasma enhanced chemical vapor deposition from both SiF4-H2 and SiH4-H2 mixtures is performed by spectroscopic ellipsometry (SE). Specifically, the μc-Si film anatomy consists of an interface layer at the substrate/μc-Si bulk layer, a bulk μc-Si layer, and a surface porous layer. All these layers have their own microstructures, which need to be highlighted, since it is this overall anatomy which determines the optical properties of μc-Si films. The ability of SE to discriminate the complex microstructure of μc-Si thin films is emphasized also by the comparison with the x-ray diffraction data which cannot provide unambiguous information regarding the distribution of the crystalline and the amorphous phases along the μc-Si film thickness. Through the description of the μc-Si film anatomy, information on the effect of the growth precursors (SiF4 or SiH4) and of the substrate (c-Si or Corning glass) on the growth dynamics can be obtained. The key role of the F-atoms density and, therefore, of the etching-to-deposition competition on the growth mechanism and film microstructure is highlighted.

  1. Surface roughness estimation of MBE grown CdTe/GaAs(211)B by ex-situ spectroscopic ellipsometry

    SciTech Connect

    Karakaya, Merve; Bilgilisoy, Elif; Arı, Ozan; Selamet, Yusuf

    2016-07-15

    Spectroscopic ellipsometry (SE) ranging from 1.24 eV to 5.05 eV is used to obtain the film thickness and optical properties of high index (211) CdTe films. A three-layer optical model (oxide/CdTe/GaAs) was chosen for the ex-situ ellipsometric data analysis. Surface roughness cannot be determined by the optical model if oxide is included. We show that roughness can be accurately estimated, without any optical model, by utilizing the correlation between SE data (namely the imaginary part of the dielectric function, <ε{sub 2} > or phase angle, ψ) and atomic force microscopy (AFM) roughness. <ε{sub 2} > and ψ values at 3.31 eV, which corresponds to E{sub 1} critical transition energy of CdTe band structure, are chosen for the correlation since E{sub 1} gives higher resolution than the other critical transition energies. On the other hand, due to the anisotropic characteristic of (211) oriented CdTe surfaces, SE data (<ε{sub 2} > and ψ) shows varieties for different azimuthal angle measurements. For this reason, in order to estimate the surface roughness by considering these correlations, it is shown that SE measurements need to be taken at the same surface azimuthal angle. Estimating surface roughness in this manner is an accurate way to eliminate cumbersome surface roughness measurement by AFM.

  2. Spectroscopic ellipsometry studies of GaN films deposited by reactive rf sputtering of GaAs target

    SciTech Connect

    Biswas, A.; Bhattacharyya, D.; Sahoo, N. K.; Yadav, Brajesh S.; Major, S. S.; Srinivasa, R. S.

    2008-04-15

    GaN films have been deposited by reactive rf sputtering of GaAs target in 100% nitrogen ambient on quartz substrates at different substrate temperatures ranging from room temperature to 700 deg. C. A series of films, from arsenic-rich amorphous to nearly arsenic-free polycrystalline hexagonal GaN, has been obtained. The films have been characterized by phase modulated spectroscopic ellipsometry to obtain the optical parameters, viz., fundamental band gap, refractive index, and extinction coefficient, and to understand their dependence on composition and microstructure. A generalized optical dispersion model has been used to carry out the ellipsometric analysis for amorphous and polycrystalline GaN films and the variation of the optical parameters of the films has been studied as a function of substrate temperature. The refractive index values of polycrystalline films with preferred orientation of crystallites are slightly higher (2.2) compared to those for amorphous and randomly oriented films. The dominantly amorphous GaN film shows a band gap of 3.47 eV, which decreases to 3.37 eV for the strongly c-axis oriented polycrystalline film due to the reduction in amorphous phase content with increase in substrate temperature.

  3. Interplay of electron correlations and localization in disordered β-tantalum films: Evidence from dc transport and spectroscopic ellipsometry study

    NASA Astrophysics Data System (ADS)

    Kovaleva, N. N.; Chvostova, D.; Bagdinov, A. V.; Petrova, M. G.; Demikhov, E. I.; Pudonin, F. A.; Dejneka, A.

    2015-02-01

    We report the dc transport (5 K ≲ T ≲ 380 K) and spectroscopic ellipsometry (0.8 eV ≤ hν ≤ 8.5 eV, T ≃ 300 K) study of β-Ta films prepared by rf sputtering deposition as a function of their thickness in the range 2.5 nm ≲ d ≲ 200 nm. The dc transport of the β-Ta films with a thickness d ≳ 25 nm is characterized by negative temperature coefficient of resistivity (TCR) caused by localization effects peculiar of highly disordered metals. Their dielectric function spectra display non-metallic-like behavior due to the presence of the pronounced band at 2 eV. We found that with increasing TCR absolute value, specifying elevated degree disorder, the optical spectral weight (SW) of free charge carriers decreases. The associated SW is recovered in the range of Mott-Hubbard transitions, indicating the mechanism of localization enhancement by electronic correlations in disordered metals.

  4. Spectroscopic Ellipsometry, Auger and STM Characterization of Epitaxial Graphene grown on 6H-SiC (0001)

    NASA Astrophysics Data System (ADS)

    Nelson, Florence; Diebold, Alain C.; Sandin, Andreas; Dougherty, Dan; Aspnes, Dave; Rowe, Jack

    2012-02-01

    Graphene grown by the thermal decomposition of SiC has become of interest to the semiconductor industry due to its unique, high-mobility electronic structure. The growth is of a more scalable nature when compared to exfoliated flakes produced from the ``scotch tape'' method. The resulting film rests on a ``buffer layer'' separating the graphene from the underlying substrate, which is thought to consist of a mixture of sp^2 and non-sp^2 bonding due to the sp^3 bonding of the SiC substrate. The mobilities of the graphene layer have previously been shown to differ from that of the interface layer. We investigate the difference in the optical response of the two layers using Spectroscopic Ellipsometry and find a red-shift of the ˜4.5 eV absorbance found in graphene due to the exciton-domianted transition at the M point of the Brilloun Zone. The structural characterization of the films are performed through Auger and STM on substrates which were cleaned by CMP and chemical etching methods prior to the epitaxial growth in UHV.

  5. Quantifying protein adsorption on combinatorially sputtered Al-, Nb-, Ta- and Ti-containing films with electron microprobe and spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Byrne, T. M.; Lohstreter, L.; Filiaggi, M. J.; Bai, Zhijun; Dahn, J. R.

    2009-04-01

    Although metallic biomaterials are widely used, systematic studies of protein adsorption onto such materials are generally lacking. Combinatorial binary libraries of Al 1-xNb x, Al 1-xTa x, Al 1-xTi x, Nb 1-xTa x, Nb 1-xTi x, and Ta 1-xTi x (0 ⩽ x ⩽ 1) and a ternary library of Al 1-xTi xTa y (0 ⩽ x ⩽ 1 and 0 ⩽ y ⩽ 0.7), along with their corresponding pure element films were sputtered onto glass substrates using a unique magnetron sputtering technique. Films were characterized with wavelength-dispersive spectroscopy (WDS), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). Fibrinogen and albumin adsorption amounts were measured by wavelength-dispersive spectroscopy (WDS) and spectroscopic ellipsometry (SE) equipment, both high throughput techniques with automated motion stage capabilities. Protein adsorption onto these films was found to be closely correlated to the alumina surface fraction, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen and albumin. Protein adsorption amounts obtained with WDS and SE were in good agreement for all films.

  6. Interplay of electron correlations and localization in disordered β-tantalum films: Evidence from dc transport and spectroscopic ellipsometry study

    SciTech Connect

    Kovaleva, N. N.; Chvostova, D.; Dejneka, A.; Bagdinov, A. V.; Petrova, M. G.; Demikhov, E. I.; Pudonin, F. A.

    2015-02-02

    We report the dc transport (5 K ≲ T ≲ 380 K) and spectroscopic ellipsometry (0.8 eV ≤ hν ≤ 8.5 eV, T ≃ 300 K) study of β-Ta films prepared by rf sputtering deposition as a function of their thickness in the range 2.5 nm ≲ d ≲ 200 nm. The dc transport of the β-Ta films with a thickness d ≳ 25 nm is characterized by negative temperature coefficient of resistivity (TCR) caused by localization effects peculiar of highly disordered metals. Their dielectric function spectra display non-metallic-like behavior due to the presence of the pronounced band at 2 eV. We found that with increasing TCR absolute value, specifying elevated degree disorder, the optical spectral weight (SW) of free charge carriers decreases. The associated SW is recovered in the range of Mott-Hubbard transitions, indicating the mechanism of localization enhancement by electronic correlations in disordered metals.

  7. Infrared spectroscopic imaging of kidney tumor tissue

    NASA Astrophysics Data System (ADS)

    Sablinskas, V.; Steiner, G.; Koch, E.; Ceponkus, J.; Pucetaite, M.; Strazdaite, S.; Urboniene, V.; Jankevicius, F.

    2011-02-01

    Infrared spectroscopic imaging of cancerous kidney tissue was performed by means of FTIR microscopy. The spectra of thin tissue cryosections were collected with 64x64 MCT FPA detector and imaging area was increased up to 5.4×5.4 mm by mapping by means of PC controlled x,y stage. Chemical images of the samples were constructed using statistical treatment of the raw spectra. Several unsupervised and supervised statistical methods were used. The imaging results are compared with results of the standard histopathological analysis. It was concluded that application of method of cluster analysis ensures the best contrast of the images. It was found that border between cancerous and normal tissues visible in the infrared spectroscopic image corresponds with the border visible in histopathological image. Closer examination of the infrared spectroscopic image reveals that small domains of cancerous cells are found beyond the border in areas distant from the border up to 3 mm. Such domains are not visible in the histopathological images. The smallest domains found in the infrared images are approx. 60 μm.

  8. Infrared spectroscopic imaging of renal tumor tissue

    NASA Astrophysics Data System (ADS)

    Šablinskas, Valdas; Urbonienė, Vidita; Ceponkus, Justinas; Laurinavicius, Arvydas; Dasevicius, Darius; Jankevičius, Feliksas; Hendrixson, Vaiva; Koch, Edmund; Steiner, Gerald

    2011-09-01

    Fourier transform infrared (FTIR) spectroscopic imaging has been used to probe the biochemical composition of human renal tumor tissue and adjacent normal tissue. Freshly resected renal tumor tissue from surgery was prepared as a thin cryosection and examined by FTIR spectroscopic imaging. Tissue types could be discriminated by utilizing a combination of fuzzy k-means cluster analysis and a supervised classification algorithm based on a linear discriminant analysis. The spectral classification is compared and contrasted with the histological stained image. It is further shown that renal tumor cells have spread in adjacent normal tissue. This study demonstrates that FTIR spectroscopic imaging can potentially serve as a fast and objective approach for discrimination of renal tumor tissue from normal tissue and even in the detection of tumor infiltration in adjacent tissue.

  9. Infrared Spectroscopic Imaging for Prostate Pathology

    DTIC Science & Technology

    2008-03-01

    X (2002) Genetics-based machine learning using fine-grained parallelism for data mining. Doctoral dissertation, Enginyeria i Arquitectura La Salle... Arquitectura La Salle. Ramon Llull University, Barcelona, Catalonia, European Union, February, 2002. [22] X. Llorà and J. Garrell. Knowledge...spectroscopic imaging using an infrared focal-plane array detector. Anal Chem 1995, 67, (19), 3377-81. 9.Bhargava, R.; Wang, S. Q .; Koenig, J. L., FTIR

  10. Determination of Mean Thickness of an Oxide Layer on a Silicon Sphere by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Zhang, Ji-Tao; Li, Yan; Luo, Zhi-Yong; Wu, Xue-Jian

    2010-05-01

    One of the biggest obstacles to reduce the uncertainty of the Avogadro constant NA is such that there will be an oxide layers on the surface of a silicon sphere. The thickness of this layer is measured by a modified spectroscopic ellipsometer, which can eliminate the influence of the curved surface, and the results are calibrated by x-ray reflectivity. Fifty positions distributed nearly uniformly on the surface of the silicon sphere are measured twice. The results show that the mean thickness of the overall oxide layer is 3.75 nm with the standard uncertainty of 0.21 nm, which means that the relative uncertainty component of NA owing to this layer can be reduced to 1.2 × 10-8.

  11. Thermal dependence of optical properties of silver thin films studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Sundari, S. Tripura; Dash, S.; Tyagi, A. K.

    2012-06-01

    The thermal dependence of the dielectric constants of silver thin films were investigated between 300 K and 650 K by spectroscopic ellipsometer in the energy range 1.5 to 5 eV. The studies showed an increase in the imaginary part (ɛ2) of the dielectric function, a shift of ˜300 meV in the onset of the main absorption (L3-L2'(EF)), appearance of additional absorption above 500 K which is attributed to (L2'- L1) and increased broadening of the absorption spectra owing to smearing of Fermi level. It was found that the unscreened plasma frequency ωpu associated with resonant oscillations of conduction electrons increased while the relaxation time decreased with increase in temperature.

  12. Surface Effects of the HgI(2) Crystal Characterized by Spectroscopic Ellipsometry.

    PubMed

    En Naciri, A; Johann, L; Kleim, R; Sieskind, M; Amann, M

    2001-09-01

    We report on determination of the surface effects of mercuric iodide (HgI(2)) uniaxial HgI(2) optical parameters with a fixed-polarizer, rotating-polarizer, and fixed-analyzer spectroscopic ellipsometer (PRPSE) after chemical polishing. The characteristics of the chemical complex [KHgI(3), H(2)O] that forms on the HgI(2) surface during KI etching have been investigated over the spectral range from 400 to 800 nm. Surface roughness and effects of the ellipsometric parameters of HgI(2) were treated, and the thickness of the layer formed on the surface was determined and analyzed by PRPSE. The surface roughness was modeled with the Bruggeman effective medium approximation.

  13. Structural studies on Si:H network before and after solid phase crystallization using spectroscopic ellipsometry: Correlation with Raman spectroscopy and transmission electron microscopy

    NASA Astrophysics Data System (ADS)

    Goswami, Romyani; Ray, Swati

    2013-10-01

    The structure of hydrogenated silicon films (Si:H) before and after solid phase crystallization (SPC) has been investigated by detailed study of spectroscopic ellipsometry (SE). The Si:H films have been deposited by radio frequency plasma enhanced chemical vapor deposition (RF PECVD) system varying deposition power density from 0.03 W/cm2 to 0.46 W/cm2, just below the onset of amorphous to nano-crystalline transition region. Solid phase crystallization of the Si:H network has been done by thermal annealing of the films in a vacuum furnace. Different bulk compositions of the as deposited Si:H network and annealed (polycrystalline) films have been calculated from the fitted parameters obtained from the simulation of the ellipsometry data by Bruggeman effective medium approximation (BEMA) method. More compact and void free structure in the bulk layer of the as deposited films has been observed at low power deposition region. Whereas void fraction in the bulk and surface roughness layer has increased with increase of deposition power density. For the annealed films higher crystallinity at the bulk layer with fewer voids has been observed at the low power region but in the surface roughness layer void fraction dominates in all the low and high power deposited films. The results obtained from the spectroscopic ellipsometry study have been correlated with Raman spectroscopy and transmission electron microscopy for both the as deposited and annealed films.

  14. Use of Variable Angle Spectroscopic Ellipsometry in Order to Determine Contaminant Optical Properties

    NASA Technical Reports Server (NTRS)

    Hughes, C.; Workman, G.; Reynolds, J.

    1997-01-01

    In order to measure contaminant levels found in the manufacture of the Redesigned Solid Rocket Motor (RSRM), optical properties of the contaminants are needed to develop standards for calibration purposes. Specific to our efforts is the determination of the complex index of refraction for a hydrocarbon mixture and a commercial methyl siloxane. Using ellipsometric measurements with multiple angles of incident and a range of wavelengths in the near infrared a determination of the index of refraction and the extinction coefficient were made for the contaminants. This paper will present the optical techniques and modeling approach used to determine these optical constants of the hydrocarbon mixture and the methyl siloxane studied.

  15. Ion bombardment effects in low-pressure plasmas: In situ spectroscopic ellipsometry and Monte-Carlo simulation study

    NASA Astrophysics Data System (ADS)

    Amassian, Aram

    Plasma-enhanced chemical vapor deposition (PECVD) is a very versatile, yet highly complex process which has attracted the attention of the optical coatings community for its ability to synthesize thin film materials with a wide and continuous range of optical properties. In this work, we investigate the effects of ion-surface interactions in the case of hyperthermal ions (100 to 103 eV) accelerated at the RF-biased electrode of a PECVD reactor, in order to better understand their effect beneath the substrate surface, on growing films, and on interface formation. We apply in situ real-time spectroscopic ellipsometry (RTSE): (1) to monitor modifications at the surface of model c-Si(001) substrates exposed to low-pressure O2 plasma at the RF-powered electrode as a function of substrate bias voltage (VB), (2) to determine interface broadening during the initial stages of TiO 2 deposition on SiO2, and (3) to monitor the Ar plasma treatment of the interface between porous and dense Si3N4 films, and its effect on the growth of multilayer dense/porous stacks. The first part of this thesis focuses on the modifications of a c-Si substrate resulting from an exposure to an O2 plasma at the RF-powered electrode by using ex situ variable angle spectroscopic ellipsometry (VASE). The study demonstrates the presence of significant sub-surface modifications, giving rise to a top layer oxide (SiO 2) and an interfacial damage layer on c-Si(001). The depth of modifications was found to scale with ˜|VB|½ , increasing from ˜3.4 nm up to ˜9.6 nm for V B ranging between -60 and -600 V after 10 minutes of plasma exposure. Static Monte-Carlo TRIM simulations confirmed that the modifications and scaling can be explained on the basis of depth-dependent O transport by ion implantation. In the second part of this work, we studied the dynamical effects of plasma-surface interactions by using in situ RTSE in combination with TRIDYN (a dynamical version of TRIM) simulations. TRIDYN simulations

  16. Exploration of optical behavior of Cd1-xNixTe thin films by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Mahmood, Arshad; Aziz, U.; Rashid, R.; Shah, A.; Ali, Zahid; Raza, Qaiser; Raffi, M.; Shakir, Imran

    2014-12-01

    We report on the tunability over the optical behavior of e-beam evaporated nanocrystalline thin films of Cd1-xNixTe (0 ≤ x ≤ 0.15). X-ray diffraction analysis reveals the polycrystalline nature of the film having zinc blend structure with a preferred growth direction along (111) plane parallel to the substrate. X-ray diffraction results also indicate that the grain size of the films decreases from 27.13 nm to 16.23 nm with an increase in Ni concentration from 0 to 15 at%. The compositional analysis of the film was carried out by energy dispersive x-ray analysis (EDX) which confirms the successful inclusion of Ni in CdTe matrix. Spectroscopic ellipsometery (SE) results demonstrate that the band gap of the grown films increases from 1.48 eV to 1.86 eV while refractive index (n) and extinction coefficient (k) decrease with the increasing Ni concentration. The increase in band gap energy of Cd1-xNixTe films as a function of Ni concentration was confirmed by spectrophotometric analysis.

  17. Influence of annealing temperature and Sn doping on the optical properties of hematite thin films determined by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    de Souza, Lígia P.; Chaves, Rodrigo O. G.; Malachias, Angelo; Paniago, Roberto; Ferreira, Sukarno O.; Ferlauto, Andre S.

    2016-06-01

    Hematite (α-Fe2O3) thin films were prepared by sol-gel route and investigated for application in H2 generation by photo-assisted water splitting. The photoelectrochemical (PEC) performance was shown to increase significantly for films deposited on SnO2:F/glass subjected to high temperature (T) annealing (>750 °C). Strong correlation was found between photogenerated current, donor concentration, and Sn concentration as determined by Mott-Schottky analysis and X-ray photoelectron spectroscopy. The effects of thermal annealing and Sn addition in the resulting microstructure and optical properties of hematite films deposited on fused silica substrates were determined by a combination of structural characterization techniques and spectroscopic ellipsometry. Thermal annealing (>600 °C) induces a higher optical absorption that is associated directly to film densification and grain growth; however, it promotes no changes in the energy positions of the main Fe2O3 electronic transitions. The band gap energy was found to be 2.21 eV and independent of microstructure and of Sn concentration for all studied films. On the other hand, Sn can be incorporated in the Fe2O3 lattice for concentration up to Sn/Fe ˜2%, leading to an increase in energy split of the main absorption peak, attributed to a distortion of the Fe2O3 lattice. For higher concentrations, Sn incorporation leads to a reduction in absorption, associated with higher porosity and the formation of a secondary Sn-rich phase. In summary, the variation in the optical properties induced by thermal annealing and Sn addition cannot account for the order of magnitude increase of the current density generated by photoanodes annealed at high T (>750 °C); thus, it is concluded that the major contribution for the enhanced PEC performance comes from improved electronic properties induced by the n-type doping caused by Sn diffusion from the SnO2:F substrate.

  18. Dynamic adsorption of monoclonal antibody layers on hydrophilic silica surface: a combined study by spectroscopic ellipsometry and AFM.

    PubMed

    Wang, Xiaoqiang; Wang, Yuming; Xu, Hai; Shan, Honghong; Lu, Jian R

    2008-07-01

    Spectroscopic ellipsometry (SE) and atomic force microscopy (AFM) have been used to investigate the adsorption of a mouse monoclonal antibody (type IgG1, anti-beta-hCG) on hydrophilic silica (bearing weak negative charges above pH 3), followed by the assessment of binding of human chorionic gonadotrophin (hCG). The antibody is a relatively large molecule with a molecular weight of 150 kDa and the isoelectric point (IP) around pH 6. The antibody adsorption was conducted at pH 4.0, 6.0 and 8.0 to examine the role of charge interaction. Ellipsometric results show that away from the IP, both initial adsorption rate and surface excess decreased, with the reduction at pH 8.0 being more pronounced than that at pH 4.0 due to the electrostatic repulsion not only between the charged antibody molecules within the adsorbed layer but also between antibody and the silica surface. Whilst parallel AFM measurements confirmed the main trend of pH dependent antibody adsorption, they also revealed the tendency of surface aggregation with increasing surface coverage. AFM height profiling at low surface coverage confirmed the "flat-on" orientation of adsorbed antibody molecules, consistent with the previous study by neutron reflection. Interestingly, the antibody height at pH 4.0 was found to be lower than that at pH 8.0, showing the influence from different electrostatic interactions under the two pH conditions. Subsequent hCG binding to the adsorbed antibodies was found to decrease with increasing surface coverage due to the steric hindrance. Under similar antibody surface coverage, the hCG binding ratio at pH 8 was higher than that at pH 4.0, a difference that could only be accounted for by the tighter surface confinement at pH 4.0.

  19. Influence of annealing temperature and Sn doping on the optical properties of hematite thin films determined by spectroscopic ellipsometry

    SciTech Connect

    Souza, Lígia P. de; Chaves, Rodrigo O. G.; Malachias, Angelo; Paniago, Roberto; Ferlauto, Andre S.; Ferreira, Sukarno O.

    2016-06-28

    Hematite (α-Fe{sub 2}O{sub 3}) thin films were prepared by sol-gel route and investigated for application in H{sub 2} generation by photo-assisted water splitting. The photoelectrochemical (PEC) performance was shown to increase significantly for films deposited on SnO{sub 2}:F/glass subjected to high temperature (T) annealing (>750 °C). Strong correlation was found between photogenerated current, donor concentration, and Sn concentration as determined by Mott-Schottky analysis and X-ray photoelectron spectroscopy. The effects of thermal annealing and Sn addition in the resulting microstructure and optical properties of hematite films deposited on fused silica substrates were determined by a combination of structural characterization techniques and spectroscopic ellipsometry. Thermal annealing (>600 °C) induces a higher optical absorption that is associated directly to film densification and grain growth; however, it promotes no changes in the energy positions of the main Fe{sub 2}O{sub 3} electronic transitions. The band gap energy was found to be 2.21 eV and independent of microstructure and of Sn concentration for all studied films. On the other hand, Sn can be incorporated in the Fe{sub 2}O{sub 3} lattice for concentration up to Sn/Fe ∼2%, leading to an increase in energy split of the main absorption peak, attributed to a distortion of the Fe{sub 2}O{sub 3} lattice. For higher concentrations, Sn incorporation leads to a reduction in absorption, associated with higher porosity and the formation of a secondary Sn-rich phase. In summary, the variation in the optical properties induced by thermal annealing and Sn addition cannot account for the order of magnitude increase of the current density generated by photoanodes annealed at high T (>750 °C); thus, it is concluded that the major contribution for the enhanced PEC performance comes from improved electronic properties induced by the n-type doping caused by Sn diffusion from the SnO{sub 2}:F

  20. Dielectric functions and carrier concentrations of Hg{sub 1−x}Cd{sub x}Se films determined by spectroscopic ellipsometry

    SciTech Connect

    Lee, A. J.; Peiris, F. C.; Brill, G.; Doyle, K.; Myers, T. H.

    2015-08-17

    Spectroscopic ellipsometry, ranging from 35 meV to 6 eV, was used to determine the dielectric functions of a series of molecular beam epitaxy-grown Hg{sub 1−x}Cd{sub x}Se thin films deposited on both ZnTe/Si(112) and GaSb(112) substrates. The fundamental band gap as well as two higher-order electronic transitions blue-shift with increasing Cd composition in Hg{sub 1−x}Cd{sub x}Se, as expected. Representing the free carrier absorption with a Drude oscillator, we found that the effective masses of Hg{sub 1−x}Cd{sub x}Se (grown on ZnTe/Si) vary between 0.028 and 0.050 times the free electron mass, calculated using the values of carrier concentration and the mobility obtained through Hall measurements. Using these effective masses, we determined the carrier concentrations of Hg{sub 1−x}Cd{sub x}Se samples grown on GaSb, which is of significance as films grown on such doped-substrates posit ambiguous results when measured by conventional Hall experiments. These models can serve as a basis for monitoring Cd-composition during sample growth through in-situ spectroscopic ellipsometry.

  1. Investigation of Bovine Serum Albumin (BSA) Attachment onto Self-Assembled Monolayers (SAMs) Using Combinatorial Quartz Crystal Microbalance with Dissipation (QCM-D) and Spectroscopic Ellipsometry (SE).

    PubMed

    Phan, Hanh T M; Bartelt-Hunt, Shannon; Rodenhausen, Keith B; Schubert, Mathias; Bartz, Jason C

    2015-01-01

    Understanding protein adsorption kinetics to surfaces is of importance for various environmental and biomedical applications. Adsorption of bovine serum albumin to various self-assembled monolayer surfaces including neutral and charged hydrophilic and hydrophobic surfaces was investigated using in-situ combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry. Adsorption of bovine serum albumin varied as a function of surface properties, bovine serum albumin concentration and pH value. Charged surfaces exhibited a greater quantity of bovine serum albumin adsorption, a larger bovine serum albumin layer thickness, and increased density of bovine serum albumin protein compared to neutral surfaces at neutral pH value. The quantity of adsorbed bovine serum albumin protein increased with increasing bovine serum albumin concentration. After equilibrium sorption was reached at pH 7.0, desorption of bovine serum albumin occurred when pH was lowered to 2.0, which is below the isoelectric point of bovine serum albumin. Our data provide further evidence that combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry is a sensitive analytical tool to evaluate attachment and detachment of adsorbed proteins in systems with environmental implications.

  2. Investigation of Bovine Serum Albumin (BSA) Attachment onto Self-Assembled Monolayers (SAMs) Using Combinatorial Quartz Crystal Microbalance with Dissipation (QCM-D) and Spectroscopic Ellipsometry (SE)

    PubMed Central

    Phan, Hanh T. M.; Bartelt-Hunt, Shannon; Rodenhausen, Keith B.; Schubert, Mathias; Bartz, Jason C.

    2015-01-01

    Understanding protein adsorption kinetics to surfaces is of importance for various environmental and biomedical applications. Adsorption of bovine serum albumin to various self-assembled monolayer surfaces including neutral and charged hydrophilic and hydrophobic surfaces was investigated using in-situ combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry. Adsorption of bovine serum albumin varied as a function of surface properties, bovine serum albumin concentration and pH value. Charged surfaces exhibited a greater quantity of bovine serum albumin adsorption, a larger bovine serum albumin layer thickness, and increased density of bovine serum albumin protein compared to neutral surfaces at neutral pH value. The quantity of adsorbed bovine serum albumin protein increased with increasing bovine serum albumin concentration. After equilibrium sorption was reached at pH 7.0, desorption of bovine serum albumin occurred when pH was lowered to 2.0, which is below the isoelectric point of bovine serum albumin. Our data provide further evidence that combinatorial quartz crystal microbalance with dissipation and spectroscopic ellipsometry is a sensitive analytical tool to evaluate attachment and detachment of adsorbed proteins in systems with environmental implications. PMID:26505481

  3. High-Definition Infrared Spectroscopic Imaging

    PubMed Central

    Reddy, Rohith K.; Walsh, Michael J.; Schulmerich, Matthew V.; Carney, P. Scott; Bhargava, Rohit

    2013-01-01

    The quality of images from an infrared (IR) microscope has traditionally been limited by considerations of throughput and signal-to-noise ratio (SNR). An understanding of the achievable quality as a function of instrument parameters, from first principals is needed for improved instrument design. Here, we first present a model for light propagation through an IR spectroscopic imaging system based on scalar wave theory. The model analytically describes the propagation of light along the entire beam path from the source to the detector. The effect of various optical elements and the sample in the microscope is understood in terms of the accessible spatial frequencies by using a Fourier optics approach and simulations are conducted to gain insights into spectroscopic image formation. The optimal pixel size at the sample plane is calculated and shown much smaller than that in current mid-IR microscopy systems. A commercial imaging system is modified, and experimental data are presented to demonstrate the validity of the developed model. Building on this validated theoretical foundation, an optimal sampling configuration is set up. Acquired data were of high spatial quality but, as expected, of poorer SNR. Signal processing approaches were implemented to improve the spectral SNR. The resulting data demonstrated the ability to perform high-definition IR imaging in the laboratory by using minimally-modified commercial instruments. PMID:23317676

  4. Infrared Spectroscopic Imaging: The Next Generation

    PubMed Central

    Bhargava, Rohit

    2013-01-01

    Infrared (IR) spectroscopic imaging seemingly matured as a technology in the mid-2000s, with commercially successful instrumentation and reports in numerous applications. Recent developments, however, have transformed our understanding of the recorded data, provided capability for new instrumentation, and greatly enhanced the ability to extract more useful information in less time. These developments are summarized here in three broad areas— data recording, interpretation of recorded data, and information extraction—and their critical review is employed to project emerging trends. Overall, the convergence of selected components from hardware, theory, algorithms, and applications is one trend. Instead of similar, general-purpose instrumentation, another trend is likely to be diverse and application-targeted designs of instrumentation driven by emerging component technologies. The recent renaissance in both fundamental science and instrumentation will likely spur investigations at the confluence of conventional spectroscopic analyses and optical physics for improved data interpretation. While chemometrics has dominated data processing, a trend will likely lie in the development of signal processing algorithms to optimally extract spectral and spatial information prior to conventional chemometric analyses. Finally, the sum of these recent advances is likely to provide unprecedented capability in measurement and scientific insight, which will present new opportunities for the applied spectroscopist. PMID:23031693

  5. High-definition infrared spectroscopic imaging.

    PubMed

    Reddy, Rohith K; Walsh, Michael J; Schulmerich, Matthew V; Carney, P Scott; Bhargava, Rohit

    2013-01-01

    The quality of images from an infrared (IR) microscope has traditionally been limited by considerations of throughput and signal-to-noise ratio (SNR). An understanding of the achievable quality as a function of instrument parameters, from first principals is needed for improved instrument design. Here, we first present a model for light propagation through an IR spectroscopic imaging system based on scalar wave theory. The model analytically describes the propagation of light along the entire beam path from the source to the detector. The effect of various optical elements and the sample in the microscope is understood in terms of the accessible spatial frequencies by using a Fourier optics approach and simulations are conducted to gain insights into spectroscopic image formation. The optimal pixel size at the sample plane is calculated and shown much smaller than that in current mid-IR microscopy systems. A commercial imaging system is modified, and experimental data are presented to demonstrate the validity of the developed model. Building on this validated theoretical foundation, an optimal sampling configuration is set up. Acquired data were of high spatial quality but, as expected, of poorer SNR. Signal processing approaches were implemented to improve the spectral SNR. The resulting data demonstrated the ability to perform high-definition IR imaging in the laboratory by using minimally-modified commercial instruments.

  6. Spectroscopic data for thermal infrared remote sensing

    NASA Technical Reports Server (NTRS)

    Varanasi, P.; Nemtchinov, V.; Li, Z.

    1995-01-01

    There has been extensive world-wide use of chloro-fluoro-carbons (CFC's), especially CFC-11 (CFCl3) and CFC-12 (CF2Cl2), hydro-chloro-fluoro-carbons (HCFC's), HCFC-22 (CHFCl2) in particular, and sulphur hexaflouride (SF6) in numerous many industrial applications. These chemicals possess either a strong ozone-depletion potential or a global-warming potential, or both, and pose a threat to the inhabitability of our planet. Recognition of this fact has led to significant curtailment, if not total banishment, of their use globally. However, as recent satellite observations have shown, decline in their atmospheric concentrations may not be immediate. The marked depletion of ozone which has been observed in recent years at high latitudes has made infrared remote sensing of the atmosphere an activity of high priority. The success of any infrared remote sensing experiment conducted in the atmosphere depends upon the availability of accurate, high-resolution, spectroscopic data that are applicable to that experiment. This paper presents a preliminary phase of a multi-faceted work using a Fourier-transform spectrometer (FTS) which is in progress in our laboratory. The concept of how laboratory-borne measurements can be geared toward obtaining a database that is directly applicable to satellite-borne remote sensing missions is the main thrust of this paper which addresses itself to ongoing or planned international space missions. Spectroscopic data on the unresolvable bands of the above mentioned as well as several other man-made gases and on the individual spectral lines of such naturally present trace gases as CO2, N2O, NH3, and CH4 are presented. There is often significant overlap between the isolated lines of better known bands of the more abundant species and the weaker absorption features identifiable as bands of the currently less abundant CFC's, HCFC's, and SF6.

  7. Infrared laser spectroscopic trace gas sensing

    NASA Astrophysics Data System (ADS)

    Sigrist, Markus

    2016-04-01

    Chemical sensing and analyses of gas samples by laser spectroscopic methods are attractive owing to several advantages such as high sensitivity and specificity, large dynamic range, multi-component capability, and lack of pretreatment or preconcentration procedures. The preferred wavelength range comprises the fundamental molecular absorption range in the mid-infared between 3 and 15 μm, whereas the near-infrared range covers the (10-100 times weaker) higher harmonics and combination bands. The availability of near-infrared and, particularly, of broadly tunable mid-infrared sources like external cavity quantum cascade lasers (EC-QCLs), interband cascade lasers (ICLs), difference frequency generation (DFG), optical parametric oscillators (OPOs), recent developments of diode-pumped lead salt semiconductor lasers, of supercontinuum sources or of frequency combs have eased the implementation of laser-based sensing devices. Sensitive techniques for molecular absorption measurements include multipass absorption, various configurations of cavity-enhanced techniques such as cavity ringdown (CRD), or of photoacoustic spectroscopy (PAS) including quartz-enhanced (QEPAS) or cantilever-enhanced (CEPAS) techniques. The application requirements finally determine the optimum selection of laser source and detection scheme. In this tutorial talk I shall discuss the basic principles, present various experimental setups and illustrate the performance of selected systems for chemical sensing of selected key atmospheric species. Applications include an early example of continuous vehicle emission measurements with a mobile CO2-laser PAS system [1]. The fast analysis of C1-C4 alkanes at sub-ppm concentrations in gas mixtures is of great interest for the petrochemical industry and was recently achieved with a new type of mid-infrared diode-pumped piezoelectrically tuned lead salt vertical external cavity surface emitting laser (VECSEL) [2]. Another example concerns measurements on short

  8. Measurement of InAsSb bandgap energy and InAs/InAsSb band edge positions using spectroscopic ellipsometry and photoluminescence spectroscopy

    SciTech Connect

    Webster, P. T.; Riordan, N. A.; Liu, S.; Zhang, Y.-H.; Johnson, S. R.; Steenbergen, E. H.

    2015-12-28

    The structural and optical properties of lattice-matched InAs{sub 0.911}Sb{sub 0.089} bulk layers and strain-balanced InAs/InAs{sub 1−x}Sb{sub x} (x ∼ 0.1–0.4) superlattices grown on (100)-oriented GaSb substrates by molecular beam epitaxy are examined using X-ray diffraction, spectroscopic ellipsometry, and temperature dependent photoluminescence spectroscopy. The photoluminescence and ellipsometry measurements determine the ground state bandgap energy and the X-ray diffraction measurements determine the layer thickness and mole fraction of the structures studied. Detailed modeling of the X-ray diffraction data is employed to quantify unintentional incorporation of approximately 1% Sb into the InAs layers of the superlattices. A Kronig-Penney model of the superlattice miniband structure is used to analyze the valence band offset between InAs and InAsSb, and hence the InAsSb band edge positions at each mole fraction. The resulting composition dependence of the bandgap energy and band edge positions of InAsSb are described using the bandgap bowing model; the respective low and room temperature bowing parameters for bulk InAsSb are 938 and 750 meV for the bandgap, 558 and 383 meV for the conduction band, and −380 and −367 meV for the valence band.

  9. Optical and electrical properties of Sn-doped ZnO thin films studied via spectroscopic ellipsometry and hall effect measurements

    NASA Astrophysics Data System (ADS)

    So, Hyeon Seob; Hwang, Sang Bin; Jung, Dae Ho; Lee, Hosun

    2017-04-01

    We investigated the optical and the electrical properties of Sn-doped ZnO thin films grown via RF co-sputtering deposition methods at room temperature. Through annealing, the carrier concentrations and mobilities were improved. The ellipsometric angles, Ψ and Δ, of the ZnO:Sn thin films were measured via spectroscopic ellipsometry. Dielectric functions were obtained from the ellipsometric angles by using the Drude and the parametric optical constant models. With an increase in the Sn doping concentration, the Drude model amplitude increased substantially. The Urbach and the optical gap energies of the ZnO:Sn films were determined using the dielectric functions. The carrier concentrations and the mobilities of the ZnO:Sn thin films were measured using Hall-effect measurements. The effective mass of ZnO:Sn was estimated to be 0.274m0, assuming that the carrier concentrations measured via ellipsometry and Hall-effect measurements were the same. A shift in the optical gap energy of the Sn-doped ZnO was found to be due to a combination of the Burstein-Moss effect, electron-electron interactions, and electron-impurity scattering. The discrepancy between the measured and the calculated shifts in the optical gap energy is attributed to Sn-alloying effects.

  10. Water content of hydrated polymer brushes measured by an in situ combination of a quartz crystal microbalance with dissipation monitoring and spectroscopic ellipsometry.

    PubMed

    Ramos, Jagoba J Iturri; Moya, Sergio E

    2011-12-15

    Poly(methacryloyloxy ethyltrimethylammonium chloride) (PMETAC), poly(sulfopropylmethacrylate potassium salt), or poly(N-isopropyl acrylamide) (PNIPAM) brushes are synthesized by means of the atom transfer radical polymerization technique from gold surfaces coated with a monolayer of the initiator ω-mercaptoundecyl bromo isobutyrate. The brush growth is followed in situ and in real time by the combination of quartz crystal microbalance with dissipation technique (QCM-D) and spectroscopic ellipsometry in a single device. The combination of QCM-D and ellipsometry allows for the simultaneous determination of both the acoustic mass, macous, comprising the mass of the polymer and the solvent, and the optical mass, mopt, which corresponds to the polymer mass alone. Brush hydration is calculated from the difference between the values obtained for macous and mopt for each polymer synthesized. Brush hydration is then used to quantify the percentage of water released in the brush during collapse; a 30-40% release of water for PMETAC and PSPM brushes in 1 M NaCl and 80% for PNIPAM brushes when the temperature is increased to values above the lower critical solution temperature is observed.

  11. New infrared spectroscopic database for bromine nitrate

    NASA Astrophysics Data System (ADS)

    Wagner, Georg; Birk, Manfred

    2016-08-01

    Fourier transform infrared measurements of bromine nitrate have been performed in the spectral region 675-1400 cm-1 at 0.014 cm-1 spectral resolution. Absorption cross sections were derived from 38 spectra covering the temperature range from 203 to 296 K and air pressure range from 0 to 190 mbar. For line-by-line analysis, further spectra were recorded at 0.00094 cm-1 spectral resolution at 223 and 293 K. The sample was synthesized from ClONO2 and Br2. Band strengths of the bands ν3 around 803 cm-1 and ν2 around 1286 cm-1 were determined from three pure BrONO2 measurements at different temperatures and pressures. Number densities in the absorption cell were derived from pressure measurements of the purified sample taking into account small amounts of impurities determined spectroscopically. Resulting band strengths are Sν3 = 2.872(52) × 10-17 cm2 molec-1 cm-1 and Sν2 = 3.63(15) × 10-17 cm2 molec-1 cm-1. Absorption cross sections of all measurements were scaled to these band strengths. Further data reduction was achieved with an interpolation scheme based on two-dimensional polynomials in ln(pressure) and temperature. The database is well-suited for remote-sensing application and should reduce the atmospheric bromine nitrate error budget substantially.

  12. Evaluation of thickness and strain of thin planar layers of InAs on GaAs(001) using spectroscopic ellipsometry

    SciTech Connect

    Eyink, K. G.; Szmulowicz, F.; Esposito, D.; Grazulis, L.; Hill, M.; Mahalingam, K.; Aronow, A. J.

    2014-07-21

    We develop a technique for accurately measuring thickness of planar InAs films grown on (001) GaAs by spectroscopic ellipsometry, using bulk optical constants. We observe that the critical point structure for the E{sub 1} and E{sub 1} + Δ{sub 1} transitions extracted from the measured dielectric properties varies with strain in the layer. Transmission electron microscopy confirms the extracted thickness and measures the residual strain based on the dislocation spacing in the film. At small thickness, the E{sub 1} critical point is seen to markedly deviate from the dependence predicted by deformation potential theory and appears to be consistent with additional quantum confinement effects.

  13. A new simple tubular flow cell for use with variable angle spectroscopic ellipsometry: A high throughput in situ protein adsorption study

    NASA Astrophysics Data System (ADS)

    Byrne, T. M.; Trussler, S.; McArthur, M. A.; Lohstreter, L. B.; Bai, Zhijun; Filiaggi, M. J.; Dahn, J. R.

    2009-09-01

    A simple and novel flow cell design is presented here for use with variable angle spectroscopic ellipsometry (VASE) to study the adsorption of liquid-borne species on reflective surfaces. The flow cell allows a sample as large as 6 mm × 75 mm to be probed point by point and at any common ellipsometric angle of incidence, unlike other designs. Using our flow cell system with VASE, combinatorial films of Al 1-xNb x, Al 1-xTa x, and Al 1-xTi x (0 ⩽ x ⩽ 1) were tested in situ for fibrinogen affinity along their 75 mm long compositional gradients. Fibrinogen adsorption on the films was found to be closely correlated to the various surface oxide fractions, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen for each binary library. Adsorbed amounts measured in situ were in agreement with previously obtained values found using ex situ techniques.

  14. Spectroscopic ellipsometry on Si/SiO{sub 2}/graphene tri-layer system exposed to downstream hydrogen plasma: Effects of hydrogenation and chemical sputtering

    SciTech Connect

    Eren, Baran; Fu, Wangyang; Marot, Laurent Calame, Michel; Steiner, Roland; Meyer, Ernst

    2015-01-05

    In this work, the optical response of graphene to hydrogen plasma treatment is investigated with spectroscopic ellipsometry measurements. Although the electronic transport properties and Raman spectrum of graphene change after plasma hydrogenation, ellipsometric parameters of the Si/SiO2/graphene tri-layer system do not change. This is attributed to plasma hydrogenated graphene still being electrically conductive, since the light absorption of conducting 2D materials does not depend on the electronic band structure. A change in the light transmission can only be observed when higher energy hydrogen ions (30 eV) are employed, which chemically sputter the graphene layer. An optical contrast is still apparent after sputtering due to the remaining traces of graphene and hydrocarbons on the surface. In brief, plasma treatment does not change the light transmission of graphene; and when it does, this is actually due to plasma damage rather than plasma hydrogenation.

  15. Optical Properties of Jet-Vapor-Deposited TiAlO and HfAlO Determined by Vacuum Utraviolet Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Nguyen, N. V.; Han, Jin-Ping; Kim, Jin Yong; Wilcox, Eva; Cho, Yong Jai; Zhu, Wenjuan; Luo, Zhijiong; Ma, T. P.

    2003-09-01

    In this report we use vacuum ultraviolet spectroscopic ellipsometry (VUV-SE) to determine the optical as well as structural properties of high-k metal oxides, in particular, of hafnium aluminates and titanium aluminates grown by jet-vapor deposition. In our opinion, the adapted approach employed in this study can be applied in most other high-k dielectric thin films which are of great interest in developing a new material replacement for the SiO2 gate dielectric in CMOS and other IC devices. Specifically, VUV spectroscopic ellipsometry measurements were performed on a commercial ellipsometer with spectral range from 1.0 eV (1240 nm) to 8.7 eV (143 nm). The Generalized Tauc-Lorentz (GTL) dispersion was used to determine the dielectric functions of these films. An ellipsometric model consisting of two layers of different film densities was found to be in excellent agreement with the experimental data. For the TiAlO films, only one film was needed in the model to fit the data. The optical bandgaps are seen to increase, while the relative film densities decrease, with increasing Al in the films. In addition, the optical dielectric functions shift to higher energy and decrease in magnitude as the films become more insulating. As a result, the Al appears to be mixed at the atomic level instead of forming a phase separation between HfO2 and Al2O3. For TiAlO, we observed similar results except that the fundamental optical bandgap was not strongly affected by the amount of Al incorporated in the films. In our opinion, the adapted approach employed in this study can be applied in most other high-k dielectric thin films which are of great interest in developing a new material replacement for SiO2 in CMOS and other IC devices.

  16. Infrared Spectroscopic Imaging of Latent Fingerprints and Associated Forensic Evidence

    PubMed Central

    Chen, Tsoching; Schultz, Zachary D.; Levin, Ira W.

    2011-01-01

    Fingerprints reflecting a specific chemical history, such as exposure to explosives, are clearly distinguished from overlapping, and interfering latent fingerprints using infrared spectroscopic imaging techniques and multivariate analysis. PMID:19684917

  17. Infrared spectroscopic imaging microscopy: Applications to biological systems

    SciTech Connect

    Kidder, Linda H.; Levin, Ira W.; Lewis, E. Neil

    1998-06-01

    The coupling of imaging modalities with spectroscopic techniques adds additional dimensions to sample analysis in both the spectroscopic and spatial domains. The particular ability of infrared (IR) imaging to explore the spatial distribution of chemically distinct species on length scales ranging from microns to kilometers demonstrates the versatility and diversity of spectroscopic imaging. In this paper, we focus on the further development of our Fourier-transform (FT) based mid-IR spectroscopic imaging technique which combines the analytical capabilities of mid-IR spectroscopy with the morphological information obtained from optical imaging. The seamless combination of spectroscopy for molecular analysis with the power of visualization represents the future of infrared microscopy. Our spectroscopic imaging instrument integrates several infrared focal-plane arrays with a Michelson step-scan interferometer, generating high-fidelity and high spectral resolution mid-infrared spectroscopic images. The instrumentation produces multidimensional, chemically specific images, while simultaneously obtaining high resolution spectra for each detector pixel. The spatial resolution of the images approaches the diffraction limit for mid-infrared wavelengths, while the spectral resolution is determined by the interferometer, and can be 4 cm{sup -1} or higher. Data derived from a variety of materials, particularly biological samples, illustrate the capabilities of the technique for readily visualizing chemical complexity and for providing statistical data on sample heterogeneity.

  18. Infrared spectroscopy and spectroscopic imaging in forensic science.

    PubMed

    Ewing, Andrew V; Kazarian, Sergei G

    2017-01-16

    Infrared spectroscopy and spectroscopic imaging, are robust, label free and inherently non-destructive methods with a high chemical specificity and sensitivity that are frequently employed in forensic science research and practices. This review aims to discuss the applications and recent developments of these methodologies in this field. Furthermore, the use of recently emerged Fourier transform infrared (FT-IR) spectroscopic imaging in transmission, external reflection and Attenuated Total Reflection (ATR) modes are summarised with relevance and potential for forensic science applications. This spectroscopic imaging approach provides the opportunity to obtain the chemical composition of fingermarks and information about possible contaminants deposited at a crime scene. Research that demonstrates the great potential of these techniques for analysis of fingerprint residues, explosive materials and counterfeit drugs will be reviewed. The implications of this research for the examination of different materials are considered, along with an outlook of possible future research avenues for the application of vibrational spectroscopic methods to the analysis of forensic samples.

  19. Spectroscopic Ellipsometry Studies of Thin Film a-Si:H Solar Cell Fabrication by Multichamber Deposition in the n-i-p Substrate Configuration

    NASA Astrophysics Data System (ADS)

    Dahal, Lila Raj

    Real time spectroscopic ellipsometry (RTSE), and ex-situ mapping spectroscopic ellipsometry (SE) are powerful characterization techniques capable of performance optimization and scale-up evaluation of thin film solar cells used in various photovoltaics technologies. These non-invasive optical probes employ multichannel spectral detection for high speed and provide high precision parameters that describe (i) thin film structure, such as layer thicknesses, and (ii) thin film optical properties, such as oscillator variables in analytical expressions for the complex dielectric function. These parameters are critical for evaluating the electronic performance of materials in thin film solar cells and also can be used as inputs for simulating their multilayer optical performance. In this Thesis, the component layers of thin film hydrogenated silicon (Si:H) solar cells in the n-i-p or substrate configuration on rigid and flexible substrate materials have been studied by RTSE and ex-situ mapping SE. Depositions were performed by magnetron sputtering for the metal and transparent conducting oxide contacts and by plasma enhanced chemical vapor deposition (PECVD) for the semiconductor doped contacts and intrinsic absorber layers. The motivations are first to optimize the thin film Si:H solar cell in n-i-p substrate configuration for single-junction small-area dot cells and ultimately to scale-up the optimized process to larger areas with minimum loss in device performance. Deposition phase diagrams for both i- and p -layers on 2" x 2" rigid borosilicate glass substrate were developed as functions of the hydrogen-to-silane flow ratio in PECVD. These phase diagrams were correlated with the performance parameters of the corresponding solar cells, fabricated in the Cr/Ag/ZnO/n/i/ p/ITO structure. In both cases, optimization was achieved when the layers were deposited in the protocrystalline phase. Identical solar cell structures were fabricated on 6" x 6" borosilicate glass with

  20. In situ real-time studies of oxygen incorporation in complex oxide thin films using spectroscopic ellipsometry and ion scattering and recoil spectrometry

    SciTech Connect

    Mueller, A. H.; Gao, Y.; Irene, E. A.; Auciello, O.; Krauss, A. R.; Achultz, J. A.

    2000-05-25

    The surface termination of c-axis oriented YBa{sub 2}Cu{sub 3}O{sub 7{minus}{delta}} (YBCO) and the oxygen incorporation mechanism has been investigated using a unique combination of spectroscopic ellipsometry (SE) and time of flight ion scattering and recoil spectrometry (ToF-ISARS). The high surface sensitivity of the ToF-ISARS technique combined with the bulk oxygen sensitivity of SE are shown to yield complimentary information. The SE provided the film orientation and quality, while ToF-ISARS supplied surface compositional and structural information and enabled isotopic {sup 18}O tracer studies. It was determined that the O content of the film had little effect on the surface termination of the film, indicating a lack of labile Cu(1) sites at the c-axis oriented YBCO surface. Also, strong evidence for a Ba or BaO terminated structure is shown. The data related to the {sup 18}O tracer studies indicate that O from the reaction ambient incorporates only into the labile Cu(1) sites during both deposition and annealing, while stable O sites were populated with O from the sputtered target, indicating either the need for sputtered atomic O or sputtered YCuO complexes to occupy the stable Cu(2) sites.

  1. Dielectric functions of solution-processed GdAlO(x)/Si films measured with vacuum ultra-violet spectroscopic ellipsometry.

    PubMed

    Kim, Tae Jung; Park, Han Gyeol; Lee, Sang Hyub; Hwang, Soo Min; Hwang, Soon Yong; Kim, Jun Young; Choi, Junho; Kang, Yu Ri; Kim, Young Dong; Joo, Jinho

    2014-11-01

    The dielectric functions of amorphous GdAlO(x) (GAO) films grown by the sol-gel process were investigated from 1.12 to 8.5 eV as a function of annealing temperature using spectroscopic ellipsometry (SE). A GAO precursor sol with a molar ratio of Gd:Al = 1:1 was prepared. Thin layers were formed by spin-coating on p-type Si substrates. The layers were sintered at 400 degrees C for 2 h in an ambient atmosphere, then rapid-thermal-annealed (RTA) at 700 or 800 degrees C for 1 min in an N2 ambient. The optical properties were measured via variable angle SE, at room temperature. The angle of incidence was varied from 50 to 70 degrees in 10 degrees steps. The dielectric functions of the resulting GAO films were obtained from the measured pseudodielectric functions by multilayer-structure calculations using the Tauc-Lorentz (TL) dispersion relation. The real and imaginary parts of the dielectric functions were found to increase with increasing RTA temperature. The film thicknesses and TL parameters (threshold energy E(g) and broadening C) decrease with increasing RTA temperature.

  2. Optical properties of Au-TiO2 and Au-SiO2 granular metal thin films studied by Spectroscopic Ellipsometry

    NASA Astrophysics Data System (ADS)

    Bakkali, H.; Blanco, E.; Dominguez, M.; de la Mora, M. B.; Sánchez-Aké, C.; Villagrán-Muniz, M.

    2017-05-01

    We report on the optical properties in the dielectric regime of gold nanostructured granular thin films fabricated through sputter deposition with a composite target at room temperature and over a wide photon energy range (0.62-4.13 eV) by means of Spectroscopic Ellipsometry. The thickness and the films effective optical constants are successfully determined using an approach based on multiple Gaussian oscillators. In the quasi-static regime, i.e., 2R ≪ λ, and in the dipole approximation, examining the real and imaginary parts, ε1, ε2, of the dielectric function, it is shown that the dc optical conductivity is almost negligible (σ = ωε0ε2 ≪ 10-5 Ω cm-1) and only the capacitive contribution holds for the electron-phonon relaxation in localized surface plasmon of the gold particles. Furthermore, we find that the resonant frequencies ωp becomes red-shifted when the particles are electromagnetically coupled to each other or when the surrounding medium dielectric constant, εm, increases, thus exhibiting a wide spectral tuning range of 1.95-2.24 eV.

  3. Sensitivity analysis and line edge roughness determination of 28-nm pitch silicon fins using Mueller matrix spectroscopic ellipsometry-based optical critical dimension metrology

    NASA Astrophysics Data System (ADS)

    Dixit, Dhairya; O'Mullane, Samuel; Sunkoju, Sravan; Gottipati, Abhishek; Hosler, Erik R.; Kamineni, Vimal; Preil, Moshe; Keller, Nick; Race, Joseph; Muthinti, Gangadhara Raja; Diebold, Alain C.

    2015-07-01

    Measurement and control of line edge roughness (LER) is one of the most challenging issues facing patterning technology. As the critical dimensions (CDs) of patterned structures decrease, an LER of only a few nanometers negatively impacts device performance. Here, Mueller matrix (MM) spectroscopic ellipsometry-based scatterometry is used to characterize LER in periodic line-space structures in 28-nm pitch Si fin samples fabricated by directed self-assembly patterning. The optical response of the MM elements is influenced by structural parameters like pitch, CDs, height, and side-wall angle, as well as the optical properties of the materials. Evaluation and decoupling MM element response to LER from other structural parameters requires sensitivity analysis using scatterometry models that include LER. Here, an approach is developed that can be used to characterize LER in Si fins by comparing the optical responses generated by systematically varying the grating shape and measurement conditions. Finally, the validity of this approach is established by comparing the results obtained from power spectral density analysis of top down scanning electron microscope images and cross-sectional transmission electron microscope image of the 28-nm pitch Si fins.

  4. Effects of oxygen partial pressure, deposition temperature, and annealing on the optical response of CdS:O thin films as studied by spectroscopic ellipsometry

    SciTech Connect

    Junda, Maxwell M.; Grice, Corey R.; Subedi, Indra; Yan, Yanfa; Podraza, Nikolas J.

    2016-07-07

    Ex-situ spectroscopic ellipsometry measurements are made on radio frequency magnetron sputtered oxygenated cadmium sulfide (CdS:O) thin films. Films are deposited onto glass substrates at room temperature and at 270 °C with varying oxygen to total gas flow ratios in the sputtering ambient. Ellipsometric spectra from 0.74 to 5.89 eV are collected before and after annealing at 607 °C to simulate the thermal processes during close-space sublimation of overlying cadmium telluride in that solar cell configuration. Complex dielectric function (ε = ε{sub 1} + iε{sub 2}) spectra are extracted for films as a function of oxygen gas flow ratio, deposition temperature, and post-deposition annealing using a parametric model accounting for critical point transitions and an Urbach tail for sub-band gap absorption. The results suggest an inverse relationship between degree of crystallinity and oxygen gas flow ratio, whereas annealing is shown to increase crystallinity in all samples. Direct band gap energies are determined from the parametric modeling of ε and linear extrapolations of the square of the absorption coefficient. As-deposited samples feature a range of band gap energies whereas annealing is shown to result in gap energies ranging only from 2.40 to 2.45 eV, which is close to typical band gaps for pure cadmium sulfide.

  5. Effects of oxygen partial pressure, deposition temperature, and annealing on the optical response of CdS:O thin films as studied by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Junda, Maxwell M.; Grice, Corey R.; Subedi, Indra; Yan, Yanfa; Podraza, Nikolas J.

    2016-07-01

    Ex-situ spectroscopic ellipsometry measurements are made on radio frequency magnetron sputtered oxygenated cadmium sulfide (CdS:O) thin films. Films are deposited onto glass substrates at room temperature and at 270 °C with varying oxygen to total gas flow ratios in the sputtering ambient. Ellipsometric spectra from 0.74 to 5.89 eV are collected before and after annealing at 607 °C to simulate the thermal processes during close-space sublimation of overlying cadmium telluride in that solar cell configuration. Complex dielectric function (ɛ = ɛ1 + iɛ2) spectra are extracted for films as a function of oxygen gas flow ratio, deposition temperature, and post-deposition annealing using a parametric model accounting for critical point transitions and an Urbach tail for sub-band gap absorption. The results suggest an inverse relationship between degree of crystallinity and oxygen gas flow ratio, whereas annealing is shown to increase crystallinity in all samples. Direct band gap energies are determined from the parametric modeling of ɛ and linear extrapolations of the square of the absorption coefficient. As-deposited samples feature a range of band gap energies whereas annealing is shown to result in gap energies ranging only from 2.40 to 2.45 eV, which is close to typical band gaps for pure cadmium sulfide.

  6. Detection of β-amyloid peptide (1-16) and amyloid precursor protein (APP770) using spectroscopic ellipsometry and QCM techniques: a step forward towards Alzheimers disease diagnostics.

    PubMed

    Mustafa, M K; Nabok, A; Parkinson, D; Tothill, I E; Salam, F; Tsargorodskaya, A

    2010-12-15

    A highly sensitive method of spectroscopic ellipsometry in total internal reflection mode (TIRE) was exploited for detecting β-amyloid peptide (Aβ(1-16)) in the direct immune reaction with monoclonal DE2 antibodies (raised against Aβ(1-16)) electrostatically immobilised on the surface of gold. A rapid detection of Aβ(1-16) in a wide range of concentrations from 5 μg/ml down to 0.05 ng/ml was achieved using a cost-effective and label-free direct immunoassay format. TIRE dynamic spectral measurements proved that the immune reaction between DE2 monoclonal antibodies and Aβ(1-16) is highly specific with the affinity constant K(D)=1.46×10(-8) mol/l. The same DE2 antibodies were utilised for detection of amyloid precursor protein APP(770), a larger protein containing Aβ(1-16) domain, using the quartz crystal microbalance (QCM) measurements in liquid. A combination of QCM and TIRE kinetics results allowed the evaluation of the originally unknown concentration of APP(770) in complete medium solution containing other proteins, salts, and amino acids.

  7. Spectroscopic ellipsometry and UV-vis studies at room temperature of the novel organic-inorganic hybrid of salt Bis (4-acetylanilinium) tetrachlorocadmiate

    NASA Astrophysics Data System (ADS)

    Jellibi, A.; Chaabane, I.; Guidara, K.

    2016-05-01

    The optical properties of Bis (4-acetylanilinium) tetrachlorocadmiate compound were studied using phase modulated spectroscopic ellipsometry (PMSE) and ultraviolet-visible (UV-Vis) spectroscopy in the range 200-800 nm. The optical absorbance were measured in order to deduce the absorption coefficient α and optical band gap Eg, thus the Tauc model was used to determine the optical gap energy of the synthesized (C8H10NO)2CdCl4 compound. The analysis of the data revealed the existence of optical allowed direct transition mechanisms with the band gap energy equal to 3.17 eV. On the other hand the single-effective-oscillator model was used to fit the calculated data to the experimental ellipsometric spectra. Thus the values of the dispersion energy and single-oscillator strength are determined. Also, the extinction coefficient, refractive index, dispersion parameter and both the real εr and imaginary parts εi of the dielectric permittivity of Bis (4-acetylanilinium) tetrachlorocadmiate compound were calculated and the results are discussed.

  8. Plasmon-exciton interaction and screening of exciton in ZnO-based thin film on bulk Pt as analyzed by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Darma, Yudi; Dimas Satrya, Christoforus; Marlina, Resti; Kurniawan, Robi; Herng, Tun Seng; Ding, Jun; Rusydi, Andrivo

    2017-01-01

    We study plasmon-exciton interaction in ZnO-based thin film on bulk Pt by using high resolution spectroscopic ellipsometry. ZnO films on quartz are used as reference. This study shows the strong electronic interactions between ZnO film and Pt by considering the significant suppression of exciton in ZnO film, in comparison to ZnO film on quartz. We found that plasmon in Pt are responsible to provide transferred electron for electronic blocking of exciton in ZnO film induce by spontaneous recombination from Pt. In the case of Cu doped ZnO film, we confirm screening effects on exciton and a localized interband transition for both systems (ZnO film on Pt and ZnO film on quartz). In Cu-doped ZnO film, electronic blocking of exciton by Pt plasmon is more pronounce rather than screening effect by interband transition. Our results show the importance of plasmon from substrate and doping to modify the optical properties of wide bandgap semiconductor.

  9. A high throughput approach to quantify protein adsorption on combinatorial metal/metal oxide surfaces using electron microprobe and spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Byrne, T.; Lohstreter, L.; Filiaggi, M. J.; Bai, Zhijun; Dahn, J. R.

    2008-09-01

    Although metallic biomaterials are widely used, systematic studies of protein adsorption onto such materials are generally lacking. Combinatorial binary films of Al 1-xTi x and Al 1-xNb x (0 ⩽ x ⩽ 1) and corresponding pure element films were produced on glass substrates using a unique magnetron sputtering technique. Fibrinogen and albumin adsorption amounts were measured by wavelength-dispersive spectroscopy (WDS) and spectroscopic ellipsometry (SE) equipment, both high throughput techniques with automated motion stage capabilities. X-ray diffraction revealed that the binary films have crystalline phases present near the ends of the compositional gradient with an amorphous region throughout the interior of the gradient. X-ray photoelectron spectroscopy provided the surface chemistry along the binary films and showed that Al 2O 3 preferentially formed at the surface. Protein adsorption onto these films was found to be closely correlated to the alumina surface fraction, with high alumina content at the surface leading to low amounts of adsorbed fibrinogen and albumin. Protein adsorption amounts obtained with WDS and SE were in excellent agreement for all films. This suggests that this combinatorial materials approach combined with these state-of-the-art, automated high throughput instruments provides a novel way to accurately monitor protein adsorption taking place at the surfaces of these metal/metal oxide materials.

  10. Complex Refractive Index Spectra of CH3NH3PbI3 Perovskite Thin Films Determined by Spectroscopic Ellipsometry and Spectrophotometry.

    PubMed

    Löper, Philipp; Stuckelberger, Michael; Niesen, Bjoern; Werner, Jérémie; Filipič, Miha; Moon, Soo-Jin; Yum, Jun-Ho; Topič, Marko; De Wolf, Stefaan; Ballif, Christophe

    2015-01-02

    The complex refractive index (dielectric function) of planar CH3NH3PbI3 thin films at room temperature is investigated by variable angle spectroscopic ellipsometry and spectrophotometry. Knowledge of the complex refractive index is essential for designing photonic devices based on CH3NH3PbI3 thin films such as solar cells, light-emitting diodes, or lasers. Because the directly measured quantities (reflectance, transmittance, and ellipsometric spectra) are inherently affected by multiple reflections, the complex refractive index has to be determined indirectly by fitting a model dielectric function to the experimental spectra. We model the dielectric function according to the Forouhi-Bloomer formulation with oscillators positioned at 1.597, 2.418, and 3.392 eV and achieve excellent agreement with the experimental spectra. Our results agree well with previously reported data of the absorption coefficient and are consistent with Kramers-Kronig transformations. The real part of the refractive index assumes a value of 2.611 at 633 nm, implying that CH3NH3PbI3-based solar cells are ideally suited for the top cell in monolithic silicon-based tandem solar cells.

  11. In-depth characterization and computational 3D reconstruction of flagellar filament protein layer structure based on in situ spectroscopic ellipsometry measurements

    NASA Astrophysics Data System (ADS)

    Kozma, Peter; Kozma, Daniel; Nemeth, Andrea; Jankovics, Hajnalka; Kurunczi, Sandor; Horvath, Robert; Vonderviszt, Ferenc; Fried, Miklos; Petrik, Peter

    2011-06-01

    In this study, we have reconstructed the statistical 3D structure of hundreds of nanometers thick surface immobilized flagellar filament protein layers in their native environment, in buffer solution. The protein deposition onto the surface activated Ta 2O 5 film was performed in a flow cell, and the immobilization process was followed by in situ spectroscopic ellipsometry. A multilayer optical model was developed, in that the protein layer was described by five effective medium sublayers. Applying this method, an in-depth analysis of the protein layer formation was performed. Based on the kinetics in the distribution of the surface mass density, the statistical properties of the filamentous film could be determined computationally as a function of the measurement time. It was also demonstrated that the 3D structure of the protein layer can be reconstructed based on the calculated in-depth mass density profile. The computational investigation revealed that the filaments can be classified into two individual groups in approximately equal ratio according to their orientation. In the first group the filaments are close to laying position, whereas in the second group they are in a standing position, resulting in a significantly denser sublayer close to the substrate than at a larger distance.

  12. Infrared Spectroscopic Imaging for Prostate Pathology Practice

    DTIC Science & Technology

    2008-03-01

    2002) Genetics-based machine learning using fine-grained parallelism for data mining. Doctoral dissertation, Enginyeria i Arquitectura La Salle...illigal.ge.uiuc.edu/lcs-n-gbml/. [21] X. Llorà. Genetics-Based Machine Learning using Fine-grained Parallelism for Data Mining. PhD thesis, Enginyeria i Arquitectura ...infrared focal-plane array detector. Anal Chem 1995, 67, (19), 3377-81. 9.Bhargava, R.; Wang, S. Q .; Koenig, J. L., FTIR microspectroscopy of

  13. Spectroscopic Ellipsometry Studies of Thin Film a-Si:H/nc-Si:H Micromorph Solar Cell Fabrication in the p-i-n Superstrate Configuration

    NASA Astrophysics Data System (ADS)

    Huang, Zhiquan

    Spectroscopic ellipsometry (SE) is a non-invasive optical probe that is capable of accurately and precisely measuring the structure of thin films, such as their thicknesses and void volume fractions, and in addition their optical properties, typically defined by the index of refraction and extinction coefficient spectra. Because multichannel detection systems integrated into SE instrumentation have been available for some time now, the data acquisition time possible for complete SE spectra has been reduced significantly. As a result, real time spectroscopic ellipsometry (RTSE) has become feasible for monitoring thin film nucleation and growth during the deposition of thin films as well as during their removal in processes of thin film etching. Also because of the reduced acquisition time, mapping SE is possible by mounting an SE instrument with a multichannel detector onto a mechanical translation stage. Such an SE system is capable of mapping the thin film structure and its optical properties over the substrate area, and thereby evaluating the spatial uniformity of the component layers. In thin film photovoltaics, such structural and optical property measurements mapped over the substrate area can be applied to guide device optimization by correlating small area device performance with the associated local properties. In this thesis, a detailed ex-situ SE study of hydrogenated amorphous silicon (a-Si:H) thin films and solar cells prepared by plasma enhanced chemical vapor deposition (PECVD) has been presented. An SE analysis procedure with step-by-step error minimization has been applied to obtain accurate measures of the structural and optical properties of the component layers of the solar cells. Growth evolution diagrams were developed as functions of the deposition parameters in PECVD for both p-type and n-type layers to characterize the regimes of accumulated thickness over which a-Si:H, hydrogenated nanocrystalline silicon (nc-Si:H) and mixed phase (a

  14. Quantitative Infrared Spectroscopic Measurements of Boron Fluorides.

    DTIC Science & Technology

    1980-08-01

    1959). 35. D.M. Yost, D. Devault, T.F. Anderson, and E.N. Lassettre, J. Cher. Phys. 6, 424 (1938). 36. G. Herzberg , "Infrared and Raman Spectra...34 (Van Nostrand Reinhold, New York, 1945). 37. W.F. Edgell and R.E. Moynihan, 3. Chem. Phys. 45, 1205 (1966). 38. S.L. Gerhard and D.M. Dennison, Phys...positions for the 10BF isotope are shifted 0.7 cm to the red and are calculated according to Herzberg . The spectral slit encompasses 14 lines, R(8) through

  15. Spectroscopic ellipsometry study of the effect of illumination and thermal annealing on the optical constants of thin Ge-As-S films

    NASA Astrophysics Data System (ADS)

    Pamukchieva, V.; Szekeres, A.; Arsova, D.

    2011-02-01

    The effects of illumination and post-illumination thermal annealing on the optical properties of chalcogenide thin (~150 nm) films were studied by spectroscopic ellipsometry. The films were thermally evaporated from Ge30.8As5.7S63.5 and Ge32As5S63 glasses. They were exposed to illumination with an HBO 500 lamp and to subsequent thermal annealing at a temperature of 350 °C. Ellipsometric measurements in the spectral range 300-820 nm were carried out after each technological step. From the ellipsometric data analysis the optical constants (n, k, ɛ), optical band gap energy Eog and film thickness have been determined, while the oscillator energies E0 and Ed have been estimated applying the single-oscillator approximation theory. In the ɛ2 spectra three peaks, denoted by E1, E2 and E3, have appeared, which are attributed to interband transitions. By illumination, the values of the complex refractive index (\\tilde n = n - {\\rm{i}}k), dielectric function (\\skew3\\tilde \\varepsilon = \\varepsilon _1 - {\\rm{i}}\\varepsilon _{\\rm{2}} ) and dispersion energy Ed decrease, whereas the band gap energy (Eog) and the oscillator energy (E0) values increase. All these are accompanied by a ~12-13% enhancement of film thickness. Thermal annealing leads to a further increase of the energetic parameters values, but causes a ~14-15% decrease of film thickness in comparison to that of illuminated films. The E1 and E2 peaks diminish on illumination and post-illumination annealing, whereas the magnitude of the E3 peak decreases on illumination and increases by annealing, approaching its initial value for the as-deposited state.

  16. Spectroscopic ellipsometry determination of the optical constants of titanium-doped WO{sub 3} films made by co-sputter deposition

    SciTech Connect

    Vargas, M.; Rubio, E. J.; Gutierrez, A.; Ramana, C. V.

    2014-04-07

    Titanium (Ti) doped tungsten oxide (WO{sub 3}) thin films were grown by co-sputter deposition of W and Ti metal targets. The sputtering powers to the W and Ti were kept constant at 100 W and 50 W, respectively, while varying the growth temperature (T{sub s}) in the range of 25–400 °C. The structural quality of Ti-doped WO{sub 3} films is dependent on T{sub s}. Ti-doped WO{sub 3} films grown at T{sub s} < 400 °C were amorphous. A temperature of 400 °C is critical to promote the structural order and formation of monoclinic, nanocrystalline films. The optical constants and their dispersion profiles determined from spectroscopic ellipsometry indicate that there is no significant inter-diffusion at the film-substrate interface for W-Ti oxide film growth of ∼40 nm. The index refraction (n) at λ = 550 nm varies in the range of 2.15–2.40 with a gradual increase in T{sub s}. Lorentz-Lorenz analysis (n{sub (λ)} = 550 nm) of the data indicates the gradual improvement in the packing density coupled with structural transformation accounts for the observed optical quality of the Ti-doped WO{sub 3} films as a function of T{sub s}. A correlation between the growth conditions and optical constants is discussed.

  17. Optical properties of silicon nanocrystals embedded in Si3N4 matrix measured by spectroscopic ellipsometry and UV-Vis-NIR spectroscopy

    NASA Astrophysics Data System (ADS)

    Barbé, J.; Despax, B.; Perraud, S.; Makasheva, K.

    2014-04-01

    In this paper, we report a spectroscopic ellipsometry study of the optical properties of silicon nanocrystals (Si-ncs) embedded in silicon nitride matrix. The nanocomposite thin-films were elaborated by radiofrequency plasma enhanced chemical vapor deposition from ammonia and silane precursors, followed by high temperature annealing. Bruggeman effective medium approximation combined with the Tauc-Lorentz dispersion law was found to be an appropriate model in describing the ellipsometric data, and provided a fine determination of the dielectric functions or complex permittivity of Si-ncs embedded in silicon nitride. It is shown that the dielectric functions of Si-ncs undergo a large reduction in amplitude and broadening compared to the dielectric function of the bulk crystalline Si. Consequently to the disappearance of direct transition energy E 1 and E 2, the imaginary part ɛ 2 of the dielectric function of Si-ncs exhibits a single line shape centered between E 1 and E 2. With decreasing Si-ncs size, we observe a red-shift of ɛ 2 which cannot be attributed to bandgap expansion, but is better explained by electron-phonon interactions in the case of a Si3N4 matrix with high Young modulus. According to Tauc-Lorentz dispersion law, the obtained bandgap values of Si-ncs are between 1.58 eV and 1.67 eV for Si-ncs with diameters from 4.6 nm to 3.8 nm, which is in good agreement with measurements from UV-Vis-NIR spectroscopy.

  18. Ultrafast dynamic ellipsometry and spectroscopy of laser shocked materials

    SciTech Connect

    Bolme, Cynthia A; Mc Grane, Shawn D; Dang, Nhan C; Whitley, Von H; Moore, David S.

    2011-01-20

    Ultrafast dynamic ellipsometry is used to measure the material motion and changes in the optical refractive index of laser shock compressed materials. This diagnostic has shown us that the ultrafast laser driven shocks are the same as shocks on longer timescales and larger length scales. We have added spectroscopic diagnostics of infrared absorption, ultra-violet - visible transient absorption, and femtosecond stimulated Raman scattering to begin probing the initiation chemistry that occurs in shock reactive materials. We have also used the femtosecond stimulated Raman scattering to measure the vibrational temperature of materials using the Stokes gain to anti-Stokes loss ratio.

  19. Vibrational Spectroscopic Microscopy: Raman, Near-Infrared and Mid-Infrared Imaging Techniques

    NASA Astrophysics Data System (ADS)

    Lewis, E. Neil; Levin, Ira W.

    1995-02-01

    New instrumental approaches for performing vibrational Raman, near-infrared and mid-infrared spectroscopic imaging microscopy are described. The instruments integrate imaging quality filters such as acousto-optic tunable filters (AOTFs), with visible charge-coupled device (CCD) and infrared focal-plane array detectors. These systems are used in conjunction with infinity-corrected, refractive microscopes for operation in the visible and near-infrared spectral regions and with Cassegrainian reflective optics for operation in the mid-infrared spectral interval. Chemically specific images at moderate spectral resolution (2 nm) and high spatial resolution (1 [mu]m) can be collected rapidly and noninvasively. Image data are presented containing 128 × 128 pixels, although significantly larger format images can be collected in approximately the same time. The instruments can be readily configured for both absorption and reflectance spectroscopies. We present Raman emission images of polystyrene microspheres and a lipid/amino acid mixture and near-infrared images of onion epidermis and a hydrated phospholipid dispersion. Images generated from mid-infrared spectral data are presented for a KBr disk containing nonhomogeneous domains of lipid and for 50-[mu]m slices of monkey cerebellum. These are the first results illustrating the use of infrared focal-plane array detectors as chemically specific spectroscopic imaging devices and demonstrating their application in biomolecular areas. Extensions and future applications of the various vibrational spectroscopic imaging techniques are discussed.

  20. AKARI INFRARED CAMERA SURVEY OF THE LARGE MAGELLANIC CLOUD. II. THE NEAR-INFRARED SPECTROSCOPIC CATALOG

    SciTech Connect

    Shimonishi, Takashi; Onaka, Takashi; Kato, Daisuke; Sakon, Itsuki; Ita, Yoshifusa; Kawamura, Akiko; Kaneda, Hidehiro

    2013-02-01

    We performed a near-infrared spectroscopic survey toward an area of {approx}10 deg{sup 2} of the Large Magellanic Cloud (LMC) with the infrared satellite AKARI. Observations were carried out as part of the AKARI Large-area Survey of the Large Magellanic Cloud (LSLMC). The slitless multi-object spectroscopic capability of the AKARI/IRC enabled us to obtain low-resolution (R {approx} 20) spectra in 2-5 {mu}m for a large number of point sources in the LMC. As a result of the survey, we extracted about 2000 infrared spectra of point sources. The data are organized as a near-infrared spectroscopic catalog. The catalog includes various infrared objects such as young stellar objects (YSOs), asymptotic giant branch (AGB) stars, supergiants, and so on. It is shown that 97% of the catalog sources have corresponding photometric data in the wavelength range from 1.2 to 11 {mu}m, and 67% of the sources also have photometric data up to 24 {mu}m. The catalog allows us to investigate near-infrared spectral features of sources by comparison with their infrared spectral energy distributions. In addition, it is estimated that about 10% of the catalog sources are observed at more than two different epochs. This enables us to study a spectroscopic variability of sources by using the present catalog. Initial results of source classifications for the LSLMC samples are presented. We classified 659 LSLMC spectra based on their near-infrared spectral features by visual inspection. As a result, it is shown that the present catalog includes 7 YSOs, 160 C-rich AGBs, 8 C-rich AGB candidates, 85 O-rich AGBs, 122 blue and yellow supergiants, 150 red super giants, and 128 unclassified sources. Distributions of the classified sources on the color-color and color-magnitude diagrams are discussed in the text. Continuous wavelength coverage and high spectroscopic sensitivity in 2-5 {mu}m can only be achieved by space observations. This is an unprecedented large-scale spectroscopic survey toward the

  1. Phonon and free-charge carrier properties in group-III nitride heterostructures investigated by spectroscopic ellipsometry and optical Hall effect

    NASA Astrophysics Data System (ADS)

    Schoeche, Stefan

    The material class of group-III nitrides gained tremendous technological importance for optoelectronic and high-power/high-frequency amplification devices. Tunability of the direct band gap from 0.65 eV (InN) to 6.2 eV (AlN) by alloying, high breakthrough voltages and intrinsic mobilities, as well as the formation of highly mobile 2d electron gases (2DEG) at heterointerfaces make these compounds ideal for many applications. GaN and Ga-rich alloys are well studied and current research is mainly device-oriented. For example, choice and quality of the gate dielectric significantly influence device performance in high-electron mobility transistors (HEMT) which utilize highly mobile 2DEGs at heterointerfaces. Experimental access to the 2DEG channel properties without influence from parasitic currents or contact properties are desirable. In- and Al-rich ternary alloys are less explored than Ga-rich compounds. For InN and In-rich alloys, while many material parameters such as stiffness constants or effective mass values are largely unknown, reliable p-type doping is a major challenge, also because p-type conducting channels are buried within highly conductive n-type material formed at the surface and interfaces preventing electrical characterization. For AlN and high-Al content alloys, doping mechanisms are not understood and reliable fabrication of material with high free-charge carrier (FCC) concentrations was achieved just recently. Difficulties to form ohmic contacts impair electrical measurements and optical characterization is impeded by lack of high-energy excitation sources. In this work, spectroscopic ellipsometry over the wide spectral range from the THz to VUV in combination with optical Hall effect (generalized ellipsometry with applied magnetic field) from THz to MIR are applied in order to investigate the phonon modes and FCC properties in group-III nitride heterostructures. Adequate model descriptions and analysis strategies are introduced which allow

  2. Temperature-dependent phonon Raman scattering and spectroscopic ellipsometry of pure and Ca-doped Sr x Ba1-x Nb2O6 ferroelectric ceramics across the phase transition region

    NASA Astrophysics Data System (ADS)

    Peng, Liang; Jiang, Kai; Zhang, Jinzhong; Hu, Zhigao; Wang, Genshui; Dong, Xianlin; Chu, Junhao

    2016-01-01

    Optical phonons and the phase transition of relaxor ferroelectric ceramics Sr x Ba1-x Nb2O6 (SBN) and Ca y (Sr0.5Ba0.5)1-y Nb2O6 (CSBN) with different composition (0.3≤slant x≤slant 0.5 , 0.1≤slant y≤slant 0.2 ) have been investigated by variable-temperature Raman scattering and spectroscopic ellipsometry. The anomalous temperature dependence of Tauc gap energy (E t ) is used to fit the phonon energy dependence of the permittivity, and the Raman intensity of some interesting optical phonons can be ascribed to the phase transition from a ferroelectric to a paraelectric structure. The Curie temperature of SBN decreases from 556 to 359 K with increasing Sr composition, which can be attributed to the substitution of smaller Sr2+ for Ba2+. On increasing the Ca composition, however, the phase transition temperature of CSBN remains nearly unchanged at about 350 K. This could be due to the fact that most doped Ca2+ ions move into the oxygen ion site and exhibit no obvious effect on the vibrational properties. Therefore, the general disorder which results from Sr2+ substituting Ba2+ , dominates the phase transition process for SBN-based ferroelectric oxides. Meanwhile, the dielectric functions from 200 to 600 K have been evaluated with the aid of the Tauc-Lorentz model. The electronic transition is located at about 5 eV and decreases with increasing temperature for all the samples. Moreover, the phase transition temperature range derived from the spectroscopic ellipsometry agrees well with that from the Raman scattering. It reveals that the variation of the fundamental energy gap may be associated with the phase transition of SBN ceramics. Both Raman scattering and spectroscopic ellipsometry are proven to be a effective method of exploring the phase transition of ferroelectric oxides.

  3. Wide Integral Field Infrared Spectroscopic Survey of Nearby Galaxies

    NASA Astrophysics Data System (ADS)

    Sivanandam, Suresh; Moon, Dae-Sik; Zaritsky, Dennis F.; Chou, Richard; Meyer, Elliot; Ma, Ke; Jarvis, Miranda; Eisner, Joshua A.

    2015-01-01

    We are constructing a novel infrared integral field spectrograph with a large field of view (~50'x20') that will be available on the Kitt Peak 90' Bok telescope this spring. This wide integral field infrared spectrograph (WIFIS) operates over two wavelength ranges, zJ-band (0.9-1.35 microns) and H-band (1.5-1.8 microns), and has moderate spectral resolving power, 3,000 in zJ-band and 2,200 in H-band, respectively. WIFIS' field-of-view is comparable to current optical integral field spectrographs that are carrying out large galaxy surveys, e.g. SAMI, CALIFA, and MaNGA. We are designing a large nearby galaxy survey to complement the data already been taken by these optical integral field spectroscopic surveys. The near-infrared window provides a sensitive probe of the initial mass functions of stellar populations, the OB stellar fractions in massive star forming regions, and the kinematics of and obscured star formation within merging systems. This will be the first large scale infrared integral field spectroscopic survey of nearby galaxies.

  4. Fundamental developments in infrared spectroscopic imaging for biomedical applications.

    PubMed

    Pilling, Michael; Gardner, Peter

    2016-04-07

    Infrared chemical imaging is a rapidly emerging field with new advances in instrumentation, data acquisition and data analysis. These developments have had significant impact in biomedical applications and numerous studies have now shown that this technology offers great promise for the improved diagnosis of the diseased state. Relying on purely biochemical signatures rather than contrast from exogenous dyes and stains, infrared chemical imaging has the potential to revolutionise histopathology for improved disease diagnosis. In this review we discuss the recent advances in infrared spectroscopic imaging specifically related to spectral histopathology (SHP) and consider the current state of the field. Finally we consider the practical application of SHP for disease diagnosis and consider potential barriers to clinical translation highlighting current directions and the future outlook.

  5. Synchrotron radiation-based far-infrared spectroscopic ellipsometer with full Mueller-matrix capability

    SciTech Connect

    Stanislavchuk, T. N.; Kang, T. D.; Rogers, P. D.; Standard, E. C.; Basistyy, R.; Nita, G.; Zhou, T.; Sirenko, A. A.; Kotelyanskii, A. M.; Carr, G. L.; Kotelyanskii, M.

    2013-02-15

    We developed far-IR spectroscopic ellipsometer at the U4IR beamline of the National Synchrotron Light Source in Brookhaven National Laboratory. This ellipsometer is able to measure both, rotating analyzer and full-Mueller matrix spectra using rotating retarders, and wire-grid linear polarizers. We utilize exceptional brightness of synchrotron radiation in the broad spectral range between about 20 and 4000 cm{sup -1}. Fourier-transform infrared (FT-IR) spectrometer is used for multi-wavelength data acquisition. The sample stage has temperature variation between 4.2 and 450 K, wide range of {theta}-2{theta} angular rotation, {chi} tilt angle adjustment, and X-Y-Z translation. A LabVIEW-based software controls the motors, sample temperature, and FT-IR spectrometer and also allows to run fully automated experiments with pre-programmed measurement schedules. Data analysis is based on Berreman's 4 Multiplication-Sign 4 propagation matrix formalism to calculate the Mueller matrix parameters of anisotropic samples with magnetic permeability {mu}{ne} 1. A nonlinear regression of the rotating analyzer ellipsometry and/or Mueller matrix (MM) spectra, which are usually acquired at variable angles of incidence and sample crystallographic orientations, allows extraction of dielectric constant and magnetic permeability tensors for bulk and thin-film samples. Applications of this ellipsometer setup for multiferroic and ferrimagnetic materials with {mu}{ne} 1 are illustrated with experimental results and simulations for TbMnO{sub 3} and Dy{sub 3}Fe{sub 5}O{sub 12} single crystals. We demonstrate how magnetic and electric dipoles, such as magnons and phonons, can be distinguished from a single MM measurement without adducing any modeling arguments. The parameters of magnetoelectric components of electromagnon excitations are determined using MM spectra of TbMnO{sub 3}.

  6. Synchrotron radiation-based far-infrared spectroscopic ellipsometer with full Mueller-matrix capability.

    PubMed

    Stanislavchuk, T N; Kang, T D; Rogers, P D; Standard, E C; Basistyy, R; Kotelyanskii, A M; Nita, G; Zhou, T; Carr, G L; Kotelyanskii, M; Sirenko, A A

    2013-02-01

    We developed far-IR spectroscopic ellipsometer at the U4IR beamline of the National Synchrotron Light Source in Brookhaven National Laboratory. This ellipsometer is able to measure both, rotating analyzer and full-Mueller matrix spectra using rotating retarders, and wire-grid linear polarizers. We utilize exceptional brightness of synchrotron radiation in the broad spectral range between about 20 and 4000 cm(-1). Fourier-transform infrared (FT-IR) spectrometer is used for multi-wavelength data acquisition. The sample stage has temperature variation between 4.2 and 450 K, wide range of θ-2θ angular rotation, χ tilt angle adjustment, and X-Y-Z translation. A LabVIEW-based software controls the motors, sample temperature, and FT-IR spectrometer and also allows to run fully automated experiments with pre-programmed measurement schedules. Data analysis is based on Berreman's 4 × 4 propagation matrix formalism to calculate the Mueller matrix parameters of anisotropic samples with magnetic permeability μ ≠ 1. A nonlinear regression of the rotating analyzer ellipsometry and∕or Mueller matrix (MM) spectra, which are usually acquired at variable angles of incidence and sample crystallographic orientations, allows extraction of dielectric constant and magnetic permeability tensors for bulk and thin-film samples. Applications of this ellipsometer setup for multiferroic and ferrimagnetic materials with μ ≠ 1 are illustrated with experimental results and simulations for TbMnO3 and Dy3Fe5O12 single crystals. We demonstrate how magnetic and electric dipoles, such as magnons and phonons, can be distinguished from a single MM measurement without adducing any modeling arguments. The parameters of magnetoelectric components of electromagnon excitations are determined using MM spectra of TbMnO3.

  7. Infrared Imaging, Spectroscopic, and Photometric Studies of Comets

    NASA Technical Reports Server (NTRS)

    Gehrz, Robert D.

    1997-01-01

    We have continued our program of infrared (IR) photometric, imaging, spectroscopic, and polarimetric temporal observations of comets to study the properties of comet dust and comet nuclei. During the first two years we digitized our IR data base on P/Halley and other recent comets to facilitate further analysis and comparison with other data bases, and found compelling evidence for the emission of a burst of small grains from P/Halley's nucleus at perihelion. We reported imaging and photometric observations of Comets Austin 1990 V and Swift-Tuttle 1992. The Swift-Tuttle 1992t observations included IR photometry, several 7-14 micron long-slit spectra of the coma and a time-sequence of more than 150 10 micron broadband images of the coma. An analysis of near-IR images of the inner coma of P/Halley obtained on three consecutive nights in 1986 March showed sunwardjets. We completed our analysis of IR imaging spectrosco-photometric data on comets. We also obtained observations of Comets Hyakutake 1996 B2 and Hale/Bopp 1995 01. We obtained infrared imaging, photometric, spectroscopic and polarimetric temporal observations of bright comets using a network of five telescopes, with emphasis on simultaneous observations of comets at many wavelengths with different instruments. Our program offers several unique advantages: 1) rapid observational response to new comets with dedicated infrared telescopes; 2) observations within a few degrees of the sun when comets are near perihelion and 3) access to advanced infrared array imagers and spectrometers. In particular, reduction, analysis, publication and archiving of our Jupiter/sl-9 and Comet Hyakutake infrared data received special emphasis. Instrumentation development included installation of the latest version of the innovative FORTH telescope control and a data acquisition system that enables us to control three telescopes remotely by telephone from anywhere in the world for comet observations in broad daylight. We have

  8. Atmospheric and Spectroscopic Research in the Far Infrared

    NASA Technical Reports Server (NTRS)

    Park, Kwangjai

    1998-01-01

    The spectroscopic measurements of molecular parameters constitute one of the major areas of our research program. This part of our program has been conducted in close collaboration with Smithsonian Astrophysical Observatory (SAO) and National Institute of Standards and Technology (NIST). The references on HO2, OH, and O2 that appear on the publication list are examples of this type of work completed during the grant period. These pressure-broadening studies have provided the kind of improvements needed in the database for retrieving atmospheric profiles from far infrared limb sensing data. One example of this linkage between the pressure broadening studies and the improvements in data retrieval is described in the paper on HBr (paper #4, publication list). The retrieval of the concentration profile of this important species from the IBEX data was facilitated by a number of performance improvement factors, not the least of which was the database improvements.

  9. Analysis of Forensic Casework Utilizing Infrared Spectroscopic Imaging †

    PubMed Central

    Lanzarotta, Adam

    2016-01-01

    A search of the current scientific literature yields a limited number of studies that describe the use of Fourier transform infrared (FT-IR) spectroscopic imaging for the analysis of forensic casework, which is likely due to the fact that these instruments are fairly new commodities to the field of analytical chemistry and are therefore not yet commonplace in forensic laboratories. This report describes recent forensic case studies that have used the technique for determining the composition of a wide variety of multi-component sample types, including animal tissue sections for toxic inclusions, drugs/dietary supplements, an antibiotic with an active pharmaceutical ingredient (API) present as several different salt forms, an adulterated bulk API, unknown trace powders for illicit drugs and an ophthalmic solution suspected of being adulterated with bleach. PMID:26927101

  10. Infrared and Raman spectroscopic features of plant cuticles: a review

    PubMed Central

    Heredia-Guerrero, José A.; Benítez, José J.; Domínguez, Eva; Bayer, Ilker S.; Cingolani, Roberto; Athanassiou, Athanassia; Heredia, Antonio

    2014-01-01

    The cuticle is one of the most important plant barriers. It is an external and continuous lipid membrane that covers the surface of epidermal cells and whose main function is to prevent the massive loss of water. The spectroscopic characterization of the plant cuticle and its components (cutin, cutan, waxes, polysaccharides and phenolics) by infrared and Raman spectroscopies has provided significant advances in the knowledge of the functional groups present in the cuticular matrix and on their structural role, interaction and macromolecular arrangement. Additionally, these spectroscopies have been used in the study of cuticle interaction with exogenous molecules, degradation, distribution of components within the cuticle matrix, changes during growth and development and characterization of fossil plants. PMID:25009549

  11. Analysis of Forensic Casework Utilizing Infrared Spectroscopic Imaging.

    PubMed

    Lanzarotta, Adam

    2016-02-24

    A search of the current scientific literature yields a limited number of studies that describe the use of Fourier transform infrared (FT-IR) spectroscopic imaging for the analysis of forensic casework, which is likely due to the fact that these instruments are fairly new commodities to the field of analytical chemistry and are therefore not yet commonplace in forensic laboratories. This report describes recent forensic case studies that have used the technique for determining the composition of a wide variety of multi-component sample types, including animal tissue sections for toxic inclusions, drugs/dietary supplements, an antibiotic with an active pharmaceutical ingredient (API) present as several different salt forms, an adulterated bulk API, unknown trace powders for illicit drugs and an ophthalmic solution suspected of being adulterated with bleach.

  12. High Definition Infrared Spectroscopic Imaging for Lymph Node Histopathology

    PubMed Central

    Leslie, L. Suzanne; Wrobel, Tomasz P.; Mayerich, David; Bindra, Snehal; Emmadi, Rajyasree; Bhargava, Rohit

    2015-01-01

    Chemical imaging is a rapidly emerging field in which molecular information within samples can be used to predict biological function and recognize disease without the use of stains or manual identification. In Fourier transform infrared (FT-IR) spectroscopic imaging, molecular absorption contrast provides a large signal relative to noise. Due to the long mid-IR wavelengths and sub-optimal instrument design, however, pixel sizes have historically been much larger than cells. This limits both the accuracy of the technique in identifying small regions, as well as the ability to visualize single cells. Here we obtain data with micron-sized sampling using a tabletop FT-IR instrument, and demonstrate that the high-definition (HD) data lead to accurate identification of multiple cells in lymph nodes that was not previously possible. Highly accurate recognition of eight distinct classes - naïve and memory B cells, T cells, erythrocytes, connective tissue, fibrovascular network, smooth muscle, and light and dark zone activated B cells was achieved in healthy, reactive, and malignant lymph node biopsies using a random forest classifier. The results demonstrate that cells currently identifiable only through immunohistochemical stains and cumbersome manual recognition of optical microscopy images can now be distinguished to a similar level through a single IR spectroscopic image from a lymph node biopsy. PMID:26039216

  13. The molecular structure of chloritoid: a mid-infrared and near-infrared spectroscopic study.

    PubMed

    Li, Kuo; Liu, Qinfu; Cheng, Hongfei; Deng, Yutao; Frost, Ray L

    2015-06-15

    The mineral chloritoid collected from the argillite in the bottom of Yaopo Formation of Western Beijing was characterized by mid-infrared (MIR) and near-infrared (NIR) spectroscopy. The MIR spectra showed all fundamental vibrations including the hydroxyl units, basic aluminosilicate framework and the influence of iron on the chloritoid structure. The NIR spectrum of the chloritoid showed combination (ν+δ)OH bands with the fundamental stretching (ν) and bending (δ) vibrations. Based on the chemical component data and the analysis result from the MIR and NIR spectra, the crystal structure of chloritoid from western hills of Beijing, China, can be illustrated. Therefore, the application of the technique across the entire infrared region is expected to become more routine and extend its usefulness, and the reproducibility of measurement and richness of qualitative information should be simultaneously considered for proper selection of a spectroscopic method for the unit cell structural analysis.

  14. Time-resolved infrared spectroscopic techniques as applied to channelrhodopsin

    PubMed Central

    Ritter, Eglof; Puskar, Ljiljana; Bartl, Franz J.; Aziz, Emad F.; Hegemann, Peter; Schade, Ulrich

    2015-01-01

    Among optogenetic tools, channelrhodopsins, the light gated ion channels of the plasma membrane from green algae, play the most important role. Properties like channel selectivity, timing parameters or color can be influenced by the exchange of selected amino acids. Although widely used, in the field of neurosciences for example, there is still little known about their photocycles and the mechanism of ion channel gating and conductance. One of the preferred methods for these studies is infrared spectroscopy since it allows observation of proteins and their function at a molecular level and in near-native environment. The absorption of a photon in channelrhodopsin leads to retinal isomerization within femtoseconds, the conductive states are reached in the microsecond time scale and the return into the fully dark-adapted state may take more than minutes. To be able to cover all these time regimes, a range of different spectroscopical approaches are necessary. This mini-review focuses on time-resolved applications of the infrared technique to study channelrhodopsins and other light triggered proteins. We will discuss the approaches with respect to their suitability to the investigation of channelrhodopsin and related proteins. PMID:26217670

  15. Far-infrared Spectroscopic Characterization of Anti-vinyl Alcohol

    NASA Astrophysics Data System (ADS)

    Bunn, Hayley; Soliday, Rebekah M.; Sumner, Isaiah; Raston, Paul L.

    2017-09-01

    We report a detailed analysis of the high-resolution far-infrared spectrum of anti-vinyl alcohol, which has been previously identified toward Sagittarius B2(N). The ν 15 OH torsional fundamental investigated here is more than 200 cm‑1 removed from the next nearest vibration, making it practically unperturbed and ideal to help refine the ground state rotational constants that were previously determined from 25 microwave lines. We assigned 1335 lines within the ν 15 fundamental centered at 261.5512 cm‑1, with J and K a ranges of 1–59 and 0–16, respectively. The microwave and far-infrared line positions were fit with Watson-type A- and S-reduced Hamiltonians, with the inclusion of quartic and select sextic distortion terms. This resulted in a significant refinement of the ground state constants, in addition to the determination of the {ν }15=1 state constants for the first time. The spectroscopic parameters are in good agreement with the results from anharmonic coupled-cluster calculations, and should be useful in searches for rotationally and/or vibrationally warm anti-vinyl alcohol in interstellar molecular clouds.

  16. Raman and ellipsometry spectroscopic analysis of graphene films grown directly on Si substrate via CVD technique for estimating the graphene atomic planes number

    NASA Astrophysics Data System (ADS)

    Al-Hazmi, F. S.; Beall, Gary W.; Al-Ghamdi, A. A.; Alshahrie, Ahmed; Shokr, F. S.; Mahmoud, Waleed E.

    2016-08-01

    Two reliable approaches for estimating the number of atomic planes of graphene films grown on Si substrate were demonstrated by Raman and ellipsometry spectroscopies. The first approach depends on the measurement of the ratio of the integrated Raman scattering intensity of the graphene G band to the optical phonon band of Si substrate (IG/ISi). The second approach belongs to ellipsometry measurement of the ratio of the amplitude of the reflected polarized light from the surface of the graphene films to the amplitude of reflected polarized light from the surface of the Si substrate (ΨG/ΨSi). These two approaches could efficiently recognize the number of atomic planes in the graphene films (1 ≤ n ≤ 10). The results were compared with atomic force microscopy (AFM) measurement and showed a linear regression with slope of 0.36 ± 0.01 nm/graphene layer. The Two approaches will open a new avenue to efficiently count the number of graphene layers during the preparation process.

  17. Infrared Spectroscopic Studies with the Stratospheric Observatory for Infrared Astronomy (sofia)

    NASA Astrophysics Data System (ADS)

    Gehrz, R. D.; Becklin, E. E.

    2011-06-01

    The joint U.S. and German Stratospheric Observatory for Infrared Astronomy (SOFIA) will be a premier facility for studying the physics and chemistry of the interstellar medium and the stellar evolution process for many decades. SOFIA's first-generation instrument complement includes broadband imagers, moderate resolution spectrographs capable of resolving broad features due to dust and large molecules, and high resolution spectrometers suitable for kinematic studies of molecular and atomic gas lines at km/s resolution. SOFIA spectroscopic science applications will be discussed, with special emphasis on investigations related to infrared spectroscopy of astrophysical gas, grains, and ices. First light images and early science results related to these topics will be presented.

  18. Development of ultra-broadband terahertz time domain ellipsometry

    NASA Astrophysics Data System (ADS)

    Yamashita, Masatsugu; Otani, Chiko

    2015-08-01

    We developed a reflection type ultra-broad band terahertz time-domain spectroscopic ellipsometry covering the frequency range from 0.5 to 30 THz. The system utilizes two nonlinear optical crystals of GaP and GaSe as terahertz and mid-infrared sources, respectively, and employs a detector based on a photoconductive antenna switch using a low temperature grown GaAs (LT-GaAs) epitaxial layer transferred on Si substrate. By switching the emitter, the measurable frequency range can be easily changed from the 0.5-7.8 THz range to the 7.8-30 THz range without additional optical alignment. We measured the dielectric function of a p-type InAs wafer and the complex optical conductivity of an indium tin oxide (ITO) thin film. The obtained carrier density and the mobility of the ITO thin film show good agreement with that obtained by the Hall

  19. Extracting the complex optical conductivity of mono- and bilayer graphene by ellipsometry

    NASA Astrophysics Data System (ADS)

    Chang, You-Chia; Liu, Chang-Hua; Liu, Che-Hung; Zhong, Zhaohui; Norris, Theodore B.

    2014-06-01

    A method for analysis of spectroscopic ellipsometry data is demonstrated to extract the optical conductivity of mono- and bilayer chemical-vapor-deposited graphene. We model graphene as a truly two-dimensional (2D) material with a sheet conductivity, rather than a phenomenological effective refractive index as has been used in the literature. This technique measures both the real and imaginary part of the optical conductivity, which is important for graphene optoelectronics and metamaterials. Using this method, we obtain broadband measurements of the complex optical conductivity for mono- and bilayer graphene from ultraviolet to mid-infrared wavelengths. We also study how chemical doping with nitric acid modifies the complex optical conductivity.

  20. Temperature-dependent and anisotropic optical response of layered Pr0.5Ca1.5MnO4 probed by spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Majidi, M. A.; Thoeng, E.; Gogoi, P. K.; Wendt, F.; Wang, S. H.; Santoso, I.; Asmara, T. C.; Handayani, I. P.; van Loosdrecht, P. H. M.; Nugroho, A. A.; Rübhausen, M.; Rusydi, A.

    2013-06-01

    We study the temperature dependence as well as anisotropy of optical conductivity (σ1) in the pseudocubic single crystal Pr0.5Ca1.5MnO4 using spectrocopic ellipsometry. Three transition temperatures are observed and can be linked to charge-orbital (TCO/OO˜320 K), two-dimensional-antiferromagnetic (2D-AFM) (˜200 K), and three-dimensional AFM (TN˜125 K) orderings. Below TCO/OO, σ1 shows a charge-ordering peak (˜0.8 eV) with a significant blue shift as the temperature decreases. Calculations based on a model that incorporates a static Jahn-Teller distortion and assumes the existence of a local charge imbalance between two different sublattices support this assignment and explain the blue shift. This view is further supported by the partial spectral weight analysis showing the onset of optical anisotropy at TCO/OO in the charge-ordering region (0.5-2.5 eV). Interestingly, in the charge-transfer region (2.5-4 eV), the spectral weight shows anomalies around the T2D-AFM that we attribute to the role of oxygen-p orbitals in stabilizing the CE-type magnetic ordering. Our result shows the importance of spin, charge, orbital, and lattice degrees of freedom in this layered manganite.

  1. Mid-infrared reflectivity and ellipsometry measurements on single-crystal YBa2Cu3O7 and Bi2Sr2CuO6+y

    NASA Astrophysics Data System (ADS)

    Watanabe, Yukio; Wang, Z. Z.; Lyon, S. A.; Tsui, D. C.; Ong, N. P.; Tarascon, J. M.; Barboux, P.

    1989-10-01

    We have measured the room-temperature reflectivity of ``90-K'' single crystals YBa2Cu3O7 in the frequency range 600-9000 cm-1. The reflectivity R in these highly conducting samples (ρab=150 μΩ cm at 290 K) is found to be higher than in previous reports. We fit R to a simple Drude-Lorentz model and compare the fit parameters with the dc transport values. (The effective-mass ratio of the carriers is found to be 2.0, and the scattering rate ħ/τ is 3.1kBT at room temperature.) Ellipsometry measurements have also been performed using transverse-electric and transverse-magnetic polarizations. The dielectric dispersion derived from ellipsometry shows some important deviations from the Drude-Lorentz model. Reflectivity data from nonsuperconducting crystals of Bi2Sr2CuO6+y are also reported.

  2. The Cassini mission: Infrared and microwave spectroscopic measurements

    NASA Technical Reports Server (NTRS)

    Kunde, V. G.

    1989-01-01

    The Cassini Orbiter and Titan Probe model payloads include a number of infrared and microwave instruments. This document describes: (1) the fundamental scientific objectives for Saturn and Titan which can be addressed by infrared and microwave instrumentation, (2) the instrument requirements and the accompanying instruments, and (3) the synergism resulting from the comprehensive coverage of the total infrared and microwave spectrum by the complement of individual instruments. The baseline consists of four instruments on the orbiter and two on the Titan probe. The orbiter infrared instruments are: (1) a microwave spectrometer and radiometer; (2) a far to mid-infrared spectrometer; (3) a pressure modulation gas correlation spectrometer, and (4) a near-infrared grating spectrometer. The two Titan probe infrared instruments are: (1) a near-infrared instrument, and (2) a tunable diode laser infrared absorption spectrometer and nephelometer.

  3. Near infrared spectroscopic imaging assessment of cartilage composition: Validation with mid infrared imaging spectroscopy.

    PubMed

    Palukuru, Uday P; Hanifi, Arash; McGoverin, Cushla M; Devlin, Sean; Lelkes, Peter I; Pleshko, Nancy

    2016-07-05

    Disease or injury to articular cartilage results in loss of extracellular matrix components which can lead to the development of osteoarthritis (OA). To better understand the process of disease development, there is a need for evaluation of changes in cartilage composition without the requirement of extensive sample preparation. Near infrared (NIR) spectroscopy is a chemical investigative technique based on molecular vibrations that is increasingly used as an assessment tool for studying cartilage composition. However, the assignment of specific molecular vibrations to absorbance bands in the NIR spectrum of cartilage, which arise from overtones and combinations of primary absorbances in the mid infrared (MIR) spectral region, has been challenging. In contrast, MIR spectroscopic assessment of cartilage is well-established, with many studies validating the assignment of specific bands present in MIR spectra to specific molecular vibrations. In the current study, NIR imaging spectroscopic data were obtained for compositional analysis of tissues that served as an in vitro model of OA. MIR spectroscopic data obtained from the identical tissue regions were used as the gold-standard for collagen and proteoglycan (PG) content. MIR spectroscopy in transmittance mode typically requires a much shorter pathlength through the sample (≤10 microns thick) compared to NIR spectroscopy (millimeters). Thus, this study first addressed the linearity of small absorbance bands in the MIR region with increasing tissue thickness, suitable for obtaining a signal in both the MIR and NIR regions. It was found that the linearity of specific, small MIR absorbance bands attributable to the collagen and PG components of cartilage (at 1336 and 856 cm(-1), respectively) are maintained through a thickness of 60 μm, which was also suitable for NIR data collection. MIR and NIR spectral data were then collected from 60 μm thick samples of cartilage degraded with chondroitinase ABC as a model

  4. Infrared and raman spectroscopic studies of optically transparent zirconia (ZrO2) films deposited by plasma-assisted reactive pulsed laser deposition.

    PubMed

    Zhang, Wei; Gan, Jie; Hu, Zhigao; Yu, Wenlei; Li, Qian; Sun, Jian; Xu, Ning; Wu, Jiada; Ying, Zhifeng

    2011-05-01

    Plasma-assisted pulsed laser deposited zirconia (ZrO(2)) films were studied by Fourier transform infrared (FT-IR) and Raman spectroscopy for structural characterization and thermal stability in combination with optical characterization by spectroscopic ellipsometry and optical transmission measurements. Only the monoclinic ZrO(2) phase was positively identified from the infrared and Raman spectra of the as-deposited ZrO(2) films, which show excellent optical transparency from the ultraviolet to the near infrared as revealed by optical characterization. The as-deposited ZrO(2) films are free of any SiO(x) interfacial layer when deposited on silicon. The prepared ZrO(2) films exhibit good thermal stability in their structural, optical, and interfacial properties up to 900 °C. Upon annealing above 1100 °C, a silicon oxide interfacial layer forms due to the oxidation of the silicon substrate surface by the oxygen diffused from the oxide film to the silicon substrate at high temperatures.

  5. Optical constants and band gap determination of Pb0.95La0.05Zr0.54Ti0.46O3 thin films using spectroscopic ellipsometry and UV-visible spectroscopy

    NASA Astrophysics Data System (ADS)

    Batra, Vaishali; Kotru, Sushma; Varagas, M.; Ramana, C. V.

    2015-11-01

    We report the structural evolution and optical properties of lanthanum doped lead zirconate titanate (PLZT) thin films prepared on Pt/TiO2/SiO2/Si substrates by chemical solution deposition. X-ray diffraction demonstrates the post-deposition annealing induced crystallization for PLZT films annealed in a temperature (Ta) range of 550-750 °C. PLZT films annealed at higher temperature exhibit polycrystalline structure along with larger grain size. Optical band gap (Eg) values determined from UV-visible spectroscopy and spectroscopic ellipsometry (SE) for PLZT films were found to be in the range of 3.5-3.8 eV. Eg decreases with increasing Ta. The optical constants and their dispersion profiles for PLZT films were also determined from SE analyses. PLZT films show an index of refraction in the range of 2.46-2.50 (λ = 632.8 nm) with increase in Ta. The increase in refractive index at higher Ta is attributed to the improved packing density and crystallinity with the temperature.

  6. Study of CuPt-type ordering and dopant effect of In{sub 0.5}Ga{sub 0.5}P/GaAs using spectroscopic ellipsometry

    SciTech Connect

    Lee, H. |; Klein, M.V.; Olson, J.M.; Hsieh, K.C.

    1994-09-01

    The CuPt-type ordering and dopant effects of In{sub 0.5}Ga{sub 0.5}P/GaAs epitaxial layers have been studied using spectroscopic ellipsometry and transmission electron microscopy. The degree of ordering was estimated by both transmission electron diffraction and direct band edge, E{sub 0}. Conventional lineshape fitting of E{sub 1}, E{sub 1}+{Delta}{sub 1}, and E{sub 2} gaps using the second derivative of pseudo dielectric functions shows that the peak position and oscillator strength of the E{sub 1} gap are basically a function of CuPt-type ordering whereas their broadening and phase depend mainly on carrier concentration. The decrease of E{sub 1} gap is explained in terms of CuPt-type ordering. In contrast to the E{sub 1} gap, all the lineshape parameters of the E{sub 2} gap depend mainly on CuPt-type ordering. This difference is discussed in terms of apparent {open_quotes}CuAu-type ordering{close_quotes} or Y2 structure which was observed by transmission electron diffraction.

  7. Spectroscopic ellipsometry thin film and first-principles calculations of electronic and linear optical properties of [(C9H19NH3)2PbI2Br2] 2D perovskite

    NASA Astrophysics Data System (ADS)

    Abid, H.; Hlil, E. K.; Abid, Y.

    2017-03-01

    In this study we report results of first-principles density functional calculations using the full-potential linearized augmented plane wave (FP-LAPW) method as implemented in the WIEN2K code. We employed the generalized gradient approximation (GGA) for the exchange-correlation energy to calculate electronic and linear optical properties of the (C9H19NH3)2PbI2Br2 compound. The linear optical properties, namely, the real ε1 (ω) and imaginary ε2 (ω) parts of dielectric function, the refractive index n (ω) and the extinction coefficient k (ω) are calculated and compared with experimental spectroscopic ellipsometry spectra. The reflectivity R (ω) and electron energy loss function L (ω) are calculated too. Our calculations performed for band structure and density of states show that the valence band maximum and conduction band minimum are located at Γ point resulting in a direct band gap of about (Γv -Γc) of 2.42 eV in good agreement with the experimental data. The investigated compound has a large uniaxial anisotropy of the dielectric function of about 0.0739 and a negative birefringence at zero energy Δn (0) =-0.11.

  8. Characterisation of slab waveguides, fabricated in CaF2 and Er-doped tungsten-tellurite glass by MeV energy N+ ion implantation, using spectroscopic ellipsometry and m-line spectroscopy

    NASA Astrophysics Data System (ADS)

    Bányász, I.; Berneschi, S.; Lohner, T.; Fried, M.; Petrik, P.; Khanh, N. Q.; Zolnai, Z.; Watterich, A.; Bettinelli, M.; Brenci, M.; Nunzi-Conti, G.; Pelli, S.; Righini, G. C.; Speghini, A.

    2010-05-01

    Slab waveguides were fabricated in Er-doped tungsten-tellurite glass and CaF2 crystal samples via ion implantation. Waveguides were fabricated by implantation of MeV energy N+ ions at the Van de Graaff accelerator of the Research Institute for Particle and Nuclear Physics, Budapest, Hungary. Part of the samples was annealed. Implantations were carried out at energies of 1.5 MeV (tungsten-tellurite glass) and 3.5 MeV (CaF2). The implanted doses were between 5 x 1012 and 8 x 1016 ions/cm2. Refractive index profile of the waveguides was measured using SOPRA ES4G and Woollam M-2000DI spectroscopic ellipsometers at the Research Institute for Technical Physics and Materials Science, Budapest. Functionality of the waveguides was tested using a home-made instrument (COMPASSO), based on m-line spectroscopy and prism coupling technique, which was developed at the Materials and Photonics Devices Laboratory (MDF Lab.) of the Institute of Applied Physics in Sesto Fiorentino, Italy. Results of both types of measurements were compared to depth distributions of nuclear damage in the samples, calculated by SRIM 2007 code. Thicknesses of the guiding layer and of the implanted barrier obtained by spectroscopic ellipsometry correspond well to SRIM simulations. Irradiationinduced refractive index modulation saturated around a dose of 8 x 1016 ions/cm2 in tungsten-tellurite glass. Annealing of the implanted waveguides resulted in a reduction of the propagation loss, but also reduced the number of supported guiding modes at the lower doses. We report on the first working waveguides fabricated in an alkali earth halide crystal implanted by MeV energy medium-mass ions.

  9. Optical properties of amorphous and crystalline Sb-doped SnO2 thin films studied with spectroscopic ellipsometry: Optical gap energy and effective mass

    NASA Astrophysics Data System (ADS)

    So, Hyeon Seob; Park, Jun-Woo; Jung, Dae Ho; Ko, Kun Hee; Lee, Hosun

    2015-08-01

    We investigated the optical properties of amorphous and crystalline antimony (Sb)-doped tin dioxide (SnO2) thin films grown using the co-sputtering deposition method at room temperature. We used undoped and Sb-doped (8 wt. %) SnO2 targets. Varying the relative power ratio of the two targets, we controlled the Sb-composition of the SnO2:Sb thin films up to 2.3 at. % of Sb contents. Through annealing, the as-grown amorphous SnO2:Sb thin films were transformed to crystalline thin films. Dielectric functions were obtained from the measured ellipsometry angles, Ψ and Δ, using the Drude and parametric optical constant models. We determined the absorption coefficients and optical gap energies of the SnO2:Sb thin films from the dielectric functions. We found increasing optical gap energy with increasing Sb composition. Increases in the Drude tail amplitudes, a signature of free carrier concentrations, were found in annealed, crystalline thin films with increasing Sb composition. The increase in the optical gap energy with increasing Sb composition was mainly attributed to the Burstein-Moss effect. Using Hall effect measurements, we obtained Hall carrier concentrations (NHall) and electron Hall mobilities (μHall). The carrier concentrations and mobilities increased from 2.6 × 1019 cm-3 and 1.0 cm2/(V s) to 2.0 × 1020 cm-1 and 7.2 cm2/(V s), respectively, with increasing Sb contents. This result suggests that the nominally undoped SnO2 films are unintentionally n-type doped. Assuming that the NHall and optical carrier concentrations (Nopt) were the same, we obtained the effective masses of the SnO2:Sb thin films with increasing Sb compositions. The effective masses of the SnO2:Sb thin films increased from 0.245 m0 to 0.4 m0 with increasing Sb doping contents, and the nonparabolicity of the conduction band was estimated. We discussed the relation between the optical (μopt) and Hall (μHall) mobilities as a function of Sb contents and grain sizes.

  10. Optical properties of amorphous and crystalline Sb-doped SnO{sub 2} thin films studied with spectroscopic ellipsometry: Optical gap energy and effective mass

    SciTech Connect

    So, Hyeon Seob; Park, Jun-Woo; Jung, Dae Ho; Ko, Kun Hee; Lee, Hosun

    2015-08-28

    We investigated the optical properties of amorphous and crystalline antimony (Sb)-doped tin dioxide (SnO{sub 2}) thin films grown using the co-sputtering deposition method at room temperature. We used undoped and Sb-doped (8 wt. %) SnO{sub 2} targets. Varying the relative power ratio of the two targets, we controlled the Sb-composition of the SnO{sub 2}:Sb thin films up to 2.3 at. % of Sb contents. Through annealing, the as-grown amorphous SnO{sub 2}:Sb thin films were transformed to crystalline thin films. Dielectric functions were obtained from the measured ellipsometry angles, Ψ and Δ, using the Drude and parametric optical constant models. We determined the absorption coefficients and optical gap energies of the SnO{sub 2}:Sb thin films from the dielectric functions. We found increasing optical gap energy with increasing Sb composition. Increases in the Drude tail amplitudes, a signature of free carrier concentrations, were found in annealed, crystalline thin films with increasing Sb composition. The increase in the optical gap energy with increasing Sb composition was mainly attributed to the Burstein-Moss effect. Using Hall effect measurements, we obtained Hall carrier concentrations (N{sub Hall}) and electron Hall mobilities (μ{sub Hall}). The carrier concentrations and mobilities increased from 2.6 × 10{sup 19 }cm{sup −3} and 1.0 cm{sup 2}/(V s) to 2.0 × 10{sup 20 }cm{sup −1} and 7.2 cm{sup 2}/(V s), respectively, with increasing Sb contents. This result suggests that the nominally undoped SnO{sub 2} films are unintentionally n-type doped. Assuming that the N{sub Hall} and optical carrier concentrations (N{sub opt}) were the same, we obtained the effective masses of the SnO{sub 2}:Sb thin films with increasing Sb compositions. The effective masses of the SnO{sub 2}:Sb thin films increased from 0.245 m{sub 0} to 0.4 m{sub 0} with increasing Sb doping contents, and the nonparabolicity of the conduction band was estimated. We

  11. Quantitative determination of pharmaceutical drug formulations by near-infrared spectroscopic imaging.

    PubMed

    Kolomiets, O; Hoffmann, U; Geladi, P; Siesler, H W

    2008-11-01

    Over the last decade Fourier transform infrared (FT-IR) and near-infrared (NIR) spectroscopic imaging with focal plane array (FPA) detectors have proved powerful techniques for the rapid visualization of samples by a combination of spectroscopic and spatial information. Using these methods, selected sample areas can be analyzed with reference to the identification and localization of chemical species by FT-IR spectroscopy in the transmission or attenuated total reflection (ATR) mode and by NIR spectroscopy in diffuse reflection with a lateral resolution in the micrometer range. The present communication focuses on the quantitative determination of the active ingredient composition of a solid drug formulation by NIR spectroscopic imaging with a focal plane array detector and the results obtained are compared to the quantitative data obtained by conservative light-fiber NIR spectroscopic diffuse reflection measurements with a single-element detector. The communication also addresses the issue of penetration depth of NIR radiation into the investigated solid material.

  12. Raman and infrared spectroscopic study of turquoise minerals.

    PubMed

    Čejka, Jiří; Sejkora, Jiří; Macek, Ivo; Malíková, Radana; Wang, Lina; Scholz, Ricardo; Xi, Yunfei; Frost, Ray L

    2015-10-05

    Raman and infrared spectra of three well-defined turquoise samples, CuAl6(PO4)4(OH)8·4H2O, from Lavender Pit, Bisbee, Cochise county, Arizona; Kouroudaiko mine, Faleme river, Senegal and Lynch Station, Virginia were studied, interpreted and compared. Observed Raman and infrared bands were assigned to the stretching and bending vibrations of phosphate tetrahedra, water molecules and hydroxyl ions. Approximate O-H⋯O hydrogen bond lengths were inferred from the Raman and infrared spectra. No Raman and infrared bands attributable to the stretching and bending vibrations of (PO3OH)(2-) units were observed.

  13. Raman and infrared spectroscopic study of turquoise minerals

    NASA Astrophysics Data System (ADS)

    Čejka, Jiří; Sejkora, Jiří; Macek, Ivo; Malíková, Radana; Wang, Lina; Scholz, Ricardo; Xi, Yunfei; Frost, Ray L.

    2015-10-01

    Raman and infrared spectra of three well-defined turquoise samples, CuAl6(PO4)4(OH)8·4H2O, from Lavender Pit, Bisbee, Cochise county, Arizona; Kouroudaiko mine, Faleme river, Senegal and Lynch Station, Virginia were studied, interpreted and compared. Observed Raman and infrared bands were assigned to the stretching and bending vibrations of phosphate tetrahedra, water molecules and hydroxyl ions. Approximate O-H⋯O hydrogen bond lengths were inferred from the Raman and infrared spectra. No Raman and infrared bands attributable to the stretching and bending vibrations of (PO3OH)2- units were observed.

  14. IN SITU Analysis Of The Growth Of Semiconductor Materials By Phase Modulated Ellipsometry From UV To IR

    NASA Astrophysics Data System (ADS)

    Drevillon, Bernard

    1990-02-01

    Examples of applications of in situ spectroscopic polarization techniques (from UV to IR) to the study of the growth of semiconductor materials are presented. The high sensitivity of these in situ diagnostics is emphasized. In particular, the ability of kinetic ellipsometry in the UV range, to study interfaces involving reactive processes like plasma deposition, with submonolayer resolution, is described. In the UV-visible range, it is shown that reflectance-difference spectroscopy (RDS) allows the real-time characterization of crystalline III-V materials and heterojunctions. In the infrared, ellipsometry appears particularly well adapted for performing detailed analysis of the vibrational properties and the growth processes of amorphous thin films. Such sensitivity to film deposition mechanisms illustrates the capacity of real-time optical diagnostics for fundamental studies and in situ control process.

  15. Fourier transform infrared vibrational spectroscopic imaging: integrating microscopy and molecular recognition.

    PubMed

    Levin, Ira W; Bhargava, Rohit

    2005-01-01

    The recent development of Fourier transform infrared (FTIR) spectroscopic imaging has enhanced our capability to examine, on a microscopic scale, the spatial distribution of vibrational spectroscopic signatures of materials spanning the physical and biomedical disciplines. Recent activity in this emerging area has concentrated on instrumentation development, theoretical analyses to provide guidelines for imaging practice, novel data processing algorithms, and the introduction of the technique to new fields. To illustrate the impact and promise of this spectroscopic imaging methodology, we present fundamental principles of the technique in the context of FTIR spectroscopy and review new applications in various venues ranging from the physical chemistry of macromolecular systems to the detection of human disease.

  16. Near-infrared spectroscopic tissue imaging for medical applications

    DOEpatents

    Demos, Stavros; Staggs, Michael C.

    2006-12-12

    Near infrared imaging using elastic light scattering and tissue autofluorescence are explored for medical applications. The approach involves imaging using cross-polarized elastic light scattering and tissue autofluorescence in the Near Infra-Red (NIR) coupled with image processing and inter-image operations to differentiate human tissue components.

  17. Near-infrared spectroscopic tissue imaging for medical applications

    DOEpatents

    Demos; Stavros , Staggs; Michael C.

    2006-03-21

    Near infrared imaging using elastic light scattering and tissue autofluorescence are explored for medical applications. The approach involves imaging using cross-polarized elastic light scattering and tissue autofluorescence in the Near Infra-Red (NIR) coupled with image processing and inter-image operations to differentiate human tissue components.

  18. Near- and mid-infrared spectroscopic determination of algal composition

    USDA-ARS?s Scientific Manuscript database

    The objective of this study was to investigate the feasibility of using near-infrared reflectance spectroscopy (NIRS) and mid-infrared reflectance spectroscopy (MIRS) to determine the composition of algal samples. We assayed a set of algal biomass samples (n=117), collected from algae turf scrubber...

  19. Optical properties of TiAlC/TiAlCN/TiAlSiCN/TiAlSiCO/TiAlSiO tandem absorber coatings by phase-modulated spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Jyothi, J.; Biswas, A.; Sarkar, P.; Soum-Glaude, A.; Nagaraja, H. S.; Barshilia, Harish C.

    2017-07-01

    TiAlC, TiAlCN, TiAlSiCN, TiAlSiCO, and TiAlSiO layers of thicknesses 2.2 μm, 755, 491, 393, and 431 nm, respectively, were deposited on stainless steel, silicon, and glass substrates to study their refractive indices and extinction coefficients using the phase-modulated spectroscopic ellipsometry in the wavelength range of 300-1200 nm. Absorption coefficient of each layer was calculated from the extinction coefficient of the layer. The results indicate that the first three layers (i.e., TiAlC, TiAlCN, and TiAlSiCN) are absorbing in nature, while TiAlSiCO and TiAlSiO act as intermediate and antireflection layers. Subsequently, a tandem absorber of TiAlC/TiAlCN/TiAlSiCN/TiAlSiCO/TiAlSiO with layer thicknesses of 62, 20, 18, 16, and 27 nm, respectively, was deposited on stainless steel substrates to fabricate a spectrally selective coating with absorptance of 0.961 and emittance of 0.15 at 82 °C. The obtained refractive indices and extinction coefficients of the tandem absorber were used to simulate the reflectance of the deposited tandem absorber using SCOUT software. Simulated reflectance data of the tandem absorber showed a good agreement with the experimental data measured by UV-Vis-NIR and FTIR spectrophotometry. The angular dependence of the selective properties of the tandem absorber was studied by measuring the reflectance spectra of the tandem absorber at different incident angles.

  20. Infrared imaging-spectroscopic observations of Venus atmosphere

    NASA Astrophysics Data System (ADS)

    Ohtsuki, Shoko; Sagawa, Hideo; Ueno, Munetaka

    2005-01-01

    We present a report on our recent observations of Venus atmosphere which we have performed in infrared wavelength at Okayama Astrophysical Observatory. The data show important results on the CO distribution and on O2 IRA (0,0) 1.27μm airglow in the atmosphere. The infrared windows of the Venusian atmosphere are rather developing areas and will give us important information on the dynamics of Venus atmosphere.

  1. Spectroscopic ellipsometry of Zn(1-x)Cu(x)O thin films based on a modified sol-gel dip-coating technique.

    PubMed

    Al-Khanbashi, Hibah A; Shirbeeny, W; Al-Ghamdi, A A; Bronstein, Lyudmila M; Mahmoud, Waleed E

    2014-01-24

    Nanocrystalline Zn(1-x)Cu(x)O thin films (x=0, 0.01, 0.02, 0.03, 0.04 and 0.05) were synthesized by sol-gel dip-coating technique on a quartz substrate. These films were annealed at 350°C for 2 h. The X-ray diffraction showed a hexagonal crystal structure with high intensity peak for the (002) reflection plane indicating preferential growth along the c-axis of the crystal lattice. The peak position related to the (002) peak was shifted as a result of the copper ion incorporation, confirming the interstitial substitution of the zinc ions by the copper ions. This interstitial substitution leads to a decrease of an average crystallite size and lattice constants and an increase of the micro-strain up to 2 at.% of the copper amount. The surface morphology was explored by scanning electron microscopy which confirmed the homogenous distribution of nanoparticles in the deposited films along the quartz substrates. The energy dispersion X-ray spectroscopy revealed absence of impurities in the as-deposited films. The high resolution electron microscopy and selected area electron diffraction depicted that the films have polycrystalline nature. The film thickness and optical constants of the Zn(1-x)Cu(x)O thin films were estimated by fitting the spectroscopic ellipsometric data (ψ and Δ) using three different models. The refractive index was fitted using harmonic oscillator model from which the oscillator and the dispersive energies were found. The dielectric constant, dielectric loss, energy loss functions were also determined.

  2. Spectroscopic ellipsometry of Zn1-xCuxO thin films based on a modified sol-gel dip-coating technique

    NASA Astrophysics Data System (ADS)

    Al-Khanbashi, Hibah A.; Shirbeeny, W.; Al-Ghamdi, A. A.; Bronstein, Lyudmila M.; Mahmoud, Waleed E.

    2014-01-01

    Nanocrystalline Zn1-xCuxO thin films (x = 0, 0.01, 0.02, 0.03, 0.04 and 0.05) were synthesized by sol-gel dip-coating technique on a quartz substrate. These films were annealed at 350 °C for 2 h. The X-ray diffraction showed a hexagonal crystal structure with high intensity peak for the (0 0 2) reflection plane indicating preferential growth along the c-axis of the crystal lattice. The peak position related to the (0 0 2) peak was shifted as a result of the copper ion incorporation, confirming the interstitial substitution of the zinc ions by the copper ions. This interstitial substitution leads to a decrease of an average crystallite size and lattice constants and an increase of the micro-strain up to 2 at.% of the copper amount. The surface morphology was explored by scanning electron microscopy which confirmed the homogenous distribution of nanoparticles in the deposited films along the quartz substrates. The energy dispersion X-ray spectroscopy revealed absence of impurities in the as-deposited films. The high resolution electron microscopy and selected area electron diffraction depicted that the films have polycrystalline nature. The film thickness and optical constants of the Zn1-xCuxO thin films were estimated by fitting the spectroscopic ellipsometric data (ψ and Δ) using three different models. The refractive index was fitted using harmonic oscillator model from which the oscillator and the dispersive energies were found. The dielectric constant, dielectric loss, energy loss functions were also determined.

  3. Fourier transform infrared spectroscopic analysis of cell differentiation

    NASA Astrophysics Data System (ADS)

    Ishii, Katsunori; Kimura, Akinori; Kushibiki, Toshihiro; Awazu, Kunio

    2007-02-01

    Stem cells and its differentiations have got a lot of attentions in regenerative medicine. The process of differentiations, the formation of tissues, has become better understood by the study using a lot of cell types progressively. These studies of cells and tissue dynamics at molecular levels are carried out through various approaches like histochemical methods, application of molecular biology and immunology. However, in case of using regenerative sources (cells, tissues and biomaterials etc.) clinically, they are measured and quality-controlled by non-invasive methods from the view point of safety. Recently, the use of Fourier Transform Infrared spectroscopy (FT-IR) has been used to monitor biochemical changes in cells, and has gained considerable importance. The objective of this study is to establish the infrared spectroscopy of cell differentiation as a quality control of cell sources for regenerative medicine. In the present study, as a basic study, we examined the adipose differentiation kinetics of preadipocyte (3T3-L1) and the osteoblast differentiation kinetics of bone marrow mesenchymal stem cells (Kusa-A1) to analyze the infrared absorption spectra. As a result, we achieved to analyze the adipose differentiation kinetics using the infrared absorption peak at 1739 cm-1 derived from ester bonds of triglyceride and osteoblast differentiation kinetics using the infrared absorption peak at 1030 cm-1 derived from phosphate groups of calcium phosphate.

  4. Laser Raman and infrared spectroscopic studies of molecular systems: Structural analysis of some clathrate compounds

    NASA Astrophysics Data System (ADS)

    Akyuz, S.

    1990-09-01

    The structural analyses of some molecular systems, namely clathrates, depending on the laser Raman and infrared spectroscopic studies are reported. The following subject areas are covered: Raman effect; Raman spectroscopy; IR spectroscopy; mutual exclusion principle; vibrational spectra of the polymeric layers; and fundamental vibrations of pyrazine molecules.

  5. Infrared Spectroscopic Investigation on CH Bond Acidity in Cationic Alkanes

    NASA Astrophysics Data System (ADS)

    Matsuda, Yoshiyuki; Xie, Min; Fujii, Asuka

    2016-06-01

    We have demonstrated large enhancements of CH bond acidities in alcohol, ether, and amine cations through infrared predissociation spectroscopy based on the vacuum ultraviolet photoionization detection. In this study, we investigate for the cationic alkanes (pentane, hexane, and heptane) with different alkyl chain lengths. The σ electrons are ejected in the ionization of alkanes, while nonbonding electrons are ejected in ionization of alcohols, ethers, and amines. Nevertheless, the acidity enhancements of CH in these cationic alkanes have also been demonstrated by infrared spectroscopy. The correlations of their CH bond acidities with the alkyl chain lengths as well as the mechanisms of their acidity enhancements will be discussed by comparison of infrared spectra and theoretical calculations.

  6. Infrared Spectroscopic Study for the Hydrated Clusters of Pentane Cation

    NASA Astrophysics Data System (ADS)

    Endo, Tomoya; Matsuda, Yoshiyuki; Fujii, Asuka

    2016-06-01

    We performed infrared predissociation spectroscopy of size-selected pentane-water cluster cations, [pentane-(H2O)n]+, n=1-3, generated through the vacuum-ultraviolet photoionization. In the infrared spectra of the di- and tri-hydrated clusters, there appear broad features which spread to the lower frequency region from 2800 cm-1. These broad features are assigned to vibrations of a proton, which is transferred from CH of the pentane cation to the water molecules. These results indicate that the pentane cation has high proton donor ability. We will discuss these results based on theoretical conputations.

  7. Optical-infrared colors of a complete sample of field galaxies with spectroscopic redshifts.

    NASA Astrophysics Data System (ADS)

    Bershady, M.; Hereld, M.; Kron, R.; Koo, D.

    The authors investigate the optical-infrared color distribution of 135 optically selected field galaxies in the Koo-Kron redshift survey. All objects have UJBFNK photometry with spectroscopic redshifts ranging from 0.018 to 0.35 (a look back time of 4.5 h50-1Gyr, q0 = 0). The distribution in N-K vs z is explored with the aid of the K band luminosity and optical-infrared multi-color distributions. These results provide the basis for future tests of galaxy evolution models of optical and near-infrared light.

  8. Mid-infrared laser-spectroscopic sensing of chemical species

    PubMed Central

    Sigrist, Markus W.

    2014-01-01

    This letter reports on mid-infrared laser-based detection and analysis of chemical species. Emphasis is put on broadly tunable laser sources and sensitive detection schemes. Selected examples from our lab illustrate the performance and potential of such systems in various areas including environmental and medical sensing. PMID:26257952

  9. ISO Far-Infrared Spectroscopic Observations of Jupiter

    NASA Astrophysics Data System (ADS)

    Burgdorf, M. J.; Encrenaz, Th.; Feuchtgruber, H.; Davis, G. R.; Fouchet, Th.; Gautier, D.; Lellouch, E.; Orton, G. S.; Sidher, S. D.

    2001-07-01

    We present the far-infrared spectrum of Jupiter that was measured with the Short and Long Wavelength Spectrometers (SWS and LWS) aboard the Infrared Space Observatory (ISO). The region between 38 and 44 microns was observed in grating mode, where the SWS provides a spectral resolution of about 1300. For longer waves up to 197 microns the LWS-FP (Fabry-Perot) was used to achieve a resolution of several thousand. The observations were made between 23 and 26 May 1997 during ISO's revolutions 554, 556 and 557. The Jovian spectrum in the far-infrared is compared to an atmospheric radiative transfer model using expected values for the vertical profiles of the atmospheric constituents. Rotational transitions of ammonia and phosphine are responsible for the absorption features observed: Strong ammonia absorption manifolds are obvious against the background continuum slope, appearing at 39, 42, 46, 51, 56, 63, 72, 84, 100 and 125 microns in both the data and the model. Also PH3 features are present at the expected wavelengths of 113 and 141 microns in both the data and the model. This is the first time that most of these far-infrared features have been detected. The ISO observations are therefore of interest for the preparation of the planned submillimeter studies of the atmospheres of the Jovian planets with FIRST.

  10. Structural and bonding environments derived from infrared spectroscopic studies

    USDA-ARS?s Scientific Manuscript database

    Infrared spectroscopy, generally in the form of FTIR, has been used to characterize the organic matter in animal manure and relevant materials or fractions. The FT-IR spectra of most manure samples resemble the Type III spectra of humic substances with strong aliphatic characters. However, the absor...

  11. Mid-infrared spectroscopic analysis of saccharides in aqueous solutions with sodium chloride.

    PubMed

    Kanou, Mikihito; Kameoka, Takaharu; Suehara, Ken-Ichiro; Hashimoto, Atsushi

    2017-04-01

    The infrared spectral characteristics of three different types of disaccharides (trehalose, maltose, and sucrose) and four different types of monosaccharides (glucose, mannose, galactose, and fructose) in aqueous solutions with sodium chloride (NaCl) were determined. The infrared spectra were obtained using the FT-IR/ATR method and the absorption intensities respected the interaction between the saccharide and water with NaCl were determined. This study also focused on not only the glycosidic linkage position and the constituent monosaccharides, but also the concentration of the saccharides and NaCl and found that they have a significant influence on the infrared spectroscopic characterization of the disaccharides in an aqueous solution with NaCl. The absorption intensities representing the interaction between a saccharide and water with NaCl were spectroscopically determined. Additionally, the applications of MIR spectroscopy to obtain information about saccharide-NaCl interactions in foods and biosystems were suggested.

  12. Palm-size wide-field Fourier spectroscopic imager with uncooled infrared microbolometer arrays for smartphone

    NASA Astrophysics Data System (ADS)

    Kawashima, Natsumi; Suzuki, Yo; Qi, Wei; Hosono, Satsuki; Saito, Tsubasa; Ogawa, Satoshi; Sato, Shun; Fujiwara, Masaru; Nishiyama, Akira; Wada, Kenji; Tanaka, Naotaka; Ishimaru, Ichiro

    2015-03-01

    We proposed the imaging-type 2-dimensional Fourier spectroscopy that is a near-common-path interferometer with strong robustness against mechanical vibrations. We introduced the miniature uncooled infrared microbolometer arrays for smartphone (e.g. product name: FILR ONE price: around 400USD). And we constructed the phase-shifter with the piezo impact drive mechanism (maker: Technohands.co.Ltd., stroke: 4.5mm, resolution: 0.01μm, size: 20mm, price: around 800USD). Thus, we realized the palm-size mid-infrared spectroscopic imager [size: L56mm×W69mm×H43mm weight: 500g]. And by using wide-angle lens as objective lens, the proposed method can obtain the wide-field 2- dimensional middle-infrared (wavelength: 7.5-13.5[μm]) spectroscopic imaging of radiation lights emitted from human bodies itself

  13. A NEAR-INFRARED SPECTROSCOPIC SURVEY OF CLASS I PROTOSTARS

    SciTech Connect

    Connelley, Michael S.; Greene, Thomas P.

    2010-11-15

    We present the results of a near-IR spectroscopic survey of 110 Class I protostars observed from 0.80 {mu}m to 2.43 {mu}m at a spectroscopic resolution of R = 1200. This survey is unique in its selection of targets from the whole sky, its sample size, wavelength coverage, depth, and sample selection. We find that Class I objects exhibit a wide range of lines and the continuum spectroscopic features. Eighty-five percent of Class I protostars exhibit features indicative of mass accretion, and we found that the veiling excess, CO emission, and Br {gamma} emission are closely related. We modeled the spectra to estimate the veiling excess (r{sub k} ) and extinction to each target. We also used near-IR colors and emission line ratios, when available, to also estimate extinction. In the course of this survey, we observed the spectra of 10 FU Orionis-like objects, including 2 new ones, as well as 3 Herbig Ae-type stars among our Class I young stellar objects. We used photospheric absorption lines, when available, to estimate the spectral type of each target. Although most targets are late-type stars, there are several A- and F-type stars in our sample. Notably, we found no A or F class stars in the Taurus-Auriga or Perseus star-forming regions. There are several cases where the observed CO and/or water absorption bands are deeper than expected from the photospheric spectral type. We find a correlation between the appearance of the reflection nebula, which traces the distribution of material on very large scales, and the near-IR spectrum, which probes smaller scales. All of the FU Orionis-like objects are associated with reflection nebulae. The spectra of the components of spatially resolved protostellar binaries tend to be very similar. In particular both components tend to have similar veiling and H{sub 2} emission, inconsistent with random selection from the sample as a whole. There is a strong correlation between [Fe II] and H{sub 2} emission, supporting previous

  14. Visible and Near Infrared Spectroscopic and Spectrophotometric Observations of NEOs

    NASA Astrophysics Data System (ADS)

    de Leon Cruz, J.; Licandro, J.; Serra-Ricart, M.

    2003-05-01

    In august 2002 we started an observational program to obtain physical information of a significant number of Near Earth Objects by means of simultaneous visible and near infrared spectroscopy and spectrophotometry using telescope facilities of Teide and El Roque de los Muchachos Observatories (Canary Islands, Spain). Near infrared spectroscopy is done using the 3.5-m TNG telescope with the NICS camera-spectrograph and its low resolution Amici prism disperser (Licandro et al. 2001, A&A 373, 29L). Visible spectroscopy is done using the 2.5-m NOT telescope with the ALFOSC camera-spectrograph. At present we have some spectra taken with both telescopes, and 4 nights schedulled for simultaneous observations next semester. Simultaneous visible and near-infrared photometry is done using the CCD camera attached to the 80-cm IAC80 telescope and B,V,R,I filters, and the 1.5-m Carlos Sanchez Telescope with CAIN camera (Nicmos 256x256 array) and J,H,K filters. Until this moment we have spent almost 50 nights for the photometric program, and schedulled 4 nights per month next semester. Our spectral analysis at visible wavelengths of these objects uses some of the techniques and taxonomic system developed by Bus (1999, PhD thesis), studying the presence or absence of specific spectral features in their reflectance spectra. In addition, near infrared spectra obtained for a number of NEOs enhances the compositional interpretation of our sample. Broad band spectrophotometric colors also provide low resolution spectra that can be compared with taxonomic classes defined by Tholen (1984, PhD Thesis). We also compare our spectral data with laboratory measurements of meteorites (Gaffey 1976, JGR 81,905) in order to stablish a possible link between main belt asteroids, near-Earth objects and meterorites, and to detect the effects of space weathering in the surface composition of our objects. A description of the program and preliminary results is presented.

  15. Infrared reflection-absorption spectroscope using thin film structures

    NASA Astrophysics Data System (ADS)

    Finke, S. J.; Schrader, G. L.

    Infrared reflection-absorption spectroscopy (IRRAS) has been used extensively in the study of adsorbates and thin layers on metal surfaces, but little work has been performed on non-metals due to the low sensitivity which results when these materials are used. In this work, thin film structures consisting of a thin layer of a semiconductor (silicon) on a metal (copper) surface are used to increase the sensitivity of the technique for examining layers of poly(methylmethacrylate).

  16. Jet Fuel Thermal Stability Investigations Using Ellipsometry

    NASA Technical Reports Server (NTRS)

    Nash, Leigh; Vasu, Subith S.; Klettlinger, Jennifer Lindsey

    2017-01-01

    Jet fuels are typically used for endothermic cooling in practical engines where their thermal stability is very important. In this work the thermal stability of Sasol IPK (a synthetic jet fuel) with varying levels of naphthalene has been studied on stainless steel substrates using spectroscopic ellipsometry in the temperature range 385-400 K. Ellipsometry is an optical technique that measures the changes in a light beam’s polarization and intensity after it reflects off of a thin film to determine the film’s thickness and optical properties. All of the tubes used were rated as thermally unstable by the color standard portion of the Jet Fuel Thermal Oxidation Test, and this was confirmed by the deposit thicknesses observed using ellipsometry. A new amorphous model on a stainless steel substrate was used to model the data and obtain the results. It was observed that, as would be expected, increasing the temperature of the tube increased the overall deposit amount for a constant concentration of naphthalene. The repeatability of these measurements was assessed using multiple trials of the same fuel at 385 K. Lastly, the effect of increasing the naphthalene concentration in the fuel at a constant temperature was found to increase the deposit thickness.In conclusion, ellipsometry was used to investigate the thermal stability of jet fuels on stainless steel substrate. The effects of increasing temperature and addition of naphthalene on stainless steel tubes with Sasol IPK fuel were investigated. It was found, as expected, that increasing temperature lead to an increase in deposit thickness. It wasAmerican Institute of Aeronautics and Astronautics6also found that increasing amounts of naphthalene increased the maximum deposit thickness. The repeatability of these measurements was investigated using multiple tests at the same conditions. The present work provides as a better quantitative tool compared to the widely used JFTOT technique. Future work will expand on the

  17. [Infrared spectroscopic analysis of Guilin watermelon frost products].

    PubMed

    Huang, Dong-lan; Chen, Xiao-kang; Xu, Yong-qun; Sun, Su-qin; Zhou, Qun; Lu, Wen-guan

    2012-08-01

    The objective of the present study is to analyze different products of Guilin watermelon frost by Fourier transform infrared spectroscopy (FTIR), second derivative infrared spectroscopy and two-dimensional correlation spectroscopy (2D-IR) under thermal perturbation. The structural information of the samples indicates that samples from the same factory but of different brands had some dissimilarities in the IR spectra, and the type and content of accessories of them were different compared with conventional IR spectra of samples, peaks at 638 and 616 cm(-1) all arise from anhydrous sodium sulfate in watermelon frost spray and watermelon frost capsule; the characteristic absorption peaks of the sucrose, dextrin or other accessories can be seen clearly in the spectra of watermelon frost throat-clearing buccal tablets, watermelon frost throat tablets and watermelon frost lozenge. And the IR spectra of watermelon frost lozenge is very similar to the IR spectra of sucrose, so it can be easily proved that the content of sucrose in watermelon frost lozenge is high. In the 2D-IR correlation spectra, the samples presented the differences in the position, number and relative intensity of autopeaks and correlation peak clusters. Consequently, the macroscopical fingerprint characters of FTIR, second derivative infrared spectra and 2D-IR spectra can not only provide the information about main chemical constituents in medical materials, but also analyze and identify the type and content of accessories in Guilin watermelon frost. In conclusion, the multi-steps IR macro-fingerprint method is rapid, effective, visual and accurate for pharmaceutical research.

  18. Infrared spectroscopic investigations of cationic ethanol, propanol, and butanol

    NASA Astrophysics Data System (ADS)

    Matsuda, Yoshiyuki; Harigaya, Hiroyuki; Xie, Min; Takahashi, Kaito; Fujii, Asuka

    2015-11-01

    Infrared spectroscopy of the alcohol cations of ethanol, propanol, and butanol was performed to investigate their structures and hyperconjugation mechanisms. In the ethanol cation, the Csbnd C bond hyperconjugates with the singly occupied molecular orbital (SOMO) at the oxygen atom, so that the Csbnd C bond weakens and the bond length elongates. Multiple hyperconjugations among SOMO, the Csbnd C bond, and the end Csbnd H bond occur in the propanol cation and enhance the acidity of the Csbnd H bond through the delocalization of its bonding σ electron. The butanol cation forms the oxonium-type structure through the proton transfer from the terminal CH bond.

  19. Infrared spectroscopic investigations of the compensatoin effect in ceramic materials

    SciTech Connect

    Vanina, E.A.; Kostyukov, N.S.

    1995-09-01

    The objective in this paper was to investigate by means of infrared spectroscopy samples of M-23 electrical porcelain ceramic after irradiation in a BOR-60 reactor with a neutron fluence of 6.5 x 10(exp 21)/square centimeter and isothermal annealing at 700 C and 1000 C for 10 hours. The work was performed on an IKS-29 spectrophotometer using samples in the form of a suspension in vasoline oil and pressed tablets with Potassium Bromide. The investigations were performed after the irradiated samples were allowed to stand for 7 years. It was found that partial amorphization of the quartz occurred.

  20. Spitzer mid-infrared spectroscopic observations of planetary nebulae

    NASA Astrophysics Data System (ADS)

    Mata, H.; Ramos-Larios, G.; Guerrero, M. A.; Nigoche-Netro, A.; Toalá, J. A.; Fang, X.; Rubio, G.; Kemp, S. N.; Navarro, S. G.; Corral, L. J.

    2016-06-01

    We present Spitzer Space Telescope archival mid-infrared (mid-IR) spectroscopy of a sample of 11 planetary nebulae (PNe). The observations, acquired with the Spitzer Infrared Spectrograph (IRS), cover the spectral range 5.2-14.5 μm that includes the H2 0-0 S(2) to S(7) rotational emission lines. This wavelength coverage has allowed us to derive the Boltzmann distribution and calculate the H2 rotational excitation temperature (Tex). The derived excitation temperatures have consistent values ≃900 ± 70 K for different sources despite their different structural components. We also report the detection of mid-IR ionic lines of [Ar III], [S IV], and [Ne II] in most objects, and polycyclic aromatic hydrocarbon features in a few cases. The decline of the [Ar III]/[Ne II] line ratio with the stellar effective temperature can be explained either by a true neon enrichment or by high density circumstellar regions of PNe that presumably descend from higher mass progenitor stars.

  1. [Infrared spectroscopic study on leaf senescence of evergreen tree].

    PubMed

    Li, Lun; Zhou, Xiang-Ping; Liu, Gang; Zhang, Li; Ou, Quan-Hong; Hao, Jian-Ming

    2013-02-01

    In order to investigate plant physiological process of leaf senescence and aging, Fourier transform infrared (FTIR) spectroscopy was used to study the young, mature, and old yellow leaves from seven species of evergreen trees. The spectra of the leaves from different growing period are different in the region of 1 800-700 cm(-1). The absorption ratios A1 070/A2 927, A1 070/A1 160 were used to evaluate the relative changes of polysaccharides, and A1 318/A2 922 was used to estimate the change of calcium oxalate during leaf senescence. Decomposition and curve-fitting analysis was performed in the region of 1 800 -1 500 cm(-1). The sub-band absorption ratio H1 650/H1 740 was used to evaluate the relative changes of protein in the leaves. The results show that the accumulation and mobilization of polysaccharides, protein, and calcium oxalate during leaf growing period were different in different plant species. This study demonstrates the potential of mid-infrared spectroscopy for investigation of plants senescence, as well as physiological and biochemical changes of plants.

  2. Infrared spectroscopic probing of dimethylamine clusters in an Ar matrix.

    PubMed

    Li, Siyang; Kjaergaard, Henrik G; Du, Lin

    2016-02-01

    Amines have many atmospheric sources and their clusters play an important role in aerosol nucleation processes. Clusters of a typical amine, dimethylamine (DMA), of different sizes were measured with matrix isolation IR (infrared) and NIR (near infrared) spectroscopy. The NIR vibrations are more separated and therefore it is easier to distinguish different sizes of clusters in this region. The DMA clusters, up to DMA tetramer, have been optimized using density functional methods, and the geometries, binding energies and thermodynamic properties of DMA clusters were obtained. The computed frequencies and intensities of NH-stretching vibrations in the DMA clusters were used to interpret the experimental spectra. We have identified the fundamental transitions of the bonded NH-stretching vibration and the first overtone transitions of the bonded and free NH-stretching vibration in the DMA clusters. Based on the changes in vibrational intensities during the annealing processes, the growth of clusters was clearly observed. The results of annealing processes indicate that DMA molecules tend to form larger clusters with lower energies under matrix temperatures, which is also supported by the calculated reaction energies of cluster formation. Copyright © 2015. Published by Elsevier B.V.

  3. Infrared spectroscopic characteristics of normal and malignant colonic epithelium

    NASA Astrophysics Data System (ADS)

    Krupnik, Eduardo; Jackson, Michael; Bird, Ranjana P.; Smith, Ian C. P.; Mantsch, Henry H.

    1998-04-01

    IR spectroscopy is being widely used to study the biochemical changes associated with cancer. In particular, based upon the hypothesis that biochemical changes associated with cancer precede morphological manifestations of the disease, IR spectroscopy is being evaluated as a potential early diagnostic and prognostic tool. In the current study, IR spectroscopy was applied to the study of colon tissue from rats treated with the specific colon carcinogen azoxymethane, to determine whether tumor induction was associated with identifiable spectroscopic changes in the colon. Characteristic spectra were found for each layer of the colon. Spectra of normal-appearing mucosa and tumors form treated animals then compared to spectra of control mucosa. Differences between tumors and control mucosa were apparent, indicating changes in cellular biochemistry associated with tumor development. In particular, differences in absorptions attributed to nucleic acids were seen, indicating alterations in the structure of cellular DNA in malignant and carcinogen treated tissues. Interestingly, spectra of carcinogen treated rates exhibit characteristics intermediate between those of normal mucosa and tumors. Application of multivariate analysis allowed non-subjective classification of the spectra into three distinct classes with and accuracy of 86.7 percent. The separate classification of control and treated mucosa suggests that IR spectroscopy, when combined with the appropriate classifier, can indeed detect biochemical changes in tissue before physical manifestation of the disease process.

  4. Raman and infrared spectroscopic study of kamphaugite-(Y)

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo

    2015-05-01

    We have studied the carbonate mineral kamphaugite-(Y)(CaY(CO3)2(OH)·H2O), a mineral which contains yttrium and specific rare earth elements. Chemical analysis shows the presence of Ca, Y and C. Back scattering SEM appears to indicate a single pure phase. The vibrational spectroscopy of kamphaugite-(Y) was obtained using a combination of Raman and infrared spectroscopy. Two distinct Raman bands observed at 1078 and 1088 cm-1 provide evidence for the non-equivalence of the carbonate anion in the kamphaugite-(Y) structure. Such a concept is supported by the number of bands assigned to the carbonate antisymmetric stretching mode. Multiple bands in the ν4 region offers further support for the non-equivalence of carbonate anions in the structure. Vibrational spectroscopy enables aspects of the structure of the mineral kamphaugite-(Y) to be assessed.

  5. Thin film characterization using spectroscopic ellipsometry

    NASA Technical Reports Server (NTRS)

    Alterovitz, Samuel A.

    1990-01-01

    The application of the multiple angle and wavelength (MAW) technique to measure the dielectric function of semiconducting films is discussed. This technique evaluates unambiguously the complex dielectric function, epsilon (E), of the film without any pre-assumptions. In some cases the effective medium approximation (EMA) was used to determine the volume fraction of the film components. Application of the MAW technique to several semiconducting films was published previously. Different applications and examples are given, including metal and insulator films.

  6. High-definition Fourier transform infrared spectroscopic imaging of breast tissue

    NASA Astrophysics Data System (ADS)

    Leslie, L. Suzanne; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2015-03-01

    Breast cancer diagnosis relies on staining serial sections of a biopsy in a process that can be time intensive and costly. Fourier transform infrared imaging (FT-IR) is a non-destructive, label-free chemical imaging technique that uses the vibrational structure of the biological molecules of the sample to provide contrast for images at any absorption peak in the mid-infrared. The full potential of spectroscopic imaging has been limited by the spatial resolution provided by most commercial instruments. By increasing the magnification and numerical aperture of the microscope, image pixel sizes on the order of 1.1 micron can be achieved, allowing HD FT-IR spectroscopic imaging to provide high quality images that could aid in histopathology, diagnosis, and studies of breast cancer progression.

  7. Spectroscopic research on infrared emittance of coal ash deposits

    SciTech Connect

    Saljnikov, Aleksandar; Komatina, Mirko; Gojak, Milan; Vucicevic, Biljana; Goricanec, Darko; Stevanovic, Zoran

    2009-11-15

    This paper deals with thermal radiation characteristics of ash deposits on a pulverized coal combustion boiler of an electric power plant. Normal emittance spectra in the near to medium infrared (2.5-25 {mu}m) region and total normal emittances were measured on four kinds of ground ash deposits. Measurements were conducted in the 570-1460 K temperature range which is common for boiler furnaces, by both heating and cooling the ash samples, with the aim to study the effect of their thermal history. Dependence of emittance on wavelength, temperature and chemical composition was studied, too. Samples were tested for transparency (opacity) to verify the accuracy of results. It was determined that the thicknesses used for the ash powders are opaque for infrared radiation for thicknesses in the order of a millimeter. Tests have shown that spectral emittance increases with an increase of wavelength with a characteristic pattern common for all samples. Spectral normal emittance increases strongly with temperature at shorter wavelengths and remains high and unchanged at longer ones. Emittance spectra are not very sensitive to chemical composition of ashes especially beyond {lambda} {approx} 5 {mu}m. With an increase of temperature, total emittance of the powdered sample decreases to a minimum value around 1200 K. Further temperature rise induces an increase of total emittance due to sintering in the ash. On cooling, the emittance increases monotonically following the hysteresis. Quantitative directions for evaluating thermal radiation characteristics of ash deposits for the merits of the safety design of boiler furnaces were proposed. That comprises correlating the experimentally obtained emittance spectra with curves of simple analytical form, i.e., a continuous function of minimum emittance vs. wavelength. The proposed method can be extended to other specimens from the same furnace and used to determine correlations for thermal calculation of old and design of new furnaces

  8. Fourier Transform Infrared and Resonance Raman Spectroscopic Studies of Bacteriorhodopsin.

    NASA Astrophysics Data System (ADS)

    Earnest, Thomas Nixon

    Fourier transform infrared and resonance Raman spectroscopy were used to investigate the structure and function of the light-activated, transmembrane proton pump, bacteriorhodopsin, from the purple membrane of Halobacterium halobium. Bacteriorhodopsin (bR) is a 27,000 dalton integral membrane protein consisting of 248 amino acids with a retinylidene chromophore. Absorption of a photon leads to the translocation of one or two protons from the inside of the cell to the outside. Resonance Raman spectroscopy allows for the study of the configuration of retinal in bR and its photointermediates by the selective enhancement of vibrational modes of the chromophore. This technique was used to determine that the chromophore is attached to lysine-216 in both the bR _{570} and the M _{412} intermediates. In bR with tyrosine-64 selectively nitrated or aminated, the chromophore appears to have the same configuration in that bR _{570} (all- trans) and M _{412} (13- cis) states as it does in unmodified bR. Polarized Fourier transform infrared spectroscopy (FTIR) permits the study of the direction of transition dipole moments arising from molecular vibrations of the protein and the retinal chromophore. The orientation of alpha helical and beta sheet components was determined for bR with the average helical tilt found to lie mostly parallel to the membrane normal. The beta sheet structures also exhibit an IR linear dichroism for the amide I and amide II bands which suggest that the peptide backbone is mostly perpendicular to the membrane plane although it is difficult to determine whether the bands originate from sheet or turn components. The orientation of secondary structure components of the C-1 (residues 72-248) and C-2 (residues 1-71) fragments were also investigated to determine the structure of these putative membrane protein folding intermediates. Polarized, low temperature FTIR -difference spectroscopy was then used to investigate the structure of bR as it undergoes

  9. Fourier transform infrared spectroscopic study of intact cells of the nitrogen-fixing bacterium Azospirillum brasilense

    NASA Astrophysics Data System (ADS)

    Kamnev, A. A.; Ristić, M.; Antonyuk, L. P.; Chernyshev, A. V.; Ignatov, V. V.

    1997-06-01

    The data of Fourier transform infrared (FTIR) spectroscopic measurements performed on intact cells of the soil nitrogen-fixing bacterium Azospirillum brasilense grown in a standard medium and under the conditions of an increased metal uptake are compared and discussed. The structural FTIR information obtained is considered together with atomic absorption spectrometry (AAS) data on the content of metal cations in the bacterial cells. Some methodological aspects concerning preparation of bacterial cell samples for FTIR measurements are also discussed.

  10. Near infrared spectroscopic evaluation of water in hyaline cartilage.

    PubMed

    Padalkar, M V; Spencer, R G; Pleshko, N

    2013-11-01

    In diseased conditions of cartilage such as osteoarthritis, there is typically an increase in water content from the average normal of 60-85% to greater than 90%. As cartilage has very little capability for self-repair, methods of early detection of degeneration are required, and assessment of water could prove to be a useful diagnostic method. Current assessment methods are either destructive, time consuming, or have limited sensitivity. Here, we investigated the hypotheses that non-destructive near infrared spectroscopy (NIRS) of articular cartilage can be used to differentiate between free and bound water, and to quantitatively assess water content. The absorbances centered at 5200 and 6890 cm(-1) were attributed to a combination of free and bound water, and to free water only, respectively. The integrated areas of both absorbance bands were found to correlate linearly with the absolute water content (R = 0.87 and 0.86) and with percent water content (R = 0.97 and 0.96) of the tissue. Partial least square models were also successfully developed and were used to predict water content, and percent free water. These data demonstrate that NIRS can be utilized to quantitatively determine water content in articular cartilage, and may aid in early detection of degenerative tissue changes in a laboratory setting, and with additional validations, possibly in a clinical setting.

  11. Infrared spectroscopic study of carrier scattering in gated CVD graphene

    NASA Astrophysics Data System (ADS)

    Yu, Kwangnam; Kim, Jiho; Kim, Joo Youn; Lee, Wonki; Hwang, Jun Yeon; Hwang, E. H.; Choi, E. J.

    2016-12-01

    We measured Drude absorption of gated CVD graphene using far-infrared transmission spectroscopy and determined the carrier scattering rate (γ ) as a function of the varied carrier density (n ). The n -dependent γ (n ) was obtained for a series of conditions systematically changed as (10 K, vacuum) → (300 K, vacuum) → (300 K, ambient pressure), which reveals that (1) at low-T, charged impurity (=A /√{n } ) and short-range defect (=B √{n } ) are the major scattering sources which constitute the total scattering γ =A /√{n }+B √{n } , (2) among various kinds of phonons populated at room-T , surface polar phonon of the SiO2 substrate is the dominantly scattering source, and (3) in air, the gas molecules adsorbed on graphene play a dual role in carrier scattering as charged impurity center and resonant scattering center. We present the absolute scattering strengths of those individual scattering sources, which provides the complete map of scattering mechanism of CVD graphene. This scattering map allows us to find out practical measures to suppress the individual scatterings, the mobility gains accompanied by them, and finally the ultimate attainable carrier mobility for CVD graphene.

  12. Fourier Transform Microwave and Infrared Spectroscopic Investigation of Propiolactone

    NASA Astrophysics Data System (ADS)

    Chen, Ziqiu; van Wijngaarden, Jennifer

    2009-06-01

    The pure rotational spectrum of the four-membered ester ring propiolactone (C{_3}H{_4}O{_2}) has been measured in a supersonic jet between 7 and 22 GHz using Fourier transform microwave (FTMW) spectroscopy. For the normal isotopologue, a total of 19 a- and b-type transitions have been recorded. Fifteen transitions due to three different ^{13}C isotopologues have also been observed. The microwave spectrum was analyzed to obtain an improved set of ground state rotational constants in comparison to earlier microwave experiments. The new set of rotational parameters was used to predict the rovibrational band structure of the lowest frequency modes of propiolactone. A total of 12 vibrational band origins have been observed between 400 and 1500 cm^{-1} using the far infrared beamline of the Canadian Light Source coupled to a Bruker IFS125HR spectrometer. The spectra were recorded with a resolution of 0.000969 cm^{-1} and although the intensities of the bands vary, 9 bands are of sufficient quality for complete rovibrational assignment. The progress of the assignment of this rich spectrum will be discussed. D. W. Boone, C O. Britt and J. E. Boggs J. Chem. Phys. 43 (1190), 1965.

  13. Near-Infrared Spectroscopic Study of V1647 Ori

    NASA Astrophysics Data System (ADS)

    Brittain, Sean D.; Rettig, Terrence W.; Simon, Theodore; Gibb, Erika L.; Liskowsky, Joseph

    2010-01-01

    We present new high-resolution infrared echelle spectra of V1647 Ori, the young star that illuminates McNeil's nebula. From the start, V1647 Ori has been an enigmatic source that has defied classification, in some ways resembling eruptive stars of the FUor class and in other respects the EXor variables. V1647 Ori underwent an outburst in 2003 before fading back to its pre-outburst brightness in 2006. In 2008, it underwent a new outburst. In this paper, we present high-resolution K-band and M-band spectra from the W. M. Keck Observatory that were acquired during the 2008 outburst. We compare the spectra to spectra acquired during the previous outburst and quiescent phases. We find that the luminosity and full width at half maximum power of Br γ increased as the star has brightened and decreased when the star faded, indicating that these phases are driven by variations in the accretion rate. We also show that the temperature of the CO emission has varied with the stellar accretion rate, confirming suggestions from modeling of the heating mechanisms of the inner disk. Finally, we find that the lowest energy blueshifted CO absorption lines originally reported in 2007 are no longer detected. The absence of these lines confirms the short-lived nature of the outflow launched at the start of the quiescent phase in 2006.

  14. Near-infrared spectroscopic approach to assess tissue viability following a thermal injury

    NASA Astrophysics Data System (ADS)

    Leonardi, Lorenzo; Sowa, Michael G.; Payette, Jeri R.; Hewko, Mark D.; Schattka, Bernhard J.; Matas, Anna; Mantsch, Henry H.

    2001-07-01

    A recurrent problem in the assessment of thermal injuries is the ability to accurately identify the depth and extent of injury. Generally, the depth of a burn injury determines and is inversely related to the ability of the skin to restore and regenerate itself. Burns involve damage to the dermis in varying amounts, reducing the dermal blood supply and altering the skin hemodynamics. Near infrared spectroscopic imaging was used to non-invasively assess the changes that occur in the early (1-3 h) post-burn period. The study used an accurate porcine model to investigate the potential of near infrared spectroscopic imaging to accurately distinguish between burns of varying severity. Data analysis was carried out using a two-way and three-way data decompositions techniques to investigate the spectral changes related to burns. Burn injuries drastically alter the physical and optical properties of the tissue. Thermal destruction of cutaneous vasculature disrupts perfusion and oxygen delivery to the affected tissue. The results demonstrated that near infrared spectroscopic imaging might provide a new tool for an objective clinical assessment of burn injuries.

  15. Rapid and label-free classification of human glioma cells by infrared spectroscopic imaging.

    PubMed

    Steiner, Gerald; Küchler, Saskia; Hermann, Andreas; Koch, Edmund; Salzer, Reiner; Schackert, Gabriele; Kirsch, Matthias

    2008-12-01

    The discrimination of cell types is a crucial task in cell biology. Available techniques, based on an irreversible treatment of the cells, do not allow a sensitive label-free characterization under in situ conditions. Infrared spectroscopic imaging is a new and useful tool for studying individual cells. It has established itself as a powerful method to probe the molecular composition and to indicate the biochemistry of cells. Monolayers of cultivated U343, T1115 and T508 human glioma cells were characterized using infrared spectroscopic imaging. A classification algorithm based on linear discriminant analysis was developed to distinguish different cells without labeling. The classification is based upon spectral features which mainly arise from proteins, nucleic acids, and cholesterol. An accuracy of 91% and 84% was obtained for cells of U343 and T1115, respectively. Cells of the T508 cell line exhibit some misclassifications resulting in a lower accuracy rate of 73%. As the results demonstrate, the potential of infrared spectroscopic imaging method to assess the overall molecular composition of cells in a non-destructive manner opens the possibility to characterize cells on a molecular level without labels or an irreversible treatment.

  16. Mid-Infrared and Near-Infrared Spectroscopic Properties of Fusarium Isolates: Effects of Culture Conditions

    USDA-ARS?s Scientific Manuscript database

    The Fusarium genus includes soil saprobes as well as pathogenic or toxin-producing species. Traditional classification of Fusarium isolates is slow and requires a high level of expertise. The objective of this project is to describe culture condition effects on mid-infrared (MidIR) and near-infrared...

  17. Fourier transform infrared and Raman spectroscopic characterization of homogeneous solution concentration gradients near a container wall at different temperatures

    NASA Technical Reports Server (NTRS)

    Loo, B. H.; Burns, D. H.; Lee, Y. G. L.; Emerson, M. T.

    1991-01-01

    Fourier transform infrared (FTIR) and Raman spectroscopic techniques were used to study the solution concentration gradient in succino nitrile-rich and water-rich homogeneous solutions. The spectroscopic data shows significant concentration dependency. Although FTIR-attenuated total reflectance could not yield surface spectra since the evanescent infrared wave penetrated deep into the bulk solution, it showed that water-rich clusters were decreased at higher temperatures. This result is consistent with the calorimetric results reported earlier.

  18. Infrared and infrared emission spectroscopic study of typical Chinese kaolinite and halloysite.

    PubMed

    Cheng, Hongfei; Frost, Ray L; Yang, Jing; Liu, Qinfu; He, Junkai

    2010-12-01

    The structure and thermal stability between typical Chinese kaolinite and halloysite were analysed by X-ray diffraction (XRD), infrared spectroscopy, infrared emission spectroscopy (IES) and Raman spectroscopy. Infrared emission spectroscopy over the temperature range of 300-700°C has been used to characterise the thermal decomposition of both kaolinite and halloysite. Halloysite is characterised by two bands in the water bending region at 1629 and 1648 cm(-1), attributed to structural water and coordinated water in the interlayer. Well defined hydroxyl stretching bands at around 3695, 3679, 3652 and 3625 cm(-1) are observed for both kaolinite and halloysite. The 550°C infrared emission spectrum of halloysite is similar to that of kaolinite in 650-1350 cm(-1) spectral region. The infrared emission spectra of halloysite were found to be considerably different to that of kaolinite at lower temperatures. These differences are attributed to the fundamental difference in the structure of the two minerals.

  19. Infrared spectroscopic studies of myeloid leukemia (ML-1) cells at different phases of the cell cycle

    NASA Astrophysics Data System (ADS)

    Boydston-White, Susie; Diem, Max

    1999-06-01

    Advances in infrared spectroscopic methodology permit excellent infrared spectra to be collected from objects as small as single human cells. These advances have lead to an increased interest of the use of infrared spectroscopy as a medical diagnostic tool. Infrared spectra of myeloid leukemia (ML-1) cells are reported for cells derived from an asynchronous, exponentially-growing culture, as well as for cells that were fractionated according to their stage within the cell division cycle. The observed results suggest that the cells' DNA is detectable by infrared spectroscopy mainly when the cell is in the S phase, during the replication of DNA. In the G1 and G2 phases, the DNA is so tightly packed in the nucleus that it appears opaque to infrared radiation. Consequently, the nucleic acid spectral contributions in the G1 and G2 phases would be mostly that of cytoplasmic RNA. These results suggest that infrared spectral changes observed earlier between normal and abnormal cells may have been due to different distributions of cells within the stages of the cell division cycle.

  20. Fourier transform spectroscopic imaging using an infrared focal-plane array detector.

    PubMed

    Lewis, E N; Treado, P J; Reeder, R C; Story, G M; Dowrey, A E; Marcott, C; Levin, I W

    1995-10-01

    A powerful new mid-infrared spectroscopic chemical imaging technique combining step-scan Fourier transform Michelson interferometry with indium antimonide focal-plane array (FPA) image detection is described. The coupling of an infrared focal-plane array detector to an interferometer provides an instrumental multiplex/multichannel advantage. Specifically, the multiple detector elements enable spectra at all pixels to be collected simultaneously, while the interferometer portion of the system allows all the spectral frequencies to be measured concurrently. With this method of mid-infrared spectroscopic imaging, the fidelity of the generated spectral images is limited only by the number of pixels on the FPA detector, and only several seconds of starting time is required for spectral image acquisition. This novel, high-definition technique represents the future of infrared chemical imaging analysis, a new discipline within the chemical and material sciences, which combines the capability of spectroscopy for molecular analysis with the power of visualization. In particular, chemical imaging is broadly applicable for noninvasive, molecular characterization of heterogeneous materials, since all solid-state materials exhibit chemical nonuniformity that exists either by design or by development during the course of material preparation or fabrication. Imaging, employing Raman and infrared spectroscopy, allows the precise characterization of the chemical composition, domain structure, and chemical architecture of a variety of substances. This information is often crucial to a wide range of activities, extending from the fabrication of new materials to a basic understanding of biological samples. In this study, step-scan imaging principles, instrument design details, and infrared chemical imaging results are presented. Since the prospect of performing high-resolution and high-definition mid-infrared chemical imaging very rapidly has been achieved with the step-scan approach

  1. Mid - infrared solid state lasers for spectroscopic applications

    NASA Astrophysics Data System (ADS)

    Terekhov, Yuri

    This work is devoted to study of novel high power middle-infrared (Mid-IR) laser sources enabling development of portable platform for sensing of organic molecules with the use of recently discovered Quartz Enhanced Photo Acoustic Spectroscopy (QEPAS). The ability to detect small concentrations is beneficial to monitor atmosphere pollution as well for biomedical applications such as analysis of human breath to detect earlier stages of cancer or virus activities. A QEPAS technique using a quartz tuning fork (QTF) as a detector enables a strong enhancement of measured signal when pump laser is modulated with a frequency coinciding with a natural frequency of a QTF. It is known that the detectability of acousto-optics based sensors is proportional to the square root of the laser intensity used for detection of analyte. That is the reason why commercially available semiconductor Mid-IR lasers having small output power limit sensitivity of modern QEPAS based sensors. The lack of high power broadly tunable lasers operating with a modulation frequency of quartz forks (~ 32.768 kHz) is the major motivation of this study. Commercially available Mid-IR (2-3.3 microm), single frequency, continuous wave (CW) fiber pumped lasers based on transition metal doped chalcogenides (e.g. Cr:ZnSe) prove to be efficient laser sources for organic molecules detection. However, their direct modulation is limited to several kHz, and cannot be directly used in combination with QEPAS. Hence, one objective of this work is to study and develop fiber laser pumped Ho:YAG (Er:YAG)/Cr:ZnSe tandem laser system/s. Ho (Holmium) and/or Er (Erbium) ions having long radiation lifetime (~ 10 ms) can effectively accumulate population inversion under CW fiber laser excitation. Utilization of acousto-optic (AO) modulators in the cavity of Ho:YAG (Er:YAG) laser will enable effective Q-Switching with repetition rate easily reaching the resonance frequency of a QTF. It is expected that utilization of Ho:YAG (Er

  2. Fourier Transform Infrared Spectroscopic Studies of Small Pure Carbon Clusters

    NASA Astrophysics Data System (ADS)

    Kranze, Richard Harlow

    1996-01-01

    Fourier transform infrared studies of small pure carbon linear chains have been carried out by trapping the products of the vacuum ultraviolet photolysis of 2 -methyl-1,3,-butadiene and by the high temperature evaporation of graphite, in solid Ar at 10 K. Isotopic data obtained for each of the species studied enabled the unambiguous assignments. Comparison of these assignments with theoretical calculations yielded very good agreement. The results of the presented research have resulted in new information on two pure carbon linear chains, C _5 and C_9, and have cleared up considerable confusion surrounding previous assignments to the linear C_6 carbon cluster. In the course of the C_9 study, however, it was also determined that in certain circumstances extreme care must be taken when making assignments based on isotopic substitutions. The v_4(sigma_{u }) antisymmetric stretch at 1446.6 cm ^{-1} of the linear C_5 carbon cluster has been identified for the first time by the analysis of isotopic data. This assignment agrees well with the predicted frequencies of both Botschwina and Sebald (1989) and Ewing and Shavitt (1992). Several isotopic bands belonging to the v_3(sigma u) antisymmetric stretch were also reassigned as a result of the better resolution available in the present study. Both the v_4(sigma_ {u}) and v_5(sigma u) assignments for the linear C_6 carbon cluster were confirmed through the analysis of isotopic data. Prior to publication of this work, it had been suggested by Neumark et al. (1993) that the assignments particularly for v_5( sigmau) were incorrect on the basis of force constant adjustment calculations. However, publication of the present work with the isotopic evidence, which definitively proved that the proposed assignments were correct, Neumark et al. agreed and concluded their difficulty resulted from the large anharmonicity involved with the v_5(sigma_{u }) mode. A second antisymmetric stretch, v_7( sigmau), for the linear C_9 cluster has

  3. Feasibility Demonstration of Wide-Field Fourier-Spectroscopic-Imaging in Infrared Region

    NASA Astrophysics Data System (ADS)

    Qi, Wei; Takuma, Takashi; Tsutsumi, Ryosuke; Inui, Asuka; Kagiyama, Hiroyasu; Kojima, Daisuke; Nishiyama, Akira; Ishimaru, Ichirou

    We are aiming at the realization of living-environment sensor and non-invasive blood-sugar sensor by the proposed imaging type 2-D Fourier spectroscopy. This method is based on the phase-shift interference between the object beams. As a result, even if the object beams are spatially incoherent, we can observe the phase-shift interference phenomena. In the near infrared region, we can obtain the high-contrast blood vessel image of mouse's ear in the deeper part by InGaAs camera. Furthermore, in the mid-infrared region, we have successfully measured the radiation spectroscopic-imaging with wild field of view by the infrared module, such as the house plants.

  4. Comparison of dynamical model atmospheres of Mira variables with mid-infrared interferometric and spectroscopic observations

    NASA Astrophysics Data System (ADS)

    Ohnaka, K.; Scholz, M.; Wood, P. R.

    2006-02-01

    We present a comparison of dynamical model atmospheres with mid-infrared (~11 μm) interferometric and spectroscopic observations of the Mira variable o Cet. The dynamical model atmospheres of Mira variables pulsating in the fundamental mode can fairly explain, without assuming ad-hoc components, the seemingly contradictory mid-infrared spectroscopic and interferometric observations of o Cet: the 11 μm sizes measured in the bandpass without any salient spectral features are about twice as large as those measured in the near-infrared. Our calculations of synthetic spectra show that the strong absorption due to a number of optically thick H2O lines is filled in by the emission of these H2O lines originating in the geometrically extended layers, providing a possible physical explanation for the picture proposed by Ohnaka (2004a) based on a semi-empirical modeling. This filling-in effect results in rather featureless, continuum-like spectra in rough agreement with the observed high-resolution 11 μm spectra, although the models still predict the H2O lines to be more pronounced than the observations. The inverse P-Cyg profiles of some strong H2O lines observed in the 11 μm spectra can also be reasonably reproduced by our dynamical model atmospheres. The presence of the extended H2O layers manifests itself as mid-infrared angular diameters much larger than the continuum diameter. The 11 μm uniform-disk diameters predicted by our dynamical model atmospheres are in fair agreement with those observed with the Infrared Spatial Interferometer (ISI), but still somewhat smaller than the observed diameters. We discuss possible reasons for this discrepancy and problems with the current dynamical model atmospheres of Mira variables.

  5. [Tri-Level Infrared Spectroscopic Identification of Hot Melting Reflective Road Marking Paint].

    PubMed

    Li, Hao; Ma, Fang; Sun, Su-qin

    2015-12-01

    In order to detect the road marking paint from the trace evidence in traffic accident scene, and to differentiate their brands, we use Tri-level infrared spectroscopic identification, which employs the Fourier transform infrared spectroscopy (FTIR), the second derivative infrared spectroscopy(SD-IR), two-dimensional correlation infrared spectroscopy(2D-IR) to identify three different domestic brands of hot melting reflective road marking paints and their raw materials in formula we Selected. The experimental results show that three labels coatings in ATR and FTIR spectrograms are very similar in shape, only have different absorption peak wave numbers, they have wide and strong absorption peaks near 1435 cm⁻¹, and strong absorption peak near 879, 2955, 2919, 2870 cm⁻¹. After enlarging the partial areas of spectrograms and comparing them with each kind of raw material of formula spectrograms, we can distinguish them. In the region 700-970 and 1370-1 660 cm⁻¹ the spectrograms mainly reflect the different relative content of heavy calcium carbonate of three brands of the paints, and that of polyethylene wax (PE wax), ethylene vinyl acetate resin (EVA), dioctyl phthalate (DOP) in the region 2800-2960 cm⁻¹. The SD-IR not only verify the result of the FTIR analysis, but also further expand the microcosmic differences and reflect the different relative content of quartz sand in the 512-799 cm-1 region. Within the scope of the 1351 to 1525 cm⁻¹, 2D-IR have more significant differences in positions and numbers of automatically peaks. Therefore, the Tri-level infrared spectroscopic identification is a fast and effective method to distinguish the hot melting road marking paints with a gradually improvement in apparent resolution.

  6. MASSIVE YOUNG STELLAR OBJECTS IN THE GALACTIC CENTER. I. SPECTROSCOPIC IDENTIFICATION FROM SPITZER INFRARED SPECTROGRAPH OBSERVATIONS

    SciTech Connect

    An, Deokkeun; RamIrez, Solange V.; Boogert, A. C. Adwin; Sellgren, Kris; Arendt, Richard G.; Schultheis, Mathias; Cotera, Angela S.; Stolovy, Susan R.

    2011-08-01

    We present results from our spectroscopic study, using the Infrared Spectrograph (IRS) on board the Spitzer Space Telescope, designed to identify massive young stellar objects (YSOs) in the Galactic center (GC). Our sample of 107 YSO candidates was selected based on Infrared Array Camera (IRAC) colors from the high spatial resolution, high sensitivity Spitzer/IRAC images in the Central Molecular Zone, which spans the central {approx}300 pc region of the Milky Way. We obtained IRS spectra over 5-35 {mu}m using both high- and low-resolution IRS modules. We spectroscopically identify massive YSOs by the presence of a 15.4 {mu}m shoulder on the absorption profile of 15 {mu}m CO{sub 2} ice, suggestive of CO{sub 2} ice mixed with CH{sub 3}OH ice on grains. This 15.4 {mu}m shoulder is clearly observed in 16 sources and possibly observed in an additional 19 sources. We show that nine massive YSOs also reveal molecular gas-phase absorption from CO{sub 2}, C{sub 2}H{sub 2}, and/or HCN, which traces warm and dense gas in YSOs. Our results provide the first spectroscopic census of the massive YSO population in the GC. We fit YSO models to the observed spectral energy distributions and find YSO masses of 8-23 M{sub sun}, which generally agree with the masses derived from observed radio continuum emission. We find that about 50% of photometrically identified YSOs are confirmed with our spectroscopic study. This implies a preliminary star formation rate of {approx}0.07 M{sub sun} yr{sup -1} at the GC.

  7. Heterogeneously integrated silicon photonics for the mid-infrared and spectroscopic sensing.

    PubMed

    Chen, Yu; Lin, Hongtao; Hu, Juejun; Li, Mo

    2014-07-22

    Besides being the foundational material for microelectronics, crystalline silicon has long been used for the production of infrared lenses and mirrors. More recently, silicon has become the key material to achieve large-scale integration of photonic devices for on-chip optical interconnect and signal processing. For optics, silicon has significant advantages: it offers a very high refractive index and is highly transparent in the spectral range from 1.2 to 8 μm. To fully exploit silicon’s superior performance in a remarkably broad range and to enable new optoelectronic functionalities, here we describe a general method to integrate silicon photonic devices on arbitrary foreign substrates. In particular, we apply the technique to integrate silicon microring resonators on mid-infrared compatible substrates for operation in the mid-infrared. These high-performance mid-infrared optical resonators are utilized to demonstrate, for the first time, on-chip cavity-enhanced mid-infrared spectroscopic analysis of organic chemicals with a limit of detection of less than 0.1 ng.

  8. Development of biosensor based on imaging ellipsometry and its applications

    NASA Astrophysics Data System (ADS)

    Jin, Gang

    2011-03-01

    We have reviewed the development of the biosensor based on imaging ellipsometry including its principle, methodology and general engineering model structure, mainly compared experimental setups between the previous one and the recently developed one. It's obvious that the sensitivity and the signal to noise ratio has been improved by a various spectroscopic light source, the optimization of polarized components setting and a cool CCD, especially the contribution of the CCD, which makes the biosensor available in more and more biomedical applications.

  9. Thermal Physical, and Infrared Spectroscopic Studies on Glasses Prepared by Microwave Route

    SciTech Connect

    Jagadeesha, N.; Gowda, V. C. Veeranna; Chakradhar, R. P. S.; Reddy, C. Narayana

    2011-07-15

    This paper describes thermal, physical and spectroscopic properties of glasses prepared by a novel micro wave method. These studies exhibited a strong compositional dependent trend and existence of characteristic boro-vanadate groups in these glasses. The scheme of modification of borate and vanadate groups is controlled by Sanderson's electronegativity principle. Analysis of density and glass transition temperatures suggests the presence of characteristic four coordinated borate and diboro - vanadate groups in these glasses. The presence of [BO{sub 4/2}]{sup -} and [B{sub 2}V{sub 2}O{sub 9}]{sup 2-}) groups are confirmed by Infrared Spectroscopy of investigated glasses.

  10. Infrared spectroscopic imaging detects chemical modifications in liver fibrosis due to diabetes and disease

    PubMed Central

    Sreedhar, Hari; Varma, Vishal K.; Gambacorta, Francesca V.; Guzman, Grace; Walsh, Michael J.

    2016-01-01

    The importance of stroma as a rich diagnostic region in tissue biopsies is growing as there is an increasing understanding that disease processes in multiple organs can affect the composition of adjacent connective tissue regions. This may be especially true in the liver, since this organ’s central metabolic role exposes it to multiple disease processes. We use quantum cascade laser infrared spectroscopic imaging to study changes in the chemical status of hepatocytes and fibrotic regions of liver tissue that result from the progression of liver cirrhosis to hepatocellular carcinoma and the potentially confounding effects of diabetes mellitus. PMID:27375956

  11. Breast histopathology using random decision forests-based classification of infrared spectroscopic imaging data

    NASA Astrophysics Data System (ADS)

    Mayerich, David M.; Walsh, Michael; Kadjacsy-Balla, Andre; Mittal, Shachi; Bhargava, Rohit

    2014-03-01

    Current methods for cancer detection rely on clinical stains, often using immunohistochemistry techniques. Pathologists then evaluate the stained tissue in order to determine cancer stage treatment options. These methods are commonly used, however they are non-quantitative and it is difficult to control for staining quality. In this paper, we propose the use of mid-infrared spectroscopic imaging to classify tissue types in tumor biopsy samples. Our goal is to augment the data available to pathologists by providing them with quantitative chemical information to aid diagnostic activities in clinical and research activities related to breast cancer.

  12. Infrared Spectroscopic Study of C12/02 Co-Adsorption on Al(111)

    DTIC Science & Technology

    1988-08-01

    adsorbed 0 and Cl leading to an enhancement of 6 the Al -O dynamic dipole moment. The situation is more complicated in other exposure regimes [e.g., Figs...Include Security Classification) Unclassified Technical Report No. 6 . "Infrared Spectroscopic Study of C12/02 Co-Adsorption on Al (111). 12 PERSONAL...IRRARS) has been used to observe the effects of C12 (02 ) pre-adsorption on the vibrational modes of 0 (Cl) formed by exposure of Al (111) to 0 ’ (C12

  13. Infrared 3-4 um Spectroscopic Investigation of a Large Sample of Nearby Ultraluminous Infrared Galaxies

    DTIC Science & Technology

    2005-09-27

    servable with small air masses from Mauna Kea , Hawaii, our main observing site. These selection criteria result in 24 ULIRGs classified optically as... Observatory , 2-21-1, Osawa, Mitaka, Tokyo 181-8588, Japan; masa.imanishi@nao.ac.jp C. C. Dudley Naval Research Laboratory, Remote Sensing Division...data collected at Subaru Telescope, which is operated by the National Astronomical Observatory of Japan. 2 Visiting Astronomer at the Infrared Telescope

  14. Raman, infrared and near-infrared spectroscopic characterization of the herderite-hydroxylherderite mineral series

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; Scholz, Ricardo; López, Andrés; Xi, Yunfei; Queiroz, Camila de Siqueira; Belotti, Fernanda M.; Filho, Mauro Cândido

    2014-01-01

    Natural single-crystal specimens of the herderite-hydroxylherderite series from Brazil, with general formula CaBePO4(F,OH), were investigated by electron microprobe, Raman, infrared and near-infrared spectroscopies. The minerals occur as secondary products in granitic pegmatites. Herderite and hydroxylherderite minerals show extensive solid solution formation. The Raman spectra of hydroxylherderite are characterized by bands at around 985 and 998 cm-1, assigned to ν1 symmetric stretching mode of the HOPO33- and PO43- units. Raman bands at around 1085, 1128 and 1138 cm-1 are attributed to both the HOP and PO antisymmetric stretching vibrations. The set of Raman bands observed at 563, 568, 577, 598, 616 and 633 cm-1 are assigned to the ν4 out of plane bending modes of the PO4 and H2PO4 units. The OH Raman stretching vibrations of hydroxylherderite were observed ranging from 3626 cm-1 to 3609 cm-1. The infrared stretching vibrations of hydroxylherderites were observed between 3606 cm-1 and 3599 cm-1. By using a Libowitzky type function, hydrogen bond distances based upon the OH stretching bands were calculated. Characteristic NIR bands at around 6961 and 7054 cm-1 were assigned to the first overtone of the fundamental, whilst NIR bands at 10,194 and 10,329 cm-1 are assigned to the second overtone of the fundamental OH stretching vibration. Insight into the structure of the herderite-hydroxylherderite series is assessed by vibrational spectroscopy.

  15. Spectral histology of breast tissue using mid-infrared spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Pounder, F. Nell; Bhargava, Rohit

    2009-02-01

    Histopathologic recognition is the gold standard in breast cancer diagnoses and is a primary determinant tool for cancer research. Unfortunately, the manual nature of histopathologic recognition leads to low throughput analysis, delays in decision-making and errors. Here, we present an automated means to accurate histologic recognition using mid-infrared molecular spectroscopy. Fourier transform infrared (FT-IR) spectroscopic imaging is combined with statistical pattern recognition and high throughput sampling to provide automated tissue segmentation into constituent cell types. The method does not need dyes or probes and dispenses with human input. Results demonstrate that the technique is capable of accurate histologic segmentation that can potentially become competitive with that attained by conventional immunohistochemical analyses.

  16. Raman, infrared and near-infrared spectroscopic characterization of the herderite-hydroxylherderite mineral series.

    PubMed

    Frost, Ray L; Scholz, Ricardo; López, Andrés; Xi, Yunfei; Queiroz, Camila de Siqueira; Belotti, Fernanda M; Cândido Filho, Mauro

    2014-01-24

    Natural single-crystal specimens of the herderite-hydroxylherderite series from Brazil, with general formula CaBePO4(F,OH), were investigated by electron microprobe, Raman, infrared and near-infrared spectroscopies. The minerals occur as secondary products in granitic pegmatites. Herderite and hydroxylherderite minerals show extensive solid solution formation. The Raman spectra of hydroxylherderite are characterized by bands at around 985 and 998 cm(-1), assigned to ν1 symmetric stretching mode of the HOPO3(3-) and PO4(3-) units. Raman bands at around 1085, 1128 and 1138 cm(-1) are attributed to both the HOP and PO antisymmetric stretching vibrations. The set of Raman bands observed at 563, 568, 577, 598, 616 and 633 cm(-1) are assigned to the ν4 out of plane bending modes of the PO4 and H2PO4 units. The OH Raman stretching vibrations of hydroxylherderite were observed ranging from 3626 cm(-1) to 3609 cm(-1). The infrared stretching vibrations of hydroxylherderites were observed between 3606 cm(-1) and 3599 cm(-1). By using a Libowitzky type function, hydrogen bond distances based upon the OH stretching bands were calculated. Characteristic NIR bands at around 6961 and 7054 cm(-1) were assigned to the first overtone of the fundamental, whilst NIR bands at 10,194 and 10,329 cm(-1) are assigned to the second overtone of the fundamental OH stretching vibration. Insight into the structure of the herderite-hydroxylherderite series is assessed by vibrational spectroscopy. Copyright © 2013 Elsevier B.V. All rights reserved.

  17. Infrared Spectroscopic Characteristics and Ionic Occupations in Crystalline Tunneling System of Yellow Beryl

    NASA Astrophysics Data System (ADS)

    Yu, Xiaoyan; Hu, Dingyu; Niu, Xiaowei; Kang, Weirui

    2017-02-01

    Infrared spectroscopic characteristics and ionic occupations in a crystalline tunneling system of yellow beryl crystals from Inner Mongolia, China, were investigated by standard gemological methods, laser ablation inductively coupled plasma mass spectrometry, x-ray diffraction, ultraviolet-visible (UV-Vis) spectrophotometry, and infrared (IR) spectroscopy in this study. The refractive index, specific gravity, and chemical composition of the samples are shown within the range of natural yellow beryls previously reported. The unit cell dimensions of the beryls are 9.208-9.212 Å for a and 9.105-9.206 Å for c with a ratio of c/a = 0.9985-0.9994. The beryl samples are generally alkali-poor beryls with Fe <0.05 and alkali <0.03 atoms per formula unit in the channel sites. The standard gemological test and mid-IR confirmed that these samples are natural beryl. However, polarized UV-Vis spectra showed an absorption band at 689 nm, and all polarized IR spectra of samples displayed a 7217-cm-1 infrared absorption in the studied samples which was associated with irradiation of the coloration. This treatment of color irradiation can be detected from the beryl channels with 689-nm absorption and 7217-cm-1 infrared absorption.

  18. Revision of Stellar Intrinsic Colors in the Infrared by Spectroscopic Surveys

    NASA Astrophysics Data System (ADS)

    Jian, Mingjie; Gao, Shuang; Zhao, He; Jiang, Biwei

    2017-01-01

    Intrinsic colors of normal stars are derived in the popularly used infrared bands involving the Two Micron All-Sky Survey/JHKS, Wide-field Infrared Survey Explorer, Spitzer/IRAC, and AKARI/S9W filters. Based on three spectroscopic surveys—LAMOST, RAVE, and APOGEE, stars are classified into groups of giants and dwarfs, as well as metal-normal and metal-poor stars. An empirical analytical relation of the intrinsic color is obtained with stellar effective temperature {T}{eff} for each group of stars after the zero-reddening stars are selected from the blue edge in the J-λ versus {T}{eff} diagram. It is found that metallicity has little effect on the infrared colors. In the near-infrared bands, our results agree with previous work. In addition, the color indexes H-W2 and {K}S-W1, which are taken as constant to calculate interstellar extinction, are discussed. The intrinsic colors of M-type stars are derived separately due to the lack of accurate measurement of their effective temperature.

  19. Infrared Spectroscopic Characteristics and Ionic Occupations in Crystalline Tunneling System of Yellow Beryl

    NASA Astrophysics Data System (ADS)

    Yu, Xiaoyan; Hu, Dingyu; Niu, Xiaowei; Kang, Weirui

    2017-04-01

    Infrared spectroscopic characteristics and ionic occupations in a crystalline tunneling system of yellow beryl crystals from Inner Mongolia, China, were investigated by standard gemological methods, laser ablation inductively coupled plasma mass spectrometry, x-ray diffraction, ultraviolet-visible (UV-Vis) spectrophotometry, and infrared (IR) spectroscopy in this study. The refractive index, specific gravity, and chemical composition of the samples are shown within the range of natural yellow beryls previously reported. The unit cell dimensions of the beryls are 9.208-9.212 Å for a and 9.105-9.206 Å for c with a ratio of c/a = 0.9985-0.9994. The beryl samples are generally alkali-poor beryls with Fe <0.05 and alkali <0.03 atoms per formula unit in the channel sites. The standard gemological test and mid-IR confirmed that these samples are natural beryl. However, polarized UV-Vis spectra showed an absorption band at 689 nm, and all polarized IR spectra of samples displayed a 7217-cm-1 infrared absorption in the studied samples which was associated with irradiation of the coloration. This treatment of color irradiation can be detected from the beryl channels with 689-nm absorption and 7217-cm-1 infrared absorption.

  20. The Far Infrared Spectroscopic Explorer (FIRSPEX): probing the lifecycle of the ISM in the universe

    NASA Astrophysics Data System (ADS)

    Rigopoulou, D.; Caldwell, M.; Ellison, B.; Pearson, C.; Caux, E.; Cooray, A.; Gallego, J. D.; Gerin, M.; Goicoechea, J. R.; Goldsmith, P.; Kramer, C.; Lis, D. C.; Molinari, S.; Ossenkopf-Okada, V.; Savini, G.; Tan, B. K.; Tielens, X.; Viti, S.; Wiedner, M.; Yassin, G.

    2016-07-01

    The Far Infrared Spectroscopic Explorer (FIRSPEX) is a novel European-led astronomy mission concept developed to enable large area ultra high spectroscopic resolution surveys in the THz regime. FIRSPEX opens up a relatively unexplored spectral and spatial parameter space that will produce an enormously significant scientific legacy by focusing on the properties of the multi-phase ISM, the assembly of molecular clouds in our Galaxy and the onset of star formation; topics which are fundamental to our understanding of galaxy evolution. The mission uses a heterodyne instrument and a ~1.2 m primary antenna to scan large areas of the sky in a number of discreet spectroscopic channels from L2. The FIRSPEX bands centered at [CI] 809 GHz, [NII]1460 GHz, [CII]1900 GHz and [OI]4700 GHz have been carefully selected to target key atomic and ionic fine structure transitions difficult or impossible to access from the ground but fundamental to the study of the multi-phase ISM in the Universe. The need for state-of-the-art sensitivity dictates the use of superconducting mixers configured either as tunnel junctions or hot electron bolometers. This technology requires cooling to low temperatures, approaching 4K, in order to operate. The receivers will operate in double sideband configuration providing a total of 7 pixels on the sky. FIRSPEX will operate from L2 in both survey and pointed mode enabling velocity resolved spectroscopy of large areas of sky as well as targeted observations.

  1. Characterization of porcine skin as a model for human skin studies using infrared spectroscopic imaging.

    PubMed

    Kong, Rong; Bhargava, Rohit

    2011-06-07

    Porcine skin is often considered a substitute for human skin based on morphological and functional data, for example, for transdermal drug diffusion studies. A chemical, structural and temporal characterization of porcine skin in comparison to human skin is not available but will likely improve our understanding of this porcine skin model. Here, we employ Fourier transform infrared (FT-IR) spectroscopic imaging to holistically measure chemical species as well as spatial structure as a function of time to characterize porcine skin as a model for human skin. Porcine skin was found to resemble human skin spectroscopically and differences are elucidated. Cryo-prepared fresh porcine skin samples for spectroscopic imaging were found to be stable over time and small variations are observed. Hence, we extended characterization to the use of this model for dynamic processes. In particular, the capacity and stability of this model in transdermal diffusion is examined. The results indicate that porcine skin is likely to be an attractive tool for studying diffusion dynamics of materials in human skin.

  2. Fourier transform Infrared spectroscopic characterization of mineralizing type I collagen enzymatic trivalent cross-links.

    PubMed

    Paschalis, E P; Gamsjaeger, S; Tatakis, D N; Hassler, N; Robins, S P; Klaushofer, K

    2015-01-01

    The most abundant protein of bone's organic matrix is collagen. One of its most important properties is its cross-linking pattern, which is responsible for the fibrillar matrices' mechanical properties such as tensile strength and viscoelasticity. We have previously described a spectroscopic method based on the resolution of the Amide I and II Fourier transform Infrared (FTIR) bands to their underlying constituent peaks, which allows the determination of divalent and pyridinoline (PYD) collagen cross-links in mineralized thin bone tissue sections with a spatial resolution of ~6.3 μm. In the present study, we used FTIR analysis of a series of biochemically characterized collagen peptides, as well as skin, dentin, and predentin, to examine the potential reasons underlying discrepancies between two different analytical methodologies specifically related to spectral processing. The results identified a novel distinct FTIR underlying peak at ~1,680 cm(-1), correlated with deoxypyridinoline (DPD) content. Furthermore, the two different methods of spectral resolution result in widely different results, while only the method employing well-established spectroscopic routines for spectral resolution provided biologically relevant results, confirming our earlier studies relating the area of the underlying 1,660 cm(-1) with PYD content. The results of the present study describe a new peak that may be used to determine DPD content, confirm our earlier report relating spectroscopic parameters to PYD content, and highlight the importance of the selected spectral resolution methodology.

  3. Inverse problem solution in ellipsometry

    NASA Astrophysics Data System (ADS)

    Zabashta, Lubov A.; Zabashta, Oleg I.

    1995-11-01

    Interactive graphic system 'ELLA' is described which is an integrated program packet for reverse problem solution in ellipsometry. The solutions stable to experimental errors are found by two algorithms: a simplex method under constraints and a regularizing iteration method. A developed graphic procedure kit includes display of graphic surface layers, their optical parameters, and all main results of intermediate calculations. Specialized graphic input functions allow us to change the parameters of a chosen solution method, the basic data, to enter new additional information, etc. On the examples of model structure of GaAs-oxide MAI capabilities in ellipsometry for determination of multilayer structure optical parameters are studied.

  4. Skin hydration by spectroscopic imaging using multiple near-infrared bands

    NASA Astrophysics Data System (ADS)

    Attas, E. Michael; Sowa, Michael G.; Posthumus, Trevor B.; Schattka, Bernhard J.; Mantsch, Henry H.; Zhang, Shuliang L.

    2002-03-01

    Near-infrared spectroscopic methods have been developed to determine the degree of hydration of human skin in vivo. Reflectance spectroscopic imaging was used to investigate the distribution of skin moisture as a function of location. A human study in a clinical setting has generated quantitative data showing the effects of a drying agent and a moisturizer on delineated regions of the forearms of eight volunteers. Two digital imaging systems equipped with liquid-crystal tunable filters were used to collect stacks of monochromatic images at 10-nm intervals over the wavelength bands 650-1050 nm and 960-1700 nm. Images generated from measurements of water absorption-band areas at three different near-IR wavelengths (970, 1200, and 1450 nm) showed obvious differences in the apparent distribution of water in skin. Changes resulting from the skin treatments were much more evident in the 1200-nm and 1450-nm images than in the 970-nm ones. The variable sensitivity of the method at different wavelengths has been interpreted as being the result of different penetration depths of the infrared light used in the reflectance studies. Ex-vivo experiments with pigskin have provided evidence supporting the relationship between wavelength and penetration depth. Combining the hydration results from several near-IR water bands allows additional information on hydration depth to be obtained.

  5. Studies on Nephrite and Jadeite Jades by Fourier Transform Infrared (ftir) and Raman Spectroscopic Techniques

    NASA Astrophysics Data System (ADS)

    Tan, T. L.; Ng, L. L.; Lim, L. C.

    2013-10-01

    The mineralogical properties of black nephrite jade from Western Australia are studied by Fourier transform infrared (FTIR) spectroscopy using both transmission and specular reflectance techniques in the 4000-400 cm-1 wavenumber region. The infrared absorption peaks in the 3700-3600 cm-1 region which are due to the O-H stretching mode provides a quantitative analysis of the Fe/(Fe+Mg) ratio in the mineral composition of jade samples. The Fe/(Fe+Mg) percentage in black nephrite is found to be higher than that in green nephrite, but comparable to that of actinolite (iron-rich nephrite). This implies that the mineralogy of black nephrite is closer to actinolite than tremolite. The jade is also characterized using Raman spectroscopy in the 1200-200 cm-1 region. Results from FTIR and Raman spectroscopic data of black nephrite jade are compared with those of green nephrite jade from New Zealand and jadeite jade from Myanmar. Black nephrite appears to have a slightly different chemical composition from green nephrite. Spectra from FTIR and Raman spectroscopic techniques were found to be useful in differentiating black nephrite, green nephrite, and green jadeite jades. Furthermore, data on refractive index, specific gravity, and hardness of black nephrite jade are measured and compared with those of green nephrite and of jadeite jade.

  6. FRIENDS OF HOT JUPITERS. III. AN INFRARED SPECTROSCOPIC SEARCH FOR LOW-MASS STELLAR COMPANIONS

    SciTech Connect

    Piskorz, Danielle; Knutson, Heather A.; Ngo, Henry; Batygin, Konstantin; Muirhead, Philip S.; Crepp, Justin R.; Hinkley, Sasha; Morton, Timothy D.

    2015-12-01

    Surveys of nearby field stars indicate that stellar binaries are common, yet little is known about the effects that these companions may have on planet formation and evolution. The Friends of Hot Jupiters project uses three complementary techniques to search for stellar companions to known planet-hosting stars: radial velocity monitoring, adaptive optics imaging, and near-infrared spectroscopy. In this paper, we examine high-resolution K band infrared spectra of fifty stars hosting gas giant planets on short-period orbits. We use spectral fitting to search for blended lines due to the presence of cool stellar companions in the spectra of our target stars, where we are sensitive to companions with temperatures between 3500 and 5000 K and projected separations less than 100 AU in most systems. We identify eight systems with candidate low-mass companions, including one companion that was independently detected in our AO imaging survey. For systems with radial velocity accelerations, a spectroscopic non-detection rules out scenarios involving a stellar companion in a high inclination orbit. We use these data to place an upper limit on the stellar binary fraction at small projected separations, and show that the observed population of candidate companions is consistent with that of field stars and also with the population of wide-separation companions detected in our previous AO survey. We find no evidence that spectroscopic stellar companions are preferentially located in systems with short-period gas giant planets on eccentric and/or misaligned orbits.

  7. GriF: an infrared 3D spectroscopic mode for KIR/PUEO

    NASA Astrophysics Data System (ADS)

    Clenet, Yann; Arsenault, Robin; Beuzit, Jean-Luc; Chalabaev, Almas; Delage, Claude; Joncas, Gilles; Lacombe, Francois; Lai, Olivier; Le Coarer, Etienne; Le Mignant, David; Pau, Sylvain; Rabou, Patrick; Rouan, Daniel

    2000-07-01

    When combined with Adaptive Optics, integral field spectroscopy, i.e. observation of a sky field simultaneously in a number of spectral passbands, is the most efficient way to perform spectro-imaging at high angular resolution. GriF will provide the CFHT community with such a capability in the near infrared K-band. This extension will be completed by means of two simple optical devices to be installed in the KIR cryostat (the infrared camera of PUEO): a cooled grism in the filter-wheel and a cold aperture on an entrance focal plane wheel. They will be completed by a room-temperature Fabry- Perot (FP) interferometer in front of KIR. The FP selects narrow bandpass images while the grism spatially separates them, giving a 3-D spectroscopic capacity within a compact and light design. At each exposure, several (up to 9) monochromatic images of a rectangular field of about 36 arcseconds X 4 arc-seconds will be simultaneously acquired, allowing a precise subtraction of continuum and background. The cooled grism will guarantee a low background environment, thus a good sensitivity at K. The medium spectral resolution (about 2600) will fit to a number of programs and will represent a considerable improvement on imaging with narrow- band filters. Thus, combining high angular resolution with the spectroscopic diagnosis, GriF will allow the study of a large class of compact objects or structures, especially in the extragalactic domain where its sensitivity should be unique.

  8. Spectroscopic Infrared Extinction Mapping as a Probe of Grain Growth in IRDCs

    NASA Astrophysics Data System (ADS)

    Lim, Wanggi; Carey, Sean J.; Tan, Jonathan C.

    2015-11-01

    We present spectroscopic tests of MIR to FIR extinction laws in IRDC G028.36+00.07, a potential site of massive star and star cluster formation. Lim & Tan developed methods of FIR extinction mapping of this source using Spitzer-MIPS 24 μm and Herschel-PACS 70 μm images, and by comparing to MIR Spitzer-IRAC 3-8 μm extinction maps, found tentative evidence for grain growth in the highest mass surface density regions. Here we present results of spectroscopic infrared extinction mapping using Spitzer-IRS (14-38 μm) data of the same Infrared dark cloud (IRDC). These methods allow us to first measure the SED of the diffuse Galactic interstellar medium that is in the foreground of the IRDC. We then carry out our primary investigation of measuring the MIR to FIR opacity law and searching for potential variations as a function of mass surface density within the IRDC. We find relatively flat, featureless MIR-FIR opacity laws that lack the ˜12 and ˜35 μm features associated with the thick water ice mantle models of Ossenkopf & Henning. Their thin ice mantle models and the coagulating aggregate dust models of Ormel et al. are a generally better match to the observed opacity laws. We also find evidence for generally flatter MIR to FIR extinction laws as mass surface density increases, strengthening the evidence for grain and ice mantle growth in higher density regions.

  9. SPECTROSCOPIC INFRARED EXTINCTION MAPPING AS A PROBE OF GRAIN GROWTH IN IRDCs

    SciTech Connect

    Lim, Wanggi; Carey, Sean J.; Tan, Jonathan C.

    2015-11-20

    We present spectroscopic tests of MIR to FIR extinction laws in IRDC G028.36+00.07, a potential site of massive star and star cluster formation. Lim and Tan developed methods of FIR extinction mapping of this source using Spitzer-MIPS 24 μm and Herschel-PACS 70 μm images, and by comparing to MIR Spitzer-IRAC 3–8 μm extinction maps, found tentative evidence for grain growth in the highest mass surface density regions. Here we present results of spectroscopic infrared extinction mapping using Spitzer-IRS (14–38 μm) data of the same Infrared dark cloud (IRDC). These methods allow us to first measure the SED of the diffuse Galactic interstellar medium that is in the foreground of the IRDC. We then carry out our primary investigation of measuring the MIR to FIR opacity law and searching for potential variations as a function of mass surface density within the IRDC. We find relatively flat, featureless MIR–FIR opacity laws that lack the ∼12 and ∼35 μm features associated with the thick water ice mantle models of Ossenkopf and Henning. Their thin ice mantle models and the coagulating aggregate dust models of Ormel et al. are a generally better match to the observed opacity laws. We also find evidence for generally flatter MIR to FIR extinction laws as mass surface density increases, strengthening the evidence for grain and ice mantle growth in higher density regions.

  10. Coupled blind signal separation and spectroscopic database fitting of the mid infrared PAH features

    NASA Astrophysics Data System (ADS)

    Rosenberg, M. J. F.; Berné, O.; Boersma, C.; Allamandola, L. J.; Tielens, A. G. G. M.

    2011-08-01

    Context. The aromatic infrared bands (AIBs) observed in the mid infrared spectrum of galactic and extragalactic sources are attributed to polycyclic aromatic hydrocarbons (PAHs). Recently, two new approaches have been developed to analyze the variations of AIBs in terms of chemical evolution of PAH species: blind signal separation (BSS) and the NASA Ames PAH IR Spectroscopic Database fitting tool. Aims: We aim to study AIBs in a photo-dissociation region (PDR) since in these regions, as the radiation environment changes, the evolution of AIBs are observed. Methods: We observe the NGC 7023-north west (NW) PDR in the mid-infrared (10-19.5 μm) using the InfraRed Spectrometer (IRS), on board Spitzer, in the high-resolution, short wavelength mode. Clear variations are observed in the spectra, most notably the ratio of the 11.0 to 11.2 μm bands, the peak position of the 11.2 and 12.0 μm bands, and the degree of asymmetry of the 11.2 μm band. The observed variations appear to change as a function of position within the PDR. We aim to explain these variations by a change in the abundances of the emitting components of the PDR. A blind signal separation (BSS) method, i.e. a Non-Negative Matrix Factorization algorithm is applied to separate the observed spectrum into components. Using the NASA Ames PAH IR Spectroscopic Database, these extracted signals are fit. The observed signals alone were also fit using the database and these components are compared to the BSS components. Results: Three component signals were extracted from the observation using BSS. We attribute the three signals to ionized PAHs, neutral PAHs, and very small grains (VSGs). The fit of the BSS extracted spectra with the PAH database further confirms the attribution to PAH+ and PAH0 and provides confidence in both methods for producing reliable results. Conclusions: The 11.0 μm feature is attributed to PAH+ while the 11.2 μm band is attributed to PAH0. The VSG signal shows a characteristically

  11. Novel Infrared Coherent Sources and Techniques for Spectroscopic Test of Fundamental Physics Principles

    NASA Astrophysics Data System (ADS)

    Pastor, P. Cancio; Galli, I.; Giusfredi, G.; Mazzotti, D.; De Natale, P.

    2013-06-01

    Recent achievements in high sensitivity and precision molecular spectroscopy in the mid-IR open new perspectives for experiments looking for possible violations of the basic postulates in quantum mechanics or quantum electro-dynamics in simple molecular systems. A new generation of hybrid infrared sources, including a direct link to optical frequency comb synthesizers (OFCSs) is under development. They provide metrological frequency precision and sensitivities that have achieved record levels of tens of parts-per-quadrillion when appropriate spectroscopic techniques are implemented. Such very recent developments will be reviewed. An example of possible application to the test of fundamental principles is attacking the symmetrization postulate (SP). Actually, the requirement of symmetry of the wave function under exchange of identical particles has a striking demonstration in the spectra of molecules including identical nuclei. The basic idea of the spectroscopic tests is to search with extremely high sensitivity for (weak) molecular lines involving the forbidden states. Since the early test of SP violation in bosonic particles, ^{12}C^{16}O_2 molecule has been considered a playground system. An upper limit of 10^{-11} to such violation was measured more than one decade ago by our group. The recent developed spectroscopic technique^{d,e} measured a minimum detected CO_2 gas pressures, in a 1-Hz bandwidth, of a few tens of femtobar, which could improve the previous test by more than two orders of magnitude. Progress in high sensitivity spectroscopic measurements in view of new violation tests will be reviewed, to investigate molecules with two and also three identical nuclei, like SO_3 and NH_3. I. Galli et al., Opt. Lett. 35, 3616 (2010). I. Ricciardi et al., Opt. Express 20, 9178 (2012). S. Borri, et al., Opt. Lett. 37, 1011 (2012). G. Giusfredi et al., Phys. Rev. Lett. 104, 110801(2010). I. Galli et al., Phys. Rev. Lett. 107, 270802 (2011). D. Mazzotti et al

  12. A far-infrared spectroscopic survey of intermediate redshift (ultra) luminous infrared galaxies

    SciTech Connect

    Magdis, Georgios E.; Rigopoulou, D.; Hopwood, R.; Clements, D.; Huang, J.-S.; Farrah, D.; Pearson, C.; Alonso-Herrero, Almudena; Bock, J. J.; Cooray, A.; Griffin, M. J.; Oliver, S.; Perez Fournon, I.; Riechers, D.; Swinyard, B. M.; Thatte, N.; Scott, D.; Valtchanov, I.; Vaccari, M.

    2014-11-20

    We present Herschel far-IR photometry and spectroscopy as well as ground-based CO observations of an intermediate redshift (0.21 ≤ z ≤ 0.88) sample of Herschel-selected (ultra)-luminous infrared galaxies (L {sub IR} > 10{sup 11.5} L {sub ☉}). With these measurements, we trace the dust continuum, far-IR atomic line emission, in particular [C II] 157.7 μm, as well as the molecular gas of z ∼ 0.3 luminous and ultraluminous infrared galaxies (LIRGs and ULIRGs) and perform a detailed investigation of the interstellar medium of the population. We find that the majority of Herschel-selected intermediate redshift (U)LIRGs have L {sub C} {sub II}/L {sub FIR} ratios that are a factor of about 10 higher than that of local ULIRGs and comparable to that of local normal and high-z star-forming galaxies. Using our sample to bridge local and high-z [C II] observations, we find that the majority of galaxies at all redshifts and all luminosities follow an L {sub C} {sub II}–L {sub FIR} relation with a slope of unity, from which local ULIRGs and high- z active-galactic-nucleus-dominated sources are clear outliers. We also confirm that the strong anti-correlation between the L {sub C} {sub II}/L {sub FIR} ratio and the far-IR color L {sub 60}/L {sub 100} observed in the local universe holds over a broad range of redshifts and luminosities, in the sense that warmer sources exhibit lower L {sub C} {sub II}/L {sub FIR} at any epoch. Intermediate redshift ULIRGs are also characterized by large molecular gas reservoirs and by lower star formation efficiencies compared to that of local ULIRGs. The high L {sub C} {sub II}/L {sub FIR} ratios, the moderate star formation efficiencies (L {sub IR}/L{sub CO}{sup ′} or L {sub IR}/M{sub H{sub 2}}), and the relatively low dust temperatures of our sample (which are also common characteristics of high-z star-forming galaxies with ULIRG-like luminosities) indicate that the evolution of the physical properties of (U)LIRGs between the

  13. A Far-infrared Spectroscopic Survey of Intermediate Redshift (Ultra) Luminous Infrared Galaxies

    NASA Astrophysics Data System (ADS)

    Magdis, Georgios E.; Rigopoulou, D.; Hopwood, R.; Huang, J.-S.; Farrah, D.; Pearson, C.; Alonso-Herrero, Almudena; Bock, J. J.; Clements, D.; Cooray, A.; Griffin, M. J.; Oliver, S.; Perez Fournon, I.; Riechers, D.; Swinyard, B. M.; Scott, D.; Thatte, N.; Valtchanov, I.; Vaccari, M.

    2014-11-01

    We present Herschel far-IR photometry and spectroscopy as well as ground-based CO observations of an intermediate redshift (0.21 <= z <= 0.88) sample of Herschel-selected (ultra)-luminous infrared galaxies (L IR > 1011.5 L ⊙). With these measurements, we trace the dust continuum, far-IR atomic line emission, in particular [C II] 157.7 μm, as well as the molecular gas of z ~ 0.3 luminous and ultraluminous infrared galaxies (LIRGs and ULIRGs) and perform a detailed investigation of the interstellar medium of the population. We find that the majority of Herschel-selected intermediate redshift (U)LIRGs have L C II /L FIR ratios that are a factor of about 10 higher than that of local ULIRGs and comparable to that of local normal and high-z star-forming galaxies. Using our sample to bridge local and high-z [C II] observations, we find that the majority of galaxies at all redshifts and all luminosities follow an L C II -L FIR relation with a slope of unity, from which local ULIRGs and high- z active-galactic-nucleus-dominated sources are clear outliers. We also confirm that the strong anti-correlation between the L C II /L FIR ratio and the far-IR color L 60/L 100 observed in the local universe holds over a broad range of redshifts and luminosities, in the sense that warmer sources exhibit lower L C II /L FIR at any epoch. Intermediate redshift ULIRGs are also characterized by large molecular gas reservoirs and by lower star formation efficiencies compared to that of local ULIRGs. The high L C II /L FIR ratios, the moderate star formation efficiencies (L IR/L\\prime _CO or L IR/M_H2), and the relatively low dust temperatures of our sample (which are also common characteristics of high-z star-forming galaxies with ULIRG-like luminosities) indicate that the evolution of the physical properties of (U)LIRGs between the present day and z > 1 is already significant by z ~ 0.3.

  14. Fourier Transform Infrared Spectroscopic Studies Of Wheat In The Mid Infrared

    NASA Astrophysics Data System (ADS)

    Olinger, Jill M.; Griffiths, Peter R.

    1989-12-01

    Official grain standards of the United States state that wheat may be divided into seven classes which are: Durum, Red Durum, Hard Red Spring, Hard Red Winter, Soft Red Winter, White, and Mixed.1 Most end uses of wheat involve converting the grain into flour through one of a variety of grinding methods. The quality of wheat-based products is often very dependent upon the type or class of wheat which was used to make the flour. Pasta products, for example, are made almost exclusively from the flour of durum wheats, which are the hardest of the wheats listed above. The highest quality breads are produced using flour from wheats classed as hard, whereas cakes, cookies and pastries are considered best when flour from wheats classed as soft are used. It is obvious then that the capability of determining the class of a particular wheat, especially with respect to hardness, is of economic importance to growers, processors, and merchants of wheat and wheat products. Hardness has been measured in many different ways 2-5 but, as of yet, no one method has become the method of choice. This paper reports on the use of principal components analysis (PCA) of mid infrared diffuse reflectance (DR) spectra of diluted ground wheats to aid in the classification of those wheats with respect to their hardness. The theory and mathematics involved in a principal component analysis have been described elsewhere.9

  15. Infrared spectroscopic analysis of skin tumor of mice treated with several medicinal plants

    PubMed Central

    Ali, Huma; Dixit, Savita

    2013-01-01

    Objective To evaluate the differences between cancerous tissue, drug treated tissue and its corresponding normal tissue by infrared spectroscopic analysis. Methods Methanolic extracts of Azadirachta indica, Ocimum sanctum, Aloe barbandesis, Tinospora cordifolia and Triticum aestivum were assessed for the isolation and purification of active compound. After that, combine crude and combine isolated samples were prepared. Skin tumor was induced by topical application of 7, 12-dimethyl benz (a) anthracene and promoted by croton oil in Swiss albino mice. To assess the chemopreventive potential of different drugs, it was administered at a concentration of 400 mg/kg body weight daily up to 16 weeks. Fourier transform infrared spectroscopy analysis was used to differentiate the drug treated tissues with the normal and cancerous tissue. In the present study, spectra of different tissues were recorded in the range of 400-4 000 cm−1. Results The results of the present study have shown that the remarkable difference exists between the IR spectra of normal, drugs treated and cancerous tissue in terms of frequencies and intensities of prominent bands of cellular biomolecules. Conclusions Fourier transform infrared spectroscopy analysis suggests the chemopreventive effect of above treated drugs and the best result was observed in combine crude sample and in combine isolated sample or synergistic effect of individual crude and isolated extract in 7, 12-dimethyl benz (a) anthracene croton oil induced skin carcinogenesis in Swiss albino mice.

  16. Recognizing brain activities by functional near-infrared spectroscope signal analysis

    PubMed Central

    Khoa, Truong Quang Dang; Nakagawa, Masahiro

    2008-01-01

    Background Functional Near-Infrared Spectroscope (fNIRs) is one of the latest technologies which utilize light in the near-infrared range to determine brain activities. Near-infrared technology allows design of safe, portable, wearable, non-invasive and wireless qualities monitoring systems. This indicates that fNIRs signal monitoring of brain hemodynamics can be value in helping to understand brain tasks. In this paper, we present results of fNIRs signal analysis to show that there exist distinct patterns of hemodynamic responses which recognize brain tasks toward developing a Brain-Computer interface. Results We applied Higuchi's fractal dimension algorithms to analyse irregular and complex characteristics of fNIRs signals, and then Wavelets transform is used to analysis for preprocessing as signal filters and feature extractions and Neural networks is a module for cognition brain tasks. Conclusion Throughout two experiments, we have demonstrated the feasibility of fNIRs analysis to recognize human brain activities. PMID:18590571

  17. Simulation and Optimization of Synchrotron Infrared Micro-Spectroscopic Beamlines using Wave Optics Computation: ESRF and SOLEIL's Cases

    SciTech Connect

    Chubar, O.; Polack, F.; Lagarde, B.; Dumas, P.; Susini, J.; Cotte, M.; Scheidt, K.; Elleaume, P.

    2007-01-19

    Applications of the 'Synchrotron Radiation Workshop' (SRW) computer code to the design and optimization of the mid-infrared micro-spectroscopic beamlines at the ESRF and SOLEIL storage ring are described. The agreement found between SRW simulation, at various positions from the source to the spectrometer, ray tracing calculations and intensity profile measurements demonstrates that SRW is readily an excellent approach to optimize any synchrotron infrared beamline.

  18. Infrared Spectroscopic Study of Vibrational Modes in Methylammonium Lead Halide Perovskites.

    PubMed

    Glaser, Tobias; Müller, Christian; Sendner, Michael; Krekeler, Christian; Semonin, Octavi E; Hull, Trevor D; Yaffe, Omer; Owen, Jonathan S; Kowalsky, Wolfgang; Pucci, Annemarie; Lovrinčić, Robert

    2015-08-06

    The organic cation and its interplay with the inorganic lattice underlie the exceptional optoelectronic properties of organo-metallic halide perovskites. Herein we report high-quality infrared spectroscopic measurements of methylammonium lead halide perovskite (CH3NH3Pb(I/Br/Cl)3) films and single crystals at room temperature, from which the dielectric function in the investigated spectral range is derived. Comparison with electronic structure calculations in vacuum of the free methylammonium cation allows for a detailed peak assignment. We analyze the shifts of the vibrational peak positions between the different halides and infer the extent of interaction between organic moiety and the surrounding inorganic cage. The positions of the NH3(+) stretching vibrations point to significant hydrogen bonding between the methylammonium and the halides for all three perovskites.

  19. SEM, EDX, infrared and Raman spectroscopic characterization of the silicate mineral yuksporite.

    PubMed

    Frost, Ray L; López, Andrés; Scholz, Ricardo; Theiss, Frederick L; Romano, Antônio Wilson

    2015-02-25

    The mineral yuksporite (K,Ba)NaCa2(Si,Ti)4O11(F,OH)⋅H2O has been studied using the combination of SEM with EDX and vibrational spectroscopic techniques of Raman and infrared spectroscopy. Scanning electron microscopy shows a single pure phase with cleavage fragment up to 1.0 mm. Chemical analysis gave Si, Al, K, Na and Ti as the as major elements with small amounts of Mn, Ca, Fe and REE. Raman bands are observed at 808, 871, 930, 954, 980 and 1087 cm(-1) and are typical bands for a natural zeolite. Intense Raman bands are observed at 514, 643 and 668 cm(-1). A very sharp band is observed at 3668 cm(-1) and is attributed to the OH stretching vibration of OH units associated with Si and Ti. Raman bands resolved at 3298, 3460, 3562 and 3628 cm(-1) are assigned to water stretching vibrations.

  20. Pectin functionalised by fatty acids: Diffuse reflectance infrared Fourier transform (DRIFT) spectroscopic characterisation

    NASA Astrophysics Data System (ADS)

    Kamnev, Alexander A.; Calce, Enrica; Tarantilis, Petros A.; Tugarova, Anna V.; De Luca, Stefania

    2015-01-01

    Chemically modified pectin derivatives obtained by partial esterification of its hydroxyl moieties with fatty acids (FA; oleic, linoleic and palmitic acids), as well as the initial apple peel pectin were comparatively characterised using diffuse reflectance infrared Fourier transform (DRIFT) spectroscopy. Characteristic changes observed in DRIFT spectra in going from pectin to its FA esters are related to the corresponding chemical modifications. Comparing the DRIFT spectra with some reported data on FTIR spectra of the same materials measured in KBr or NaCl matrices has revealed noticeable shifts of several polar functional groups both in pectin and in its FA-esterified products induced by the halide salts. The results obtained have implications for careful structural analyses of biopolymers with hydrophilic functional groups by means of different FTIR spectroscopic methodologies.

  1. Near-infrared spectroscopic determination of degradation in vegetable oils used to fry various foods.

    PubMed

    Ng, Choo Lum; Wehling, Randy L; Cuppett, Susan L

    2011-12-14

    Near-infrared (NIR) spectroscopic methods for measuring degradation products, including total polar materials (TPMs) and free fatty acids (FFAs), in soy-based frying oil used for frying various foods have been successfully developed. Calibration models were developed using forward stepwise multiple linear regression (FSMLR) and partial least-squares (PLS) regression techniques and then tested with an independent set of validation samples. The results show that the quality of oil used for frying different foods can be measured with a single model. First-derivative treatments improved results for TPM measurement. In addition, PLS models gave better prediction results than FSMLR models. For PLS models, the best correlations (r) between the NIR-predicted data and the chemical method data for TPMs and FFAs in oils were 0.995 and 0.981, respectively. For FSMLR models, the best r values for TPMs and FFAs in oils were 0.993 and 0.963, respectively.

  2. High-definition Fourier transform infrared spectroscopic imaging of prostate tissue

    NASA Astrophysics Data System (ADS)

    Wrobel, Tomasz P.; Kwak, Jin Tae; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2016-03-01

    Histopathology forms the gold standard for cancer diagnosis and therapy, and generally relies on manual examination of microscopic structural morphology within tissue. Fourier-Transform Infrared (FT-IR) imaging is an emerging vibrational spectroscopic imaging technique, especially in a High-Definition (HD) format, that provides the spatial specificity of microscopy at magnifications used in diagnostic surgical pathology. While it has been shown for standard imaging that IR absorption by tissue creates a strong signal where the spectrum at each pixel is a quantitative "fingerprint" of the molecular composition of the sample, here we show that this fingerprint also enables direct digital pathology without the need for stains or dyes for HD imaging. An assessment of the potential of HD imaging to improve diagnostic pathology accuracy is presented.

  3. SEM, EDX, Infrared and Raman spectroscopic characterization of the silicate mineral yuksporite

    NASA Astrophysics Data System (ADS)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo; Theiss, Frederick L.; Romano, Antônio Wilson

    2015-02-01

    The mineral yuksporite (K,Ba)NaCa2(Si,Ti)4O11(F,OH)ṡH2O has been studied using the combination of SEM with EDX and vibrational spectroscopic techniques of Raman and infrared spectroscopy. Scanning electron microscopy shows a single pure phase with cleavage fragment up to 1.0 mm. Chemical analysis gave Si, Al, K, Na and Ti as the as major elements with small amounts of Mn, Ca, Fe and REE. Raman bands are observed at 808, 871, 930, 954, 980 and 1087 cm-1 and are typical bands for a natural zeolite. Intense Raman bands are observed at 514, 643 and 668 cm-1. A very sharp band is observed at 3668 cm-1 and is attributed to the OH stretching vibration of OH units associated with Si and Ti. Raman bands resolved at 3298, 3460, 3562 and 3628 cm-1 are assigned to water stretching vibrations.

  4. Infrared spectroscopic measurement of skin hydration and sebum levels and comparison to corneometer and sebumeter

    NASA Astrophysics Data System (ADS)

    Ezerskaia, Anna; Pereira, S. F.; Urbach, H. P.; Varghese, Babu

    2016-05-01

    Skin health characterized by a system of water and lipids in Stratum Corneum provide protection from harmful external elements and prevent trans-epidermal water loss. Skin hydration (moisture) and sebum (skin surface lipids) are considered to be important factors in skin health; a right balance between these components is an indication of skin health and plays a central role in protecting and preserving skin integrity. In this manuscript we present an infrared spectroscopic method for simultaneous and quantitative measurement of skin hydration and sebum levels utilizing differential detection with three wavelengths 1720, 1750, and 1770 nm, corresponding to the lipid vibrational bands that lie "in between" the prominent water absorption bands. The skin sebum and hydration values on the forehead under natural conditions and its variations to external stimuli were measured using our experimental set-up. The experimental results obtained with the optical set-up show good correlation with the results obtained with the commercially available instruments Corneometer and Sebumeter.

  5. THE NASA AMES POLYCYCLIC AROMATIC HYDROCARBON INFRARED SPECTROSCOPIC DATABASE: THE COMPUTED SPECTRA

    SciTech Connect

    Bauschlicher, C. W.; Ricca, A.; Boersma, C.; Mattioda, A. L.; Cami, J.; Peeters, E.; Allamandola, L. J.; Sanchez de Armas, F.; Puerta Saborido, G.; Hudgins, D. M.

    2010-08-15

    The astronomical emission features, formerly known as the unidentified infrared bands, are now commonly ascribed to polycyclic aromatic hydrocarbons (PAHs). The laboratory experiments and computational modeling done at the NASA Ames Research Center to create a collection of PAH IR spectra relevant to test and refine the PAH hypothesis have been assembled into a spectroscopic database. This database now contains over 800 PAH spectra spanning 2-2000 {mu}m (5000-5 cm{sup -1}). These data are now available on the World Wide Web at www.astrochem.org/pahdb. This paper presents an overview of the computational spectra in the database and the tools developed to analyze and interpret astronomical spectra using the database. A description of the online and offline user tools available on the Web site is also presented.

  6. Development of an ultrahigh-performance infrared detector platform for advanced spectroscopic sensing systems

    NASA Astrophysics Data System (ADS)

    Jain, Manish; Wicks, Gary; Marshall, Andrew; Craig, Adam; Golding, Terry; Hossain, Khalid; McEwan, Ken; Howle, Chris

    2014-05-01

    Laser-based stand-off sensing of threat agents (e.g. explosives, toxic industrial chemicals or chemical warfare agents), by detection of distinct infrared spectral absorption signature of these materials, has made significant advances recently. This is due in part to the availability of infrared and terahertz laser sources with significantly improved power and tunability. However, there is a pressing need for a versatile, high performance infrared sensor that can complement and enhance the recent advances achieved in laser technology. This work presents new, high performance infrared detectors based on III-V barrier diodes. Unipolar barrier diodes, such as the nBn, have been very successful in the MWIR using InAs(Sb)-based materials, and in the MWIR and LWIR using type-II InAsSb/InAs superlattice-based materials. This work addresses the extension of the barrier diode architecture into the SWIR region, using GaSb-based and InAs-based materials. The program has resulted in detectors with unmatched performance in the 2-3 μm spectral range. Temperature dependent characterization has shown dark currents to be diffusion limited and equal to, or within a factor of 5, of the Rule 07 expression for Auger-limited HgCdTe detectors. Furthermore, D* values are superior to those of existing detectors in the 2-3 μm band. Of particular significance to spectroscopic sensing systems is the ability to have near-background limited performance at operation temperatures compatible with robust and reliable solid state thermoelectric coolers.

  7. Mercury And The Moon: Mid-infrared Spectroscopic Measurements Of The Surface

    NASA Astrophysics Data System (ADS)

    Donaldson Hanna, Kerri L.; Sprague, A. L.; Kozlowski, R. W.; Boccafolo, K.; Helbert, J.; Maturilli, A.; Warell, J.

    2006-09-01

    Spectroscopic observations (7.5 - 13 μm) of Mercury and the Moon obtained with MIRSI (Mid-Infrared Spectrometer and Imager) at the NASA Infrared Telescope Facility (IRTF) are presented. The spectra were acquired at mercurian W. longitudes 172 - 282° covering north polar to south polar latitudes. Also acquired were lunar surface measurements of the Apollo 16 landing site and Grimaldi basin and highlands. Mercury measurements covered Caloris Basin, Basin S, and other regions on the side not imaged by Mariner 10. Lunar locations were chosen for their known surface compositions determined from near-infrared spectral telescopic observations and Apollo return samples. Spectra for both bodies were reduced with the same calibration star to minimize reduction differences. Spectral differences between the mercurian locations indicate a heterogeneous composition and differences between Mercury and lunar spectra indicate compositional differences between the two bodies. All collected spectra from Mercury and the Moon show distinct and recognizable features including the Christiansen emissivity maximum and one or more transmission minima. Other features have yet to be identified. True emission spectra of rock and mineral powders with varying grain sizes will be presented for comparison with the data. Acknowledgements: The authors of this paper were Visiting Astronomers at the Infrared Telescope Facility, which is operated by the University of Hawaii under Cooperative Agreement no. NCC 5-538 with the National Aeronautics and Space Administration, Science Mission Directorate, Planetary Astronomy Program. We are especially grateful to Alan Tokunaga and Eric Tollestrup for useful engineering time on the telescope and Don Hunten for helpful discussions. This work was supported by NSF grant AST-0406796.

  8. Infrared and Raman spectroscopic studies on alkali borate glasses: evidence of mixed alkali effect.

    PubMed

    Padmaja, G; Kistaiah, P

    2009-03-19

    A lithium-potassium-borate glass system containing manganese and iron cations has been thoroughly investigated in order to obtain information about the mixed alkali effect and the structural role of both the manganese and iron in such glass hosts. Mixed alkali borate glasses of the (30 - x)Li(2)O - xK(2)O - 10CdO/ZnO - 59B(2)O(3) (x = 0, 10, 15, 20, and 30) doped with 1MnO(2)/1Fe(2)O(3) system were prepared by a melt quench technique. The amorphous phase of the prepared glass samples was confirmed from their X-ray diffraction. The spectroscopic properties of glass samples were studied using infrared (IR) and Raman spectroscopic techniques. The density of all the prepared glasses was measured using Archimedes principle. Molar volumes were estimated from the density data. IR spectra of these glasses revealed a dramatic variation of three- and four-coordinated boron structures as a function of mixed alkali concentration. The vibrations due to Li-O, K-O, and MnO(4)/FeO(4) arrangements are consistent in all the compositions and show a nonlinear variation in the intensity with alkali content. Raman spectra of different alkali combinations with CdO and ZnO present drastic changes in the intensity of various Raman bands. The observation of disappearance and reappearance of IR and Raman bands as a function of various alkali concentrations is an important result pertaining to the mixed alkali effect in borate glasses. Acting as complementary spectroscopic techniques, both types of measurements, IR and Raman, revealed that the network structure of the studied glasses is mainly based on BO(3) and BO(4) units placed in different structural groups, the BO(3) units being dominant. The measured IR and Raman spectra of different glasses are used to clarify the optical properties of the present glasses correlating them with their structure and composition.

  9. DISCOVERY OF THREE DISTANT, COLD BROWN DWARFS IN THE WFC3 INFRARED SPECTROSCOPIC PARALLELS SURVEY

    SciTech Connect

    Masters, D.; Siana, B.; McCarthy, P.; Hathi, N. P.; Dressler, A.; Burgasser, A. J.; Malkan, M.; Ross, N. R.; Scarlata, C.; Henry, A.; Colbert, J.; Atek, H.; Rafelski, M.; Teplitz, H.; Bunker, A.

    2012-06-10

    We present the discovery of three late-type ({>=}T4.5) brown dwarfs, including a probable Y dwarf, in the WFC3 Infrared Spectroscopic Parallels (WISP) survey. We use the G141 grism spectra to determine the spectral types of the dwarfs and derive distance estimates based on a comparison with nearby T dwarfs with known parallaxes. These are the most distant spectroscopically confirmed T/Y dwarfs, with the farthest at an estimated distance of {approx}400 pc. We compare the number of cold dwarfs found in the WISP survey with simulations of the brown dwarf mass function. The number found is generally consistent with an initial stellar mass function dN/dM{proportional_to}M{sup -{alpha}} with {alpha} = 0.0-0.5, although the identification of a Y dwarf is somewhat surprising and may be indicative of either a flatter absolute magnitude/spectral-type relation than previously reported or an upturn in the number of very-late-type brown dwarfs in the observed volume.

  10. A NEAR-INFRARED SPECTROSCOPIC STUDY OF YOUNG FIELD ULTRACOOL DWARFS

    SciTech Connect

    Allers, K. N.; Liu, Michael C.

    2013-08-01

    We present a near-infrared (0.9-2.4 {mu}m) spectroscopic study of 73 field ultracool dwarfs having spectroscopic and/or kinematic evidence of youth ( Almost-Equal-To 10-300 Myr). Our sample is composed of 48 low-resolution (R Almost-Equal-To 100) spectra and 41 moderate-resolution spectra (R {approx}> 750-2000). First, we establish a method for spectral typing M5-L7 dwarfs at near-IR wavelengths that is independent of gravity. We find that both visual and index-based classification in the near-IR provides consistent spectral types with optical spectral types, though with a small systematic offset in the case of visual classification at J and K band. Second, we examine features in the spectra of {approx}10 Myr ultracool dwarfs to define a set of gravity-sensitive indices based on FeH, VO, K I, Na I, and H-band continuum shape. We then create an index-based method for classifying the gravities of M6-L5 dwarfs that provides consistent results with gravity classifications from optical spectroscopy. Our index-based classification can distinguish between young and dusty objects. Guided by the resulting classifications, we propose a set of low-gravity spectral standards for the near-IR. Finally, we estimate the ages corresponding to our gravity classifications.

  11. Rapid calibration of near-infrared spectroscopic measurements of mammalian cell cultivations.

    PubMed

    Riley, M R; Okeson, C D; Frazier, B L

    1999-01-01

    Near-infrared (NIR) spectroscopy is a flexible method that can be employed to noninvasively monitor the concentrations of multiple nutrients and wastes in mammalian cell bioreactors. Development of suitable calibrations can be a labor- and time-intensive process that must be repeated when process conditions are altered significantly. To address this difficulty, we have produced a new approach for generating NIR spectroscopic calibrations that requires significantly less time compared with standard calibration schemes. This method reduces development time from the present level of several weeks to several hours. A small number of experimentally collected spectra serve as inputs to a computational procedure that yields a large number of simulated spectra, each containing both analyte-specific and analyte-independent information. Such simulated spectra may be employed as a calibration set for quantifying analytes in experimentally collected spectra. Spectroscopic measurements of the concentrations of five components (ammonia, glucose, glutamate, glutamine, and lactate) can be accomplished with levels of error similar to those obtained with full experimental calibrations. A key to this process is the utilization of random numbers, which randomizes the influence of natural variations, present in each experimentally collected spectrum, on the resultant composite spectrum. This approach may increase the feasibility of employing NIR spectroscopy to monitor bioreactors and other biological processes subjected to varying operating conditions.

  12. Electronic Time-Gated and Spectroscopic Near-Infrared Imaging of Lesions in Human Tissues*

    NASA Astrophysics Data System (ADS)

    Gayen, S. K.; Alrubaiee, M.; Alfano, R. R.; Koutcher, J.; Savage, H.

    2000-03-01

    Near-infrared (NIR) transillumination imaging is used to investigate normal and cancerous tissues of human breast, thyroid, and parotid gland. The time-sliced imaging arrangement uses 130-fs, 1 kHz repetition-rate, 800 nm pulses from a Ti:sapphire laser and amplifier system for sample illumination and a CCD camera coupled to a gated image intensifier for recording two-dimensional (2D) images. Images recorded with earlier temporal slices of transmitted light highlight cancerous tissues while those recorded with later slices accentuate normal fibrous tissues. The spectroscopic imaging arrangement uses 1210-1300 nm tunable output of a Cr:forsterite laser for sample illumination, a Fourier space gate to discriminate against multiple-scattered light, and a NIR area camera to record 2D images. When light is tuned to a known absorption resonance of a particular tissue type, a marked enhancement in image contrast is observed which is indicative of the diagnostic potential of spectroscopic imaging.

  13. Spectroscopic technique with wide range of wavelength information improves near-infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Eda, Hideo; Aoki, Hiromichi; Eura, Shigeru; Ebe, Kazutoshi

    2009-02-01

    Near-infrared spectroscopy (NIRS) calculates hemoglobin parameters, such as oxygenated hemoglobin (oxyHb) and deoxygenated hemoglobin (deoxyHb) using the near-infrared light around the wavelength of 800nm. This is based on the modified-Lambert-Beer's law that changes in absorbance are proportional to changes in hemoglobin parameters. Many conventional measurement methods uses only a few wavelengths, however, in this research, basic examination of NIRS measurement was approached by acquiring wide range of wavelength information. Venous occlusion test was performed by using the blood pressure cuff around the upper arm. Pressure of 100mmHg was then applied for about 3 minutes. During the venous occlusion, the spectrum of the lower arm muscles was measured every 15 seconds, within the range of 600 to 1100nm. It was found that other wavelength bands hold information correlating to this venous occlusion task. Technique of improving the performance of NIRS measurement using the Spectroscopic Method is very important for Brain science.

  14. A Near-Infrared Spectroscopic Survey of 886 Nearby M Dwarfs

    NASA Astrophysics Data System (ADS)

    Terrien, Ryan C.; Mahadevan, Suvrath; Deshpande, Rohit; Bender, Chad F.

    2015-09-01

    We present a catalog of near-infrared (NIR) spectra and associated measurements for 886 nearby M dwarfs. The spectra were obtained with the NASA-Infrared Telescope Facility SpeX Spectrograph during a two-year observing campaign; they have high signal-to-noise ratios (S/N > 100-150), span 0.8-2.4 μm, and have R˜ 2000. Our catalog of measured values contains useful Teff and composition-sensitive features, empirical stellar parameter measurements, and kinematic, photometric, and astrometric properties compiled from the literature. We focus on measurements of M dwarf abundances ([Fe/H] and [M/H]), capitalizing on the precision of recently published empirical NIR spectroscopic calibrations. We explore systematic differences between different abundance calibrations, and from other similar M dwarf catalogs. We confirm that the M dwarf abundances we measure show the expected inverse dependence with kinematic-, activity-, and color-based age indicators. Finally, we provide updated [Fe/H] and [M/H] for 16 M dwarf planet hosts. This catalog represents the largest published compilation of NIR spectra and associated parameters for M dwarfs. It provides a rich and uniform resource for nearby M dwarfs, and will be especially valuable for measuring Habitable Zone locations and comparative abundances of the M dwarf planet hosts that will be uncovered by upcoming exoplanet surveys.

  15. Mid-infrared Spectroscopic Observations of the Dust-forming Classical Nova V2676 Oph

    NASA Astrophysics Data System (ADS)

    Kawakita, Hideyo; Ootsubo, Takafumi; Arai, Akira; Shinnaka, Yoshiharu; Nagashima, Masayoshi

    2017-02-01

    The dust-forming nova V2676 Oph is unique in that it was the first nova to provide evidence of C2 and CN molecules during its near-maximum phase and evidence of CO molecules during its early decline phase. Observations of this nova have revealed the slow evolution of its lightcurves and have also shown low isotopic ratios of carbon (12C/13C) and nitrogen (14N/15N) in its envelope. These behaviors indicate that the white dwarf (WD) star hosting V2676 Oph is a CO-rich WD rather than an ONe-rich WD (typically larger in mass than the former). We performed mid-infrared spectroscopic and photometric observations of V2676 Oph in 2013 and 2014 (respectively 452 and 782 days after its discovery). No significant [Ne ii] emission at 12.8 μm was detected at either epoch. These provided evidence for a CO-rich WD star hosting V2676 Oph. Both carbon-rich and oxygen-rich grains were detected in addition to an unidentified infrared feature at 11.4 μm originating from polycyclic aromatic hydrocarbon molecules or hydrogenated amorphous carbon grains in the envelope of V2676 Oph. Based on data collected at the Subaru Telescope, which is operated by the National Astronomical Observatory of Japan.

  16. A near-infrared high-resolution spectroscopic survey of Galactic bulge stars . - JASMINE prestudy -

    NASA Astrophysics Data System (ADS)

    Tsujimoto, T.; Kobayashi, N.; Ikeda, Y.; Kondo, S.; Yasui, C.; Minami, A.; Motohara, K.; Gouda, N.

    We are developing a new near-infrared high-resolution (R_max= 100,000) and high-sensitive spectrograph WINERED, which is specifically customized for short NIR bands at 0.9-1.35 mu m. WINERED employs the novelty in the optical system; a portable design with a near-infrared immersion grating and warm optics without any cold stops. The planned astrometric space mission JASMINE will provide the exact positions, distances, and proper motions of the Galactic bulge stars. The missing components, the radial velocity and chemical compositions, will be measured by WINERED with high accuracies (delta V< 10km/s). These combined data brought by JASMINE and WINERED will certainly reveal the nature of the Galactic bulge. We plan to complete this instrument with a single slit by the end of 2008 and hope to attach it to various 4-10 m telescopes as a PI-type instrument. In succession, we plan to develop a similar spectrograph but with a simultaneous multi-object spectroscopic capability for full-fledged bulge survey.

  17. Infrared spectroscopic characterization of monocytic microvesicles (microparticles) released upon lipopolysaccharide stimulation.

    PubMed

    Lee, Joonsup; Wen, Beryl; Carter, Elizabeth A; Combes, Valery; Grau, Georges E R; Lay, Peter A

    2017-03-17

    Microvesicles (MVs) are involved in cell-cell interactions, including disease pathogenesis. Nondestructive Fourier-transform infrared (FTIR) spectra from MVs were assessed as a technique to provide new biochemical insights into a LPS-induced monocyte model of septic shock. FTIR spectroscopy provided a quick method to investigate relative differences in biomolecular content of different MV populations that was complementary to traditional semiquantitative omics approaches, with which it is difficult to provide information on relative changes between classes (proteins, lipids, nucleic acids, carbohydrates) or protein conformations. Time-dependent changes were detected in biomolecular contents of MVs and in the monocytes from which they were released. Differences in phosphatidylcholine and phosphatidylserine contents were observed in MVs released under stimulation, and higher relative concentrations of RNA and α-helical structured proteins were present in stimulated MVs compared with MVs from resting cells. FTIR spectra of stimulated monocytes displayed changes that were consistent with those observed in the corresponding MVs they released. LPS-stimulated monocytes had reduced concentrations of nucleic acids, α-helical structured proteins, and phosphatidylcholine compared with resting monocytes but had an increase in total lipids. FTIR spectra of MV biomolecular content will be important in shedding new light on the mechanisms of MVs and the different roles they play in physiology and disease pathogenesis.-Lee, J., Wen, B., Carter, E. A., Combes, V., Grau, G. E. R., Lay. P. A. Infrared spectroscopic characterization of monocytic microvesicles (microparticles) released upon lipopolysaccharide stimulation.

  18. Spectroscopic Study of Terahertz Generation in Mid-Infrared Quantum Cascade Lasers

    PubMed Central

    Jiang, Yifan; Vijayraghavan, Karun; Jung, Seungyong; Jiang, Aiting; Kim, Jae Hyun; Demmerle, Frederic; Boehm, Gerhard; Amann, Markus C.; Belkin, Mikhail A.

    2016-01-01

    Terahertz quantum cascade laser sources based on intra-cavity difference-frequency generation are currently the only room-temperature mass-producible diode-laser-like emitters of coherent 1–6 THz radiation. Device performance has improved dramatically over the past few years to reach milliwatt-level power output and broad tuning from 1.2 to 5.9 THz, all at room-temperature. Terahertz output in these sources originates from intersubband optical nonlinearity in the laser active region. Here we report the first comprehensive spectroscopic study of the optical nonlinearity and investigate its dependence on the mid-infrared pump frequencies. Our work shows that the terahertz generation efficiency can vary by a factor of 2 or greater depending on the spectral position of the mid-infrared pumps for a fixed THz difference-frequency. We have also measured for the first time the linewidth for transitions between the lower quantum cascade laser states, which is critical for determining terahertz nonlinearity and predicting optical loss in quantum cascade laser waveguides. PMID:26879901

  19. Near infrared spectroscopic calibration models for real time monitoring of powder density.

    PubMed

    Román-Ospino, Andrés D; Singh, Ravendra; Ierapetritou, Marianthi; Ramachandran, Rohit; Méndez, Rafael; Ortega-Zuñiga, Carlos; Muzzio, Fernando J; Romañach, Rodolfo J

    2016-10-15

    Near infrared spectroscopic (NIRS) calibration models for real time prediction of powder density (tap, bulk and consolidated) were developed for a pharmaceutical formulation. Powder density is a critical property in the manufacturing of solid oral dosages, related to critical quality attributes such as tablet mass, hardness and dissolution. The establishment of calibration techniques for powder density is highly desired towards the development of control strategies. Three techniques were evaluated to obtain the required variation in powder density for calibration sets: 1) different tap density levels (for a single component), 2) generating different strain levels in powders blends (and as consequence powder density), through a modified shear Couette Cell, and 3) applying normal forces during a compressibility test with a powder rheometer to a pharmaceutical blend. For each variation in powder density, near infrared spectra were acquired to develop partial least squares (PLS) calibration models. Test samples were predicted with a relative standard error of prediction of 0.38%, 7.65% and 0.93% for tap density (single component), shear and rheometer respectively. Spectra obtained in real time in a continuous manufacturing (CM) plant were compared to the spectra from the three approaches used to vary powder density. The calibration based on the application of different strain levels showed the greatest similarity with the blends produced in the CM plant.

  20. An in situ infrared spectroscopic investigation of the pyrolysis of ethylene glycol encapsulated in silica sodalite.

    SciTech Connect

    Maroni, V. A.; Epperson, S. J.; Chemical Engineering; Univ. of Tulsa

    2001-11-29

    The thermal stability and pyrolysis of ethylene glycol (EG) encapsulated in the sodalite cages of all-silica sodalite were studied by diffuse reflectance infrared Fourier transform (DRIFT) spectroscopy and transmission infrared spectroscopy. Evidence for the presence of encapsulated CO2 formed as a result of partial decomposition of EG molecules was observed starting at about 600 K. Complete, irreversible pyrolysis of the EG occurred between 675 and 775 K. After treatment at 775 K, the CO2 remained encapsulated in the sodalite framework, even though there were spectroscopic indications that the pyrolysis caused a disordering of the sodalite framework. There appeared to be a temperature dependence of the conformational interactions of the EG O---H groups up to 600 K, which was mainly manifested as a weakening of intramolecular hydrogen bonding. The only detectable encapsulated products of the EG decomposition in an inert (N2 or Ar) environment were CO2 and a carbonaceous (coke- or soot-like) residue. There was no evidence of other encapsulated products, such as CO, H2, H2O, or light hydrocarbons.

  1. Fourier transform infrared spectroscopic imaging of cardiac tissue to detect collagen deposition after myocardial infarction

    NASA Astrophysics Data System (ADS)

    Cheheltani, Rabee; Rosano, Jenna M.; Wang, Bin; Sabri, Abdel Karim; Pleshko, Nancy; Kiani, Mohammad F.

    2012-05-01

    Myocardial infarction often leads to an increase in deposition of fibrillar collagen. Detection and characterization of this cardiac fibrosis is of great interest to investigators and clinicians. Motivated by the significant limitations of conventional staining techniques to visualize collagen deposition in cardiac tissue sections, we have developed a Fourier transform infrared imaging spectroscopy (FT-IRIS) methodology for collagen assessment. The infrared absorbance band centered at 1338 cm-1, which arises from collagen amino acid side chain vibrations, was used to map collagen deposition across heart tissue sections of a rat model of myocardial infarction, and was compared to conventional staining techniques. Comparison of the size of the collagen scar in heart tissue sections as measured with this methodology and that of trichrome staining showed a strong correlation (R=0.93). A Pearson correlation model between local intensity values in FT-IRIS and immuno-histochemical staining of collagen type I also showed a strong correlation (R=0.86). We demonstrate that FT-IRIS methodology can be utilized to visualize cardiac collagen deposition. In addition, given that vibrational spectroscopic data on proteins reflect molecular features, it also has the potential to provide additional information about the molecular structure of cardiac extracellular matrix proteins and their alterations.

  2. Predicting future space near-IR grism surveys using the WFC3 infrared spectroscopic parallels survey

    SciTech Connect

    Colbert, James W.; Atek, Hakim; Teplitz, Harry; Rafelski, Marc; Bunker, Andrew; Ross, Nathaniel; Malkan, Matt; Scarlata, Claudia; Bedregal, Alejandro G.; Dominguez, Alberto; Masters, Dan; Siana, Brian; Dressler, Alan; McCarthy, Patrick; Henry, Alaina; Martin, Crystal L.

    2013-12-10

    We present near-infrared emission line counts and luminosity functions from the Hubble Space Telescope Wide Field Camera 3 Infrared Spectroscopic Parallels (WISP) program for 29 fields (0.037 deg{sup 2}) observed using both the G102 and G141 grism. Altogether we identify 1048 emission line galaxies with observed equivalent widths greater than 40 Å, 467 of which have multiple detected emission lines. We use simulations to correct for significant (>20%) incompleteness introduced in part by the non-dithered, non-rotated nature of the grism parallels. The WISP survey is sensitive to fainter flux levels ((3-5) × 10{sup –17} erg s{sup –1} cm{sup –2}) than the future space near-infrared grism missions aimed at baryonic acoustic oscillation cosmology ((1-4) × 10{sup –16} erg s{sup –1} cm{sup –2}), allowing us to probe the fainter emission line galaxies that the shallower future surveys may miss. Cumulative number counts of 0.7 < z < 1.5 galaxies reach 10,000 deg{sup –2} above an Hα flux of 2 × 10{sup –16} erg s{sup –1} cm{sup –2}. Hα-emitting galaxies with comparable [O III] flux are roughly five times less common than galaxies with just Hα emission at those flux levels. Galaxies with low Hα/[O III] ratios are very rare at the brighter fluxes that future near-infrared grism surveys will probe; our survey finds no galaxies with Hα/[O III] < 0.95 that have Hα flux greater than 3 × 10{sup –16} erg s{sup –1} cm{sup –2}. Our Hα luminosity function contains a comparable number density of faint line emitters to that found by the Near IR Camera and Multi-Object Spectrometer near-infrared grism surveys, but significantly fewer (factors of 3-4 less) high-luminosity emitters. We also find that our high-redshift (z = 0.9-1.5) counts are in agreement with the high-redshift (z = 1.47) narrowband Hα survey of HiZELS (Sobral et al.), while our lower redshift luminosity function (z = 0.3-0.9) falls slightly below their z = 0.84 result. The evolution

  3. Predicting Future Space Near-IR Grism Surveys Using the WFC3 Infrared Spectroscopic Parallels Survey

    NASA Astrophysics Data System (ADS)

    Colbert, James W.; Teplitz, Harry; Atek, Hakim; Bunker, Andrew; Rafelski, Marc; Ross, Nathaniel; Scarlata, Claudia; Bedregal, Alejandro G.; Dominguez, Alberto; Dressler, Alan; Henry, Alaina; Malkan, Matt; Martin, Crystal L.; Masters, Dan; McCarthy, Patrick; Siana, Brian

    2013-12-01

    We present near-infrared emission line counts and luminosity functions from the Hubble Space Telescope Wide Field Camera 3 Infrared Spectroscopic Parallels (WISP) program for 29 fields (0.037 deg2) observed using both the G102 and G141 grism. Altogether we identify 1048 emission line galaxies with observed equivalent widths greater than 40 Å, 467 of which have multiple detected emission lines. We use simulations to correct for significant (>20%) incompleteness introduced in part by the non-dithered, non-rotated nature of the grism parallels. The WISP survey is sensitive to fainter flux levels ((3-5) × 10-17 erg s-1 cm-2) than the future space near-infrared grism missions aimed at baryonic acoustic oscillation cosmology ((1-4) × 10-16 erg s-1 cm-2), allowing us to probe the fainter emission line galaxies that the shallower future surveys may miss. Cumulative number counts of 0.7 < z < 1.5 galaxies reach 10,000 deg-2 above an Hα flux of 2 × 10-16 erg s-1 cm-2. Hα-emitting galaxies with comparable [O III] flux are roughly five times less common than galaxies with just Hα emission at those flux levels. Galaxies with low Hα/[O III] ratios are very rare at the brighter fluxes that future near-infrared grism surveys will probe; our survey finds no galaxies with Hα/[O III] < 0.95 that have Hα flux greater than 3 × 10-16 erg s-1 cm-2. Our Hα luminosity function contains a comparable number density of faint line emitters to that found by the Near IR Camera and Multi-Object Spectrometer near-infrared grism surveys, but significantly fewer (factors of 3-4 less) high-luminosity emitters. We also find that our high-redshift (z = 0.9-1.5) counts are in agreement with the high-redshift (z = 1.47) narrowband Hα survey of HiZELS (Sobral et al.), while our lower redshift luminosity function (z = 0.3-0.9) falls slightly below their z = 0.84 result. The evolution in both the Hα luminosity function from z = 0.3-1.5 and the [O III] luminosity function from z = 0.7-2.3 is

  4. Dipole-active optical phonons in YTiO3 : Ellipsometry study and lattice-dynamics calculations

    NASA Astrophysics Data System (ADS)

    Kovaleva, N. N.; Boris, A. V.; Capogna, L.; Gavartin, J. L.; Popovich, P.; Yordanov, P.; Maljuk, A.; Stoneham, A. M.; Keimer, B.

    2009-01-01

    The anisotropic complex dielectric response was accurately extracted from spectroscopic ellipsometry measurements at phonon frequencies for the three principal crystallographic directions of an orthorhombic (Pbnm) YTiO3 single crystal. We identify all 25 infrared-active phonon modes allowed by symmetry 7B1u , 9B2u , and 9B3u polarized along the c , b , and a axes, respectively. From a classical dispersion analysis of the complex dielectric functions γ˜(ω) and their inverses -1/γ˜(ω) , we define the resonant frequencies, widths, and oscillator strengths of the transverse-optical (TO) and longitudinal-optical phonon modes. We calculate eigenfrequencies and eigenvectors of B1u , B2u , and B3u normal modes and suggest assignments of the TO phonon modes observed in our ellipsometry spectra by comparing their frequencies and oscillator strengths with those resulting from the present lattice-dynamics study. Based on these assignments, we estimate dynamical effective charges of the atoms in the YTiO3 lattice. We find that in general, the dynamical effective charges in YTiO3 lattice are typical for a family of perovskite oxides. By contrast to a ferroelectric BaTiO3 , the dynamical effective charge of oxygen related to a displacement along the c axis does not show the anomalously large value. At the same time, the dynamical effective charges of Y and ab plane oxygen exhibit anisotropy, indicating a strong hybridization along the a axis.

  5. Ultra-Trace Chemical Sensing with Long-Wave Infrared Cavity-Enhanced Spectroscopic Sensors

    SciTech Connect

    Taubman, Matthew S.; Myers, Tanya L.; Cannon, Bret D.; Williams, Richard M.; Schultz, John F.

    2003-02-20

    The infrared sensors task of Pacific Northwest National Laboratory's (PNNL's) Remote Spectroscopy Project (Task B of Project PL211) is focused on the science and technology of remote and in-situ spectroscopic chemical sensors for detecting proliferation and coun-tering terrorism. Missions to be addressed by remote chemical sensor development in-clude detecting proliferation of nuclear or chemical weapons, and providing warning of terrorist use of chemical weapons. Missions to be addressed by in-situ chemical sensor development include countering terrorism by screening luggage, personnel, and shipping containers for explosives, firearms, narcotics, chemical weapons, or chemical weapons residues, and mapping contaminated areas. The science and technology is also relevant to chemical weapons defense, air operations support, monitoring emissions from chemi-cal weapons destruction or industrial activities, law enforcement, medical diagnostics, and other applications. Sensors for most of these missions will require extreme chemical sensitivity and selectiv-ity because the signature chemicals of importance are expected to be present in low con-centrations or have low vapor pressures, and the ambient air is likely to contain pollutants or other chemicals with interfering spectra. Cavity-enhanced chemical sensors (CES) that draw air samples into optical cavities for laser-based interrogation of their chemical content promise real-time, in-situ chemical detection with extreme sensitivity to specified target molecules and superb immunity to spectral interference and other sources of noise. PNNL is developing CES based on quantum cascade (QC) lasers that operate in the mid-wave infrared (MWIR - 3 to 5 microns) and long-wave infrared (LWIR - 8 to 14 mi-crons), and CES based on telecommunications lasers operating in the short-wave infrared (SWIR - 1 to 2 microns). All three spectral regions are promising because smaller mo-lecular absorption cross sections in the SWIR are offset

  6. Diffuse Reflectance Infrared Spectroscopic Identification of Dispersant/Particle Bonding Mechanisms in Functional Inks

    PubMed Central

    Deiner, L. Jay; Farjami, Elaheh

    2015-01-01

    In additive manufacturing, or 3D printing, material is deposited drop by drop, to create micron to macroscale layers. A typical inkjet ink is a colloidal dispersion containing approximately ten components including solvent, the nano to micron scale particles which will comprise the printed layer, polymeric dispersants to stabilize the particles, and polymers to tune layer strength, surface tension and viscosity. To rationally and efficiently formulate such an ink, it is crucial to know how the components interact. Specifically, which polymers bond to the particle surfaces and how are they attached? Answering this question requires an experimental procedure that discriminates between polymer adsorbed on the particles and free polymer. Further, the method must provide details about how the functional groups of the polymer interact with the particle. In this protocol, we show how to employ centrifugation to separate particles with adsorbed polymer from the rest of the ink, prepare the separated samples for spectroscopic measurement, and use Diffuse Reflectance Fourier Transform Infrared Spectroscopy (DRIFTS) for accurate determination of dispersant/particle bonding mechanisms. A significant advantage of this methodology is that it provides high level mechanistic detail using only simple, commonly available laboratory equipment. This makes crucial data available to almost any formulation laboratory. The method is most useful for inks composed of metal, ceramic, and metal oxide particles in the range of 100 nm or greater. Because of the density and particle size of these inks, they are readily separable with centrifugation. Further, the spectroscopic signatures of such particles are easy to distinguish from absorbed polymer. The primary limitation of this technique is that the spectroscopy is performed ex-situ on the separated and dried particles as opposed to the particles in dispersion. However, results from attenuated total reflectance spectra of the wet separated

  7. Molecular hydraulic properties of montmorillonite: a polarized fourier transform infrared spectroscopic study.

    PubMed

    Amarasinghe, Priyanthi M; Katti, Kalpana S; Katti, Dinesh R

    2008-12-01

    Understanding the rates at which fluid flows into clay interlayers at the molecular level is fundamental to designing an effective clay barrier system. In this work, molecular interactions at the Na-montmorillonite (MMT)-water interface, emphasizing the flow properties of the clay interlayer, have been studied at the molecular and nanoscale level using polarized Fourier transform infrared (FT-IR) spectroscopic and X-ray diffraction (XRD) techniques. Clay-water slurries were smeared on inert gold-coated metal substrates for FT-IR experiments and slurries were smeared on quartz plates for XRD experiments. By analyzing the O-H stretching and H-O-H bending vibrations in clay slurries, it was concluded that the molecular behavior of interlayer water is significantly different from the molecular behavior of bulk water. With increasing clay-water interaction time, it was also seen that the Si-O stretching bands of clay are being significantly altered by the water molecules in the interlayer. Using these spectroscopic techniques we have estimated the time required for water to flow into the clay interlayer. Further, by analyzing the particle size of the clay using atomic force microscopy (AFM) imaging, we were able to estimate the flow velocity of the water in the clay interlayer. This velocity is found to be 3.23 x 10(-9) cm/s. This flow velocity was found to be of the same order of magnitude as the hydraulic conductivity of smectite-type clay reported elsewhere. Also described in this work is the correct positioning of the Si-O out-of-plane vibration band of MMT at the two-layer saturation level in the interlayer. This band was only observed in p-polarized spectra at 1211 cm(-1). Thus, we attribute this band to the Si-O out-of-plane vibration band.

  8. Infrared Spectroscopic Studies of Matrix-Isolated Molecules with Potential Astrophysical Significance

    NASA Astrophysics Data System (ADS)

    Wehlburg, Christine Marie

    1997-08-01

    Many of the molecules purported to exist in interstellar space can only be generated in high temperature processes or are ions that are difficult to produce at high enough concentrations for spectroscopic analysis. The molecules investigated in this study, specifically, were polycyclic aromatic hydrocarbon (PAH) ions, carbon chain water complexes and carbon chain anions. PAHs are the proposed carriers of the unidentified interstellar (UIR) emission. The infrared investigation of pentacene and tetracene ions was pursued to provide data concerning the possibility that PAH cations were the source of the UIR emission. In this study, infrared features corresponding to both cation and anions for both molecules were observed for the first time. The most intense features for the neutral molecules were the CH out-of-plane wagging modes while the most intense cationic and anionic features were in the CC stretch and CH bending regions. The relative intensities from theoretical calculations were in reasonable agreement with experimental values with the exception of an overestimation for the intensities of the CH stretch in both neutral pentacene and tetracene. Carbon chain water complexes are very weakly bound species that are observed when graphite is vaporized at low power. The infrared features increase in intensity and new ones appear after annealing a matrix containing carbon chain molecules and H2O. The current study involved assignment of infrared features at 1959.4 and 2014.4 cm-1 to C6ċ H2O and C9ċ H2O, respectively. Assignments were based on the fact that both bands increased relative to the C9 and C6 bands when the concentration of H2O increased. The band assignments were further justified by a 12,13C study for C6/cdotH2O and the agreement of the theoretical shift, relative to the asymmetric stretch band of C9, for C9ċ H2O. In addition a new feature at 1550.4 cm-1 was tentatively assigned to C4ċ H2O. Finally, an isotopic study of a feature at 1721.8 cm-1

  9. High-dispersion infrared spectroscopic observations of comet 8P/Tuttle with VLT/CRIRES

    NASA Astrophysics Data System (ADS)

    Kobayashi, H.; Bockelée-Morvan, D.; Kawakita, H.; Dello Russo, N.; Jehin, E.; Manfroid, J.; Smette, A.; Hutsemékers, D.; Stüwe, J.; Weiler, M.; Arpigny, C.; Biver, N.; Cochran, A.; Crovisier, J.; Magain, P.; Sana, H.; Schulz, R.; Vervack, R. J.; Weaver, H.; Zucconi, J.-M.

    2010-01-01

    We report on the composition of the Halley-family comet (HFC) 8P/Tuttle investigated with high-dispersion near-infrared spectroscopic observations. The observations were carried out at the ESO VLT (Very Large Telescope) with the CRIRES instrument as part of a multi-wavelength observation campaign of 8P/Tuttle performed in late January and early February 2008. Radar observations suggested that 8P/Tuttle is a contact binary, and it was proposed that these components might be heterogeneous in chemistry. We determined mixing ratios of organic volatiles with respect to H2O and found that mixing ratios were consistent with previous near infrared spectroscopic observations obtained in late December 2007 and in late January 2008. It has been suggested that because 8P/Tuttle is a contact binary, it might be chemically heterogeneous. However, we find no evidence for chemical heterogeneity within the nucleus of 8P/Tuttle. We also compared the mixing ratios of organic molecules in 8P/Tuttle with those of both other HFCs and long period comets (LPCs) and found that HCN, C2H2, and C2H6 are depleted whereas CH4 and CH3OH have normal abundances. This may indicate that 8P/Tuttle was formed in a different region of the early solar nebula than other HFCs and LPCs. We estimated the conversion efficiency from C2H2 to C2H6 by hydrogen addition reactions on cold grains by employing the C2H6/(C2H6+C2H2) ratio. The C2H6/(C2H6+C2H2) ratio in 8P/Tuttle is consistent with the ratios found in other HFCs and LPCs within the error bars. We also discuss the source of C2 and CN based on our observations and conclude that the abundances of C2H2 and C2H6 are insufficient to explain the C2 abundances in comet 8P/Tuttle and that the abundance of HCN is insufficient to explain the CN abundances in the comet, so at least one additional parent is needed for each species, as pointed out in previous study. Based on observations collected at the European Southern Observatory, Paranal, Chile (ESO Prog. 080.C

  10. Spectroscopic [C I] mapping of the infrared dark cloud G48.65-0.29

    NASA Astrophysics Data System (ADS)

    Ossenkopf, V.; Ormel, C. W.; Simon, R.; Sun, K.; Stutzki, J.

    2011-01-01

    Aims: We report the first spectroscopic mapping of an atomic carbon line in an infrared dark cloud (IRDC). By observing the spatial distribution of the [C i] emission in an IRDC, comparing it with the 13CO emission and the known distribution of internal heating sources, we can quantify the role of internal and external UV irradiation in the production of atomic carbon. Methods: We used the 2 × 4 pixel SMART receiver of the KOSMA observatory on Gornergrat to map the [C i] 3P1 - 3P0 line in the IRDC G48.65-0.29 and compared the resulting spectra with data from the BU-FCRAO 13CO 1-0 Galactic Ring Survey. Results: The [C i]/13CO effective beam temperature ratio falls at about 0.3 with local deviations by less than a factor two. All velocity components seen in 13CO are also detected in [C i]. We find, however, significant differences in the morphology of the brightest regions seen in the two tracers. While 13CO basically follows the column density distribution derived from the near-infrared (NIR) extinction and the submm continuum, the [C i] emission peaks at the locations of the two known NIR point sources. We find C i/CO abundance ratios between 0.07 and 0.13 matching the lower end of the range previously measured in star-forming regions. Conclusions: Evaluating the relative importance of the irradiation by embedded sources and by the Galactic interstellar UV field, we find that in G48.65-0.29 most [C i] emission can be attributed to externally illuminated surfaces. Embedded sources have a significant impact on the overall abundance distribution of atomic carbon as soon as they are found in an evolved state with noticeable NIR flux.

  11. A Theoretical Investigation of the Infrared Spectroscopic Properties of Closed-Shell Polycyclic Aromatic Hydrocarbon Cations

    NASA Technical Reports Server (NTRS)

    Hudgins, Douglas M.; Bauschlicher, Charles W., Jr.; Allamandola, Louis J.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Density functional theory has been employed to calculate the harmonic frequencies and intensities of a range of PAH cations which explore both size and electronic structure effects on the infrared spectroscopic of these species. The sample extends the size range of PAH species considered to more than 50 carbon atoms and includes several representatives from each of two heretofore unexplored categories of PAH cations: (1) fully benzenoid PAH cations whose carbon skeleton is composed of an odd number of carbon atoms and (2) protonated PAH cations. Unlike the radical electronic structures of the PAH cations that have been the subject of previous theoretical and experimental work, the species in these two classes have a closed-shell electronic configuration. The calculated spectra of circumcoronene, C54H18, in both neutral and (radical) cationic form are also reported and compared to those of the other species. Closed-shell species are inherently less reactive than radical (or open-shell) cations and are known to play a role in combustion chemistry. Since interstellar PAHs are typically exposed to abundant atomic hydrogen and are thought to originate under pseudo-combustion conditions in carbon-rich circumstellar shells, such species may represent an important component of the interstellar PAH population. Furthermore, species larger than 50 carbon atoms are more representative of the size of the typical interstellar PAH. Overall, as has been the case for previous studies of PAH radical cations, the general pattern of band positions and intensities are consistent with that of the interstellar infrared emission spectrum. In addition, the spectra of closed-shell and open-shell cations are found to converge with increasing molecular size and are found to be relatively similar for species containing about 50 carbon atoms.

  12. A Theoretical Investigation of the Infrared Spectroscopic Properties of Closed-Shell Polycyclic Aromatic Hydrocarbon Cations

    NASA Technical Reports Server (NTRS)

    Hudgins, Douglas M.; Bauschlicher, Charles W., Jr.; Allamandola, Louis J.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Density functional theory has been employed to calculate the harmonic frequencies and intensities of a range of PAH cations which explore both size and electronic structure effects on the infrared spectroscopic of these species. The sample extends the size range of PAH species considered to more than 50 carbon atoms and includes several representatives from each of two heretofore unexplored categories of PAH cations: (1) fully benzenoid PAH cations whose carbon skeleton is composed of an odd number of carbon atoms and (2) protonated PAH cations. Unlike the radical electronic structures of the PAH cations that have been the subject of previous theoretical and experimental work, the species in these two classes have a closed-shell electronic configuration. The calculated spectra of circumcoronene, C54H18, in both neutral and (radical) cationic form are also reported and compared to those of the other species. Closed-shell species are inherently less reactive than radical (or open-shell) cations and are known to play a role in combustion chemistry. Since interstellar PAHs are typically exposed to abundant atomic hydrogen and are thought to originate under pseudo-combustion conditions in carbon-rich circumstellar shells, such species may represent an important component of the interstellar PAH population. Furthermore, species larger than 50 carbon atoms are more representative of the size of the typical interstellar PAH. Overall, as has been the case for previous studies of PAH radical cations, the general pattern of band positions and intensities are consistent with that of the interstellar infrared emission spectrum. In addition, the spectra of closed-shell and open-shell cations are found to converge with increasing molecular size and are found to be relatively similar for species containing about 50 carbon atoms.

  13. Progress Towards a High-Precision Infrared Spectroscopic Survey of the H_3^+ Ion

    NASA Astrophysics Data System (ADS)

    Perry, Adam J.; Hodges, James N.; Markus, Charles R.; Kocheril, G. Stephen; Jenkins, Paul A., II; McCall, Benjamin J.

    2015-06-01

    The trihydrogen cation, H_3^+, represents one of the most important and fundamental molecular systems. Having only two electrons and three nuclei, H_3^+ is the simplest polyatomic system and is a key testing ground for the development of new techniques for calculating potential energy surfaces and predicting molecular spectra. Corrections that go beyond the Born-Oppenheimer approximation, including adiabatic, non-adiabatic, relativistic, and quantum electrodynamic corrections are becoming more feasible to calculate. As a result, experimental measurements performed on the H_3^+ ion serve as important benchmarks which are used to test the predictive power of new computational methods. By measuring many infrared transitions with precision at the sub-MHz level it is possible to construct a list of the most highly precise experimental rovibrational energy levels for this molecule. Until recently, only a select handful of infrared transitions of this molecule have been measured with high precision (˜ 1 MHz). Using the technique of Noise Immune Cavity Enhanced Optical Heterodyne Velocity Modulation Spectroscopy, we are aiming to produce the largest high-precision spectroscopic dataset for this molecule to date. Presented here are the current results from our survey along with a discussion of the combination differences analysis used to extract the experimentally determined rovibrational energy levels. O. Polyansky, et al., Phil. Trans. R. Soc. A (2012), 370, 5014. M. Pavanello, et al., J. Chem. Phys. (2012), 136, 184303. L. Diniz, et al., Phys. Rev. A (2013), 88, 032506. L. Lodi, et al., Phys. Rev. A (2014), 89, 032505. J. Hodges, et al., J. Chem. Phys (2013), 139, 164201.

  14. Low-resolution near-infrared spectroscopic signatures of unresolved ultracool companions to M dwarfs

    NASA Astrophysics Data System (ADS)

    Cook, N. J.; Pinfield, D. J.; Marocco, F.; Burningham, B.; Jones, H. R. A.; Frith, J.; Zhong, J.; Luo, A. L.; Qi, Z. X.; Cowan, N. B.; Gromadzki, M.; Kurtev, R. G.; Guo, Y. X.; Wang, Y. F.; Song, Y. H.; Yi, Z. P.; Smart, R. L.

    2017-06-01

    We develop a method to identify the spectroscopic signature of unresolved L-dwarf ultracool companions, which compares the spectra of candidates and their associated control stars using spectral ratio differences and residual spectra. We present SpeX prism-mode spectra (0.7-2.5 μm) for a pilot sample of 111 mid-M dwarfs, including 28 that were previously identified as candidates for unresolved ultracool companionship and 83 single M dwarfs that were optically colour similar to these candidates (which we use as 'control stars'). We identify four candidates with evidence for near-infrared excess. One of these (WISE J100202.50+074136.3) shows strong evidence for an unresolved L dwarf companion in both its spectral ratio difference and its residual spectra, two most likely have a different source for the near-infrared excess, and the other may be due to spectral noise. We also establish expectations for a null result (i.e. by searching for companionship signatures around the M dwarf control stars), as well as determining the expected outcome for ubiquitous companionship (as a means of comparison with our actual results), using artificially generated unresolved M+L dwarf spectra. The results of these analyses are compared to those for the candidate sample, and reasonable consistency is found. With a full follow-up programme of our candidates sample from Cook et al., we might expect to confirm up to 40 such companions in the future, adding extensively to the known desert population of M3-M5 dwarfs.

  15. AKARI NEAR-INFRARED SPECTROSCOPIC SURVEY FOR CO{sub 2} IN 18 COMETS

    SciTech Connect

    Ootsubo, Takafumi; Kawakita, Hideyo; Hamada, Saki; Kobayashi, Hitomi; Yamaguchi, Mitsuru; Usui, Fumihiko; Nakagawa, Takao; Ueno, Munetaka; Ishiguro, Masateru; Sekiguchi, Tomohiko; Watanabe, Jun-ichi; Sakon, Itsuki; Shimonishi, Takashi; Onaka, Takashi

    2012-06-10

    We conducted a spectroscopic survey of cometary volatiles with the Infrared Camera on board the Japanese infrared satellite AKARI in the wavelength range from 2.5 to 5 {mu}m. In our survey, 18 comets, including both the Oort cloud comets and the Jupiter-family comets, were observed in the period from 2008 June to 2010 January, most of which were observed at least twice. The prominent emission bands in the observed spectra are the fundamental vibrational bands of water (H{sub 2}O) at 2.7 {mu}m and carbon dioxide (CO{sub 2}) at 4.3 {mu}m. The fundamental vibrational band of carbon monoxide (CO) around 4.7 {mu}m and the broad emission feature, probably related to carbon-hydrogen-bearing molecules, can also be recognized around the 3.3-3.5-{mu}m region in some of the comets. With respect to H{sub 2}O, gas production rate ratios of CO{sub 2} have been derived in 17 comets, except for the comet 29P/Schwassmann-Wachmann 1. Our data set provides the largest homogeneous database of CO{sub 2}/H{sub 2}O production rate ratios in comets obtained so far. The CO{sub 2}/H{sub 2}O production rate ratios are considered to reflect the composition of cometary ice when a comet is observed at a heliocentric distance within {approx}2.5 AU, since H{sub 2}O ice fully sublimates there. The CO{sub 2}/H{sub 2}O ratio in cometary ice spans from several to {approx}30% among the comets observed at <2.5 AU (13 out of the 17 comets). Alternatively, the ratio of CO/CO{sub 2} in the comets seems to be smaller than unity based on our observations, although we only obtain upper limits for CO in most of the comets.

  16. Covalent and Noncovalent Interactions Between Boron and Argon: AN Infrared Photodissociation Spectroscopic Study of Argon-Boron Oxide Cation Complexes

    NASA Astrophysics Data System (ADS)

    Jin, Jiaye; Li, Wei; Wang, Guanjun; Zhou, Mingfei

    2017-06-01

    Although a wide range of compounds of the heavy rare-gas elements are experimentally known, very few chemically bound molecules have been experimentally observed for the lighter noble gases. Here we report a combined infrared photodissociation spectroscopic and theoretical study on a series of argon-boron oxide cation complexes prepared via a laser vaporization supersonic ion source in the gas phase. Infrared spectroscopic combined with state-of-the-art quantum chemical calculations indicate that the [ArB_3O_{4,5}]^+, [ArB_4O_{5-7}]^+ and [ArB_5O_7]^+ cation complexes have planar structures each involving an aromatic boroxol ring and an argon-boron covalent bond formed between the in-plane 2p atomic orbitals of Ar and boron. In contrast, the [ArB_3O_4]^+ cation complex is characterized to be a weakly bound complex with a BO chain structure.

  17. Infrared spectroscopic measurements of halogenated source gases in the stratosphere with the ATMOS instrument

    NASA Technical Reports Server (NTRS)

    Zander, R.; Rinsland, C. P.; Farmer, C. B.; Norton, R. H.

    1987-01-01

    The volume mixing ratios of the six most important halogenated source species (CH3Cl, CF2Cl2, CFCl3, CHF2Cl, CCl4, and CF4) have been retrieved over the 10- to 30-km altitude range from the analysis of 0.01/cm resolution infrared solar occultation spectra recorded near 30 deg N and 47 deg S latitudes with the ATMOS (Atmospheric Trace Molecule Spectroscopy) instrument, operating from on board Spacelab 3 (April-May 1985). The results reported here, although in satisfactory agreement with recent in situ values obtained from air sampling techniques, are limited in accuracy by the limited absorption representative of most of the species and by uncertainties in the spectroscopic parameters currently available for these gases. They demonstrate, however, the power of the IR remote sensing approach for evaluating on a global scale the total chlorine budget of the atmosphere, and they provide an independent set of simultaneous data acquired for the important source and reservoir halogenated molecular species in the upper atmosphere.

  18. Near infrared photometric and optical spectroscopic study of 22 low mass star clusters embedded in nebulae

    NASA Astrophysics Data System (ADS)

    Soares, J. B.; Bica, E.; Ahumada, A. V.; Clariá, J. J.

    2008-02-01

    Aims:Among the star clusters in the Galaxy, those embedded in nebulae represent the youngest group, which has only recently been explored. The analysis of a sample of 22 candidate embedded stellar systems in reflection nebulae and/or HII environments is presented. Methods: We employed optical spectroscopic observations of stars in the directions of the clusters carried out at CASLEO (Argentina) together with near infrared photometry from the 2MASS catalogue. Our analysis is based on source surface density, colour-colour diagrams and on theoretical pre-main sequence isochrones. We take into account the field star contamination by carrying out a statistical subtraction. Results: The studied objects have the characteristics of low mass systems. We derive their fundamental parameters. Most of the cluster ages are younger than 2 Myr. The studied embedded stellar systems in reflection nebulae and/or HII region complexes do not have stars of spectral types earlier than B. The total stellar masses locked in the clusters are in the range 20-220 M⊙. They are found to be gravitationally unstable and are expected to dissolve in a timescale of a few Myr. Based on observations made at Complejo Astronómico El Leoncito, which is operated under agreement between the Consejo Nacional de Investigaciones Científicas y Técnicas de la República Argentina and the National Universities of La Plata, Córdoba and San Juan, Argentina.

  19. Instrument for near infrared emission spectroscopic probing of human fingertips in vivo.

    PubMed

    Chaiken, J; Deng, Bin; Bussjager, Rebecca J; Shaheen, George; Rice, David; Stehlik, Dave; Fayos, John

    2010-03-01

    We present instrumentation for probing of volar side fingertip capillary beds with free space coupled near infrared light while collecting Raman, Rayleigh, and Mie scattered light as well as fluorescence. Fingertip skin capillary beds are highly vascularized relative to other tissues and present a desirable target for noninvasive probing of blood. But human hands and fingers in particular are also highly idiosyncratic body parts requiring specific apparatus to allow careful and methodical spectroscopic probing. The apparatus includes means for precise and reproducible placement of the tissues relative to the optical aperture. Appropriate means are provided for applying and maintaining pressure to keep surface tissues immobile during experiments while obtaining the desired blood content and flow. Soft matter, e.g., skin, extrudes into the aperture in response to any applied pressure, e.g., to keep the tissue in registration with the optical system, so the position, contact area, pressure, and force are continuously measured and recorded to produce feedback for an actuator applying force and to discern the compliance of the test subject. The compliance strongly affects the reliability of the measurement and human factors must be adequately managed in the case of in vivo probing. The apparatus produces reproducible observations and measurements that allow consistent probing of the tissues of a wide range of skin types.

  20. On the importance of image formation optics in the design of infrared spectroscopic imaging systems

    PubMed Central

    Mayerich, David; van Dijk, Thomas; Walsh, Michael; Schulmerich, Matthew; Carney, P. Scott

    2014-01-01

    Infrared spectroscopic imaging provides micron-scale spatial resolution with molecular contrast. While recent work demonstrates that sample morphology affects the recorded spectrum, considerably less attention has been focused on the effects of the optics, including the condenser and objective. This analysis is extremely important, since it will be possible to understand effects on recorded data and provides insight for reducing optical effects through rigorous microscope design. Here, we present a theoretical description and experimental results that demonstrate the effects of commonly-employed cassegranian optics on recorded spectra. We first combine an explicit model of image formation and a method for quantifying and visualizing the deviations in recorded spectra as a function of microscope optics. We then verify these simulations with measurements obtained from spatially heterogeneous samples. The deviation of the computed spectrum from the ideal case is quantified via a map which we call a deviation map. The deviation map is obtained as a function of optical elements by systematic simulations. Examination of deviation maps demonstrates that the optimal optical configuration for minimal deviation is contrary to prevailing practice in which throughput is maximized for an instrument without a sample. This report should be helpful for understanding recorded spectra as a function of the optics, the analytical limits of recorded data determined by the optical design, and potential routes for optimization of imaging systems. PMID:24936526

  1. Real-time near-infrared spectroscopic inspection system for adulterated sesame oil

    NASA Astrophysics Data System (ADS)

    Kang, Sukwon; Lee, Kang-jin; Son, Jaeryong; Kim, Moon S.

    2010-04-01

    Sesame seed oil is popular and expensive in Korea and has been often mixed with other less expensive vegetable oils. The objective of this research is to develop an economical and rapid adulteration determination system for sesame seed oil mixed with other vegetable oils. A recently developed inspection system consists of a light source, a measuring unit, a spectrophotometer, fiber optics, and a data acquisition module. A near-infrared transmittance spectroscopic method was used to develop the prediction model using Partial Least Square (PLS). Sesame seed oil mixed with a range of concentrations of corn, or perilla, or soybean oil was measured in 8 mm diameter glass tubes. For the model development, a correlation coefficient value of 0.98 was observed for corn, perilla, and soybean oil mixtures with standard errors of correlation of 6.32%, 6.16%, and 5.67%, respectively. From the prediction model, the correlation coefficients of corn oil, perilla oil, and soybean oil were 0.98, 0.97 and 0.98, respectively. The Standard Error of Prediction (SEP) for corn oil, perilla oil, and soybean oil were 6.52%, 6.89% and 5.88%, respectively. The results indicated that this system can potentially be used as a rapid non-destructive adulteration analysis tool for sesame seed oil mixed with other vegetable oils.

  2. Early detection of ozone-induced hydroperoxides in epithelial cells by a novel infrared spectroscopic method.

    PubMed

    Hemmingsen, A; Allen, J T; Zhang, S; Mortensen, J; Spiteri, M A

    1999-11-01

    In the lower atmosphere ozone is a toxic and an unwanted oxidising pollutant causing injury to the airway epithelial cells by lipid peroxidation to yield products such as phospholipid hydroperoxides (PLHP). Measurements of PLHP, which are primary oxidation products, may reflect an early susceptibility of the target cell to oxidative stress. Biphasic cultures of bronchial epithelial cells (BEAS-2B) were exposed to ozone at environmentally relevant concentrations (0.1-1.0 ppm) for 4 and 12 h. Detection of PLHP was made using a novel technique based on fourier transform infrared spectroscopy (FTIR) in combination with high performance thin-layer chromatography (HPTLC). Six phospholipids were identified on the HPTLC plate; lysophosphatidylcholine (LPC), sphingomyelin (SM), phosphatidylcholine (PC), lysophosphatidylethanolamine (LPE), phosphatidylinositol (PI), and phosphatidylethanolamine (PE). From the FTIR spectra, O-O stretching of hydroperoxides was identified in the range 890-820cm(-1). Multivariate data analysis revealed a positive correlation (r = 0.99 for 4 h exposure and r = 0.98 for 12h exposure) between ozone exposure levels and the region of the FTIR-spectrum comprising the main wavelengths for hydroperoxides. These data support this alternative, versatile and novel spectroscopic approach for the early detection of ozone-mediated damage in human airway epithelial cells.

  3. Infrared spectroscopic studies of sodium dodecyl sulphate permeation and interaction with stratum corneum lipids in skin.

    PubMed

    Saad, P; Flach, C R; Walters, R M; Mendelsohn, R

    2012-02-01

    The barrier function of skin is primarily provided by the lamellar lipid matrix of the stratum corneum (SC), which has been shown in previous infrared (IR) and related studies to consist predominantly of ordered lipids packed in orthorhombic and hexagonal domains. In the current work, we investigate the effects of the anionic surfactant, sodium dodecyl sulphate (SDS), on SC lipid packing and phase behaviour, using FT-IR spectroscopy. The use of acyl chain perdeuterated SDS allows unequivocal spectroscopic detection of both endogenous lipid and exogenous material in intact tissue. IR spectra were acquired as a function of temperature from isolated human SC exposed to SDS for various incubation periods at 34°C. SDS is found to enter the SC and is observed to be in a more ordered state in the SC than in solution, indicating that the SDS interacts with the ordered SC lipids. The results reveal that SDS reduces the amount of orthorhombic phase in the SC and increases the amount of hexagonally packed lipid at physiologically relevant temperatures. In addition, a small decrease in the lipid T(m) (acyl chain melting temperature) is observed. Furthermore, these SDS-induced changes were found to be strongly dependent on the time of exposure. © 2011 The Authors. ICS © 2011 Society of Cosmetic Scientists and the Société Française de Cosmétologie.

  4. Spectroscopic analysis of bladder cancer tissues using Fourier transform infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Al-Muslet, Nafie A.; Ali, Essam E.

    2012-03-01

    Bladder cancer is one of the most common cancers in Africa. It takes several days to reach a diagnosis using histological examinations of specimens obtained by endoscope, which increases the medical expense. Recently, spectroscopic analysis of bladder cancer tissues has received considerable attention as a diagnosis technique due to its sensitivity to biochemical variations in the samples. This study investigated the use of Fourier transform infrared (FTIR) spectroscopy to analyze a number of bladder cancer tissues. Twenty-two samples were collected from 11 patients diagnosed with bladder cancer from different hospitals without any pretreatment. From each patient two samples were collected, one normal and another cancerous. FTIR spectrometer was used to differentiate between normal and cancerous bladder tissues via changes in spectra of these samples. The investigations detected obvious changes in the bands of proteins (1650, 1550 cm-1), lipids (2925, 2850 cm-1), and nucleic acid (1080, 1236 cm-1). The results show that FTIR spectroscopy is promising as a rapid, accurate, nondestructive, and easy to use alternative method for identification and diagnosis of bladder cancer tissues.

  5. On the importance of image formation optics in the design of infrared spectroscopic imaging systems.

    PubMed

    Mayerich, David; van Dijk, Thomas; Walsh, Michael J; Schulmerich, Matthew V; Carney, P Scott; Bhargava, Rohit

    2014-08-21

    Infrared spectroscopic imaging provides micron-scale spatial resolution with molecular contrast. While recent work demonstrates that sample morphology affects the recorded spectrum, considerably less attention has been focused on the effects of the optics, including the condenser and objective. This analysis is extremely important, since it will be possible to understand effects on recorded data and provides insight for reducing optical effects through rigorous microscope design. Here, we present a theoretical description and experimental results that demonstrate the effects of commonly-employed cassegranian optics on recorded spectra. We first combine an explicit model of image formation and a method for quantifying and visualizing the deviations in recorded spectra as a function of microscope optics. We then verify these simulations with measurements obtained from spatially heterogeneous samples. The deviation of the computed spectrum from the ideal case is quantified via a map which we call a deviation map. The deviation map is obtained as a function of optical elements by systematic simulations. Examination of deviation maps demonstrates that the optimal optical configuration for minimal deviation is contrary to prevailing practice in which throughput is maximized for an instrument without a sample. This report should be helpful for understanding recorded spectra as a function of the optics, the analytical limits of recorded data determined by the optical design, and potential routes for optimization of imaging systems.

  6. Fourier Transform Infrared Spectroscopic Imaging and Multivariate Regression for Prediction of Proteoglycan Content of Articular Cartilage

    PubMed Central

    Rieppo, Lassi; Rieppo, Jarno; Jurvelin, Jukka S.; Saarakkala, Simo

    2012-01-01

    Fourier Transform Infrared (FT-IR) spectroscopic imaging has been earlier applied for the spatial estimation of the collagen and the proteoglycan (PG) contents of articular cartilage (AC). However, earlier studies have been limited to the use of univariate analysis techniques. Current analysis methods lack the needed specificity for collagen and PGs. The aim of the present study was to evaluate the suitability of partial least squares regression (PLSR) and principal component regression (PCR) methods for the analysis of the PG content of AC. Multivariate regression models were compared with earlier used univariate methods and tested with a sample material consisting of healthy and enzymatically degraded steer AC. Chondroitinase ABC enzyme was used to increase the variation in PG content levels as compared to intact AC. Digital densitometric measurements of Safranin O –stained sections provided the reference for PG content. The results showed that multivariate regression models predict PG content of AC significantly better than earlier used absorbance spectrum (i.e. the area of carbohydrate region with or without amide I normalization) or second derivative spectrum univariate parameters. Increased molecular specificity favours the use of multivariate regression models, but they require more knowledge of chemometric analysis and extended laboratory resources for gathering reference data for establishing the models. When true molecular specificity is required, the multivariate models should be used. PMID:22359683

  7. Infrared Spectroscopic Study For Structural Investigation Of Lithium Lead Silicate Glasses

    SciTech Connect

    Ahlawat, Navneet; Aghamkar, Praveen; Ahlawat, Neetu; Agarwal, Ashish; Monica

    2011-12-12

    Lithium lead silicate glasses with composition 30Li{sub 2}O{center_dot}(70-x)PbO{center_dot}xSiO{sub 2}(where, x = 10, 20, 30, 40, 50 mol %)(LPS glasses) were prepared by normal melt quench technique at 1373 K for half an hour in air to understand their structure. Compositional dependence of density, molar volume and glass transition temperature of these glasses indicates more compactness of the glass structure with increasing SiO{sub 2} content. Fourier transform infrared (FTIR) spectroscopic data obtained for these glasses was used to investigate the changes induced in the local structure of samples as the ratio between PbO and SiO{sub 2} content changes from 6.0 to 0.4. The observed absorption band around 450-510 cm{sup -1} in IR spectra of these glasses indicates the presence of network forming PbO{sub 4} tetrahedral units in glass structure. The increase in intensity with increasing SiO{sub 2} content (upto x = 30 mol %) suggests superposition of Pb-O and Si-O bond vibrations in absorption band around 450-510 cm{sup -1}. The values of optical basicity in these glasses were found to be dependent directly on PbO/SiO{sub 2} ratio.

  8. Multi-steps infrared spectroscopic characterization of the effect of flowering on medicinal value of Cistanche tubulosa

    NASA Astrophysics Data System (ADS)

    Lai, Zuliang; Xu, Peng; Wu, Peiyi

    2009-01-01

    Multi-steps infrared spectroscopic methods, including conventional Fourier transform infrared spectroscopy (FT-IR), second derivative spectroscopy and two-dimensional infrared (2D-IR) correlation spectroscopy, have been proved to be effective methods to examine complicated mixture system such as Chinese herbal medicine. The focus of this paper is the investigation on the effect of flowering on the pharmaceutical components of Cistanche tubulosa by using the Multi-steps infrared spectroscopic method. Power-spectrum analysis is applied to improve the resolution of 2D-IR contour maps and much more details of overlapped peaks are detected. According to the results of FT-IR and second derivative spectra, the peak at 1732 cm -1 assigned to C dbnd O is stronger before flowering than that after flowering in the stem, while more C dbnd O groups are found in the top after flowering. The spectra of root change a lot in the process of flowering for the reason that many peaks shift and disappear after flowering. Seven peaks in the spectra of stem, which are assigned to different kinds of glycoside components, are distinguished by Power-spectra in the range of 900-1200 cm -1. The results provide a scientific explanation to the traditional experience that flowering consumes the pharmaceutical components in stem and the seeds absorb some nutrients of stem after flowering. In conclusion, the Multi-steps infrared spectroscopic method combined with Power-spectra is a promising method to investigate the flowering process of C. tubulosa and discriminate various parts of the herbal medicine.

  9. Novel infrared spectroscopic techniques for the study of adsorbed proteins on photoactive thin films

    NASA Astrophysics Data System (ADS)

    Angle, Taylor Allan

    Through the development of attenuated total reflection (ATR) Fourier transform infrared (FTIR) spectroscopic techniques, as well as biocompatible nanoporous gold film confining layers and photoactive nanocrystal cadmium telluride (CdTe) thin films, a system capable of in situ study of adsorbed protein films on photoactive layers was created. Due to the oxygen intolerance of the enzyme of interest for this work (a [FeFe]-hydrogenase from Clostridium acetobutylicum), techniques were developed in a manner conducive to anaerobic environments. Solid-state ligand exchange processes were shown to have no detrimental effect on the continued ability of nanocrystal CdTe layers to reduce species via the transfer of photogenerated electrons. Nanoporous gold films were shown to effectively confine poorly bound surface species including nanocrystal CdTe layers and adsorbed protein films. An ATR "stack'' structure, consisting of a silicon wafer coupled to a zinc selenide ATR crystal by a high index optical coupling fluid, was designed and implemented, leading to a tunable optical structure for use with existing ATR setups. This ATR stack was shown to maintain resolution and signal intensity of traditional ATR configurations for both aqueous and solid-state samples. Through the use of coupled silicon wafers, we significantly increased both sample throughput and the number of available chemical processes by replacing the expensive ATR crystals as the default sample substrate. Shown herein to function as initially intended, these novel methods provide the groundwork for more complex experiments, such as an in situ monitoring of the photooxidation of surface-bound hydrogenases.

  10. Spectroscopic Line Parameters in the Infrared Bands of CH3CN and C2H6

    NASA Astrophysics Data System (ADS)

    Devi, V. Malathy

    2010-10-01

    In this paper, measurements of critical spectroscopic line parameters such as positions, absolute intensities and pressure broadened (self- and N2) half-width coefficients for transitions in the ν4 band of CH3CN (acetonitile, ethanenitrile, methyl cyanide) and the ν9 band of C2H6 (ethane) are presented. CH3CN has been measured by remote sensing in the earth's atmosphere, in comets and in interstellar molecular clouds. It is also a constituent in the atmospheres of Titan, Saturn's largest moon. Likewise, C2H6 is also an important constituent in the atmosphere of earth, the giant planets and comets. The 12- μm(˜720-850 cm-1) emission features of this molecule have been observed in spectra from outer solar system bodies of Jupiter, Saturn, Neptune and Titan. Because of their importance in remote sensing measurements, we recently recorded and analyzed a large number of laboratory infrared absorption spectra of pure and N2-broadened spectra of both these molecular bands. Spectra used in these analyses were recorded using either the Bruker IFS 125HR or the Bruker IFS 120HR FTS located at the Pacific Northwest National Laboratory (PNNL), in Richland Washington. To retrieve the various spectral line parameters, a multispectrum nonlinear least squares fitting algorithm was employed and all spectra belonging to each band were fitted simultaneously. Using this fitting technique, the same spectral regions from multiple spectra were fit all at once to maximize the accuracy of the retrieved parameters. The results obtained from present analyses are briefly discussed. In the case of C2H6 both room- and low temperature (˜210-296 K) spectra were recorded, but results from analyzing only room-temperature spectra will be discussed in this work.

  11. Infrared spectroscopic study of stratum corneum model membranes prepared from human ceramides, cholesterol, and fatty acids.

    PubMed

    Gooris, G S; Bouwstra, J A

    2007-04-15

    The outermost layer of the skin, the stratum corneum, consists of corneocytes surrounded by lipid domains. The main lipid classes in stratum corneum are cholesterol, ceramides (CER), and free fatty acids forming two crystalline lamellar phases. However, only limited information is available on whether the various lipid classes participate in the same crystalline lattices or if separate domains are formed within the lipid lamellae. In this article infrared spectroscopic studies are reported of hydrated mixtures prepared from cholesterol, human CER, and free fatty acids. Evaluation of the methylene stretching vibrations revealed a conformational disordering starting at approximately 60 degrees C for all mixtures. Examination of the rotational ordering (scissoring and rocking vibrations) of mixtures prepared from equimolar cholesterol and CER with a variation in the level of free fatty acids showed that at lower free fatty acid content orthorhombic and hexagonal domains coexist in the lipid lamellae. Increasing the fatty acid level to an equimolar cholesterol/CER/fatty acid mixture reveals the dominant presence of an orthorhombic lattice, confirming x-ray diffraction studies. Replacing the protonated free fatty acid chains by their perdeuterated counterparts demonstrates that free fatty acids and CER participate in the same orthorhombic lattice up to a level of slightly less than 1:1:0.75 cholesterol/CER/free fatty acids molar ratio but that free fatty acids also form separate domains within the lipid lamellae at equimolar ratios at room temperature. However, no evidence for this has been observed at 32 degrees C. Extrapolating these findings to the situation in stratum corneum led us conclude that in stratum corneum, fatty acids and CER participate in the orthorhombic lattice at 32 degrees C, the skin temperature.

  12. Infrared Spectroscopic Study of Stratum Corneum Model Membranes Prepared from Human Ceramides, Cholesterol, and Fatty Acids

    PubMed Central

    Gooris, G. S.; Bouwstra, J. A.

    2007-01-01

    The outermost layer of the skin, the stratum corneum, consists of corneocytes surrounded by lipid domains. The main lipid classes in stratum corneum are cholesterol, ceramides (CER), and free fatty acids forming two crystalline lamellar phases. However, only limited information is available on whether the various lipid classes participate in the same crystalline lattices or if separate domains are formed within the lipid lamellae. In this article infrared spectroscopic studies are reported of hydrated mixtures prepared from cholesterol, human CER, and free fatty acids. Evaluation of the methylene stretching vibrations revealed a conformational disordering starting at ∼60°C for all mixtures. Examination of the rotational ordering (scissoring and rocking vibrations) of mixtures prepared from equimolar cholesterol and CER with a variation in the level of free fatty acids showed that at lower free fatty acid content orthorhombic and hexagonal domains coexist in the lipid lamellae. Increasing the fatty acid level to an equimolar cholesterol/CER/fatty acid mixture reveals the dominant presence of an orthorhombic lattice, confirming x-ray diffraction studies. Replacing the protonated free fatty acid chains by their perdeuterated counterparts demonstrates that free fatty acids and CER participate in the same orthorhombic lattice up to a level of slightly less than 1:1:0.75 cholesterol/CER/free fatty acids molar ratio but that free fatty acids also form separate domains within the lipid lamellae at equimolar ratios at room temperature. However, no evidence for this has been observed at 32°C. Extrapolating these findings to the situation in stratum corneum led us conclude that in stratum corneum, fatty acids and CER participate in the orthorhombic lattice at 32°C, the skin temperature. PMID:17277189

  13. Near-infrared spectroscopic studies of self-forming lipids and nanovesicles

    NASA Astrophysics Data System (ADS)

    Bista, Rajan K.; Bruch, Reinhard F.

    2009-02-01

    Lipids and liposomes have remained an active research topic for several decades due to their significance as membrane model. Several vibrational spectroscopic techniques have been developed and employed to study the properties of lipids and liposomes. In this study, near-infrared (NIR) spectroscopy has been used to analyze a suite of synthesized PEGylated lipids trademarked as QuSomesTM. The three amphiphiles used in this study, differ in their apolar hydrophobic chain length and contain various units of polar polyethylene glycol (PEG) head groups. In contrast to conventional phospholipids, this new kind of lipids forms liposomes spontaneously upon hydration, without the supply of external activation energy. Whilst the NIR spectra of QuSomesTM show a common pattern, differences in the spectra are observed which enable the lipids to be distinguished. NIR absorption spectra of these new artificial lipids have been recorded in the spectral range of 4800-9000 cm-1 (~2100-1100 nm) by using a new miniaturized spectrometer based on micro-optical-electro-mechanical systems (MOEMS) technology. In particular, we have established specific band structures as "molecular fingerprints" corresponding to overtones and combinations vibrational modes involving mainly C-H and O-H functional groups for sample analysis of QuSomesTM. Moreover, we have demonstrated that the nanovesicles formed by such lipids in polar solvents show high stability and obey Beer's law at low concentration. The results reported in this study may find applications in various field including the development of lipids based drug delivery systems.

  14. Fourier transform infrared spectroscopic imaging identifies early biochemical markers of tissue damage

    NASA Astrophysics Data System (ADS)

    Varma, Vishal K.; Ohlander, Samuel; Nguyen, Peter; Vendryes, Christopher; Parthiban, Sujeeth; Hamilton, Blake; Wallis, M. Chad; Kajdacsy-Balla, Andre; Hannaford, Blake; Lendvay, Thomas; Hotaling, James M.; Walsh, Michael J.

    2014-03-01

    Fourier Transform Infrared (FT-IR) spectroscopic imaging can allow for the rapid imaging of tissue biochemistry in a label-free and non-perturbing fashion. With the rapid adoption of new minimally invasive surgery (MIS) technologies over the last 20 years, adequate skill to safely and effectively use these technologies may not be achieved and risk of undue physical pressure being placed on tissues is a concern. Previous work has demonstrated that a number of histological stains can detect tissue damage, however, this process requires the initiation and progression of a signaling cascade that results in the epitope of interest being expressed. We proposed to identify the early biochemical markers associated with physical tissue damage from applied forces, thus not requiring transcriptional and translational protein synthesis as traditional immunohistochemistry does. To demonstrate that FT-IR can measure biochemical changes in tissues that have undergone physical force, we took ex-vivo lamb's liver that had been freshly excised and applied varying levels of physical pressure (0kPa to 30kPa). Tissues were then formalin-fixed, paraffin-embedded, and sectioned on to glass for H and E staining to identify damage and on to an IR slide for FT-IR imaging. Regions of interest containing hepatocytes were identified and average FT-IR spectra were extracted from the damaged and undamaged livers. FT-IR spectra showed clear biochemical changes associated with tissue damage. In addition, chemical changes could be observed proceeding histological changes observed when using conventional staining approaches.

  15. A combined far-infrared spectroscopic and electrochemical approach for the study of iron-sulfur proteins.

    PubMed

    El Khoury, Youssef; Hellwig, Petra

    2011-10-04

    Herein, we present the development of a far-infrared spectroscopic approach for studying metalloenzyme active sites in a redox-dependent manner. An electrochemical cell with 5 mm path and based on silicon windows was found to be appropriate for the measurement of aqueous solutions down to 200 cm(-1) . The cell was probed with the infrared redox signature of the metal-ligand vibrations of different iron-sulfur proteins. Each Fe-S cluster type was found to show a specific spectral signature. As a common feature, a downshift of the frequency of the Fe-S vibrations was seen upon reduction, in line with the increase of the Fe-S bond. This downshift was found to be fully reversible. Electrochemically induced FTIR difference spectroscopy in the far infrared is now possible, opening new perspectives on the understanding of metalloproteins in function of the redox state.

  16. Adulteration screening of botanical materials by a sensitive and model-free approach using infrared spectroscopic imaging and two-dimensional correlation infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Chen, Jian-bo; Zhou, Qun; Sun, Su-qin

    2016-11-01

    Infrared (IR) spectroscopy is often used as a simple, fast, and green method for the adulteration screening of botanical materials for foods and herbs. However, the overlapping of absorption signals of various substances significantly decrease the sensitivity and specificity of IR spectroscopy in the detection of adulterated samples. In this research, a model-free approach is proposed for the sensitive and non-targeted screening of botanical materials adulterated by adding other plant materials. First, the spectra of the entities in the test sample are collected by near-infrared spectroscopic imaging and clustered by unsupervised pattern recognition methods. The sample may be adulterated if there are two or more clusters of the entities. Next, the entities of different clusters are characterized by mid-infrared spectroscopy to interpret the chemical compositions to determine the clustering is caused whether by adulteration or other reasons. Second derivative spectroscopy and two-dimensional correlation spectroscopy are often needed to resolve the overlapped bands mathematically or experimentally to find the characteristic signals to identify the authentic and adulterant entities. The feasibility of this approach was proved by the simulated adulterated sample of saffron. In conclusion, botanical materials adulterated by adding other plant materials can be detected by a simple, fast, sensitive, and green screening approach using IR spectroscopic imaging, two-dimensional correlation spectroscopy, and necessary chemometrics techniques.

  17. Noninvasive, near infrared spectroscopic-measured muscle pH and PO2 indicate tissue perfusion for cardiac surgical patients undergoing cardiopulmonary bypass

    NASA Technical Reports Server (NTRS)

    Soller, Babs R.; Idwasi, Patrick O.; Balaguer, Jorge; Levin, Steven; Simsir, Sinan A.; Vander Salm, Thomas J.; Collette, Helen; Heard, Stephen O.

    2003-01-01

    OBJECTIVE: To determine whether near infrared spectroscopic measurement of tissue pH and Po2 has sufficient accuracy to assess variation in tissue perfusion resulting from changes in blood pressure and metabolic demand during cardiopulmonary bypass. DESIGN: Prospective clinical study. SETTING: Academic medical center. SUBJECTS: Eighteen elective cardiac surgical patients. INTERVENTION: Cardiac surgery under cardiopulmonary bypass. MEASUREMENTS AND MAIN RESULTS: A near infrared spectroscopic fiber optic probe was placed over the hypothenar eminence. Reference Po2 and pH sensors were inserted in the abductor digiti minimi (V). Data were collected every 30 secs during surgery and for 6 hrs following cardiopulmonary bypass. Calibration equations developed from one third of the data were used with the remaining data to investigate sensitivity of the near infrared spectroscopic measurement to physiologic changes resulting from cardiopulmonary bypass. Near infrared spectroscopic and reference pH and Po2 measurements were compared for each subject using standard error of prediction. Near infrared spectroscopic pH and Po2 at baseline were compared with values during cardiopulmonary bypass just before rewarming commenced (hypotensive, hypothermic), after rewarming (hypotensive, normothermic) just before discontinuation of cardiopulmonary bypass, and at 6 hrs following cardiopulmonary bypass (normotensive, normothermic) using mixed-model analysis of variance. Near infrared spectroscopic pH and Po2 were well correlated with the invasive measurement of pH (R2 =.84) and Po2 (R 2 =.66) with an average standard error of prediction of 0.022 +/- 0.008 pH units and 6 +/- 3 mm Hg, respectively. The average difference between the invasive and near infrared spectroscopic measurement was near zero for both the pH and Po2 measurements. Near infrared spectroscopic Po2 significantly decreased 50% on initiation of cardiopulmonary bypass and remained depressed throughout the bypass and

  18. Noninvasive, near infrared spectroscopic-measured muscle pH and PO2 indicate tissue perfusion for cardiac surgical patients undergoing cardiopulmonary bypass

    NASA Technical Reports Server (NTRS)

    Soller, Babs R.; Idwasi, Patrick O.; Balaguer, Jorge; Levin, Steven; Simsir, Sinan A.; Vander Salm, Thomas J.; Collette, Helen; Heard, Stephen O.

    2003-01-01

    OBJECTIVE: To determine whether near infrared spectroscopic measurement of tissue pH and Po2 has sufficient accuracy to assess variation in tissue perfusion resulting from changes in blood pressure and metabolic demand during cardiopulmonary bypass. DESIGN: Prospective clinical study. SETTING: Academic medical center. SUBJECTS: Eighteen elective cardiac surgical patients. INTERVENTION: Cardiac surgery under cardiopulmonary bypass. MEASUREMENTS AND MAIN RESULTS: A near infrared spectroscopic fiber optic probe was placed over the hypothenar eminence. Reference Po2 and pH sensors were inserted in the abductor digiti minimi (V). Data were collected every 30 secs during surgery and for 6 hrs following cardiopulmonary bypass. Calibration equations developed from one third of the data were used with the remaining data to investigate sensitivity of the near infrared spectroscopic measurement to physiologic changes resulting from cardiopulmonary bypass. Near infrared spectroscopic and reference pH and Po2 measurements were compared for each subject using standard error of prediction. Near infrared spectroscopic pH and Po2 at baseline were compared with values during cardiopulmonary bypass just before rewarming commenced (hypotensive, hypothermic), after rewarming (hypotensive, normothermic) just before discontinuation of cardiopulmonary bypass, and at 6 hrs following cardiopulmonary bypass (normotensive, normothermic) using mixed-model analysis of variance. Near infrared spectroscopic pH and Po2 were well correlated with the invasive measurement of pH (R2 =.84) and Po2 (R 2 =.66) with an average standard error of prediction of 0.022 +/- 0.008 pH units and 6 +/- 3 mm Hg, respectively. The average difference between the invasive and near infrared spectroscopic measurement was near zero for both the pH and Po2 measurements. Near infrared spectroscopic Po2 significantly decreased 50% on initiation of cardiopulmonary bypass and remained depressed throughout the bypass and

  19. Book Review: Reiner Salzer and Heinz W. Siesler (Eds.): Infrared and Raman spectroscopic imaging, 2nd ed.

    SciTech Connect

    Moore, David Steven

    2015-05-10

    This second edition of "Infrared and Raman Spectroscopic Imaging" propels practitioners in that wide-ranging field, as well as other readers, to the current state of the art in a well-produced and full-color, completely revised and updated, volume. This new edition chronicles the expanded application of vibrational spectroscopic imaging from yesterday's time-consuming point-by-point buildup of a hyperspectral image cube, through the improvements afforded by the addition of focal plane arrays and line scan imaging, to methods applicable beyond the diffraction limit, instructs the reader on the improved instrumentation and image and data analysis methods, and expounds on their application to fundamental biomedical knowledge, food and agricultural surveys, materials science, process and quality control, and many others.

  20. Book Review: Reiner Salzer and Heinz W. Siesler (Eds.): Infrared and Raman spectroscopic imaging, 2nd ed.

    DOE PAGES

    Moore, David Steven

    2015-05-10

    This second edition of "Infrared and Raman Spectroscopic Imaging" propels practitioners in that wide-ranging field, as well as other readers, to the current state of the art in a well-produced and full-color, completely revised and updated, volume. This new edition chronicles the expanded application of vibrational spectroscopic imaging from yesterday's time-consuming point-by-point buildup of a hyperspectral image cube, through the improvements afforded by the addition of focal plane arrays and line scan imaging, to methods applicable beyond the diffraction limit, instructs the reader on the improved instrumentation and image and data analysis methods, and expounds on their application to fundamentalmore » biomedical knowledge, food and agricultural surveys, materials science, process and quality control, and many others.« less

  1. Subcellular biochemical investigation of purkinje neurons using synchrotron radiation fourier transform infrared spectroscopic imaging with a focal plane array detector.

    PubMed

    Hackett, Mark J; Borondics, Ferenc; Brown, Devin; Hirschmugl, Carol; Smith, Shari E; Paterson, Phyllis G; Nichol, Helen; Pickering, Ingrid J; George, Graham N

    2013-07-17

    Coupling Fourier transform infrared spectroscopy with focal plane array detectors at synchrotron radiation sources (SR-FTIR-FPA) has provided a rapid method to simultaneously image numerous biochemical markers in situ at diffraction limited resolution. Since cells and nuclei are well resolved at this spatial resolution, a direct comparison can be made between FTIR functional group images and the histology of the same section. To allow histological analysis of the same section analyzed with infrared imaging, unfixed air-dried tissue sections are typically fixed (after infrared spectroscopic analysis is completed) via immersion fixation. This post fixation process is essential to allow histological staining of the tissue section. Although immersion fixation is a common practice in this filed, the initial rehydration of the dehydrated unfixed tissue can result in distortion of subcellular morphology and confound correlation between infrared images and histology. In this study, vapor fixation, a common choice in other research fields where postfixation of unfixed tissue sections is required, was employed in place of immersion fixation post spectroscopic analysis. This method provided more accurate histology with reduced distortions as the dehydrated tissue section is fixed in vapor rather than during rehydration in an aqueous fixation medium. With this approach, accurate correlation between infrared images and histology of the same section revealed that Purkinje neurons in the cerebellum are rich in cytosolic proteins and not depleted as once thought. In addition, we provide the first direct evidence of intracellular lactate within Purkinje neurons. This highlights the significant potential for future applications of SR-FTIR-FPA imaging to investigate cellular lactate under conditions of altered metabolic demand such as increased brain activity and hypoxia or ischemia.

  2. Subcellular Biochemical Investigation of Purkinje Neurons Using Synchrotron Radiation Fourier Transform Infrared Spectroscopic Imaging with a Focal Plane Array Detector

    PubMed Central

    2013-01-01

    Coupling Fourier transform infrared spectroscopy with focal plane array detectors at synchrotron radiation sources (SR-FTIR-FPA) has provided a rapid method to simultaneously image numerous biochemical markers in situ at diffraction limited resolution. Since cells and nuclei are well resolved at this spatial resolution, a direct comparison can be made between FTIR functional group images and the histology of the same section. To allow histological analysis of the same section analyzed with infrared imaging, unfixed air-dried tissue sections are typically fixed (after infrared spectroscopic analysis is completed) via immersion fixation. This post fixation process is essential to allow histological staining of the tissue section. Although immersion fixation is a common practice in this filed, the initial rehydration of the dehydrated unfixed tissue can result in distortion of subcellular morphology and confound correlation between infrared images and histology. In this study, vapor fixation, a common choice in other research fields where postfixation of unfixed tissue sections is required, was employed in place of immersion fixation post spectroscopic analysis. This method provided more accurate histology with reduced distortions as the dehydrated tissue section is fixed in vapor rather than during rehydration in an aqueous fixation medium. With this approach, accurate correlation between infrared images and histology of the same section revealed that Purkinje neurons in the cerebellum are rich in cytosolic proteins and not depleted as once thought. In addition, we provide the first direct evidence of intracellular lactate within Purkinje neurons. This highlights the significant potential for future applications of SR-FTIR-FPA imaging to investigate cellular lactate under conditions of altered metabolic demand such as increased brain activity and hypoxia or ischemia. PMID:23638613

  3. Infrared Spectroscopic Analyses of Sulfate, Nitrate, and Carbonate-bearing Atacama Desert Soils: Analogs for the Interpretation of Infrared Spectra from the Martian Surface

    NASA Technical Reports Server (NTRS)

    Dalton, J. B.; Dalton, J. B.; Ewing, S. A.; Amundson, R.; McKay, C. P.

    2005-01-01

    The Atacama Desert of northern Chile is the driest desert on Earth, receiving only a few mm of rain per decade. The Mars climate may, in the past, have been punctuated by short-lived episodes of aqueous activity. The paleo-Martian environment may have had aqueous conditions similar to the current conditions that exist in the Atacama, and Mars soils may have formed with soil chemistry and mineralogy similar to those found in the Atacama. Remote and in-situ analysis of the Martian surface using infrared technology has a long heritage. Future investigations of the subsurface mineralogy are likely to build upon this heritage, and will benefit from real life lessons to be learned from terrestrial analog studies. To that end, preliminary results from a near- and mid-infrared spectroscopic study of Atacama soil profiled at a range of depths are presented.

  4. A spectroscopic comparison of selected Chinese kaolinite, coal bearing kaolinite and halloysite--a mid-infrared and near-infrared study.

    PubMed

    Cheng, Hongfei; Yang, Jing; Liu, Qinfu; Zhang, Jinshan; Frost, Ray L

    2010-11-01

    Mid-infrared (MIR) and near-infrared (NIR) spectroscopy have been compared and evaluated for differentiating kaolinite, coal bearing kaolinite and halloysite. Kaolinite, coal bearing kaolinite and halloysite are the three relative abundant minerals of the kaolin group, especially in China. In the MIR spectra, the differences are shown in the 3000-3600 cm⁻¹ between kaolinite and halloysite. It cannot obviously differentiate the kaolinite and halloysite, leaving alone kaolinite and coal bearing kaolinite. However, NIR, together with MIR, gives us the sufficient evidence to differentiate the kaolinite and halloysite, especially kaolinite and coal bearing kaolinite. There are obvious differences between kaolinite and halloysite in all range of their spectra, and they also show some difference between kaolinite and coal bearing kaolinite. Therefore, the reproducibility of measurement, signal to noise ratio and richness of qualitative information should be simultaneously considered for proper selection of a spectroscopic method for mineral analysis.

  5. Spectroscopic-ellipsometric study of native oxide removal by liquid phase HF process

    NASA Astrophysics Data System (ADS)

    Kurhekar, Anil Sudhakar; Apte, Prakash R.

    2013-02-01

    Ex situ spectroscopic ellipsometry (SE) measurements have been employed to investigate the effect of liquid-phase hydrofluoric acid (HF) cleaning on Si<100> surfaces for microelectromechanical systems application. The hydrogen terminated (H-terminated) Si surface was realized as an equivalent dielectric layer, and SE measurements are performed. The SE analyses indicate that after a 20-s 100:5 HF dip with rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed and analyzed by the ex-situ SE. Evidence for desorption of the H-terminated Si surface layer is studied using Fourier transform infrared spectroscopy and ellipsometry, and discussed. This piece of work explains the usage of an ex situ, non-destructive technique capable of showing state of passivation, the H-termination of Si<100> surfaces.

  6. Spectroscopic-ellipsometric study of native oxide removal by liquid phase HF process

    PubMed Central

    Kurhekar, Anil Sudhakar; Apte, Prakash R

    2014-01-01

    Ex situ spectroscopic ellipsometry (SE) measurements have been employed to investigate the effect of liquid-phase hydrofluoric acid (HF) cleaning on Si<100> surfaces for microelectromechanical systems application. The hydrogen terminated (H-terminated) Si surface was realized as an equivalent dielectric layer, and SE measurements are performed. The SE analyses indicate that after a 20-s 100:5 HF dip with rinse, the Si (100) surface was passivated by the hydrogen termination and remained chemically stable. Roughness of the HF-etched bare Si (100) surface was observed and analyzed by the ex-situ SE. Evidence for desorption of the H-terminated Si surface layer is studied using Fourier transform infrared spectroscopy and ellipsometry, and discussed. This piece of work explains the usage of an ex situ, non-destructive technique capable of showing state of passivation, the H-termination of Si<100> surfaces. PMID:24619506

  7. Towards a wearable near infrared spectroscopic probe for monitoring concentrations of multiple chromophores in biological tissue in vivo

    NASA Astrophysics Data System (ADS)

    Chitnis, Danial; Airantzis, Dimitrios; Highton, David; Williams, Rhys; Phan, Phong; Giagka, Vasiliki; Powell, Samuel; Cooper, Robert J.; Tachtsidis, Ilias; Smith, Martin; Elwell, Clare E.; Hebden, Jeremy C.; Everdell, Nicholas

    2016-06-01

    The first wearable multi-wavelength technology for functional near-infrared spectroscopy has been developed, based on a custom-built 8-wavelength light emitting diode (LED) source. A lightweight fibreless probe is designed to monitor changes in the concentrations of multiple absorbers (chromophores) in biological tissue, the most dominant of which at near-infrared wavelengths are oxyhemoglobin and deoxyhemoglobin. The use of multiple wavelengths enables signals due to the less dominant chromophores to be more easily distinguished from those due to hemoglobin and thus provides more complete and accurate information about tissue oxygenation, hemodynamics, and metabolism. The spectroscopic probe employs four photodiode detectors coupled to a four-channel charge-to-digital converter which includes a charge integration amplifier and an analogue-to-digital converter (ADC). Use of two parallel charge integrators per detector enables one to accumulate charge while the other is being read out by the ADC, thus facilitating continuous operation without dead time. The detector system has a dynamic range of about 80 dB. The customized source consists of eight LED dies attached to a 2 mm × 2 mm substrate and encapsulated in UV-cured epoxy resin. Switching between dies is performed every 20 ms, synchronized to the detector integration period to within 100 ns. The spectroscopic probe has been designed to be fully compatible with simultaneous electroencephalography measurements. Results are presented from measurements on a phantom and a functional brain activation study on an adult volunteer, and the performance of the spectroscopic probe is shown to be very similar to that of a benchtop broadband spectroscopy system. The multi-wavelength capabilities and portability of this spectroscopic probe will create significant opportunities for in vivo studies in a range of clinical and life science applications.

  8. Towards a wearable near infrared spectroscopic probe for monitoring concentrations of multiple chromophores in biological tissue in vivo

    PubMed Central

    Chitnis, Danial; Airantzis, Dimitrios; Highton, David; Williams, Rhys; Phan, Phong; Giagka, Vasiliki; Powell, Samuel; Cooper, Robert J.; Tachtsidis, Ilias; Smith, Martin; Elwell, Clare E.; Hebden, Jeremy C.; Everdell, Nicholas

    2016-01-01

    The first wearable multi-wavelength technology for functional near-infrared spectroscopy has been developed, based on a custom-built 8-wavelength light emitting diode (LED) source. A light-weight fibreless probe is designed to monitor changes in the concentrations of multiple absorbers (chromophores) in biological tissue, the most dominant of which at near-infrared wavelengths are oxyhemoglobin and deoxyhemoglobin. The use of multiple wavelengths enables signals due to the less dominant chromophores to be more easily distinguished from those due to hemoglobin and thus provides more complete and accurate information about tissue oxygenation, hemodynamics, and metabolism. The spectroscopic probe employs four photodiode detectors coupled to a four-channel charge-to-digital converter which includes a charge integration amplifier and an analogue-to-digital converter (ADC). Use of two parallel charge integrators per detector enables one to accumulate charge while the other is being read out by the ADC, thus facilitating continuous operation without dead time. The detector system has a dynamic range of about 80 dB. The customized source consists of eight LED dies attached to a 2 mm × 2 mm substrate and encapsulated in UV-cured epoxy resin. Switching between dies is performed every 20 ms, synchronized to the detector integration period to within 100 ns. The spectroscopic probe has been designed to be fully compatible with simultaneous electroencephalography measurements. Results are presented from measurements on a phantom and a functional brain activation study on an adult volunteer, and the performance of the spectroscopic probe is shown to be very similar to that of a benchtop broadband spectroscopy system. The multi-wavelength capabilities and portability of this spectroscopic probe will create significant opportunities for in vivo studies in a range of clinical and life science applications. PMID:27370501

  9. Total internal reflection ellipsometry: principles and applications.

    PubMed

    Arwin, Hans; Poksinski, Michal; Johansen, Knut

    2004-05-20

    A concept for a measurement technique based on ellipsometry in conditions of total internal reflection is presented. When combined with surface plasmon resonance (SPR) effects, this technique becomes powerful for monitoring and analyzing adsorption and desorption on thin semitransparent metal films as well as for analyzing the semitransparent films themselves. We call this technique total internal reflection ellipsometry (TIRE). The theory of ellipsometry under total internal reflection combined with SPR is discussed for some simple cases. For more advanced cases and to prove the concept, simulations are performed with the Fresnel formalism. The use of TIRE is exemplified by applications in protein adsorption, corrosion monitoring, and adsorption from opaque liquids on metal surfaces. Simulations and experiments show greatly enhanced thin-film sensitivity compared with ordinary ellipsometry.

  10. QUANTITATIVE FOURIER TRANSFORM INFRARED SPECTROSCOPIC INVESTIGATION OF HUMIC SUBSTANCE FUNCTIONAL GROUP COMPOSITION

    EPA Science Inventory

    Infrared (IR) spectroscopy has been widely used for the structural investigation of humic substances. Although Fourier Transform Infrared (FTIR) instrumentation has been available for sometime, relatively little work with these instruments has been reported for humic substances,...

  11. QUANTITATIVE FOURIER TRANSFORM INFRARED SPECTROSCOPIC INVESTIGATION OF HUMIC SUBSTANCE FUNCTIONAL GROUP COMPOSITION

    EPA Science Inventory

    Infrared (IR) spectroscopy has been widely used for the structural investigation of humic substances. Although Fourier Transform Infrared (FTIR) instrumentation has been available for sometime, relatively little work with these instruments has been reported for humic substances,...

  12. Infrared Spectroscopic Evidence of Surface Speciation of Amino Acids on Titanium Dioxide

    NASA Astrophysics Data System (ADS)

    Jonsson, C. M.; Jonsson, C. L.; Parikh, S. J.; Sverjensky, D. A.; Cleaves, H. J.; Hazen, R. M.

    2008-12-01

    Interactions that occur at the interface between molecules and mineral surfaces in the presence of water are integral to many chemical and physical processes, including the behavior of pollutants in the environment, metal implants in the human body, and perhaps the origin of life. During the emergence of life, mineral surfaces may have played a role in the selection of amino acids, leading to the formation of proteins that are essential building blocks of life. To investigate this hypothesis, we are studying two amino acids, glutamic (Glu) and aspartic (Asp) acid, and their adsorption to the rutile form of titanium dioxide as a function of pH and surface coverage in electrolyte solutions. The objective is to get a fundamental understanding of the speciation and coordination chemistry of these amino acids at the rutile surface. We used attenuated total reflectance (ATR) Fourier transform infrared (FTIR) spectroscopy to investigate the adsorption of Glu on rutile, and a previously published ATR-FTIR study [1] of Asp and Glu adsorption on an amorphous titanium dioxide film was used as a guide to peak assignment and interpretation of our FTIR spectra. Binding of Glu to both surfaces occurs primarily through one or both of the carboxyl groups, implying that at least two types of surface complexes are formed in a proportion presumably dependent on surface coverage and pH. The interpretation of our results suggests that Glu binds to rutile in a mixed chelating-monodentate fashion involving both carboxyl groups (Glu lying down at the surface), and in a chelating fashion involving only the gamma carboxyl group (Glu standing up at the surface). FTIR results also show that the intensity of the amine peak increases with sorption, which is possibly a consequence of the amine group being brought closer to the surface but not binding directly to it. Glu adsorption on rutile is favored at low pH, based on results from batch adsorption experiments. We have commenced a systematic

  13. The GTC mid-infrared spectroscopic program of primitive outer-belt asteroids

    NASA Astrophysics Data System (ADS)

    Licandro, J.; Alvarez-Iglesias, C. Carlos; Cabrera-Lavers, A.; Ali-Lagoa, V.; Pinilla-Alonso, N.; Campins, H.; de Leon, J.; Kelley, M.

    2014-07-01

    Asteroids in the outer edge of the asteroid belt (Cybeles, Hildas, and Jupiter Trojans) may provide a number of clues to the origin and evolution of the asteroid belt and the formation of our planetary system. They have a pristine composition, experienced little heating and may contain a significant fraction of ice in their interiors. The origin of these populations is still under debate. Levison et al. (2009) suggested that a large fraction of these bodies are transneptunian objects (TNOs) moved to these resonances in an early epoch of the Solar System called the ''Late Heavy Bombardment'' (LHB). To compare the physical properties of these asteroid populations with TNOs and comets is thus a strong test of dynamical models. In mid 2013, we started a mid-infrared photometric and spectroscopic program in the N-band using the CANARICAM camera-spectrograph at the 10.4-m GTC telescope at the ''Roque de los Muchachos'' Obserbatory (Canary Islands, Spain). We aim to study the surface composition and key properties such as radius, albedo, and thermal inertia based on their low-resolution 8--13-micron spectra and N-band photometry. We already obtained the spectra of 5 objects, that of (225) Henrieta is shown as an example in the Figure. The three published spectra of Trojan asteroids (Emery et al. 2006) and of (65) Cybele (Licandro et al. 2011) exhibit clear emissivity features from which the compositional and physical properties can be inferred. The spectra of these objects strongly resemble one another, presenting an emission plateau due to silicates at about 9.1-11.5 microns (the Si-O stretch fundamental). Fine-grained silicates in a very porous (fairly castle) structure, and no other mineral group (Emery et al. 2006, Vernazza et al. 2012), reproduce the major features of the Trojans and Cybele asteroid spectra. In this work, we present the preliminary results of our observational program including the N-band spectra, size, and albedo of the already observed 5 asteroids

  14. A Monitoring Campaign for Luhman 16AB. I. Detection of Resolved Near-infrared Spectroscopic Variability

    NASA Astrophysics Data System (ADS)

    Burgasser, Adam J.; Gillon, Michaël; Faherty, Jacqueline K.; Radigan, Jacqueline; Triaud, Amaury H. M. J.; Plavchan, Peter; Street, Rachel; Jehin, E.; Delrez, L.; Opitom, C.

    2014-04-01

    We report resolved near-infrared spectroscopic monitoring of the nearby L dwarf/T dwarf binary WISE J104915.57-531906.1AB (Luhman 16AB), as part of a broader campaign to characterize the spectral energy distribution and temporal variability of this system. A continuous 45 minute sequence of low-resolution IRTF/SpeX data spanning 0.8-2.4 μm were obtained, concurrent with combined-light optical photometry with ESO/TRAPPIST. Our spectral observations confirm the flux reversal of this binary, and we detect a wavelength-dependent decline in the relative spectral fluxes of the two components coincident with a decline in the combined-light optical brightness of the system over the course of the observation. These data are successfully modeled as a combination of achromatic (brightness) and chromatic (color) variability in the T0.5 Luhman 16B, consistent with variations in overall cloud opacity; and no significant variability was found in L7.5 Luhman 16A, consistent with recent resolved photometric monitoring. We estimate a peak-to-peak amplitude of 13.5% at 1.25 μm over the full light curve. Using a simple two-spot brightness temperature model for Luhman 16B, we infer an average cold covering fraction of ≈30%-55%, varying by 15%-30% over a rotation period assuming a ≈200-400 K difference between hot and cold regions. We interpret these variations as changes in the covering fraction of a high cloud deck and corresponding "holes" which expose deeper, hotter cloud layers, although other physical interpretations are possible. A Rhines scale interpretation for the size of the variable features explains an apparent correlation between period and amplitude for Luhman 16B and the variable T dwarfs SIMP 0136+0933 and 2MASS J2139+0220, and predicts relatively fast winds (1-3 km s-1) for Luhman 16B consistent with light curve evolution on an advective time scale (1-3 rotation periods). The strong variability observed in this flux reversal brown dwarf pair supports the model of

  15. A monitoring campaign for Luhman 16AB. I. Detection of resolved near-infrared spectroscopic variability

    SciTech Connect

    Burgasser, Adam J.; Gillon, Michaël; Jehin, E.; Delrez, L.; Opitom, C.; Faherty, Jacqueline K.; Radigan, Jacqueline; Triaud, Amaury H. M. J.; Plavchan, Peter

    2014-04-10

    We report resolved near-infrared spectroscopic monitoring of the nearby L dwarf/T dwarf binary WISE J104915.57–531906.1AB (Luhman 16AB), as part of a broader campaign to characterize the spectral energy distribution and temporal variability of this system. A continuous 45 minute sequence of low-resolution IRTF/SpeX data spanning 0.8-2.4 μm were obtained, concurrent with combined-light optical photometry with ESO/TRAPPIST. Our spectral observations confirm the flux reversal of this binary, and we detect a wavelength-dependent decline in the relative spectral fluxes of the two components coincident with a decline in the combined-light optical brightness of the system over the course of the observation. These data are successfully modeled as a combination of achromatic (brightness) and chromatic (color) variability in the T0.5 Luhman 16B, consistent with variations in overall cloud opacity; and no significant variability was found in L7.5 Luhman 16A, consistent with recent resolved photometric monitoring. We estimate a peak-to-peak amplitude of 13.5% at 1.25 μm over the full light curve. Using a simple two-spot brightness temperature model for Luhman 16B, we infer an average cold covering fraction of ≈30%-55%, varying by 15%-30% over a rotation period assuming a ≈200-400 K difference between hot and cold regions. We interpret these variations as changes in the covering fraction of a high cloud deck and corresponding 'holes' which expose deeper, hotter cloud layers, although other physical interpretations are possible. A Rhines scale interpretation for the size of the variable features explains an apparent correlation between period and amplitude for Luhman 16B and the variable T dwarfs SIMP 0136+0933 and 2MASS J2139+0220, and predicts relatively fast winds (1-3 km s{sup –1}) for Luhman 16B consistent with light curve evolution on an advective time scale (1-3 rotation periods). The strong variability observed in this flux reversal brown dwarf pair supports

  16. One- and two-dimensional infrared spectroscopic studies of solution-phase homogeneous catalysis and spin-forbidden reactions

    SciTech Connect

    Sawyer, Karma Rae

    2008-12-01

    Understanding chemical reactions requires the knowledge of the elementary steps of breaking and making bonds, and often a variety of experimental techniques are needed to achieve this goal. The initial steps occur on the femto- through picosecond time-scales, requiring the use of ultrafast spectroscopic methods, while the rate-limiting steps often occur more slowly, requiring alternative techniques. Ultrafast one and two-dimensional infrared and step-scan FTIR spectroscopies are used to investigate the photochemical reactions of four organometallic complexes. The analysis leads to a detailed understanding of mechanisms that are general in nature and may be applicable to a variety of reactions.

  17. New background correction method for liquid chromatography with diode array detection, infrared spectroscopic detection and Raman spectroscopic detection.

    PubMed

    Boelens, Hans F M; Dijkstra, Reyer J; Eilers, Paul H C; Fitzpatrick, Fiona; Westerhuis, Johan A

    2004-11-19

    A new method to eliminate the background spectrum (EBS) during analyte elution in column liquid chromatography (LC) coupled to spectroscopic techniques is proposed. This method takes into account the shape and also intensity differences of the background eluent spectrum. This allows the EBS method to make a better estimation of the background eluent spectrum during analyte elution. This is an advantage for quantification as well as for identification of analytes. The EBS method uses a two-step procedure. First, the baseline spectra are modeled using a limited number of principal components (PCs). Subsequently, an asymmetric least squares (asLS) regression method is applied using these principal components to correct the measured spectra during elution for the background contribution. The asymmetric least squares regression needs one parameter, the asymmetry factor p. This asymmetry factor determines relative weight of positive and negative residuals. Simulations are performed to test the EBS method in well-defined situations. The effect of spectral noise on the performance and the sensitivity of the EBS method for the value of the asymmetry factorp is tested. Two applications of the EBS method are discussed. In the first application, the goal is to extract the analyte spectrum from an LC-Raman analysis. In this case, the EBS method facilitates easy identification of unknown analytes using spectral libraries. In a second application, the EBS method is used for baseline correction in LC-diode array detection (DAD) analysis of polymeric standards during a gradient elution separation. It is shown that the EBS method yields a good baseline correction, without the need to perform a blank chromatographic run.

  18. Capillary waves and ellipsometry experiments

    NASA Astrophysics Data System (ADS)

    Bonn, D.; Wegdam, G. H.

    1992-09-01

    The inclusion of higher-order terms in the capillary-wave Hamiltonian may reduce the contributions of these fluctuations to the ellipsometric coefficients. We show that the renormalization of capillary waves at a fluid-fluid interface by Sengers and van Leeuwen [Phys. Rev. A 39 (1989) 6346] using the wave vector-dependent surface tension that follows from the coupled mode theory by Meunier [Phys. France 48 (1987)1819] yields a satisfactory agreement with recent ellipsometry measurements by Schmidt [Phys. Rev. A 38 (1988) 567]. The interface is viewed upon as an intrinsic interface broadened by capillary waves. We suppose that the cutoff wave vector q_{max} that follows from mode-coupling theory marks the transition from the short-wavelength bulk-like fluctuations that contribute to the bare surface tension to the long-wavelength capillary wave-like fluctuations that contribute to the full surface tension. This enables us to calculate, without any adjustable parameters, both the ratio of the bare and experimental surface tension and the universal constant for the elliptical thickness of the interface. Both agree remarkably well with experimental values.

  19. In-situ monitoring of the growth of Bi2 Te2 and Sb2 Te3 films and Bi2 Te3-Sb2 Te3 superlattice using spectroscopic ellipsometry

    NASA Astrophysics Data System (ADS)

    Cui, Hao; Bhat, Ishwara; O'Quinn, Brooks; Venkatasubramanian, Rama

    2001-11-01

    In this work, we present in-situ monitoring of the growth of bismuth telluride (Bi2Te3) and antimony telluride (Sb2Te3) thin films as well as Bi2 Te3-Sb2Te3 superlattice using a spectroscopic ellipsometer (SE). Bi2Te3 and Sb2 Te3 films were grown by metalorganic chemical vapor deposition (MOCVD) at 350 C. A44-wavelength ellipsometer with spectral range from 404 nm to 740 nm was used in this work. The optical constants of Bi2 Te3 and Sb2Te3 at growth temperature were determined by fitting a model to the extracted in-situ SE data of optically thick Bi2 Te3 and Sb2 Te3 films. Compared to the optical constants of Bi2 Te3 and Sb2 Te3 at room temperature, significant temperature dependence was observed. Using their optical constants at growth temperature, the in-situ growth of Bi2 Te3 and Sb2 Te3 thin films were modeled and excellent fit between the experimental data and data generated from the best-fit model was obtained. In-situ growth of different Bi2 Te3-Sb2 Te3 superlattices was also monitored and modeled. The growth of Bi2 Te3 and Sb2 Te3 layers can be seen clearly in in-situ SE data. Modeling of in-situ superlattice growth shows perfect superlattice growth with an abrupt interface between the two constituent films.

  20. Spectroscopic properties in Er3+-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials

    PubMed Central

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-01-01

    Transparent Er3+-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH−) content. Enhanced 2.7 μm emission was achieved from Er3+-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er3+-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10−20 cm2). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers. PMID:28266570

  1. Spectroscopic properties in Er(3+)-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials.

    PubMed

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-03-07

    Transparent Er(3+)-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH(-)) content. Enhanced 2.7 μm emission was achieved from Er(3+)-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er(3+)-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10(-20) cm(2)). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers.

  2. Spectroscopic properties in Er3+-doped germanotellurite glasses and glass ceramics for mid-infrared laser materials

    NASA Astrophysics Data System (ADS)

    Kang, Shiliang; Xiao, Xiudi; Pan, Qiwen; Chen, Dongdan; Qiu, Jianrong; Dong, Guoping

    2017-03-01

    Transparent Er3+-doped germanotellurite glass ceramics (GCs) with variable Te/Ge ratio were prepared by controllable heat-treated process. X-ray diffraction (XRD) and transmission electron microscope (TEM) confirmed the formation of nanocrystals in glass matrix. Raman spectra were used to investigate the evolution of glass structure and photon energy. Fourier transform infrared (FTIR) spectra were introduced to characterize the change of hydroxyl group (OH-) content. Enhanced 2.7 μm emission was achieved from Er3+-doped GCs upon excitation with a 980 nm laser diode (LD), and the influence of GeO2 concentration and heat-treated temperature on the spectroscopic properties were also discussed in detail. It is found that the present Er3+-doped GC possesses large stimulated emission cross section at around 2.7 μm (0.85 × 10-20 cm2). The advantageous spectroscopic characteristics suggest that the obtained GC may be a promising material for mid-infrared fiber lasers.

  3. [Analysis of influencing factors on infrared spectroscopic determination of the content of free silica in quartz sand].

    PubMed

    Wang, Xue-Tao; Liu, Jun; Liu, Li-Hua; Zhao, Jian-Yu

    2011-08-01

    To find a suitable method for detecting SiO2 in quartz sand and to analyze the influencing factors on infrared spectroscopic determination of the content of free silica in quartz sand. The infrared spectroscopy was used to detect the free silica content of quartz sand, the various factors of influencing the results were analyzed and the control scheme was proposed. The number of particles less than 5 um and the proportion of free silica content increased with the grinding time. When the grinding time was 10-20 min, the results of detecting the free silica content tended to be stable. When the ashing temperature was below 550 degrees C, there was no effect on the free silica content. Although the silica content decreased slightly at ashing temperature 600 degrees C as compared to ashing temperature 550 degrees C, the difference of the free silica content between 550 degrees C and 600 degrees C was not significant (P > 0.05). When the ashing temperature was 600 degrees C, the free silica content in quartz sand samples did not change obviously in 1 h (F = 4.231, P > 0.05). The free silica content in quartz sand samples decreased significantly at 2 h of ashing time, as compared with 2 h of ashing time (F = 10.231, P < 0.05). The average content of free silica was 88.56% +/- 5.75% by pyrophosphate determination, which was significantly higher than that (21.23% +/- 11.25%) by infrared determination (P < 0.05). There was no significant correlation of the average content of free silica between pyrophosphate determination and infrared determination (r = 0.411, P > 0.05). The free silica contents detected by pyrophosphate determination were significantly higher than those detected by infrared determination for the same quartz sand samples. It is suggested that the method of detecting the free silica contents in quartz sand samples prefers the pyrophosphate determination to infrared determination.

  4. Near-infrared spectroscopic photoacoustic microscopy using a multi-color fiber laser source

    PubMed Central

    Buma, Takashi; Wilkinson, Benjamin C.; Sheehan, Timothy C.

    2015-01-01

    We demonstrate a simple multi-wavelength optical source suitable for spectroscopic optical resolution photoacoustic microscopy (OR-PAM) of lipid-rich tissue. 1064 nm laser pulses are converted to multiple wavelengths beyond 1300 nm via nonlinear optical propagation in a birefringent optical fiber. OR-PAM experiments with lipid phantoms clearly show the expected absorption peak near 1210 nm. We believe this simple multi-color technique is a promising cost-effective approach to spectroscopic OR-PAM of lipid-rich tissue. PMID:26309746

  5. Adsorption of water on porous Vycor glass studied by ellipsometry.

    PubMed

    Alvarez-Herrero, A; Heredero, R L; Bernabeu, E; Levy, D

    2001-02-01

    The variation of the optical properties of porous Vycor glass (Corning, Model 7930) under different relative-humidity conditions was studied. The adsorption of water into the glass pores was investigated with spectroscopic ellipsometry. The change of the refractive index was Deltan approximately 0.04 between 5% and 90% relative humidity. A linear relation between the ellipsometer parameter tan Psi, the amount of water adsorbed in the glass pores, and information about the pore-size distributions was established. The results are in accord with the values obtained from N2 isotherms, transmission electron microscope micrographs, and the manufacturer's specifications (radius of approximately 20 A). The possibility of using this material as a transducer for implementation in a fiber-optic sensor to measure humidity was evaluated.

  6. A MULTIWAVELENGTH STUDY OF CYGNUS X-1: THE FIRST MID-INFRARED SPECTROSCOPIC DETECTION OF COMPACT JETS

    SciTech Connect

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Joern; Grinberg, Victoria E-mail: jclee@cfa.harvard.edu E-mail: hines@stsci.edu E-mail: joern.wilms@sternwarte.uni-erlangen.de

    2011-07-20

    We report on a Spitzer/InfraRed Spectrograph (mid-infrared), RXTE/PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multiwavelength study of the microquasar Cygnus X-1, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break-where the transition from the optically thick to the optically thin regime takes place-at about 2.9 x 10{sup 13} Hz. We then show that the jet's optically thin synchrotron emission accounts for Cygnus X-1's emission beyond 400 keV, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 {mu}m mid-infrared continuum of Cygnus X-1 stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Rayleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f{sub {infinity}} {approx} 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anti-correlation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and Cygnus X-1's environment and/or the companion star's stellar wind.

  7. A Multiwavelength Study of Cygnus X-1: The First Mid-infrared Spectroscopic Detection of Compact Jets

    NASA Astrophysics Data System (ADS)

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Jörn; Grinberg, Victoria

    2011-07-01

    We report on a Spitzer/InfraRed Spectrograph (mid-infrared), RXTE/PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multiwavelength study of the microquasar Cygnus X-1, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break—where the transition from the optically thick to the optically thin regime takes place—at about 2.9 × 1013 Hz. We then show that the jet's optically thin synchrotron emission accounts for Cygnus X-1's emission beyond 400 keV, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 μm mid-infrared continuum of Cygnus X-1 stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Rayleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f ∞ ≈ 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anti-correlation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and Cygnus X-1's environment and/or the companion star's stellar wind.

  8. A Multiwavelength Study of Cygnus X-1: The First Mid-Infrared Spectroscopic Detection of Compact Jets

    NASA Technical Reports Server (NTRS)

    Rahoui, Farid; Lee, Julia C.; Heinz, Sebastian; Hines, Dean C.; Pottschmidt, Katja; Wilms, Joern

    2011-01-01

    We report on a Spitzer/IRS (mid-infrared), RXTE /PCA+HEXTE (X-ray), and Ryle (radio) simultaneous multi-wavelength study of the micro quasar Cygnus X-I, which aimed at an investigation of the origin of its mid-infrared emission. Compact jets were present in two out of three observations, and we show that they strongly contribute to the mid-infrared continuum. During the first observation, we detect the spectral break - where the transition from the optically thick to the optically thin regime takes place - at about 2.9 x 10(exp 13) Hz. We then show that the jet's optically thin synchrotron emission accounts for the Cygnus X-1's emission beyond 400 keY, although it cannot alone explain its 3-200 keV continuum. A compact jet was also present during the second observation, but we do not detect the break, since it has likely shifted to higher frequencies. In contrast, the compact jet was absent during the last observation, and we show that the 5-30 micron mid-infrared continuum of Cygnus X-I stems from the blue supergiant companion star HD 226868. Indeed, the emission can then be understood as the combination of the photospheric Raleigh-Jeans tail and the bremsstrahlung from the expanding stellar wind. Moreover, the stellar wind is found to be clumpy, with a filling factor f(sub infinity) approx.= 0.09-0.10. Its bremsstrahlung emission is likely anti-correlated to the soft X-ray emission, suggesting an anticorrelation between the mass-loss and mass-accretion rates. Nevertheless, we do not detect any mid-infrared spectroscopic evidence of interaction between the jets and the Cygnus X-1's environment and/or companion star's stellar wind.

  9. High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging of human tissue sections towards improving pathology.

    PubMed

    Sreedhar, Hari; Varma, Vishal K; Nguyen, Peter L; Davidson, Bennett; Akkina, Sanjeev; Guzman, Grace; Setty, Suman; Kajdacsy-Balla, Andre; Walsh, Michael J

    2015-01-21

    High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging is an emerging approach to obtain detailed images that have associated biochemical information. FT-IR imaging of tissue is based on the principle that different regions of the mid-infrared are absorbed by different chemical bonds (e.g., C=O, C-H, N-H) within cells or tissue that can then be related to the presence and composition of biomolecules (e.g., lipids, DNA, glycogen, protein, collagen). In an FT-IR image, every pixel within the image comprises an entire Infrared (IR) spectrum that can give information on the biochemical status of the cells that can then be exploited for cell-type or disease-type classification. In this paper, we show: how to obtain IR images from human tissues using an FT-IR system, how to modify existing instrumentation to allow for high-definition imaging capabilities, and how to visualize FT-IR images. We then present some applications of FT-IR for pathology using the liver and kidney as examples. FT-IR imaging holds exciting applications in providing a novel route to obtain biochemical information from cells and tissue in an entirely label-free non-perturbing route towards giving new insight into biomolecular changes as part of disease processes. Additionally, this biochemical information can potentially allow for objective and automated analysis of certain aspects of disease diagnosis.

  10. High-definition Fourier Transform Infrared (FT-IR) Spectroscopic Imaging of Human Tissue Sections towards Improving Pathology

    PubMed Central

    Nguyen, Peter L.; Davidson, Bennett; Akkina, Sanjeev; Guzman, Grace; Setty, Suman; Kajdacsy-Balla, Andre; Walsh, Michael J.

    2015-01-01

    High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging is an emerging approach to obtain detailed images that have associated biochemical information. FT-IR imaging of tissue is based on the principle that different regions of the mid-infrared are absorbed by different chemical bonds (e.g., C=O, C-H, N-H) within cells or tissue that can then be related to the presence and composition of biomolecules (e.g., lipids, DNA, glycogen, protein, collagen). In an FT-IR image, every pixel within the image comprises an entire Infrared (IR) spectrum that can give information on the biochemical status of the cells that can then be exploited for cell-type or disease-type classification. In this paper, we show: how to obtain IR images from human tissues using an FT-IR system, how to modify existing instrumentation to allow for high-definition imaging capabilities, and how to visualize FT-IR images. We then present some applications of FT-IR for pathology using the liver and kidney as examples. FT-IR imaging holds exciting applications in providing a novel route to obtain biochemical information from cells and tissue in an entirely label-free non-perturbing route towards giving new insight into biomolecular changes as part of disease processes. Additionally, this biochemical information can potentially allow for objective and automated analysis of certain aspects of disease diagnosis. PMID:25650759

  11. The design and performance of a mid-infrared FT-IR spectroscopic imaging system

    NASA Astrophysics Data System (ADS)

    Wright, N. A.; Crocombe, R. A.; Drapcho, D. L.; McCarthy, W. J.

    1998-06-01

    An integrated FT-IR spectroscopic imaging system is described. This consists of a step-scan FT-IR spectrometer, FT-IR microscope accessory and a 64×64 element MCT focal plane array, mounted on the microscope. Control of, and data acquisition from, both the spectrometer and the focal plane array is from a single PC. Typical data acquisition times for an 8 cm-1 resolution array are 1-4 minutes.

  12. Widely tunable (PbSn)Te lasers using etched cavities for mass production. [for infrared spectroscopic applications

    NASA Technical Reports Server (NTRS)

    Miller, M. D.

    1980-01-01

    Lead salt diode lasers are being used increasingly as tunable sources of monochromatic infrared radiation in a variety of spectroscopic systems. These devices are particularly useful, both in the laboratory and in the field, because of their high spectral brightness (compared to thermal sources) and wide spectral coverage (compared to line-tunable gas lasers). While the primary commercial application of these lasers has been for ultrahigh resolution laboratory spectroscopy, there are numerous systems applications, including laser absorbtion pollution monitors and laser heterodyne radiometers, for which diode lasers have great potential utility. Problem areas related to the wider use of these components are identified. Among these are total tuning range, mode control, and high fabrication cost. A fabrication technique which specifically addresses the problems of tuning range and cost, and which also has potential application for mode control, is reported.

  13. Ab initio molecular orbital and infrared spectroscopic study of the conformation of secondary amides: derivatives of formanilide, acetanilide and benzylamides

    NASA Astrophysics Data System (ADS)

    Ilieva, S.; Hadjieva, B.; Galabov, B.

    1999-09-01

    Ab initio molecular orbital calculations at HF/4-31G level and infrared spectroscopic data for the frequencies are applied to analyse the grouping in a series model aromatic secondary amides: formanilide; acetanilide; o-methylacetanilide; 2,6-dimethylformanilide, 2,6-dimethylacetanilide; N-benzylacetamide and N-benzylformamide. The theoretical and experimental data obtained show that the conformational state of the molecules studied is determined by the fine balance of several intramolecular factors: resonance effect between the amide group and the aromatic ring, steric interaction between various substituents around the -NH-CO- grouping in the aromatic ring, conjugation between the carbonyl bond and the nitrogen lone pair as well as direct field influences inside the amide group.

  14. Near Infrared photometric and spectroscopic observations of the bright optical transient J212444.87+321738.3

    NASA Astrophysics Data System (ADS)

    Mondal, Soumen; Das, Ramkrishna; Ashok, N. M.; Banerjee, D. P. K.; Dutta, Somnath; Ghosh, Supriyo; Mondal, Anindita

    2013-04-01

    We report near infrared JHK-band photometry and spectroscopic observations of the recently reported bright optical transient J212444.87+321738.3 using the Near-IR Imager cum spectrograph (NICMOS-3) installed on the Mount Abu 1.2-m telescope of the Physical Research Laboratory, India following the outburst announcement by Tiurina et al. in ATel #4888. The photometric observations were carried out on 2013 March 21.020 UT and 23.010 UT yielding magnitudes of J = 5.85 +/- 0.06, H = 4.47 +/- 0.06, K = 3.77 +/- 0.05; and J= 5.64 +/- 0.04, H= 4.48 +/- 0.04, K = 3.77 +/- 0.03 respectively.

  15. Infrared Spectroscopic Data from the Apache Point Observatory Galactic Evolution Experiment (APOGEE), SDSS-III Data Release 10

    DOE Data Explorer

    Sloan Digital Sky Survey (SDSS) Data Release 10 is the first spectroscopic release from the Apache Point Observatory Galactic Evolution Experiment (APOGEE), including spectra and derived stellar parameters for more than 50,000 stars. APOGEE is an ongoing survey of ~100,000 stars accessing all parts of the Milky Way. By operating in the infrared (H-band) portion of the electromagnetic spectrum, APOGEE is better able to detect light from stars lying in dusty regions of the Milky Way than surveys conducted in the optical, making this survey particularly well-suited for exploring the Galactic disk and bulge. APOGEE's high resolution spectra provide detailed information about the stellar atmospheres; DR10 provides derived effective temperatures, surface gravities, overall metallicities, and information on the abundances of several chemical elements. [copied from http://www.sdss3.org/dr10/irspec/

  16. Micro-Attenuated Total Reflection Fourier Transform Infrared (Micro ATR FT-IR) Spectroscopic Imaging with Variable Angles of Incidence.

    PubMed

    Wrobel, Tomasz P; Vichi, Alessandra; Baranska, Malgorzata; Kazarian, Sergei G

    2015-10-01

    The control of the angle of incidence in attenuated total reflection (ATR) Fourier transform infrared (FT-IR) spectroscopy allows for the probing of the sample at different depths of penetration of the evanescent wave. This approach has been recently coupled with macro-imaging capability using a diamond ATR accessory. In this paper, the design of optical apertures for the micro-germanium (Ge) ATR objective is presented for an FT-IR spectroscopic imaging microscope, allowing measurements with different angles of incidence. This approach provides the possibility of three-dimensional (3D) profiling in micro-ATR FT-IR imaging mode. The proof of principle results for measurements of polymer laminate samples at different angles of incidence confirm that controlling the depth of penetration is possible using a Ge ATR objective with added apertures.

  17. Infrared and Raman Spectroscopic Studies of the Antimicrobial Effects of Garlic Concentrates and Diallyl Constituents on Foodborne Pathogens

    PubMed Central

    Lu, Xiaonan; Rasco, Barbara A.; Kang, Dong-Hyun; Jabal, Jamie M.F.; Aston, D. Eric; Konkel, Michael E.

    2012-01-01

    The antimicrobial effects of garlic (Allium sativum) extract (25, 50, 75, 100, and 200 μl/ml) and diallyl sulfide (5, 10 and 20 μM) on Listeria monocytogenes and Escherichia coli O157:H7 cultivated in tryptic soy broth at 4, 22 and 35°C for up to 7 days were investigated. L. monocytogenes was more resistant to garlic extract and diallyl compounds treatment than E. coli O157:H7. Fourier transform Infrared (FT-IR) spectroscopy indicated that diallyl constituents contributed more to the antimicrobial effect than phenolic compounds. This effect was verified by Raman spectroscopy and Raman mapping on single bacteria. Scanning electron microscope (SEM) and transmission electron microscope (TEM) showed cell membrane damage consistent with spectroscopic observation. The degree of bacterial cell injury could be quantified using chemometric methods. PMID:21553849

  18. Infrared Spectroscopic Evidences of Strong Electronic Correlations in (Sr1−xLax)3Ir2O7

    PubMed Central

    Ahn, Gihyeon; Song, S. J.; Hogan, T.; Wilson, S. D.; Moon, S. J.

    2016-01-01

    We report on infrared spectroscopic studies of the electronic response of the (Sr1−xLax)3Ir2O7 system. Our experiments revealed hallmarks of strong electronic correlations in the evolution of the electronic response across the filling-controlled insulator-metal transition. We observed a collapse of the Jeff = 1/2 Mott gap accompanying the transfer of the spectral weight from the high-energy region to the gap region with electron doping. The intraband conductivity at the metallic side of the transition was found to consist of coherent Drude-like and incoherent responses. The sum rule and the extended Drude model analyses further indicated a large mass enhancement. Our results demonstrate a critical role of the electronic correlations in the charge dynamics of the (Sr1−xLax)3Ir2O7 system. PMID:27599573

  19. Spectroscopic pilot study in the near infrared of a sample of star-forming galaxies at z = 2

    NASA Astrophysics Data System (ADS)

    Gallego, J.; Sánchez de Miguel, A.; Zamorano, J.; Pérez-González, P. G.; Cardiel, N.; Barro, G.

    2011-11-01

    In this work we present the results of the spectroscopic analysis inthe near-infrared K band of a sample of 12 active star forminggalaxies at z ˜ 2. The sample was selected by using photometricredshifts, blue colors and large fluxes in the 24 μ m band ofMIPS/Spitzer. To analyze their physical properties we have computedtheir sizes, colors, stellar masses, extinctions and other parametersavailable in literature and in the "Rainbow" database. We computeHα luminosities and star formation rates for all galaxies atthat redshift. We were able to estimate metallicities from [NII]6584for a sub sample of the objects. In particular the dependence of the metallicitywith the stellar mass has been studied and compared with the results of other samples ofgalaxies at several redshifts. For a fixed mass, the metallicities ofour galaxies are compatible than those similar at the corresponding redshift, following the general trend of lower metallicities for higher redshifts.

  20. Mercury: Mid-infrared (7.3 - 13.5 microns) spectroscopic observations showing features characteristic of plagioclase

    NASA Technical Reports Server (NTRS)

    Kozlowski, R. W. H.; Sprague, A. L.; Witteborn, F. C.; Cruikshank, D. P.; Wooden, D.; Snyder, K. D.

    1994-01-01

    Mid-infrared spectroscopic observations of the surface of Mercury are reported for the wavelength range 7.3 to 13.5 microns. The observed spectral radiance emanated from equatorial and low latitude regions between 110-130 deg Mercurian longitude. The area is primarily an intercrater plain. The spectra show distinct and recognizable features, the principal Christiansen emission peak being the most prominent. The Christiansen feature strongly suggests the presence of plagioclase (Ca,Na)(Al,Si)AlSi2O8, (in particular labradorite: Ab(50) - Ab(30)). In addition we have studied the effects of thermal gradients to gain insight into the effects of thermal conditions on the spectral radiance of rock samples. This simulates the thermophysical effects as the rotating surface of Mercury is alternately heated and cooled. The spectral features of the samples are retained; however, the relative and absolute amplitudes vary as illustrated by laboratory reflectance and emittance spectra from quartzite.

  1. The water vapour continuum in near-infrared windows - Current understanding and prospects for its inclusion in spectroscopic databases

    NASA Astrophysics Data System (ADS)

    Shine, Keith P.; Campargue, Alain; Mondelain, Didier; McPheat, Robert A.; Ptashnik, Igor V.; Weidmann, Damien

    2016-09-01

    Spectroscopic catalogues, such as GEISA and HITRAN, do not yet include information on the water vapour continuum that pervades visible, infrared and microwave spectral regions. This is partly because, in some spectral regions, there are rather few laboratory measurements in conditions close to those in the Earth's atmosphere; hence understanding of the characteristics of the continuum absorption is still emerging. This is particularly so in the near-infrared and visible, where there has been renewed interest and activity in recent years. In this paper we present a critical review focusing on recent laboratory measurements in two near-infrared window regions (centred on 4700 and 6300 cm-1) and include reference to the window centred on 2600 cm-1 where more measurements have been reported. The rather few available measurements, have used Fourier transform spectroscopy (FTS), cavity ring down spectroscopy, optical-feedback - cavity enhanced laser spectroscopy and, in very narrow regions, calorimetric interferometry. These systems have different advantages and disadvantages. Fourier Transform Spectroscopy can measure the continuum across both these and neighbouring windows; by contrast, the cavity laser techniques are limited to fewer wavenumbers, but have a much higher inherent sensitivity. The available results present a diverse view of the characteristics of continuum absorption, with differences in continuum strength exceeding a factor of 10 in the cores of these windows. In individual windows, the temperature dependence of the water vapour self-continuum differs significantly in the few sets of measurements that allow an analysis. The available data also indicate that the temperature dependence differs significantly between different near-infrared windows. These pioneering measurements provide an impetus for further measurements. Improvements and/or extensions in existing techniques would aid progress to a full characterisation of the continuum - as an example, we

  2. Preliminary evaluation of hydrocarbon removal power of Caulerpa racemosa in seawater by means of infrared and visible spectroscopic measurements.

    PubMed

    Pietroletti, Marco; Capobianchi, Alfredo; Ragosta, Emanuela; Mecozzi, Mauro

    2010-10-15

    In this paper we tested the power of Caulerpa racemosa for removal hydrocarbons from seawater. C. racemosa was implanted in two aquariums filled with natural seawater having a hydrocarbon content lower than 0.05mg/L which is the detection limit of the FTIR spectrophotometric method used for the determination. One aquarium was submitted to sequential additions of hydrocarbons (n-esadecane 10, 20 and 40mg/L, n-docosane 15mg/L) and diesel fuels (20mg/L) while the second one remained uncontaminated and used as control. After any addition, hydrocarbon content in seawater was determined at regular time intervals (one or two days) and when comparable hydrocarbon contents (i.e. lower than 0.05mg/L) were again observed, the real removal power of hydrocarbons was verified by several spectroscopic measurements performed on algae from both aquariums. Total hydrocarbon contents in algae determined by infrared (FTIR) spectroscopy, always resulted higher in the polluted aquarium for all the concentrations of added pollutants. Further FTIR studies performed on algae showed the presence of marked quantitative and structural molecular modifications involving carbohydrates, proteins, lipids, nucleic acids and chlorophyll pigments in C. racemosa from the aquarium test. In addition, visible (VIS) spectroscopic examination of C. racemosa showed a reduction of chlorophyll pigments in the polluted aquarium with respect to the control one. At last, FTIR spectra all the algal samples submitted to hydrocarbon pollution were re-examined by means of two-dimensional correlation analysis, a statistical tool helpful for studying the dynamic evolution of any molecular and biological system submitted to an external perturbation producing compositional and structural changes. This approach showed differences among the molecular modifications caused by any type of hydrocarbon used, modifications related reasonably to the molecular dimensions and concentration of the added pollutants. All these

  3. Preliminary evaluation of hydrocarbon removal power of Caulerpa racemosa in seawater by means of infrared and visible spectroscopic measurements

    NASA Astrophysics Data System (ADS)

    Pietroletti, Marco; Capobianchi, Alfredo; Ragosta, Emanuela; Mecozzi, Mauro

    2010-10-01

    In this paper we tested the power of Caulerpa racemosa for removal hydrocarbons from seawater. C. racemosa was implanted in two aquariums filled with natural seawater having a hydrocarbon content lower than 0.05 mg/L which is the detection limit of the FTIR spectrophotometric method used for the determination. One aquarium was submitted to sequential additions of hydrocarbons (n-esadecane 10, 20 and 40 mg/L, n-docosane 15 mg/L) and diesel fuels (20 mg/L) while the second one remained uncontaminated and used as control. After any addition, hydrocarbon content in seawater was determined at regular time intervals (one or two days) and when comparable hydrocarbon contents (i.e. lower than 0.05 mg/L) were again observed, the real removal power of hydrocarbons was verified by several spectroscopic measurements performed on algae from both aquariums. Total hydrocarbon contents in algae determined by infrared (FTIR) spectroscopy, always resulted higher in the polluted aquarium for all the concentrations of added pollutants. Further FTIR studies performed on algae showed the presence of marked quantitative and structural molecular modifications involving carbohydrates, proteins, lipids, nucleic acids and chlorophyll pigments in C. racemosa from the aquarium test. In addition, visible (VIS) spectroscopic examination of C. racemosa showed a reduction of chlorophyll pigments in the polluted aquarium with respect to the control one. At last, FTIR spectra all the algal samples submitted to hydrocarbon pollution were re-examined by means of two-dimensional correlation analysis, a statistical tool helpful for studying the dynamic evolution of any molecular and biological system submitted to an external perturbation producing compositional and structural changes. This approach showed differences among the molecular modifications caused by any type of hydrocarbon used, modifications related reasonably to the molecular dimensions and concentration of the added pollutants. All these

  4. Near-Infrared Spectroscopic Investigation of Neptune's Hazes and Storms at the Keck Telescope

    NASA Astrophysics Data System (ADS)

    Roe, H.; Graham, J. R.; de Pater, I.; Gibbard, S.; Macintosh, B.; Max, C.; Baines, K.; Gilbert, A. M.; McLean, I. S.; Becklin, E. E.; Figer, D. F.; Larkin, J. E.; Levenson, N. A.; Teplitz, H. I.; Wilcox, M. K.; NIRSPEC Team

    1999-09-01

    We present observations of Neptune in the near-infrared (1-5 mu m) obtained with the newly commissioned Near-Infrared Spectrometer (NIRSPEC) at the 10-m W.M. Keck Telescope. The infrared spectrum of Neptune is useful for determining the structure and nature of haze layers and bright 'storm' features in the stratosphere and upper troposphere. Significant variations in atmospheric opacity due to methane and H_2 pressure-induced absorption as a function of wavelength allow selective probing of the atmosphere to different depths. Most infrared filters used in imaging cover too wide a spectral range to precisely determine the vertical distribution of hazes and 'storm' particles. Our observations provide both the spatial resolution necessary to separate infrared bright 'storm' features from Neptune's background hazy atmosphere as well as the spectral resolution (R=2000 low-resolution mode, R=25000 high-resolution mode) to selectively probe the atmosphere as a function of altitude. We compare our observed spectra with radiative transfer models to derive haze and 'storm' particle number density and their vertical distribution.

  5. Mid-infrared spectroscopic measurement of ionic dissociative materials in the metabolic pathway.

    PubMed

    Nakanishi, Kenichi; Hashimoto, Atsushi; Pan, Tao; Kanou, Mikihito; Kameoka, Takaharu

    2003-12-01

    We determine the pH dependency of the mid-infrared spectra in aqueous solution of the organic dissociative materials in the metabolic pathway: saccharide phosphates (G6P, F6P), adenosine, and its phosphates (ATP, ADP, AMP). The series of molar absorbance spectra for these reagents were obtained in a pH range of about 2 to 11 with a Fourier transform infrared (FT-IR) spectrometer equipped with a horizontal diamond attenuated total reflection (ATR) sampling accessory. We also provide a method of infrared spectral extraction of ionic dissociative materials by performing a linear least-square fitting utilizing the formulas of ionic dissociation equilibrium shift, and we obtain the infrared spectrum of each ionic species of the dissociative materials: G6P-, G6P2-; F6P-, F6P2-; ATP2-, ATP3-, ATP4-; ADP-, ADP2-, ADP3-; AMP, AMP-, AMP2-; and adenosine+, adenosine0. The infrared spectral structure of each ionic species of the dissociative materials in the metabolic pathway are discussed. Additionally, the possibility for a quantification system of the concentrations of the organic dissociative materials in varying pH is suggested.

  6. Continuous statistical modelling for rapid detection of adulteration of extra virgin olive oil using mid infrared and Raman spectroscopic data.

    PubMed

    Georgouli, Konstantia; Martinez Del Rincon, Jesus; Koidis, Anastasios

    2017-02-15

    The main objective of this work was to develop a novel dimensionality reduction technique as a part of an integrated pattern recognition solution capable of identifying adulterants such as hazelnut oil in extra virgin olive oil at low percentages based on spectroscopic chemical fingerprints. A novel Continuous Locality Preserving Projections (CLPP) technique is proposed which allows the modelling of the continuous nature of the produced in-house admixtures as data series instead of discrete points. The maintenance of the continuous structure of the data manifold enables the better visualisation of this examined classification problem and facilitates the more accurate utilisation of the manifold for detecting the adulterants. The performance of the proposed technique is validated with two different spectroscopic techniques (Raman and Fourier transform infrared, FT-IR). In all cases studied, CLPP accompanied by k-Nearest Neighbors (kNN) algorithm was found to outperform any other state-of-the-art pattern recognition techniques. Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. A four class model for digital breast histopathology using high-definition Fourier transform infrared (FT-IR) spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Mittal, Shachi; Wrobel, Tomasz P.; Leslie, L. S.; Kadjacsy-Balla, Andre; Bhargava, Rohit

    2016-03-01

    High-definition (HD) Fourier transform infrared (FT-IR) spectroscopic imaging is an emerging technique that not only enables chemistry-based visualization of tissue constituents, and label free extraction of biochemical information but its higher spatial detail makes it a potentially useful platform to conduct digital pathology. This methodology, along with fast and efficient data analysis, can enable both quantitative and automated pathology. Here we demonstrate a combination of HD FT-IR spectroscopic imaging of breast tissue microarrays (TMAs) with data analysis algorithms to perform histologic analysis. The samples comprise four tissue states, namely hyperplasia, dysplasia, cancerous and normal. We identify various cell types which would act as biomarkers for breast cancer detection and differentiate between them using statistical pattern recognition tools i.e. Random Forest (RF) and Bayesian algorithms. Feature optimization is integrally carried out for the RF algorithm, reducing computation time as well as redundant spectral features. We achieved an order of magnitude reduction in the number of features with comparable prediction accuracy to that of the original feature set. Together, the demonstration of histology and selection of features paves the way for future applications in more complex models and rapid data acquisition.

  8. Infrared LED Enhanced Spectroscopic CdZnTe Detector Working under High Fluxes of X-rays.

    PubMed

    Pekárek, Jakub; Dědič, Václav; Franc, Jan; Belas, Eduard; Rejhon, Martin; Moravec, Pavel; Touš, Jan; Voltr, Josef

    2016-09-27

    This paper describes an application of infrared light-induced de-polarization applied on a polarized CdZnTe detector working under high radiation fluxes. We newly demonstrate the influence of a high flux of X-rays and simultaneous 1200-nm LED illumination on the spectroscopic properties of a CdZnTe detector. CdZnTe detectors operating under high radiation fluxes usually suffer from the polarization effect, which occurs due to a screening of the internal electric field by a positive space charge caused by photogenerated holes trapped at a deep level. Polarization results in the degradation of detector charge collection efficiency. We studied the spectroscopic behavior of CdZnTe under various X-ray fluxes ranging between 5 × 10 5 and 8 × 10 6 photons per mm 2 per second. It was observed that polarization occurs at an X-ray flux higher than 3 × 10 6 mm - 2 ·s - 1 . Using simultaneous illumination of the detector by a de-polarizing LED at 1200 nm, it was possible to recover X-ray spectra originally deformed by the polarization effect.

  9. Infrared LED Enhanced Spectroscopic CdZnTe Detector Working under High Fluxes of X-rays

    PubMed Central

    Pekárek, Jakub; Dědič, Václav; Franc, Jan; Belas, Eduard; Rejhon, Martin; Moravec, Pavel; Touš, Jan; Voltr, Josef

    2016-01-01

    This paper describes an application of infrared light-induced de-polarization applied on a polarized CdZnTe detector working under high radiation fluxes. We newly demonstrate the influence of a high flux of X-rays and simultaneous 1200-nm LED illumination on the spectroscopic properties of a CdZnTe detector. CdZnTe detectors operating under high radiation fluxes usually suffer from the polarization effect, which occurs due to a screening of the internal electric field by a positive space charge caused by photogenerated holes trapped at a deep level. Polarization results in the degradation of detector charge collection efficiency. We studied the spectroscopic behavior of CdZnTe under various X-ray fluxes ranging between 5×105 and 8×106 photons per mm2 per second. It was observed that polarization occurs at an X-ray flux higher than 3×106 mm−2·s−1. Using simultaneous illumination of the detector by a de-polarizing LED at 1200 nm, it was possible to recover X-ray spectra originally deformed by the polarization effect. PMID:27690024

  10. FAR-IR/SUBMILLIMETER SPECTROSCOPIC COSMOLOGICAL SURVEYS: PREDICTIONS OF INFRARED LINE LUMINOSITY FUNCTIONS FOR z < 4 GALAXIES

    SciTech Connect

    Spinoglio, Luigi; Dasyra, Kalliopi M.; Gruppioni, Carlotta; Valiante, Elisabetta; Isaak, Kate

    2012-02-01

    Star formation and accretion onto supermassive black holes in the nuclei of galaxies are the two most energetic processes in the universe, producing the bulk of the observed emission throughout its history. We simulated the luminosity functions of star-forming and active galaxies for spectral lines that are thought to be good spectroscopic tracers of either phenomenon, as a function of redshift. We focused on the infrared (IR) and submillimeter domains, where the effects of dust obscuration are minimal. Using three different and independent theoretical models for galaxy formation and evolution, constrained by multi-wavelength luminosity functions, we computed the number of star-forming and active galaxies per IR luminosity and redshift bin. We converted the continuum luminosity counts into spectral line counts using relationships that we calibrated on mid- and far-IR spectroscopic surveys of galaxies in the local universe. Our results demonstrate that future facilities optimized for survey-mode observations, i.e., the Space Infrared telescope for Cosmology and Astrophysics and the Cerro Chajnantor Atacama Telescope, will be able to observe thousands of z > 1 galaxies in key fine-structure lines, e.g., [Si II], [O I], [O III], [C II], in a half-square-degree survey, with 1 hr integration time per field of view. Fainter lines such as [O IV], [Ne V], and H{sub 2} (0-0)S1 will be observed in several tens of bright galaxies at 1 < z < 2, while diagnostic diagrams of active nucleus versus star formation activity will be feasible even for normal z {approx} 1 galaxies. We discuss the new parameter space that these future telescopes will cover and that strongly motivates their construction.

  11. Development of Single-Seed Near-Infrared Spectroscopic Predictions of Corn and Soybeans Constituents Using Bulk Teference Values and Mean Spectra

    USDA-ARS?s Scientific Manuscript database

    Near-Infrared reflectance spectroscopic prediction models were developed for common constituents of corn and soybeans using bulk reference values and mean spectra from single-seeds. The bulk reference model and a true single-seed model for soybean protein were compared to determine how well the bul...

  12. Analysis of Molecular Contamination on Genesis Collectors Through Spectroscopic Ellipsometry

    NASA Technical Reports Server (NTRS)

    McNamara, K. M.; Stansbery, Eileen K.

    2005-01-01

    Before the spacecraft returned to Earth in September, the Genesis mission had a preliminary assessment plan in place for the purpose of providing information on the condition and availability of collector materials to the science community as a basis for allocation requests. One important component of that plan was the evaluation of collector surfaces for molecular contamination. Sources of molecular contamination might be the on-orbit outgassing of spacecraft and science canister components, the condensation of thruster by-products during spacecraft maneuvers, or the condensation of volatile species associated with reentry. Although the non-nominal return of the Genesis spacecraft introduced particulate contamination to the collectors, such as dust and heatshield carbon-carbon, it is unlikely to have caused any molecular deposition. The contingency team's quick action in returning the damaged payload the UTTR cleanroom by 6 PM the evening of recovery help to ensure that exposure to weather conditions and the environment were kept to a minimum.

  13. Microsampling techniques for infrared spectroscopic analysis of lunar and terrestrial minerals

    NASA Technical Reports Server (NTRS)

    Estep, P. A.; Kovach, J. J.; Karr, C.

    1973-01-01

    Microsampling techniques have been developed for infrared analysis of single mineral grains from lunar rocks and dusts, allowing a detailed molecular structure characterization of these complex fine-grained samples. The methods include special devices for isolating single grains, preparing micropellets from the grains, and obtaining in situ microspecular reflectance spectra from grains in polished rock samples. Although specifically developed for the work on lunar samples, the special techniques for single grain infrared analysis were found to be equally useful in studies of complex terrestrial mineral samples. For example, infrared microanalysis has contributed substantially in solving problems concerned with our natural resources, such as the structural characterization of minerals from commercial iron ores, marine deposits, coal, and fly ash derived from coal.

  14. Design and spectroscopic characterization of novel series of near infrared indocyanine dyes

    NASA Astrophysics Data System (ADS)

    Abd-El-Aziz, Alaa S.; Strohm, Elizabeth A.; Okasha, Rawda M.

    2015-07-01

    A novel series of near infrared heptamethine indocyanine dyes bearing various aromatic chromophores has been synthesized. The synthetic methodology was achieved via ester condensation reactions of heptamethine indocyanine parent dye with carboxylic moiety and aromatic compounds such as anthracene, pyrene and thiophene derivatives. Structural analysis of the newly prepared dyes was accomplished using one- and two-dimensional nuclear magnetic resonance, infrared spectroscopy and electrospray ionization mass spectrometry. These dyes exhibited high molar absorptivity based on the UV-visible/near-infrared spectral data. Fluorescence emission spectral data was used to determine the relative quantum yield. The new dyes displayed formation of H-aggregates in water at low concentrations, while this behavior was not observed in methanol.

  15. [Infrared spectroscopic studies of the effect of hydrotalcite on the capability of agricultural film].

    PubMed

    Wang, Liang-yu; Cui, Hai-long; Jiao, Hong-wen

    2007-02-01

    Different kinds of hydrotalcite and their effects on the optic capability, transmittance, infrared anti-transmittance and heat preservation of agriculture film were studied by IR spectroscopy. It was found that the haze degree of the film decreased about 1.5% because the diameter of the hydrotalcite made in Dalian was bigger than those made in Japan. Compared to the french chalk, the hydrotalcite had much better capability of infrared anti-transmittance. But from the spectra of hydrotalcite, whichever made in Dalian or in Japan, there was no infrared absorption in the region of 1100-1200 cm(-1). Compared with the wavelength of 9-11 microm, the absorbance band at 1360 cm(-1) had a little shift. Hence, the capability of heat preservation of hydrotalcite-added agriculture film would be studied in the future work.

  16. Microsampling techniques for infrared spectroscopic analysis of lunar and terrestrial minerals

    NASA Technical Reports Server (NTRS)

    Estep, P. A.; Kovach, J. J.; Karr, C.

    1973-01-01

    Microsampling techniques have been developed for infrared analysis of single mineral grains from lunar rocks and dusts, allowing a detailed molecular structure characterization of these complex fine-grained samples. The methods include special devices for isolating single grains, preparing micropellets from the grains, and obtaining in situ microspecular reflectance spectra from grains in polished rock samples. Although specifically developed for the work on lunar samples, the special techniques for single grain infrared analysis were found to be equally useful in studies of complex terrestrial mineral samples. For example, infrared microanalysis has contributed substantially in solving problems concerned with our natural resources, such as the structural characterization of minerals from commercial iron ores, marine deposits, coal, and fly ash derived from coal.

  17. A time-resolved infrared vibrational spectroscopic study of the photo-dynamics of crystalline materials.

    PubMed

    Towrie, Mike; Parker, Anthony W; Ronayne, Kate L; Bowes, Katharine F; Cole, Jacqueline M; Raithby, Paul R; Warren, John E

    2009-01-01

    Time-resolved infrared vibrational spectroscopy is a structurally sensitive probe of the excited-state properties of matter. The technique has found many applications in the study of molecules in dilute solution phase but has rarely been applied to crystalline samples. We report on the use of a sensitive pump-probe time-resolved infrared spectrometer and sample handling techniques for studies of the ultrafast excited-state dynamics of crystalline materials. The charge transfer excited states of crystalline metal carbonyls and the proton transfer of dihydroxyquinones are presented and compared with the solution phase.

  18. Do Infants Recognize the Arcimboldo Images as Faces? Behavioral and Near-Infrared Spectroscopic Study

    ERIC Educational Resources Information Center

    Kobayashi, Megumi; Otsuka, Yumiko; Nakato, Emi; Kanazawa, So; Yamaguchi, Masami K.; Kakigi, Ryusuke

    2012-01-01

    Arcimboldo images induce the perception of faces when shown upright despite the fact that only nonfacial objects such as vegetables and fruits are painted. In the current study, we examined whether infants recognize a face in the Arcimboldo images by using the preferential looking technique and near-infrared spectroscopy (NIRS). In the first…

  19. Infrared spectroscopic studies of dimethylglyoxime chelates of nickel, cobalt, copper, palladium and platinum

    NASA Astrophysics Data System (ADS)

    Panja, Prabhat K.; Bala, Sibsankar; Pal, Chadramadhab; Ghosh, Pradip N.

    1991-09-01

    Infrared spectra of dimethylglyoxime chelates of nickel, cobalt, copper, palladium and platinum are measured in the range 4000-200 cm -1. The shifts of the OH stretching frequencies caused by chelation provide information on hydrogen bonding. The frequency shifts and hydrogen bond distances are calculated from the Lippincott—Schroeder potential using X-ray crystallographic data and compared with the observed values.

  20. Do Infants Recognize the Arcimboldo Images as Faces? Behavioral and Near-Infrared Spectroscopic Study

    ERIC Educational Resources Information Center

    Kobayashi, Megumi; Otsuka, Yumiko; Nakato, Emi; Kanazawa, So; Yamaguchi, Masami K.; Kakigi, Ryusuke

    2012-01-01

    Arcimboldo images induce the perception of faces when shown upright despite the fact that only nonfacial objects such as vegetables and fruits are painted. In the current study, we examined whether infants recognize a face in the Arcimboldo images by using the preferential looking technique and near-infrared spectroscopy (NIRS). In the first…

  1. Mid-Infrared Spectroscopic Properties of Humic Acid and Fulvic Acid-Soil Mixtures.

    USDA-ARS?s Scientific Manuscript database

    The detection of humic materials in soils is essential in order to determine organic matter (SOM) stability and C sequestration on agricultural land. Mid-Infrared (MidIR) spectroscopy has been used to characterize SOM quality [1], study extracted soil humic acids [2], develop calibrations for quanti...

  2. Mid-Infrared Spectroscopic Properties of Humic Acid and Fulvic Acid-Soil Mixtures

    USDA-ARS?s Scientific Manuscript database

    The detection of humic materials in soils is essential in order to determine organic matter (SOM) stability and C sequestration on agricultural land. Mid-Infrared (MidIR) spectroscopy has been used to characterize SOM quality [1], study extracted soil humic acids [2], develop calibrations for quanti...

  3. Matrix isolation infrared spectroscopic and theoretical study of 1,1,1-trifluoro-2-chloroethane (HCFC-133a)

    SciTech Connect

    Rodrigues, Gessenildo Pereira; Ventura, Elizete E-mail: rfausto@ci.uc.pt; Andrade do Monte, Silmar; Lucena, Juracy Régis; Reva, Igor; Fausto, Rui E-mail: rfausto@ci.uc.pt

    2013-11-28

    The molecular structure and infrared spectrum of the atmospheric pollutant 1,1,1-trifluoro-2-chloroethane (HCFC-133a; CF{sub 3}CH{sub 2}Cl) in the ground electronic state were characterized experimentally and theoretically. Excited state calculations (at the CASSCF, MR-CISD, and MR-CISD+Q levels) have also been performed in the range up to ∼9.8 eV. The theoretical calculations show the existence of one (staggered) conformer, which has been identified spectroscopically for the monomeric compound isolated in cryogenic (∼10 K) argon and xenon matrices. The observed infrared spectra of the matrix-isolated HCFC-133a were interpreted with the aid of MP2/aug-cc-pVTZ calculations and normal coordinate analysis, which allowed a detailed assignment of the observed spectra to be carried out, including identification of bands due to different isotopologues ({sup 35}Cl and {sup 37}Cl containing molecules). The calculated energies of the several excited states along with the values of oscillator strengths and previous results obtained for CFCs and HCFCs suggest that the previously reported photolyses of the title compound at 147 and 123.6 nm [T. Ichimura, A. W. Kirk, and E. Tschuikow-Roux, J. Phys. Chem. 81, 1153 (1977)] are likely to be initiated in the n-4s and n-4p Rydberg states, respectively.

  4. Infrared and UV-visible spectroscopic studies of gamma-irradiated Sb2O3-B2O3 glasses

    NASA Astrophysics Data System (ADS)

    Marzouk, Samir Y.; Elbatal, Fatma H.

    2014-04-01

    Glasses from the binary Sb2O3-B2O3 system were prepared in the compositional range 90-30 Sb2O3 mol%. UV-visible spectroscopic measurements were carried out in the range 190-1100 nm before and after successive gamma rays irradiation (1, 3, 4 Mrad). Infrared absorption of the samples was measured by the KBr technique in the range 4000-400 cm-1 and the same measurements were repeated after gamma irradiation with 4 kGy. Experimental results indicate that antimony borate glasses reveal quite shielding behavior towards gamma rays irradiation as observed with heavy metal cations bearing glasses such as Bi3+ and Pb2+. Infrared absorption spectra reveal characteristic absorption bands specific for the glass-forming borate units and Sb-O units. Glasses containing high antimony oxide content can thus be recommended as promising radiation-shielding material because they show resistant to gamma irradiation due to the presence of high percent of heavy metal oxide (Sb2O3).

  5. Sculpting narrowband Fano resonances inherent in the large-area mid-infrared photonic crystal microresonators for spectroscopic imaging

    PubMed Central

    Liu, Jui-Nung; Schulmerich, Matthew V.; Bhargava, Rohit; Cunningham, Brian T.

    2014-01-01

    Fourier transform infrared (FT-IR) imaging spectrometers are almost universally used to record microspectroscopic imaging data in the mid-infrared (mid-IR) spectral region. While the commercial standard, interferometry necessitates collection of large spectral regions, requires a large data handling overhead for microscopic imaging and is slow. Here we demonstrate an approach for mid-IR spectroscopic imaging at selected discrete wavelengths using narrowband resonant filtering of a broadband thermal source, enabled by high-performance guided-mode Fano resonances in one-layer, large-area mid-IR photonic crystals on a glass substrate. The microresonant devices enable discrete frequency IR (DF-IR), in which a limited number of wavelengths that are of interest are recorded using a mechanically robust instrument. This considerably simplifies instrumentation as well as overhead of data acquisition, storage and analysis for large format imaging with array detectors. To demonstrate the approach, we perform DF-IR spectral imaging of a polymer USAF resolution target and human tissue in the C−H stretching region (2600−3300 cm−1). DF-IR spectroscopy and imaging can be generalized to other IR spectral regions and can serve as an analytical tool for environmental and biomedical applications. PMID:25089433

  6. Evaluating the health of compromised tissues using a near-infrared spectroscopic imaging system in clinical settings: lessons learned

    NASA Astrophysics Data System (ADS)

    Leonardi, Lorenzo; Sowa, Michael G.; Hewko, Mark D.; Schattka, Bernhard J.; Payette, Jeri R.; Hastings, Michelle; Posthumus, Trevor B.; Mantsch, Henry H.

    2003-07-01

    The present and accepted standard for determining the status of tissue relies on visual inspection of the tissue. Based on the surface appearance of the tissue, medical personnel will make an assessment of the tissue and proceed to a course of action or treatment. Visual inspection of tissue is central to many areas of clinical medicine, and remains a cornerstone of dermatology, reconstructive plastic surgery, and in the management of chronic wounds, and burn injuries. Near infrared spectroscopic imaging holds the promise of being able to monitor the dynamics of tissue physiology in real-time and detect pathology in living tissue. The continuous measurement of metabolic, physiological, or structural changes in tissue is of primary concern in many clinical and biomedical domains. A near infrared hyperspectral imaging system was constructed for the assessment of burn injuries and skin flaps or skin grafts. This device merged basic science with engineering and integrated manufacturing to develop a device suitable to detect ischemic tissue. This device has the potential of providing measures of tissue physiology, oxygen delivery and tissue hydration during patient screening, in the operating room or during therapy and post-operative/treatment monitoring. Results from a pre-clinical burn injury study will be presented.

  7. Infrared and Raman spectroscopic studies of structural variations in minerals from Apollo 11, 12, 14 and 15 samples, volume 3

    NASA Technical Reports Server (NTRS)

    Estep, P. A.; Kovach, J. J.; Waldstein, P.; Karr, C., Jr.

    1972-01-01

    Infrared and Raman vibrational spectroscopic data, yielding direct information on molecular structure, were obtained for single grains ( 150 microns) of minerals, basalts, and glasses isolated from Apollo 11, 12, 14, and 15 rock and dust samples, and for grains in Apollo 14 polished butt samples. From the vibrational data, specification substitutions were determined for the predominant silicate minerals of plagioclase, pyroxene, and olivine. Unique spectral variations for grains of K-feldspar, orthopyroxene, pyroxenoid, and ilmenite were observed to exceed the ranges of terrestrial samples, and these variations may be correlatable with formation histories. Alpha-quartz was isolated as pure single grains, in granitic grains composited with sanidine, and in unique grains that were intimately mixed with varying amounts of glass. Accessory minerals of chromite and ulvospinel were isolated as pure grains and structurally characterized from their distinctive infrared spectra. Fundamental vibrations of the SiO4 tetrahedra in silicate minerals were used to classify bulk compositions in dust sieved fractions, basalt grains and glass particles, and to compare modal characteristics for maria, highland and rille samples. No hydrated minerals were found in any of the samples studied, indicating anhydrous formation conditions.

  8. In situ permeation study of drug through the stratum corneum using attenuated total reflection Fourier transform infrared spectroscopic imaging

    NASA Astrophysics Data System (ADS)

    Andanson, Jean-Michel; Hadgraft, Jonathan; Kazarian, Sergei G.

    2009-05-01

    Infrared (IR) spectroscopy is one of the most chemically specific analytical methods that gives information about composition, structure, and interactions in a material. IR spectroscopy has been successfully applied to study the permeation of xenobiotics through the skin. Combining IR spectroscopy with an IR array detector led to the development of Fourier transform infrared (FTIR) spectroscopic imaging, which generates chemical information from different areas of a sample at the microscopic level. This is particularly important for heterogeneous samples, such as skin. Attenuated total reflection (ATR)-FTIR imaging has been applied to measure, in situ, the diffusion of benzyl nicotinate (BN) through the outer layer of human skin [stratum corneum (SC)]. In vitro experiments have demonstrated the heterogeneous distribution of SC surface lipids before the penetration of a saturated solution of BN. Image analysis demonstrated a strong correlation between the distribution of lipids and drugs, while ethanol appeared to be homogenously distributed in the SC. These results show the ability of ATR-FTIR imaging to measure simultaneously the affinities of drug and solvent to the lipid-rich and lipid-poor skin domains, respectively, during permeation. This information may be useful in better understanding drug-diffusion pathways through the SC.

  9. Spectroscopic investigation on cocrystal formation between adenine and fumaric acid based on infrared and Raman techniques.

    PubMed

    Du, Yong; Fang, Hong Xia; Zhang, Qi; Zhang, Hui Li; Hong, Zhi

    2016-01-15

    As an important component of double-stranded DNA, adenine has powerful hydrogen-bond capability, due to rich hydrogen bond donors and acceptors existing within its molecular structure. Therefore, it is easy to form cocrystal between adenine and other small molecules with intermolecular hydrogen-bond effect. In this work, cocrystal of adenine and fumaric acid has been characterized as model system by FT-IR and FT-Raman spectral techniques. The experimental results show that the cocrystal formed between adenine and fumaric acid possesses unique spectroscopical characteristic compared with that of starting materials. Density functional theory (DFT) calculation has been performed to optimize the molecular structures and simulate vibrational modes of adenine, fumaric acid and the corresponding cocrystal. Combining the theoretical and experimental vibrational results, the characteristic bands corresponding to bending and stretching vibrations of amino and carbonyl groups within cocrystal are shifted into lower frequencies upon cocrystal formation, and the corresponding bond lengths show some increase due to the effect of intermolecular hydrogen bonding. Different vibrational modes shown in the experimental spectra have been assigned based on the simulation DFT results. The study could provide experimental and theoretical benchmarks to characterize cocrystal formed between active ingredients and cocrystal formers and also the intermolecular hydrogen-bond effect within cocrystal formation process by vibrational spectroscopic techniques.

  10. Spectroscopic investigation on cocrystal formation between adenine and fumaric acid based on infrared and Raman techniques

    NASA Astrophysics Data System (ADS)

    Du, Yong; Fang, Hong Xia; Zhang, Qi; Zhang, Hui Li; Hong, Zhi

    2016-01-01

    As an important component of double-stranded DNA, adenine has powerful hydrogen-bond capability, due to rich hydrogen bond donors and acceptors existing within its molecular structure. Therefore, it is easy to form cocrystal between adenine and other small molecules with intermolecular hydrogen-bond effect. In this work, cocrystal of adenine and fumaric acid has been characterized as model system by FT-IR and FT-Raman spectral techniques. The experimental results show that the cocrystal formed between adenine and fumaric acid possesses unique spectroscopical characteristic compared with that of starting materials. Density functional theory (DFT) calculation has been performed to optimize the molecular structures and simulate vibrational modes of adenine, fumaric acid and the corresponding cocrystal. Combining the theoretical and experimental vibrational results, the characteristic bands corresponding to bending and stretching vibrations of amino and carbonyl groups within cocrystal are shifted into lower frequencies upon cocrystal formation, and the corresponding bond lengths show some increase due to the effect of intermolecular hydrogen bonding. Different vibrational modes shown in the experimental spectra have been assigned based on the simulation DFT results. The study could provide experimental and theoretical benchmarks to characterize cocrystal formed between active ingredients and cocrystal formers and also the intermolecular hydrogen-bond effect within cocrystal formation process by vibrational spectroscopic techniques.

  11. Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopic analysis of regenerated bone

    NASA Astrophysics Data System (ADS)

    Benetti, Carolina; Kazarain, Sergei G.; Alves, Marco A. V.; Blay, Alberto; Correa, Luciana; Zezell, Denise M.

    2014-03-01

    The cutting of bone is routinely required in medical procedures, especially in dental applications. In such cases, bone regeneration and new bone quality can determine the success of the treatment. This study investigated the main spectral differences of undamaged and healed bone using the ATR-FTIR spectroscopy technique. Three rabbits were submitted to a surgical procedure; a small piece of bone (3x3 mm2) was removed from both sides of their jaws using a high speed drill. After 15 days, the rabbits were euthanized and the jaws were removed. A bone slice was cut from each side of the jaw containing regions of undamaged and newly formed bone, resulting in six samples which were polished for spectroscopic comparison. The samples were analyzed by FTIR spectroscopy using a diamond ATR accessory. Spectral characteristics were compared and particular attention was paid to the proportion of phosphate to amide I bands and the width of the phosphate band. The results show that the ratio of phosphate to amide I is smaller in new bone tissue than in the undamaged bone, indicating a higher organic content in the newly formed bone. The analysis of the width of the phosphate band suggests a crystallinity difference between both tissues, since the width was higher in the new bone than in the natural bone. These results suggest that the differences observed in bone aging processes by FTIR spectroscopic can be applied to the study of healing processes.

  12. Calibration transfer in Fourier transform infrared remote sensing and in the near-infrared spectroscopic determination of clinical analytes

    NASA Astrophysics Data System (ADS)

    Koehler, Frederick William

    Of the many instrumental technologies provided by analytical chemistry, the chemical selectivity, sensitivity, and flexibility provided by Fourier transform infrared (FT-IR) spectrometry makes it a common choice in broad classes of applications requiring a fast, non-destructive sensing technique. Arising as a practical technology after the arrival of computers, the analysis of the complex digitized chemical information provided by FT-IR spectrometry remains intimately intertwined with computer-based techniques, beginning with the Fast Fourier Transform itself. Like many other modern analytical methods, FT-IR spectrometry is capable of producing tremendous quantities of data that often require complex analysis techniques. These techniques attempt to leverage data into information that can be used to make practical decisions. Techniques discussed in this work in the computer-based analysis of FT-IR data include digital signal processing, digital filtering, pattern recognition, multivariate calibration, and optimization. Whether in the automated qualitative determination of air pollutants in industrial stack monitoring, or a highly sensitive quantitative determination of clinical analytes, when applied to FT-IR data, these data analysis techniques seek the suppression of interfering signals and the extraction of analyte information, allowing these important applications to be realized. Techniques applied to FT-IR data are becoming more powerful in extracting the maximum amount of chemical information from the instrumental signal. Often, however, signals not related to the analyte such as background features, temperature information, and spectrometer-specific information become included in the multivariate models used in qualitative or quantitative prediction. These interferences can represent orders of magnitude more variation in the FT-IR data than the changes in the signal arising from the analytes of interest. If the model includes any of these kinds of information

  13. Infrared spectroscopic study on lattice dynamics in CaFeO3

    NASA Astrophysics Data System (ADS)

    Zhang, C. X.; Xia, H. L.; Liu, H.; Dai, Y. M.; Xu, B.; Yang, R.; Qiu, Z. Y.; Sui, Q. T.; Long, Y. W.; Meng, S.; Qiu, X. G.

    2017-02-01

    The change of the lattice dynamics upon the charge disproportionation (CD) transition has been investigated for the CaFeO3 crystal by measuring its infrared optical spectra. Across the CD transition, CaFeO3 undergoes a metal-insulator transition, and it is found that below TC D≈ 290 K the low-frequency optical conductivity gradually decreases to a rather low value and is dominated by a series of infrared-active phonons. Intriguingly, accompanied by the CD transition, two prominent phonon modes at ˜243 and ˜559 cm-1associated with the vibrations of Fe-O bonds show obvious redshift and asymmetric line shapes characterized by a Fano profile, suggesting a strong electron-phonon coupling. This coupling behavior reveals an intimate relationship between charge and lattice in the CD transition of CaFeO3.

  14. An infrared spectroscopic study of H-bond network in hyperbranched polyester polyol

    NASA Astrophysics Data System (ADS)

    Žagar, Ema; Grdadolnik, Jože

    2003-10-01

    A FTIR study of aliphatic hyperbranched polyester of the fourth generation Boltorn H40 (BH40) is presented. In order to properly assign the main vibrational bands in infrared spectrum temperature measurements, hydration and H/D exchange experiments were performed. Beside these experiments, difference spectroscopy, 2D generalized correlation infrared spectroscopy (2-DGCS) and band fitting procedure were employed to study the main interactions in polymer. On the basis of the detected interactions between various groups the structure of a H-bond network in hyperbranched polyester is proposed. Three main H-bond interactions were detected. Besides CO⋯HO and HO⋯HO a third type of H-bond is present (CO⋯HO⋯HO). A minor type of interactions represent the hydrogen bond formed with the carboxyl COOH group and impurities, which may be present in lower concentration.

  15. Infrared-faint radio sources are at high redshifts. Spectroscopic redshift determination of infrared-faint radio sources using the Very Large Telescope

    NASA Astrophysics Data System (ADS)

    Herzog, A.; Middelberg, E.; Norris, R. P.; Sharp, R.; Spitler, L. R.; Parker, Q. A.

    2014-07-01

    Context. Infrared-faint radio sources (IFRS) are characterised by relatively high radio flux densities and associated faint or even absent infrared and optical counterparts. The resulting extremely high radio-to-infrared flux density ratios up to several thousands were previously known only for high-redshift radio galaxies (HzRGs), suggesting a link between the two classes of object. However, the optical and infrared faintness of IFRS makes their study difficult. Prior to this work, no redshift was known for any IFRS in the Australia Telescope Large Area Survey (ATLAS) fields which would help to put IFRS in the context of other classes of object, especially of HzRGs. Aims: This work aims at measuring the first redshifts of IFRS in the ATLAS fields. Furthermore, we test the hypothesis that IFRS are similar to HzRGs, that they are higher-redshift or dust-obscured versions of these massive galaxies. Methods: A sample of IFRS was spectroscopically observed using the Focal Reducer and Low Dispersion Spectrograph 2 (FORS2) at the Very Large Telescope (VLT). The data were calibrated based on the Image Reduction and Analysis Facility (IRAF) and redshifts extracted from the final spectra, where possible. This information was then used to calculate rest-frame luminosities, and to perform the first spectral energy distribution modelling of IFRS based on redshifts. Results: We found redshifts of 1.84, 2.13, and 2.76, for three IFRS, confirming the suggested high-redshift character of this class of object. These redshifts and the resulting luminosities show IFRS to be similar to HzRGs, supporting our hypothesis. We found further evidence that fainter IFRS are at even higher redshifts. Conclusions: Considering the similarities between IFRS and HzRGs substantiated in this work, the detection of IFRS, which have a significantly higher sky density than HzRGs, increases the number of active galactic nuclei in the early universe and adds to the problems of explaining the formation of

  16. Matrix Infrared Spectroscopic and Computational Investigations of Novel Small Uranium Containing Molecules - Final Technical Report

    SciTech Connect

    Andrews, Lester

    2014-10-17

    Direct reactions of f-element uranium, thorium and lanthanide metal atoms were investigated with small molecules. These metal atoms were generated by laser ablation and mixed with the reagent molecules then condensed with noble gases at 4K. The products were analyzed by absorption of infrared light to measure vibrational frequencies which were confirmed by quantum chemical calculations. We have learned more about the reactivity of uranium atoms with common molecules, which will aid in the develolpment of further applications of uranium.

  17. [A review of mixed gas detection system based on infrared spectroscopic technique].

    PubMed

    Dang, Jing-Min; Fu, Li; Yan, Zi-Hui; Zheng, Chuan-Tao; Chang, Yu-Chun; Chen, Chen; Wang, Yi-Din

    2014-10-01

    In order to provide the experiences and references to the researchers who are working on infrared (IR) mixed gas detection field. The proposed manuscript reviews two sections of the aforementioned field, including optical multiplexing structure and detection method. At present, the coherent light sources whose representative are quantum cascade laser (QCL) and inter-band cascade laser(ICL) become the mainstream light source in IR mixed gas detection, which replace the traditional non-coherent light source, such as IR radiation source and IR light emitting diode. In addition, the photon detector which has a super high detectivity and very short response time is gradually beyond thermal infrared detector, dominant in the field of infrared detector. The optical multiplexing structure is the key factor of IR mixed gas detection system, which consists of single light source multi-plexing detection structure and multi light source multiplexing detection structure. Particularly, single light source multiplexing detection structure is advantages of small volume and high integration, which make it a plausible candidate for the portable mixed gas detection system; Meanwhile, multi light source multiplexing detection structure is embodiment of time division multiplex, frequency division multiplexing and wavelength division multiplexing, and become the leading structure of the mixed gas detection system because of its wider spectral range, higher spectral resolution, etc. The detection method applied to IR mixed gas detection includes non-dispersive infrared (NDIR) spectroscopy, wavelength and frequency-modulation spectroscopy, cavity-enhanced spectroscopy and photoacoustic spectroscopy, etc. The IR mixed gas detection system designed by researchers after recognizing the whole sections of the proposed system, which play a significant role in industrial and agricultural production, environmental monitoring, and life science, etc.

  18. Matrix isolation infrared spectroscopic study of 4-Pyridinecarboxaldehyde and of its UV-induced photochemistry

    NASA Astrophysics Data System (ADS)

    Cluyts, Liesel; Sharma, Archna; Kuş, Nihal; Schoone, Kristien; Fausto, Rui

    2017-01-01

    The structure, infrared spectrum, barrier to internal rotation, and photochemistry of 4-pyridinecarboxaldehyde (4PCA) were studied by low-temperature (10 K) matrix isolation infrared spectroscopy and quantum chemical calculations undertaken at both Moller-Plesset to second order (MP2) and density functional theory (DFT/B3LYP) levels of approximation. The molecule has a planar structure (Cs point group), with MP2/6-311 ++G(d,p) predicted internal rotation barrier of 26.6 kJ mol- 1, which is slightly smaller than that of benzaldehyde ( 30 kJ mol- 1), thus indicating a less important electron charge delocalization from the aromatic ring to the aldehyde moiety in 4PCA than in benzaldehyde. A complete assignment of the infrared spectrum of 4PCA isolated in an argon matrix has been done for the whole 4000-400 cm- 1 spectral range, improving over previously reported data. Both the geometric parameters and vibrational frequencies of the aldehyde group reveal the relevance in this molecule of the electronic charge back-donation effect from the oxygen trans lone electron pair to the aldehyde Csbnd H anti-bonding orbital. Upon in situ UV irradiation of the matrix-isolated compound, prompt decarbonylation was observed, leading to formation of pyridine.

  19. Impact of Spectroscopic Line Parameters on Carbon Monoxide Column Density Retrievals from Shortwave Infrared Nadir Observations

    NASA Astrophysics Data System (ADS)

    Schmidt, Denise; Gimeno Garcia, Sebastian; Schreier, Franz; Lichtenberg, Gunter

    2015-11-01

    Among the various input data required for the retrieval of atmospheric state parameters from infrared remote sensing observations molecular spectroscopy line data have a central role, because their quality is critical for the quality of the final product. Here we discuss the impact of the line parameters on vertical column densities (VCD) estimated from short wave infrared nadir observations. Using BIRRA (the Beer InfraRed Retrieval Algorithm) comprising a line-by-line radiative transfer code (forward model) and a separable nonlinear least squares solver for inversion we retrieve carbon monoxide from observations of SCIAMACHY aboard Envisat. Retrievals using recent versions of HITRAN und GEISA have been performed and the results are compared in terms of residual norms, molecular density scaling factors, their corresponding errors, and the final VCD product. The retrievals turn out to be quite similar for all three databases, so a definite recommendation in favor of one of these databases is difficult for the considered spectral range around 2.3 μm. Nevertheless, HITRAN 2012 appears to be advantageous when evaluating the different quality criteria.

  20. Near-Infrared Spectroscopic Analysis of Galaxy Mergers: Revealing Obscured Accretion

    NASA Astrophysics Data System (ADS)

    Ferguson, Jason; Constantin, Anca; Satyapal, Shobita; Rothberg, Barry

    2017-01-01

    Galaxy interactions are ubiquitous and are believed to play a pivotal role in the formation and evolution of galaxies via facilitating gas inflows toward the central region of galaxies. These interactions are expected to trigger accretion of matter onto the central supermassive black holes, i.e., AGN activity. Nevertheless, despite decades of searching, observationally confirmed dual AGNs remain extremely rare. We present here a thorough near-infrared characterization of six examples of interacting galaxies with unambiguous confirmation of on-going mergers that are optically quiescent but have red mid-infrared colors that are associated with extragalactic sources with powerful AGN. We show Large Binocular Telescope spectra of nuclear regions that reveal a rich variety of emission and absorption features which allow us to explore several diagnostic tests for the AGN activity as well as for properties of the underlying stellar population. We find strong evidence for AGN emission in five out of these six interacting systems, which provides strong support for the efficiency with which the mid-infrared pre-selection technique finds dual AGN, and thus could exponentially increase the population of dual accretion systems in advanced mergers.

  1. Differences in infrared spectroscopic data of connective tissues in transflectance and transmittance modes

    PubMed Central

    Hanifi, Arash; McGoverin, Cushla; Ou, Ya-Ting; Safadi, Fayez; Spencer, Richard; Pleshko, Nancy

    2013-01-01

    Fourier transform infrared imaging spectroscopy (FT-IRIS) has been used extensively to characterize the composition and orientation of macromolecules in thin tissue sections. Earlier and current studies of normal and polarized FT-IRIS data have primarily used tissues sectioned onto infrared transmissive substrates, such as salt windows. Recently, the use of low-emissivity (“low-e”) substrates has become of great interest because of their low cost and favourable infrared optical properties. However, data is collected in transflectance mode when using low-e slides and in transmittance mode using salt windows. In the current study we investigated the comparability of these two modes for assessment of the composition of connective tissues. FT-IRIS data were obtained in transflectance and transmittance modes from serial sections of cartilage, bone and tendon, and from a standard polymer, polymethylmethacrylate. Both non-polarized and polarized FTIR data differed in absorbance, and in some cases peak position, between transflectance and transmittance modes. However, the FT-IRIS analysis of the collagen fibril orientation in cartilage resulted in the expected zonal arrangement of fibrils in both transmittance and transflectance. We conclude that numerical comparison of FT-IRIS-derived parameters of tissue composition should account for substrate type and data collection mode, while analysis of overall tissue architecture may be more invariant between modes. PMID:23663670

  2. Infrared Spectroscopic and Theoretical Study of the HC_nO^+(N=5-12) Cations

    NASA Astrophysics Data System (ADS)

    Li, Wei; Jin, Jiaye; Wang, Guanjun; Zhou, Mingfei

    2017-06-01

    Carbon chains and derivatives are highly active species, which are widely existed as reactive intermediates in many chemical processes including atmospheric chemistry, hydrocarbon combustion, as well as interstellar chemistry. The carbon chain cations, HC_nO^+ (n = 5-12) are produced via pulsed laser vaporization of a graphite target in supersonic expansions containing carbon monoxide and hydrogen. The infrared spectra are measured via mass-selected infrared photodissociation spectroscopy of the CO "tagged" [HC_nO.CO] cation complexes in the 1600-3500 \\wn region. The geometries and electronic ground states of these cation complexes are determined by their infrared spectra in conjunction with theoretical calculations. All the HC_nO^+ (n = 5-12) core cations are characterized to be linear carbon chain derivatives terminated by hydrogen and oxygen. The HC_nO^+ cations with odd n have closed-shell singlet ground states with polyyne-like structures, while those with even n have triplet ground states with allene-like structures.

  3. Differences in infrared spectroscopic data of connective tissues in transflectance and transmittance modes.

    PubMed

    Hanifi, Arash; McGoverin, Cushla; Ou, Ya-Ting; Safadi, Fayez; Spencer, Richard G; Pleshko, Nancy

    2013-05-24

    Fourier transform infrared imaging spectroscopy (FT-IRIS) has been used extensively to characterize the composition and orientation of macromolecules in thin tissue sections. Earlier and current studies of normal and polarized FT-IRIS data have primarily used tissues sectioned onto infrared transmissive substrates, such as salt windows. Recently, the use of low-emissivity ("low-e") substrates has become of great interest because of their low cost and favorable infrared optical properties. However, data are collected in transflectance mode when using low-e slides and in transmittance mode using salt windows. In the current study we investigated the comparability of these two modes for assessment of the composition of connective tissues. FT-IRIS data were obtained in transflectance and transmittance modes from serial sections of cartilage, bone and tendon, and from a standard polymer, polymethylmethacrylate. Both non-polarized and polarized FTIR data differed in absorbance, and in some cases peak position, between transflectance and transmittance modes. However, the FT-IRIS analysis of the collagen fibril orientation in cartilage resulted in the expected zonal arrangement of fibrils in both transmittance and transflectance. We conclude that numerical comparison of FT-IRIS-derived parameters of tissue composition should account for substrate type and data collection mode, while analysis of overall tissue architecture may be more invariant between modes.

  4. Automated High-Pressure Titration System with In Situ Infrared Spectroscopic Detection

    SciTech Connect

    Thompson, Christopher J.; Martin, Paul F.; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.

    2014-04-17

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell’s infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct radiation from a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system is demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay’s sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to dissolve

  5. Automated high-pressure titration system with in situ infrared spectroscopic detection

    NASA Astrophysics Data System (ADS)

    Thompson, Christopher J.; Martin, Paul F.; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.

    2014-04-01

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to dissolve

  6. Automated high-pressure titration system with in situ infrared spectroscopic detection.

    PubMed

    Thompson, Christopher J; Martin, Paul F; Chen, Jeffrey; Benezeth, Pascale; Schaef, Herbert T; Rosso, Kevin M; Felmy, Andrew R; Loring, John S

    2014-04-01

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO2 (scCO2) to generate an infrared calibration curve and determine the solubility of water in CO2 at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO2 at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO2 hydration, and ATR measurements provided insights into competitive residency of water and CO2 on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg2SiO4) in water-bearing scCO2 at 50 °C and 90 bar. Immediately after water dissolved in the scCO2, a thin film of adsorbed water formed on the mineral surface, and the film thickness increased with time as the forsterite began to

  7. Modeling Ellipsometry Measurements of Molecular Thin-Film Contamination on Genesis Array Samples

    NASA Technical Reports Server (NTRS)

    Calaway, Michael J.; Stansbery, E. K.; McNamara, K. M.

    2006-01-01

    The discovery of a molecular thin-film contamination on Genesis flown array samples changed the course of preliminary assessment strategies. Analytical techniques developed to measure solar wind elemental abundances must now compensate for a thin-film contamination. Currently, this is done either by experimental cleaning before analyses or by depth-profiling techniques that bypass the surface contamination. Inside Johnson Space Center s Genesis dedicated ISO Class 4 (Class 10) cleanroom laboratory, the selection of collector array fragments allocated for solar wind analyses are based on the documentation of overall surface quality, visible surface particle contamination greater than 1 m, and the amount of thin film contamination measured by spectroscopic ellipsometry. Documenting the exact thickness, surface topography, and chemical composition of these contaminates is also critical for developing accurate cleaning methods. However, the first step in characterization of the molecular film is to develop accurate ellipsometry models that will determine an accurate thickness measurement of the contamination film.

  8. Mid-infrared spectroscopic study of crystallization of cubic spinel phase from metakaolin

    SciTech Connect

    Ptacek, Petr

    2011-10-15

    The structural changes during thermal conversion of metakaolinite into cubic spinel phase that was in literature considered as Al-Si spinel or {gamma}-Al{sub 2}O{sub 3} were investigated by mid-infrared spectroscopy (FT-IR) and differential scanning calorimetry (DSC) using medium ordered kaolin with high content of kaolinite. Spectrum features were studied in the mid-infrared region from 4000 to 400 cm{sup -1} as function of fractional conversion that resulted from DSC experiments. The increasing contends of Al-O bonds in the octahedral position (AlO{sub 6}) was observed during thermal transformation. The high ratio of antisymmetric stretching of {identical_to}Si-O-Al= and {identical_to}Si-O-Si{identical_to} bands and bands belonging to stretching of =Al-O bonds in the (AlO{sub 4}) tetrahedra and (AlO{sub 6}) octahedra decreases exponentially with fractional conversion. The antisymmetric stretching band of {identical_to}Si-O-Si{identical_to} bond in the (SiO{sub 4}) tetrahedra becomes more expressive due to formation of amorphous SiO{sub 2} phase. - Graphical abstract: The thermal conversion of metakaolinite into spinel phase was investigated by mid-infrared spectroscopy to found relationship between bands features and fractional convesrion. Highlights: > Formation of spinel phase from metakaolinite was studied by FT-IR. > Relationship between spectrum features and fractional conversion was investigated. > Intensity ratios of (AlO{sub 4}) and (AlO{sub 6}) decreases exponentially. > Antisymmetric stretching of (SiO{sub 4}) becomes more expressive during transformation.

  9. Infrared spectroscopic and chemometric approach for identifying binding medium in Sukias mansion's wall paintings.

    PubMed

    Haghighi, Zahra; Karimy, Amir-Hossein; Karami, Farshad; Bagheri Garmarudi, Amir; Khanmohammadi, Mohammadreza

    2015-11-11

    This paper addresses the application of infrared spectroscopy in combination with chemometrics to identify wall painting's binding medium while employing pattern recognition techniques to process FTIR data-set of complex samples. In this regard, based on the historical documents and previous researches, firstly 56 standard samples were prepared to represent strata of Persian wall paintings in the Safavid period in addition to real historic samples from the case study; Sukias mansion. Then, each sample was analysed by the means of FTIR and chemometrics. Finally, SIMCA was applied to the whole region of studied IR spectra which predicted egg yolk as the binding medium of Sukias mansion samples.

  10. Fourier Transform Infrared Spectroscopic Analysis Of Plastic Capsule Materials Exposed To Deuterium-Tritium (DT) Gas

    SciTech Connect

    Schoonover, J R; Steckle, Jr., W P; Elliot, N; Ebey, P S; Nobile, A; Nikroo, A; Cook, R C; Letts, S A

    2005-06-16

    Planar samples of varying thicknesses of both CH and CD glow discharge polymer have been measured with Fourier transform infrared (FTIR) spectroscopy before and after exposure to deuterium-tritium (DT) gas at elevated temperature and pressure. Planar samples of polyimide films made from both hydrogenated and deuterated precursors have also been examined by FTIR before and after DT exposure. The post-exposure FTIR spectra demonstrated no measurable exchange of hydrogen with deuterium or tritium for either polymer. Evidence for oxidation of the glow discharge polymer due to atmospheric oxygen was the only chemical change indicated by the FTIR data.

  11. Magnesium bicarbonate and carbonate interactions in aqueous solutions: An infrared spectroscopic and quantum chemical study

    NASA Astrophysics Data System (ADS)

    Stefánsson, Andri; Lemke, Kono H.; Bénézeth, Pascale; Schott, Jacques

    2017-02-01

    The interaction of magnesium with bicarbonate and carbonate ions in aqueous solutions was studied using infrared spectroscopy and quantum chemical calculations. Using the infrared vibrational bands for HCO3- and CO32- at 1200-1450 cm-1 (δC-OH, vS and v3) together with their molar absorptivity (ε), the concentrations of the HCO3- and CO32- ions and the corresponding Mg ion pairs have been determined. In the absence of Mg2+, measured spectra were accurately reproduced assuming that only HCO3- and CO32- were present in solution. Upon addition of Mg2+ at fixed pH, infrared spectra were observed to shift indicating presence of the MgHCO3+ and MgCO3 (aq) ion pairs. From measurements, the second ionization constant of carbonic acid and the MgHCO3+ and MgCO3 (aq) ion pair formation constants have been obtained, these being logK2 = -10.34 ± 0.04, logKMgHCO3+ = 1.12 ± 0.11 and logKMgCO3 = 2.98 ± 0.06, respectively. To support our experimental infrared measurements and to gain further insight into the molecular nature of the ion pair formation, density functional theory (DFT) calculations with VPT2 anharmonic correction were conducted. The most stable geometries predicted for the MgHCO3+ and MgCO3 (aq) ion pairs were a bi-dentate [MgHCO3]+(H2O)n and a monodentate [MgHCO3]+(OH)(H2O)n complexes, respectively. The predicted frequencies for HCO3-, CO32- and MgHCO3+ were found to shift toward those experimentally measured with an increasing H2O solvation number where possible band shifts were predicted for MgCO3 (aq) relative to CO32-, this being dependent on the exact structure and hydration of the bulk MgCO3 (aq) ion pair. Experimentally, the ion pair formations were found to have insignificant effects on the δC-OH, vS and v3 vibrational frequencies. The speciation of dissolved inorganic carbon may be significantly influenced by ion pair formation, particularly in alkaline solutions where they may be the predominant species.

  12. A Raman and Infrared Spectroscopic Study of Anglesite at High Pressures

    NASA Astrophysics Data System (ADS)

    Sawchuk, K. L. S.; Vennari, C.; O'Bannon, E. F., III; Williams, Q.

    2016-12-01

    Raman and infrared spectra of the barite-structured lead sulfate, anglesite (PbSO4), were collected to 40 GPa and 300 K. Our particular interest in this compound is oriented towards determining what post-barite structures sulfates in the deep earth sulfur cycle might ultimately convert to at high pressures. Additionally, the study of ABX4 materials has applications to materials science that include their usage as scintillation detectors, and PbSO4 has been demonstrated to have non-linear optical properties. Measurements were made of the internal modes of the SO4 group that lie between 400 and 1200 cm-1 and lattice vibrations that occur between 50 and 250 cm-1. In accord with previous Raman work of Lee et al. (WJCMP, 2012), two phase transitions initiate at 13 and 23 GPa which are reversible on decompression. The 13 GPa transition is subtle and involves splitting of a few modes, particularly the SO4 tetragonal stretching and bending-derived Raman and associated infrared modes. This transition likely goes to a structure with a greater degree of Davydov splitting between corresponding Raman- and infrared-active vibrations, which may indicate a greater distortion of the SO4 tetrahedra. The transition at 23 GPa is a major, sluggish, transition that causes splitting and/or shifting in all observed Raman and infrared modes. These new peaks are lower in frequency and become the sole spectral features by 42 GPa suggesting a higher symmetry structure than previously inferred. It appears that this transition involves a coexistence of phases until the transition is ultimately complete around 42 GPa. Based on the structural systematics of ABX4 phases and factor group analysis, it is likely the structure goes to the monazite structure at high pressures, but that this transition required marked overpressurization to occur at 300K. The accessing of this monazite-like phase is in general accord with systematics of high-pressure transitions in ABX4 phases, and indicates that

  13. Fourier transform infrared spectroscopic characterization of grafting of 3-aminopropyl silanol onto aluminum/alumina substrate

    NASA Astrophysics Data System (ADS)

    Azour, Halima; Derouault, Jean; Lauroua, Pierre; Vezon, Gérard

    2000-07-01

    In order to remedy the limitations of state-of-the-art methods for red blood cells grouping and antibody screening we have tried to develop a new type of immunosensors based upon a metallic substrate. The first two steps of the manufacturing of such a sensor consist in the anodization and in the silanization of the metal surface. Fourier transform infrared spectroscopy (FTIR) has been used to investigate aluminum samples treated with the above process. FTIR analysis allows the accurate determination of the grafted species, and thus to perform the optimization of the experimental parameters.

  14. Regression models based on new local strategies for near infrared spectroscopic data.

    PubMed

    Allegrini, F; Fernández Pierna, J A; Fragoso, W D; Olivieri, A C; Baeten, V; Dardenne, P

    2016-08-24

    In this work, a comparative study of two novel algorithms to perform sample selection in local regression based on Partial Least Squares Regression (PLS) is presented. These methodologies were applied for Near Infrared Spectroscopy (NIRS) quantification of five major constituents in corn seeds and are compared and contrasted with global PLS calibrations. Validation results show a significant improvement in the prediction quality when local models implemented by the proposed algorithms are applied to large data bases. Copyright © 2016 Elsevier B.V. All rights reserved.

  15. Fourier transform infrared spectroscopic characterization of grafting of 3-aminopropyl silanol onto aluminum/alumina substrate.

    PubMed

    Azour, H; Derouault, J; Lauroua, P; Vezon, G

    2000-07-01

    In order to remedy the limitations of state-of-the-art methods for red blood cells grouping and antibody screening we have tried to develop a new type of immunosensors based upon a metallic substrate. The first two steps of the manufacturing of such a sensor consist in the anodization and in the silanization of the metal surface. Fourier transform infrared spectroscopy (FTIR) has been used to investigate aluminum samples treated with the above process. FTIR analysis allows the accurate determination of the grafted species, and thus to perform the optimization of the experimental parameters.

  16. Compact Broad-Band Wavelength-Agile Mid-Infrared Semiconductor Lasers for Spectroscopic Sensing

    DTIC Science & Technology

    2004-12-01

    IEEE Photon. Technol. Lett. Jan 2005). Yi Wang, Chuan Peng, HuanLin Zhang, and Han Q. Le, “Wavelength modulation imaging with tunable mid- infrared...Wen-Yen Hwang, Jae Um, Bujin Guo, Hao Lee, and Chih- Hsiang Lin, “Continuous-wave operation of a 5.2 µm quantum-cascade laser up to 210 K”, Appl. Phys...Lett. 79, 1745-1747, (2001). 2. Proceedings Yi Wang, Yang Wang, Chuan Peng, HuanLin Zhang, Anush Seetheraman, and Han Q. Le, “Concepts for Scalable

  17. Investigating the origin and spectroscopic variability of the near-infrared H I lines in the Herbig star VV Ser

    NASA Astrophysics Data System (ADS)

    Garcia Lopez, Rebeca; Kurosawa, Ryuichi; Caratti o Garatti, Alessio; Kreplin, Alexander; Weigelt, Gerd; Tambovtseva, Larisa V.; Grinin, Vladimir P.; Ray, Thomas P.

    2016-02-01

    The origin of the near-infrared (NIR) H I emission lines in young stellar objects are not yet understood. To probe it, we present multi-epoch LBT-LUCIFER spectroscopic observations of the Paδ, Paβ, and Brγ lines observed in the Herbig star VV Ser, along with Very Large Telescope Interferometer-AMBER Brγ spectro-interferometric observations at medium resolution. Our spectroscopic observations show line profile variability in all the H I lines. The strongest variability is observed in the redshifted part of the line profiles. The Brγ spectro-interferometric observations indicate that the Brγ line emitting region is smaller than the continuum emitting region. To interpret our results, we employed radiative transfer models with three different flow configurations: magnetospheric accretion, a magnetocentrifugally driven disc wind, and a schematic bipolar outflow. Our models suggest that the H I line emission in VV Ser is dominated by the contribution of an extended wind, perhaps a bipolar outflow. Although the exact physical process for producing such outflow is not known, this model is capable of reproducing the averaged single-peaked line profiles of the H I lines. Additionally, the observed visibilities, differential and closure phases are best reproduced when a wind is considered. Nevertheless, the complex line profiles and variability could be explained by changes in the relative contribution of the magnetosphere and/or winds to the line emission. This might indicate that the NIR H I lines are formed in a complex inner disc region where inflow and outflow components might coexist. Furthermore, the contribution of each of these mechanisms to the line appears time variable, suggesting a non-steady accretion/ejection flow.

  18. The H2O-CH3F Complex: a Combined Microwave and Infrared Spectroscopic Study Supported by Structure Calculations

    NASA Astrophysics Data System (ADS)

    Gnanasekar, Sharon Priya; Goubet, Manuel; Arunan, Elangannan; Georges, Robert; Soulard, Pascale; Asselin, Pierre; Huet, T. R.; Pirali, Olivier

    2015-06-01

    The H2O-CH3F complex could have two geometries, one with a hydrogen bond and one with the newly proposed carbon bond. While in general carbon bonds are weaker than hydrogen bonds, this complex appears to have comparable energies for the two structures. Infrared (IR) and microwave (MW) spectroscopic measurements using, respectively, the Jet-AILES apparatus and the FTMW spectrometer at the PhLAM laboratory, have been carried out to determine the structure of this complex. The IR spectrum shows the formation of the CH3F- H2O hydrogen bonded complex and small red-shifts in OH frequency most probably due to (CH3F)m-(H2O)n clusters. Noticeably, addition of CH_3F in the mixture promotes the formation of small water clusters. Preliminary MW spectroscopic measurements indicate the formation of the hydrogen bonded complex. So far, we have no experimental evidence for the carbon bonded structure. However, calculations of the Ar-CH3F complex show three energetically equivalent structures: a T-shape, a "fluorine" bond and a carbon bond. The MW spectrum of the (Ar)n-CH3F complexes is currently under analysis. Mani, D; Arunan, E. Phys. Chem. Chem. Phys. 2013, 15, 14377. Cirtog, M; Asselin, P; Soulard, P; Tremblay, B; Madebene, B; Alikhani, M. E; Georges, R; Moudens, A; Goubet, M; Huet, T.R; Pirali, O; Roy, P. J. Phys. Chem. A. 2011, 115, 2523 Kassi, S; Petitprez, D; Wlodarczak, G. J. Mol. Struct. 2000, 517-518, 375

  19. Characterising molecules for fundamental physics: an accurate spectroscopic model of methyltrioxorhenium derived from new infrared and millimetre-wave measurements.

    PubMed

    Asselin, Pierre; Berger, Yann; Huet, Thérèse R; Margulès, Laurent; Motiyenko, Roman; Hendricks, Richard J; Tarbutt, Michael R; Tokunaga, Sean K; Darquié, Benoît

    2017-02-08

    Precise spectroscopic analysis of polyatomic molecules enables many striking advances in physical chemistry and fundamental physics. We use several new high-resolution spectroscopic devices to improve our understanding of the rotational and rovibrational structure of methyltrioxorhenium (MTO), the achiral parent of a family of large oxorhenium compounds that are ideal candidate species for a planned measurement of parity violation in chiral molecules. Using millimetre-wave and infrared spectroscopy in a pulsed supersonic jet, a cryogenic buffer gas cell, and room temperature absorption cells, we probe the ground state and the Re[double bond, length as m-dash]O antisymmetric and symmetric stretching excited states of both CH3(187)ReO3 and CH3(185)ReO3 isotopologues in the gas phase with unprecedented precision. By extending the rotational spectra to the 150-300 GHz range, we characterize the ground state rotational and hyperfine structure up to J = 43 and K = 41, resulting in refinements to the rotational, quartic and hyperfine parameters, and the determination of sextic parameters and a centrifugal distortion correction to the quadrupolar hyperfine constant. We obtain rovibrational data for temperatures between 6 and 300 K in the 970-1015 cm(-1) range, at resolutions down to 8 MHz and accuracies of 30 MHz. We use these data to determine more precise excited-state rotational, Coriolis and quartic parameters, as well as the ground-state centrifugal distortion parameter DK of the (187)Re isotopologue. We also account for hyperfine structure in the rovibrational transitions and hence determine the upper state rhenium atom quadrupole coupling constant eQq'.

  20. IN SITU ELLIPSOMETRY FOR SHOCK COMPRESSION MEASUREMENTS

    SciTech Connect

    Bakshi, L.; Eliezer, S.; Appelbaum, G.; Nissim, N.; Perelmutter, L.; Mond, M.

    2009-12-28

    Knowledge about the optical properties of materials at high pressure and high temperature is needed for EOS research. Ellipsometry measures the change in the polarization of a probe beam reflected from a surface. From the change in polarization, the real and imaginary parts of the time dependent complex index of refraction can be extracted. From the measured optical properties, fundamental physical properties of the material, such as emissivity, phase transitions, and electrical conductivity can be extracted. A dynamic ellipsometry measurement system with nanosecond resolution was built in order to measure all four stocks parameters. Gas gun was used to accelerate the impact flyer. Our experiments concentrated on the optical properties of 1020 steel targets with impact pressure range of 40-250 kbar. Although there are intrinsic difficulties with dynamic ellipsometric measurements, distinct changes were observed for 1020 steel under shock compression larger than 130 kbar, the alpha->epsilon phase transition.

  1. Jet Fuel Thermal Stability Investigations using Ellipsometry

    NASA Technical Reports Server (NTRS)

    Nash, Leigh; Klettlinger, Jennifer; Vasu, Subith

    2017-01-01

    Ellipsometry is an optical technique used to measure the thickness of thin films. This technique was used to measure the thickness of deposits created by heated jet fuel, specifically Sasol IPK on stainless steel tubes. A new amorphous model was used to iteratively determine the film thickness. This method was found to be repeatable, and the thickness of deposit increased with increasing temperature and increasing concentration of naphthalene.

  2. Single-mode interband cascade laser sources for mid-infrared spectroscopic applications

    NASA Astrophysics Data System (ADS)

    Scheuermann, J.; von Edlinger, M.; Weih, R.; Becker, S.; Nähle, L.; Fischer, M.; Koeth, J.; Kamp, M.; Höfling, S.

    2016-05-01

    Compared to the near infrared, many technologically and industrially relevant gas species have more than an order of magnitude higher absorption features in the mid-infrared (MIR) wavelength range. These species include for example important hydrocarbons (methane, acetylene), nitrogen oxides and sulfur oxides. Tunable laser absorption spectroscopy (TLAS) has proven to be a versatile tool for gas sensing applications with significant advantages compared to other techniques. These advantages include real time measurement, standoff detection and ruggedness of the sensor. We present interband cascade lasers (ICLs), which have evolved into important laser sources for the MIR spectral range from 3 to 7 μm. ICLs achieve high efficiency by cascading optically active zones whilst using interband transitions, so they combine common diode laser as well as quantum cascade laser based technologies. Our application grade singlemode distributed feedback devices operate continuous wave at room temperature and are offering several features especially useful for high performance TLAS applications like: side mode suppression ratio of > 30 dB, continuous tuning ranges up to 30 nm, low threshold power densities and low overall power consumption. The devices are typically integrated in a thermoelectrically cooled TO-style package, hermetically sealed using a cap with anti-reflection coated window. This low power consumption as well as the compact size and ruggedness of the fabricated laser sources makes them perfectly suited for battery powered portable solutions for in field spectroscopy applications.

  3. Reflective and photoacoustic infrared spectroscopic techniques in assessment of binding media in paintings

    NASA Astrophysics Data System (ADS)

    Łojewski, Tomasz; Bagniuk, Jacek; Kołodziej, Andrzej; Łojewska, Joanna

    2011-11-01

    This study proposes a method to estimate the lipid content in binding media in paintings that can be used at any laboratory equipped with an infrared spectrometer. The lipid content estimator, termed greasiness index (GI), is defined as a ratio of lipid ν(C=O) and protein amide I bands at 1743 and 1635 cm-1, respectively. Three Fourier transform infrared (FTIR) sampling techniques were evaluated for GI determination: reflective attenuated total reflection—ATR, specular reflection microscopy— μSR and photoacoustic—PAS. A set of model painting samples containing three tempera binding media (casein, egg, egg + oil), seven pigments and one varnish type were used in the study. Multivariate analysis was used to evaluate the resulting data. A good reproducibility of GI was obtained by ATR and PAS but not with μSR. The discriminative power of the technique is higher for unvarnished samples, but, generally, the GI estimator can be used for the categorisation of binding media in large populations of painting samples analysed with the same FTIR technique (sampling technique, detection, etc.).

  4. Automated high-pressure titration system with in situ infrared spectroscopic detection

    SciTech Connect

    Thompson, Christopher J. Martin, Paul F.; Chen, Jeffrey; Schaef, Herbert T.; Rosso, Kevin M.; Felmy, Andrew R.; Loring, John S.; Benezeth, Pascale

    2014-04-15

    A fully automated titration system with infrared detection was developed for investigating interfacial chemistry at high pressures. The apparatus consists of a high-pressure fluid generation and delivery system coupled to a high-pressure cell with infrared optics. A manifold of electronically actuated valves is used to direct pressurized fluids into the cell. Precise reagent additions to the pressurized cell are made with calibrated tubing loops that are filled with reagent and placed in-line with the cell and a syringe pump. The cell's infrared optics facilitate both transmission and attenuated total reflection (ATR) measurements to monitor bulk-fluid composition and solid-surface phenomena such as adsorption, desorption, complexation, dissolution, and precipitation. Switching between the two measurement modes is accomplished with moveable mirrors that direct the light path of a Fourier transform infrared spectrometer into the cell along transmission or ATR light paths. The versatility of the high-pressure IR titration system was demonstrated with three case studies. First, we titrated water into supercritical CO{sub 2} (scCO{sub 2}) to generate an infrared calibration curve and determine the solubility of water in CO{sub 2} at 50 °C and 90 bar. Next, we characterized the partitioning of water between a montmorillonite clay and scCO{sub 2} at 50 °C and 90 bar. Transmission-mode spectra were used to quantify changes in the clay's sorbed water concentration as a function of scCO{sub 2} hydration, and ATR measurements provided insights into competitive residency of water and CO{sub 2} on the clay surface and in the interlayer. Finally, we demonstrated how time-dependent studies can be conducted with the system by monitoring the carbonation reaction of forsterite (Mg{sub 2}SiO{sub 4}) in water-bearing scCO{sub 2} at 50 °C and 90 bar. Immediately after water dissolved in the scCO{sub 2}, a thin film of adsorbed water formed on the mineral surface, and the film

  5. Infrared spectroscopic study of thermotropic phase behavior of newly developed synthetic biopolymers.

    PubMed

    Bista, Rajan K; Bruch, Reinhard F; Covington, Aaron M

    2011-10-15

    The thermotropic phase behavior of a suite of newly developed self-forming synthetic biopolymers has been investigated by variable-temperature Fourier transform infrared (FT-IR) absorption spectroscopy. The temperature-induced infrared spectra of these artificial biopolymers (lipids) composed of 1,2-dimyristoyl-rac-glycerol-3-dodecaethylene glycol (GDM-12), 1,2-dioleoyl-rac-glycerol-3-dodecaethylene glycol (GDO-12) and 1,2-distearoyl-rac-glycerol-3-triicosaethylene glycol (GDS-23) in the spectral range of 4000-500 cm(-1) have been acquired by using a thin layered FT-IR spectrometer in conjunction with a custom built temperature-controlled demountable liquid cell having a pathlength of ∼15 μm. The lipids under consideration have long hydrophobic acyl chains and contain various units of hydrophilic polyethylene glycol (PEG) headgroups. In contrast to conventional phospholipids, this new kind of lipids forms liposomes or nanovesicles spontaneously upon hydration, without requiring external activation energy. We have found that the thermal stability of the PEGylated lipids differs greatly depending upon the acyl chain-lengths as well as the nature of the associated bonds and the number of PEG headgroup units. In particular, GDM-12 (saturated 14 hydrocarbon chains with 12 units of PEG headgroup) exhibits one sharp order-disorder phase transition over a temperature range increasing from 3°C to 5°C. Similarly, GDS-23 (saturated 18 hydrocarbon chains with 23 units of PEG headgroup) displays comparatively broad order-disorder phase transition profiles between temperature 17°C and 22°C. In contrast, GDO-12 (monounsaturated 18 hydrocarbon chains with 12 units of PEG headgroup) does not reveal any order-disorder transition phenomena demonstrating a highly disordered behavior for the entire temperature range. To confirm these observations, differential scanning calorimetry (DSC) was applied to the samples and revealed good agreement with the infrared spectroscopy results

  6. Infrared Spectroscopic Study of the Acidic CH Bonds in Hydrated Clusters of Cationic Pentane.

    PubMed

    Endo, Tomoya; Matsuda, Yoshiyuki; Fujii, Asuka

    2017-09-18

    Infrared spectroscopy of the hydrated clusters of cationic pentane, which are generated through the vacuum ultraviolet photoionization in the gas phase, is carried out to probe the acidic properties of their CH bonds. The monohydrated pentane cation forms the proton-shared structure, in which the proton of CH in cationic pentane is shared between the pentyl radical and water molecule. In the di- and trihydrated clusters, the proton of CH is completely transferred to the water moiety so that the clusters are composed of the pentyl radical and protonated water cluster. These results indicate that two water molecules are enough to cause the proton transfer from CH of cationic pentane, and thus its acidity is highly enhanced with the ionization.

  7. Structure and spectroscopic properties of Er3+ doped germanate glass for mid-infrared application

    NASA Astrophysics Data System (ADS)

    Wei, Tao; Chen, Fangze; Jing, Xufeng; Wang, Fengchao; Tian, Ying; Xu, Shiqing

    2014-05-01

    Intense 2.7 μm emission derived from modified Er3+ doped germanate glass was reported. Raman spectrum analysis was carried out to grasp glass structure. Based on the absorption spectrum, the Judd-Ofelt parameters and radiative properties were calculated originated from Judd-Ofelt theory. 2.7 μm emission characteristics, stark splitting features and energy transfer processes upon excitation of a conventional 808 nm or 980 nm laser diode were carefully investigated. The prepared glass possesses high spontaneous transition probability (34.28 s-1), large calculated emission cross section (13 × 10-21 cm2) and gain coefficient (5.4 cm-1) for the 4I11/2 → 4I13/2 transition. These results indicate that Er3+ doped germanate glass has potential applications in mid-infrared lasers and amplifiers.

  8. Spectroscopically forbidden infra-red emission in Au-vertical graphene hybrid nanostructures.

    PubMed

    Sivadasan, A K; Parida, Santanu; Ghosh, Subrata; Pandian, Ramanathaswamy; Dhara, Sandip

    2017-09-19

    Implementation of Au nanoparticles (NPs) is a subject for frontier plasmonic research due to its fascinating optical properties. Herein, the present study deals with plasmonic assisted emission properties of Au NPs-vertical graphene (VG) hybrid nanostructures. The influence of effective polarizability of Au NPs on the surface enhanced Raman scattering and luminescence properties is investigated. In addition, a remarkable infra-red (IR) emission in the hybrid nanostructures is observed and interpreted on the basis of intra-band transitions in Au NPs. The flake-like nanoporous VG structure is invoked for the generation of additional confined photons to impart additional momentum and a gradient of confined excitation energy towards initiating the intra-band transitions of Au NPs. Integrating Au plasmonic materials in three-dimensional VG nanostructures enhances the light-matter interactions. The present study provides a new adaptable plasmonic assisted pathway for optoelectronic and sensing applications. © 2017 IOP Publishing Ltd.

  9. Infrared and 13C MAS nuclear magnetic resonance spectroscopic study of acetylation of cotton

    NASA Astrophysics Data System (ADS)

    Adebajo, Moses O.; Frost, Ray L.

    2004-01-01

    The acetylation of commercial cotton samples with acetic anhydride without solvents in the presence of about 5% 4-dimethylaminopyridine (DMAP) catalyst was followed using Fourier transform infrared (FTIR) and 13C MAS NMR spectroscopy. This preliminary investigation was conducted in an effort to develop hydrophobic, biodegradable, cellulosic materials for subsequent application in oil spill cleanup. The FTIR results provide clear evidence for successful acetylation though the NMR results indicate that the level of acetylation is low. Nevertheless, the overall results indicate that cotton fibres are potential candidates suitable for further development via acetylation into hydrophobic sorbent materials for subsequent oil spill cleanup application. The results also indicate that de-acetylation, the reverse of the equilibrium acetylation reaction, occurred when the acetylation reaction was prolonged beyond 3 h.

  10. Infrared spectroscopic investigation of erythrocyte membrane-smoke interactions due to chronic cigarette smoking.

    PubMed

    Sherif, Mahmoud S; Mervat, Ali A; Eman, Aly M

    2017-07-01

    Cigarette smoking is a serious health problem throughout the world, with a complicated and not totally clear bio-effect. In this study, erythrocytes were obtained from healthy male volunteers aged 22 ± 2 years and, the possible effects of three cigarette smoking rates namely 10, 15 and 20 cigarette/day on erythrocytes membrane characteristics were examined by Fourier transform infrared spectroscopy (FTIR). The results of this study indicate many smoking-dependent variations on erythrocytes membrane without an obvious dose-response relationship. There was disruption in the acyl chain packing; changes in membrane order and phases as well as membrane proteins becoming more folded. These physico-chemical changes should have an impact on the function of erythrocytes and may explain the complex interaction of cigarette smoke mainstream with erythrocyte membrane and to some extent clarify the pathological processes associated with cigarette smoking.

  11. Opening of an icosahedral boron framework: A combined infrared spectroscopic and computational study

    NASA Astrophysics Data System (ADS)

    Fagiani, Matias R.; Liu Zeonjuk, L.; Esser, Tim K.; Gabel, Detlef; Heine, Thomas; Asmis, Knut R.; Warneke, Jonas

    2015-04-01

    The opening of an icosahderal boron cage in the periodinated closo-dodecaborate B12I122- upon deiodination is studied using cryogenic ion trap vibrational spectroscopy combined with electronic structure calculations. Comparison of simulated vibrational spectra to the infrared photodissociation spectra of messenger-tagged B12I122- and B12In- (n = 7-9) formed by skimmer collision induced dissociation shows that the larger clusters absorb exclusively below 975 cm-1 and hence exhibit quasi-icosahedral B12-cage structures, while the higher energy absorptions in-between 1000 and 1300 cm-1 observed for n = 7 can only be recovered by considering a breakup of the icosahedral cage upon deiodination from n = 8 to n = 7.

  12. Infrared spectroscopic studies on reaction induced conformational changes in the NADH ubiquinone oxidoreductase (complex I).

    PubMed

    Hellwig, Petra; Kriegel, Sébastien; Friedrich, Thorsten

    2016-07-01

    Redox-dependent conformational changes are currently discussed to be a crucial part of the reaction mechanism of the respiratory complex I. Specialized difference Fourier transform infrared techniques allow the detection of side-chain movements and minute secondary structure changes. For complex I, (1)H/(2)H exchange kinetics of the amide modes revealed a better accessibility of the backbone in the presence of NADH and quinone. Interestingly, the presence of phospholipids, that is crucial for the catalytic activity of the isolated enzyme complex, changes the overall conformation. When comparing complex I samples from different species, very similar electrochemically induced FTIR difference spectra and very similar rearrangements are reported. Finally, the information obtained with variants and from Zn(2+) inhibited samples for the conformational reorganization of complex I upon electron transfer are discussed in this review. This article is part of a Special Issue entitled Respiratory complex I, edited by Volker Zickermann and Ulrich Brandt.

  13. Accounting for tissue heterogeneity in infrared spectroscopic imaging for accurate diagnosis of thyroid carcinoma subtypes.

    PubMed

    Martinez-Marin, David; Sreedhar, Hari; Varma, Vishal K; Eloy, Catarina; Sobrinho-Simões, Manuel; Kajdacsy-Balla, André; Walsh, Michael J

    2017-07-01

    Fourier transform infrared (FT-IR) microscopy was used to image tissue samples from twenty patients diagnosed with thyroid carcinoma. The spectral data were then used to differentiate between follicular thyroid carcinoma and follicular variant of papillary thyroid carcinoma using principle component analysis coupled with linear discriminant analysis and a Naïve Bayesian classifier operating on a set of computed spectral metrics. Classification of patients' disease type was accomplished by using average spectra from a wide region containing follicular cells, colloid, and fibrosis; however, classification of disease state at the pixel level was only possible when the extracted spectra were limited to follicular epithelial cells in the samples, excluding the relatively uninformative areas of fibrosis. The results demonstrate the potential of FT-IR microscopy as a tool to assist in the difficult diagnosis of these subtypes of thyroid cancer, and also highlights the importance of selectively and separately analyzing spectral information from different features of a tissue of interest.

  14. Spectroscopic Analysis of Various Phases of Water with an Intrinsic Near-Infrared Optical Sensor System

    NASA Astrophysics Data System (ADS)

    Igbinosun, Osazonamen J.

    Results and analysis are reported for near-infrared spectra obtained using an intrinsic optical sensor system. An experimental facility was designed to integrate fiber optic cables with an FTIR spectrometer. Wavelength-dependent spectral signatures were observed for the solid, liquid, and adsorbed phases of water at 1.94 and 1.45 micrometers. The data obtained can be used to characterize the water abundance of a medium on very small scales and can aid our understanding of the behavior of water and thermal properties of planetary surfaces by observing, for example, ice formation in void spaces between mineral grains. This system will be further developed for use in an environmental simulation facility to analyze Mars analog soils. The implications of this work could impact future space missions in regard to the availability of critical resources for human missions and the search for non-terrestrial life.

  15. An infrared spectroscopic tool for process monitoring: sugar contents during the production of a depilatory formulation.

    PubMed

    Kuligowski, Julia; Cascant, Mercedes; Garrigues, Salvador; de la Guardia, Miguel

    2012-09-15

    A fast, reliable and economical methodology has been developed to control the production process of sugar-based depilatories. The method is based on the use of attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy in combination with multivariate data analysis. A very simple sample preparation process involving the dissolution of samples in water was applied. Employing a multivariate calibration model established from data of 15 well characterized samples, prediction errors equal or below 3.04 mg mL(-1) for the quantitative determination of fructose, glucose, sucrose, maltose and maltotriose were obtained. Results found in this preliminary study indicate a great potential for the development of at-line ATR-FTIR-PLS methods based on a careful selection of variables from IR spectra, delivering fast and reliable results. As a reference method, a liquid chromatography (LC)-IR method was adapted for sample characterization. Copyright © 2012 Elsevier B.V. All rights reserved.

  16. Time-resolved near-infrared spectroscopic study of the dissolution of crystalline lactose.

    PubMed

    Hattori, Yusuke; Otsuka, Makoto

    2012-12-18

    In the present study, initial dissolution of crystalline α-lactose monohydrate was investigated via time-resolved Fourier Transform near-infrared (FT-NIR) spectroscopy using the liquid penetration method. The process of water penetration is classically characterized by a two-step increment in the combination bands between OH stretching and bending modes of water; however, only one-step increment in the combination bands was induced by penetration of lactose saturated solution. These results suggest that a first phase occurs in which penetrating water adsorbs to solid lactose surface creating a saturated layer, followed by a second phase of dissolution of the hydrated lactose. Decomposition of differential spectra at 2-min intervals supports the existence of an adsorption-diffusion model and gives a threshold as the amount of adsorbed water to dissolve solid lactose. Copyright © 2012 Elsevier B.V. All rights reserved.

  17. Probing depth and dynamic response of speckles in near infrared region for spectroscopic blood flow imaging

    NASA Astrophysics Data System (ADS)

    Yokoi, Naomichi; Aizu, Yoshihisa

    2016-04-01

    Imaging method based on bio-speckles is a useful means for blood flow visualization of living bodies and, it has been utilized for analyzing the condition or the health state of living bodies. Actually, the sensitivity of blood flow is influenced by tissue optical properties, which depend on the wavelength of illuminating laser light. In the present study, we experimentally investigate characteristics of the blood flow images obtained with two wavelengths of 780 nm and 830 nm in the near-infrared region. Experiments are conducted for sample models using a pork layer, horse blood layer and mirror, and for a human wrist and finger, to investigate optical penetration depth and dynamic response of speckles to the blood flow velocity for two wavelengths.

  18. Reorganizational dynamics of multilamellar lipid bilayer assemblies using continuously scanning Fourier transform infrared spectroscopic imaging.

    PubMed

    Huffman, Scott W; Schlücker, Sebastian; Levin, Ira W

    2004-07-01

    We employ an implementation of rapid-scan Fourier transform infrared (FT-IR) microspectroscopic imaging to acquire time-resolved images for assessing the non-repetitive reorganizational dynamics of aqueous dispersions of multilamellar lipid vesicles (MLVs) derived from distearoylphosphatidylcholine (DSPC). The spatially and temporally resolved images allow direct and simultaneous determinations of various physical and chemical properties of the MLVs, including the main thermal gel to liquid crystalline phase transition, comparisons of vesicle diffusion rates in both phases and the variation in lipid bilayer packing properties between the inner and outer lamellae defining the vesicle. Specifically, in the lipid liquid crystalline phase, the inner bilayers of the MLVs are more intermolecularly ordered than the outer regions, while the intramolecular acyl chain order/disorder parameters, reflecting the overall characteristics of the fluid phase, remain uniform across the vesicle diameter. In contrast, the lipid vesicle gel phase displays no intermolecular or intramolecular dependence as a function of distance from the MLV center.

  19. Lubricants and lubricant additives under shear studied under operating conditions by optical and infrared spectroscopic methods

    SciTech Connect

    Lauer, J.L.; Ahn, Y.

    1988-01-01

    A physical basis was sought for differences in fuel economy with a typical petroleum lube base stock when various additives were present. The kinematic viscosity was maintained at 7.1 cS at 100C by blending. Film thickness, temperature, and traction were determined for a ball/plate contact under elastohydrodynamic conditions. Different additives produces considerably different results. Invariably, small film thicknesses paralleled low temperatures in the conjunction region, low traction and high fuel economy. Zinc dithiophosphate(ZDDP) was unique in that it always increased film thickness, but increased traction only at high loads and low speeds while decreasing it otherwise. Other additives, e.g. friction modifier(FM) and viscosity index(VI)improver and combinations decreased film thickness and traction. To help determine the reasons for these behaviors--whether surface or bulk effects--polarized infrared emission spectra were collected from an operating mock journal bearing.

  20. Near-infrared Spectroscopic Observations of Comet C/2013 R1 (Lovejoy) by WINERED: CN Red-system Band Emission

    NASA Astrophysics Data System (ADS)

    Shinnaka, Yoshiharu; Kawakita, Hideyo; Kondo, Sohei; Ikeda, Yuji; Kobayashi, Naoto; Hamano, Satoshi; Sameshima, Hiroaki; Fukue, Kei; Matsunaga, Noriyuki; Yasui, Chikako; Izumi, Natsuko; Mizumoto, Misaki; Otsubo, Shogo; Takenaka, Keiichi; Watase, Ayaka; Kawanishi, Takafumi; Nakanishi, Kenshi; Nakaoka, Tetsuya

    2017-08-01

    Although high-resolution spectra of the CN red-system band are considered useful in cometary sciences, e.g., in the study of isotopic ratios of carbon and nitrogen in cometary volatiles, there have been few reports to date due to the lack of high-resolution (R ≡ λ/Δλ > 20,000) spectrographs in the near-infrared region around ˜1 μm. Here, we present the high-resolution emission spectrum of the CN red-system band in comet C/2013 R1 (Lovejoy), acquired by the near-infrared high-resolution spectrograph WINERED mounted on the 1.3 m Araki telescope at the Koyama Astronomical Observatory, Kyoto, Japan. We applied our fluorescence excitation models for CN, based on modern spectroscopic studies, to the observed spectrum of comet C/2013 R1 (Lovejoy) to search for CN isotopologues (13C14N and 12C15N). We used a CN fluorescence excitation model involving both a “pure” fluorescence excitation model for the outer coma and a “fully collisional” fluorescence excitation model for the inner coma region. Our emission model could reproduce the observed 12C14N red-system band of comet C/2013 R1 (Lovejoy). The derived mixing ratio between the two excitation models was 0.94(+0.02/-0.03):0.06(+0.03/-0.02), corresponding to the radius of the collision-dominant region of ˜800-1600 km from the nucleus. No isotopologues were detected. The observed spectrum is consistent, within error, with previous estimates in comets of 12C/13C (˜90) and 14N/15N (˜150).

  1. Infrared spectroscopic characterization of dehydration and accompanying phase transition behaviors in NAT-topology zeolites

    SciTech Connect

    Wang, Hsiu-Wen; Bishop, David

    2012-01-01

    Relative humidity (PH2O, partial pressure of water)-dependent dehydration and accompanying phase transitions in NAT-topology zeolites (natrolite, scolecite, and mesolite) were studied under controlled temperature and known PH2O conditions by in situ diffuse-reflectance infrared Fourier transform spectroscopy and parallel X-ray powder diffraction. Dehydration was characterized by the disappearance of internal H2O vibrational modes. The loss of H2O molecules caused a sequence of structural transitions in which the host framework transformation path was coupled primarily via the thermal motion of guest Na?/Ca2? cations and H2O molecules. The observation of different interactions of H2O molecules and Na?/Ca2? cations with host aluminosilicate frameworks under highand low-PH2O conditions indicated the development of different local strain fields, arising from cation H2O interactions in NAT-type channels. These strain fields influence the Si O/Al O bond strength and tilting angles within and between tetrahedra as the dehydration temperature is approached. The newly observed infrared bands (at 2,139 cm-1 in natrolite, 2,276 cm-1 in scolecite, and 2,176 and 2,259 cm-1 in mesolite) result from strong cation H2O Al Si framework interactions in NAT-type channels, and these bands can be used to evaluate the energetic evolution of Na?/Ca2? cations before and after phase transitions, especially for scolecite and mesolite. The 2,176 and 2,259 cm-1 absorption bands in mesolite also appear to be related to Na?/Ca2? order disorder that occur when mesolite loses its Ow4 H2O molecules.

  2. Infrared spectroscopic characterization of dehydration and accompanying phase transition behaviors in NAT-topology zeolites

    NASA Astrophysics Data System (ADS)

    Wang, Hsiu-Wen; Bish, David L.

    2012-04-01

    Relative humidity ( P_{{{text{H}}_{ 2} {text{O}}}} , partial pressure of water)-dependent dehydration and accompanying phase transitions in NAT-topology zeolites (natrolite, scolecite, and mesolite) were studied under controlled temperature and known P_{{{text{H}}_{ 2} {text{O}}}} conditions by in situ diffuse-reflectance infrared Fourier transform spectroscopy and parallel X-ray powder diffraction. Dehydration was characterized by the disappearance of internal H2O vibrational modes. The loss of H2O molecules caused a sequence of structural transitions in which the host framework transformation path was coupled primarily via the thermal motion of guest Na+/Ca2+ cations and H2O molecules. The observation of different interactions of H2O molecules and Na+/Ca2+ cations with host aluminosilicate frameworks under high- and low- P_{{{text{H}}_{ 2} {text{O}}}} conditions indicated the development of different local strain fields, arising from cation-H2O interactions in NAT-type channels. These strain fields influence the Si-O/Al-O bond strength and tilting angles within and between tetrahedra as the dehydration temperature is approached. The newly observed infrared bands (at 2,139 cm-1 in natrolite, 2,276 cm-1 in scolecite, and 2,176 and 2,259 cm-1 in mesolite) result from strong cation-H2O-Al-Si framework interactions in NAT-type channels, and these bands can be used to evaluate the energetic evolution of Na+/Ca2+ cations before and after phase transitions, especially for scolecite and mesolite. The 2,176 and 2,259 cm-1 absorption bands in mesolite also appear to be related to Na+/Ca2+ order-disorder that occur when mesolite loses its Ow4 H2O molecules.

  3. Mid-infrared spectroscopic assessment of nanotoxicity in gram-negative vs. gram-positive bacteria.

    PubMed

    Heys, Kelly A; Riding, Matthew J; Strong, Rebecca J; Shore, Richard F; Pereira, M Glória; Jones, Kevin C; Semple, Kirk T; Martin, Francis L

    2014-03-07

    Nanoparticles appear to induce toxic effects through a variety of mechanisms including generation of reactive oxygen species (ROS), physical contact with the cell membrane and indirect catalysis due to remnants from manufacture. The development and subsequent increasing usage of nanomaterials has highlighted a growing need to characterize and assess the toxicity of nanoparticles, particularly those that may have detrimental health effects such as carbon-based nanomaterials (CBNs). Due to interactions of nanoparticles with some reagents, many traditional toxicity tests are unsuitable for use with CBNs. Infrared (IR) spectroscopy is a non-destructive, high throughput technique, which is unhindered by such problems. We explored the application of IR spectroscopy to investigate the effects of CBNs on Gram-negative (Pseudomonas fluorescens) and Gram-positive (Mycobacterium vanbaalenii PYR-1) bacteria. Two types of IR spectroscopy were compared: attenuated total reflection Fourier-transform infrared (ATR-FTIR) and synchrotron radiation-based FTIR (SR-FTIR) spectroscopy. This showed that Gram-positive and Gram-negative bacteria exhibit differing alterations when exposed to CBNs. Gram-positive bacteria appear more resistant to these agents and this may be due to the protection afforded by their more sturdy cell wall. Markers of exposure also vary according to Gram status; Amide II was consistently altered in Gram-negative bacteria and carbohydrate altered in Gram-positive bacteria. ATR-FTIR and SR-FTIR spectroscopy could both be applied to extract biochemical alterations induced by each CBN that were consistent across the two bacterial species; these may represent potential biomarkers of nanoparticle-induced alterations. Vibrational spectroscopy approaches may provide a novel means of fingerprinting the effects of CBNs in target cells.

  4. An Overview of Ultraviolet Through Infrared Reflectance Spectroscopic Observations of Mercury During the First MESSENGER Flyby

    NASA Astrophysics Data System (ADS)

    Izenberg, N. R.; McClintock, W. E.; Holsclaw, G. M.; Robinson, M. S.; Blewett, D. T.; Domingue, D. L.; Head, J. W.; Jensen, E. A.; Kochte, M. C.; Lankton, M. R.; Murchie, S. L.; Sprague, A. L.; Vilas, F.; Solomon, S. C.

    2008-05-01

    During the first MESSENGER flyby of Mercury on January 14, 2008, the Mercury Atmospheric and Surface Composition Spectrometer (MASCS) measured reflectance spectra from Mercury's surface over the wavelength range 220-1450 nm. These are the first high-spatial-resolution (<10 km) spectra at any wavelength and the first reported ultraviolet (UV, wavelength < 360 nm) observations of the surface. MASCS observed the sunlit surface for approximately 14 minutes after closest approach, acquiring over 650 spectra with the Visible and Infrared Spectrograph (VIRS) detectors of MASCS sensitive to wavelengths of 350-1450 nm. MASCS also obtained just under four grating scans in the middle ultraviolet (220-320 nm) using MASCS's Ultraviolet and Visible Spectrometer (UVVS) component. Most of the near-equatorial ground track of the observation covered terrain in the previously unseen hemisphere of Mercury but also crossed into the hemisphere viewed by Mariner 10 south of Mozart crater and in Tir Planitia. Ground-based observations of Mercury reveal a surface with a red, nearly featureless spectrum in the visible and near-infrared (wavelengths greater than ~ 500 nm) that has been interpreted as evidence for a largely iron-poor feldspathic composition. Initial analyses of VIRS spectra also show strongly red-sloped, near featureless spectra, appearing to support contentions of low iron abundance in surface materials. However, interpretation of Mercury's spectral reflectance is complicated by our lack of knowledge about the effects on its surface materials of space weathering, which both suppresses the strength of spectral absorption features and reddens the spectrum. Brightness variations and absorption bands in ultraviolet reflectance may help determine both the nature and extent of processes that modify observed reflectance at longer wavelengths. MASCS surface observation data demonstrate spectral variations across the Mercury surface that can be related to previous telescopic

  5. TRANSITIONAL DISKS AND THEIR ORIGINS: AN INFRARED SPECTROSCOPIC SURVEY OF ORION A

    SciTech Connect

    Kim, K. H.; Watson, Dan M.; Manoj, P.; Forrest, W. J.; Arnold, Laura; Najita, Joan; Furlan, Elise; Sargent, Benjamin; Espaillat, Catherine; Muzerolle, James; Megeath, S. T.; Calvet, Nuria; Green, Joel D.

    2013-06-01

    Transitional disks are protoplanetary disks around young stars, with inner holes or gaps which are surrounded by optically thick outer, and often inner, disks. Here we present observations of 62 new transitional disks in the Orion A star-forming region. These were identified using the Spitzer Space Telescope's Infrared Spectrograph and followed up with determinations of stellar and accretion parameters using the Infrared Telescope Facility's SpeX. We combine these new observations with our previous results on transitional disks in Taurus, Chamaeleon I, Ophiuchus, and Perseus, and with archival X-ray observations. This produces a sample of 105 transitional disks of ''cluster'' age 3 Myr or less, by far the largest hitherto assembled. We use this sample to search for trends between the radial structure in the disks and many other system properties, in order to place constraints on the possible origins of transitional disks. We see a clear progression of host-star accretion rate and the different disk morphologies. We confirm that transitional disks with complete central clearings have median accretion rates an order of magnitude smaller than radially continuous disks of the same population. Pre-transitional disks-those objects with gaps that separate inner and outer disks-have median accretion rates intermediate between the two. Our results from the search for statistically significant trends, especially related to M-dot , strongly support that in both cases the gaps are far more likely to be due to the gravitational influence of Jovian planets or brown dwarfs orbiting within the gaps, than to any of the photoevaporative, turbulent, or grain-growth processes that can lead to disk dissipation. We also find that the fraction of Class II YSOs which are transitional disks is large, 0.1-0.2, especially in the youngest associations.

  6. Pb+ irradiation of synthetic zircon (ZrSiO4): Infrared spectroscopic investigation

    SciTech Connect

    Zhang, Ming; Boatner, Lynn A; Salje, Ekhard K.H.; Honda, Shin-ichi; Ewing, Rodney C.

    2008-01-01

    The structural variations of synthetic zircon (ZrSiO{sub 4}) single crystals irradiated at room temperature by 280 keV Pb{sup +} ions (with fluences up to 1 x 10{sup 15} ions/cm{sup 2}) were investigated using infrared (IR) spectroscopy. Like metamict zircon whose crystal structure is damaged and amorphized by naturally occurring {alpha}-decay events, the Pb{sup +}-irradiated zircon crystals show a dramatic decrease in reflectivity. However, no significant decrease in wavenumbers of the stretching vibrations of SiO{sub 4} tetrahedra in zircon was detected. The Pb{sup +}-implanted zircon exhibits new IR bands, indicating irradiation-induced new vibrations or domains, clusters or phases in addition to SiO{sub 2} and ZrO{sub 2}. IR features consistent with those of Pb silicates (with a divalent state, i.e., Pb{sup 2+}) are also found in the irradiated sample. This finding implies that some of the radiogenic Pb in natural zircon might not actually reside in the zircon lattice or in ZrSiO{sub 4} phases, but form new local domains or clusters. Infrared bands of OH-stretching vibrations were also detected in the irradiated synthetic zircon, which was originally free from OH features prior to the irradiation. These results indicate that H can easily diffuse into the irradiated layer or into irradiated-induced phases to form OH or and hydrous species after the irradiated material is damaged. The type and content of hydrous species vary with irradiation fluences.

  7. Automated high-throughput assessment of prostate biopsy tissue using infrared spectroscopic chemical imaging

    NASA Astrophysics Data System (ADS)

    Bassan, Paul; Sachdeva, Ashwin; Shanks, Jonathan H.; Brown, Mick D.; Clarke, Noel W.; Gardner, Peter

    2014-03-01

    Fourier transform infrared (FT-IR) chemical imaging has been demonstrated as a promising technique to complement histopathological assessment of biomedical tissue samples. Current histopathology practice involves preparing thin tissue sections and staining them using hematoxylin and eosin (H&E) after which a histopathologist manually assess the tissue architecture under a visible microscope. Studies have shown that there is disagreement between operators viewing the same tissue suggesting that a complementary technique for verification could improve the robustness of the evaluation, and improve patient care. FT-IR chemical imaging allows the spatial distribution of chemistry to be rapidly imaged at a high (diffraction-limited) spatial resolution where each pixel represents an area of 5.5 × 5.5 μm2 and contains a full infrared spectrum providing a chemical fingerprint which studies have shown contains the diagnostic potential to discriminate between different cell-types, and even the benign or malignant state of prostatic epithelial cells. We report a label-free (i.e. no chemical de-waxing, or staining) method of imaging large pieces of prostate tissue (typically 1 cm × 2 cm) in tens of minutes (at a rate of 0.704 × 0.704 mm2 every 14.5 s) yielding images containing millions of spectra. Due to refractive index matching between sample and surrounding paraffin, minimal signal processing is required to recover spectra with their natural profile as opposed to harsh baseline correction methods, paving the way for future quantitative analysis of biochemical signatures. The quality of the spectral information is demonstrated by building and testing an automated cell-type classifier based upon spectral features.

  8. Interaction between beta-Purothionin and dimyristoylphosphatidylglycerol: a (31)P-NMR and infrared spectroscopic study.

    PubMed Central

    Richard, Julie-Andrée; Kelly, Isabelle; Marion, Didier; Pézolet, Michel; Auger, Michèle

    2002-01-01

    The interaction of beta-purothionin, a small basic and antimicrobial protein from the endosperm of wheat seeds, with multilamellar vesicles of dimyristoylphosphatidylglycerol (DMPG) was investigated by (31)P solid-state NMR and infrared spectroscopy. NMR was used to study the organization and dynamics of DMPG in the absence and presence of beta-purothionin. The results indicate that beta-purothionin does not induce the formation of nonlamellar phases in DMPG. Two-dimensional exchange spectroscopy shows that beta-purothionin decreases the lateral diffusion of DMPG in the fluid phase. Infrared spectroscopy was used to investigate the perturbations, induced by beta-purothionin, of the polar and nonpolar regions of the phospholipid bilayers. At low concentration of beta-purothionin, the temperature of the gel-to-fluid phase transition of DMPG increases from 24 degrees C to ~33 degrees C, in agreement with the formation of electrostatic interactions between the cationic protein and the anionic phospholipid. At higher protein concentration, the lipid transition is slightly shifted toward lower temperature and a second transition is observed below 20 degrees C, suggesting an insertion of the protein in the hydrophobic core of the lipid bilayer. The results also suggest that the presence of beta-purothionin significantly modifies the lipid packing at the surface of the bilayer to increase the accessibility of water molecules in the interfacial region. Finally, orientation measurements indicate that the alpha-helices and the beta-sheet of beta-purothionin have tilt angles of ~60 degrees and 30 degrees, respectively, relative to the normal of the ATR crystal. PMID:12324425

  9. Fourier-transform infrared spectroscopic comparison of cultured human fibroblast and fibrosarcoma cells

    NASA Astrophysics Data System (ADS)

    Yang, Difei; Castro, Dan J.; El-Sayed, Ivan H.; El-Sayed, Mostafa A.; Saxton, Romaine E.; Zhang, Nancy Y.

    1995-05-01

    Infrared vibration spectroscopy appears to be a more powerful technique for diagnosis than visible or UV spectroscopy. Advantages of IR spectra include: 1) vibrational motion has a smaller tissue absorption coefficient than electronic motion, 2) scattering of infrared radiation has a lower cross section than visible or UV light, (these two facts allow deeper penetration of IR radiation) and 3) vibration spectra provide a better fingerprint of chemical groups present in cells than the unresolved broad electronic spectrum of biological molecules. In the present work, Fourier-transform IR spectroscopy was used to compare cultured human fibroblast and malignant fibrosarcoma cells. Significant differences were observed by comparing the spectra of the normal cells with that of the cancer cells. the PO2 symmetric stretching mode at 1082cm-1 in the cancer cell is reduced in intensity. These observations are similar to those reported previously by Wong et al in comparing the IR spectra of pairs of normal and cancerous cells from the colon and cervix. However, the observed increase in the relative intensity of the symmetric to antisymmetric CH3 bending mode are only found in fibrosarcoma and basal cell carcinoma. The decrease in intensity of the CH2 bending mode relative to that of CH3 mode was observed only for fibrosarcoma cells. This finding with paired human fibroblast and fibrosarcoma cells suggests that fatty acid chains or side chains of protein in the cancer cells are partially degraded leading to more terminal carbon. It is also possible that changes in the environment upon carcinogenesis induces a change in the relative absorption cross sections for the CH3 and CH2 bending vibrations.

  10. Vertical profiling of methane and carbon dioxide using high resolution near-infrared heterodyne spectroscopic observations

    NASA Astrophysics Data System (ADS)

    Rodin, Alexander; Klimchuk, Artem; Churbanov, Dmitry; Pereslavtseva, Anastasia; Spiridonov, Maxim; Nadezhdinskyi, Alexander

    2014-05-01

    We present new method of monitoring greenhouse gases using spectroscopic observations of solar radiation passed through the atmosphere with spectral resolution ΛvδΛ up to 108. Such a high resolution is achieved by heterodyne technique and allows to retrieve full information about spectral line shape which, in turn, is used to distinguish contribution of different atmospheric layers to the resulting absorption. Weak absorption line at 6056.5 cm-1 was selected for CO2 measurements and a quartet of lines centered at 6057 cm-1for CH4. The instrument setup includes Sun tracker with a microtelescope and chopper, diode DFB laser used as a local oscillator, a bundle of single mode optical fibers that provides medium for radiation transfer and beam coupling, reference cell with depressurized methane for LO frequency stabilization, and Fabry-Perot etalon for LO frequency calibration. A commercial p-i-n diode with squared detector replaces a mixer and IF spectrometer, providing measurement of heterodyne beating within a bandpass of few MHz, which determines the effective spectral resolution of the instrument. Spectral coverage within narrow range (about 1 cm-1) is provided by ramping the LO frequency based on feedback from the reference channel. Observations of Sun in the Moscow region have resulted for the first time in measurements of the atmospheric transmission near 1.65 μm with sub-Doppler spectral resolution. In order to retrieve vertical profiles of methane and carbon dioxide we developed the inversion algorithm implementing Tikhonov regularization approach. With measured transmission having S/N ratio of 100 or higher, the uncertainty of CH4 profile is about 10 ppb, with the uncertainty of CO2 profile at 1 ppm. This techniques is promising an affordable opportunity or widespread monitoring of greenhouse gases and may be implemented on existing ground-based stations. This work has been supported by the grant of Russian Ministry of education and science #11.G34.31.0074

  11. Fourier transform infra-red spectroscopic signatures for lung cells' epithelial mesenchymal transition: A preliminary report

    NASA Astrophysics Data System (ADS)

    Sarkar, Atasi; Sengupta, Sanghamitra; Mukherjee, Anirban; Chatterjee, Jyotirmoy

    2017-02-01

    Infra red (IR) spectral characterization can provide label-free cellular metabolic signatures of normal and diseased circumstances in a rapid and non-invasive manner. Present study endeavoured to enlist Fourier transform infra red (FTIR) spectroscopic signatures for lung normal and cancer cells during chemically induced epithelial mesenchymal transition (EMT) for which global metabolic dimension is not well reported yet. Occurrence of EMT was validated with morphological and immunocytochemical confirmation. Pre-processed spectral data was analyzed using ANOVA and principal component analysis-linear discriminant analysis (PCA-LDA). Significant differences observed in peak area corresponding to biochemical fingerprint (900-1800 cm- 1) and high wave-number (2800-3800 cm- 1) regions contributed to adequate PCA-LDA segregation of cells undergoing EMT. The findings were validated by re-analysis of data using another in-house built binary classifier namely vector valued regularized kernel approximation (VVRKFA), in order to understand EMT progression. To improve the classification accuracy, forward feature selection (FFS) tool was employed in extracting potent spectral signatures by eliminating undesirable noise. Gradual increase in classification accuracy with EMT progression of both cell types indicated prominence of the biochemical alterations. Rapid changes in cellular metabolome noted in cancer cells within first 24 h of EMT induction along with higher classification accuracy for cancer cell groups in comparison to normal cells might be attributed to inherent differences between them. Spectral features were suggestive of EMT triggered changes in nucleic acid, protein, lipid and bound water contents which can emerge as the useful markers to capture EMT related cellular characteristics.

  12. Fourier transform infra-red spectroscopic signatures for lung cells' epithelial mesenchymal transition: A preliminary report.

    PubMed

    Sarkar, Atasi; Sengupta, Sanghamitra; Mukherjee, Anirban; Chatterjee, Jyotirmoy

    2017-02-15

    Infra red (IR) spectral characterization can provide label-free cellular metabolic signatures of normal and diseased circumstances in a rapid and non-invasive manner. Present study endeavoured to enlist Fourier transform infra red (FTIR) spectroscopic signatures for lung normal and cancer cells during chemically induced epithelial mesenchymal transition (EMT) for which global metabolic dimension is not well reported yet. Occurrence of EMT was validated with morphological and immunocytochemical confirmation. Pre-processed spectral data was analyzed using ANOVA and principal component analysis-linear discriminant analysis (PCA-LDA). Significant differences observed in peak area corresponding to biochemical fingerprint (900-1800cm(-1)) and high wave-number (2800-3800cm(-1)) regions contributed to adequate PCA-LDA segregation of cells undergoing EMT. The findings were validated by re-analysis of data using another in-house built binary classifier namely vector valued regularized kernel approximation (VVRKFA), in order to understand EMT progression. To improve the classification accuracy, forward feature selection (FFS) tool was employed in extracting potent spectral signatures by eliminating undesirable noise. Gradual increase in classification accuracy with EMT progression of both cell types indicated prominence of the biochemical alterations. Rapid changes in cellular metabolome noted in cancer cells within first 24h of EMT induction along with higher classification accuracy for cancer cell groups in comparison to normal cells might be attributed to inherent differences between them. Spectral features were suggestive of EMT triggered changes in nucleic acid, protein, lipid and bound water contents which can emerge as the useful markers to capture EMT related cellular characteristics.

  13. Penetration kinetics of dimethyl sulphoxide and glycerol in dynamic optical clearing of porcine skin tissue in vitro studied by Fourier transform infrared spectroscopic imaging.

    PubMed

    Jiang, Jingying; Boese, Matthias; Turner, Paul; Wang, Ruikang K

    2008-01-01

    By use of a Fourier transform infrared (FTIR) spectroscopic imaging technique, we examine the dynamic optical clearing processes occurring in hyperosmotically biocompatible agents penetrating into skin tissue in vitro. The sequential collection of images in a time series provides an opportunity to assess penetration kinetics of dimethyl sulphoxide (DMSO) and glycerol beneath the surface of skin tissue over time. From 2-D IR spectroscopic images and 3-D false color diagrams, we show that glycerol takes at least 30 min to finally penetrate the layer of epidermis, while DMSO can be detected in epidermis after only 4 min of being topically applied over stratum corneum sides of porcine skin. The results demonstrate the potential of a FTIR spectroscopic imaging technique as an analytical tool for the study of dynamic optical clearing effects when the bio-tissue is impregnated by hyperosmotically biocompatible agents such as glycerol and DMSO.

  14. Molecular Shocks Associated with Massive Young Stars: CO Line Images with a New Far-Infrared Spectroscopic Camera on the Kuiper Airborne Observatory

    NASA Technical Reports Server (NTRS)

    Watson, Dan M.

    1997-01-01

    Under the terms of our contract with NASA Ames Research Center, the University of Rochester (UR) offers the following final technical report on grant NAG 2-958, Molecular shocks associated with massive young stars: CO line images with a new far-infrared spectroscopic camera, given for implementation of the UR Far-Infrared Spectroscopic Camera (FISC) on the Kuiper Airborne Observatory (KAO), and use of this camera for observations of star-formation regions 1. Two KAO flights in FY 1995, the final year of KAO operations, were awarded to this program, conditional upon a technical readiness confirmation which was given in January 1995. The funding period covered in this report is 1 October 1994 - 30 September 1996. The project was supported with $30,000, and no funds remained at the conclusion of the project.

  15. Development of a practical spatial-spectral analysis protocol for breast histopathology using Fourier transform infrared spectroscopic imaging.

    PubMed

    Pounder, F Nell; Reddy, Rohith K; Bhargava, Rohit

    2016-06-23

    Breast cancer screening provides sensitive tumor identification, but low specificity implies that a vast majority of biopsies are not ultimate