Magnetic resonance imaging and image analysis for assessment of HPMC matrix tablets structural evolution in USP Apparatus 4.

PubMed

Kulinowski, Piotr; Dorożyński, Przemysław; Młynarczyk, Anna; Węglarz, Władysław P

2011-05-01

The purpose of the study was to present a methodology for the processing of Magnetic Resonance Imaging (MRI) data for the quantification of the dosage form matrix evolution during drug dissolution. The results of the study were verified by comparison with other approaches presented in literature. A commercially available, HPMC-based quetiapine fumarate tablet was studied with a 4.7T MR system. Imaging was performed inside an MRI probe-head coupled with a flow-through cell for 12 h in circulating water. The images were segmented into three regions using threshold-based segmentation algorithms due to trimodal structure of the image intensity histograms. Temporal evolution of dry glassy, swollen glassy and gel regions was monitored. The characteristic features were observed: initial high expansion rate of the swollen glassy and gel layers due to initial water uptake, dry glassy core disappearance and maximum area of swollen glassy region at 4 h, and subsequent gel layer thickness increase at the expense of swollen glassy layer. The temporal evolution of an HPMC-based tablet by means of noninvasive MRI integrated with USP Apparatus 4 was found to be consistent with both the theoretical model based on polymer disentanglement concentration and experimental VIS/FTIR studies.

Spatio-temporal evolution of perturbations in ensembles initialized by bred, Lyapunov and singular vectors

NASA Astrophysics Data System (ADS)

Pazó, Diego; Rodríguez, Miguel A.; López, Juan M.

2010-05-01

We study the evolution of finite perturbations in the Lorenz ‘96 model, a meteorological toy model of the atmosphere. The initial perturbations are chosen to be aligned along different dynamic vectors: bred, Lyapunov, and singular vectors. Using a particular vector determines not only the amplification rate of the perturbation but also the spatial structure of the perturbation and its stability under the evolution of the flow. The evolution of perturbations is systematically studied by means of the so-called mean-variance of logarithms diagram that provides in a very compact way the basic information to analyse the spatial structure. We discuss the corresponding advantages of using those different vectors for preparing initial perturbations to be used in ensemble prediction systems, focusing on key properties: dynamic adaptation to the flow, robustness, equivalence between members of the ensemble, etc. Among all the vectors considered here, the so-called characteristic Lyapunov vectors are possibly optimal, in the sense that they are both perfectly adapted to the flow and extremely robust.

Spatio-temporal evolution of perturbations in ensembles initialized by bred, Lyapunov and singular vectors

NASA Astrophysics Data System (ADS)

Pazó, Diego; Rodríguez, Miguel A.; López, Juan M.

2010-01-01

We study the evolution of finite perturbations in the Lorenz `96 model, a meteorological toy model of the atmosphere. The initial perturbations are chosen to be aligned along different dynamic vectors: bred, Lyapunov, and singular vectors. Using a particular vector determines not only the amplification rate of the perturbation but also the spatial structure of the perturbation and its stability under the evolution of the flow. The evolution of perturbations is systematically studied by means of the so-called mean-variance of logarithms diagram that provides in a very compact way the basic information to analyse the spatial structure. We discuss the corresponding advantages of using those different vectors for preparing initial perturbations to be used in ensemble prediction systems, focusing on key properties: dynamic adaptation to the flow, robustness, equivalence between members of the ensemble, etc. Among all the vectors considered here, the so-called characteristic Lyapunov vectors are possibly optimal, in the sense that they are both perfectly adapted to the flow and extremely robust.

Temporal evolution of a Current Sheet with Initial Finite Perturbations by Three-dimensional MHD Simulations

NASA Astrophysics Data System (ADS)

Yokoyama, Takaaki

Temporal evolution of a current sheet with initial perturbations is studied by using the threedimensional resistive magnetohydrodynamic (MHD) simulations. The magnetic reconnection is considered to be the main engine of the energy rele ase in solar flares. The structure of the diffusion region is, however, not stil l understood under the circumstances with enormously large magnetic Reynolds num ber as the solar corona. In particular, the relationship between the flare's macroscopic physics and the microscopic ones are unclear. It is generally believed that the MHD turbulence s hould play a role in the intermediate scale. The initial current sheet is in an approximately hydromagnetic equilibrium with anti-parallel magnetic field in the y-direction. We imposed a finite-amplitude perturbations (=50ee what happens. Special attention is paid upon the evolution of a three-dimens ional structure in the direction along the initial electric current (z-direction ). Our preliminary results are as follows: (1) In the early phase of the evolut ion, high wavenumber modes in the z-direction are excited and grow. (2) Many "X "-type neutral points (lines) are generated along the magnetic neutral line (pla ne) in the current sheet. When they evolve into the non-linear phase, three-dime nsional structures in the z-direction also evolve. The spatial scale in the z-di rection seems to be almost comparable with that in the xy-plane. (3) The energy release rate is reduced in case of 3D simulations compared with 2D ones probably because of the reduction of the inflow cross sections by the formation of pattc hy structures in the current sheet.

Temporal evolution of age data under transient pumping conditions

NASA Astrophysics Data System (ADS)

Leray, S.; de Dreuzy, J.-R.; Aquilina, L.; Vergnaud-Ayraud, V.; Labasque, T.; Bour, O.; Le Borgne, T.

2014-04-01

While most age data derived from tracers have been analyzed in steady-state flow conditions, we determine their temporal evolution when starting a pumping. Our study is based on a model made up of a shallowly dipping aquifer overlain by a less permeable aquitard characteristic of the crystalline aquifer of Plœmeur (Brittany, France). Under a pseudo transient flow assumption (instantaneous shift between two steady-state flow fields), we solve the transport equation with a backward particle-tracking method and determine the temporal evolution of the concentrations at the pumping well of CFC-11, CFC-12, CFC-113 and SF6. Apparent ages evolve because of the modifications of the flow pattern and because of the non-linear evolution of the tracer atmospheric concentrations. To identify the respective role of these two causes, we propose two successive analyses. We first convolute residence time distributions initially arising at different times at the same sampling time. We secondly convolute one residence time distribution at various sampling times. We show that flow pattern modifications control the apparent ages evolution in the first pumping year when the residence time distribution is modified from a piston-like distribution to a much broader distribution. In the first pumping year, the apparent age evolution contains transient information that can be used to better constrain hydrogeological systems and slightly compensate for the small number of tracers. Later, the residence time distribution hardly evolves and apparent ages only evolve because of the tracer atmospheric concentrations. In this phase, apparent age time-series do not reflect any evolution in the flow pattern.

Temporal evolution of age data under transient pumping conditions

NASA Astrophysics Data System (ADS)

Leray, S.; De Dreuzy, J.; Aquilina, L.; Vergnaud, V.; Labasque, T.; Bour, O.; Le Borgne, T.

2013-12-01

While most age data derived from tracers have been analyzed in steady-state flow conditions, we determine their temporal evolution under transient pumping conditions. Starting pumping in a well modifies the natural flow patterns induced by the topographical gradient to a mainly convergent flow to the well. Our study is based on a set of models made up of a shallowly dipping aquifer overlain by a less permeable aquitard. These settings are characteristic of the crystalline aquifer of Plœmeur (Brittany, France) located in a highly fractured zone at the contact between a granite and micaschists. Under a pseudo steady-state flow assumption (instantaneous shift between two steady-state flow fields), we solve the transport equation with a backward particle-tracking method and determine the temporal evolution of the concentrations at the pumping well of the four atmospheric tracers CFC 11, CFC 12, CFC 113 and SF6. We show that apparent ages deduced from these concentrations evolve both because of the flow patterns modifications and because of the non-linear evolution of the atmospheric tracer concentrations. Flow patterns modifications only intervene just after the start of pumping, when the initially piston-like residence time distribution is transformed to a broader distribution mixing residence times from a wide variety of flow lines. Later, while flow patterns and the supplying volume of the pumping well still evolve, the residence time distributions are hardly modified and apparent ages are solely altered by the non-linear atmospheric tracer concentrations that progressively modifies the weighting of the residence time distribution. These results are confirmed by the observations at the site of Plœmeur in the pumping area. First, long term chloride observations confirm the quick evolution of the flow patterns after the start of pumping. Second, posterior and more recent evolutions of apparent ages derived from CFCs are consistent with the modeling results revealing in turn the marginal effect of the 20-year pumping on the first 70 years of the residence time distribution. We conclude that the temporal evolution of apparent ages should be used with great care for identifying the temporal evolution of the flow patterns as the apparent age evolution can have two sources - the transient flow patterns and transient tracer atmospheric concentrations. We argue that both evolutions either controlled by transient flow patterns or by transient tracer atmospheric concentrations provide key information that can be further used for the characterization of the hydrogeological system. This study illustrates that the temporal evolution of apparent ages could be used for models segregation and slightly compensate for the small number of tracers.

New robust algorithm for tracking cells in videos of Drosophila morphogenesis based on finding an ideal path in segmented spatio-temporal cellular structures.

PubMed

Bellaïche, Yohanns; Bosveld, Floris; Graner, François; Mikula, Karol; Remesíková, Mariana; Smísek, Michal

2011-01-01

In this paper, we present a novel algorithm for tracking cells in time lapse confocal microscopy movie of a Drosophila epithelial tissue during pupal morphogenesis. We consider a 2D + time video as a 3D static image, where frames are stacked atop each other, and using a spatio-temporal segmentation algorithm we obtain information about spatio-temporal 3D tubes representing evolutions of cells. The main idea for tracking is the usage of two distance functions--first one from the cells in the initial frame and second one from segmented boundaries. We track the cells backwards in time. The first distance function attracts the subsequently constructed cell trajectories to the cells in the initial frame and the second one forces them to be close to centerlines of the segmented tubular structures. This makes our tracking algorithm robust against noise and missing spatio-temporal boundaries. This approach can be generalized to a 3D + time video analysis, where spatio-temporal tubes are 4D objects.

Dynamics of Surfactant Clustering at Interfaces and Its Influence on the Interfacial Tension: Atomistic Simulation of a Sodium Hexadecane-Benzene Sulfonate-Tetradecane-Water System.

PubMed

Paredes, Ricardo; Fariñas-Sánchez, Ana Isabel; Medina-Rodrı Guez, Bryan; Samaniego, Samantha; Aray, Yosslen; Álvarez, Luis Javier

2018-03-06

The process of equilibration of the tetradecane-water interface in the presence of sodium hexadecane-benzene sulfonate is studied using intensive atomistic molecular dynamics simulations. Starting as an initial point with all of the surfactants at the interface, it is obtained that the equilibration time of the interface (several microseconds) is orders of magnitude higher than previously reported simulated times. There is strong evidence that this slow equilibration process is due to the aggregation of surfactants molecules on the interface. To determine this fact, temporal evolution of interfacial tension and interfacial formation energy are studied and their temporal variations are correlated with cluster formation. To study cluster evolution, the mean cluster size and the probability that a molecule of surfactant chosen at random is free are obtained as a function of time. Cluster size distribution is estimated, and it is observed that some of the molecules remain free, whereas the rest agglomerate. Additionally, the temporal evolution of the interfacial thickness and the structure of the surfactant molecules on the interface are studied. It is observed how this structure depends on whether the molecules agglomerate or not.

Evolution of the Orszag-Tang vortex system in a compressible medium. II - Supersonic flow

NASA Technical Reports Server (NTRS)

Picone, J. Michael; Dahlburg, Russell B.

1991-01-01

A study is presented on the effect of embedded supersonic flows and the resulting emerging shock waves on phenomena associated with MHD turbulence, including reconnection, the formation of current sheets and vortex structures, and the evolution of spatial and temporal correlations among physical variables. A two-dimensional model problem, the Orszag-Tang (1979) vortex system, is chosen, which involves decay from nonrandom initial conditions. The system is doubly periodic, and the initial conditions consist of single-mode solenoidal velocity and magnetic fields, each containing X points and O points. The initial mass density is flat, and the initial pressure fluctuations are incompressible, balancing the local forces for a magnetofluid of unit mass density. Results on the evolution of the local structure of the flow field, the global properties of the system, and spectral correlations are presented. The important dynamical properties and observational consequences of embedded supersonic regions and emerging shocks in the Orszag-Tang model of an MHD system undergoing reconnection are discussed. Conclusions are drawn regarding the effects of local supersonic regions on MHD turbulence.

Ship wakes and their manifestations on the sea surface

NASA Astrophysics Data System (ADS)

Ermakov, Stanislav; Kapustin, Ivan; Kalimulin, Rashid

2013-04-01

Spatial/temporal evolution of turbulence generated by surface ships and the effect of the wake on short wind waves has been studied on the Black Sea and on the Gorky Water Reservoir. Measurements of currents in ship wakes were conducted using an Acoustic Doppler Current Profiler deployed from a motor boat. It was obtained that the temporal/spatial evolution of the wake width could be described approximately by a 0.4-power dependence, and the wake depth remained nearly constant at its initial stage. This allowed one to consider the wake widening as a one-dimensional process. We have developed a simple one-dimensional model of ship wake evolution using a semi-empirical theory of turbulence, and the initial stage of the wake widening (when neglecting dissipation) was described by the equation of turbulent energy balance with the pulse initial condition. Mean circulating currents in the wake zone resulting in the wind wave intensification ("suloi" areas) at the boundaries of the wake were detected in experiment. The asymmetry of the "suloi" bands was observed when the wind was blowing nearly perpendicular to the wake axis. It was shown that the later stage of the wake evolution is characterized by the formation of slick bands at the edges of the wake. The slick bands is a result of the transport of surfactants to the water surface by air bubbles in the wake and their compression due to the mean circulating currents. The work was supported by RFBR (projects 12-05-31237, 11-05-00295), the Program RAN Radiophysics, and by the Russian Government (Grants No. 11.G34.31.0048 and 11.G34.31.0078).

Characteristics and evolution of the ecosystem of software tools supporting research in molecular biology.

PubMed

Pazos, Florencio; Chagoyen, Monica

2018-01-16

Daily work in molecular biology presently depends on a large number of computational tools. An in-depth, large-scale study of that 'ecosystem' of Web tools, its characteristics, interconnectivity, patterns of usage/citation, temporal evolution and rate of decay is crucial for understanding the forces that shape it and for informing initiatives aimed at its funding, long-term maintenance and improvement. In particular, the long-term maintenance of these tools is compromised because of their specific development model. Hundreds of published studies become irreproducible de facto, as the software tools used to conduct them become unavailable. In this study, we present a large-scale survey of >5400 publications describing Web servers within the two main bibliographic resources for disseminating new software developments in molecular biology. For all these servers, we studied their citation patterns, the subjects they address, their citation networks and the temporal evolution of these factors. We also analysed how these factors affect the availability of these servers (whether they are alive). Our results show that this ecosystem of tools is highly interconnected and adapts to the 'trendy' subjects in every moment. The servers present characteristic temporal patterns of citation/usage, and there is a worrying rate of server 'death', which is influenced by factors such as the server popularity and the institutions that hosts it. These results can inform initiatives aimed at the long-term maintenance of these resources. © The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

A high-order gas-kinetic Navier-Stokes flow solver

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li Qibing, E-mail: lqb@tsinghua.edu.c; Xu Kun, E-mail: makxu@ust.h; Fu Song, E-mail: fs-dem@tsinghua.edu.c

2010-09-20

The foundation for the development of modern compressible flow solver is based on the Riemann solution of the inviscid Euler equations. The high-order schemes are basically related to high-order spatial interpolation or reconstruction. In order to overcome the low-order wave interaction mechanism due to the Riemann solution, the temporal accuracy of the scheme can be improved through the Runge-Kutta method, where the dynamic deficiencies in the first-order Riemann solution is alleviated through the sub-step spatial reconstruction in the Runge-Kutta process. The close coupling between the spatial and temporal evolution in the original nonlinear governing equations seems weakened due to itsmore » spatial and temporal decoupling. Many recently developed high-order methods require a Navier-Stokes flux function under piece-wise discontinuous high-order initial reconstruction. However, the piece-wise discontinuous initial data and the hyperbolic-parabolic nature of the Navier-Stokes equations seem inconsistent mathematically, such as the divergence of the viscous and heat conducting terms due to initial discontinuity. In this paper, based on the Boltzmann equation, we are going to present a time-dependent flux function from a high-order discontinuous reconstruction. The theoretical basis for such an approach is due to the fact that the Boltzmann equation has no specific requirement on the smoothness of the initial data and the kinetic equation has the mechanism to construct a dissipative wave structure starting from an initially discontinuous flow condition on a time scale being larger than the particle collision time. The current high-order flux evaluation method is an extension of the second-order gas-kinetic BGK scheme for the Navier-Stokes equations (BGK-NS). The novelty for the easy extension from a second-order to a higher order is due to the simple particle transport and collision mechanism on the microscopic level. This paper will present a hierarchy to construct such a high-order method. The necessity to couple spatial and temporal evolution nonlinearly in the flux evaluation can be clearly observed through the numerical performance of the scheme for the viscous flow computations.« less

Numerical studies on alpha production from high energy proton beam interaction with Boron

NASA Astrophysics Data System (ADS)

Moustaizis, S. D.; Lalousis, P.; Hora, H.; Korn, G.

2017-05-01

Numerical investigations on high energy proton beam interaction with high density Boron plasma allows to simulate conditions concerning the alpha production from recent experimental measurements . The experiments measure the alpha production due to p11B nuclear fusion reactions when a laser-driven high energy proton beam interacts with Boron plasma produced by laser beam interaction with solid Boron. The alpha production and consequently the efficiency of the process depends on the initial proton beam energy, proton beam density, the Boron plasma density and temperature, and their temporal evolution. The main advantage for the p11B nuclear fusion reaction is the production of three alphas with total energy of 8.9 MeV, which could enhance the alpha heating effect and improve the alpha production. This particular effect is termed in the international literature as the alpha avalanche effect. Numerical results using a multi-fluid, global particle and energy balance, code shows the alpha production efficiency as a function of the initial energy of the proton beam, the Boron plasma density, the initial Boron plasma temperature and the temporal evolution of the plasma parameters. The simulations enable us to determine the interaction conditions (proton beam - B plasma) for which the alpha heating effect becomes important.

On the temporal evolution of long-wavelength mantle structure of the Earth since the early Paleozoic

NASA Astrophysics Data System (ADS)

Zhong, Shijie; Rudolph, Maxwell L.

2015-05-01

The seismic structure of the Earth's lower mantle is characterized by a dominantly degree-2 pattern with the African and Pacific large low shear velocity provinces (i.e., LLSVP) that are separated by circum-Pacific seismically fast anomalies. It is important to understand the origin of such a degree-2 mantle structure and its temporal evolution. In this study, we investigated the effects of plate motion history and mantle viscosity on the temporal evolution of the lower mantle structure since the early Paleozoic by formulating 3-D spherical shell models of thermochemical convection. For convection models with realistic mantle viscosity and no initial structure, it takes about ˜50 Myr to develop dominantly degree-2 lower mantle structure using the published plate motion models for the last either 120 Ma or 250 Ma. However, it takes longer time to develop the mantle structure for more viscous mantle. While the circum-Pangea subduction in plate motion history models promotes the formation of degree-2 mantle structure, the published pre-Pangea plate motions before 330 Ma produce relatively cold lower mantle in the African hemisphere and significant degree-1 structure in the early Pangea (˜300 Ma) or later times, even if the lower mantle has an initially degree-2 structure and a viscosity as high as 1023 Pas. This suggests that the African LLSVP may not be stationary since the early Paleozoic. With the published plate motion models and lower mantle viscosity of 1022 Pas, our mantle convection models suggest that the present-day degree-2 mantle structure may have largely been formed by ˜200 Ma.

On the Time Evolution of Gamma-Ray Burst Pulses: A Self-Consistent Description.

PubMed

Ryde; Svensson

2000-01-20

For the first time, the consequences of combining two well-established empirical relations that describe different aspects of the spectral evolution of observed gamma-ray burst (GRB) pulses are explored. These empirical relations are (1) the hardness-intensity correlation and (2) the hardness-photon fluence correlation. From these we find a self-consistent, quantitative, and compact description for the temporal evolution of pulse decay phases within a GRB light curve. In particular, we show that in the case in which the two empirical relations are both valid, the instantaneous photon flux (intensity) must behave as 1&solm0;&parl0;1+t&solm0;tau&parr0;, where tau is a time constant that can be expressed in terms of the parameters of the two empirical relations. The time evolution is fully defined by two initial constants and two parameters. We study a complete sample of 83 bright GRB pulses observed by the Compton Gamma-Ray Observatory and identify a major subgroup of GRB pulses ( approximately 45%) which satisfy the spectral-temporal behavior described above. In particular, the decay phase follows a reciprocal law in time. It is unclear what physics causes such a decay phase.

A Hybrid Forward-Adjoint Data Assimilation Method for Reconstructing the Temporal Evolution of Mantle Dynamics

NASA Astrophysics Data System (ADS)

Zhou, Q.; Liu, L.

2017-12-01

Quantifying past mantle dynamic processes represents a major challenge in understanding the temporal evolution of the solid earth. Mantle convection modeling with data assimilation is one of the most powerful tools to investigate the dynamics of plate subduction and mantle convection. Although various data assimilation methods, both forward and inverse, have been created, these methods all have limitations in their capabilities to represent the real earth. Pure forward models tend to miss important mantle structures due to the incorrect initial condition and thus may lead to incorrect mantle evolution. In contrast, pure tomography-based models cannot effectively resolve the fine slab structure and would fail to predict important subduction-zone dynamic processes. Here we propose a hybrid data assimilation method that combines the unique power of the sequential and adjoint algorithms, which can properly capture the detailed evolution of the downgoing slab and the tomographically constrained mantle structures, respectively. We apply this new method to reconstructing mantle dynamics below the western U.S. while considering large lateral viscosity variations. By comparing this result with those from several existing data assimilation methods, we demonstrate that the hybrid modeling approach recovers the realistic 4-D mantle dynamics to the best.

Star formation in a hierarchical model for Cloud Complexes

NASA Astrophysics Data System (ADS)

Sanchez, N.; Parravano, A.

The effects of the external and initial conditions on the star formation processes in Molecular Cloud Complexes are examined in the context of a schematic model. The model considers a hierarchical system with five predefined phases: warm gas, neutral gas, low density molecular gas, high density molecular gas and protostars. The model follows the mass evolution of each substructure by computing its mass exchange with their parent and children. The parent-child mass exchange depends on the radiation density at the interphase, which is produced by the radiation coming from the stars that form at the end of the hierarchical structure, and by the external radiation field. The system is chaotic in the sense that its temporal evolution is very sensitive to small changes in the initial or external conditions. However, global features such as the star formation efficience and the Initial Mass Function are less affected by those variations.

Dynamic evolutionary change in post-Paleozoic echinoids and the importance of scale when interpreting changes in rates of evolution.

PubMed

Hopkins, Melanie J; Smith, Andrew B

2015-03-24

How ecological and morphological diversity accrues over geological time has been much debated by paleobiologists. Evidence from the fossil record suggests that many clades reach maximal diversity early in their evolutionary history, followed by a decline in evolutionary rates as ecological space fills or due to internal constraints. Here, we apply recently developed methods for estimating rates of morphological evolution during the post-Paleozoic history of a major invertebrate clade, the Echinoidea. Contrary to expectation, rates of evolution were lowest during the initial phase of diversification following the Permo-Triassic mass extinction and increased over time. Furthermore, although several subclades show high initial rates and net decreases in rates of evolution, consistent with "early bursts" of morphological diversification, at more inclusive taxonomic levels, these bursts appear as episodic peaks. Peak rates coincided with major shifts in ecological morphology, primarily associated with innovations in feeding strategies. Despite having similar numbers of species in today's oceans, regular echinoids have accrued far less morphological diversity than irregular echinoids due to lower intrinsic rates of morphological evolution and less morphological innovation, the latter indicative of constrained or bounded evolution. These results indicate that rates of evolution are extremely heterogenous through time and their interpretation depends on the temporal and taxonomic scale of analysis.

Deriving urban dynamic evolution rules from self-adaptive cellular automata with multi-temporal remote sensing images

NASA Astrophysics Data System (ADS)

He, Yingqing; Ai, Bin; Yao, Yao; Zhong, Fajun

2015-06-01

Cellular automata (CA) have proven to be very effective for simulating and predicting the spatio-temporal evolution of complex geographical phenomena. Traditional methods generally pose problems in determining the structure and parameters of CA for a large, complex region or a long-term simulation. This study presents a self-adaptive CA model integrated with an artificial immune system to discover dynamic transition rules automatically. The model's parameters are allowed to be self-modified with the application of multi-temporal remote sensing images: that is, the CA can adapt itself to the changed and complex environment. Therefore, urban dynamic evolution rules over time can be efficiently retrieved by using this integrated model. The proposed AIS-based CA model was then used to simulate the rural-urban land conversion of Guangzhou city, located in the core of China's Pearl River Delta. The initial urban land was directly classified from TM satellite image in the year 1990. Urban land in the years 1995, 2000, 2005, 2009 and 2012 was correspondingly used as the observed data to calibrate the model's parameters. With the quantitative index figure of merit (FoM) and pattern similarity, the comparison was further performed between the AIS-based model and a Logistic CA model. The results indicate that the AIS-based CA model can perform better and with higher precision in simulating urban evolution, and the simulated spatial pattern is closer to the actual development situation.

Environment overwhelms both nature and nurture in a model spin glass

NASA Astrophysics Data System (ADS)

Middleton, A. Alan; Yang, Jie

We are interested in exploring what information determines the particular history of the glassy long term dynamics in a disordered material. We study the effect of initial configurations and the realization of stochastic dynamics on the long time evolution of configurations in a two-dimensional Ising spin glass model. The evolution of nearest neighbor correlations is computed using patchwork dynamics, a coarse-grained numerical heuristic for temporal evolution. The dependence of the nearest neighbor spin correlations at long time on both initial spin configurations and noise histories are studied through cross-correlations of long-time configurations and the spin correlations are found to be independent of both. We investigate how effectively rigid bond clusters coarsen. Scaling laws are used to study the convergence of configurations and the distribution of sizes of nearly rigid clusters. The implications of the computational results on simulations and phenomenological models of spin glasses are discussed. We acknowledge NSF support under DMR-1410937 (CMMT program).

Temporal characteristics of gustatory responses in rat parabrachial neurons vary by stimulus and chemosensitive neuron type.

PubMed

Geran, Laura; Travers, Susan

2013-01-01

It has been demonstrated that temporal features of spike trains can increase the amount of information available for gustatory processing. However, the nature of these temporal characteristics and their relationship to different taste qualities and neuron types are not well-defined. The present study analyzed the time course of taste responses from parabrachial (PBN) neurons elicited by multiple applications of "sweet" (sucrose), "salty" (NaCl), "sour" (citric acid), and "bitter" (quinine and cycloheximide) stimuli in an acute preparation. Time course varied significantly by taste stimulus and best-stimulus classification. Across neurons, the ensemble code for the three electrolytes was similar initially but quinine diverged from NaCl and acid during the second 500 ms of stimulation and all four qualities became distinct just after 1s. This temporal evolution was reflected in significantly broader tuning during the initial response. Metric space analyses of quality discrimination by individual neurons showed that increases in information (H) afforded by temporal factors was usually explained by differences in rate envelope, which had a greater impact during the initial 2s (22.5% increase in H) compared to the later response (9.5%). Moreover, timing had a differential impact according to cell type, with between-quality discrimination in neurons activated maximally by NaCl or citric acid most affected. Timing was also found to dramatically improve within-quality discrimination (80% increase in H) in neurons that responded optimally to bitter stimuli (B-best). Spikes from B-best neurons were also more likely to occur in bursts. These findings suggest that among PBN taste neurons, time-dependent increases in mutual information can arise from stimulus- and neuron-specific differences in response envelope during the initial dynamic period. A stable rate code predominates in later epochs.

Temporal Characteristics of Gustatory Responses in Rat Parabrachial Neurons Vary by Stimulus and Chemosensitive Neuron Type

PubMed Central

Geran, Laura; Travers, Susan

2013-01-01

It has been demonstrated that temporal features of spike trains can increase the amount of information available for gustatory processing. However, the nature of these temporal characteristics and their relationship to different taste qualities and neuron types are not well-defined. The present study analyzed the time course of taste responses from parabrachial (PBN) neurons elicited by multiple applications of “sweet” (sucrose), “salty” (NaCl), “sour” (citric acid), and “bitter” (quinine and cycloheximide) stimuli in an acute preparation. Time course varied significantly by taste stimulus and best-stimulus classification. Across neurons, the ensemble code for the three electrolytes was similar initially but quinine diverged from NaCl and acid during the second 500ms of stimulation and all four qualities became distinct just after 1s. This temporal evolution was reflected in significantly broader tuning during the initial response. Metric space analyses of quality discrimination by individual neurons showed that increases in information (H) afforded by temporal factors was usually explained by differences in rate envelope, which had a greater impact during the initial 2s (22.5% increase in H) compared to the later response (9.5%). Moreover, timing had a differential impact according to cell type, with between-quality discrimination in neurons activated maximally by NaCl or citric acid most affected. Timing was also found to dramatically improve within-quality discrimination (80% increase in H) in neurons that responded optimally to bitter stimuli (B-best). Spikes from B-best neurons were also more likely to occur in bursts. These findings suggest that among PBN taste neurons, time-dependent increases in mutual information can arise from stimulus- and neuron-specific differences in response envelope during the initial dynamic period. A stable rate code predominates in later epochs. PMID:24124597

Firework Model: Time Dependent Spectral Evolution of GRB

NASA Astrophysics Data System (ADS)

Barbiellini, Guido; Longo, Francesco; Ghirlanda, G.; Celotti, A.; Bosnjak, Z.

2004-09-01

The energetics of the long duration GRB phenomenon is compared with models of a rotating BH in a strong magnetic field generated by an accreting torus. The GRB energy emission is attributed to magnetic field vacuum breakdown that gives origin to a e +/- fireball. Its subsequent evolution is hypothesized in analogy with the in-flight decay of an elementary particle. An anisotropy in the fireball propagation is thus naturally produced. The recent discovery in some GRB of an initial phase characterized by a thermal spectrum could be interpreted as the photon emission of the fireball photosphere when it becomes transparent. In particular, the temporal evolution of the emission can be explained as the effect of a radiative deceleration of the out-moving ejecta.

Dynamic evolutionary change in post-Paleozoic echinoids and the importance of scale when interpreting changes in rates of evolution

PubMed Central

Hopkins, Melanie J.; Smith, Andrew B.

2015-01-01

How ecological and morphological diversity accrues over geological time has been much debated by paleobiologists. Evidence from the fossil record suggests that many clades reach maximal diversity early in their evolutionary history, followed by a decline in evolutionary rates as ecological space fills or due to internal constraints. Here, we apply recently developed methods for estimating rates of morphological evolution during the post-Paleozoic history of a major invertebrate clade, the Echinoidea. Contrary to expectation, rates of evolution were lowest during the initial phase of diversification following the Permo-Triassic mass extinction and increased over time. Furthermore, although several subclades show high initial rates and net decreases in rates of evolution, consistent with “early bursts” of morphological diversification, at more inclusive taxonomic levels, these bursts appear as episodic peaks. Peak rates coincided with major shifts in ecological morphology, primarily associated with innovations in feeding strategies. Despite having similar numbers of species in today’s oceans, regular echinoids have accrued far less morphological diversity than irregular echinoids due to lower intrinsic rates of morphological evolution and less morphological innovation, the latter indicative of constrained or bounded evolution. These results indicate that rates of evolution are extremely heterogenous through time and their interpretation depends on the temporal and taxonomic scale of analysis. PMID:25713369

Nonlinear evolution of Benjamin-Feir wave group based on third order solution of Benjamin-Bona-Mahony equation

NASA Astrophysics Data System (ADS)

Zahnur; Halfiani, Vera; Salmawaty; Tulus; Ramli, Marwan

2018-01-01

This study concerns on the evolution of trichromatic wave group. It has been known that the trichromatic wave group undergoes an instability during its propagation, which results wave deformation and amplification on the waves amplitude. The previous results on the KdV wave group showed that the nonlinear effect will deform the wave and lead to large wave whose amplitude is higher than the initial input. In this study we consider the Benjamin-Bona-Mahony equation and the theory of third order side band approximation to investigate the peaking and splitting phenomena of the wave groups which is initially in trichromatic signal. The wave amplitude amplification and the maximum position will be observed through a quantity called Maximal Temporal Amplitude (MTA) which measures the maximum amplitude of the waves over time.

Single-Walled Carbon Nanotubes, Carbon Nanofibers and Laser-Induced Incandescence

NASA Technical Reports Server (NTRS)

Schubert, Kathy (Technical Monitor); VanderWal, Randy L.; Ticich, Thomas M.; Berger, Gordon M.; Patel, Premal D.

2004-01-01

Laser induced incandescence applied to a heterogeneous, multi-element reacting flows is characterized by a) temporally resolved emission spectra, time-resolved emission at selected detection wavelengths and fluence dependence. Laser fluences above 0.6 Joules per square centimeter at 1064 nm initiate laser-induced vaporization, yielding a lower incandescence intensity, as found through fluence dependence measurements. Spectrally derived temperatures show that values of excitation laser fluence beyond this value lead to a super-heated plasma, well above the vaporization of temperature of carbon. The temporal evolution of the emission signal at these fluences is consistent with plasma dissipation processes, not incandescence from solid-like structures.

Generation of straight-line shifting bright-dark soliton trains with a wide dip in the symmetric center or dark solitons in optical fibers

NASA Astrophysics Data System (ADS)

Zhong, Xianqiong; Yao, Na; Sheng, Jia'nan; Cheng, Ke

2018-02-01

Nonlinear evolutions of dark soliton pulses with initially constant frequency chirps are investigated numerically for different soliton orders and chirp parameters in different dispersion regimes of optical fibers. The results show interestingly that, in the normal dispersion regime, the evolution properties remain unchanged apart from their straight-line shifts of the temporal trajectories compared with the chirp-free case. While in the anomalous dispersion regime, the dark solitons can evolve to bright-dark soliton trains with a wide black soliton in the symmetric center. The longer the distance, the more the pulse number. The larger the soliton order, the more the pulse number at the same distance. Similarly, straight-line shift of the temporal trajectory of the bright-dark soliton trains will also appear. The shifting amount and direction depend on the absolute value and the sign of the chirp parameter, respectively. This result inspires people to generate bright-dark soliton trains by using ordinary passive optical fibers instead of fiber lasers. Besides, this work also provides us an alternative approach to guide the formed solitons or soliton trains to move their temporal trajectories along straight lines.

Temporal evolution of near-surface chlorophyll over cyclonic eddy lifecycles in the southeastern Pacific

NASA Astrophysics Data System (ADS)

Huang, Jie; Xu, Fanghua; Zhou, Kuanbo; Xiu, Peng; Lin, Yanluan

2017-08-01

Temporal evolution of near-surface chlorophyll (CHL) associated with mesoscale eddies over entire eddy lifespan is complicated. Based on satellite measurements and a reanalysis data set, we identify and quantify major temporal and spatial CHL responses in cyclonic eddies in the southeastern Pacific, and explore the associated mechanisms. Only few temporal CHL variations can be directly linked to the four primary mechanisms: "eddy pumping," "eddy trapping," "eddy stirring," and "eddy-induced Ekman pumping." About 80% of the temporal CHL variations are too complex to be explained by a single mechanism. Five characteristic CHL responses, including classic dipoles (CD), positive-dominant dipoles (PD), negative-dominant dipoles (ND), positive monopoles (PM), and negative monopoles (NM) are identified using the self-organizing map (SOM). CD, a dominant response induced primarily by "eddy stirring," has a continued increasing of frequency of occurrence with time, although its contribution to the total CHL variability remains low. As the secondary prominent response, NM has two peaks of frequency of occurrence at eddy formation and maturation stages, mainly accounted by "eddy trapping" after eddy breakup and "eddy-induced Ekman pumping," respectively. The sum of frequency of occurrence of PD and PM are comparable to that of NM. The initial positive CHL at eddy formation stage is associated with "eddy trapping." The significant positive CHL increase from the eddy intensification to early decay stage is mainly attributed to "eddy pumping." Although the frequency of occurrence of ND is the smallest, its contribution to negative CHL anomalies is unnegligible.

Venus magmatic and tectonic evolution

NASA Technical Reports Server (NTRS)

Phillips, R. J.; Hansen, V. L.

1993-01-01

Two years beyond the initial mapping by the Magellan spacecraft, hypotheses for the magmatic and tectonic evolution of Venus have become refined and focused. We present our view of these processes, attempting to synthesize aspects of a model for the tectonic and magmatic behavior of the planet. The ideas presented should be taken collectively as an hypothesis subject to further testing. The quintessence of our model is that shear and buoyancy forces in the upper boundary layer of mantle convection give rise to a spatially and temporally complex pattern of strain in a one-plate Venusian lithosphere and modulate the timing and occurrence of magmatism on a global basis.

A model for evolution of overlapping community networks

NASA Astrophysics Data System (ADS)

Karan, Rituraj; Biswal, Bibhu

2017-05-01

A model is proposed for the evolution of network topology in social networks with overlapping community structure. Starting from an initial community structure that is defined in terms of group affiliations, the model postulates that the subsequent growth and loss of connections is similar to the Hebbian learning and unlearning in the brain and is governed by two dominant factors: the strength and frequency of interaction between the members, and the degree of overlap between different communities. The temporal evolution from an initial community structure to the current network topology can be described based on these two parameters. It is possible to quantify the growth occurred so far and predict the final stationary state to which the network is likely to evolve. Applications in epidemiology or the spread of email virus in a computer network as well as finding specific target nodes to control it are envisaged. While facing the challenge of collecting and analyzing large-scale time-resolved data on social groups and communities one faces the most basic questions: how do communities evolve in time? This work aims to address this issue by developing a mathematical model for the evolution of community networks and studying it through computer simulation.

The Role of Genetic Drift in Shaping Modern Human Cranial Evolution: A Test Using Microevolutionary Modeling

PubMed Central

Smith, Heather F.

2011-01-01

The means by which various microevolutionary processes have acted in the past to produce patterns of cranial variation that characterize modern humans is not thoroughly understood. Applying a microevolutionary framework, within- and among-population variance/covariance (V/CV) structure was compared for several functional and developmental modules of the skull across a worldwide sample of modern humans. V/CV patterns in the basicranium, temporal bone, and face are proportional within and among groups, which is consistent with a hypothesis of neutral evolution; however, mandibular morphology deviated from this pattern. Degree of intergroup similarity in facial, temporal bone, and mandibular morphology is significantly correlated with geographic distance; however, much of the variance remains unexplained. These findings provide insight into the evolutionary history of modern human cranial variation by identifying signatures of genetic drift, gene flow, and migration and set the stage for inferences regarding selective pressures that early humans encountered since their initial migrations around the world. PMID:21461369

The temporal evolution of the resistive pressure-gradient-driven turbulence and anomalous transport in shear flow across the magnetic field

NASA Astrophysics Data System (ADS)

Lee, Hae June; Mikhailenko, Vladmir; Mikhailenko, Vladimir

2017-10-01

The temporal evolution of the resistive pressure-gradient-driven mode in the sheared flow is investigated by employing the shearing modes approach. It reveals an essential difference in the processes, which occur in the case of the flows with velocity shearing rate less than the growth rate of the instability in the steady plasmas, and in the case of the flows with velocity shear larger than the instability growth rate in steady plasmas. It displays the physical content of the empirical ``quench rule'' which predicts the suppression of the turbulence in the sheared flows when the velocity shearing rate becomes larger than the maximum growth rate of the possible instability. We found that the distortion of the perturbations by the sheared flow with such velocity shear introduces the time dependencies into the governing equations, which prohibits the application of the eigenmodes formalism and requires the solution of the initial value problem.

Temporal Evolution and Dose-Volume Histogram Predictors of Visual Acuity After Proton Beam Radiation Therapy of Uveal Melanoma

DOE Office of Scientific and Technical Information (OSTI.GOV)

Polishchuk, Alexei L.; Mishra, Kavita K., E-mail: Kavita.Mishra@ucsf.edu; Weinberg, Vivian

2017-01-01

Purpose: To perform an in-depth temporal analysis of visual acuity (VA) outcomes after proton beam radiation therapy (PBRT) in a large, uniformly treated cohort of uveal melanoma (UM) patients, to determine trends in VA evolution depending on pretreatment and temporally defined posttreatment VA measurements; and to investigate the relevance of specific patient, tumor and dose-volume parameters to posttreatment vision loss. Methods and Materials: Uveal melanoma patients receiving PBRT were identified from a prospectively maintained database. Included patients (n=645) received 56 GyE in 4 fractions, had pretreatment best corrected VA (BCVA) in the affected eye of count fingers (CF) or better, withmore » posttreatment VA assessment at specified post-PBRT time point(s). Patients were grouped according to the pretreatment BCVA into favorable (≥20/40) or unfavorable (20/50-20/400) and poor (CF) strata. Temporal analysis of BCVA changes was described, and univariate and forward stepwise multivariate logistic regression analyses were performed to identify predictors for VA loss. Results: Median VA follow-up was 53 months (range, 3-213 months). At 60-month follow up, among evaluable treated eyes with favorable pretreatment BCVA, 45% retained BCVA ≥20/40, whereas among evaluable treated eyes with initially unfavorable/poor BCVA, 21% had vision ≥20/100. Among those with a favorable initial BCVA, attaining BCVA of ≥20/40 at any posttreatment time point was associated with subsequent maintenance of excellent BCVA. Multivariate analysis identified volume of the macula receiving 28GyE (P<.0001) and optic nerve (P=.0004) as independent dose-volume histogram predictors of 48-month post-PBRT vision loss among initially favorable treated eyes. Conclusions: Approximately half of PBRT-treated UM eyes with excellent pretreatment BCVA assessed at 5 years after treatment will retain excellent long-term vision. 28GyE macula and optic nerve dose-volume histogram parameters allow for rational treatment planning optimization that may lead to improved visual outcomes. The detailed temporal analysis with intermediate as well as long-term functional prognosis, and the relationship of outcomes with clinical and treatment planning parameters, is critical for informed care of UM patients before and after PBRT.« less

Phase-resolved and time-averaged puff motions of an excited stack-issued transverse jet

NASA Astrophysics Data System (ADS)

Hsu, C. M.; Huang, R. F.

2013-07-01

The dynamics of puff motions in an excited stack-issued transverse jet were studied experimentally in a wind tunnel. The temporal and spatial evolution processes of the puffs induced by acoustic excitation were examined using the smoke flow visualization method and high-speed particle image velocimetry. The temporal and spatial evolutions of the puffs were examined using phase-resolved ensemble-averaged velocity fields and the velocity, length scales, and vorticity characteristics of the puffs were studied. The time-averaged velocity fields were calculated to analyze the velocity distributions and vorticity contours. The results show that a puff consists of a pair of counter-rotating vortex rings. An initial vortex ring was formed due to a concentration of vorticity at the lee side of the issuing jet at the instant of the mid-oscillation cycle. A vortex ring rotating in the opposite direction to that of the initial vortex ring was subsequently formed at the upwind side of the issuing jet. These two counter-rotating vortex rings formed a "mushroom" vortex pair, which was deflected by the crossflow and traveled downstream along a time-averaged trajectory of zero vorticity. The trajectory was situated far above the time-averaged streamline evolving from the leading edge of the tube. The velocity magnitudes of the vortex rings at the upwind and the lee side decreased with time evolution as the puffs traveled downstream due to momentum dissipation and entrainment effects. The puffs traveling along the trajectory of zero vorticity caused large velocities to appear above the leading-edge streamline.

In-process deformation measurements of translucent high speed fibre-reinforced disc rotors

NASA Astrophysics Data System (ADS)

Philipp, Katrin; Filippatos, Angelos; Koukourakis, Nektarios; Kuschmierz, Robert; Leithold, Christoph; Langkamp, Albert; Fischer, Andreas; Czarske, Jürgen

2015-07-01

The high stiffness to weight ratio of glass fibre-reinforced polymers (GFRP) makes them an attractive material for rotors e.g. in the aerospace industry. We report on recent developments towards non-contact, in-situ deformation measurements with temporal resolution up to 200 µs and micron measurement uncertainty. We determine the starting point of damage evolution inside the rotor material through radial expansion measurements. This leads to a better understanding of dynamic material behaviour regarding damage evolution and the prediction of damage initiation and propagation. The measurements are conducted using a novel multi-sensor system consisting of four laser Doppler distance (LDD) sensors. The LDD sensor, a two-wavelength Mach-Zehnder interferometer was already successfully applied for dynamic deformation measurements at metallic rotors. While translucency of the GFRP rotor material limits the applicability of most optical measurement techniques due to speckles from both surface and volume of the rotor, the LDD profits from speckles and is not disturbed by backscattered laser light from the rotor volume. The LDD sensor evaluates only signals from the rotor surface. The anisotropic glass fibre-reinforcement results in a rotationally asymmetric dynamic deformation. A novel signal processing algorithm is applied for the combination of the single sensor signals to obtain the shape of the investigated rotors. In conclusion, the applied multi-sensor system allows high temporal resolution dynamic deformation measurements. First investigations regarding damage evolution inside GFRP are presented as an important step towards a fundamental understanding of the material behaviour and the prediction of damage initiation and propagation.

Spatiotemporal evolution of thin liquid films during impact of water bubbles on glass on a micrometer to nanometer scale.

PubMed

Hendrix, Maurice H W; Manica, Rogerio; Klaseboer, Evert; Chan, Derek Y C; Ohl, Claus-Dieter

2012-06-15

Collisions between millimeter-size bubbles in water against a glass plate are studied using high-speed video. Bubble trajectory and shape are tracked simultaneously with laser interferometry between the glass and bubble surfaces that monitors spatial-temporal evolution of the trapped water film. Initial bubble bounces and the final attachment of the bubble to the surface have been quantified. While the global Reynolds number is large (∼10(2)), the film Reynolds number remains small and permits analysis with lubrication theory with tangentially immobile boundary condition at the air-water interface. Accurate predictions of dimple formation and subsequent film drainage are obtained.

Temporal and spatial foliations of spacetimes.

NASA Astrophysics Data System (ADS)

Herold, H.

For the solution of initial-value problems in numerical relativity usually the (3+1) splitting of Einstein's equations is employed. An important part of this splitting is the choice of the temporal gauge condition. In order to estimate the quality of time-evolution schemes, different time slicings of given well-known spherically symmetric spacetimes have been studied. Besides the maximal slicing condition the harmonic slicing prescription has been used to calculate temporal foliations of the Schwarzschild and the Oppenheimer-Snyder spacetime. Additionally, the author has studied a recently proposed, geometrically motivated spatial gauge condition, which is defined by considering the foliations of the three-dimensional space-like hypersurfaces by 2-surfaces of constant mean extrinsic curvature. Apart from the equations for the shift vector, which can be derived for this gauge condition, he has investigated such spatial foliations for well-known stationary axially symmetric spacetimes, namely for the Kerr metric and for numerically determined solutions for rapidly rotating neutron stars.

Temporal disconnectivity of the energy landscape in glassy systems

NASA Astrophysics Data System (ADS)

Lempesis, Nikolaos; Boulougouris, Georgios C.; Theodorou, Doros N.

2013-03-01

An alternative graphical representation of the potential energy landscape (PEL) has been developed and applied to a binary Lennard-Jones glassy system, providing insight into the unique topology of the system's potential energy hypersurface. With the help of this representation one is able to monitor the different explored basins of the PEL, as well as how - and mainly when - subsets of basins communicate with each other via transitions in such a way that details of the prior temporal history have been erased, i.e., local equilibration between the basins in each subset has been achieved. In this way, apart from detailed information about the structure of the PEL, the system's temporal evolution on the PEL is described. In order to gather all necessary information about the identities of two or more basins that are connected with each other, we consider two different approaches. The first one is based on consideration of the time needed for two basins to mutually equilibrate their populations according to the transition rate between them, in the absence of any effect induced by the rest of the landscape. The second approach is based on an analytical solution of the master equation that explicitly takes into account the entire explored landscape. It is shown that both approaches lead to the same result concerning the topology of the PEL and dynamical evolution on it. Moreover, a "temporal disconnectivity graph" is introduced to represent a lumped system stemming from the initial one. The lumped system is obtained via a specially designed algorithm [N. Lempesis, D. G. Tsalikis, G. C. Boulougouris, and D. N. Theodorou, J. Chem. Phys. 135, 204507 (2011), 10.1063/1.3663207]. The temporal disconnectivity graph provides useful information about both the lumped and the initial systems, including the definition of "metabasins" as collections of basins that communicate with each other via transitions that are fast relative to the observation time. Finally, the two examined approaches are compared to an "on the fly" molecular dynamics-based algorithm [D. G. Tsalikis, N. Lempesis, G. C. Boulougouris, and D. N. Theodorou, J. Chem. Theory Comput. 6, 1307 (2010), 10.1021/ct9004245].

Analysis of the temporal effects on grating evolution in photopolymer

NASA Astrophysics Data System (ADS)

Kelly, John V.; Gleeson, Michael R.; Close, Ciara E.; O'Neill, Feidhlim T.; Sheridan, John T.; Gallego, Sergi; Neipp, Cristian

2006-04-01

The nonlocal polymerization driven diffusion model is used to describe holographic grating formation in acrylamidebased photopolymer. The free radical chain polymerization process results in polymer being generated nonlocal both in space and time to the point of chain initiation. A Gaussian spatial material response function and an exponential temporal material response function are used to account for these effects. In this paper we firstly examine the nature of the temporal evolution of grating formation for short recording periods. It is shown that in this case, temporal effects become most notable and the inclusion of the nonlocal temporal response function is shown to be necessary to accurately describe the process. In particular, brief post exposure selfamplification of the refractive index modulation is noted. This is attributed to continued chain growth for a brief period after exposure. Following this a slight decay in the grating amplitude also occurs. This we believe is due to the continued diffusion of monomer after exposure. Since the sinusoidal recording pattern generates a monomer concentration gradient during the recording process monomer diffusion occurs both during and after exposure. The evolution of the refractive index modulation is determined by the respective refractive index values of the recording material components. From independent measurements it is noted that the refractive index value of the monomer is slightly less than that of the background material. Therefore as monomer diffuses back into the dark regions, a reduction in overall refractive index modulation occurs. Volume changes occurring within the material also affect the nature of grating evolution. To model these effects we employ a free volume concept. Due to the fact that the covalent single carbon bond in the polymer is up to 50% shorter than the van der Waals bond in the liquid monomer state, free volume is created when monomer is converted to polymer. For each bond conversion we assume a hole is generated which then collapses at some characteristic rate constant. Incorporating each of these effects into our model, the model is then solved using a Finite-Difference Time- Domain method (FDTD). The Lorentz-Lorenz relation is used to determine the overall evolution refractive index modulation and the corresponding diffraction efficiency of the resulting grating is calculated using Rigorous Coupled Wave Analysis (RCWA). Fits are then carried out to experimental data for 1 second exposures. Good quality fits are achieved and material parameters extracted. Monomer diffusion rates are determined to be of the order of D ~ 10 -10 cm 2/s and the time constant of the nonlocal material temporal response function being of the order of τ n ~ 10 -2s. Material shrinkage occurring over these recording periods is also determined.

Validation of an LES Model for Soot Evolution against DNS Data in Turbulent Jet Flames

NASA Astrophysics Data System (ADS)

Mueller, Michael

2012-11-01

An integrated modeling approach for soot evolution in turbulent reacting flows is validated against three-dimensional Direct Numerical Simulation (DNS) data in a set of n-heptane nonpremixed temporal jet flames. As in the DNS study, the evolution of the soot population is described statistically with the Hybrid Method of Moments (HMOM). The oxidation of the fuel and formation of soot precursors are described with the Radiation Flamelet/Progress Variable (RFPV) model that includes an additional transport equation for Polycyclic Aromatic Hydrocarbons (PAH) to account for the slow chemistry governing these species. In addition, the small-scale interactions between soot, chemistry, and turbulence are described with a presumed subfilter PDF approach that accounts for the very large spatial intermittency characterizing soot in turbulent reacting flows. The DNS dataset includes flames at three different Damköhler numbers to study the influence of global mixing rates on the evolution of PAH and soot. In this work, the ability of the model to capture these trends quantitatively as Damköhler number varies is investigated. In order to reliably assess the LES approach, the LES is initialized from the filtered DNS data after an initial transitional period in an effort to minimize the hydrodynamic differences between the DNS and the LES.

Measurement of electron-ion relaxation in warm dense copper

DOE PAGES

Cho, B. I.; Ogitsu, T.; Engelhorn, K.; ...

2016-01-06

Experimental investigation of electron-ion coupling and electron heat capacity of copper in warm and dense states are presented. From time-resolved x-ray absorption spectroscopy, the temporal evolution of electron temperature is obtained for non-equilibrium warm dense copper heated by an intense femtosecond laser pulse. Electron heat capacity and electron-ion coupling are inferred from the initial electron temperature and its decrease over 10 ps. As a result, data are compared with various theoretical models.

Multisite tumor sampling enhances the detection of intratumor heterogeneity at all different temporal stages of tumor evolution.

PubMed

Erramuzpe, Asier; Cortés, Jesús M; López, José I

2018-02-01

Intratumor heterogeneity (ITH) is an inherent process of tumor development that has received much attention in previous years, as it has become a major obstacle for the success of targeted therapies. ITH is also temporally unpredictable across tumor evolution, which makes its precise characterization even more problematic since detection success depends on the precise temporal snapshot at which ITH is analyzed. New and more efficient strategies for tumor sampling are needed to overcome these difficulties which currently rely entirely on the pathologist's interpretation. Recently, we showed that a new strategy, the multisite tumor sampling, works better than the routine sampling protocol for the ITH detection when the tumor time evolution was not taken into consideration. Here, we extend this work and compare the ITH detections of multisite tumor sampling and routine sampling protocols across tumor time evolution, and in particular, we provide in silico analyses of both strategies at early and late temporal stages for four different models of tumor evolution (linear, branched, neutral, and punctuated). Our results indicate that multisite tumor sampling outperforms routine protocols in detecting ITH at all different temporal stages of tumor evolution. We conclude that multisite tumor sampling is more advantageous than routine protocols in detecting intratumor heterogeneity.

Three-Dimensional Structure and Evolution of Extreme-Ultraviolet Bright Points Observed by STEREO/SECCHI/EUVI

NASA Technical Reports Server (NTRS)

Kwon, Ryun Young; Chae, Jongchul; Davila, Joseph M.; Zhang, Jie; Moon, Yong-Jae; Poomvises, Watanachak; Jones, Shaela I.

2012-01-01

We unveil the three-dimensional structure of quiet-Sun EUV bright points and their temporal evolution by applying a triangulation method to time series of images taken by SECCHI/EUVI on board the STEREO twin spacecraft. For this study we examine the heights and lengths as the components of the three-dimensional structure of EUV bright points and their temporal evolutions. Among them we present three bright points which show three distinct changes in the height and length: decreasing, increasing, and steady. We show that the three distinct changes are consistent with the motions (converging, diverging, and shearing, respectively) of their photospheric magnetic flux concentrations. Both growth and shrinkage of the magnetic fluxes occur during their lifetimes and they are dominant in the initial and later phases, respectively. They are all multi-temperature loop systems which have hot loops (approx. 10(exp 6.2) K) overlying cooler ones (approx 10(exp 6.0) K) with cool legs (approx 10(exp 4.9) K) during their whole evolutionary histories. Our results imply that the multi-thermal loop system is a general character of EUV bright points. We conclude that EUV bright points are flaring loops formed by magnetic reconnection and their geometry may represent the reconnected magnetic field lines rather than the separator field lines.

Collective bubble oscillations as a component of surf infrasound.

PubMed

Park, Joseph; Garcés, Milton; Fee, David; Pawlak, Geno

2008-05-01

Plunging surf is a known generator of infrasound, though the mechanisms have not been clearly identified. A model based on collective bubble oscillations created by demise of the initially entrained air pocket is examined. Computed spectra are compared to infrasound data from the island of Kauai during periods of medium, large, and extreme surf. Model results suggest that bubble oscillations generated by plunging waves are plausible generators of infrasound, and that dynamic bubble plume evolution on a temporal scale comparable to the breaking wave period may contribute to the broad spectral lobe of dominant infrasonic energy observed in measured data. Application of an inverse model has potential to characterize breaking wave size distributions, energy, and temporal changes in seafloor morphology based on remotely sensed infrasound.

On the space and time evolution of regular or irregular human heart or brain signals

NASA Astrophysics Data System (ADS)

Tuncay, Ç.

2009-01-01

A coupled map is suggested to investigate various spatial or temporal designs in biology: several cells (or tissues) in an organ are considered as connected to each other in terms of some molecular diffusions or electrical potential differences and so on. The biological systems (groups of cells) start from various initial conditions for spatial designs (or initial signals for temporal designs) and they evolve in time in terms of the mentioned interactions (connections) besides some individual feedings. The basic aim of the present contribution is to mimic various empirical data for the heart (in normal, quasi-stable, unstable and post operative physiological conditions) or brain (regular or irregular; for epilepsy) signals. The mentioned empirical data are borrowed from various works in the literature which are cited. The suggested model (to be used besides or instead of the artificial network models) involves simple mathematics and the related software is easy. The results may be considered as in good agreement with the mentioned real signals.

Effect of node attributes on the temporal dynamics of network structure

NASA Astrophysics Data System (ADS)

Momeni, Naghmeh; Fotouhi, Babak

2017-03-01

Many natural and social networks evolve in time and their structures are dynamic. In most networks, nodes are heterogeneous, and their roles in the evolution of structure differ. This paper focuses on the role of individual attributes on the temporal dynamics of network structure. We focus on a basic model for growing networks that incorporates node attributes (which we call "quality"), and we focus on the problem of forecasting the structural properties of the network in arbitrary times for an arbitrary initial network. That is, we address the following question: If we are given a certain initial network with given arbitrary structure and known node attributes, then how does the structure change in time as new nodes with given distribution of attributes join the network? We solve the model analytically and obtain the quality-degree joint distribution and degree correlations. We characterize the role of individual attributes in the position of individual nodes in the hierarchy of connections. We confirm the theoretical findings with Monte Carlo simulations.

On the implementation of faults in finite-element glacial isostatic adjustment models

NASA Astrophysics Data System (ADS)

Steffen, Rebekka; Wu, Patrick; Steffen, Holger; Eaton, David W.

2014-01-01

Stresses induced in the crust and mantle by continental-scale ice sheets during glaciation have triggered earthquakes along pre-existing faults, commencing near the end of the deglaciation. In order to get a better understanding of the relationship between glacial loading/unloading and fault movement due to the spatio-temporal evolution of stresses, a commonly used model for glacial isostatic adjustment (GIA) is extended by including a fault structure. Solving this problem is enabled by development of a workflow involving three cascaded finite-element simulations. Each step has identical lithospheric and mantle structure and properties, but evolving stress conditions along the fault. The purpose of the first simulation is to compute the spatio-temporal evolution of rebound stress when the fault is tied together. An ice load with a parabolic profile and simple ice history is applied to represent glacial loading of the Laurentide Ice Sheet. The results of the first step describe the evolution of the stress and displacement induced by the rebound process. The second step in the procedure augments the results of the first, by computing the spatio-temporal evolution of total stress (i.e. rebound stress plus tectonic background stress and overburden pressure) and displacement with reaction forces that can hold the model in equilibrium. The background stress is estimated by assuming that the fault is in frictional equilibrium before glaciation. The third step simulates fault movement induced by the spatio-temporal evolution of total stress by evaluating fault stability in a subroutine. If the fault remains stable, no movement occurs; in case of fault instability, the fault displacement is computed. We show an example of fault motion along a 45°-dipping fault at the ice-sheet centre for a two-dimensional model. Stable conditions along the fault are found during glaciation and the initial part of deglaciation. Before deglaciation ends, the fault starts to move, and fault offsets of up to 22 m are obtained. A fault scarp at the surface of 19.74 m is determined. The fault is stable in the following time steps with a high stress accumulation at the fault tip. Along the upper part of the fault, GIA stresses are released in one earthquake.

Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance.

PubMed

Fitzgerald, Devon M; Hastings, P J; Rosenberg, Susan M

2017-03-01

Genomic instability underlies many cancers and generates genetic variation that drives cancer initiation, progression, and therapy resistance. In contrast with classical assumptions that mutations occur purely stochastically at constant, gradual rates, microbes, plants, flies, and human cancer cells possess mechanisms of mutagenesis that are upregulated by stress responses. These generate transient, genetic-diversity bursts that can propel evolution, specifically when cells are poorly adapted to their environments-that is, when stressed. We review molecular mechanisms of stress-response-dependent (stress-induced) mutagenesis that occur from bacteria to cancer, and are activated by starvation, drugs, hypoxia, and other stressors. We discuss mutagenic DNA break repair in Escherichia coli as a model for mechanisms in cancers. The temporal regulation of mutagenesis by stress responses and spatial restriction in genomes are common themes across the tree of life. Both can accelerate evolution, including the evolution of cancers. We discuss possible anti-evolvability drugs, aimed at targeting mutagenesis and other variation generators, that could be used to delay the evolution of cancer progression and therapy resistance.

Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance

PubMed Central

Fitzgerald, Devon M.; Hastings, P.J.; Rosenberg, Susan M.

2017-01-01

Genomic instability underlies many cancers and generates genetic variation that drives cancer initiation, progression, and therapy resistance. In contrast with classical assumptions that mutations occur purely stochastically at constant, gradual rates, microbes, plants, flies, and human cancer cells possess mechanisms of mutagenesis that are upregulated by stress responses. These generate transient, genetic-diversity bursts that can propel evolution, specifically when cells are poorly adapted to their environments—that is, when stressed. We review molecular mechanisms of stress-response-dependent (stress-induced) mutagenesis that occur from bacteria to cancer, and are activated by starvation, drugs, hypoxia, and other stressors. We discuss mutagenic DNA break repair in Escherichia coli as a model for mechanisms in cancers. The temporal regulation of mutagenesis by stress responses and spatial restriction in genomes are common themes across the tree of life. Both can accelerate evolution, including the evolution of cancers. We discuss possible anti-evolvability drugs, aimed at targeting mutagenesis and other variation generators, that could be used to delay the evolution of cancer progression and therapy resistance. PMID:29399660

Numerical simulation of stability and stability control of high speed compressible rotating couette flow

NASA Technical Reports Server (NTRS)

Biringen, Sedat; Hatay, Ferhat F.

1993-01-01

The nonlinear temporal evolution of disturbances in compressible flow between infinitely long, concentric cylinders is investigated through direct numerical simulations of the full, three-dimensional Navier-Stokes and energy equations. Counter-rotating cylinders separated by wide gaps are considered with supersonic velocities of the inner cylinder. Initially, the primary disturbance grows exponentially in accordance with linear stability theory. As the disturbances evolve, higher harmonics and subharmonics are generated in a cascading order eventually reaching a saturation state. Subsequent highly nonlinear stages of the evolution are governed by the interaction of the disturbance modes, particularly the axial subharmonics. Nonlinear evolution of the disturbance field is characterized by the formation of high-shear layers extending from the inner cylinder towards the center of the gap in the form of jets similar to the ejection events in transitional and turbulent wall-bounded shear flows.

Isothermal crystallization of poly(3-hydroxybutyrate) studied by terahertz two-dimensional correlation spectroscopy

NASA Astrophysics Data System (ADS)

Hoshina, Hiromichi; Ishii, Shinya; Morisawa, Yusuke; Sato, Harumi; Noda, Isao; Ozaki, Yukihiro; Otani, Chiko

2012-01-01

The isothermal crystallization of poly(3-hydroxybutylate) (PHB) was studied by monitoring the temporal evolution of terahertz absorption spectra in conjunction with spectral analysis using two-dimensional correlation spectroscopy. Correlation between the absorption peaks and the sequential order of the changes in spectral intensity extracted from synchronous and asynchronous plots indicated that crystallization of PHB at 90 °C is a two step process, in which C-H...O=C hydrogen bonds are initially formed before well-defined crystal structures are established.

Dopamine reward prediction-error signalling: a two-component response

PubMed Central

Schultz, Wolfram

2017-01-01

Environmental stimuli and objects, including rewards, are often processed sequentially in the brain. Recent work suggests that the phasic dopamine reward prediction-error response follows a similar sequential pattern. An initial brief, unselective and highly sensitive increase in activity unspecifically detects a wide range of environmental stimuli, then quickly evolves into the main response component, which reflects subjective reward value and utility. This temporal evolution allows the dopamine reward prediction-error signal to optimally combine speed and accuracy. PMID:26865020

Anomalous behavior in temporal evolution of ripple wavelength under medium energy Ar{sup +}-ion bombardment on Si: A case of initial wavelength selection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garg, Sandeep Kumar; Inter-University Accelerator Centre, Aruna Asaf Ali Marg, New Delhi 110 067; Cuerno, Rodolfo

We have studied the early stage dynamics of ripple patterns on Si surfaces, in the fluence range of 1–3 × 10{sup 18} ions cm{sup −2}, as induced by medium energy Ar{sup +}-ion irradiation at room temperature. Under our experimental conditions, the ripple evolution is found to be in the linear regime, while a clear decreasing trend in the ripple wavelength is observed up to a certain time (fluence). Numerical simulations of a continuum model of ion-sputtered surfaces suggest that this anomalous behavior is due to the relaxation of the surface features of the experimental pristine surface during the initial stage of patternmore » formation. The observation of this hitherto unobserved behavior of the ripple wavelength seems to have been enabled by the use of medium energy ions, where the ripple wavelengths are found to be order(s) of magnitude larger than those at lower ion energies.« less

Initiation of arcing on tungsten surface exposed to steady state He plasmas

NASA Astrophysics Data System (ADS)

Kajita, Shin; Noiri, Yasuyuki; Ohno, Noriyasu

2015-09-01

Arcing was initiated in steady state helium plasmas by negatively biasing a tungsten electrode to around -500 V. On the tungsten electrode, nanostructures were grown by the plasma irradiation. In this study, we characterized the property of the initiated arcing by measuring the temporal evolutions of the electrode potential and the arc current. The ignition frequency and duration of arcing were presented from the potential measurements; the arc duration was in the range of <10 ms and the distribution altered when changing the biasing voltage. The behavior of arc spots was observed with a fast framing camera. It was shown that the spots split frequently, and sometimes, they run on the surface independently. From the fluctuation of the arc current, the fractal feature of arcing was revealed.

Lithosphere erosion and continental breakup: Interaction of extension, plume upwelling and melting

NASA Astrophysics Data System (ADS)

Lavecchia, Alessio; Thieulot, Cedric; Beekman, Fred; Cloetingh, Sierd; Clark, Stuart

2017-06-01

We present the results of thermo-mechanical modelling of extension and breakup of a heterogeneous continental lithosphere, subjected to plume impingement in presence of intraplate stress field. We incorporate partial melting of the extending lithosphere, underlying upper mantle and plume, caused by pressure-temperature variations during the thermo-mechanical evolution of the conjugate passive margin system. Effects of melting included in the model account for thermal effects, causing viscosity reduction due to host rock heating, and mechanical effects, due to cohesion loss. Our study provides better understanding on how presence of melts can influence the evolution of rifting. Here we focus particularly on the role of melting for the temporal and spatial evolution of passive margin geometry and rift migration. Depending on the lithospheric structure, melt presence may have a significant impact on the characteristics of areas affected by lithospheric extension. Pre-existing lithosphere heterogeneities determine the location of initial breakup, but in presence of plumes the subsequent evolution is more difficult to predict. For small distances between plume and area of initial rifting, the development of symmetric passive margins is favored, whereas increasing the distance promotes asymmetry. For a plume-rifting distance large enough to prevent interaction, the effect of plumes on the overlying lithosphere is negligible and the rift persists at the location of the initial lithospheric weakness. When the melt effect is included, the development of asymmetric passive continental margins is fostered. In this case, melt-induced lithospheric weakening may be strong enough to cause rift jumps toward the plume location.

Unpredictable convection in a small box: Molecular-dynamics experiments

NASA Astrophysics Data System (ADS)

Rapaport, D. C.

1992-08-01

The Rayleigh-Bénard problem has been studied using discrete-particle simulation of a two-dimensional fluid in a square box. The presence of temporal periodicity in the convective roll structure was observed, but, more significantly, different simulation runs under identical conditions but with initial states that differed in ways that are seemingly irrelevant at the macroscopic level exhibited very different forms of pattern evolution. The final state always consisted of a horizontally adjacent pair of rolls, but not all initial states evolved to produce well-established periodic behavior, despite the fact that very long runs were undertaken. Results for both hard- and soft-disk fluids are described; the simulations included systems with over 105 particles.

Numerical simulation of geomorphic, climatic and anthropogenic drivers of soil distribution on semi-arid hillslopes

NASA Astrophysics Data System (ADS)

Willgoose, G. R.; Cohen, S.; Svoray, T.; Sela, S.; Hancock, G. R.

2010-12-01

Numerical models are an important tool for studying landscape processes as they allow us to isolate specific processes and drivers and test various physics and spatio-temporal scenarios. Here we use a distributed physically-based soil evolution model (mARM4D) to describe the drivers and processes controlling soil-landscape evolution on a field-site at the fringe between the Mediterranean and desert regions of Israel. This study is an initial effort in a larger project aimed at improving our understanding of the mechanisms and drivers that led to the extensive removal of soils from the loess covered hillslopes of this region. This specific region is interesting as it is located between the Mediterranean climate region in which widespread erosion from hillslopes was attributed to human activity during the Holocene and the arid region in which extensive removal of loess from hillslopes was shown to have been driven by climatic changes during the late-Pleistocene. First we study the sediment transport mechanism of the soil-landscape evolution processes in our study-site. We simulate soil-landscape evolution with only one sediment transport process (fluvial or diffusive) at a time. We find that diffusive sediment transport is likely the dominant process in this site as it resulted in soil distributions that better corresponds to current observations. We then simulate several realistic climatic/anthropogenic scenarios (based on the literature) in order to quantify the sensitivity of the soil-landscape evolution process to temporal fluctuations. We find that this site is relatively insensitive to short term (several thousands of years) sharp, changes. This suggests that climate, rather then human activity, was the main driver for the extensive removal of loess from the hillslopes.

Temporal Experiment for Storms and Tropical Systems Technology Demonstration (TEMPEST-D): Risk Reduction for 6U-Class Nanosatellite Constellations

NASA Astrophysics Data System (ADS)

Reising, S. C.; Todd, G.; Kummerow, C. D.; Chandrasekar, V.; Padmanabhan, S.; Lim, B.; Brown, S. T.; van den Heever, S. C.; L'Ecuyer, T.; Ruf, C. S.; Luo, Z. J.; Munchak, S. J.; Haddad, Z. S.; Boukabara, S. A.

2015-12-01

The Temporal Experiment for Storms and Tropical Systems Technology Demonstration (TEMPEST-D) is designed to demonstrate required technology to enable a constellation of 6U-Class nanosatellites to directly observe the time evolution of clouds and study the conditions that control the transition of clouds to precipitation using high-temporal resolution observations. TEMPEST millimeter-wave radiometers in the 90-GHz to 183-GHz frequency range penetrate into the cloud to observe key changes as the cloud begins to precipitate or ice accumulates inside the storm. The evolution of ice formation in clouds is important for climate prediction since it largely drives Earth's radiation budget. TEMPEST improves understanding of cloud processes and helps to constrain one of the largest sources of uncertainty in climate models. TEMPEST-D provides observations at five millimeter-wave frequencies from 90 to 183 GHz using a single compact instrument that is well suited for the 6U-Class architecture and fits well within the capabilities of NASA's CubeSat Launch Initiative (CSLI), for which TEMPEST-D was approved in 2015. For a potential future mission of one year of operations, five identical 6U-Class satellites deployed in the same orbital plane with 5-10 minute spacing at ~400 km altitude and 50°-65° inclination are expected to capture 3 million observations of precipitation, including 100,000 deep convective events. TEMPEST is designed to provide critical information on the time evolution of cloud and precipitation microphysics, yielding a first-order understanding of the behavior of assumptions in current cloud-model parameterizations in diverse climate regimes.

Effect of chemical heat release in a temporally evolving mixing layer

NASA Technical Reports Server (NTRS)

Higuera, F. J.; Moser, R. D.

1994-01-01

Two-dimensional numerical simulations of a temporally evolving mixing layer with an exothermic infinitely fast diffusion flame between two unmixed reactants have been carried out in the limit of zero Mach number to study the effect of the heat release on the early stages of the evolution of the flow. Attention has been directed to relatively large values of the oxidizer-to-fuel mass stoichiometric ratio typical of hydrocarbon flames, and initial vorticity distributions thicker than the temperature and species distributions have been chosen to mimic the situation at the outlet of a jet. The results show that, during the stages of the evolution covered by the present simulations, enhancement of combustion occurs by local stretching of the flame without much augmentation of its area. The rate of product generation depends strongly on the initial conditions, which suggests the possibility of controlling the combustion by acting on the flow. Rollup and vortex amalgamation still occur in these reacting flows but are very much affected by the production of new vorticity by baroclinic torques. These torques lead to counter rotating vortex pairs around the flame and, more importantly, in thin layers of light fluid that leave the vicinity of the flame when the Kelvin-Helmholtz instability begins to develop. Propelled by the vortex pairs, these layers wind around, split on reaching high pressure regions, and originate new vortex pairs in a process that ends up building large-scale vortices with a vorticity distribution more complex than for a constant density fluid.

Detonator Performance Characterization Using Multi-Frame Laser Schlieren Imaging

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Landon, C. D.; Murphy, M. J.; Martinez, M. E.; Mason, T. A.; Thomas, K. A.

2009-12-01

Several experiments that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation will be presented. High speed laser schlieren movies have been used to study several explosive initiation events, such as exploding bridgewires (EBW), exploding foil initiators (EFI) (or slappers), direct optical initiation (DOI), and electrostatic discharge (ESD). Additionally, a series of tests have been performed on "cut-back" detonators with varying initial pressing (IP) heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. The EPIC hydrodynamic code has been used to analyze the shock fronts from the schlieren images to reverse calculate likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. LA-UR-05099

Using Schlieren Visualization to Track Detonator Performance

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Bolme, C. A.; Murphy, M. J.; Landon, C. D.; Mason, T. A.; Adrian, R. J.; Akinci, A. A.; Martinez, M. E.; Thomas, K. A.

2007-12-01

Several experiments will be presented that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation, to full detonation, to transition, to booster and booster detonation. High-speed multiframe schlieren imagery has been used to study several explosive initiation events, such as exploding bridgewires (EBWs), exploding foil initiators (EFIs or "slappers"), direct optical initiation (DOI), and electrostatic discharge. Additionally, a series of tests has been performed on "cut-back" detonators with varying initial pressing heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events, such as boosters and insensitive high explosives booster evaluation, will be discussed. The EPIC finite element code has been used to analyze the shock fronts from the schlieren images to solve iteratively for consistent boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator.

Using Schlieren Visualization to Track Detonator Performance

NASA Astrophysics Data System (ADS)

Clarke, Steven; Thomas, Keith; Martinez, Michael; Akinci, Adrian; Murphy, Michael; Adrian, Ronald

2007-06-01

Several experiments that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation will be presented. High Speed Laser Schlieren Movies have been used to study several explosive initiation events, such as exploding bridgewires (EBW), Exploding Foil Initiators (EFI) (or slappers), Direct Optical Initiation (DOI), and ElectroStatic Discharge (ESD). Additionally, a series of tests have been performed on ``cut-back'' detonators with varying initial pressing (IP) heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. EPIC Hydrodynamic code has been used to analyze the shock fronts from the Schlieren images to reverse calculate likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. LA-UR-07-1229

Temporal variations in early developmental decisions: an engine of forebrain evolution.

PubMed

Bielen, H; Pal, S; Tole, S; Houart, C

2017-02-01

Tight control of developmental timing is pivotal to many major processes in developmental biology, such as patterning, fate specification, cell cycle dynamics, cell migration and connectivity. Temporal change in these ontogenetic sequences is known as heterochrony, a major force in the evolution of body plans and organogenesis. In the last 5 years, studies in fish and rodents indicate that heterochrony in signaling during early development generates diversity in forebrain size and complexity. Here, we summarize these findings and propose that, additionally to spatio-temporal tuning of neurogenesis, temporal and quantitative modulation of signaling events drive pivotal changes in shape, size and complexity of the forebrain across evolution, participating to the generation of diversity in animal behavior and emergence of cognition. Copyright © 2017 Elsevier Ltd. All rights reserved.

The evolution of meaning: spatio-temporal dynamics of visual object recognition.

PubMed

Clarke, Alex; Taylor, Kirsten I; Tyler, Lorraine K

2011-08-01

Research on the spatio-temporal dynamics of visual object recognition suggests a recurrent, interactive model whereby an initial feedforward sweep through the ventral stream to prefrontal cortex is followed by recurrent interactions. However, critical questions remain regarding the factors that mediate the degree of recurrent interactions necessary for meaningful object recognition. The novel prediction we test here is that recurrent interactivity is driven by increasing semantic integration demands as defined by the complexity of semantic information required by the task and driven by the stimuli. To test this prediction, we recorded magnetoencephalography data while participants named living and nonliving objects during two naming tasks. We found that the spatio-temporal dynamics of neural activity were modulated by the level of semantic integration required. Specifically, source reconstructed time courses and phase synchronization measures showed increased recurrent interactions as a function of semantic integration demands. These findings demonstrate that the cortical dynamics of object processing are modulated by the complexity of semantic information required from the visual input.

Compositional Variations of Paleogene and Neogene Tephra From the Northern Izu-Bonin-Mariana Arc

NASA Astrophysics Data System (ADS)

Tepley, F. J., III; Barth, A. P.; Brandl, P. A.; Hickey-Vargas, R.; Jiang, F.; Kanayama, K.; Kusano, Y.; Li, H.; Marsaglia, K. M.; McCarthy, A.; Meffre, S.; Savov, I. P.; Yogodzinski, G. M.

2014-12-01

A primary objective of IODP Expedition 351 was to evaluate arc initiation processes of the Izu-Bonin-Mariana (IBM) volcanic arc and its compositional evolution through time. To this end, a single thick section of sediment overlying oceanic crust was cored in the Amami Sankaku Basin where a complete sediment record of arc inception and evolution is preserved. This sediment record includes ash and pyroclasts, deposited in fore-arc, arc, and back-arc settings, likely associated with both the ~49-25 Ma emergent IBM volcanic arc and the evolving Ryukyu-Kyushu volcanic arc. Our goal was to assess the major element evolution of the nascent and evolving IBM system using the temporally constrained record of the early and developing system. In all, more than 100 ash and tuff layers, and pyroclastic fragments were selected from temporally resolved portions of the core, and from representative fractions of the overall core ("core catcher"). The samples were prepared to determine major and minor element compositions via electron microprobe analyses. This ash and pyroclast record will allow us to 1) resolve the Paleogene evolutionary history of the northern IBM arc in greater detail; 2) determine compositional variations of this portion of the IBM arc through time; 3) compare the acquired data to an extensive whole rock and tephra dataset from other segments of the IBM arc; 4) test hypotheses of northern IBM arc evolution and the involvement of different source reservoirs; and 5) mark important stratigraphic markers associated with the Neogene volcanic history of the adjacent evolving Ryukyu-Kyushu arc.

Universal and integrable nonlinear evolution systems of equations in 2+1 dimensions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maccari, A.

1997-08-01

Integrable systems of nonlinear partial differential equations (PDEs) are obtained from integrable equations in 2+1 dimensions, by means of a reduction method of broad applicability based on Fourier expansion and spatio{endash}temporal rescalings, which is asymptotically exact in the limit of weak nonlinearity. The integrability by the spectral transform is explicitly demonstrated, because the corresponding Lax pairs have been derived, applying the same reduction method to the Lax pair of the initial equation. These systems of nonlinear PDEs are likely to be of applicative relevance and have a {open_quotes}universal{close_quotes} character, inasmuch as they may be derived from a very large classmore » of nonlinear evolution equations with a linear dispersive part. {copyright} {ital 1997 American Institute of Physics.}« less

Electron and ion heating by whistler turbulence: Three-dimensional particle-in-cell simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hughes, R. Scott; Gary, S. Peter; Wang, Joseph

2014-12-17

Three-dimensional particle-in-cell simulations of decaying whistler turbulence are carried out on a collisionless, homogeneous, magnetized, electron-ion plasma model. In addition, the simulations use an initial ensemble of relatively long wavelength whistler modes with a broad range of initial propagation directions with an initial electron beta β e = 0.05. The computations follow the temporal evolution of the fluctuations as they cascade into broadband turbulent spectra at shorter wavelengths. Three simulations correspond to successively larger simulation boxes and successively longer wavelengths of the initial fluctuations. The computations confirm previous results showing electron heating is preferentially parallel to the background magnetic fieldmore » B o, and ion heating is preferentially perpendicular to B o. The new results here are that larger simulation boxes and longer initial whistler wavelengths yield weaker overall dissipation, consistent with linear dispersion theory predictions of decreased damping, stronger ion heating, consistent with a stronger ion Landau resonance, and weaker electron heating.« less

Temporal Evolution of the Plasma Sheath Surrounding Solar Cells in Low Earth Orbit

NASA Technical Reports Server (NTRS)

Willis, Emily M.; Pour, Maria Z. A.

2017-01-01

Initial results from the PIC simulation and the LEM simulation have been presented. The PIC simulation results show that more detailed study is required to refine the ISS solar array current collection model and to understand the development of the current collection in time. The initial results from the LEM demonstrate that is it possible the transients are caused by solar array interaction with the environment, but there are presently too many assumptions in the model to be certain. Continued work on the PIC simulation will provide valuable information on the development of the barrier potential, which will allow refinement the LEM simulation and a better understanding of the causes and effects of the transients.

Evolution of hydromagnetic turbulence from the electroweak phase transition

NASA Astrophysics Data System (ADS)

Brandenburg, Axel; Kahniashvili, Tina; Mandal, Sayan; Pol, Alberto Roper; Tevzadze, Alexander G.; Vachaspati, Tanmay

2017-12-01

We present new simulations of decaying hydromagnetic turbulence for a relativistic equation of state relevant to the early Universe. We compare helical and nonhelical cases either with kinetically or magnetically dominated initial fields. Both kinetic and magnetic initial helicities lead to maximally helical magnetic fields after some time, but with different temporal decay laws. Both are relevant to the early Universe, although no mechanisms have yet been identified that produce magnetic helicity with strengths comparable to the big bang nucleosynthesis limit at scales comparable to the Hubble horizon at the electroweak phase transition. Nonhelical magnetically dominated fields could still produce picoGauss magnetic fields under most optimistic conditions. Only helical magnetic fields can potentially have nanoGauss strengths at scales up to 30 kpc today.

Origin and evolution of circular waves and spirals in Dictyostelium discoideum territories.

PubMed

Pálsson, E; Cox, E C

1996-02-06

Randomly distributed Dictyostelium discoideum cells form cooperative territories by signaling to each other with cAMP. Cells initiate the process by sending out pulsatile signals, which propagate as waves. With time, circular and spiral patterns form. We show that by adding spatial and temporal noise to the levels of an important regulator of external cAMP levels, the cAMP phosphodiesterase inhibitor, we can explain the natural progression of the system from randomly firing cells to circular waves whose symmetries break to form double- and single- or multi-armed spirals. When phosphodiesterase inhibitor is increased with time, mimicking experimental data, the wavelength of the spirals shortens, and a proportion of them evolve into pairs of connected spirals. We compare these results to recent experiments, finding that the temporal and spatial correspondence between experiment and model is very close.

Temporal evolution of bacterial communities associated with the in situ wetland-based remediation of a marine shore porphyry copper tailings deposit.

PubMed

Diaby, N; Dold, B; Rohrbach, E; Holliger, C; Rossi, P

2015-11-15

Mine tailings are a serious threat to the environment and public health. Remediation of these residues can be carried out effectively by the activation of specific microbial processes. This article presents detailed information about temporal changes in bacterial community composition during the remediation of a section of porphyry copper tailings deposited on the Bahía de Ite shoreline (Peru). An experimental remediation cell was flooded and transformed into a wetland in order to prevent oxidation processes, immobilizing metals. Initially, the top oxidation zone of the tailings deposit displayed a low pH (3.1) and high concentrations of metals, sulfate, and chloride, in a sandy grain size geological matrix. This habitat was dominated by sulfur- and iron-oxidizing bacteria, such as Leptospirillum spp., Acidithiobacillus spp., and Sulfobacillus spp., in a microbial community which structure resembled acid mine drainage environments. After wetland implementation, the cell was water-saturated, the acidity was consumed and metals dropped to a fraction of their initial respective concentrations. Bacterial communities analyzed by massive sequencing showed time-dependent changes both in composition and cell numbers. The final remediation stage was characterized by the highest bacterial diversity and evenness. Aside from classical sulfate reducers from the phyla δ-Proteobacteria and Firmicutes, community structure comprised taxa derived from very diverse habitats. The community was also characterized by an elevated proportion of rare phyla and unaffiliated sequences. Numerical ecology analysis confirmed that the temporal population evolution was driven by pH, redox, and K. Results of this study demonstrated the usefulness of a detailed follow-up of the remediation process, not only for the elucidation of the communities gradually switching from autotrophic, oxidizing to heterotrophic and reducing living conditions, but also for the long term management of the remediation wetlands. Copyright © 2015 Elsevier B.V. All rights reserved.

Sensitivity of Land Surface Parameters on Thunderstorm Simulation through HRLDAS-WRF Coupling Mode

NASA Astrophysics Data System (ADS)

Kumar, Dinesh; Kumar, Krishan; Mohanty, U. C.; Kisore Osuri, Krishna

2016-07-01

Land surface characteristics play an important role in large scale, regional and mesoscale atmospheric process. Representation of land surface characteristics can be improved through coupling of mesoscale atmospheric models with land surface models. Mesoscale atmospheric models depend on Land Surface Models (LSM) to provide land surface variables such as fluxes of heat, moisture, and momentum for lower boundary layer evolution. Studies have shown that land surface properties such as soil moisture, soil temperature, soil roughness, vegetation cover, have considerable effect on lower boundary layer. Although, the necessity to initialize soil moisture accurately in NWP models is widely acknowledged, monitoring soil moisture at regional and global scale is a very tough task due to high spatial and temporal variability. As a result, the available observation network is unable to provide the required spatial and temporal data for the most part of the globe. Therefore, model for land surface initializations rely on updated land surface properties from LSM. The solution for NWP land-state initialization can be found by combining data assimilation techniques, satellite-derived soil data, and land surface models. Further, it requires an intermediate step to use observed rainfall, satellite derived surface insolation, and meteorological analyses to run an uncoupled (offline) integration of LSM, so that the evolution of modeled soil moisture can be forced by observed forcing conditions. Therefore, for accurate land-state initialization, high resolution land data assimilation system (HRLDAS) is used to provide the essential land surface parameters. Offline-coupling of HRLDAS-WRF has shown much improved results over Delhi, India for four thunder storm events. The evolution of land surface variables particularly soil moisture, soil temperature and surface fluxes have provided more realistic condition. Results have shown that most of domain part became wetter and warmer after assimilation of soil moisture and soil temperature at the initial condition which helped to improve the exchange fluxes at lower atmospheric level. Mixing ratio were increased along with elevated theta-e at lower level giving a signature of improvement in LDAS experiment leading to a suitable condition for convection. In the analysis, moisture convergence, mixing ratio and vertical velocities have improved significantly in terms of intensity and time lag. Surface variables like soil moisture, soil temperature, sensible heat flux and latent heat flux have progressed in a possible realistic pattern. Above discussion suggests that assimilation of soil moisture and soil temperature improves the overall simulations significantly.

Simultaneous density-field visualization and PIV of the Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Prestridge, Katherine; Rightley, Paul; Benjamin, Robert; Kurnit, Norman; Boxx, Isaac; Vorobieff, Peter

1999-11-01

We describe a highly-detailed experimental characterization of the Richtmyer-Meshkov instability. A vertical curtain of heavy gas (SF_6) flows into the test section of an air-filled, horizontal shock tube, and the instability evolves after the passage of a Mach 1.2 shock past the curtain. The evolution of the curtain is visualized by seeding the SF6 with small (d ≈ 0.5 μm) glycol/water droplets using a modified theatrical fog generator. Because the event lasts only 1 ms and the initial conditions vary from test to test, rapid and high-resolution (both spatial and temporal) data acquisition is required in order to characterize the initial and dynamic conditions for each experimental event. A customized, frequency-doubled, burst mode Nd:YAG laser and a commercial single-pulse laser are used for the implementation of simultaneous density-field imaging and PIV diagnostics. We have provided data about flow scaling and mixing through image analysis, and PIV data gives us further quantitative physical insight into the evolution of the Richtmyer-Meshkov instability.

Cenozoic forearc tectonics in northeastern Japan: Relationships between outer forearc subsidence and plate boundary kinematics

NASA Astrophysics Data System (ADS)

Regalla, Christine

Here we investigate the relationships between outer forearc subsidence, the timing and kinematics of upper plate deformation and plate convergence rate in Northeast Japan to evaluate the role of plate boundary dynamics in driving forearc subsidence. The Northeastern Japan margin is one of the first non-accretionary subduction zones where regional forearc subsidence was argued to reflect tectonic erosion of large volumes of upper crustal rocks. However, we propose that a significant component of forearc subsidence could be the result of dynamic changes in plate boundary geometry. We provide new constraints on the timing and kinematics of deformation along inner forearc faults, new analyses of the evolution of outer forearc tectonic subsidence, and updated calculations of plate convergence rate. These data collectively reveal a temporal correlation between the onset of regional forearc subsidence, the initiation of upper plate extension, and an acceleration in local plate convergence rate. A similar analysis of the kinematic evolution of the Tonga, Izu-Bonin, and Mariana subduction zones indicates that the temporal correlations observed in Japan are also characteristic of these three non-accretionary margins. Comparison of these data with published geodynamic models suggests that forearc subsidence is the result of temporal variability in slab geometry due to changes in slab buoyancy and plate convergence rate. These observations suggest that a significant component of forearc subsidence at these four margins is not the product of tectonic erosion, but instead reflects changes in plate boundary dynamics driven by variable plate kinematics.

Hierarchical Spatio-temporal Visual Analysis of Cluster Evolution in Electrocorticography Data

DOE PAGES

Murugesan, Sugeerth; Bouchard, Kristofer; Chang, Edward; ...

2016-10-02

Here, we present ECoG ClusterFlow, a novel interactive visual analysis tool for the exploration of high-resolution Electrocorticography (ECoG) data. Our system detects and visualizes dynamic high-level structures, such as communities, using the time-varying spatial connectivity network derived from the high-resolution ECoG data. ECoG ClusterFlow provides a multi-scale visualization of the spatio-temporal patterns underlying the time-varying communities using two views: 1) an overview summarizing the evolution of clusters over time and 2) a hierarchical glyph-based technique that uses data aggregation and small multiples techniques to visualize the propagation of clusters in their spatial domain. ECoG ClusterFlow makes it possible 1) tomore » compare the spatio-temporal evolution patterns across various time intervals, 2) to compare the temporal information at varying levels of granularity, and 3) to investigate the evolution of spatial patterns without occluding the spatial context information. Lastly, we present case studies done in collaboration with neuroscientists on our team for both simulated and real epileptic seizure data aimed at evaluating the effectiveness of our approach.« less

Transition Characteristic Analysis of Traffic Evolution Process for Urban Traffic Network

PubMed Central

Chen, Hong; Li, Yang

2014-01-01

The characterization of the dynamics of traffic states remains fundamental to seeking for the solutions of diverse traffic problems. To gain more insights into traffic dynamics in the temporal domain, this paper explored temporal characteristics and distinct regularity in the traffic evolution process of urban traffic network. We defined traffic state pattern through clustering multidimensional traffic time series using self-organizing maps and construct a pattern transition network model that is appropriate for representing and analyzing the evolution progress. The methodology is illustrated by an application to data flow rate of multiple road sections from Network of Shenzhen's Nanshan District, China. Analysis and numerical results demonstrated that the methodology permits extracting many useful traffic transition characteristics including stability, preference, activity, and attractiveness. In addition, more information about the relationships between these characteristics was extracted, which should be helpful in understanding the complex behavior of the temporal evolution features of traffic patterns. PMID:24982969

No Future in the Past? The role of initial topography on landform evolution model predictions

NASA Astrophysics Data System (ADS)

Hancock, G. R.; Coulthard, T. J.; Lowry, J.

2014-12-01

Our understanding of earth surface processes is based on long-term empirical understandings, short-term field measurements as well as numerical models. In particular, numerical landscape evolution models (LEMs) have been developed which have the capability to capture a range of both surface (erosion and deposition), tectonics, as well as near surface or critical zone processes (i.e. pedogenesis). These models have a range of applications for understanding both surface and whole of landscape dynamics through to more applied situations such as degraded site rehabilitation. LEMs are now at the stage of development where if calibrated, can provide some level of reliability. However, these models are largely calibrated based on parameters determined from present surface conditions which are the product of much longer-term geology-soil-climate-vegetation interactions. Here, we assess the effect of the initial landscape dimensions and associated error as well as parameterisation for a potential post-mining landform design. The results demonstrate that subtle surface changes in the initial DEM as well as parameterisation can have a large impact on landscape behaviour, erosion depth and sediment discharge. For example, the predicted sediment output from LEM's is shown to be highly variable even with very subtle changes in initial surface conditions. This has two important implications in that decadal time scale field data is needed to (a) better parameterise models and (b) evaluate their predictions. We question how a LEM using parameters derived from field plots can firstly be employed to examine long-term landscape evolution. Secondly, the potential range of outcomes is examined based on estimated temporal parameter change and thirdly, the need for more detailed and rigorous field data for calibration and validation of these models is discussed.

Geodynamic Modeling of Planetary Ice-Oceans: Evolution of Ice-Shell Thickness in Convecting Two-Phase Systems

NASA Astrophysics Data System (ADS)

Allu Peddinti, D.; McNamara, A. K.

2016-12-01

Along with the newly unveiled icy surface of Pluto, several icy planetary bodies show indications of an active surface perhaps underlain by liquid oceans of some size. This augments the interest to explore the evolution of an ice-ocean system and its surface implications. The geologically young surface of the Jovian moon Europa lends much speculation to variations in ice-shell thickness over time. Along with the observed surface features, it suggests the possibility of episodic convection and conduction within the ice-shell as it evolved. What factors would control the growth of the ice-shell as it forms? If and how would those factors determine the thickness of the ice-shell and consequently the heat transfer? Would parameters such as tidal heating or initial temperature affect how the ice-shell grows and to what significance? We perform numerical experiments using geodynamical models of the two-phase ice-water system to study the evolution of planetary ice-oceans such as that of Europa. The models evolve self-consistently from an initial liquid ocean as it cools with time. The effects of presence, absence and magnitude of tidal heating on ice-shell thickness are studied in different models. The vigor of convection changes as the ice-shell continues to thicken. Initial modeling results track changes in the growth rate of the ice-shell as the vigor of the convection changes. The magnitude and temporal location of the rate change varies with different properties of tidal heating and values of initial temperature. A comparative study of models is presented to demonstrate how as the ice-shell is forming, its growth rate and convection are affected by processes such as tidal heating.

Review of complex networks application in hydroclimatic extremes with an implementation to characterize spatio-temporal drought propagation in continental USA

NASA Astrophysics Data System (ADS)

Konapala, Goutam; Mishra, Ashok

2017-12-01

The quantification of spatio-temporal hydroclimatic extreme events is a key variable in water resources planning, disaster mitigation, and preparing climate resilient society. However, quantification of these extreme events has always been a great challenge, which is further compounded by climate variability and change. Recently complex network theory was applied in earth science community to investigate spatial connections among hydrologic fluxes (e.g., rainfall and streamflow) in water cycle. However, there are limited applications of complex network theory for investigating hydroclimatic extreme events. This article attempts to provide an overview of complex networks and extreme events, event synchronization method, construction of networks, their statistical significance and the associated network evaluation metrics. For illustration purpose, we apply the complex network approach to study the spatio-temporal evolution of droughts in Continental USA (CONUS). A different drought threshold leads to a new drought event as well as different socio-economic implications. Therefore, it would be interesting to explore the role of thresholds on spatio-temporal evolution of drought through network analysis. In this study, long term (1900-2016) Palmer drought severity index (PDSI) was selected for spatio-temporal drought analysis using three network-based metrics (i.e., strength, direction and distance). The results indicate that the drought events propagate differently at different thresholds associated with initiation of drought events. The direction metrics indicated that onset of mild drought events usually propagate in a more spatially clustered and uniform approach compared to onsets of moderate droughts. The distance metric shows that the drought events propagate for longer distance in western part compared to eastern part of CONUS. We believe that the network-aided metrics utilized in this study can be an important tool in advancing our knowledge on drought propagation as well as other hydroclimatic extreme events. Although the propagation of droughts is investigated using the network approach, however process (physics) based approaches is essential to further understand the dynamics of hydroclimatic extreme events.

Neogene Uplift and Magmatism of Anatolia: New Insights from Drainage Analysis and Basalt Geochemistry

NASA Astrophysics Data System (ADS)

McNab, F.; Ball, P.; Hoggard, M.; White, N.

2017-12-01

The origin of Anatolia's high elevation and low relief plateaux has been the subject of much recent debate. Marine sedimentary rocks distributed across Central and Eastern Anatolia require significant regional uplift in Neogene times. This uplift cannot be explained by the present-day pattern of crustal deformation which, particularly across Central and Western Anatolia, is dominanted by strike-slip and extensional faulting. Positive long wavelength free-air gravity anomalies combined with slow upper mantle seismic wave speeds suggest that the sub-lithospheric mantle provides substantial topographic support. A range of geodynamic processes have been invoked, including complex slab fragmentation and lithospheric delamination. The temporal and spatial evolution of the Anatolian landscape should be recorded by drainage networks. Indeed, major catchments contain prominent knickzones with heights of hundreds of meters and length scales of several hundred kilometers. The stream power formulation for fluvial erosion permits these knickzones to be interpreted in terms of uplift history along a river's length. Here, we jointly invert an inventory of 1,844 river profiles to determine a spatial and temporal uplift rate history. When calibrated against independent observations of uplift rate, the resultant history provides significant new constraints for the evolution of Anatolian topography. In our model, the bulk of this topography appears to grow in Neogene times. Uplift initiates in Eastern Anatolia and propagates westward at uplift rates of up to 0.5 mm/yr. Coeval with this phase of uplift, abundant basaltic magmatism has occurred throughout Anatolia. We have compiled an extensive database of published geochemical analyses. Using this database, we analyse spatial and temporal patterns of basaltic compositions to discriminate between different modes of melt generation. Two independent techniques for estimating asthenospheric potential temperatures from the compositions of high-Mg basalts have been used. Elevated temperatures of c. 1380 ºC occur beneath Eastern Anatolia with a notable decrease towards the west. Overall, our results imply that the spatial and temporal evolution Anatolian topography is controlled by temperature variations within the asthenospheric mantle.

Effects of developmental variability on the dynamics and self-organization of cell populations

NASA Astrophysics Data System (ADS)

Prabhakara, Kaumudi H.; Gholami, Azam; Zykov, Vladimir S.; Bodenschatz, Eberhard

2017-11-01

We report experimental and theoretical results for spatiotemporal pattern formation in cell populations, where the parameters vary in space and time due to mechanisms intrinsic to the system, namely Dictyostelium discoideum (D.d.) in the starvation phase. We find that different patterns are formed when the populations are initialized at different developmental stages, or when populations at different initial developmental stages are mixed. The experimentally observed patterns can be understood with a modified Kessler-Levine model that takes into account the initial spatial heterogeneity of the cell populations and a developmental path introduced by us, i.e. the time dependence of the various biochemical parameters. The dynamics of the parameters agree with known biochemical studies. Most importantly, the modified model reproduces not only our results, but also the observations of an independent experiment published earlier. This shows that pattern formation can be used to understand and quantify the temporal evolution of the system parameters.

Effects of Initial Conditions on Shock Driven Flows

NASA Astrophysics Data System (ADS)

Martinez, Adam A.; Mula, Swathi M.; Charonko, John; Prestridge, Kathy

2017-11-01

The spatial and temporal evolution of shock-driven, variable density flows, such as the Richtmyer Meshkov (RM) instability, are strongly influenced by the initial conditions (IC's) of the flow at the time of interaction with shockwave. We study the effects of the IC's on the Vertical Shock Tube (VST) and on flows from Mach =1.2 to Mach =9. Experiments at the VST are of an Air-SF6 (At =0.6) multimode interface. Perturbations are generated using a shear layer with a flapper plate. Planar Laser Induced Fluorescence (PLIF) is used to characterize the IC's. New experiments are occurring using the Powder Gun driver at LANL Proton Radiography (pRad) facility. Mach number up to M =9 accelerate a Xenon-Helium (At =0.94) interface that is perturbed using a membrane supported by different sized grids. This presentation focuses on how to design and characterize different types of initial conditions for experiments.

[Mortality from Suicide in the Municipalities of Mainland Portugal: Spatio-Temporal Evolution between 1980 and 2015].

PubMed

Loureiro, Adriana; Almendra, Ricardo; Costa, Cláudia; Santana, Paula

2018-01-31

Suicide is considered a public health priority. It is a complex phenomenon resulting from the interaction of several factors, which do not depend solely on individual conditions. This study analyzes the spatio-temporal evolution of suicide mortality between 1980 and 2015, identifying areas of high risk, and their variation, in the 278 municipalities of Continental Portugal. Based on the number of self-inflicted injuries and deaths from suicide and the resident population, the spatio-temporal evolution of the suicide mortality rate was assessed via: i) a Poisson joinpoint regression model, and ii) spatio-temporal clustering methods. The suicide mortality rate evolution showed statistically significant increases over three periods (1980 - 1984; 1999 - 2002 and 2006 - 2015) and two statistically significant periods of decrease (1984 - 1995 and 1995 - 1999). The spatio-temporal analysis identified five clusters of high suicide risk (relative risk >1) and four clusters of low suicide risk (relative risk < 1). The periods when suicide mortality increases seem to overlap with times of economic and financial instability. The geographical pattern of suicide risk has changed: presently, the suicide rates from the municipalities in the Center and North are showing more similarity with those seen in the South, thus increasing the ruralization of the phenomenon of suicide. Between 1980 and 2015 the spacio-temporal pattern of mortality from suicide has been changing and is a phenomenon that is currently experiencing a growing trend (since 2006) and is of higher risk in rural areas.

On the Temporal Evolution of Red Sprites, Runaway Theory Versus Data

NASA Technical Reports Server (NTRS)

Yukhimuk, V.; Roussel-Dupre, R. A.; Symbalisty, E. M. D.

1999-01-01

The results of numerical simulations of red sprite discharges, namely the temporal evolutions of optical emissions, are presented and compared with observations. The simulations are done using the recently recalculated runaway avalanche rates. The temporal evolution of these simulations is in good agreement with ground-based photometer and CCD TV camera observations of red sprites. Our model naturally explains the "hairline" of red sprites as a boundary between the region where the intensity of optical emissions associated with runaway breakdown has a maximum and the region where the intensity of optical emissions caused by conventional breakdown and ambient electron heating has a maximum. We also present for the first time simulations of red sprites with a daytime conductivity profile.

Investigation of temporal-resolved emission spectra of highly charged Al ions from laser-produced plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Su, M. G., E-mail: sumg@nwnu.edu.cn; Sun, D. X.; Dong, C. Z.

2016-03-15

Temporal evolution of extreme ultraviolet emission from laser-produced aluminum (Al) plasma has been experimentally and theoretically investigated. Al plasmas have been measured by using the temporal-spatially resolved laser-produced plasma technique. The emission lines can be identified from 2p-3s, 3d, 4s, 4d, 5d transition lines from Al{sup 3+} to Al{sup 6+} ions. In order to quickly diagnose the plasma, the assumptions of a normalized Boltzmann distribution among the excited states and a steady-state collisional-radiative model are used to estimate the values of electron temperature and electron density in plasma. We succeeded in reproducing the simulated spectra related to the different timemore » delays, which are in good agreement with experiments. Temporal evolution behavior of highly charged Al ions in plasma has been analyzed, and the exponential decay about electron temperature and electron density has been obtained. The results indicate that the temporal-spatially resolved measurement is essential for accurate understanding of evolution behavior of highly charged ions in laser-produced plasmas.« less

1D-Var multilayer assimilation of X-band SAR data into a detailed snowpack model

NASA Astrophysics Data System (ADS)

Phan, X. V.; Ferro-Famil, L.; Gay, M.; Durand, Y.; Dumont, M.; Morin, S.; Allain, S.; D'Urso, G.; Girard, A.

2014-10-01

The structure and physical properties of a snowpack and their temporal evolution may be simulated using meteorological data and a snow metamorphism model. Such an approach may meet limitations related to potential divergences and accumulated errors, to a limited spatial resolution, to wind or topography-induced local modulations of the physical properties of a snow cover, etc. Exogenous data are then required in order to constrain the simulator and improve its performance over time. Synthetic-aperture radars (SARs) and, in particular, recent sensors provide reflectivity maps of snow-covered environments with high temporal and spatial resolutions. The radiometric properties of a snowpack measured at sufficiently high carrier frequencies are known to be tightly related to some of its main physical parameters, like its depth, snow grain size and density. SAR acquisitions may then be used, together with an electromagnetic backscattering model (EBM) able to simulate the reflectivity of a snowpack from a set of physical descriptors, in order to constrain a physical snowpack model. In this study, we introduce a variational data assimilation scheme coupling TerraSAR-X radiometric data into the snowpack evolution model Crocus. The physical properties of a snowpack, such as snow density and optical diameter of each layer, are simulated by Crocus, fed by the local reanalysis of meteorological data (SAFRAN) at a French Alpine location. These snowpack properties are used as inputs of an EBM based on dense media radiative transfer (DMRT) theory, which simulates the total backscattering coefficient of a dry snow medium at X and higher frequency bands. After evaluating the sensitivity of the EBM to snowpack parameters, a 1D-Var data assimilation scheme is implemented in order to minimize the discrepancies between EBM simulations and observations obtained from TerraSAR-X acquisitions by modifying the physical parameters of the Crocus-simulated snowpack. The algorithm then re-initializes Crocus with the modified snowpack physical parameters, allowing it to continue the simulation of snowpack evolution, with adjustments based on remote sensing information. This method is evaluated using multi-temporal TerraSAR-X images acquired over the specific site of the Argentière glacier (Mont-Blanc massif, French Alps) to constrain the evolution of Crocus. Results indicate that X-band SAR data can be taken into account to modify the evolution of snowpack simulated by Crocus.

Spatio-Temporal Mining of PolSAR Satellite Image Time Series

NASA Astrophysics Data System (ADS)

Julea, A.; Meger, N.; Trouve, E.; Bolon, Ph.; Rigotti, C.; Fallourd, R.; Nicolas, J.-M.; Vasile, G.; Gay, M.; Harant, O.; Ferro-Famil, L.

2010-12-01

This paper presents an original data mining approach for describing Satellite Image Time Series (SITS) spatially and temporally. It relies on pixel-based evolution and sub-evolution extraction. These evolutions, namely the frequent grouped sequential patterns, are required to cover a minimum surface and to affect pixels that are sufficiently connected. These spatial constraints are actively used to face large data volumes and to select evolutions making sense for end-users. In this paper, a specific application to fully polarimetric SAR image time series is presented. Preliminary experiments performed on a RADARSAT-2 SITS covering the Chamonix Mont-Blanc test-site are used to illustrate the proposed approach.

Comprehensive Representation of Hydrologic and Geomorphic Process Coupling in Numerical Models: Internal Dynamics and Basin Evolution

NASA Astrophysics Data System (ADS)

Istanbulluoglu, E.; Vivoni, E. R.; Ivanov, V. Y.; Bras, R. L.

2005-12-01

Landscape morphology has an important control on the spatial and temporal organization of basin hydrologic response to climate forcing, affecting soil moisture redistribution as well as vegetation function. On the other hand, erosion, driven by hydrology and modulated by vegetation, produces landforms over geologic time scales that reflect characteristic signatures of the dominant land forming process. Responding to extreme climate events or anthropogenic disturbances of the land surface, infrequent but rapid forms of erosion (e.g., arroyo development, landsliding) can modify topography such that basin hydrology is significantly influenced. Despite significant advances in both hydrologic and geomorphic modeling over the past two decades, the dynamic interactions between basin hydrology, geomorphology and terrestrial ecology are not adequately captured in current model frameworks. In order to investigate hydrologic-geomorphic-ecologic interactions at the basin scale we present initial efforts in integrating the CHILD landscape evolution model (Tucker et al. 2001) with the tRIBS hydrology model (Ivanov et al. 2004), both developed in a common software environment. In this talk, we present preliminary results of the numerical modeling of the coupled evolution of basin hydro-geomorphic response and resulting landscape morphology in two sets of examples. First, we discuss the long-term evolution of both the hydrologic response and the resulting basin morphology from an initially uplifted plateau. In the second set of modeling experiments, we implement changes in climate and land-use to an existing topography and compare basin hydrologic response to the model results when landscape form is fixed (e.g. no coupling between hydrology and geomorphology). Model results stress the importance of internal basin dynamics, including runoff generation mechanisms and hydrologic states, in shaping hydrologic response as well as the importance of employing comprehensive conceptualizations of hydrology in modeling landscape evolution.

Diffusive smoothing of surfzone bathymetry by gravity-driven sediment transport

NASA Astrophysics Data System (ADS)

Moulton, M. R.; Elgar, S.; Raubenheimer, B.

2012-12-01

Gravity-driven sediment transport often is assumed to have a small effect on the evolution of nearshore morphology. Here, it is shown that down-slope gravity-driven sediment transport is an important process acting to smooth steep bathymetric features in the surfzone. Gravity-driven transport can be modeled as a diffusive term in the sediment continuity equation governing temporal (t) changes in bed level (h): ∂h/∂t ≈ κ ▽2h, where κ is a sediment diffusion coefficient that is a function of the bed shear stress (τb) and sediment properties, such as the grain size and the angle of repose. Field observations of waves, currents, and the evolution of large excavated holes (initially 10-m wide and 2-m deep, with sides as steep as 35°) in an energetic surfzone are consistent with diffusive smoothing by gravity. Specifically, comparisons of κ estimated from the measured bed evolution with those estimated with numerical model results for several transport theories suggest that gravity-driven sediment transport dominates the bed evolution, with κ proportional to a power of τb. The models are initiated with observed bathymetry and forced with observed waves and currents. The diffusion coefficients from the measurements and from the model simulations were on average of order 10-5 m2/s, implying evolution time scales of days for features with length scales of 10 m. The dependence of κ on τb varies for different transport theories and for high and low shear stress regimes. The US Army Corps of Engineers Field Research Facility, Duck, NC provided excellent logistical support. Funded by a National Security Science and Engineering Faculty Fellowship, a National Defense Science and Engineering Graduate Fellowship, and the Office of Naval Research.

Universality of the Peregrine Soliton in the Focusing Dynamics of the Cubic Nonlinear Schrödinger Equation

NASA Astrophysics Data System (ADS)

Tikan, Alexey; Billet, Cyril; El, Gennady; Tovbis, Alexander; Bertola, Marco; Sylvestre, Thibaut; Gustave, Francois; Randoux, Stephane; Genty, Goëry; Suret, Pierre; Dudley, John M.

2017-07-01

We report experimental confirmation of the universal emergence of the Peregrine soliton predicted to occur during pulse propagation in the semiclassical limit of the focusing nonlinear Schrödinger equation. Using an optical fiber based system, measurements of temporal focusing of high power pulses reveal both intensity and phase signatures of the Peregrine soliton during the initial nonlinear evolution stage. Experimental and numerical results are in very good agreement, and show that the universal mechanism that yields the Peregrine soliton structure is highly robust and can be observed over a broad range of parameters.

Numerical simulations of compressible mixing layers

NASA Technical Reports Server (NTRS)

Normand, Xavier

1990-01-01

Direct numerical simulations of two-dimensional temporally growing compressible mixing layers are presented. The Kelvin-Helmholtz instability is initially excited by a white-noise perturbation superimposed onto a hyperbolic tangent meanflow profile. The linear regime is studied at low resolution in the case of two flows of equal temperatures, for convective Mach numbers from 0.1 to 1 and for different values of the Reynolds number. At higher resolution, the complete evolution of a two-eddy mixing layer between two flows of different temperatures is simulated at moderate Reynolds number. Similarities and differences between flows of equal convective Mach numbers are discussed.

Concise calculation of the scaling function, exponents, and probability functional of the Edwards-Wilkinson equation with correlated noise

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yu, Y.; Pang, N.; Halpin-Healy, T.

1994-12-01

The linear Langevin equation proposed by Edwards and Wilkinson [Proc. R. Soc. London A 381, 17 (1982)] is solved in closed form for noise of arbitrary space and time correlation. Furthermore, the temporal development of the full probability functional describing the height fluctuations is derived exactly, exhibiting an interesting evolution between two distinct Gaussian forms. We determine explicitly the dynamic scaling function for the interfacial width for any given initial condition, isolate the early-time behavior, and discover an invariance that was unsuspected in this problem of arbitrary spatiotemporal noise.

A Hybrid Approach to Data Assimilation for Reconstructing the Evolution of Mantle Dynamics

NASA Astrophysics Data System (ADS)

Zhou, Quan; Liu, Lijun

2017-11-01

Quantifying past mantle dynamic processes represents a major challenge in understanding the temporal evolution of the solid earth. Mantle convection modeling with data assimilation is one of the most powerful tools to investigate the dynamics of plate subduction and mantle convection. Although various data assimilation methods, both forward and inverse, have been created, these methods all have limitations in their capabilities to represent the real earth. Pure forward models tend to miss important mantle structures due to the incorrect initial condition and thus may lead to incorrect mantle evolution. In contrast, pure tomography-based models cannot effectively resolve the fine slab structure and would fail to predict important subduction-zone dynamic processes. Here we propose a hybrid data assimilation approach that combines the unique power of the sequential and adjoint algorithms, which can properly capture the detailed evolution of the downgoing slab and the tomographically constrained mantle structures, respectively. We apply this new method to reconstructing mantle dynamics below the western U.S. while considering large lateral viscosity variations. By comparing this result with those from several existing data assimilation methods, we demonstrate that the hybrid modeling approach recovers the realistic 4-D mantle dynamics the best.

Iteration expansion and regional evolution: phylogeography of Dendrobium officinale and four related taxa in southern China

PubMed Central

Hou, Beiwei; Luo, Jing; Zhang, Yusi; Niu, Zhitao; Xue, Qingyun; Ding, Xiaoyu

2017-01-01

The genus Dendrobium was used as a case study to elucidate the evolutionary history of Orchidaceae in the Sino-Japanese Floristic Region (SJFR) and Southeast Asia region. These evolutionary histories remain largely unknown, including the temporal and spatial distribution of the evolutionary events. The present study used nuclear and plastid DNA to determine the phylogeography of Dendrobium officinale and four closely related taxa. Plastid DNA haplotype and nuclear data were shown to be discordant, suggesting reticulate evolution drove the species’ diversification. Rapid radiation and genetic drift appeared to drive the evolution of D. tosaense and D. flexicaule, whereas introgression or hybridization might have been involved in the evolution of D. scoriarum and D. shixingense. The phylogeographical structure of D. officinale revealed that core natural distribution regions might have served as its glacial refuges. In recent years, human disturbances caused its artificial migration and population extinction. The five taxa may have originated from the Nanling Mountains and the Yungui Plateau and then migrated northward or eastward. After the initial iteration expansion, D. officinale populations appeared to experience the regional evolutionary patterns in different regions and follow the sequential or rapid decline in gene exchange. PMID:28262789

The spatial-temporal evolution law of microseismic activities in the failure process of deep rock masses

NASA Astrophysics Data System (ADS)

Yuan-hui, Li; Gang, Lei; Shi-da, Xu; Da-wei, Wu

2018-07-01

Under high stress and blasting disturbance, the failure of deep rock masses is a complex, dynamic evolutionary process. To reveal the relation between macroscopic failure of deep rock masses and spatial-temporal evolution law of micro-cracking within, the initiation, extension, and connection of micro-cracks under blasting disturbance and the deformation and failure mechanism of deep rock masses were studied. The investigation was carried out using the microseismic (MS) monitoring system established in the deep mining area of Ashele Copper Mine (Xinjiang Uygur Autonomous Region, China). The results showed that the failure of the deep rock masses is a dynamic process accompanied with stress release and stress adjustment. It is not only related to the blasting-based mining, but also associated with zones of stress concentration formed due to the mining. In that space, the concentrated area in the cloud chart for the distribution of MS event density before failure of the rocks shows the basically same pattern with the damaged rocks obtained through scanning of mined-out areas, which indicates that the cloud chart can be used to determine potential risk areas of rocks in the spatial domain. In the time domain, relevant parameters of MS events presented different changes before the failure of the rocks: the energy index decreased while the cumulative apparent volume gradually increased, the magnitude distribution of microseismic events decreased rapidly, and the fractal dimension decreased at first and then remained stable. This demonstrates that the different changes in relevant MS parameters allow researchers to predict the failure time of the rocks. By analysing the dynamic evolution process of the failure of the deep rock masses, areas at potential risk can be predicted spatially and temporally. The result provides guidance for those involved in the safe production and management of underground engineering and establishes a theoretical basis for the study on the stability of deep rock masses.

Characteristics of temporal evolution of particle density and electron temperature in helicon discharge

NASA Astrophysics Data System (ADS)

Yang, Xiong; Cheng, Mousen; Guo, Dawei; Wang, Moge; Li, Xiaokang

2017-10-01

On the basis of considering electrochemical reactions and collision relations in detail, a direct numerical simulation model of a helicon plasma discharge with three-dimensional two-fluid equations was employed to study the characteristics of the temporal evolution of particle density and electron temperature. With the assumption of weak ionization, the Maxwell equations coupled with the plasma parameters were directly solved in the whole computational domain. All of the partial differential equations were solved by the finite element solver in COMSOL MultiphysicsTM with a fully coupled method. In this work, the numerical cases were calculated with an Ar working medium and a Shoji-type antenna. The numerical results indicate that there exist two distinct modes of temporal evolution of the electron and ground atom density, which can be explained by the ion pumping effect. The evolution of the electron temperature is controlled by two schemes: electromagnetic wave heating and particle collision cooling. The high RF power results in a high peak electron temperature while the high gas pressure leads to a low steady temperature. In addition, an OES experiment using nine Ar I lines was conducted using a modified CR model to verify the validity of the results by simulation, showing that the trends of temporal evolution of electron density and temperature are well consistent with the numerically simulated ones.

Climate change in the oceans: evolutionary versus phenotypically plastic responses of marine animals and plants

PubMed Central

Reusch, Thorsten B H

2014-01-01

I summarize marine studies on plastic versus adaptive responses to global change. Due to the lack of time series, this review focuses largely on the potential for adaptive evolution in marine animals and plants. The approaches were mainly synchronic comparisons of phenotypically divergent populations, substituting spatial contrasts in temperature or CO2 environments for temporal changes, or in assessments of adaptive genetic diversity within populations for traits important under global change. The available literature is biased towards gastropods, crustaceans, cnidarians and macroalgae. Focal traits were mostly environmental tolerances, which correspond to phenotypic buffering, a plasticity type that maintains a functional phenotype despite external disturbance. Almost all studies address coastal species that are already today exposed to fluctuations in temperature, pH and oxygen levels. Recommendations for future research include (i) initiation and analyses of observational and experimental temporal studies encompassing diverse phenotypic traits (including diapausing cues, dispersal traits, reproductive timing, morphology) (ii) quantification of nongenetic trans-generational effects along with components of additive genetic variance (iii) adaptive changes in microbe–host associations under the holobiont model in response to global change (iv) evolution of plasticity patterns under increasingly fluctuating environments and extreme conditions and (v) joint consideration of demography and evolutionary adaptation in evolutionary rescue approaches. PMID:24454551

Temporal evolution of ion spectral structures during a geomagnetic storm: Observations and modeling

NASA Astrophysics Data System (ADS)

Ferradas, C.; Zhang, J.; Spence, H. E.; Kistler, L. M.; Larsen, B.; Reeves, G. D.; Skoug, R. M.; Funsten, H. O.

2016-12-01

During the last decades several missions have recorded the presence of dynamic spectral features of energetic ions in the inner magnetosphere. We present a case study of the temporal evolution of H+, He+, and O+ spectral structures throughout the geomagnetic storm of 2 October 2013. We use data from the Helium, Oxygen, Proton, and Electron (HOPE) mass spectrometer onboard Van Allen Probe A to analyze the spectral structures in the energy range of 1- 50 keV. We find that the characteristics of the ion structures follow a cyclic pattern, the observed features changing dramatically as the storm starts and then returning to its initial pre-storm state. Quiet, pre-storm times are characterized by multiple and often complex flux structures at narrow energy bands. During the storm main phase, the observed features become simple, with no nose structures or only one nose structure present in the energy-time spectrograms. As the inner magnetosphere recovers from the storm, more complex structures appear once again. Additionally, the heavy ion spectral features are generally more complex than the H+ features, with multiple noses being observed more often in the heavy ion spectra. We use a model of ion drift and losses due to charge exchange to understand the formation of the spectral features and their species dependence.

Regulation of Ion Gradients across Myocardial Ischemic Border Zones: A Biophysical Modelling Analysis

PubMed Central

Niederer, Steven

2013-01-01

The myocardial ischemic border zone is associated with the initiation and sustenance of arrhythmias. The profile of ionic concentrations across the border zone play a significant role in determining cellular electrophysiology and conductivity, yet their spatial-temporal evolution and regulation are not well understood. To investigate the changes in ion concentrations that regulate cellular electrophysiology, a mathematical model of ion movement in the intra and extracellular space in the presence of ionic, potential and material property heterogeneities was developed. The model simulates the spatial and temporal evolution of concentrations of potassium, sodium, chloride, calcium, hydrogen and bicarbonate ions and carbon dioxide across an ischemic border zone. Ischemia was simulated by sodium-potassium pump inhibition, potassium channel activation and respiratory and metabolic acidosis. The model predicted significant disparities in the width of the border zone for each ionic species, with intracellular sodium and extracellular potassium having discordant gradients, facilitating multiple gradients in cellular properties across the border zone. Extracellular potassium was found to have the largest border zone and this was attributed to the voltage dependence of the potassium channels. The model also predicted the efflux of from the ischemic region due to electrogenic drift and diffusion within the intra and extracellular space, respectively, which contributed to depletion in the ischemic region. PMID:23577101

Rainfall-induced soil aggregate breakdown in field experiments at different rainfall intensities and initial soil moisture conditions

NASA Astrophysics Data System (ADS)

Shi, Pu; Thorlacius, Sigurdur; Keller, Thomas; Keller, Martin; Schulin, Rainer

2017-04-01

Soil aggregate breakdown under rainfall impact is an important process in interrill erosion, but is not represented explicitly in water erosion models. Aggregate breakdown not only reduces infiltration through surface sealing during rainfall, but also determines the size distribution of the disintegrated fragments and thus their availability for size-selective sediment transport and re-deposition. An adequate representation of the temporal evolution of fragment mass size distribution (FSD) during rainfall events and the dependence of this dynamics on factors such as rainfall intensity and soil moisture content may help improve mechanistic erosion models. Yet, little is known about the role of those factors in the dynamics of aggregate breakdown under field conditions. In this study, we conducted a series of artificial rainfall experiments on a field silt loam soil to investigate aggregate breakdown dynamics at different rainfall intensity (RI) and initial soil water content (IWC). We found that the evolution of FSD in the course of a rainfall event followed a consistent two-stage pattern in all treatments. The fragment mean weight diameter (MWD) drastically decreased in an approximately exponential way at the beginning of a rainfall event, followed by a further slow linear decrease in the second stage. We proposed an empirical model that describes this temporal pattern of MWD decrease during a rainfall event and accounts for the effects of RI and IWC on the rate parameters. The model was successfully tested using an independent dataset, showing its potential to be used in erosion models for the prediction of aggregate breakdown. The FSD at the end of the experimental rainfall events differed significantly among treatments, indicating that different aggregate breakdown mechanisms responded differently to the variation in initial soil moisture and rainfall intensity. These results provide evidence that aggregate breakdown dynamics needs to be considered in a case-specific manner in modelling sediment mobilization and transport during water erosion events.

Oxygen and Early Animal Evolution

NASA Astrophysics Data System (ADS)

Xiao, S.

2012-12-01

It is often hypothesized that the rise of animals was triggered by an increase in O2 levels in the atmosphere and oceans. However, this hypothesis is remarkably difficult to test, because the timing of animal divergences is poorly resolved, the physiology of early animals is often unknown, estimates of past pO2 levels come with large error bars, and causal relationships between oxygenation and animal evolution are difficult to establish. Nonetheless, existing phylogenetic, paleontological, and geochemical data indicate that the evolution of macroscopic animals and motile macrometazoans with energetically expensive lifestyles may be temporally coupled with ocean oxygenation events in the Ediacaran Period. Thus, it is plausible that ocean oxygenation may have been a limiting factor in the early evolution of macroscopic, complex, and metabolically aggressive animals (particularly bilaterian animals). However, ocean oxygenation and animal evolution were likely engaged in two-way interactions: Ediacaran oxygenation may have initially lifted a physiological barrier for the evolution of animal size, motility, and active lifestyles, but subsequent animal diversification in the Paleozoic may have also changed oceanic redox structures. Viewed in a broader context, the early evolutionary history of animals was contingent upon a series of events, including genetic preparation (developmental genetics), environmental facilitation (oceanic oxygenation), and ecological escalation (Cambrian explosion), but the rise of animals to ecological importance also had important geobiological impacts on oceanic redox structures, sedimentary fabrics, and global geochemical cycles.

Experimental research on time-resolved evolution of cathode plasma expansion velocity in a long pulsed magnetically insulated coaxial diode

NASA Astrophysics Data System (ADS)

Zhu, Danni; Zhang, Jun; Zhong, Huihuang; Ge, Xingjun; Gao, Jingming

2018-02-01

Unlike planar diodes, separate research of the axial and radial plasma expansion velocities is difficult for magnetically insulated coaxial diodes. Time-resolved electrical diagnostic which is based on the voltage-ampere characteristics has been employed to study the temporal evolution of the axial and radial cathode plasma expansion velocities in a long pulsed magnetically insulated coaxial diode. Different from a planar diode with a "U" shaped profile of temporal velocity evolution, the temporal evolution trend of the axial expansion velocity is proved to be a "V" shaped profile. Apart from the suppression on the radial expansion velocity, the strong magnetic field is also conducive to slowing down the axial expansion velocity. Compared with the ordinary graphite cathode, the carbon velvet and graphite composite cathode showed superior characteristics as judged by the low plasma expansion velocity and long-term electrical stability as a promising result for applications where long-pulsed and reliable operation at high power is required.

Violence in the prehistoric period of Japan: the spatio-temporal pattern of skeletal evidence for violence in the Jomon period.

PubMed

Nakao, Hisashi; Tamura, Kohei; Arimatsu, Yui; Nakagawa, Tomomi; Matsumoto, Naoko; Matsugi, Takehiko

2016-03-01

Whether man is predisposed to lethal violence, ranging from homicide to warfare, and how that may have impacted human evolution, are among the most controversial topics of debate on human evolution. Although recent studies on the evolution of warfare have been based on various archaeological and ethnographic data, they have reported mixed results: it is unclear whether or not warfare among prehistoric hunter-gatherers was common enough to be a component of human nature and a selective pressure for the evolution of human behaviour. This paper reports the mortality attributable to violence, and the spatio-temporal pattern of violence thus shown among ancient hunter-gatherers using skeletal evidence in prehistoric Japan (the Jomon period: 13 000 cal BC-800 cal BC). Our results suggest that the mortality due to violence was low and spatio-temporally highly restricted in the Jomon period, which implies that violence including warfare in prehistoric Japan was not common. © 2016 The Author(s).

Violence in the prehistoric period of Japan: the spatio-temporal pattern of skeletal evidence for violence in the Jomon period

PubMed Central

Nakao, Hisashi; Tamura, Kohei; Arimatsu, Yui; Nakagawa, Tomomi; Matsumoto, Naoko; Matsugi, Takehiko

2016-01-01

Whether man is predisposed to lethal violence, ranging from homicide to warfare, and how that may have impacted human evolution, are among the most controversial topics of debate on human evolution. Although recent studies on the evolution of warfare have been based on various archaeological and ethnographic data, they have reported mixed results: it is unclear whether or not warfare among prehistoric hunter–gatherers was common enough to be a component of human nature and a selective pressure for the evolution of human behaviour. This paper reports the mortality attributable to violence, and the spatio-temporal pattern of violence thus shown among ancient hunter–gatherers using skeletal evidence in prehistoric Japan (the Jomon period: 13 000 cal BC–800 cal BC). Our results suggest that the mortality due to violence was low and spatio-temporally highly restricted in the Jomon period, which implies that violence including warfare in prehistoric Japan was not common. PMID:27029838

Real time analysis of self-assembled InAs/GaAs quantum dot growth by probing reflection high-energy electron diffraction chevron image

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kudo, Takuya; Inoue, Tomoya; Kita, Takashi

2008-10-01

Self-assembling process of InAs/GaAs quantum dots has been investigated by analyzing reflection high-energy electron diffraction chevron images reflecting the crystal facet structure surrounding the island. The chevron image shows dramatic changes during the island formation. From the temporal evolution of the chevron tail structure, the self-assembling process has been found to consist of four steps. The initial islands do not show distinct facet structures. Then, the island surface is covered by high-index facets, and this is followed by the formation of stable low-index facets. Finally, the flow of In atoms from the islands occurs, which contributes to flatten the wettingmore » layer. Furthermore, we have investigated the island shape evolution during the GaAs capping layer growth by using the same real-time analysis technique.« less

Extended space expectation values in quantum dynamical system evolutions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Demiralp, Metin

2014-10-06

The time variant power series expansion for the expectation value of a given quantum dynamical operator is well-known and well-investigated issue in quantum dynamics. However, depending on the operator and Hamiltonian singularities this expansion either may not exist or may not converge for all time instances except the beginning of the evolution. This work focuses on this issue and seeks certain cures for the negativities. We work in the extended space obtained by adding all images of the initial wave function under the system Hamiltonian’s positive integer powers. This requires the introduction of certain appropriately defined weight operators. The resultingmore » better convergence in the temporal power series urges us to call the new defined entities “extended space expectation values” even though they are constructed over certain weight operators and are somehow pseudo expectation values.« less

Direct Numerical Simulation of Passive Scalar Mixing in Shock Turbulence Interaction

NASA Astrophysics Data System (ADS)

Gao, Xiangyu; Bermejo-Moreno, Ivan; Larsson, Johan

2017-11-01

Passive scalar mixing in the canonical shock-turbulence interaction configuration is investigated through shock-capturing Direct Numerical Simulations (DNS). Scalar fields with different Schmidt numbers are transported by an initially isotropic turbulent flow field passing across a nominally planar shock wave. A solution-adaptive hybrid numerical scheme on Cartesian structured grids is used, that combines a fifth-order WENO scheme near shocks and a sixth-order central-difference scheme away from shocks. The simulations target variations in the shock Mach number, M (from 1.5 to 3), turbulent Mach number, Mt (from 0.1 to 0.4, including wrinkled- and broken-shock regimes), and scalar Schmidt numbers, Sc (from 0.5 to 2), while keeping the Taylor microscale Reynolds number constant (Reλ 40). The effects on passive scalar statistics are investigated, including the streamwise evolution of scalar variance budgets, pdfs and spectra, in comparison with their temporal evolution in decaying isotropic turbulence.

On the Evolution of Terrestrial Planets: Implications of Evolutionary Paths and Evolving Lid-States

NASA Astrophysics Data System (ADS)

Weller, M. B.; Lenardic, A.

2015-12-01

Growing geodynamic and geochemical evidence suggests that plate tectonics may not have operated on the early Earth, with both the timing of its onset and the length of its activity far from certain [e.g., 1, 2, and references therein]. Accordingly, information from current observations and processes have the potential of sampling portions of the Earth that has both formed under and been modified by differing tectonic regimes. Here we use coupled 3D mantle convection and planetary tectonics simulations to explore evolutionary paths and planetary tectonic regimes. Early in the geologic lifetime of a terrestrial planet, high mantle temperatures favour stagnant-lids. As radiogenics decay, an initial stagnant-lid may yield into a high temperature mobile-lid state. The transition from an initial stagnant-lid is a function of yield strength, in addition to both internal and surface temperatures. Each lid-state has specific diagnostics and implications for internal parameters, and consequently planetary evolution. The implication within this framework is that a system with a different thermal evolution has the potential to migrate through tectonic regimes at the same 'thermal time' (e.g. temperature), but very different 'temporal times'. This indicate that multiple modes of convection and surface tectonics can potentially operate on a single planetary body at different times in its evolution, as consequence of changing internal parameters, surface temperatures, and differing thermal histories. We will discuss the implications of terrestrial worlds that can alternate, and be offset between multiple tectonic states over giga-year timescales. [1] O'Neill et. al. (2013b) Geol. Soc. London; [2] Weller et al. (2015) EPSL

Seizure semiology reflects spread from frontal to temporal lobe: evolution of hyperkinetic to automotor seizures as documented by invasive EEG video recordings.

PubMed

Tezer, Fadime Irsel; Agan, Kadriye; Borggraefe, Ingo; Noachtar, Soheyl

2013-09-01

This patient report demonstrates the importance of seizure evolution in the localising value of seizure semiology. Spread of epileptic activity from frontal to temporal lobe, as demonstrated by invasive recordings, was reflected by change from hyperkinetic movements to arrest of activity with mild oral and manual automatisms. [Published with video sequences].

Basin deconstruction-construction: Seeking thermal-tectonic consistency through the integration of geochemical thermal indicators and seismic fault mechanical stratigraphy ​- Example from Faras Field, North Western Desert, Egypt

NASA Astrophysics Data System (ADS)

Pigott, John D.; Abouelresh, Mohamed O.

2016-02-01

To construct a model of a sedimentary basin's thermal tectonic history is first to deconstruct it: taking apart its geological elements, searching for its initial conditions, and then to reassemble the elements in the temporal order that the basin is assumed to have evolved. Two inherent difficulties implicit to the analysis are that most organic thermal indicators are cumulative, irreversible and a function of both temperature and time and the non-uniqueness of crustal strain histories which complicates tectonic interpretations. If the initial conditions (e.g. starting maturity of the reactants and initial crustal temperature) can be specified and the boundary conditions incrementally designated from changes in the lithospheric heat engine owing to stratigraphic structural constraints, then the number of pathways for the temporal evolution of a basin is greatly reduced. For this investigation, model input uncertainties are reduced through seeking a solution that iteratively integrates the geologically constrained tectonic subsidence, geochemically constrained thermal indicators, and geophysically constrained fault mechanical stratigraphy. The Faras oilfield in the Abu Gharadig Basin, North Western Desert, Egypt, provides an investigative example of such a basin's deconstructive procedure. Multiple episodes of crustal extension and shortening are apparent in the tectonic subsidence analyses which are constrained from the fault mechanical stratigraphy interpreted from reflection seismic profiles. The model was iterated with different thermal boundary conditions until outputs best fit the geochemical observations. In so doing, the thermal iterations demonstrate that general relationship that basin heat flow increases decrease vertical model maturity gradients, increases in surface temperatures shift vertical maturity gradients linearly to higher values, increases in sediment conductivities lower vertical maturities with depth, and the addition of ;ghost; layers (those layers removed) prior to the erosional event increase maturities beneath, and conversely. These integrated constraints upon the basin evolution model indicate that the principal source rocks, Khatatba and the lowest part of the Alam El Bueib formations, entered the oil window at approximately 95 Ma and the gas window at approximately 25 Ma. The upper part of the Alam El Bueib Formation is within the oil window at the present day. Establishing initial and boundary value conditions for a basin's thermal evolution when geovalidated by the integration of seismic fault mechanical stratigraphy, tectonic subsidence analysis, and organic geochemical maturity indicators provides a powerful tool for optimizing petroleum exploration in both mature and frontier basins.

The temporal evolution of pyroclast ejection velocity and exit trajectory, a laboratory case study.

NASA Astrophysics Data System (ADS)

Cigala, Valeria; Kueppers, Ulrich; José Peña Fernández, Juan; Sesterhenn, Jörn; Taddeucci, Jacopo; Dingwell, Donald Bruce

2017-04-01

Pyroclast ejection dynamics during explosive volcanic eruptions are highly variable. This variability is due to complex interaction among different parameters, which define the boundary conditions for a certain eruption. Scaled and controlled laboratory experiments come in hand to characterize the effect of specific physical parameters on the ejection dynamics. We focus, in particular, on the dynamics of pyroclasts ejection in the region just above the vent, also called gas-thrust region, for the case of impulsively released gas-pyroclast mixtures (i.e., unsteady eruptions). In this study, gas-particle mixtures were released in a series of shock-tube experiments with varying 1) tube length, 2) vent geometry, 3) gas-particle ratio, 4) initial temperature and 5) particle size distribution. The tube length was varied by changing the starting sample load, resulting in a gas-particle ratio of 1, 2.5 and 8, respectively. Thereby, the initial distance of the sample from the exit varied between 320, 230 and 140 mm, respectively, allowing for variable time for accelerating (and possibly decelerating) the particles prior to exit. Moreover, four vent geometries were employed, a nozzle with converging walls (5°), a cylinder and two funnels with walls diverging at 15° and 30° respectively. All of them are characterized by a value h/D=1.07, where h is the length between the throat and the lip of the vent and D is throat diameter. The experiments were performed at both 500°C and room temperature using particles from 2 to 0.125 mm in diameter. In all experiments, initial pressure was 15 MPa. High speed videos of the ejection behaviour were analyzed to obtain the temporal evolution of particle velocity and exit trajectory depending on boundary conditions. Max velocity of 300 m/s was observed together with a non-linear decay of exit velocity over time. The exit trajectories were found to deviate from the vertical by 5° to 45° and also display a non-linear evolution with time. Moreover, the velocity decay was used to investigate the accuracy of the empirical fragmentation depth model from Alatorre-Ibargüengoitia et al. (2011), when different gas-particle ratios are employed. This model is not reproducing all experimental constellations satisfactorily. Further experiments will help to develop this model further. Vent geometry, particle size and temperature show the largest effect on ejection velocity and trajectory. In particular, we observed a positive correlation of velocity with 1) diverging vent walls and 2) temperature and a negative correlation with 1) starting tube length and 2) particle size. On the other hand, exit trajectories show negative correlation with 1) diverging walls, 2) starting tube length, 3) temperature and 4) particle size. Moreover, we found that gas-particle ratio additionally strongly affects the temporal evolution of particle ejection velocity and trajectory. These results highlight the importance of scaled and repeatable laboratory experiments for an enhanced understanding of natural volcanic phenomena that bear direct observability. A closer link will enhance volcanic hazard assessment.

Dynamical structure of extreme ultraviolet macrospicules

NASA Technical Reports Server (NTRS)

Karovska, Margarita; Habbal, Shadia Rifai

1994-01-01

We describe the substructures forming the macrospicules and their temporal evolution, as revealed by the application of an image enhancement algorithm to extreme ultraviolet (EUV) observations of macrospicules. The enhanced images uncover, for the first time, the substructures forming the column-like structures within the macrospicules and the low-lying arches at their base. The spatial and temporal evolution of macrospicules clearly show continuous interaction between these substructures with occasional ejection of plasma following a ballistic trajectory. We comment on the importance of these results for planning near future space observations of macrospicules with better temporal and spatial resolution.

Evolution of dispersal in spatially and temporally variable environments: The importance of life cycles.

PubMed

Massol, François; Débarre, Florence

2015-07-01

Spatiotemporal variability of the environment is bound to affect the evolution of dispersal, and yet model predictions strongly differ on this particular effect. Recent studies on the evolution of local adaptation have shown that the life cycle chosen to model the selective effects of spatiotemporal variability of the environment is a critical factor determining evolutionary outcomes. Here, we investigate the effect of the order of events in the life cycle on the evolution of unconditional dispersal in a spatially heterogeneous, temporally varying landscape. Our results show that the occurrence of intermediate singular strategies and disruptive selection are conditioned by the temporal autocorrelation of the environment and by the life cycle. Life cycles with dispersal of adults versus dispersal of juveniles, local versus global density regulation, give radically different evolutionary outcomes that include selection for total philopatry, evolutionary bistability, selection for intermediate stable states, and evolutionary branching points. Our results highlight the importance of accounting for life-cycle specifics when predicting the effects of the environment on evolutionarily selected trait values, such as dispersal, as well as the need to check the robustness of model conclusions against modifications of the life cycle. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Radiocarbon constraints on the extent and evolution of the South Pacific glacial carbon pool

PubMed Central

Ronge, T. A.; Tiedemann, R.; Lamy, F.; Köhler, P.; Alloway, B. V.; De Pol-Holz, R.; Pahnke, K.; Southon, J.; Wacker, L.

2016-01-01

During the last deglaciation, the opposing patterns of atmospheric CO2 and radiocarbon activities (Δ14C) suggest the release of 14C-depleted CO2 from old carbon reservoirs. Although evidences point to the deep Pacific as a major reservoir of this 14C-depleted carbon, its extent and evolution still need to be constrained. Here we use sediment cores retrieved along a South Pacific transect to reconstruct the spatio-temporal evolution of Δ14C over the last 30,000 years. In ∼2,500–3,600 m water depth, we find 14C-depleted deep waters with a maximum glacial offset to atmospheric 14C (ΔΔ14C=−1,000‰). Using a box model, we test the hypothesis that these low values might have been caused by an interaction of aging and hydrothermal CO2 influx. We observe a rejuvenation of circumpolar deep waters synchronous and potentially contributing to the initial deglacial rise in atmospheric CO2. These findings constrain parts of the glacial carbon pool to the deep South Pacific. PMID:27157845

FTIR study of CO2 and H2O/CO2 nanoparticles and their temporal evolution at 80 K.

PubMed

Taraschewski, M; Cammenga, H K; Tuckermann, R; Bauerecker, S

2005-04-21

Fourier transform infrared (FTIR) spectroscopy combined with a long-path collisional cooling cell was used to investigate the temporal evolution of CO2 nanoparticles and binary H2O/CO2 nanocomposites in the aerosol phase at 80 K. The experimental conditions for the formation of different CO2 particle shapes as slab, shell, sphere, cube, and needle have been studied by comparison with calculated data from the literature. The H2O/CO2 nanoparticles were generated with a newly developed multiple-pulse injection technique and with the simpler flow-in technique. The carbon dioxide nu3-vibration band at 2360 cm(-1) and the water ice OH-dangling band at 3700 cm(-1) were used to study the evolution of structure, shape, and contact area of the nanocomposites over 150 s. Different stages of binary nanocomposites with primary water ice cores were identified dependent on the injected CO2 portion: (a) disordered (amorphous) CO2 slabs on water particle surfaces, (b) globular crystalline CO2 humps sticking on the water cores, and (c) water cores being completely enclosed in bigger predominantly crystalline CO2 nanoparticles. However, regular CO2 shell structures on primary water particles showing both longitudinal (LO) and transverse (TO) optical mode features of the nu3-vibration band could not be observed. Experiments with reversed nucleation order indicate that H2O/CO2 composite particles with different initial structures evolve toward similar molecular nanocomposites with separated CO2 and H2O regions.

Investigation of local thermodynamic equilibrium of laser induced Al{sub 2}O{sub 3}–TiC plasma in argon by spatially resolved optical emission spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alnama, K.; Alkhawwam, A.; Jazmati, A. K., E-mail: pscientific5@aec.org.sy

Plasma plume of Al{sub 2}O{sub 3}–TiC is generated by third harmonic Q-switched Nd:YAG nanosecond laser. It is characterized using Optical Emission Spectroscopy (OES) at different argon background gas pressures 10, 10{sup 2}, 10{sup 3}, 10{sup 4} and 10{sup 5} Pa. Spatial evolution of excitation and ionic temperatures is deduced from spectral data analysis. Temporal evolution of Ti I emission originated from different energy states is probed. The correlation between the temporal behavior and the spatial temperature evolution are investigated under LTE condition for the possibility to use the temporal profile of Ti I emission as an indicator for LTE validitymore » in the plasma.« less

Evolutionary Grids of Accreting White Dwarf Companions in Cataclysmic Variables

NASA Astrophysics Data System (ADS)

Benjamin, J.; Jensen, M.; Nadeau, S.; Nelson, L. A.

2003-12-01

We analyze the evolution of accreting white dwarfs in binary systems for a wide range of initial conditions. Specifically, evolutionary tracks are calculated for CO white dwarfs with masses in the range of 0.6 - 1.3 solar masses and accreting H-rich gas at rates of between 10-6 to 10-10 solar masses per year. Since the white dwarfs in these binaries could be very young or very old at the onset of mass transfer we simulated this possibility by investigating the evolution for a large range of internal temperatures. Thus most of the sequences generated were not thermally relaxed at the onset of mass transfer (and the thermonuclear flashes were not cyclic). We discuss the temporal dependence of the interior properties (envelope readjustment on a thermal timescale and compressional heating) on the initial conditions. Particular attention is paid to the white dwarfs accretors that remained small (relative to the Roche lobe radius) during the shell flash event. Finally, we use the results of these models to comment on the observed properties of Supersoft X-ray sources. This research was supported in part by funds from the Natural Sciences and Engineering Research Council (Canada).

Finite-size effects in the dynamics of few bosons in a ring potential

NASA Astrophysics Data System (ADS)

Eriksson, G.; Bengtsson, J.; Karabulut, E. Ö.; Kavoulakis, G. M.; Reimann, S. M.

2018-02-01

We study the temporal evolution of a small number N of ultra-cold bosonic atoms confined in a ring potential. Assuming that initially the system is in a solitary-wave solution of the corresponding mean-field problem, we identify significant differences in the time evolution of the density distribution of the atoms when it instead is evaluated with the many-body Schrödinger equation. Three characteristic timescales are derived: the first is the period of rotation of the wave around the ring, the second is associated with a ‘decay’ of the density variation, and the third is associated with periodic ‘collapses’ and ‘revivals’ of the density variations, with a factor of \\sqrt{N} separating each of them. The last two timescales tend to infinity in the appropriate limit of large N, in agreement with the mean-field approximation. These findings are based on the assumption of the initial state being a mean-field state. We confirm this behavior by comparison to the exact solutions for a few-body system stirred by an external potential. We find that the exact solutions of the driven system exhibit similar dynamical features.

Isotopic anomalies - Chemical memory of Galactic evolution

NASA Technical Reports Server (NTRS)

Clayton, Donald D.

1988-01-01

New mechanisms for the chemical memory of isotopic anomalies are proposed which are based on the temporal change during the chemical evolution of the Galaxy of the isotopic composition of the mean ejecta from stars. Because of the differing temporal evolution of primary and secondary products of nucleosynthesis, the isotopic composition of the bulk interstellar medium changes approximately linearly with time, and thus any dust component having an age different from that of average dust will be isotopically anomalous. Special attention is given to C, O, Mg, Si, and isotopically heavy average-stellar condensates of SiC.

Mapping the spatio-temporal evolution of irrigation in the Coastal Plain of Georgia, USA

Treesearch

Marcus D. Williams; Christie M.S. Hawley; Marguerite Madden; J. Marshall Shepherd

2017-01-01

This study maps the spatial and temporal evolution of acres irrigated in the Coastal Plain of Georgia over a 38 year period. The goal of this analysis is to create a time-series of irrigated areas in the Coastal Plain of Georgia at a sub-county level. From 1976 through 2013, Landsat images were obtained and sampled at four year intervals to manually...

Effect of Swirl on Turbulent Structures in Supersonic Jets

NASA Technical Reports Server (NTRS)

Rao, Ram Mohan; Lundgren, Thomas S.

1998-01-01

Direct Numerical Simulation (DNS) is used to study the mechanism of generation and evolution of turbulence structures in a temporally evolving supersonic swirling round jet and also to examine the resulting acoustic radiations. Fourier spectral expansions are used in the streamwise and azimuthal directions and a 1-D b-spline Galerkin representation is used in the radial direction. Spectral-like accuracy is achieved using this numerical scheme. Direct numerical simulations, using the b-spline spectral method, are carried out starting from mean flow initial conditions which are perturbed by the most unstable linear stability eigenfunctions. It is observed that the initial helical instability waves evolve into helical vortices which eventually breakdown into smaller scales of turbulence. 'Rib' structures similar to those seen in incompressible mixing layer flow of Rogers and Moserl are observed. The jet core breakdown stage exhibits increased acoustic radiations.

Networked Thermodynamic Boundary Layer Profiling with AERIs during the PECAN Field Campaign

NASA Astrophysics Data System (ADS)

Gero, P. J.; Turner, D. D.; Hackel, D.; Phillips, C.; Smith, N.; Wagner, T.

2015-12-01

The Plains Elevated Convection at Night (PECAN) campaign was a large-scale field experiment in the Great Plains region of the U.S. that was conducted in June-July 2015. Nocturnal storms provide the majority of the precipitation in the Great Plains, yet the initiation and evolution of nocturnal convection is not understood to the same level as daytime surface-based convection, and thus provides significant challenges for operational weather forecasters. PECAN's objectives were to study elevated nocturnal convection initiation and the lifecycle of nocturnal convection. Specific research areas that were studied were the evolution of mesoscale convective systems, the structure and evolution of nocturnal low-level jets, atmospheric bores, and elevated convection initiation. A broad range of fixed and mobile observing systems were deployed by several agencies and organizations in a domain centered around Kansas. The Atmospheric Emitted Radiance Interferometer (AERI) is a ground-based instrument that measures downwelling infrared radiance from the atmosphere. AERI observations can be used to obtain vertical profiles of tropospheric temperature and water vapor in the lowest 3 km of the troposphere, as well as measurements of the concentration of various trace gases and microphysical and optical properties of clouds and aerosols. A network of eight AERIs was deployed in the domain during PECAN, with six at fixed sites and two in mobile facilities. One of the goals of the campaign was a demonstration of the use of real-time high-temporal-resolution boundary layer profiles from the network of AERIs for characterizing the mesoscale environment and its evolution during the weather events sampled during PECAN. If successful, a future network could be implemented across CONUS and thermodynamic profiles in the boundary layer data assimilated to help improve numerical weather prediction. We present an overview of the AERI deployments, a summary of the technique used to retrieve thermodynamic profiles from the AERI's observed radiances, and results from the AERI retrievals in different atmospheric conditions.

Quantization of systems with temporally varying discretization. II. Local evolution moves

NASA Astrophysics Data System (ADS)

Höhn, Philipp A.

2014-10-01

Several quantum gravity approaches and field theory on an evolving lattice involve a discretization changing dynamics generated by evolution moves. Local evolution moves in variational discrete systems (1) are a generalization of the Pachner evolution moves of simplicial gravity models, (2) update only a small subset of the dynamical data, (3) change the number of kinematical and physical degrees of freedom, and (4) generate a dynamical (or canonical) coarse graining or refining of the underlying discretization. To systematically explore such local moves and their implications in the quantum theory, this article suitably expands the quantum formalism for global evolution moves, constructed in Paper I [P. A. Höhn, "Quantization of systems with temporally varying discretization. I. Evolving Hilbert spaces," J. Math. Phys. 55, 083508 (2014); e-print arXiv:1401.6062 [gr-qc

The three-dimensional evolution of a plane mixing layer. Part 1: The Kelvin-Helmholtz roll-up

NASA Technical Reports Server (NTRS)

Rogers, Michael M.; Moser, Robert D.

1991-01-01

The Kelvin Helmholtz roll up of three dimensional, temporally evolving, plane mixing layers were simulated numerically. All simulations were begun from a few low wavenumber disturbances, usually derived from linear stability theory, in addition to the mean velocity profile. The spanwise disturbance wavelength was taken to be less than or equal to the streamwise wavelength associated with the Kelvin Helmholtz roll up. A standard set of clean structures develop in most of the simulations. The spanwise vorticity rolls up into a corrugated spanwise roller, with vortex stretching creating strong spanwise vorticity in a cup shaped region at the vends of the roller. Predominantly streamwise rib vortices develop in the braid region between the rollers. For sufficiently strong initial three dimensional disturbances, these ribs collapse into compact axisymmetric vortices. The rib vortex lines connect to neighboring ribs and are kinked in the opposite direction of the roller vortex lines. Because of this, these two sets of vortex lines remain distinct. For certain initial conditions, persistent ribs do not develop. In such cases the development of significant three dimensionality is delayed. When the initial three dimensional disturbance energy is about equal to, or less than, the two dimensional fundamental disturbance energy, the evolution of the three dimensional disturbance is nearly linear (with respect to the mean and the two dimensional disturbances), at least until the first Kelvin Helmholtz roll up is completed.

Initiation of secondary ice production in clouds

NASA Astrophysics Data System (ADS)

Sullivan, Sylvia C.; Hoose, Corinna; Kiselev, Alexei; Leisner, Thomas; Nenes, Athanasios

2018-02-01

Disparities between the measured concentrations of ice-nucleating particles (INPs) and in-cloud ice crystal number concentrations (ICNCs) have led to the hypothesis that mechanisms other than primary nucleation form ice in the atmosphere. Here, we model three of these secondary production mechanisms - rime splintering, frozen droplet shattering, and ice-ice collisional breakup - with a six-hydrometeor-class parcel model. We perform three sets of simulations to understand temporal evolution of ice hydrometeor number (Nice), thermodynamic limitations, and the impact of parametric uncertainty when secondary production is active. Output is assessed in terms of the number of primarily nucleated ice crystals that must exist before secondary production initiates (NINP(lim)) as well as the ICNC enhancement from secondary production and the timing of a 100-fold enhancement. Nice evolution can be understood in terms of collision-based nonlinearity and the phasedness of the process, i.e., whether it involves ice hydrometeors, liquid ones, or both. Ice-ice collisional breakup is the only process for which a meaningful NINP(lim) exists (0.002 up to 0.15 L-1). For droplet shattering and rime splintering, a warm enough cloud base temperature and modest updraft are the more important criteria for initiation. The low values of NINP(lim) here suggest that, under appropriate thermodynamic conditions for secondary ice production, perturbations in cloud concentration nuclei concentrations are more influential in mixed-phase partitioning than those in INP concentrations.

Intensive time series data exploitation: the Multi-sensor Evolution Analysis (MEA) platform

NASA Astrophysics Data System (ADS)

Mantovani, Simone; Natali, Stefano; Folegani, Marco; Scremin, Alessandro

2014-05-01

The monitoring of the temporal evolution of natural phenomena must be performed in order to ensure their correct description and to allow improvements in modelling and forecast capabilities. This assumption, that is obvious for ground-based measurements, has not always been true for data collected through space-based platforms: except for geostationary satellites and sensors, that allow providing a very effective monitoring of phenomena with geometric scale from regional to global; smaller phenomena (with characteristic dimension lower than few kilometres) have been monitored with instruments that could collect data only with a time interval in the order of several days; bi-temporal techniques have been the most used ones for years, in order to characterise temporal changes and try identifying specific phenomena. The more the number of flying sensor has grown and their performance improved, the more their capability of monitoring natural phenomena at a smaller geographic scale has grown: we can now count on tenth of years of remotely sensed data, collected by hundreds of sensors that are now accessible from a wide users' community, and the techniques for data processing have to be adapted to move toward a data intensive exploitation. Starting from 2008, the European Space Agency has initiated the development of the Multi-sensor Evolution Analysis (MEA) platform (https://mea.eo.esa.int), whose first aim was to permit the access and exploitation of long term remotely sensed satellite data from different platforms: 15 years of global (A)ATSR data together with 5 years of regional AVNIR-2 data were loaded into the system and were used, through a web-based graphic user interface, for land cover change analysis. The MEA data availability has grown during years integrating multi-disciplinary data that feature spatial and temporal dimensions: so far tenths of Terabytes of data in the land and atmosphere domains are available and can be visualized and exploited, keeping the time dimension as the most relevant one (https://mea.eo.esa.int/data_availability.html). MEA is also used as Climate Data gateway in the framework of the FP7 EarthServer Project. In the present work, principles of the MEA platform are presented, emphasizing the general concept and the methods that have been implemented for data access (including OGC standard data access) and exploitation. In order to show its effectiveness, use cases focused on multi-field and multi-temporal data analysis are shown.

Spatio-Temporal Evolution and Scaling Properties of Human Settlements (Invited)

NASA Astrophysics Data System (ADS)

Small, C.; Milesi, C.; Elvidge, C.; Baugh, K.; Henebry, G. M.; Nghiem, S. V.

2013-12-01

Growth and evolution of cities and smaller settlements is usually studied in the context of population and other socioeconomic variables. While this is logical in the sense that settlements are groups of humans engaged in socioeconomic processes, our means of collecting information about spatio-temporal distributions of population and socioeconomic variables often lack the spatial and temporal resolution to represent the processes at scales which they are known to occur. Furthermore, metrics and definitions often vary with country and through time. However, remote sensing provides globally consistent, synoptic observations of several proxies for human settlement at spatial and temporal resolutions sufficient to represent the evolution of settlements over the past 40 years. We use several independent but complementary proxies for anthropogenic land cover to quantify spatio-temporal (ST) evolution and scaling properties of human settlements globally. In this study we begin by comparing land cover and night lights in 8 diverse settings - each spanning gradients of population density and degree of land surface modification. Stable anthropogenic night light is derived from multi-temporal composites of emitted luminance measured by the VIIRS and DMSP-OLS sensors. Land cover is represented as mixtures of sub-pixel fractions of rock, soil and impervious Substrates, Vegetation and Dark surfaces (shadow, water and absorptive materials) estimated from Landsat imagery with > 94% accuracy. Multi-season stability and variability of land cover fractions effectively distinguishes between spectrally similar land covers that corrupt thematic classifications based on single images. We find that temporal stability of impervious substrates combined with persistent shadow cast between buildings results in temporally stable aggregate reflectance across seasons at the 30 m scale of a Landsat pixel. Comparison of night light brightness with land cover composition, stability and variability yields several consistent relationships that persist across a variety of settlement types and physical environments. We use the multiple threshold method of Small et al (2011) to represent a continuum of settlement density by segmenting both night light brightness and multi-season land cover characteristics. Rank-size distributions of spatially contiguous segments quantify scaling and connectivity of land cover. Spatial and temporal evolution of rank-size distributions is consistent with power laws as suggested by Zipf's Law for city size based on population. However, unlike Zipf's Law, the observed distributions persist to global scales in which the larger agglomerations are much larger than individual cities. The scaling relations observed extend from the scale of cities and smaller settlements up to vast spatial networks of interconnected settlements.

Spatiotemporal evolution of hairpin eddies, Reynolds stress, and polymer torque in polymer drag-reduced turbulent channel flows.

PubMed

Kim, Kyoungyoun; Sureshkumar, Radhakrishna

2013-06-01

To study the influence of dynamic interactions between turbulent vortical structures and polymer stress on turbulent friction drag reduction, a series of simulations of channel flow is performed. We obtain self-consistent evolution of an initial eddy in the presence of polymer stresses by utilizing the finitely extensible nonlinear elastic-Peterlin (FENE-P) model. The initial eddy is extracted by the conditional averages for the second quadrant event from fully turbulent Newtonian flow, and the initial polymer conformation fields are given by the solutions of the FENE-P model equations corresponding to the mean shear flow in the Newtonian case. At a relatively low Weissenberg number We(τ) (=50), defined as the ratio of the polymer relaxation time to the wall time scale, the generation of new vortices is inhibited by polymer-induced countertorques. Thus fewer vortices are generated in the buffer layer. However, the head of the primary hairpin is unaffected by the polymer stress. At larger We(τ) values (≥100), the hairpin head becomes weaker and vortex autogeneration and Reynolds stress growth are almost entirely suppressed. The temporal evolution of the vortex strength and polymer torque magnitude reveals that polymer extension by the vortical motion results in a polymer torque that increases in magnitude with time until a maximum value is reached over a time scale comparable to the polymer relaxation time. The polymer torque retards the vortical motion and Reynolds stress production, which in turn weakens flow-induced chain extension and torque itself. An analysis of the vortex time scales reveals that with increasing We(τ), vortical motions associated with a broader range of time scales are affected by the polymer stress. This is qualitatively consistent with Lumley's time criterion for the onset of drag reduction.

Damage control resuscitation: history, theory and technique

PubMed Central

Ball, Chad G.

2014-01-01

Damage control resuscitation (DCR) represents the natural evolution of the initial concept of damage control surgery. It currently includes early blood product transfusion, immediate arrest and/or temporization of ongoing hemorrhage (i.e., temporary intravascular shunts and/or balloon tamponade) as well as restoration of blood volume and physiologic/hematologic stability. As a result, DCR addresses the early coagulopathy of trauma, avoids massive crystalloid resuscitation and leaves the peritoneal cavity open when a patient approaches physiologic exhaustion without improvement. This concept also applies to severe injuries within anatomical transition zones as well as extremities. This review will discuss each of these concepts in detail. PMID:24461267

Optical Properties in Nonequilibrium Phase Transitions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ao, T.; Lee, E.; Tam, H.

An open question about the dynamical behavior of materials is how phase transition occurs in highly nonequilibrium systems. One important class of study is the excitation of a solid by an ultrafast, intense laser. The preferential heating of electrons by the laser field gives rise to initial states dominated by hot electrons in a cold lattice. Using a femtosecond laser pump-probe approach, we have followed the temporal evolution of the optical properties of such a system. The results show interesting correlation to nonthermal melting and lattice disordering processes. They also reveal a liquid-plasma transition when the lattice energy density reachesmore » a critical value.« less

Optical Properties in Non-equilibrium Phase Transitions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ao, T; Ping, Y; Widmann, K

An open question about the dynamical behavior of materials is how phase transition occurs in highly non-equilibrium systems. One important class of study is the excitation of a solid by an ultrafast, intense laser. The preferential heating of electrons by the laser field gives rise to initial states dominated by hot electrons in a cold lattice. Using a femtosecond laser pump-probe approach, we have followed the temporal evolution of the optical properties of such a system. The results show interesting correlation to non-thermal melting and lattice disordering processes. They also reveal a liquid-plasma transition when the lattice energy density reachesmore » a critical value.« less

Understanding spatial and temporal behavior of sea spray droplets in the marine atmospheric boundary layer using an Eulerian-Lagrangian model

NASA Astrophysics Data System (ADS)

Nissanka, I. D.; Richter, D. H.

2017-12-01

Previous studies have shown that sea spray droplets can play a significant role in air-sea heat and moisture exchange. The larger spray droplets have potential to transfer considerable amount of mass, momentum and heat, however they remain closer to surface and their residence times are shorter due to the faster settling. On the other hand, smaller droplets have high vertical mobility which allows sufficient time for droplets to adjust to ambient conditions. Hence, to study the heat and moisture characteristics of sea spray droplets it is important to understand how different droplet sizes behave in the Marine Atmospheric Boundary Layer (MABL), especially their temporal evolutions. In this study sea spray droplet transport in the MABL is simulated using Large Eddy Simulation combined with a Lagrangian Particle model which represents spray droplets of varying size. The individual droplets are tracked while their radius and temperature evolve based on local ambient conditions. The particles are advected based on the local resolved velocities and the particle dispersion due to sub-filtered scale motions are modeled using a Lagrangian stochastic model. In this study a series of simulations are conducted with the focus of understanding fundamental droplet microphysics, which will help characterize and quantify the lifetime and airborne concentrations of spray droplets in the MABL, thus elucidating ongoing knowledge gaps which are impossible to fill using observations alone. We measure the size resolved spray droplet vertical concentrations, particle residence times, and temporal evolution of droplet radius and temperature to explain the behavior of sea spry droplets in MABL. The PDF of residence time of different initial droplet sizes and joint PDFs of droplet life time and radius and temperature for different droplet sizes are calculated to further quantify the temporal and spatial behavior of sea spray droplets in the MABL, which can be used as inputs into bulk models of air-sea transfer.

Influence of Game Evolution and the Phase of Competition on Temporal Game Structure in High-Level Table Tennis Tournaments.

PubMed

Leite, Jorge Vieira de Mello; Barbieri, Fabio Augusto; Miyagi, Willian; Malta, Elvis de Souza; Zagatto, Alessandro Moura

2017-01-01

The aims of this study were: a) to investigate the game temporal structure in high-level table tennis competitions; b) to verify the influence of game evolution in international competitions from 2009 to 2012 (World Table Tennis Championships and the Olympic Games) on game temporal structure; c) to compare game temporal structure according to the phase of competition. Comparisons between the three international tournaments demonstrated that rally duration decreased significantly (p < 0.05) during the analyzed period (2009-2012), while the rest time increased (p < 0.05) from 2009 to 2011, but decreased (p < 0.05) from 2011 to 2012. In the competition phase analysis, it was found that rally duration decreased (p < 0.05) in the quarterfinals in relation to the semifinals and finals, while the rest time increased (p < 0.05) from the quarterfinals to semifinals and finals. Based on our findings and previous literature, we concluded that the performance level, game evolution and the competition phase influenced the game temporal structure of table tennis, considering longer rest periods adopted by elite athletes in relation to non-elite athletes, the reduction in rally duration and an increase in rest time over the 2009-2012 period and through the competition phases (quarterfinals to finals).

The meanings of recovery from addiction: evolution and promises.

PubMed

El-Guebaly, Nady

2012-03-01

To review the evolution of the paradigm of recovery in addiction and its implications. A systematic literature review was conducted using the MEDLINE and PsychInfo databases over the past 10 years and key references from the retrieved literature. The historical evolution of the concept of recovery has been shaped by several driving forces, including consumer experience, the need to better define our treatment outcome and parallel elaboration of the concepts of health, quality of life, and chronic disorders. Similarities and differences with the concept of "recovery" in mental health and other biomedical fields are identified.The empirical basis is growing in support of various proposed attributions and features of recovery along with the temporal benchmarks involved. The various forms of recovery, such as "natural," "transformational," or "medication-assisted," describe a choice of pathways to a common goal.The management implications are far-reaching and call for system shifts from acute stabilization to sustained recovery, including the growth of alternative institutions, and roles complementary to mutual help. Tools for the sustenance of recovery, including educational kits, recovery workbooks, and e-recovery initiatives, are developing. Although first-person accounts of recovery abound, a more systematic empirical investigation of the concept has just begun, including demographic and cultural differences. Management implications are derived from the experience with other "mainstream" chronic disorders with treatment providing stabilization and initiation of recovery and a range of long-term resources becoming available to sustain it.

Spatio-Temporal Progression of Cortical Activity Related to Continuous Overt and Covert Speech Production in a Reading Task.

PubMed

Brumberg, Jonathan S; Krusienski, Dean J; Chakrabarti, Shreya; Gunduz, Aysegul; Brunner, Peter; Ritaccio, Anthony L; Schalk, Gerwin

2016-01-01

How the human brain plans, executes, and monitors continuous and fluent speech has remained largely elusive. For example, previous research has defined the cortical locations most important for different aspects of speech function, but has not yet yielded a definition of the temporal progression of involvement of those locations as speech progresses either overtly or covertly. In this paper, we uncovered the spatio-temporal evolution of neuronal population-level activity related to continuous overt speech, and identified those locations that shared activity characteristics across overt and covert speech. Specifically, we asked subjects to repeat continuous sentences aloud or silently while we recorded electrical signals directly from the surface of the brain (electrocorticography (ECoG)). We then determined the relationship between cortical activity and speech output across different areas of cortex and at sub-second timescales. The results highlight a spatio-temporal progression of cortical involvement in the continuous speech process that initiates utterances in frontal-motor areas and ends with the monitoring of auditory feedback in superior temporal gyrus. Direct comparison of cortical activity related to overt versus covert conditions revealed a common network of brain regions involved in speech that may implement orthographic and phonological processing. Our results provide one of the first characterizations of the spatiotemporal electrophysiological representations of the continuous speech process, and also highlight the common neural substrate of overt and covert speech. These results thereby contribute to a refined understanding of speech functions in the human brain.

Spatio-Temporal Progression of Cortical Activity Related to Continuous Overt and Covert Speech Production in a Reading Task

PubMed Central

Brumberg, Jonathan S.; Krusienski, Dean J.; Chakrabarti, Shreya; Gunduz, Aysegul; Brunner, Peter; Ritaccio, Anthony L.; Schalk, Gerwin

2016-01-01

How the human brain plans, executes, and monitors continuous and fluent speech has remained largely elusive. For example, previous research has defined the cortical locations most important for different aspects of speech function, but has not yet yielded a definition of the temporal progression of involvement of those locations as speech progresses either overtly or covertly. In this paper, we uncovered the spatio-temporal evolution of neuronal population-level activity related to continuous overt speech, and identified those locations that shared activity characteristics across overt and covert speech. Specifically, we asked subjects to repeat continuous sentences aloud or silently while we recorded electrical signals directly from the surface of the brain (electrocorticography (ECoG)). We then determined the relationship between cortical activity and speech output across different areas of cortex and at sub-second timescales. The results highlight a spatio-temporal progression of cortical involvement in the continuous speech process that initiates utterances in frontal-motor areas and ends with the monitoring of auditory feedback in superior temporal gyrus. Direct comparison of cortical activity related to overt versus covert conditions revealed a common network of brain regions involved in speech that may implement orthographic and phonological processing. Our results provide one of the first characterizations of the spatiotemporal electrophysiological representations of the continuous speech process, and also highlight the common neural substrate of overt and covert speech. These results thereby contribute to a refined understanding of speech functions in the human brain. PMID:27875590

Temporal Experiment for Storms and Tropical Systems Technology Demonstration (TEMPEST-D): Risk Reduction for 6U-Class Nanosatellite Constellations

NASA Astrophysics Data System (ADS)

Reising, Steven C.; Gaier, Todd C.; Kummerow, Christian D.; Padmanabhan, Sharmila; Lim, Boon H.; Brown, Shannon T.; Heneghan, Cate; Chandra, Chandrasekar V.; Olson, Jon; Berg, Wesley

2016-04-01

TEMPEST-D will reduce the risk, cost and development time of a future constellation of 6U-Class nanosatellites to directly observe the time evolution of clouds and study the conditions that control the transition from non-precipitating to precipitating clouds using high-temporal resolution observations. TEMPEST-D provides passive millimeter-wave observations using a compact instrument that fits well within the size, weight and power (SWaP) requirements of the 6U-Class satellite architecture. TEMPEST-D is suitable for launch through NASA's CubeSat Launch Initiative (CSLI), for which it was selected in February 2015. By measuring the temporal evolution of clouds from the moment of the onset of precipitation, a TEMPEST constellation mission would improve our understanding of cloud processes and help to constrain one of the largest sources of uncertainty in climate models. Knowledge of clouds, cloud processes and precipitation is essential to our understanding of climate change. Uncertainties in the representation of key processes that govern the formation and dissipation of clouds and, in turn, control the global water and energy budgets lead to substantially different predictions of future climate in current models. TEMPEST millimeter-wave radiometers with five frequencies from 89 GHz to 182 GHz penetrate into the cloud to observe key changes as precipitation begins or ice accumulates inside the storm. The evolution of ice formation in clouds is important for climate prediction and a key factor in Earth's radiation budget. TEMPEST is designed to provide critical information on the time evolution of cloud and precipitation, yielding a first-order understanding of assumptions and uncertainties in current cloud parameterizations in general circulation models in diverse climate regimes. For a potential future one-year operational mission, five identical 6U-Class satellites would be deployed in the same orbital plane with 5- to 10-minute spacing deployed in an orbit similar to the International Space Station resupply missions, i.e. at ~400 km altitude and ~51° inclination. A one-year mission would capture 3 million observations of precipitation greater than 1 mm/hour rain rate, including at least 100,000 deep convective events. Passive drag-adjusting maneuvers would separate the five CubeSats in the same orbital plane by 5-10 minutes each, similar to deployment techniques to be used by NASA's Cyclone Global Navigation Satellite Systems (CYGNSS) mission.

Advancing Nucleosynthesis in Core-Collapse Supernovae Models Using 2D CHIMERA Simulations

NASA Astrophysics Data System (ADS)

Harris, J. A.; Hix, W. R.; Chertkow, M. A.; Bruenn, S. W.; Lentz, E. J.; Messer, O. B.; Mezzacappa, A.; Blondin, J. M.; Marronetti, P.; Yakunin, K.

2014-01-01

The deaths of massive stars as core-collapse supernovae (CCSN) serve as a crucial link in understanding galactic chemical evolution since the birth of the universe via the Big Bang. We investigate CCSN in polar axisymmetric simulations using the multidimensional radiation hydrodynamics code CHIMERA. Computational costs have traditionally constrained the evolution of the nuclear composition in CCSN models to, at best, a 14-species α-network. However, the limited capacity of the α-network to accurately evolve detailed composition, the neutronization and the nuclear energy generation rate has fettered the ability of prior CCSN simulations to accurately reproduce the chemical abundances and energy distributions as known from observations. These deficits can be partially ameliorated by "post-processing" with a more realistic network. Lagrangian tracer particles placed throughout the star record the temporal evolution of the initial simulation and enable the extension of the nuclear network evolution by incorporating larger systems in post-processing nucleosynthesis calculations. We present post-processing results of the four ab initio axisymmetric CCSN 2D models of Bruenn et al. (2013) evolved with the smaller α-network, and initiated from stellar metallicity, non-rotating progenitors of mass 12, 15, 20, and 25 M⊙ from Woosley & Heger (2007). As a test of the limitations of post-processing, we provide preliminary results from an ongoing simulation of the 15 M⊙ model evolved with a realistic 150 species nuclear reaction network in situ. With more accurate energy generation rates and an improved determination of the thermodynamic trajectories of the tracer particles, we can better unravel the complicated multidimensional "mass-cut" in CCSN simulations and probe for less energetically significant nuclear processes like the νp-process and the r-process, which require still larger networks.

Visualizing Clonal Evolution in Cancer.

PubMed

Krzywinski, Martin

2016-06-02

Rapid and inexpensive single-cell sequencing is driving new visualizations of cancer instability and evolution. Krzywinski discusses how to present clone evolution plots in order to visualize temporal, phylogenetic, and spatial aspects of a tumor in a single static image. Copyright © 2016 Elsevier Inc. All rights reserved.

Spatio-Temporal Evolution of Sound Speed Channels on the Chukchi Shelf

NASA Astrophysics Data System (ADS)

Eickmeier, J.; Badiey, M.; Wan, L.

2017-12-01

The physics of an acoustic waveguide are influenced by various boundary conditions as well as spatial and temporal fluctuations in temperature and salinity profiles the water column. The shallow water Canadian Basin Acoustic Propagation Experiment (CANAPE) experiment was designed to study the effect of oceanographic variability on the acoustic field. A pilot study was conducted in the summer of 2015, full deployment of acoustic and environmental moorings took place in 2016, and recovery will occur in late 2017. An example of strong oceanographic variability in the SW region is depicted in Figure 1. Over the course of 7 days, warm Bering Sea water arrived on the Chukchi Shelf and sank in the water column to between 25 m and 125 m depth. This warm water spread to a range of 10 km and a potential eddy of warm water formed causing an increase in sound speed between 15 km and 20 km range in Fig. 1(b). Due to the increased sound speed, a strong sound channel evolved between 100 m and 200 m for acoustic waves arriving from off the shelf, deep water sources. In Fig. 1(a), the initial formation of the acoustic channel is only evident in 50 m to 100 m of water out to a range of 5 km. Recorded environmental data will be used to study fluctuations in sound speed channel formation on the Chukchi Shelf. Data collected in 2015 and 2016 have shown sound duct evolution over 7 days and over a one-month period. Analysis is projected to show sound channel formation over a new range of spatio-temporal scales. This analysis will show a cycle of sound channels opening and closing on the shelf, where this cycle strongly influences the propagation path, range and attenuation of acoustic waves.

Geochemical evidence of mantle reservoir evolution during progressive rifting along the western Afar margin

NASA Astrophysics Data System (ADS)

Rooney, Tyrone O.; Mohr, Paul; Dosso, Laure; Hall, Chris

2013-02-01

The Afar triple junction, where the Red Sea, Gulf of Aden and African Rift System extension zones converge, is a pivotal domain for the study of continental-to-oceanic rift evolution. The western margin of Afar forms the southernmost sector of the western margin of the Red Sea rift where that margin enters the Ethiopian flood basalt province. Tectonism and volcanism at the triple junction had commenced by ˜31 Ma with crustal fissuring, diking and voluminous eruption of the Ethiopian-Yemen flood basalt pile. The dikes which fed the Oligocene-Quaternary lava sequence covering the western Afar rift margin provide an opportunity to probe the geochemical reservoirs associated with the evolution of a still active continental margin. 40Ar/39Ar geochronology reveals that the western Afar margin dikes span the entire history of rift evolution from the initial Oligocene flood basalt event to the development of focused zones of intrusion in rift marginal basins. Major element, trace element and isotopic (Sr-Nd-Pb-Hf) data demonstrate temporal geochemical heterogeneities resulting from variable contributions from the Afar plume, depleted asthenospheric mantle, and African lithosphere. The various dikes erupted between 31 Ma and 22 Ma all share isotopic signatures attesting to a contribution from the Afar plume, indicating this initial period in the evolution of the Afar margin was one of magma-assisted weakening of the lithosphere. From 22 Ma to 12 Ma, however, diffuse diking during continued evolution of the rift margin facilitated ascent of magmas in which depleted mantle and lithospheric sources predominated, though contributions from the Afar plume persisted. After 10 Ma, magmatic intrusion migrated eastwards towards the Afar rift floor, with an increasing fraction of the magmas derived from depleted mantle with less of a lithospheric signature. The dikes of the western Afar margin reveal that magma generation processes during the evolution of this continental rift margin are increasingly dominated by shallow decompressional melting of the ambient asthenosphere, the composition of which may in part be controlled by preferential channeling of plume material along the developing neo-oceanic axes of extension.

The temporal evolution of explosive events and its implication on reconnection dynamics

NASA Astrophysics Data System (ADS)

Guo, L.; Liu, W.; De Pontieu, B.; Huang, Y. M.; Peter, H.; Bhattacharjee, A.

2017-12-01

Transition-region explosive events and other bursts seen in extreme UV light are characterized by broad spectral line profiles, and the more violent ones show a strong enhancement of emission. They are thought to be driven by magnetic reconnection, because of their characteristic spectral profiles often indicating strong Alfvénic flows, and because of the fact that they typically occur where magnetic flux concentrations of opposite polarity intersect. In this presentation, we will focus on the temporal evolution of transition-region explosive events. In particular, we will investigate fast onsets of these events and the rapid oscillations of intensity during these event. The fast onset refers to the beginning of an explosive event, where the intensities and the widths of its line profiles increase dramatically (often within less than 10 seconds) and the rapid oscillations of intensity refer to blinks of emission that usually last less than 10 seconds during the event. In order to interpret and understand underlying mechanisms of these observations, we conduct numerical simulation of an explosive event and calculate its spectra. We observe a similar temporal evolution in the synthetic Si IV spectra when the explosive event is driven by time-dependent reconnection—plasmoid instability. The qualitative agreement between observations and simulations suggests that the temporal evolution of Si IV spectra of explosive events are closely related to reconnection dynamics.

Modeling the temporal variability of zinc concentrations in zinc roof runoff-experimental study and uncertainty analysis.

PubMed

Sage, Jérémie; El Oreibi, Elissar; Saad, Mohamed; Gromaire, Marie-Christine

2016-08-01

This study investigates the temporal variability of zinc concentrations from zinc roof runoff. The influence of rainfall characteristics and dry period duration is evaluated by combining laboratory experiment on small zinc sheets and in situ measurements under real weather conditions from a 1.6-m(2) zinc panel. A reformulation of a commonly used conceptual runoff quality model is introduced and its ability to simulate the evolution of zinc concentrations is evaluated. A systematic and sharp decrease from initially high to relatively low and stable zinc concentrations after 0.5 to 2 mm of rainfall is observed for both experiments, suggesting that highly soluble corrosion products are removed at early stages of runoff. A moderate dependence between antecedent dry period duration and the magnitude of zinc concentrations at the beginning of a rain event is evidenced. Contrariwise, results indicate that concentrations are not significantly influenced by rainfall intensities. Simulated rainfall experiment nonetheless suggests that a slight effect of rainfall intensities may be expected after the initial decrease of concentrations. Finally, this study shows that relatively simple conceptual runoff quality models may be adopted to simulate the variability of zinc concentrations during a rain event and from a rain event to another.

Imaging shock waves in diamond with both high temporal and spatial resolution at an XFEL

DOE PAGES

Schropp, Andreas; Hoppe, Robert; Meier, Vivienne; ...

2015-06-18

The advent of hard x-ray free-electron lasers (XFELs) has opened up a variety of scientific opportunities in areas as diverse as atomic physics, plasma physics, nonlinear optics in the x-ray range, and protein crystallography. In this article, we access a new field of science by measuring quantitatively the local bulk properties and dynamics of matter under extreme conditions, in this case by using the short XFEL pulse to image an elastic compression wave in diamond. The elastic wave was initiated by an intense optical laser pulse and was imaged at different delay times after the optical pump pulse using magnifiedmore » x-ray phase-contrast imaging. The temporal evolution of the shock wave can be monitored, yielding detailed information on shock dynamics, such as the shock velocity, the shock front width, and the local compression of the material. The method provides a quantitative perspective on the state of matter in extreme conditions.« less

Imaging Shock Waves in Diamond with Both High Temporal and Spatial Resolution at an XFEL.

PubMed

Schropp, Andreas; Hoppe, Robert; Meier, Vivienne; Patommel, Jens; Seiboth, Frank; Ping, Yuan; Hicks, Damien G; Beckwith, Martha A; Collins, Gilbert W; Higginbotham, Andrew; Wark, Justin S; Lee, Hae Ja; Nagler, Bob; Galtier, Eric C; Arnold, Brice; Zastrau, Ulf; Hastings, Jerome B; Schroer, Christian G

2015-06-18

The advent of hard x-ray free-electron lasers (XFELs) has opened up a variety of scientific opportunities in areas as diverse as atomic physics, plasma physics, nonlinear optics in the x-ray range, and protein crystallography. In this article, we access a new field of science by measuring quantitatively the local bulk properties and dynamics of matter under extreme conditions, in this case by using the short XFEL pulse to image an elastic compression wave in diamond. The elastic wave was initiated by an intense optical laser pulse and was imaged at different delay times after the optical pump pulse using magnified x-ray phase-contrast imaging. The temporal evolution of the shock wave can be monitored, yielding detailed information on shock dynamics, such as the shock velocity, the shock front width, and the local compression of the material. The method provides a quantitative perspective on the state of matter in extreme conditions.

Time-Hierarchical Clustering and Visualization of Weather Forecast Ensembles.

PubMed

Ferstl, Florian; Kanzler, Mathias; Rautenhaus, Marc; Westermann, Rudiger

2017-01-01

We propose a new approach for analyzing the temporal growth of the uncertainty in ensembles of weather forecasts which are started from perturbed but similar initial conditions. As an alternative to traditional approaches in meteorology, which use juxtaposition and animation of spaghetti plots of iso-contours, we make use of contour clustering and provide means to encode forecast dynamics and spread in one single visualization. Based on a given ensemble clustering in a specified time window, we merge clusters in time-reversed order to indicate when and where forecast trajectories start to diverge. We present and compare different visualizations of the resulting time-hierarchical grouping, including space-time surfaces built by connecting cluster representatives over time, and stacked contour variability plots. We demonstrate the effectiveness of our visual encodings with forecast examples of the European Centre for Medium-Range Weather Forecasts, which convey the evolution of specific features in the data as well as the temporally increasing spatial variability.

Experimental and theoretical investigation of radiation and dynamics properties in laser-produced carbon plasmas

NASA Astrophysics Data System (ADS)

Min, Qi; Su, Maogen; Wang, Bo; Cao, Shiquan; Sun, Duixiong; Dong, Chenzhong

2018-05-01

The radiation and dynamics properties of laser-produced carbon plasma in vacuum were studied experimentally with aid of a spatio-temporally resolved emission spectroscopy technique. In addition, a radiation hydrodynamics model based on the fluid dynamic equations and the radiative transfer equation was presented, and calculation of the charge states was performed within the time-dependent collisional radiative model. Detailed temporal and spatial evolution behavior about plasma parameters have been analyzed, such as velocity, electron temperature, charge state distribution, energy level population, and various atomic processes. At the same time, the effects of different atomic processes on the charge state distribution were examined. Finally, the validity of assuming a local thermodynamic equilibrium in the carbon plasma expansion was checked, and the results clearly indicate that the assumption was valid only at the initial (<80 ns) stage of plasma expansion. At longer delay times, it was not applicable near the plasma boundary because of a sharp drop of plasma temperature and electron density.

Extreme Threshold Failures Within a Heterogeneous Elastic Thin Sheet and the Spatial-Temporal Development of Induced Seismicity Within the Groningen Gas Field

NASA Astrophysics Data System (ADS)

Bourne, S. J.; Oates, S. J.

2017-12-01

Measurements of the strains and earthquakes induced by fluid extraction from a subsurface reservoir reveal a transient, exponential-like increase in seismicity relative to the volume of fluids extracted. If the frictional strength of these reactivating faults is heterogeneously and randomly distributed, then progressive failures of the weakest fault patches account in a general manner for this initial exponential-like trend. Allowing for the observable elastic and geometric heterogeneity of the reservoir, the spatiotemporal evolution of induced seismicity over 5 years is predictable without significant bias using a statistical physics model of poroelastic reservoir deformations inducing extreme threshold frictional failures of previously inactive faults. This model is used to forecast the temporal and spatial probability density of earthquakes within the Groningen natural gas reservoir, conditional on future gas production plans. Probabilistic seismic hazard and risk assessments based on these forecasts inform the current gas production policy and building strengthening plans.

A kinematic model for the development of the Afar Depression and its paleogeographic implications

NASA Astrophysics Data System (ADS)

Redfield, T. F.; Wheeler, W. H.; Often, M.

2003-11-01

The Afar Depression is a highly extended region of continental to transitional oceanic crust lying at the junction of the Red Sea, the Gulf of Aden and the Ethiopian rifts. We analyze the evolution of the Afar crust using plate kinematics and published crustal models to constrain the temporal and volumetric evolution of the rift basin. Our reconstruction constrains the regional-scale initial 3D geometry and subsequent extension and is well calibrated at the onset of rifting (˜20 Ma) and from the time of earliest documented sea-floor spreading anomalies (˜6 Ma Red Sea; ˜10 Ma Gulf of Aden). It also suggests the Danakil block is a highly extended body, having undergone between ˜200% and ˜400% stretch. Syn-rift sedimentary and magmatic additions to the crust are taken from the literature. Our analysis reveals a discrepancy: either the base of the crust has not been properly imaged, or a (plume-related?) process has somehow caused bulk removal of crustal material since extension began. Inferring subsidence history from thermal modeling and flexural considerations, we conclude subsidence in Afar was virtually complete by Mid Pliocene time. Our analysis contradicts interpretations of late (post 3 Ma) large (˜2 km) subsidence of the Hadar area near the Ethiopian Plateau, suggesting paleoclimatic data record regional, not local, climate change. Tectonic reconstruction (supported by paleontologic and isotopic data) suggests that a land bridge connected Africa and Arabia, via Danakil, up to the Early to Middle Pliocene. The temporal constraints on land bridge and escarpment morphology constrain Afar paleogeography, climate, and faunal migration routes. These constraints (particularly the development of geographic isolation) are fundamentally important for models evaluating and interpreting biologic evolution in the Afar, including speciation and human origins.

Spatial pattern of reference evapotranspiration change and its temporal evolution over Southwest China

NASA Astrophysics Data System (ADS)

Sun, Shanlei; Wang, Guojie; Huang, Jin; Mu, Mengyuan; Yan, Guixia; Liu, Chunwei; Gao, Chujie; Li, Xing; Yin, Yixing; Zhang, Fangmin; Zhu, Siguang; Hua, Wenjian

2017-11-01

Due to the close relationship of climate change with reference evapotranspiration (ETo), detecting changes in ETo spatial distribution and its temporal evolution at local and regional levels is favorable to comprehensively understand climate change-induced impacts on hydrology and agriculture. In this study, the objective is to identify whether climate change has caused variation of ETo spatial distribution in different analysis periods [i.e., long- (20-year), medium- (10-year), and short-term (5-year)] and to investigate its temporal evolution (namely, when these changes happened) at annual and monthly scales in Southwest China (SWC). First, we estimated ETo values using the United Nations Food and Agriculture Organization (FAO) Penman-Monteith equation, based on historical climate data measured at 269 weather sites during 1973-2012. The analysis of variance (ANOVA) results indicated that the spatial pattern of annual ETo had significantly changed during the past 40 years, particularly in west SWC for the long-term analysis period, and west and southeast SWC in both medium- and short-term periods, which corresponded to the percent area of significant differences which were 21.9, 58.0, and 48.2 %, respectively. For investigating temporal evolution of spatial patterns of annual ETo, Duncan's multiple range test was used, and we found that the most significant changes appeared during 1988-2002 with the significant area of higher than 25.0 %. In addition, for long-, medium-, and short-term analysis periods, the spatial distribution has significantly changed during March, September, November, and December, especially in the corresponding periods of 1988-1997, 1983-1992, 1973-1977, and 1988-2002. All in all, climate change has resulted in significant ETo changes in SWC since the 1970s. Knowledge of climate change-induced spatial distribution of ETo and its temporal evolution would aid in formulating strategies for water resources and agricultural managements.

Initial results of stimulated radiation measurements during the HAARP campaign of September 2017

NASA Astrophysics Data System (ADS)

Yellu, A. D.; Scales, W. A.; Mahmoudian, A.; Siefring, C.; Bernhardt, P.

2018-02-01

Initial results of stimulated electromagnetic radiation observed during an ionosphere heating experiment conducted at the High-Frequency Active Auroral Program (HAARP) facility are reported. The frequency of the pump wave used in the heating is in the neighborhood of the third harmonic of the electron cyclotron frequency, and of interest are simulated electromagnetic emissions (SEEs) within ? kHz of the heating frequency known as narrowband SEE (NSEE) and the commonly known wideband SEE (WSEE) which occur within ? kHz of the pump wave frequency. With the transmit power maintained at maximum, and all other conditions of the experiment invariable, the characteristics of NSEE and WSEE as time progresses from the time the transmitter is switched on are detailed in the results. The dependence of the characteristics of the NSEE and WSEE with temporal evolution into the heating cycle are observed to be fundamentally different.

Exoplanetary System HD 189733 - Chromosphere, Transit, Activity

NASA Astrophysics Data System (ADS)

Krejcova, T.; Czesla, S.; Wolter, U.; Schmitt, J. H. M. M.

2015-01-01

We present a study of the temporal evolution of the chromospherically sensitive lines in the transiting exoplanetary system HD 189733 using high-resolution UVES spectra. With its fast temporal cadence of only 45 s and its wide spectral coverage, our time series is ideal to study the influence of the transiting planetary disk on chromospheric lines . We measured the equivalent width and central line depression of the Ca II H and K lines, Hα, and the Ca II infrared triplet. While all these lines show temporal evolution on a scale potentially induced by the occulting planetary disk, strong intrinsic stellar variability prevents us from uniquely ascribing the observed variation to the planetary transit.

Temporally resolved diagnosis of an atmospheric-pressure pulse-modulated argon surface wave plasma by optical emission spectroscopy

NASA Astrophysics Data System (ADS)

Chen, Chuan-Jie; Li, Shou-Zhe; Zhang, Jialiang; Liu, Dongping

2018-01-01

A pulse-modulated argon surface wave plasma generated at atmospheric pressure is characterized by means of temporally resolved optical emission spectroscopy (OES). The temporal evolution of the gas temperature, the electron temperature and density, the radiative species of atomic Ar, and the molecular band of OH(A) and N2(C) are investigated experimentally by altering the instantaneous power, pulse repetitive frequency, and duty ratio. We focused on the physical phenomena occurring at the onset of the time-on period and after the power interruption at the start of the time-off period. Meanwhile, the results are discussed qualitatively for an in-depth insight of its dynamic evolution.

Spatial-temporal characteristics of lightning flash size in a supercell storm

NASA Astrophysics Data System (ADS)

Zhang, Zhixiao; Zheng, Dong; Zhang, Yijun; Lu, Gaopeng

2017-11-01

The flash sizes of a supercell storm, in New Mexico on October 5, 2004, are studied using the observations from the New Mexico Lightning Mapping Array and the Albuquerque, New Mexico, Doppler radar (KABX). First, during the temporal evolution of the supercell, the mean flash size is anti-correlated with the flash rate, following a unary power function, with a correlation coefficient of - 0.87. In addition, the mean flash size is linearly correlated with the area of reflectivity > 30 dBZ at 5 km normalized by the flash rate, with a correlation coefficient of 0.88. Second, in the horizontal, flash size increases along the direction from the region near the convection zone to the adjacent forward anvil. The region of minimum flash size usually corresponds to the region of maximum flash initiation and extent density. The horizontal correspondence between the mean flash size and the flash extent density can also be fitted by a unary power function, and the correlation coefficient is > 0.5 in 50% of the radar volume scans. Furthermore, the quality of fit is positively correlated to the convective intensity. Third, in the vertical direction, the height of the maximum flash initiation density is close to the height of maximum flash extent density, but corresponds to the height where the mean flash size is relatively small. In the discussion, the distribution of the small and dense charge regions when and where convection is vigorous in the storm, is deduced to be responsible for the relationship that flash size is temporally and spatially anti-correlated with flash rate and density, and the convective intensity.

Self-organized criticality in forest-landscape evolution

Treesearch

J.C. Sprott; Janine Bolliger; David J. Mladenoff

2002-01-01

A simple cellular automaton replicates the fractal pattern of a natural forest landscape and predicts its evolution. Spatial distributions and temporal fluctuations in global quantities show power-law spectra, implying scale-invariance, characteristic of self-organized criticality. The evolution toward the SOC state and the robustness of that state to perturbations...

Fully coupled approach to modeling shallow water flow, sediment transport, and bed evolution in rivers

NASA Astrophysics Data System (ADS)

Li, Shuangcai; Duffy, Christopher J.

2011-03-01

Our ability to predict complex environmental fluid flow and transport hinges on accurate and efficient simulations of multiple physical phenomenon operating simultaneously over a wide range of spatial and temporal scales, including overbank floods, coastal storm surge events, drying and wetting bed conditions, and simultaneous bed form evolution. This research implements a fully coupled strategy for solving shallow water hydrodynamics, sediment transport, and morphological bed evolution in rivers and floodplains (PIHM_Hydro) and applies the model to field and laboratory experiments that cover a wide range of spatial and temporal scales. The model uses a standard upwind finite volume method and Roe's approximate Riemann solver for unstructured grids. A multidimensional linear reconstruction and slope limiter are implemented, achieving second-order spatial accuracy. Model efficiency and stability are treated using an explicit-implicit method for temporal discretization with operator splitting. Laboratory-and field-scale experiments were compiled where coupled processes across a range of scales were observed and where higher-order spatial and temporal accuracy might be needed for accurate and efficient solutions. These experiments demonstrate the ability of the fully coupled strategy in capturing dynamics of field-scale flood waves and small-scale drying-wetting processes.

Temporal evolution of crack propagation propensity in snow in relation to slab and weak layer properties

NASA Astrophysics Data System (ADS)

Schweizer, Jürg; Reuter, Benjamin; van Herwijnen, Alec; Richter, Bettina; Gaume, Johan

2016-11-01

If a weak snow layer below a cohesive slab is present in the snow cover, unstable snow conditions can prevail for days or even weeks. We monitored the temporal evolution of a weak layer of faceted crystals as well as the overlaying slab layers at the location of an automatic weather station in the Steintälli field site above Davos (Eastern Swiss Alps). We focussed on the crack propagation propensity and performed propagation saw tests (PSTs) on 7 sampling days during a 2-month period from early January to early March 2015. Based on video images taken during the tests we determined the mechanical properties of the slab and the weak layer and compared them to the results derived from concurrently performed measurements of penetration resistance using the snow micro-penetrometer (SMP). The critical cut length, observed in PSTs, increased overall during the measurement period. The increase was not steady and the lowest values of critical cut length were observed around the middle of the measurement period. The relevant mechanical properties, the slab effective elastic modulus and the weak layer specific fracture, overall increased as well. However, the changes with time differed, suggesting that the critical cut length cannot be assessed by simply monitoring a single mechanical property such as slab load, slab modulus or weak layer specific fracture energy. Instead, crack propagation propensity is the result of a complex interplay between the mechanical properties of the slab and the weak layer. We then compared our field observations to newly developed metrics of snow instability related to either failure initiation or crack propagation propensity. The metrics were either derived from the SMP signal or calculated from simulated snow stratigraphy (SNOWPACK). They partially reproduced the observed temporal evolution of critical cut length and instability test scores. Whereas our unique dataset of quantitative measures of snow instability provides new insights into the complex slab-weak layer interaction, it also showed some deficiencies of the modelled metrics of instability - calling for an improved representation of the mechanical properties.

Modeling of surface temperature effects on mixed material migration in NSTX-U

NASA Astrophysics Data System (ADS)

Nichols, J. H.; Jaworski, M. A.; Schmid, K.

2016-10-01

NSTX-U will initially operate with graphite walls, periodically coated with thin lithium films to improve plasma performance. However, the spatial and temporal evolution of these films during and after plasma exposure is poorly understood. The WallDYN global mixed-material surface evolution model has recently been applied to the NSTX-U geometry to simulate the evolution of poloidally inhomogenous mixed C/Li/O plasma-facing surfaces. The WallDYN model couples local erosion and deposition processes with plasma impurity transport in a non-iterative, self-consistent manner that maintains overall material balance. Temperature-dependent sputtering of lithium has been added to WallDYN, utilizing an adatom sputtering model developed from test stand experimental data. Additionally, a simplified temperature-dependent diffusion model has been added to WallDYN so as to capture the intercalation of lithium into a graphite bulk matrix. The sensitivity of global lithium migration patterns to changes in surface temperature magnitude and distribution will be examined. The effect of intra-discharge increases in surface temperature due to plasma heating, such as those observed during NSTX Liquid Lithium Divertor experiments, will also be examined. Work supported by US DOE contract DE-AC02-09CH11466.

A Proposed Neurological Interpretation of Language Evolution.

PubMed

Ardila, Alfredo

2015-01-01

Since the very beginning of the aphasia history it has been well established that there are two major aphasic syndromes (Wernicke's-type and Broca's-type aphasia); each one of them is related to the disturbance at a specific linguistic level (lexical/semantic and grammatical) and associated with a particular brain damage localization (temporal and frontal-subcortical). It is proposed that three stages in language evolution could be distinguished: (a) primitive communication systems similar to those observed in other animals, including nonhuman primates; (b) initial communication systems using sound combinations (lexicon) but without relationships among the elements (grammar); and (c) advanced communication systems including word-combinations (grammar). It is proposed that grammar probably originated from the internal representation of actions, resulting in the creation of verbs; this is an ability that depends on the so-called Broca's area and related brain networks. It is suggested that grammar is the basic ability for the development of so-called metacognitive executive functions. It is concluded that while the lexical/semantic language system (vocabulary) probably appeared during human evolution long before the contemporary man (Homo sapiens sapiens), the grammatical language historically represents a recent acquisition and is correlated with the development of complex cognition (metacognitive executive functions).

A Proposed Neurological Interpretation of Language Evolution

PubMed Central

2015-01-01

Since the very beginning of the aphasia history it has been well established that there are two major aphasic syndromes (Wernicke's-type and Broca's-type aphasia); each one of them is related to the disturbance at a specific linguistic level (lexical/semantic and grammatical) and associated with a particular brain damage localization (temporal and frontal-subcortical). It is proposed that three stages in language evolution could be distinguished: (a) primitive communication systems similar to those observed in other animals, including nonhuman primates; (b) initial communication systems using sound combinations (lexicon) but without relationships among the elements (grammar); and (c) advanced communication systems including word-combinations (grammar). It is proposed that grammar probably originated from the internal representation of actions, resulting in the creation of verbs; this is an ability that depends on the so-called Broca's area and related brain networks. It is suggested that grammar is the basic ability for the development of so-called metacognitive executive functions. It is concluded that while the lexical/semantic language system (vocabulary) probably appeared during human evolution long before the contemporary man (Homo sapiens sapiens), the grammatical language historically represents a recent acquisition and is correlated with the development of complex cognition (metacognitive executive functions). PMID:26124540

Speckle temporal stability in XAO coronagraphic images. II. Refine model for quasi-static speckle temporal evolution for VLT/SPHERE

NASA Astrophysics Data System (ADS)

Martinez, P.; Kasper, M.; Costille, A.; Sauvage, J. F.; Dohlen, K.; Puget, P.; Beuzit, J. L.

2013-06-01

Context. Observing sequences have shown that the major noise source limitation in high-contrast imaging is the presence of quasi-static speckles. The timescale on which quasi-static speckles evolve is determined by various factors, mechanical or thermal deformations, among others. Aims: Understanding these time-variable instrumental speckles and, especially, their interaction with other aberrations, referred to as the pinning effect, is paramount for the search for faint stellar companions. The temporal evolution of quasi-static speckles is, for instance, required for quantifying the gain expected when using angular differential imaging (ADI) and to determining the interval on which speckle nulling techniques must be carried out. Methods: Following an early analysis of a time series of adaptively corrected, coronagraphic images obtained in a laboratory condition with the high-order test bench (HOT) at ESO Headquarters, we confirm our results with new measurements carried out with the SPHERE instrument during its final test phase in Europe. The analysis of the residual speckle pattern in both direct and differential coronagraphic images enables the characterization of the temporal stability of quasi-static speckles. Data were obtained in a thermally actively controlled environment reproducing realistic conditions encountered at the telescope. Results: The temporal evolution of the quasi-static wavefront error exhibits a linear power law, which can be used to model quasi-static speckle evolution in the context of forthcoming high-contrast imaging instruments, with implications for instrumentation (design, observing strategies, data reduction). Such a model can be used for instance to derive the timescale on which non-common path aberrations must be sensed and corrected. We found in our data that quasi-static wavefront error increases with ~0.7 Å per minute.

Stochastic effects on phase-space holes and clumps in kinetic systems near marginal stability

DOE PAGES

Woods, Benjamin J. Q.; Duarte, Vinicius N.; De-Gol, Anthony J.; ...

2018-01-23

The creation and subsequent evolution of marginally-unstable modes have been observed in a wide range of fusion devices. This behaviour has been successfully explained, for a single frequency shifting mode, in terms of phase-space structures known as a 'hole' and 'clump'. Here in this paper, we introduce stochasticity into a 1D kinetic model, affecting the formation and evolution of resonant modes in the system. We find that noise in the fast particle distribution or electric field leads to a shift in the asymptotic behaviour of a chirping resonant mode; this noise heuristically maps onto radial microturbulence via canonical toroidal momentummore » scattering, affecting hole and clump formation. While the mechanism allowing for the formation of the hole and clump is coherent, the lifetime of a hole and clump is shown to be highly sensitive to initial conditions, affecting the temporal profile of a single bursting event in mode amplitude.« less

Stochastic effects on phase-space holes and clumps in kinetic systems near marginal stability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woods, Benjamin J. Q.; Duarte, Vinicius N.; De-Gol, Anthony J.

The creation and subsequent evolution of marginally-unstable modes have been observed in a wide range of fusion devices. This behaviour has been successfully explained, for a single frequency shifting mode, in terms of phase-space structures known as a 'hole' and 'clump'. Here in this paper, we introduce stochasticity into a 1D kinetic model, affecting the formation and evolution of resonant modes in the system. We find that noise in the fast particle distribution or electric field leads to a shift in the asymptotic behaviour of a chirping resonant mode; this noise heuristically maps onto radial microturbulence via canonical toroidal momentummore » scattering, affecting hole and clump formation. While the mechanism allowing for the formation of the hole and clump is coherent, the lifetime of a hole and clump is shown to be highly sensitive to initial conditions, affecting the temporal profile of a single bursting event in mode amplitude.« less

Experimental study on the formation of subaqueous barchan dunes in closed conduits

NASA Astrophysics Data System (ADS)

Alvarez, Carlos A.; Franklin, Erick

2018-06-01

The present paper reports the formation of subaqueous barchan dunes by analyzing the temporal evolution of their main geometrical characteristics (width W, length L and horn lengths Lh). After certain time, the dunes reach an equilibrium state and it is possible to study the relation between W versus L, and the dependence of the dune velocity on L. The barchan dunes were formed from spherical glass and zirconium beads. An initial conical heap of beads was placed on the bottom wall of a rectangular channel and it was entrained by a water turbulent flow. The evolution of the dunes was filmed with a CCD camera placed above the channel and mounted on a traveling system. Our results show that after a characteristic time the dune shape does not change and it travels with a roughly constant velocity. Once the equilibrium state is reach, W and L are measured, showing linear dependence. Furthermore, we show that the dune velocity Vd scales with the inverse of the dune length.

Solar Flare Impulsive Phase Observations from SDO and Other Observatories

NASA Technical Reports Server (NTRS)

Chamberlin, Phillip C.; Woods, Thomas N.; Schrijver, Karel; Warren, Harry; Milligan, Ryan; Christe, Steven; Brosius, Jeffrey W.

2010-01-01

With the start of normal operations of the Solar Dynamics Observatory in May 2010, the Extreme ultraviolet Variability Experiment (EVE) and the Atmospheric Imaging Assembly (AIA) have been returning the most accurate solar XUV and EUV measurements every 10 and 12 seconds, respectively, at almost 100% duty cycle. The focus of the presentation will be the solar flare impulsive phase observations provided by EVE and AIA and what these observations can tell us about the evolution of the initial phase of solar flares. Also emphasized throughout is how simultaneous observations with other instruments, such as RHESSI, SOHO-CDS, and HINODE-EIS, will help provide a more complete characterization of the solar flares and the evolution and energetics during the impulsive phase. These co-temporal observations from the other solar instruments can provide information such as extending the high temperature range spectra and images beyond that provided by the EUV and XUV wavelengths, provide electron density input into the lower atmosphere at the footpoints, and provide plasma flows of chromospheric evaporation, among other characteristics.

Scaling in the aggregation dynamics of a magnetorheological fluid.

PubMed

Domínguez-García, P; Melle, Sonia; Pastor, J M; Rubio, M A

2007-11-01

We present experimental results on the aggregation dynamics of a magnetorheological fluid, namely, an aqueous suspension of micrometer-sized superparamagnetic particles, under the action of a constant uniaxial magnetic field using video microscopy and image analysis. We find a scaling behavior in several variables describing the aggregation kinetics. The data agree well with the Family-Vicsek scaling ansatz for diffusion-limited cluster-cluster aggregation. The kinetic exponents z and z' are obtained from the temporal evolution of the mean cluster size S(t) and the number of clusters N(t), respectively. The crossover exponent Delta is calculated in two ways: first, from the initial slope of the scaling function; second, from the evolution of the nonaggregated particles, n1(t). We report on results of Brownian two-dimensional dynamics simulations and compare the results with the experiments. Finally, we discuss the differences obtained between the kinetic exponents in terms of the variation in the crossover exponent and relate this behavior to the physical interpretation of the crossover exponent.

Comparing nonlinear MHD simulations of low-aspect-ratio RFPs to RELAX experiments

NASA Astrophysics Data System (ADS)

McCollam, K. J.; den Hartog, D. J.; Jacobson, C. M.; Sovinec, C. R.; Masamune, S.; Sanpei, A.

2016-10-01

Standard reversed-field pinch (RFP) plasmas provide a nonlinear dynamical system as a validation domain for numerical MHD simulation codes, with applications in general toroidal confinement scenarios including tokamaks. Using the NIMROD code, we simulate the nonlinear evolution of RFP plasmas similar to those in the RELAX experiment. The experiment's modest Lundquist numbers S (as low as a few times 104) make closely matching MHD simulations tractable given present computing resources. Its low aspect ratio ( 2) motivates a comparison study using cylindrical and toroidal geometries in NIMROD. We present initial results from nonlinear single-fluid runs at S =104 for both geometries and a range of equilibrium parameters, which preliminarily show that the magnetic fluctuations are roughly similar between the two geometries and between simulation and experiment, though there appear to be some qualitative differences in their temporal evolution. Runs at higher S are planned. This work is supported by the U.S. DOE and by the Japan Society for the Promotion of Science.

Temporal and Spatial Evolution Characteristics of Disturbance Wave in a Hypersonic Boundary Layer due to Single-Frequency Entropy Disturbance

PubMed Central

Lv, Hongqing; Shi, Jianqiang

2014-01-01

By using a high-order accurate finite difference scheme, direct numerical simulation of hypersonic flow over an 8° half-wedge-angle blunt wedge under freestream single-frequency entropy disturbance is conducted; the generation and the temporal and spatial nonlinear evolution of boundary layer disturbance waves are investigated. Results show that, under the freestream single-frequency entropy disturbance, the entropy state of boundary layer is changed sharply and the disturbance waves within a certain frequency range are induced in the boundary layer. Furthermore, the amplitudes of disturbance waves in the period phase are larger than that in the response phase and ablation phase and the frequency range in the boundary layer in the period phase is narrower than that in these two phases. In addition, the mode competition, dominant mode transformation, and disturbance energy transfer exist among different modes both in temporal and in spatial evolution. The mode competition changes the characteristics of nonlinear evolution of the unstable waves in the boundary layer. The development of the most unstable mode along streamwise relies more on the motivation of disturbance waves in the upstream than that of other modes on this motivation. PMID:25143983

Temporal and spatial evolution characteristics of disturbance wave in a hypersonic boundary layer due to single-frequency entropy disturbance.

PubMed

Wang, Zhenqing; Tang, Xiaojun; Lv, Hongqing; Shi, Jianqiang

2014-01-01

By using a high-order accurate finite difference scheme, direct numerical simulation of hypersonic flow over an 8° half-wedge-angle blunt wedge under freestream single-frequency entropy disturbance is conducted; the generation and the temporal and spatial nonlinear evolution of boundary layer disturbance waves are investigated. Results show that, under the freestream single-frequency entropy disturbance, the entropy state of boundary layer is changed sharply and the disturbance waves within a certain frequency range are induced in the boundary layer. Furthermore, the amplitudes of disturbance waves in the period phase are larger than that in the response phase and ablation phase and the frequency range in the boundary layer in the period phase is narrower than that in these two phases. In addition, the mode competition, dominant mode transformation, and disturbance energy transfer exist among different modes both in temporal and in spatial evolution. The mode competition changes the characteristics of nonlinear evolution of the unstable waves in the boundary layer. The development of the most unstable mode along streamwise relies more on the motivation of disturbance waves in the upstream than that of other modes on this motivation.

Manifold angles, the concept of self-similarity, and angle-enhanced bifurcation diagrams

PubMed Central

Beims, Marcus W.; Gallas, Jason A. C.

2016-01-01

Chaos and regularity are routinely discriminated by using Lyapunov exponents distilled from the norm of orthogonalized Lyapunov vectors, propagated during the temporal evolution of the dynamics. Such exponents are mean-field-like averages that, for each degree of freedom, squeeze the whole temporal evolution complexity into just a single number. However, Lyapunov vectors also contain a step-by-step record of what exactly happens with the angles between stable and unstable manifolds during the whole evolution, a big-data information permanently erased by repeated orthogonalizations. Here, we study changes of angles between invariant subspaces as observed during temporal evolution of Hénon’s system. Such angles are calculated numerically and analytically and used to characterize self-similarity of a chaotic attractor. In addition, we show how standard tools of dynamical systems may be angle-enhanced by dressing them with informations not difficult to extract. Such angle-enhanced tools reveal unexpected and practical facts that are described in detail. For instance, we present a video showing an angle-enhanced bifurcation diagram that exposes from several perspectives the complex geometrical features underlying the attractors. We believe such findings to be generic for extended classes of systems. PMID:26732416

Manifold angles, the concept of self-similarity, and angle-enhanced bifurcation diagrams

NASA Astrophysics Data System (ADS)

Beims, Marcus W.; Gallas, Jason A. C.

2016-01-01

Chaos and regularity are routinely discriminated by using Lyapunov exponents distilled from the norm of orthogonalized Lyapunov vectors, propagated during the temporal evolution of the dynamics. Such exponents are mean-field-like averages that, for each degree of freedom, squeeze the whole temporal evolution complexity into just a single number. However, Lyapunov vectors also contain a step-by-step record of what exactly happens with the angles between stable and unstable manifolds during the whole evolution, a big-data information permanently erased by repeated orthogonalizations. Here, we study changes of angles between invariant subspaces as observed during temporal evolution of Hénon’s system. Such angles are calculated numerically and analytically and used to characterize self-similarity of a chaotic attractor. In addition, we show how standard tools of dynamical systems may be angle-enhanced by dressing them with informations not difficult to extract. Such angle-enhanced tools reveal unexpected and practical facts that are described in detail. For instance, we present a video showing an angle-enhanced bifurcation diagram that exposes from several perspectives the complex geometrical features underlying the attractors. We believe such findings to be generic for extended classes of systems.

Anomalous transport in disordered fracture networks: Spatial Markov model for dispersion with variable injection modes

NASA Astrophysics Data System (ADS)

Kang, Peter K.; Dentz, Marco; Le Borgne, Tanguy; Lee, Seunghak; Juanes, Ruben

2017-08-01

We investigate tracer transport on random discrete fracture networks that are characterized by the statistics of the fracture geometry and hydraulic conductivity. While it is well known that tracer transport through fractured media can be anomalous and particle injection modes can have major impact on dispersion, the incorporation of injection modes into effective transport modeling has remained an open issue. The fundamental reason behind this challenge is that-even if the Eulerian fluid velocity is steady-the Lagrangian velocity distribution experienced by tracer particles evolves with time from its initial distribution, which is dictated by the injection mode, to a stationary velocity distribution. We quantify this evolution by a Markov model for particle velocities that are equidistantly sampled along trajectories. This stochastic approach allows for the systematic incorporation of the initial velocity distribution and quantifies the interplay between velocity distribution and spatial and temporal correlation. The proposed spatial Markov model is characterized by the initial velocity distribution, which is determined by the particle injection mode, the stationary Lagrangian velocity distribution, which is derived from the Eulerian velocity distribution, and the spatial velocity correlation length, which is related to the characteristic fracture length. This effective model leads to a time-domain random walk for the evolution of particle positions and velocities, whose joint distribution follows a Boltzmann equation. Finally, we demonstrate that the proposed model can successfully predict anomalous transport through discrete fracture networks with different levels of heterogeneity and arbitrary tracer injection modes.

Real-time prediction of rain-triggered lahars: incorporating seasonality and catchment recovery

NASA Astrophysics Data System (ADS)

Jones, Robbie; Manville, Vern; Peakall, Jeff; Froude, Melanie J.; Odbert, Henry M.

2017-12-01

Rain-triggered lahars are a significant secondary hydrological and geomorphic hazard at volcanoes where unconsolidated pyroclastic material produced by explosive eruptions is exposed to intense rainfall, often occurring for years to decades after the initial eruptive activity. Previous studies have shown that secondary lahar initiation is a function of rainfall parameters, source material characteristics and time since eruptive activity. In this study, probabilistic rain-triggered lahar forecasting models are developed using the lahar occurrence and rainfall record of the Belham River valley at the Soufrière Hills volcano (SHV), Montserrat, collected between April 2010 and April 2012. In addition to the use of peak rainfall intensity (PRI) as a base forecasting parameter, considerations for the effects of rainfall seasonality and catchment evolution upon the initiation of rain-triggered lahars and the predictability of lahar generation are also incorporated into these models. Lahar probability increases with peak 1 h rainfall intensity throughout the 2-year dataset and is higher under given rainfall conditions in year 1 than year 2. The probability of lahars is also enhanced during the wet season, when large-scale synoptic weather systems (including tropical cyclones) are more common and antecedent rainfall and thus levels of deposit saturation are typically increased. The incorporation of antecedent conditions and catchment evolution into logistic-regression-based rain-triggered lahar probability estimation models is shown to enhance model performance and displays the potential for successful real-time prediction of lahars, even in areas featuring strongly seasonal climates and temporal catchment recovery.

From initiation to termination: a petrostratigraphic tour of the Ethiopian Low-Ti Flood Basalt Province

NASA Astrophysics Data System (ADS)

Krans, S. R.; Rooney, T. O.; Kappelman, J.; Yirgu, G.; Ayalew, D.

2018-05-01

Continental flood basalts (CFBs), thought to preserve the magmatic record of an impinging mantle plume head, offer spatial and temporal insights into melt generation processes in large igneous provinces (LIPs). Despite the utility of CFBs in probing mantle plume composition, these basalts typically erupt fractionated compositions, suggestive of significant residence time in the continental lithosphere. The location and duration of residence within the lithosphere provide additional insights into the flux of plume-related magmas. The NW Ethiopian plateau offers a well-preserved stratigraphic sequence from flood basalt initiation to termination, and is thus an important target for study of CFBs. This study examines modal observations within a stratigraphic framework and places these observations within the context of the magmatic evolution of the Ethiopian CFB province. Data demonstrate multiple pulses of magma recharge punctuated by brief shut-down events, with initial flows fed by magmas that experienced deeper fractionation (lower crust). Broad changes in modal mineralogy and flow cyclicity are consistent with fluctuating changes in magmatic flux through a complex plumbing system, indicating pulsed magma flux and an overall shallowing of the magmatic plumbing system over time. The composition of plagioclase megacrysts suggests a constant replenishing of new primitive magma recharging the shallow plumbing system during the main phase of volcanism, reaching an apex prior to flood basalt termination. The petrostratigraphic data sets presented in this paper provide new insight into the evolution of a magma plumbing system in a CFB province.

Optimized temporal pattern of brain stimulation designed by computational evolution

PubMed Central

Brocker, David T.; Swan, Brandon D.; So, Rosa Q.; Turner, Dennis A.; Gross, Robert E.; Grill, Warren M.

2017-01-01

Brain stimulation is a promising therapy for several neurological disorders, including Parkinson’s disease. Stimulation parameters are selected empirically and are limited to the frequency and intensity of stimulation. We used the temporal pattern of stimulation as a novel parameter of deep brain stimulation to ameliorate symptoms in a parkinsonian animal model and in humans with Parkinson’s disease. We used model-based computational evolution to optimize the stimulation pattern. The optimized pattern produced symptom relief comparable to that from standard high-frequency stimulation (a constant rate of 130 or 185 Hz) and outperformed frequency-matched standard stimulation in the parkinsonian rat and in patients. Both optimized and standard stimulation suppressed abnormal oscillatory activity in the basal ganglia of rats and humans. The results illustrate the utility of model-based computational evolution to design temporal pattern of stimulation to increase the efficiency of brain stimulation in Parkinson’s disease, thereby requiring substantially less energy than traditional brain stimulation. PMID:28053151

The Evolution of Phenotypic Switching in Subdivided Populations

PubMed Central

Carja, Oana; Liberman, Uri; Feldman, Marcus W.

2014-01-01

Stochastic switching is an example of phenotypic bet hedging, where offspring can express a phenotype different from that of their parents. Phenotypic switching is well documented in viruses, yeast, and bacteria and has been extensively studied when the selection pressures vary through time. However, there has been little work on the evolution of phenotypic switching under both spatially and temporally fluctuating selection pressures. Here we use a population genetic model to explore the interaction of temporal and spatial variation in determining the evolutionary dynamics of phenotypic switching. We find that the stable switching rate is mainly determined by the rate of environmental change and the migration rate. This stable rate is also a decreasing function of the recombination rate, although this is a weaker effect than those of either the period of environmental change or the migration rate. This study highlights the interplay of spatial and temporal environmental variability, offering new insights into how migration can influence the evolution of phenotypic switching rates, mutation rates, or other sources of phenotypic variation. PMID:24496012

Complex temporal topic evolution modelling using the Kullback-Leibler divergence and the Bhattacharyya distance.

PubMed

Andrei, Victor; Arandjelović, Ognjen

2016-12-01

The rapidly expanding corpus of medical research literature presents major challenges in the understanding of previous work, the extraction of maximum information from collected data, and the identification of promising research directions. We present a case for the use of advanced machine learning techniques as an aide in this task and introduce a novel methodology that is shown to be capable of extracting meaningful information from large longitudinal corpora and of tracking complex temporal changes within it. Our framework is based on (i) the discretization of time into epochs, (ii) epoch-wise topic discovery using a hierarchical Dirichlet process-based model, and (iii) a temporal similarity graph which allows for the modelling of complex topic changes. More specifically, this is the first work that discusses and distinguishes between two groups of particularly challenging topic evolution phenomena: topic splitting and speciation and topic convergence and merging, in addition to the more widely recognized emergence and disappearance and gradual evolution. The proposed framework is evaluated on a public medical literature corpus.

Adaptive social learning strategies in temporally and spatially varying environments : how temporal vs. spatial variation, number of cultural traits, and costs of learning influence the evolution of conformist-biased transmission, payoff-biased transmission, and individual learning.

PubMed

Nakahashi, Wataru; Wakano, Joe Yuichiro; Henrich, Joseph

2012-12-01

Long before the origins of agriculture human ancestors had expanded across the globe into an immense variety of environments, from Australian deserts to Siberian tundra. Survival in these environments did not principally depend on genetic adaptations, but instead on evolved learning strategies that permitted the assembly of locally adaptive behavioral repertoires. To develop hypotheses about these learning strategies, we have modeled the evolution of learning strategies to assess what conditions and constraints favor which kinds of strategies. To build on prior work, we focus on clarifying how spatial variability, temporal variability, and the number of cultural traits influence the evolution of four types of strategies: (1) individual learning, (2) unbiased social learning, (3) payoff-biased social learning, and (4) conformist transmission. Using a combination of analytic and simulation methods, we show that spatial-but not temporal-variation strongly favors the emergence of conformist transmission. This effect intensifies when migration rates are relatively high and individual learning is costly. We also show that increasing the number of cultural traits above two favors the evolution of conformist transmission, which suggests that the assumption of only two traits in many models has been conservative. We close by discussing how (1) spatial variability represents only one way of introducing the low-level, nonadaptive phenotypic trait variation that so favors conformist transmission, the other obvious way being learning errors, and (2) our findings apply to the evolution of conformist transmission in social interactions. Throughout we emphasize how our models generate empirical predictions suitable for laboratory testing.

Centrality measures in temporal networks with time series analysis

NASA Astrophysics Data System (ADS)

Huang, Qiangjuan; Zhao, Chengli; Zhang, Xue; Wang, Xiaojie; Yi, Dongyun

2017-05-01

The study of identifying important nodes in networks has a wide application in different fields. However, the current researches are mostly based on static or aggregated networks. Recently, the increasing attention to networks with time-varying structure promotes the study of node centrality in temporal networks. In this paper, we define a supra-evolution matrix to depict the temporal network structure. With using of the time series analysis, the relationships between different time layers can be learned automatically. Based on the special form of the supra-evolution matrix, the eigenvector centrality calculating problem is turned into the calculation of eigenvectors of several low-dimensional matrices through iteration, which effectively reduces the computational complexity. Experiments are carried out on two real-world temporal networks, Enron email communication network and DBLP co-authorship network, the results of which show that our method is more efficient at discovering the important nodes than the common aggregating method.

Evolution of optical force on two-level atom by ultrashort time-domain dark hollow Gaussian pulse

NASA Astrophysics Data System (ADS)

Cao, Xiaochao; Wang, Zhaoying; Lin, Qiang

2017-09-01

Based on the analytical expression of the ultrashort time-domain dark hollow Gaussian (TDHG) pulse, the optical force on two-level atoms induced by a TDHG pulse is calculated in this paper. The phenomena of focusing or defocusing of the light force is numerical analyzed for different detuning, various duration time, and different order of the ultrashort pulse. The transverse optical force can change from a focusing force to a defocusing force depending on the spatial-temporal coupling effect as the TDHG pulses propagating in free space. Our results also show that the initial phase of the TDHG pulse can significantly changes the envelope of the optical force.

Unsteady non-Newtonian hydrodynamics in granular gases.

PubMed

Astillero, Antonio; Santos, Andrés

2012-02-01

The temporal evolution of a dilute granular gas, both in a compressible flow (uniform longitudinal flow) and in an incompressible flow (uniform shear flow), is investigated by means of the direct simulation Monte Carlo method to solve the Boltzmann equation. Emphasis is laid on the identification of a first "kinetic" stage (where the physical properties are strongly dependent on the initial state) subsequently followed by an unsteady "hydrodynamic" stage (where the momentum fluxes are well-defined non-Newtonian functions of the rate of strain). The simulation data are seen to support this two-stage scenario. Furthermore, the rheological functions obtained from simulation are well described by an approximate analytical solution of a model kinetic equation. © 2012 American Physical Society

Applying spatio-temporal models to assess variations across health care areas and regions: Lessons from the decentralized Spanish National Health System.

PubMed

Librero, Julián; Ibañez, Berta; Martínez-Lizaga, Natalia; Peiró, Salvador; Bernal-Delgado, Enrique

2017-01-01

To illustrate the ability of hierarchical Bayesian spatio-temporal models in capturing different geo-temporal structures in order to explain hospital risk variations using three different conditions: Percutaneous Coronary Intervention (PCI), Colectomy in Colorectal Cancer (CCC) and Chronic Obstructive Pulmonary Disease (COPD). This is an observational population-based spatio-temporal study, from 2002 to 2013, with a two-level geographical structure, Autonomous Communities (AC) and Health Care Areas (HA). The Spanish National Health System, a quasi-federal structure with 17 regional governments (AC) with full responsibility in planning and financing, and 203 HA providing hospital and primary care to a defined population. A poisson-log normal mixed model in the Bayesian framework was fitted using the INLA efficient estimation procedure. The spatio-temporal hospitalization relative risks, the evolution of their variation, and the relative contribution (fraction of variation) of each of the model components (AC, HA, year and interaction AC-year). Following PCI-CCC-CODP order, the three conditions show differences in the initial hospitalization rates (from 4 to 21 per 10,000 person-years) and in their trends (upward, inverted V shape, downward). Most of the risk variation is captured by phenomena occurring at the HA level (fraction variance: 51.6, 54.7 and 56.9%). At AC level, the risk of PCI hospitalization follow a heterogeneous ascending dynamic (interaction AC-year: 17.7%), whereas in COPD the AC role is more homogenous and important (37%). In a system where the decisions loci are differentiated, the spatio-temporal modeling allows to assess the dynamic relative role of different levels of decision and their influence on health outcomes.

Two-dimensional simulation of clastic and carbonate sedimentation, consolidation, subsidence, fluid flow, heat flow and solute transport during the formation of sedimentary basins

NASA Astrophysics Data System (ADS)

Bitzer, Klaus

1999-05-01

Geological processes that create sedimentary basins or act during their formation can be simulated using the public domain computer code `BASIN'. For a given set of geological initial and boundary conditions the sedimentary basin evolution is calculated in a forward modeling approach. The basin is represented in a two-dimensional vertical cross section with individual layers. The stratigraphic, tectonic, hydrodynamic and thermal evolution is calculated beginning at an initial state, and subsequent changes of basin geometry are calculated from sedimentation rates, compaction and pore fluid mobilization, isostatic compensation, fault movement and subsidence. The sedimentologic, hydraulic and thermal parameters are stored at discrete time steps allowing the temporal evolution of the basin to be analyzed. A maximum flexibility in terms of geological conditions is achieved by using individual program modules representing geological processes which can be switched on and off depending on the data available for a specific simulation experiment. The code incorporates a module for clastic and carbonate sedimentation, taking into account the impact of clastic sediment supply on carbonate production. A maximum of four different sediment types, which may be mixed during sedimentation, can be defined. Compaction and fluid flow are coupled through the consolidation equation and the nonlinear form of the equation of state for porosity, allowing nonequilibrium compaction and overpressuring to be calculated. Instead of empirical porosity-effective stress equations, a physically consistent consolidation model is applied which incorporates a porosity dependent sediment compressibility. Transient solute transport and heat flow are calculated as well, applying calculated fluid flow rates from the hydraulic model. As a measure for hydrocarbon generation, the Time-Temperature Index (TTI) is calculated. Three postprocessing programs are available to provide graphic output in PostScript format: BASINVIEW is used to display the distribution of parameters in the simulated cross-section of the basin for defined time steps. It is used in conjunction with the Ghostview software, which is freeware and available on most computer systems. AIBASIN provides PostScript output for Adobe Illustrator®, taking advantage of the layer-concept which facilitates further graphic manipulation. BASELINE is used to display parameter distribution at a defined well or to visualize the temporal evolution of individual elements located in the simulated sedimentary basin. The modular structure of the BASIN code allows additional processes to be included. A module to simulate reactive transport and diagenetic reactions is planned for future versions. The program has been applied to existing sedimentary basins, and it has also shown a high potential for classroom instruction, giving the possibility to create hypothetical basins and to interpret basin evolution in terms of sequence stratigraphy or petroleum potential.

Intensified agriculture favors evolved resistance to biological control.

PubMed

Tomasetto, Federico; Tylianakis, Jason M; Reale, Marco; Wratten, Steve; Goldson, Stephen L

2017-04-11

Increased regulation of chemical pesticides and rapid evolution of pesticide resistance have increased calls for sustainable pest management. Biological control offers sustainable pest suppression, partly because evolution of resistance to predators and parasitoids is prevented by several factors (e.g., spatial or temporal refuges from attacks, reciprocal evolution by control agents, and contrasting selection pressures from other enemy species). However, evolution of resistance may become more probable as agricultural intensification reduces the availability of refuges and diversity of enemy species, or if control agents have genetic barriers to evolution. Here we use 21 y of field data from 196 sites across New Zealand to show that parasitism of a key pasture pest ( Listronotus bonariensis ; Argentine stem weevil) by an introduced parasitoid ( Microctonus hyperodae ) was initially nationally successful but then declined by 44% (leading to pasture damage of c. 160 million New Zealand dollars per annum). This decline was not attributable to parasitoid numbers released, elevation, or local climatic variables at sample locations. Rather, in all locations the decline began 7 y (14 host generations) following parasitoid introduction, despite releases being staggered across locations in different years. Finally, we demonstrate experimentally that declining parasitism rates occurred in ryegrass Lolium perenne , which is grown nationwide in high-intensity was significantly less than in adjacent plots of a less-common pasture grass ( Lolium multiflorum ), indicating that resistance to parasitism is host plant-dependent. We conclude that low plant and enemy biodiversity in intensive large-scale agriculture may facilitate the evolution of host resistance by pests and threaten the long-term viability of biological control.

Characterization of the Spatio-temporal Evolution of the Energy of Recent Tsunamis in Chile and its Connection with the Seismic Source and Geomorphological Conditions

NASA Astrophysics Data System (ADS)

Quiroz, M.; Cienfuegos, R.

2017-12-01

At present, there is good knowledge acquired by the scientific community on characterizing the evolution of tsunami energy at ocean and shelf scales. For instance, the investigations of Rabinovich (2013) and Yamazaki (2011), represent some important advances in this subject. In the present paper we rather focus on tsunami energy evolution, and ultimately its decay, in coastal areas because characteristic time scales of this process has implications for early warning, evacuation initiation, and cancelling. We address the tsunami energy evolution analysis at three different spatial scales, a global scale at the ocean basin level, in particular the Pacific Ocean basin, a regional scale comprising processes that occur at the continental shelf level, and finally a local scale comprising coastal areas or bays. These scales were selected following the motivation to understand how the response is associated with tsunami, and how the energy evolves until it is completely dissipated. Through signal processing methods, such as discrete and wavelets analysis, we analyze time series of recent tsunamigenic events in the main Chilean coastal cities. Based on this analysis, we propose a conceptual model based on the influence of geomorphological variables on the evolution and decay of tsunami energy. This model acts as a filter from the seismic source to the observed response in coastal zones. Finally, we hope to conclude with practical tools that will establish patterns of behavior and scaling of energy evolution through interconnections from seismic source variables and the geomorphological component to understand the response and predict behavior for a given site.

Temporal Representation in Semantic Graphs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Levandoski, J J; Abdulla, G M

2007-08-07

A wide range of knowledge discovery and analysis applications, ranging from business to biological, make use of semantic graphs when modeling relationships and concepts. Most of the semantic graphs used in these applications are assumed to be static pieces of information, meaning temporal evolution of concepts and relationships are not taken into account. Guided by the need for more advanced semantic graph queries involving temporal concepts, this paper surveys the existing work involving temporal representations in semantic graphs.

Numerical study of transient evolution of lifted jet flames: partially premixed flame propagation and influence of physical dimensions

NASA Astrophysics Data System (ADS)

Chen, Zhi; Ruan, Shaohong; Swaminathan, Nedunchezhian

2016-07-01

Three-dimensional (3D) unsteady Reynolds-averaged Navier-Stokes simulations of a spark-ignited turbulent methane/air jet flame evolving from ignition to stabilisation are conducted for different jet velocities. A partially premixed combustion model is used involving a correlated joint probability density function and both premixed and non-premixed combustion mode contributions. The 3D simulation results for the temporal evolution of the flame's leading edge are compared with previous two-dimensional (2D) results and experimental data. The comparison shows that the final stabilised flame lift-off height is well predicted by both 2D and 3D computations. However, the transient evolution of the flame's leading edge computed from 3D simulation agrees reasonably well with experiment, whereas evident discrepancies were found in the previous 2D study. This difference suggests that the third physical dimension plays an important role during the flame transient evolution process. The flame brush's leading edge displacement speed resulting from reaction, normal and tangential diffusion processes are studied at different typical stages after ignition in order to understand the effect of the third physical dimension further. Substantial differences are found for the reaction and normal diffusion components between 2D and 3D simulations especially in the initial propagation stage. The evolution of reaction progress variable scalar gradients and its interaction with the flow and mixing field in the 3D physical space have an important effect on the flame's leading edge propagation.

Oxygen evolution from single- and multiple-turnover light pulses: temporal kinetics of electron transport through PSII in sunflower leaves.

PubMed

Oja, Vello; Eichelmann, Hillar; Laisk, Agu

2011-12-01

Oxygen evolution per single-turnover flash (STF) or multiple-turnover pulse (MTP) was measured with a zirconium O(2) analyzer from sunflower leaves at 22 °C. STF were generated by Xe arc lamp, MTP by red LED light of up to 18000 μmol quanta m(-2) s(-1). Ambient O(2) concentration was 10-30 ppm, STF and MTP were superimposed on far-red background light in order to oxidize plastoquinone (PQ) and randomize S-states. Electron (e(-)) flow was calculated as 4 times O(2) evolution. Q (A) → Q (B) electron transport was investigated firing double STF with a delay of 0 to 2 ms between the two. Total O(2) evolution per two flashes equaled to that from a single flash when the delay was zero and doubled when the delay exceeded 2 ms. This trend was fitted with two exponentials with time constants of 0.25 and 0.95 ms, equal amplitudes. Illumination with MTP of increasing length resulted in increasing O(2) evolution per pulse, which was differentiated with an aim to find the time course of O(2) evolution with sub-millisecond resolution. At the highest pulse intensity of 2.9 photons ms(-1) per PSII, 3 e(-) initially accumulated inside PSII and the catalytic rate of PQ reduction was determined from the throughput rate of the fourth and fifth e(-). A light response curve for the reduction of completely oxidized PQ was a rectangular hyperbola with the initial slope of 1.2 PSII quanta per e(-) and V (m) of 0.6 e(-) ms(-1) per PSII. When PQ was gradually reduced during longer MTP, V (m) decreased proportionally with the fraction of oxidized PQ. It is suggested that the linear kinetics with respect to PQ are apparent, caused by strong product inhibition due to about equal binding constants of PQ and PQH(2) to the Q (B) site. The strong product inhibition is an appropriate mechanism for down-regulation of PSII electron transport in accordance with rate of PQH(2) oxidation by cytochrome b(6)f. © Springer Science+Business Media B.V. 2011

Following the Social Media: Aspect Evolution of Online Discussion

NASA Astrophysics Data System (ADS)

Tang, Xuning; Yang, Christopher C.

Due to the advance of Internet and Web 2.0 technologies, it is easy to extract thousands of threads about a topic of interest from an online forum but it is nontrivial to capture the blueprint of different aspects (i.e., subtopic, or facet) associated with the topic. To better understand and analyze a forum discussion given topic, it is important to uncover the evolution relationships (temporal dependencies) between different topic aspects (i.e. how the discussion topic is evolving). Traditional Topic Detection and Tracking (TDT) techniques usually organize topics as a flat structure but it does not present the evolution relationships between topic aspects. In addition, the properties of short and sparse messages make the content-based TDT techniques difficult to perform well in identifying evolution relationships. The contributions in this paper are two-folded. We formally define a topic aspect evolution graph modeling framework and propose to utilize social network information, content similarity and temporal proximity to model evolution relationships between topic aspects. The experimental results showed that, by incorporating social network information, our technique significantly outperformed content-based technique in the task of extracting evolution relationships between topic aspects.

SEAC4RS Data and Information Page

Atmospheric Science Data Center

2015-07-01

... deep convection throughout the troposphere; to determine the evolution of gases and aerosols in deep convective outflow and the implications ... influence of biomass burning and pollution, their temporal evolution, and ultimately, impacts on meteorological processes which can, in ...

Evolution of helping and harming in heterogeneous populations.

PubMed

Rodrigues, António M M; Gardner, Andy

2012-07-01

There has been much interest in understanding how demographic factors can mediate social evolution in viscous populations. Here, we examine the impact of heterogeneity in patch quality--that is, the availability of reproductive resources for each breeder--upon the evolution of helping and harming behaviors. We find that, owing to a cancellation of relatedness and kin competition effects, the evolution of obligate and facultative helping and harming is not influenced by the degree of viscosity in populations characterized by either spatial or temporal heterogeneity in patch quality. However, facultative helping and harming may be favored when there is both spatial and temporal heterogeneity in patch quality, with helping and harming being favored in both high-quality and low-quality patches. We highlight the prospect for using kin selection theory to explain within-population variation in social behavior, and point to the need for further theoretical and empirical investigation of this topic. © 2012 The Author(s).

Temperature evolution in silver nanoparticle doped PETN composite

NASA Astrophysics Data System (ADS)

Kameswari, D. P. S. L.; Kiran, P. Prem

2018-04-01

Optical absorption and the associated spatio-temporal evolution of temperature silver nanoparticles doped energetic material composite is presented. Silver nanoparticles of radii 10 - 150 nm are doped in Penta Erythrtol Tetra Nitrate (PETN), a secondary energetic material to form the composite materials. Of all the composites the ones doped with 35 nm sized nanoparticles have shown maximum absorption at excitation wavelength of 532 nm. The spatio-temporal evolution of temperature within these composites up on excitation with ns laser pulses of energy density 0.5 J/cm2 is studied. The role of particle sizes on the temperature of composites is studied and a maximum temperature of 2200 K at the nanoparticle interface is observed for 35 nm doped PETN composite.

Temporal record of osmium concentrations and 187Os/188Os in organic-rich mudrocks: Implications for the osmium geochemical cycle and the use of osmium as a paleoceanographic tracer

NASA Astrophysics Data System (ADS)

Lu, Xinze; Kendall, Brian; Stein, Holly J.; Hannah, Judith L.

2017-11-01

We present a compilation of 192Os concentrations (representing non-radiogenic Os) and initial 187Os/188Os isotope ratios from organic-rich mudrocks (ORM) to explore the evolution of the Os geochemical cycle during the past three billion years. The initial 187Os/188Os isotope ratio of a Re-Os isochron regression for ORM constrains the local paleo-seawater 187Os/188Os, which is governed by the relative magnitudes of radiogenic Os (old continental crust) and unradiogenic Os (mantle, extraterrestrial, and juvenile/mafic/ultramafic crust) fluxes to seawater. A first-order increase in seawater 187Os/188Os ratios occurs from the Archean to the Phanerozoic, and may reflect a combination of increasing atmosphere-ocean oxygenation and weathering of progressively more radiogenic continental crust due to in-growth of 187Os from radioactive decay of 187Re. Superimposed on this long-term trend are shorter-term fluctuations in seawater 187Os/188Os ratios as a result of climate change, emplacement of large igneous provinces, bolide impacts, tectonic events, changes in seafloor spreading rates, and lithological changes in crustal terranes proximal to sites of ORM deposition. Ediacaran-Phanerozoic ORM have mildly higher 192Os concentrations overall compared with pre-Ediacaran Proterozoic ORM based on the mean and 95% confidence interval of 10,000 median values derived using a bootstrap analysis for each time bin (insufficient Archean data exist for robust statistical comparisons). However, there are two groups with anomalously high 192Os concentrations that are distinguished by their initial 187Os/188Os isotope ratios. Ediacaran-Cambrian ORM from South China have radiogenic initial 187Os/188Os, suggesting their high 192Os concentrations reflect proximal Os-rich crustal source(s), ultraslow sedimentation rates, and/or other unusual depositional conditions. In contrast, the unradiogenic initial 187Os/188Os and high 192Os concentrations of some Mesozoic ORM can be tied to emplacement of large igneous provinces. Excluding these two anomalous groups and repeating the bootstrap analysis, we find that, overall, the 192Os concentrations for the Ediacaran-Phanerozoic and pre-Ediacaran Proterozoic time bins are not significantly different. An improved understanding of Os geochemical behavior in modern environments is required before our compilation can be fully used to constrain the temporal evolution of the seawater Os reservoir.

Social, moral, and temporal qualities: Pre-service teachers' considerations of evolution and creation

NASA Astrophysics Data System (ADS)

Hahn, Deirdre

The introduction of the theories of evolution into public education has created a history of misinterpretation and uncertainty about its application to understanding deep time and human origins. Conceptions about negative social and moral outcomes of evolution itself along with cognitive temporal constraints may be difficult for many individuals to uncouple from the scientific theory, serving to provoke the ongoing debate about the treatment of evolution in science education. This debate about teaching evolution is strongly influenced by groups who strive to add creationism to the science curriculum for a balanced treatment of human origins and to mediate implied negative social and moral outcomes of evolution. Individual conceptualization of evolution and creation may influence the choice of college students to teach science. This study is designed to examine if pre-service teachers' conceptualize an evolutionary and creationist process of human development using certain social, moral or temporal patterns; and if the patterns follow a negative conceptual theme. The pilot study explored 21 pre-service teachers' conceptual representation of an evolutionary process through personal narratives. Participants tended to link evolutionary changes with negative social and moral consequences and seemed to have difficulty envisioning change over time. The pilot study was expanded to include a quantitative examination of attribute patterns of an evolutionary and creationist developmental process. Seventy-three pre-service teachers participated in the second experiment and tended to fall evenly along a continuum of creationist and evolutionist beliefs about life. Using a chi-square and principle components analysis, participants were found to map concepts of evolution and creation onto each other using troubling attributes of development to distinguish negative change over time. A strong negative social and moral pattern of human development was found in the creation condition, though only a vague negative human developmental process was found for the evolution condition. Based on these results, pre-service teachers may not use evolution as a viable explanation of human origins, which may serve to contribute to evolution theory debates and discourage pre-service teachers' choice of being science instructors.

Genetic evolution, plasticity, and bet-hedging as adaptive responses to temporally autocorrelated fluctuating selection: A quantitative genetic model.

PubMed

Tufto, Jarle

2015-08-01

Adaptive responses to autocorrelated environmental fluctuations through evolution in mean reaction norm elevation and slope and an independent component of the phenotypic variance are analyzed using a quantitative genetic model. Analytic approximations expressing the mutual dependencies between all three response modes are derived and solved for the joint evolutionary outcome. Both genetic evolution in reaction norm elevation and plasticity are favored by slow temporal fluctuations, with plasticity, in the absence of microenvironmental variability, being the dominant evolutionary outcome for reasonable parameter values. For fast fluctuations, tracking of the optimal phenotype through genetic evolution and plasticity is limited. If residual fluctuations in the optimal phenotype are large and stabilizing selection is strong, selection then acts to increase the phenotypic variance (bet-hedging adaptive). Otherwise, canalizing selection occurs. If the phenotypic variance increases with plasticity through the effect of microenvironmental variability, this shifts the joint evolutionary balance away from plasticity in favor of genetic evolution. If microenvironmental deviations experienced by each individual at the time of development and selection are correlated, however, more plasticity evolves. The adaptive significance of evolutionary fluctuations in plasticity and the phenotypic variance, transient evolution, and the validity of the analytic approximations are investigated using simulations. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Experiments on waves under impulsive wind forcing in view of the Phillips (1957) theory

NASA Astrophysics Data System (ADS)

Shemer, Lev; Zavadsky, Andrey

2016-11-01

Only limited information is currently available on the initial stages of wind-waves growth from rest under sudden wind forcing; the mechanisms leading to the appearance of waves are still not well understood. In the present work, waves emerging in a small-scale laboratory facility under the action of step-like turbulent wind forcing are studied using capacitance and laser slope gauges. Measurements are performed at a number of fetches and for a range of wind velocities. Taking advantage of the fully automated experimental procedure, at least 100 independent realizations are recorded for each wind velocity at every fetch. The accumulated data sets allow calculating ensemble-averaged values of the measured parameters as a function of time elapsed from the blower activation. The accumulated results on the temporal variation of wind-wave field initially at rest allow quantitative comparison with the theory of Phillips (1957). Following Phillips, appearance of the initial detectable ripples was considered first, while the growth of short gravity waves at later times was analyzed separately. Good qualitative and partial quantitative agreement between the Phillips predictions and the measurements was obtained for both those stages of the initial wind-wave field evolution.

Initiation and propagation of mixed mode fractures in granite and sandstone

NASA Astrophysics Data System (ADS)

Rück, Marc; Rahner, Roman; Sone, Hiroki; Dresen, Georg

2017-10-01

We investigate mixed mode fracture initiation and propagation in experimentally deformed granite and sandstone. We performed a series of asymmetric loading tests to induce fractures in cylindrical specimens at confining pressures up to 20 MPa. Loading was controlled using acoustic emission (AE) feedback control, which allows studying quasi-static fracture propagation for several hours. Location of acoustic emissions reveals distinct differences in spatial-temporal fracture evolution between granite and sandstone samples. Before reaching peak stress in experiments performed on granite, axial fractures initiate first at the edge of the indenter and then propagate through the entire sample. Secondary inclined fractures develop during softening of the sample. In sandstone, inclined shear fractures nucleate at peak stress and propagate through the specimen. AE source type analysis shows complex fracturing in both materials with pore collapse contributing significantly to fracture growth in sandstone samples. We compare the experimental results with numerical models to analyze stress distribution and energy release rate per unit crack surface area in the samples at different stages during fracture growth. We thereby show that for both rock types the energy release rate increases approximately linearly during fracture propagation. The study illuminates how different material properties modify fracture initiation direction under similar loading conditions.

Nutritional Competence and Resilience among Hemodialysis Patients in the Setting of Dialysis Initiation and Hospitalization

PubMed Central

Wong, Michelle M.Y.; Usvyat, Len A.; Xiao, Qingqing; Kotanko, Peter; Maddux, Franklin W.

2015-01-01

Background and objectives Dialysis patients have a high risk for inadequate nutrition. Their nutritional status is particularly susceptible to deterioration when faced with intercurrent events such as hospitalization. This study was conducted to improve the understanding of the temporal evolution of nutritional parameters as a foundation for rational and proactive nutritional intervention. Design, setting, participants, & measurements A retrospective cohort study was performed to investigate the temporal evolution of nutritional parameters (serum albumin, serum phosphate, serum creatinine, equilibrated normalized protein catabolic rate, and interdialytic weight gain) and a composite nutritional score derived from these parameters, in two populations: (1) incident hemodialysis (HD) patients who started HD between January 2006 and December 2011 and were followed for up to 54 months (median 16.3), and (2) prevalent patients with HD vintage ≥2.5 years who were hospitalized between January 2006 and December 2011 and followed from 6 months before to 6 months after hospitalization. Results In incident patients (n=126,964), each of the nutritional parameters improved after HD initiation, with a mean composite nutritional score at the 24th percentile at the start of HD and reaching a plateau at the 57th percentile toward the end of the second year on dialysis. Nutritional parameters increased more rapidly and reached higher values among patients who survived longer. In hospitalized patients (n=14,193), the nutritional parameters and the composite score began to decline 1–2 months before hospitalization, reached their lowest level in the month after hospitalization, and then partially recovered in the subsequent 5 months. The degree of recovery of the nutritional score was inversely related to the number of rehospitalizations. Conclusions This study increases the understanding of nutritional resilience and its determinants in HD patients. Application of the nutritional score, pending further validation, may facilitate targeted and timely interventions to avert the negative consequences of inadequate nutrition in chronic HD patients. PMID:26185260

The temporal distribution of directional gradients under selection for an optimum.

PubMed

Chevin, Luis-Miguel; Haller, Benjamin C

2014-12-01

Temporal variation in phenotypic selection is often attributed to environmental change causing movements of the adaptive surface relating traits to fitness, but this connection is rarely established empirically. Fluctuating phenotypic selection can be measured by the variance and autocorrelation of directional selection gradients through time. However, the dynamics of these gradients depend not only on environmental changes altering the fitness surface, but also on evolution of the phenotypic distribution. Therefore, it is unclear to what extent variability in selection gradients can inform us about the underlying drivers of their fluctuations. To investigate this question, we derive the temporal distribution of directional gradients under selection for a phenotypic optimum that is either constant or fluctuates randomly in various ways in a finite population. Our analytical results, combined with population- and individual-based simulations, show that although some characteristic patterns can be distinguished, very different types of change in the optimum (including a constant optimum) can generate similar temporal distributions of selection gradients, making it difficult to infer the processes underlying apparent fluctuating selection. Analyzing changes in phenotype distributions together with changes in selection gradients should prove more useful for inferring the mechanisms underlying estimated fluctuating selection. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Network Analysis of Foramen Ovale Electrode Recordings in Drug-resistant Temporal Lobe Epilepsy Patients

PubMed Central

Sanz-García, Ancor; Vega-Zelaya, Lorena; Pastor, Jesús; Torres, Cristina V.; Sola, Rafael G.; Ortega, Guillermo J.

2016-01-01

Approximately 30% of epilepsy patients are refractory to antiepileptic drugs. In these cases, surgery is the only alternative to eliminate/control seizures. However, a significant minority of patients continues to exhibit post-operative seizures, even in those cases in which the suspected source of seizures has been correctly localized and resected. The protocol presented here combines a clinical procedure routinely employed during the pre-operative evaluation of temporal lobe epilepsy (TLE) patients with a novel technique for network analysis. The method allows for the evaluation of the temporal evolution of mesial network parameters. The bilateral insertion of foramen ovale electrodes (FOE) into the ambient cistern simultaneously records electrocortical activity at several mesial areas in the temporal lobe. Furthermore, network methodology applied to the recorded time series tracks the temporal evolution of the mesial networks both interictally and during the seizures. In this way, the presented protocol offers a unique way to visualize and quantify measures that considers the relationships between several mesial areas instead of a single area. PMID:28060326

PLANNING AND RESPONSE IN THE AFTERMATH OF A LARGE CRISIS: AN AGENT-BASED INFORMATICS FRAMEWORK*

PubMed Central

Barrett, Christopher; Bisset, Keith; Chandan, Shridhar; Chen, Jiangzhuo; Chungbaek, Youngyun; Eubank, Stephen; Evrenosoğlu, Yaman; Lewis, Bryan; Lum, Kristian; Marathe, Achla; Marathe, Madhav; Mortveit, Henning; Parikh, Nidhi; Phadke, Arun; Reed, Jeffrey; Rivers, Caitlin; Saha, Sudip; Stretz, Paula; Swarup, Samarth; Thorp, James; Vullikanti, Anil; Xie, Dawen

2014-01-01

We present a synthetic information and modeling environment that can allow policy makers to study various counter-factual experiments in the event of a large human-initiated crisis. The specific scenario we consider is a ground detonation caused by an improvised nuclear device in a large urban region. In contrast to earlier work in this area that focuses largely on the prompt effects on human health and injury, we focus on co-evolution of individual and collective behavior and its interaction with the differentially damaged infrastructure. This allows us to study short term secondary and tertiary effects. The present environment is suitable for studying the dynamical outcomes over a two week period after the initial blast. A novel computing and data processing architecture is described; the architecture allows us to represent multiple co-evolving infrastructures and social networks at a highly resolved temporal, spatial, and individual scale. The representation allows us to study the emergent behavior of individuals as well as specific strategies to reduce casualties and injuries that exploit the spatial and temporal nature of the secondary and tertiary effects. A number of important conclusions are obtained using the modeling environment. For example, the studies decisively show that deploying ad hoc communication networks to reach individuals in the affected area is likely to have a significant impact on the overall casualties and injuries. PMID:25580055

PLANNING AND RESPONSE IN THE AFTERMATH OF A LARGE CRISIS: AN AGENT-BASED INFORMATICS FRAMEWORK*

PubMed

Barrett, Christopher; Bisset, Keith; Chandan, Shridhar; Chen, Jiangzhuo; Chungbaek, Youngyun; Eubank, Stephen; Evrenosoğlu, Yaman; Lewis, Bryan; Lum, Kristian; Marathe, Achla; Marathe, Madhav; Mortveit, Henning; Parikh, Nidhi; Phadke, Arun; Reed, Jeffrey; Rivers, Caitlin; Saha, Sudip; Stretz, Paula; Swarup, Samarth; Thorp, James; Vullikanti, Anil; Xie, Dawen

2013-01-01

We present a synthetic information and modeling environment that can allow policy makers to study various counter-factual experiments in the event of a large human-initiated crisis. The specific scenario we consider is a ground detonation caused by an improvised nuclear device in a large urban region. In contrast to earlier work in this area that focuses largely on the prompt effects on human health and injury, we focus on co-evolution of individual and collective behavior and its interaction with the differentially damaged infrastructure. This allows us to study short term secondary and tertiary effects. The present environment is suitable for studying the dynamical outcomes over a two week period after the initial blast. A novel computing and data processing architecture is described; the architecture allows us to represent multiple co-evolving infrastructures and social networks at a highly resolved temporal, spatial, and individual scale. The representation allows us to study the emergent behavior of individuals as well as specific strategies to reduce casualties and injuries that exploit the spatial and temporal nature of the secondary and tertiary effects. A number of important conclusions are obtained using the modeling environment. For example, the studies decisively show that deploying ad hoc communication networks to reach individuals in the affected area is likely to have a significant impact on the overall casualties and injuries.

Thermal and temporal evolution of microstructure in polycrystalline ZnO

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kondal, Neha; Tiwari, Sanjiv Kumar, E-mail: sanjivkumar.tiwari@juit.ac.in

2016-05-06

Tug between electronics and spintronics has opened up new area of research named as dilute magnetic semiconductors (DMS), ZnO is one of the most reliable candidates for spintronic devices and DMS. Since, pure and transition metal doped polycrystalline ZnO shows room temperature ferromagnetism, therefore it is very important to gain insight into its microstructure (MS) evolution. We report thermal evolution of MS of pure ZnO on sintering it at 200 °C, 400 °C, 600 °C, and 800 °C in ambient atmosphere for two hours. Temporal evolution at fixed temperature was analyzed using mean field model of internal energy and entropy.more » Grain size of ZnO MS were analyzed using integral breadth method of X-ray diffraction (XRD) lines using Voigt profile fit,. XRD line corresponding to [101] plane shifts from 36.17° to 36.28° whereas grain size increases from 67.5 nm to 93.7 nm with increase of temperature from 23°C to 800°C respectively. Grain growth with increase of temperature show Arrhenius type behavior with activation energy of 30.77 kJ-mol{sup −1} and temporal growth shows diffusive behavior with exponent 0.5.« less

Spatio-temporal development of sinkholes on the eastern shore of the Dead Sea

NASA Astrophysics Data System (ADS)

Holohan, Eoghan; Saberi, Leila; Al-Halbouni, Djamil; Sawarieh, Ali; Closson, Damien; Alrshdan, Hussam; Walter, Thomas; Dahm, Torsten

2017-04-01

The ongoing, largely anthropogenically-forced decline of the Dead Sea is associated with the most prolific development of sinkholes worldwide. The fall in hydrological base level since the 1960s is thought to enable relatively fresh ground waters to dissolve underground salt deposits that were previously in equilibrium with hypersaline Dead Sea brine. Sinkhole development in response to this dissolution began in the 1980s and is still ongoing; it represents a significant geohazard in the Dead Sea region. We present new research undertaken within the Dead Sea Research Venue (DESERVE) on the spatio-temporal evolution of the main sinkhole-affected site on the Eastern shore of the Dead Sea, at Ghor Al-Haditha in Jordan. Our data set includes optical satellite imagery, aerial survey photographs and drone-based photogrammetric surveys with high spatial (< 1 m2 - 0.05 m per pixel) and temporal (decadal from 1970-2010, annual from 2004-2016) resolution. These enable new quantitative insights into this, the largest of all the Dead Sea sinkhole sites. Our analysis shows that there are now over 800 sinkholes at Ghor al-Haditha. Sinkholes initiated as spatially distinct clusters in the late 1980's to early 1990s. While some clusters have since become inactive, most have expanded and merged with time. New clusters have also developed, mainly in the more recently exposed north of the area. With the retreat of the Dead Sea, the roughly coastline-parallel zone of sinkhole formation has expanded unevenly but systematically seawards. Such a seaward migration of sinkhole formation is predicted from hydrogeological theory, but as yet not consistently observed elsewhere at the Dead Sea. The rate of sinkhole formation at Ghor Haditha accelerated markedly during the late 2000s to a peak of about 100 per year in 2009. Similar accelerations are observed on the western shore, but differ in timing. The rate of sinkhole formation on the Eastern shore has since declined to about 50 per year. Such differences in the overall spatio-temporal evolution of sinkholes on the eastern and western shores of the Dead Sea likely highlights the important role of local hydrogeological conditions and processes in governing sinkhole development.

From Outlet Glacier Changes to Ice Sheet Mass Balance - Evolution of Greenland Ice Sheet from Laser Altimetry Data

NASA Astrophysics Data System (ADS)

Csatho, B. M.; Schenk, A.; Nagarajan, S.; Babonis, G. S.

2010-12-01

Investigations of ice sheet mass balance and the changing dynamics of outlet glaciers have been hampered by the lack of comprehensive data. In recent years, this situation has been remedied. Satellite laser altimetry data from the Ice Cloud and land Elevation Satellite mission (ICESat), combined with airborne laser altimetry, provide accurate measurements of surface elevation changes, and surface velocities derived from various satellite platforms yield crucial information on changing glacier dynamics. Taken together, a rich and diverse data set is emerging that allows for characterizing the spatial and temporal evolution of ice sheets and outlet glaciers. In particular, it enables quantitative studies of outlet glaciers undergoing rapid and complex changes. Although airborne and laser altimetry have been providing precise measurements of ice sheet topography since the early 1990s, determining detailed and accurate spatial and temporal distribution of surface changes remains a challenging problem. We have developed a new, comprehensive method, called Surface Elevation Reconstruction And Change detection (SERAC), which estimates surface changes by a simultaneous reconstruction of surface topography from fused multisensor data. The mathematical model is based on the assumption that for a small surface area, only the absolute elevation changes over time but not the shape of the surface patch. Therefore, laser points of all time epochs contribute to the shape parameters; points of each time period determine the absolute elevation of the surface patch at that period. This method provides high-resolution surface topography, precise changes and a rigorous error estimate of the quantities. By using SERAC we combined ICESat and ATM laser altimetry data to determine the evolution of surface change rates of the whole Greenland Ice Sheet between 2003 and 2009 on a high-resolution grid. Our reconstruction, consistent with GRACE results, shows ice sheet thinning propagating along the NW coast, and thinning expanding to higher elevations in SW and N Greenland. Several outlet glaciers, for example Humboldt and Petermann glaciers in NW Greenland and Kangilerngata Sermia in W Greenland exhibit a complex spatial and temporal pattern of thickening-thinning with regions of thickening observed at lower elevations. We will examine the thickening and thinning history and the record of surface velocity of these glaciers to investigate the processes responsible for initiating and sustaining these changes. Moreover, by analyzing the detailed surface elevation change history along flowlines or across drainage basins, the propagation of thinning following perturbations at the glacier terminus can be investigated. Results, depicting the evolution of surface elevation changes of three major outlet glaciers, Jakobshavn, Helheim and Kangerlussuaq glaciers, will be shown.

Temporal predictive mechanisms modulate motor reaction time during initiation and inhibition of speech and hand movement.

PubMed

Johari, Karim; Behroozmand, Roozbeh

2017-08-01

Skilled movement is mediated by motor commands executed with extremely fine temporal precision. The question of how the brain incorporates temporal information to perform motor actions has remained unanswered. This study investigated the effect of stimulus temporal predictability on response timing of speech and hand movement. Subjects performed a randomized vowel vocalization or button press task in two counterbalanced blocks in response to temporally-predictable and unpredictable visual cues. Results indicated that speech and hand reaction time was decreased for predictable compared with unpredictable stimuli. This finding suggests that a temporal predictive code is established to capture temporal dynamics of sensory cues in order to produce faster movements in responses to predictable stimuli. In addition, results revealed a main effect of modality, indicating faster hand movement compared with speech. We suggest that this effect is accounted for by the inherent complexity of speech production compared with hand movement. Lastly, we found that movement inhibition was faster than initiation for both hand and speech, suggesting that movement initiation requires a longer processing time to coordinate activities across multiple regions in the brain. These findings provide new insights into the mechanisms of temporal information processing during initiation and inhibition of speech and hand movement. Copyright © 2017 Elsevier B.V. All rights reserved.

The Role of Rhenium on the Temporal Evolution of the Nanostructure of a Model Ni-Al-Cr-Re Superalloy

NASA Technical Reports Server (NTRS)

Yoon, Kevin E.; Noebe, Ronald D.; Seidman, David N.

2004-01-01

Rhenium (2 at.%) additions to a model Ni-8.5 at.% Cr-10 at.% Al alloy are studied with respect to its effects on the temporal evolution of the nanostructure and the partitioning behavior of the four elements between the gamma (fcc) and gamma' (L1(sub 2)) phases. Chemical evolution of this quaternary alloy aged at 1073 K from 0.25 to 264 h, is investigated by three-dimensional atom-probe (3DAP) microscopy. The morphology of gamma'-precipitates remains spheroidal, even at an aging time of 264 h. The results demonstrate that Re slows the coarsening of gamma'-precipitates, in comparison to the ternary Ni-10 at.% A1-8.5 at.% Cr alloy at 1073 K.

Using of fiber-array diagnostic to measure the propagation of fast axial ionization wave during breakdown of electrically exploding tungsten wire in vacuum.

PubMed

Shi, Huantong; Zou, Xiaobing; Wang, Xinxin

2017-12-01

The physical process of electrical explosion of wires in vacuum is featured with the surface discharge along the wire, which generates the corona plasma layer and terminates the Joule heating of the wire core. In this paper, a fiber-array probe was designed to directly measure the radiation of surface arc with spatial and temporal resolution. The radiation of the exploding wire was casted to the section of an optical-fiber-array by a lens and transmitted to PIN diodes and finally collected with an oscilloscope. This probe enables direct diagnostics of the evolution of surface discharge with high temporal resolution and certain spatial resolution. The radiation of a tungsten wire driven by a positive current pulse was measured, and results showed that surface discharge initiates near the cathode and propagates toward the anode with a speed of 7.7 ± 1.6 mm/ns; further estimations showed that this process is responsible for the "conical" structure of the exploding wire.

Dramatic Enhancement in Photoresponse of β-In2S3 through Suppression of Dark Conductivity by Synthetic Control of Defect-Induced Carrier Compensation.

PubMed

Chaudhari, Nilima; Mandal, Lily; Game, Onkar; Warule, Sambhaji; Phase, Deodatta; Jadkar, Sandesh; Ogale, Satishchandra

2015-08-19

We report on the synthesis of dense and faceted indium sulfide (β-In2S3) nano-octahedron films on fluorine-doped tin oxide-coated glass by the hydrothermal method and their photoresponse properties in a flip chip device configuration. We have examined the temporal evolution of the phase constitution, morphology, and optoelectronic properties for films obtained after growth interruption at specific intervals. It is noted that, initially, an In(OH)3 film forms, which is gradually transformed to the β-In2S3 phase over time. In the case of the film wherein most, but not all, of In(OH)3 is consumed, an exceptionally large photoresponse (light to dark current ratio) of ∼10(4) and response time(s) (rise/fall) of ∼88/280 ms are realized. This superior performance is attributed to nearly complete carrier compensation achievable in the system under high pressure growth leading to dramatic reduction of dark conductivity. It is argued that the temporally growth-controlled equilibrium between quasi-In interstitials and cation vacancies dictates the optoelectronic properties.

Using of fiber-array diagnostic to measure the propagation of fast axial ionization wave during breakdown of electrically exploding tungsten wire in vacuum

NASA Astrophysics Data System (ADS)

Shi, Huantong; Zou, Xiaobing; Wang, Xinxin

2017-12-01

The physical process of electrical explosion of wires in vacuum is featured with the surface discharge along the wire, which generates the corona plasma layer and terminates the Joule heating of the wire core. In this paper, a fiber-array probe was designed to directly measure the radiation of surface arc with spatial and temporal resolution. The radiation of the exploding wire was casted to the section of an optical-fiber-array by a lens and transmitted to PIN diodes and finally collected with an oscilloscope. This probe enables direct diagnostics of the evolution of surface discharge with high temporal resolution and certain spatial resolution. The radiation of a tungsten wire driven by a positive current pulse was measured, and results showed that surface discharge initiates near the cathode and propagates toward the anode with a speed of 7.7 ± 1.6 mm/ns; further estimations showed that this process is responsible for the "conical" structure of the exploding wire.

Evolutionary change in the structure of the regulatory region that drives tissue and temporally regulated expression of alcohol dehydrogenase gene in Drosophila funebris.

PubMed

Amador, A; Papaceit, M; Juan, E

2001-06-01

The Adh locus of Drosophilidae is organized as a single gene transcribed from two spatially and temporally regulated promoters except in species of the repleta group, which have two single promoter genes. Here we show that in Drosophila funebris the Adh gene is transcribed from a single promoter, in both larva and adult, with qualitative and quantitative species specific-differences in tissue distribution. The gene is expressed in larval fat body but in other tissues such as gastric caeca, midgut and Malpighian tubules its expression is reduced compared to most Drosophilidae species, and in adults it is almost limited to the fat body. The comparative analysis of gene expression of two strains, which differ by a duplication, indicates that the cis elements necessary for this pattern of expression in larvae are included in the region of 1.55 kb upstream of the transcription initiation site. This new organization reveals the evolution of a different regulatory strategy to express the Adh gene in the subgenus Drosophila.

Surface-Enhanced Impulsive Coherent Vibrational Spectroscopy

PubMed Central

Du, Juan; Harra, Juha; Virkki, Matti; Mäkelä, Jyrki M.; Leng, Yuxin; Kauranen, Martti; Kobayashi, Takayoshi

2016-01-01

Surface-enhanced Raman spectroscopy (SERS) has attracted a lot of attention in molecular sensing because of the remarkable ability of plasmonic metal nanostructures to enhance the weak Raman scattering process. On the other hand, coherent vibrational spectroscopy triggered by impulsive excitation using ultrafast laser pulses provides complete information about the temporal evolution of molecular vibrations, allowing dynamical processes in molecular systems to be followed in “real time”. Here, we combine these two concepts and demonstrate surface-enhanced impulsive vibrational spectroscopy. The vibrational modes of the ground and excited states of poly[2-methoxy-5-(2-ethylhexyloxy)−1,4-phenylenevinylene] (MEH-PPV), spin-coated on a substrate covered with monodisperse silver nanoparticles, are impulsively excited with a sub-10 fs pump pulse and characterized with a delayed broad-band probe pulse. The maximum enhancement in the spectrally and temporally resolved vibrational signatures averaged over the whole sample is about 4.6, while the real-time information about the instantaneous vibrational amplitude together with the initial vibrational phase is preserved. The phase is essential to determine the vibrational contributions from the ground and excited states. PMID:27812020

Measuring cancer evolution from the genome.

PubMed

Graham, Trevor A; Sottoriva, Andrea

2017-01-01

The temporal dynamics of cancer evolution remain elusive, because it is impractical to longitudinally observe cancers unperturbed by treatment. Consequently, our knowledge of how cancers grow largely derives from inferences made from a single point in time - the endpoint in the cancer's evolution, when it is removed from the body and studied in the laboratory. Fortuitously however, the cancer genome, by virtue of ongoing mutations that uniquely mark clonal lineages within the tumour, provides a rich, yet surreptitious, record of cancer development. In this review, we describe how a cancer's genome can be analysed to reveal the temporal history of mutation and selection, and discuss why both selective and neutral evolution feature prominently in carcinogenesis. We argue that selection in cancer can only be properly studied once we have some understanding of what the absence of selection looks like. We review the data describing punctuated evolution in cancer, and reason that punctuated phenotype evolution is consistent with both gradual and punctuated genome evolution. We conclude that, to map and predict evolutionary trajectories during carcinogenesis, it is critical to better understand the relationship between genotype change and phenotype change. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Information Mining of Spatio-Temporal Evolution of Lakes Based on Multiple Dynamic Measurements

NASA Astrophysics Data System (ADS)

Feng, W.; Chen, J.

2017-09-01

Lakes are important water resources and integral parts of the natural ecosystem, and it is of great significance to study the evolution of lakes. The area of each lake increased and decreased at the same time in natural condition, only but the net change of lakes' area is the result of the bidirectional evolution of lakes. In this paper, considering the effects of net fragmentation, net attenuation, swap change and spatial invariant part in lake evolution, a comprehensive evaluation indexes of lake dynamic evolution were defined,. Such degree contains three levels of measurement: 1) the swap dynamic degree (SDD) reflects the space activity of lakes in the study period. 2) the attenuation dynamic degree (ADD) reflects the net attenuation of lakes into non-lake areas. 3) the fragmentation dynamic degree (FDD) reflects the trend of lakes to be divided and broken into smaller lakes. Three levels of dynamic measurement constitute the three-dimensional "Swap - attenuation - fragmentation" dynamic evolution measurement system of lakes. To show its effectiveness, the dynamic measurement was applied to lakes in Jianghan Plain, the middle Yangtze region of China for a more detailed analysis of lakes from 1984 to 2014. In combination with spatial-temporal location characteristics of lakes, the hidden information in lake evolution in the past 30 years can be revealed.

Experimental Verification of a Jarzynski-Related Information-Theoretic Equality by a Single Trapped Ion.

PubMed

Xiong, T P; Yan, L L; Zhou, F; Rehan, K; Liang, D F; Chen, L; Yang, W L; Ma, Z H; Feng, M; Vedral, V

2018-01-05

Most nonequilibrium processes in thermodynamics are quantified only by inequalities; however, the Jarzynski relation presents a remarkably simple and general equality relating nonequilibrium quantities with the equilibrium free energy, and this equality holds in both the classical and quantum regimes. We report a single-spin test and confirmation of the Jarzynski relation in the quantum regime using a single ultracold ^{40}Ca^{+} ion trapped in a harmonic potential, based on a general information-theoretic equality for a temporal evolution of the system sandwiched between two projective measurements. By considering both initially pure and mixed states, respectively, we verify, in an exact and fundamental fashion, the nonequilibrium quantum thermodynamics relevant to the mutual information and Jarzynski equality.

Atomic processes and equation of state of high Z plasmas for EUV sources and their effects on the spatial and temporal evolution of the plasmas

NASA Astrophysics Data System (ADS)

Sasaki, Akira; Sunahara, Atushi; Furukawa, Hiroyuki; Nishihara, Katsunobu; Nishikawa, Takeshi; Koike, Fumihiro

2016-03-01

Laser-produced plasma (LPP) extreme ultraviolet (EUV) light sources have been intensively investigated due to potential application to next-generation semiconductor technology. Current studies focus on the atomic processes and hydrodynamics of plasmas to develop shorter wavelength sources at λ = 6.x nm as well as to improve the conversion efficiency (CE) of λ = 13.5 nm sources. This paper examines the atomic processes of mid-z elements, which are potential candidates for λ = 6.x nm source using n=3-3 transitions. Furthermore, a method to calculate the hydrodynamics of the plasmas in terms of the initial interaction between a relatively weak prepulse laser is presented.

Liquid-metal-fed Pulsed Plasma Thrusters for In-space Propulsion

NASA Technical Reports Server (NTRS)

Markusic, Thomas E.

2004-01-01

Liquid metal propellants may provide a path toward more reliable and efficient pulsed plasma thrusters (PPTs). Conceptual thruster designs which eliminate the need for high current switches and propellant metering valves are described. Propellant loading techniques are suggested that show promise to increase thruster propellant utilization, dynamic, and electrical efficiency. Calibration results from a compact, electromagnetically-pumped propellant feed system are presented. Results for lithium and gallium propellants show capability to meter propellant at flow rates up to 10 +/- 0.1 mg/s. Experiments investigating the initiation of arc discharges using liquid metal droplets are presented. High speed photography and laser interferometry provide spatially and temporally resolved information on the decomposition of liquid metal droplets , and the evolution of the accelerating current channel.

Gamma-ray bursts from internal shocks in a relativistic wind: a hydrodynamical study

NASA Astrophysics Data System (ADS)

Daigne, F.; Mochkovitch, R.

2000-06-01

The internal shock model for gamma-ray bursts involves shocks taking place in a relativistic wind with a very inhomogeneous initial distribution of the Lorentz factor. We have developed a 1D lagrangian hydrocode to follow the evolution of such a wind and the results we have obtained are compared to those of a simpler model presented in a recent paper (Daigne & Mochkovitch \\cite{Daigne2}) where all pressure waves are suppressed in the wind so that shells with different velocities only interact by direct collisions. The detailed hydrodynamical calculation essentially confirms the conclusion of the simple model: the main temporal and spectral properties of gamma-ray bursts can be reproduced by internal shocks in a relativistic wind.

Adaptive evolution of Escherichia coli to Ciprofloxacin in controlled stress environments: emergence of tolerance in spatial and temporal gradients

NASA Astrophysics Data System (ADS)

Deng, J.; Sanford, R. A.; Dong, Y.; Shechtman, L. A.; Zhou, L.; Alcalde, R.; Werth, C. J.; Fouke, B. W.

2016-12-01

Microorganisms in nature have evolved in response to a variety of environmental stresses, including gradients of temperature, pH, substrate availability and aqueous chemistry. While environmental stresses are considered to be the driving forces of adaptive evolution, the impact and extent of any specific stress needed to drive such changes has not been well characterized. In this study, the antibiotic Ciprofloxacin was used as a stressor and systematically applied to E. coli st. 307 cells via a spatial gradient in a microfluidic pore network and a temporal gradient in batch cultures. The microfluidic device facilitated in vitro real-time tracking of bacterial abundances and dynamic spatial distributions in response to the gradients of both the antibiotic and nutrients. Cells collected from the microfluidic device showed growth on plates containing up to 10-times the original minimum inhibition concentration (MIC). In batch systems, Ciprofloxacin was used to evaluate adaptive responses via temporal gradients, in which the stressor concentration was incrementally increased over time with each transfer of the culture after 24 hours of growth. Responses of E. coli 307 to these stress patterns were measured by quantifying changes in the MIC for Ciprofloxacin. Over a period of 18 days of step-wise concentration increments, bacterial cells were observed to acquire tolerance gradually and eventually adapt to a 28-fold increase in the original MIC. Samples at different stages within the temporal Ciprofloxacin gradient treatment show different extents of resistance. All samples exhibited resistance exceeding the highest exposure stress concentration. In combination with the spatial and temporal gradient systems, this work provides the first comprehensive measure of the dynamic resistance of E. coli in response to Ciprofloxacin concentration gradients. These will provide invaluable insights to understand the effects of antibiotic stresses on bacterial adaptive evolution in medical settings and shed light on understanding the mechanics of microbial evolution.

The temporal characteristics of seizures in neonatal hypoxic ischemic encephalopathy treated with hypothermia.

PubMed

Lynch, Niamh E; Stevenson, Nathan J; Livingstone, Vicki; Mathieson, Sean; Murphy, Brendan P; Rennie, Janet M; Boylan, Geraldine B

2015-12-01

The characteristics of electrographic seizures in newborns with hypoxic-ischaemic encephalopathy (HIE) treated with therapeutic hypothermia (TH) are poorly described. This retrospective, observational study provides reference data on the characteristics of seizures and their evolution over time in newborns with HIE receiving whole-body TH. The cohort under analysis included 23 infants with HIE and seizures defined by multi-channel EEG recordings. Clinical presentation, details of TH and antiepileptic drugs used were recorded. Time from first to last-recorded electrographic seizure (seizure period) was calculated. Temporal characteristics of seizures - total burden, duration, number, burden in minutes per hour, distribution of burden over time (temporal evolution), time from seizure onset to maximum seizure burden (Tmsb), T1, and time from Tmsb to seizure offset, T2 - were analysed. The median age at electrographic seizure onset was 13.1h (IQR: 11.4 to 22.0). Tmsb was reached at a median age of 19.4 hours (IQR: 12.2 to 29.7). Median seizure period was 16.5h (IQR: 7.0 to 49.7), median number of seizures per hour was 1.9 (IQR: 1.0 to 3.3). The seizure burden was 4.0 min/h (IQR: 2.0 to 7.0). There was no consistent pattern in the temporal evolution of seizures in neonates treated with TH. The skewness was neither positive nor negative (p-value=0.15), there was no difference between the duration of T1 and T2 (p-value=0.09) and no difference in the seizure burden between T1 and T2 (p=0.09). There was an association between Tmsb and Phenobarbital (PB) administration (r=0.76, p-value<0.001). There is no consistent temporal evolution of seizure burden in neonates treated with TH. Seizures are diffuse, and their characteristics are variable. Copyright © 2015. Published by Elsevier Ltd.

Computing and visualizing time-varying merge trees for high-dimensional data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oesterling, Patrick; Heine, Christian; Weber, Gunther H.

2017-06-03

We introduce a new method that identifies and tracks features in arbitrary dimensions using the merge tree -- a structure for identifying topological features based on thresholding in scalar fields. This method analyzes the evolution of features of the function by tracking changes in the merge tree and relates features by matching subtrees between consecutive time steps. Using the time-varying merge tree, we present a structural visualization of the changing function that illustrates both features and their temporal evolution. We demonstrate the utility of our approach by applying it to temporal cluster analysis of high-dimensional point clouds.

Cranial base morphology and temporal bone pneumatization in Asian Homo erectus.

PubMed

Balzeau, Antoine; Grimaud-Hervé, Dominique

2006-10-01

The external morphological features of the temporal bone are used frequently to determine taxonomic affinities of fossils of the genus Homo. Temporal bone pneumatization has been widely studied in great apes and in early hominids. However, this feature is rarely examined in the later hominids, particularly in Asian Homo erectus. We provide a comparative morphological and quantitative analysis of Asian Homo erectus from the sites of Ngandong, Sambungmacan, and Zhoukoudian, and of Neandertals and anatomically modern Homo sapiens in order to discuss causes and modalities of temporal bone pneumatization during hominid evolution. The evolution of temporal bone pneumatization in the genus Homo is more complex than previously described. Indeed, the Zhoukoudian fossils have a unique pattern of temporal bone pneumatization, whereas Ngandong and Sambungmacan fossils, as well as the Neandertals, more closely resemble the modern human pattern. Moreover, these Chinese fossils are characterized by a wide midvault and a relatively narrow occipital bone. Our results support the point of view that cell development does not play an active role in determining cranial base morphology. Instead, pneumatization is related to available space and to temporal bone morphology, and its development is related to correlated morphology and the relative disposition of the bones and cerebral lobes. Because variation in pneumatization is extensive within the same species, the phyletic implications of pneumatization are limited in the taxa considered here.

Colloidal crystal growth monitored by Bragg diffraction interference fringes.

PubMed

Bohn, Justin J; Tikhonov, Alexander; Asher, Sanford A

2010-10-15

We monitored the crystal growth kinetics of crystallization of a shear melted crystalline colloidal array (CCA). The fcc CCA heterogeneously nucleates at the flow cell wall surface. We examined the evolution of the (1 1 1) Bragg diffraction peak, and, for the first time, quantitatively monitored growth by measuring the temporal evolution of the Bragg diffraction interference fringes. Modeling of the evolution of the fringe patterns exposes the time dependence of the increasing crystal thickness. The initial diffusion-driven linear growth is followed by ripening-driven growth. Between 80 and 90 microM NaCl concentrations the fcc crystals first linearly grow at rates between 1.9 and 4.2 microm/s until they contact homogeneously nucleated crystals in the bulk. At lower salt concentrations interference fringes are not visible because the strong electrostatic interactions between particles result in high activation barriers, preventing defect annealing and leading to a lower crystal quality. The fcc crystals melt to a liquid phase at >90 microM NaCl concentrations. Increasing NaCl concentrations slow the fcc CCA growth rate consistent with the expectation of the classical Wilson-Frenkel growth theory. The final thickness of wall-nucleated CCA, that is determined by the competition between growth of heterogeneously and homogenously nucleated CCA, increases with higher NaCl concentrations. Copyright 2010 Elsevier Inc. All rights reserved.

Evolution in the lineament patterns associated to strong earthquakes revealed by satellite observations

NASA Astrophysics Data System (ADS)

Soto-Pinto, C. A.; Arellano-Baeza, A. A.; Ouzounov, D. P.

2011-12-01

We study the temporal evolution of the stress patterns in the crust by using high-resolution (10-300 m) satellite images from MODIS and ASTER satellite sensors. We are able to detect some changes in density and orientation of lineaments preceding earthquake events. A lineament is generally defined as a straight or a somewhat curved feature in the landscape visible in a satellite image as an aligned sequence of pixels of a contrasting intensity compared to the background. The system of lineaments extracted from the satellite images is not identical to the geological lineaments; nevertheless, it generally reflects the structure of the faults and fractures in the Earth's crust. Our analysis has shown that the system of lineaments is very dynamical, and the significant number of lineaments appeared approximately one month before an earthquake, while one month after the earthquake the lineament configuration returned to its initial state. These features were not observed in the test areas that are free of any seismic activity in that period (null hypothesis). We have designed a computational prototype capable to detect lineament evolution and to utilize both ASTER and MODIS satellite L1/L2. We will demonstrate the first successful test results for several Mw> 5 earthquakes in Chile, Peru, China, and California (USA).

Evolution of Capsaicinoids in Peter Pepper (Capsicum annuum var. annuum) During Fruit Ripening.

PubMed

Barbero, Gerardo F; de Aguiar, Ana C; Carrera, Ceferino; Olachea, Ángel; Ferreiro-González, Marta; Martínez, Julian; Palma, Miguel; Barroso, Carmelo G

2016-08-01

The evolution of individual and total contents of capsaicinoids present in Peter peppers (Capsicum annuum var. annuum) at different ripening stages has been studied. Plants were grown in a glasshouse and the new peppers were marked in a temporal space of ten days. The extraction of capsaicinoids was performed by ultrasound-assisted extraction with MeOH. The capsaicinoids nordihydrocapsaicin (n-DHC), capsaicin, dihydrocapsaicin, homocapsaicin, and homodihydrocapsaicin were analyzed by ultraperformance liquid chromatography (UHPLC)-fluorescence and identified by UHPLC-Q-ToF-MS. The results indicate that the total capsaicinoids increase in a linear manner from the first point of harvest at ten days (0.283 mg/g FW) up to 90 days, at which point they reach a concentration of 1.301 mg/g FW. The evolution as a percentage of the individual capsaicinoids showed the initial predominance of capsaicin, dihydrocapsaicin, and n-DHC. Dihydrocapsaicin was the major capsaicinoid up to day 50 of maturation. After 50 days, capsaicin became the major capsaicinoid as the concentration of dihydrocapsaicin fell slightly. The time of harvest of Peter pepper based on the total capsaicinoids content should be performed as late as possible. In any case, harvesting should be performed before overripening of the fruit is observed. © 2016 Wiley-VHCA AG, Zürich.

Temporal evolution of urate crystal deposition over articular cartilage after successful urate-lowering therapy in patients with gout: An ultrasonographic perspective.

PubMed

Das, Shyamashis; Goswami, Rudra Prosad; Ghosh, Alakendu; Ghosh, Parasar; Lahiri, Debasish; Basu, Kaushik

2017-05-01

To detect evolution of ultrasonographic signs of deposition of monosodium urate crystals (MSUC) in gouty joints by serial ultrasonography after initiation of urate-lowering therapy (ULT). Adult gout patients were examined by serial ultrasonography after initiation of ULT with target serum uric acid (SUA) < 6 mg/dL. Thirty-eight male patients with gout with mean age of 50 ± 11 years, median disease duration of 48 months and baseline mean SUA level of 8.8 ± 1.5 mg/dL were recruited. Ultrasonographic evidence of MSUC deposition was detected in 89.74% of first metatarsophalangeal (MTP) joints and 27.63% of knee joints. Double contour sign (DCS), tophi, and hyperechoic spots (HES) were detected in 77.63%, 43.42%, and 19.74% of first MTPs, respectively. SUA level normalizes and plateaus after fourth month of follow-up. DCS thickness reduced significantly throughout the follow-up period. Overall, 86.25% DCS and 100% HES disappeared with median time of 6 months and 5.7 months, respectively. SUA normalization was the only significant predictor of DCS disappearance. Serial ultrasonographic determination of DCS, tophi, or HES during hypouricemic therapy is a noninvasive, effective method to detect the lowering of burden of urate load in gouty joints.

Temporal evolution of the Roccamonfina volcanic complex (Pleistocene), Central Italy

NASA Astrophysics Data System (ADS)

Rouchon, V.; Gillot, P. Y.; Quidelleur, X.; Chiesa, S.; Floris, B.

2008-10-01

The Roccamonfina volcanic complex (RVC), in southern Italy, is an Early to Middle Pleistocene stratovolcano sharing temporal and morphological characteristics with the Somma-Vesuvius and the Alban Hills; both being associated with high volcanic hazard for the cities of Naples and Rome, respectively. The RVC is important for the understanding of volcanic evolution in the Roman and Campanian volcanic provinces. We report a comprehensive study of its evolution based on morphological, geochemical and K-Ar geochronological data. The RVC was active from c.a. 550 ka to 150 ka. Its evolution is divided into five stages, defining a volcanic pulse recurrence time of c.a. 90-100 kyr. The two initial stages, consisted in the construction of two successive stratovolcanoes of the tephrite-phonolite, namely "High-K series". The first stage was terminated by a major plinian eruption emplacing the trachytic Rio Rava pumices at 439 ± 9 ka. At the end of the second stage, the last High-K series stratovolcano was destroyed by a large sector collapse and the emplacement of the Brown Leucitic Tuff (BLT) at 353 ± 5 ka. The central caldera of the RVC is the result of the overlapping of the Rio Rava and of the BLT explosions. The plinian eruption of the BLT is related to the emptying of a stratified, deep-seated HKS magma chamber during the upwelling of K series (KS) magma, marking a major geochemical transition and plumbing system re-organization. The following stage was responsible for the emplacement of the Lower White Trachytic Tuff at 331 ± 2 ka, and of basaltic-trachytic effusive products erupted through the main vent. The subsequent activity was mainly restricted to the emplacement of basaltic-shoshonitic parasitic cones and lava flows, and of minor subplinian deposits of the Upper White Trachytic Tuff between 275 and 230 ka. The northern crater is most probably a maar that formed by the phreatomagmatic explosion of the Yellow Trachytic Tuff at 230 ka. The latest stage of activity featured the edification of the central shoshonitic domes at c.a. 150 ka.

Influence of Rainfall Product on Hydrological and Sediment Outputs when Calibrating the STREAP Rainfall Generator for the CAESAR-Lisflood Landscape Evolution Model

NASA Astrophysics Data System (ADS)

Skinner, Christopher; Peleg, Nadav; Quinn, Niall

2017-04-01

The use of Landscape Evolution Models often requires a timeseries of rainfall to drive the model. The spatial and temporal resolution of the driving data has an impact on several model outputs, including the shape of the landscape itself. Attempts to compensate for the spatiotemporal smoothing of local rainfall intensities are insufficient and may exacerbate these issues, meaning that to produce the best results the model needs to be run with data of highest spatial and temporal resolutions available. Some rainfall generators are able to produce timeseries with high spatial and temporal resolution. Observed data is used for the calibration of these generators. However, rainfall observations are highly uncertain and vary between different products (e.g. raingauges, weather radar) which may cascade through the Landscape Evolution Model. Here, we used the STREAP rainfall generator to produce high spatial (1km) and temporal (hourly) resolution ensembles of rainfall for a 50-year period, and used these to drive the CAESAR-Lisflood Landscape Evolution Model for a test catchment. Three different calibrations of STREAP were used against different products: gridded raingauge (TBR), weather radar (NIMROD), and a merged of the two. Analysis of the discharge and sediment yields from the model runs showed that the models run by STREAP calibrated by the different products were statistically significantly different, with the raingauge calibration producing 12.4 % more sediment on average over the 50-year period. The merged product produced results which were between the raingauge and radar products. The results demonstrate the importance of considering the selection of rainfall driving data on Landscape Evolution Modelling. Rainfall products are highly uncertain, different instruments will observe rainfall differently, and these uncertainties are clearly shown to cascade through the calibration of the rainfall generator and the Landscape Evolution Model. Merging raingauge and radar products is a common practise operationally, and by using features of both to calibrate the rainfall generator it is likely a more robust rainfall timeseries is produced.

Influence of Magnesium Content on the Local Structure of Amorphous Calcium Carbonate (ACC): Real Time Determination by In Situ PDF Analysis

NASA Astrophysics Data System (ADS)

Mergelsberg, S. T.; Ulrich, R. N.; Michel, F. M.; Dove, P. M.

2016-12-01

Calcium carbonate minerals are an essential component in the exoskeletons of crustaceans and mollusks. The onset of exoskeleton mineralization includes the precipitation of amorphous calcium carbonate (ACC) as a reactive intermediate that later transforms to produce diverse structures. Despite the importance of ACC as a critical phase during skeleton formation, the chemical and physical properties are not well characterized at conditions that approximate biological environments. Of particular interest are the solubility of ACC, the short-range structure at the time of formation, and the evolution of ACC structure to final products. Recent advances showing the widespread occurrence of multistep pathways to mineralization in biological and geological settings (De Yoreo et al., 2015) underline the importance of understanding amorphous intermediates. Using quantitative laboratory techniques developed by our research group (Blue et al., 2013; Blue and Dove, 2015; Blue et al., in press), this experimental study quantifies the solubility of ACC in parallel with the physical characterization of the corresponding structure. We measured ACC solubility at specific time points during the precipitation and during its subsequent evolution under the mild pH conditions that approximate biological and environmental conditions. In parallel experiments, structural data were collected from in situ pair distribution function (PDF) analyses were conducted to follow the evolution of individual samples from initial precipitation to final product. The measurements are leading to a quantitative solubility function for ACC with variable Mg contents and an x-ray based understanding of ACC structure in the same particles. We are also finding temporal changes in the short-range order of ACC after precipitation and this order is dependent upon Mg content. Moreover, the data show Mg distribution through the ACC particles is dependent upon total alkalinity. Insights from this study hold promise for better understanding the nature of the initial ACC that forms and factors that influence its structural evolution to final products.

The time course of saccadic decision making: dynamic field theory.

PubMed

Wilimzig, Claudia; Schneider, Stefan; Schöner, Gregor

2006-10-01

Making a saccadic eye movement involves two decisions, the decision to initiate the saccade and the selection of the visual target of the saccade. Here we provide a theoretical account for the time-courses of these two processes, whose instabilities are the basis of decision making. We show how the cross-over from spatial averaging for fast saccades to selection for slow saccades arises from the balance between excitatory and inhibitory processes. Initiating a saccade involves overcoming fixation, as can be observed in the countermanding paradigm, which we model accounting both for the temporal evolution of the suppression probability and its dependence on fixation activity. The interaction between the two forms of decision making is demonstrated by predicting how the cross-over from averaging to selection depends on the fixation stimulus in gap-step-overlap paradigms. We discuss how the activation dynamics of our model may be mapped onto neuronal structures including the motor map and the fixation cells in superior colliculus.

Spatial and Temporal Evolution of Earthquake Dynamics: Case Study of the Mw 8.3 Illapel Earthquake, Chile

NASA Astrophysics Data System (ADS)

Yin, Jiuxun; Denolle, Marine A.; Yao, Huajian

2018-01-01

We develop a methodology that combines compressive sensing backprojection (CS-BP) and source spectral analysis of teleseismic P waves to provide metrics relevant to earthquake dynamics of large events. We improve the CS-BP method by an autoadaptive source grid refinement as well as a reference source adjustment technique to gain better spatial and temporal resolution of the locations of the radiated bursts. We also use a two-step source spectral analysis based on (i) simple theoretical Green's functions that include depth phases and water reverberations and on (ii) empirical P wave Green's functions. Furthermore, we propose a source spectrogram methodology that provides the temporal evolution of dynamic parameters such as radiated energy and falloff rates. Bridging backprojection and spectrogram analysis provides a spatial and temporal evolution of these dynamic source parameters. We apply our technique to the recent 2015 Mw 8.3 megathrust Illapel earthquake (Chile). The results from both techniques are consistent and reveal a depth-varying seismic radiation that is also found in other megathrust earthquakes. The low-frequency content of the seismic radiation is located in the shallow part of the megathrust, propagating unilaterally from the hypocenter toward the trench while most of the high-frequency content comes from the downdip part of the fault. Interpretation of multiple rupture stages in the radiation is also supported by the temporal variations of radiated energy and falloff rates. Finally, we discuss the possible mechanisms, either from prestress, fault geometry, and/or frictional properties to explain our observables. Our methodology is an attempt to bridge kinematic observations with earthquake dynamics.

Modeling Global Spatial-Temporal Evolution of Society: Hyperbolic Growth and Historical Cycles

NASA Astrophysics Data System (ADS)

Kurkina, E. S.

2011-09-01

The global historical processes are under consideration; and laws of global evolution of the world community are studied. The world community is considered as a united complex self-developing and self-organizing system. It supposed that the main driving force of social-economical evolution was the positive feedback between the population size and the level of technological development, which was a cause of growth in blow-up regime both of population and of global economic indexes. The study is supported by the results of mathematical modeling founded on a nonlinear heat equation with a source. Every social-economical epoch characterizes by own specific spatial distributed structures. So the global dynamics of world community during the whole history is investigated throughout the prism of the developing of spatial-temporal structures. The model parameters have been chosen so that 1) total population follows stable hyperbolic growth, consistently with the demographic data; 2) the evolution of the World-System goes through 11 stages corresponding to the main historical epochs.

Dynamics of deformation and pinch-off of a migrating compound droplet in a tube

NASA Astrophysics Data System (ADS)

Borthakur, Manash Pratim; Biswas, Gautam; Bandyopadhyay, Dipankar

2018-04-01

A computational fluid dynamic investigation has been carried out to study the dynamics of a moving compound droplet inside a tube. The motions associated with such a droplet is uncovered by solving the axisymmetric Navier-Stokes equations in which the spatiotemporal evolution of a pair of twin-deformable interfaces has been tracked employing the volume-of-fluid approach. The deformations at the interfaces and their subsequent dynamics are found to be stimulated by the subtle interplay between the capillary and viscous forces. The simulations uncover that when a compound drop composed of concentric inner and outer interfaces migrates inside a tube, initially in the unsteady domain of evolution, the inner drop shifts away from the concentric position to reach a morphology of constant eccentricity at the steady state. The coupled motions of the droplets in the unsteady regime causes a continuous deformation of the inner and outer interfaces to obtain a configuration with a (an) prolate (oblate) shaped outer (inner) interface. The magnitudes of capillary number and viscosity ratio are found to have significant influence on the temporal evolution of the interfacial deformations as well as the eccentricity of the droplets. Further, the simulations uncover that, following the asymmetric deformation of the interfaces, the migrating compound droplet can undergo an uncommon breakup stimulated by a rather irregular pinch-off of the outer shell. The breakup is found to initiate with the thinning of the outer shell followed by the pinch-off. Interestingly, the kinetics of the thinning of outer shell is found to follow two distinct power-law regimes—a swiftly thinning stage at the onset followed by a rate limiting stage before pinch-off, which eventually leads to the uncommon breakup of the migrating compound droplets.

Sequence stratigraphy, tectonics and hydrocarbon trap geometries of Middle Tertiary strata in the southern San Joaquin Basin, California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Phillips, S.; Hewlett, J.S.; Bazeley, W.J.M.

1996-01-01

Tectonic evolution of the southern San Joaquin basin exerted a fundamental control on Cenozoic sequence boundary development, reservoir, source and seal facies distribution, and hydrocarbon trap development. Spatial and temporal variations in Tertiary sequence architecture across the basin reflect differences in eastside versus westside basin-margin geometries and deformation histories. Deposition of Tertiary sequences initiated in a forearc basin setting, bounded on the east by a ramp-margin adjacent to the eroded Sierran arc complex and on the west by the imbricated accretionary wedge of the Coast Ranges thrust. The major stages of Cenozoic basin evolution are: (1) Episodic compressional folding andmore » thrusting associated with oblique convergence of the Farallon and North American plates (Late Cretaceous to Oligocene), (2) localized folding and onset of basin subsidence related to Pacific Plate reorganization, microplate formation and rotation (Oligocene to Early Miocene), (3) transtensional faulting, folding basin subsidence associated with initiation of the San Andreas transform and continued microplate rotation (Micocene to Pliocene), and (4) compressional folding, extensional and strike- slip faulting related to evolution of the Pacific-North American transform boundary (Plio- Pleistocene). Complex stratigraphic relationships within Eocene to Middle Miocene rocks provide examples of tectonic influences on sequence architecture. These include development of: (1) Tectonically enhanced sequence boundaries (Early Eocene base Domengine unconformity) and local mid-sequence angular unconformities, (2) westside-derived syntectonic [open quotes]lowstand[close quotes] systems (Yokut/Turitella Silt wedge and Leda Sand/Cymric/Salt Creek wedge), (3) regional seals associated with subsidence-related transgressions (Round Mountain Silt), and (4) combination traps formed by structural inversion of distal lowstand delta reservoirs (e.g. Coalinga East Extension field).« less

Sequence stratigraphy, tectonics and hydrocarbon trap geometries of Middle Tertiary strata in the southern San Joaquin Basin, California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Phillips, S.; Hewlett, J.S.; Bazeley, W.J.M.

1996-12-31

Tectonic evolution of the southern San Joaquin basin exerted a fundamental control on Cenozoic sequence boundary development, reservoir, source and seal facies distribution, and hydrocarbon trap development. Spatial and temporal variations in Tertiary sequence architecture across the basin reflect differences in eastside versus westside basin-margin geometries and deformation histories. Deposition of Tertiary sequences initiated in a forearc basin setting, bounded on the east by a ramp-margin adjacent to the eroded Sierran arc complex and on the west by the imbricated accretionary wedge of the Coast Ranges thrust. The major stages of Cenozoic basin evolution are: (1) Episodic compressional folding andmore » thrusting associated with oblique convergence of the Farallon and North American plates (Late Cretaceous to Oligocene), (2) localized folding and onset of basin subsidence related to Pacific Plate reorganization, microplate formation and rotation (Oligocene to Early Miocene), (3) transtensional faulting, folding basin subsidence associated with initiation of the San Andreas transform and continued microplate rotation (Micocene to Pliocene), and (4) compressional folding, extensional and strike- slip faulting related to evolution of the Pacific-North American transform boundary (Plio- Pleistocene). Complex stratigraphic relationships within Eocene to Middle Miocene rocks provide examples of tectonic influences on sequence architecture. These include development of: (1) Tectonically enhanced sequence boundaries (Early Eocene base Domengine unconformity) and local mid-sequence angular unconformities, (2) westside-derived syntectonic {open_quotes}lowstand{close_quotes} systems (Yokut/Turitella Silt wedge and Leda Sand/Cymric/Salt Creek wedge), (3) regional seals associated with subsidence-related transgressions (Round Mountain Silt), and (4) combination traps formed by structural inversion of distal lowstand delta reservoirs (e.g. Coalinga East Extension field).« less

ARM Support for the Plains Elevated Convection at Night (AS-PECAN) Field Campaign Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Turner, D. D.; Geerts, B.

The Plains Elevated Convection at Night (PECAN) field campaign was a large multi-agency/multi-institutional experiment that targeted nighttime convection events in the central plains of the United States in order to better understand a range of processes that lead to the initiation and upscale growth of deep convection. Both weather and climate models struggle to properly represent the timing and intensity of precipitation in the central United States in their simulations. These models must be able to represent the interactions between the nocturnal stable boundary layer (SBL), the nocturnal low-level jet (LLJ), and a reservoir of convectively available potential energy (CAPE)more » that frequently exists above the SBL. Furthermore, a large fraction of the nocturnal precipitation is due to the organization of mesoscale convective systems (MCSs). In particular, there were four research foci for the PECAN campaign: •The initiation of elevated nocturnal convection focus seeks to elucidate the mesoscaleenvironmental characteristics and processes that lead to convection initiation (CI) and provide baseline data on the early evolution of mesoscale convective clusters. •The dynamics and internal structure and microphysics of nocturnal MCSs focus will investigatethe transition from surface-based to elevated storm structure, the interaction of cold pools generated by MCSs with the nocturnal stable boundary layer, and how the organization and evolution of elevated convection is influenced by the SBL and the vertical profile of wind and stability above the LLJ. •The bores and wave-like disturbances focus seeks to advance knowledge of the initiation of boredisturbances by convection, how the vertical profile of stability and winds modulate bore structure, the role of these disturbances in the initiation, maintenance, and organization of deep convection, and their impact on the LLJ and SBL. •The LLJ focus seeks to understand the processes that influence the spatial and temporal evolutionof the LLJ, how it affects the SBL, and the interaction between the LLJ and atmospheric boundaries in the development of CI.« less

Application of Dynamic Mode Decomposition: Temporal Evolution of Flow Structures in an Aneurysm

NASA Astrophysics Data System (ADS)

Conlin, William; Yu, Paulo; Durgesh, Vibhav

2017-11-01

An aneurysm is an enlargement of a weakened arterial wall that can be fatal or debilitating on rupture. Aneurysm hemodynamics is integral to developing an understanding of aneurysm formation, growth, and rupture. The flow in an aneurysm exhibits complex fluid dynamics behavior due to an inherent unsteady inflow condition and its interactions with large-scale flow structures present in the aneurysm. The objective of this study is to identify the large-scale structures in the aneurysm, study temporal behavior, and quantify their interaction with the inflow condition. For this purpose, detailed Particle Image Velocimetry (PIV) measurements were performed at the center plane of an idealized aneurysm model for a range of inflow conditions. Inflow conditions were precisely controlled using a ViVitro SuperPump system. Dynamic Modal Decomposition (DMD) of the velocity field was used to identify coherent structures and their temporal behavior. DMD was successful in capturing the large-scale flow structures and their temporal behavior. A low dimensional approximation to the flow field was obtained with the most relevant dynamic modes and was used to obtain temporal information about the coherent structures and their interaction with the inflow, formation, evolution, and growth.

Application of Lidar Data to the Performance Evaluations of CMAQ Model

EPA Science Inventory

The Tropospheric Ozone (O3) Lidar Network (TOLNet) provides time/height O3 measurements from near the surface to the top of the troposphere to describe in high-fidelity spatial-temporal distributions, which is uniquely useful to evaluate the temporal evolution of O3 profiles in a...

Transport of particulate matter from a shocked interface

NASA Astrophysics Data System (ADS)

Buttler, W. T.; Hammerberg, J. E.; Oro, D.; Morris, C.; Mariam, F.; Rousculp, C.

2011-03-01

We have performed a series of shock experiments to measure the evolution and transport of micron and sub-micron Tungsten particles from a 40 micron thick layer deposited on an Aluminum substrate. Densities and velocity distributions were measured using proton radiography at the Los Alamos Neutron Science Center for vacuum conditions and with contained Argon and Xenon gas atmospheres at initial pressures of 9.5 bar and room temperature. A common shock drive resulted in free surface velocities of 1.25 km/s. An analysis of the time dependence of Lithium Niobate piezo-electric pin pressure profiles is given in terms of solutions to the particulate drag equations and the evolution equation for the particulate distribution function. The spatial and temporal fore-shortening in the shocked gas can be accounted for using reasonable values for the compressed gas shear viscosities and the vacuum distributions. The detailed form of the pin pressure data for Xenon indicates particulate breakup in the hot compressed gas. This work supported by the U.S. Department of Energy under contract DE-AC52-06NA25396.

Transport of Particulate Matter from a Shocked Interface

NASA Astrophysics Data System (ADS)

Buttler, W. T.; Hammerberg, J. E.; Oro, D.; Mariam, F.; Rousculp, C.

2011-06-01

We have performed a series of shock experiments to measure the evolution and transport of micron and sub-micron Tungsten particles from a 40 μm thick layer deposited on an Aluminum substrate. Densities and velocity distributions were measured using proton radiography at the Los Alamos Neutron Science Center for vacuum conditions and with contained Argon and Xenon gas atmospheres at initial pressures of 9.5 bar and room temperature. A common shock drive resulted in free surface velocities of 1.25 km/s. An analysis of the time dependence of Lithium Niobate piezo-electric pin pressure profiles is given in terms of solutions to the particulate drag equations and the evolution equation for the particulate distribution function. The spatial and temporal fore-shortening in the shocked gas can be accounted for using reasonable values for the compressed gas shear viscosities and the vacuum distributions. The detailed form of the pin pressure data for Xenon indicates particulate breakup in the hot compressed gas. This work supported by the U.S. Department of Energy under contract DE-AC52-06NA25396.

The Substorm Current Wedge Revisited

NASA Astrophysics Data System (ADS)

Kepko, Larry; McPherron, Robert; Apatenkov, Sergey; Baumjohann, Wolfgang; Birn, Joachim; Lester, Mark; Nakamura, Rumi; Pulkkinen, Tuija; Sergeev, Victor

2015-04-01

Almost 40 years ago the concept of the substorm current wedge was developed to explain the magnetic signatures observed on the ground and in geosynchronous orbit during substorm expansion. In the ensuing decades new observations, including radar and low-altitude spacecraft, MHD simulations, and theoretical considerations have tremendously advanced our understanding of this system. The AMPTE/IRM, THEMIS and Cluster missions have added considerable observational knowledge, especially on the important role of fast flows in producing the stresses that generate the substorm current wedge. Recent detailed, multi-spacecraft, multi-instrument observations both in the magnetosphere and in the ionosphere have brought a wealth of new information about the details of the temporal evolution and structure of the current system. In this paper, we briefly review recent in situ and ground-based observations and theoretical work that have demonstrated a need for an update of the original picture. We present a revised, time-dependent picture of the substorm current wedge that follows its evolution from the initial substorm flows through substorm expansion and recovery, and conclude by identifying open questions.

Sublimation as a landform-shaping process on Pluto

NASA Astrophysics Data System (ADS)

Moore, Jeffrey M.; Howard, Alan D.; Umurhan, Orkan M.; White, Oliver L.; Schenk, Paul M.; Beyer, Ross A.; McKinnon, William B.; Spencer, John R.; Grundy, Will M.; Lauer, Tod R.; Nimmo, Francis; Young, Leslie A.; Stern, S. Alan; Weaver, Harold A.; Olkin, Cathy B.; Ennico, Kimberly; New Horizons Science Team

2017-05-01

Fields of pits, both large and small, in Tombaugh Regio (Sputnik Planitia, and the Pitted Uplands to the east), and along the scarp of Piri Rupes, are examples of landscapes on Pluto where we conclude that sublimation drives their formation and evolution. Our heuristic modeling closely mimics the form, spacing, and arrangement of a variety of Tombaugh Regio's pits. Pluto's sublimation modified landforms appear to require a significant role for (diffusive) mass wasting as suggested by our modeling. In our models, the temporal evolution of pitted surfaces is such that initially lots of time passes with little happening, then eventually, very rapid development of relief and rapid sublimation. Small pits on Sputnik Planitia are consistent with their formation in N2-dominated materials. As N2-ice readily flows, some other ``stiffer'' volatile ice may play a role in supporting the relief of sublimation degraded landforms that exhibit several hundred meters of relief. A strong candidate is CH4, which is spectroscopically observed to be associated with these features, but the current state of rheological knowledge for CH4 ice at Pluto conditions is insufficient for a firm assessment.

The Effect of Strain Rate on the Evolution of Plane Wakes Subjected to Irrotational Strains

NASA Technical Reports Server (NTRS)

Rogers, Michael M.; Merriam, Marshal (Technical Monitor)

1996-01-01

Direct numerical simulations of time-evolving turbulent plane wakes developing in the presence of irrotational plane strain applied at three different strain rates have been generated. The strain geometry is such that the flow is compressed in the streamwise direction and expanded in the cross-stream direction with the spanwise direction being unstrained. This geometry is the temporally evolving analogue of a spatially evolving wake in an adverse pressure gradient. A pseudospectral numerical method with up to 16 million modes is used to solve the equations in a reference frame moving with the irrotational strain. The initial condition for each simulation is taken from a previous turbulent self-similar plane wake direct numerical simulation at a velocity deficit Reynolds number, Re, of about 2,000. Although the evolutions of many statistics are nearly collapsed when plotted against total strain, there are some differences owing to the different strain rate histories. The impact of strain-rate on the wake spreading rate, the peak velocity deficit, the Reynolds stress profiles, and the flow structure is examined.

Simulation of the fine structure of the 12 July 1996 Stratosphere-Troposphere Experiment: Radiation, Aerosols and Ozone (STERAO-A) storm accounting for effects of terrain and interaction with mesoscale flow

NASA Astrophysics Data System (ADS)

Stenchikov, Georgiy; Pickering, Kenneth; Decaria, Alex; Tao, W.-K.; Scala, John; Ott, Lesley; Bartels, Diana; Matejka, Thomas

2005-07-01

Vertical mixing of chemical tracers and optically active constituents by deep convection affects regional and global chemical balances in the troposphere and lower stratosphere. This important process is not explicitly resolved in global and regional models and has to be parameterized. However, mixing depends strongly on the spatial structure, strength, and temporal evolution of the particular storm, complicating parameterization of this important effect in the large-scale models. To better quantify dynamic fields and associated mixing processes, we simulate a thunderstorm observed on 12 July 1996 during the STERAO-A (Stratosphere-Troposphere Experiment: Radiation, Aerosols, and Ozone) Deep Convection field project using the Goddard Cloud Ensemble (GCE) model. The 12 July STERAO-A storm had very complex temporal and spatial structure. The meteorological environment and evolution of the storm were significantly different than those of the 10 July STERAO-A storm extensively discussed in previous studies. Our 2-D and 3-D GCE model runs with uniform one-sounding initialization were unable to reproduce the full life cycle of the 12 July storm observed by the CHILL radar system. To describe the storm evolution, we modified the 3-D GCE model to include the effects of terrain and the capability of using nonuniform initial fields. We conducted a series of numerical experiments and reproduced the observed life cycle and fine spatial structure of the storm. The main characteristics of the 3-D simulation of the 12 July storm were compared with observations, with 2-D simulations of the same storm, and with the evolution of the 10 July storm. The simulated 3-D convection appears to be stronger and more realistic than in our 2-D simulations. Having developed in a less unstable environment than the 10 July 1996 STERAO-A storm, our simulation of the 12 July storm produced weaker but sustainable convection that was significantly fed by wind shear instability in the lower troposphere. The time evolution, direction, and speed of propagation of the storm were determined by interaction with the nonuniform background mesoscale flow. For example, storm intensity decreased drastically when the storm left the region with large convective available potential energy. The model appears to be successful in reproducing the rectangular four-cell structure of the convection. The distributions of convergence, vertical vorticity, and position of the inflow level in the later single-cell regime compare favorably with the airborne Doppler radar observations. This analysis allowed us to better understand the role of terrain and mesoscale circulation in the development of a midlatitude deep convective system and associated convective mixing. Wind, temperature, hydrometeor, and turbulent diffusion coefficient data from the cloud model simulations were provided for off-line 3-D cloud-scale chemical transport simulations discussed in the companion paper by DeCaria et al. (2005).

Time dependent wettability of graphite upon ambient exposure: The role of water adsorption

NASA Astrophysics Data System (ADS)

Amadei, Carlo A.; Lai, Chia-Yun; Heskes, Daan; Chiesa, Matteo

2014-08-01

We report the temporal evolution of the wettability of highly ordered pyrolytic graphite (HOPG) exposed to environmental conditions. Macroscopic wettability is investigated by static and dynamic contact angles (SCA and DCA) obtaining values comparable to the ones presented in the literature. SCA increases from ˜68° to ˜90° during the first hour of exposure after cleaving, whereas DCA is characterized by longer-scale (24 h) time evolution. We interpret these results in light of Fourier transform infrared spectroscopy, which indicates that the evolution of the HOPG wettability is due to adsorption of molecules from the surrounding atmosphere. This hypothesis is further confirmed by nanoscopic observations obtained by atomic force microscope (AFM)-based force spectroscopy, which monitor the evolution of surface properties with a spatial resolution superior to macroscopic experiments. Moreover, we observe that the results of macro- and nanoscale measurements evolve in similar fashion with time and we propose a quantitative correlation between SCA and AFM measurements. Our results suggest that the cause of the transition in the wettability of HOPG is due to the adsorption of hydrocarbon contaminations and water molecules from the environment. This is corroborated by annealing the HOPG is vacuum conditions at 150°, allowing the desorption of molecules on the surface, and thus re-establishing the initial macro and nano surface properties. Our findings can be used in the interpretation of the wettability of more complicated systems derived from HOPG (i.e., graphene).

Evolution of scaling emergence in large-scale spatial epidemic spreading.

PubMed

Wang, Lin; Li, Xiang; Zhang, Yi-Qing; Zhang, Yan; Zhang, Kan

2011-01-01

Zipf's law and Heaps' law are two representatives of the scaling concepts, which play a significant role in the study of complexity science. The coexistence of the Zipf's law and the Heaps' law motivates different understandings on the dependence between these two scalings, which has still hardly been clarified. In this article, we observe an evolution process of the scalings: the Zipf's law and the Heaps' law are naturally shaped to coexist at the initial time, while the crossover comes with the emergence of their inconsistency at the larger time before reaching a stable state, where the Heaps' law still exists with the disappearance of strict Zipf's law. Such findings are illustrated with a scenario of large-scale spatial epidemic spreading, and the empirical results of pandemic disease support a universal analysis of the relation between the two laws regardless of the biological details of disease. Employing the United States domestic air transportation and demographic data to construct a metapopulation model for simulating the pandemic spread at the U.S. country level, we uncover that the broad heterogeneity of the infrastructure plays a key role in the evolution of scaling emergence. The analyses of large-scale spatial epidemic spreading help understand the temporal evolution of scalings, indicating the coexistence of the Zipf's law and the Heaps' law depends on the collective dynamics of epidemic processes, and the heterogeneity of epidemic spread indicates the significance of performing targeted containment strategies at the early time of a pandemic disease.

EG-07CELL CYCLE SIGNATURE AND TUMOR PHYLOGENY ARE ENCODED IN THE EVOLUTIONARY DYNAMICS OF DNA METHYLATION IN GLIOMA

PubMed Central

Mazor, Tali; Pankov, Aleksandr; Johnson, Brett E.; Hong, Chibo; Bell, Robert J.A.; Smirnov, Ivan V.; Reis, Gerald F.; Phillips, Joanna J.; Barnes, Michael; Bollen, Andrew W.; Taylor, Barry S.; Molinaro, Annette M.; Olshen, Adam B.; Song, Jun S.; Berger, Mitchel S.; Chang, Susan M.; Costello, Joseph F.

2014-01-01

The clonal evolution of tumor cell populations can be reconstructed from patterns of genetic alterations. In contrast, tumor epigenetic states, including DNA methylation, are reversible and sensitive to the tumor microenvironment, presumably precluding the use of epigenetics to discover tumor phylogeny. Here we examined the spatial and temporal dynamics of DNA methylation in a clinically and genetically characterized cohort of IDH1-mutant low-grade gliomas and their patient-matched recurrences. WHO grade II gliomas are diffuse, infiltrative tumors that frequently recur and may undergo malignant progression to a higher grade with a worse prognosis. The extent to which epigenetic alterations contribute to the evolution of low-grade gliomas, including malignant progression, is unknown. While all gliomas in the cohort exhibited the hypermethylation signature associated with IDH1 mutation, low-grade gliomas that underwent malignant progression to high-grade glioblastoma (GBM) had a unique signature of DNA hypomethylation enriched for active enhancers, as well as sites of age-related hypermethylation in the brain. Genes with promoter hypomethylation and concordant transcriptional upregulation during evolution to GBM were enriched in cell cycle function, evolving in concert with genetic alterations that deregulate the G1/S cell cycle checkpoint. Despite the plasticity of tumor epigenetic states, phyloepigenetic trees robustly recapitulated phylogenetic trees derived from somatic mutations in the same patients. These findings highlight widespread co-dependency of genetic and epigenetic events throughout the clonal evolution of initial and recurrent glioma.

Evidence for Precursors of the Coronal Hole Jets in Solar Bright Points

NASA Astrophysics Data System (ADS)

Bagashvili, Salome R.; Shergelashvili, Bidzina M.; Japaridze, Darejan R.; Kukhianidze, Vasil; Poedts, Stefaan; Zaqarashvili, Teimuraz V.; Khodachenko, Maxim L.; De Causmaecker, Patrick

2018-03-01

A set of 23 observations of coronal jet events that occurred in coronal bright points has been analyzed. The focus was on the temporal evolution of the mean brightness before and during coronal jet events. In the absolute majority of the cases either single or recurrent coronal jets (CJs) were preceded by slight precursor disturbances observed in the mean intensity curves. The key conclusion is that we were able to detect quasi-periodical oscillations with characteristic periods from sub-minute up to 3–4 minute values in the bright point brightness that precedes the jets. Our basic claim is that along with the conventionally accepted scenario of bright-point evolution through new magnetic flux emergence and its reconnection with the initial structure of the bright point and the coronal hole, certain magnetohydrodynamic (MHD) oscillatory and wavelike motions can be excited and these can take an important place in the observed dynamics. These quasi-oscillatory phenomena might play the role of links between different epochs of the coronal jet ignition and evolution. They can be an indication of the MHD wave excitation processes due to the system entropy variations, density variations, or shear flows. It is very likely a sharp outflow velocity transverse gradients at the edges between the open and closed field line regions. We suppose that magnetic reconnections can be the source of MHD waves due to impulsive generation or rapid temperature variations, and shear flow driven nonmodel MHD wave evolution (self-heating and/or overreflection mechanisms).

Time dependent wettability of graphite upon ambient exposure: The role of water adsorption

DOE Office of Scientific and Technical Information (OSTI.GOV)

Amadei, Carlo A.; Lai, Chia-Yun; Heskes, Daan

We report the temporal evolution of the wettability of highly ordered pyrolytic graphite (HOPG) exposed to environmental conditions. Macroscopic wettability is investigated by static and dynamic contact angles (SCA and DCA) obtaining values comparable to the ones presented in the literature. SCA increases from ∼68° to ∼90° during the first hour of exposure after cleaving, whereas DCA is characterized by longer-scale (24 h) time evolution. We interpret these results in light of Fourier transform infrared spectroscopy, which indicates that the evolution of the HOPG wettability is due to adsorption of molecules from the surrounding atmosphere. This hypothesis is further confirmedmore » by nanoscopic observations obtained by atomic force microscope (AFM)-based force spectroscopy, which monitor the evolution of surface properties with a spatial resolution superior to macroscopic experiments. Moreover, we observe that the results of macro- and nanoscale measurements evolve in similar fashion with time and we propose a quantitative correlation between SCA and AFM measurements. Our results suggest that the cause of the transition in the wettability of HOPG is due to the adsorption of hydrocarbon contaminations and water molecules from the environment. This is corroborated by annealing the HOPG is vacuum conditions at 150°, allowing the desorption of molecules on the surface, and thus re-establishing the initial macro and nano surface properties. Our findings can be used in the interpretation of the wettability of more complicated systems derived from HOPG (i.e., graphene)« less

The unfolding of the historical style in modern cosmology: Emergence, evolution, entrenchment

NASA Astrophysics Data System (ADS)

Pearce, Jacob

2017-02-01

This paper traces the emergence, evolution and subsequent entrenchment of the historical style in the shifting scene of modern cosmological inquiry. It argues that the historical style in cosmology was forged in the early decades of the 20th century and continued to evolve in the century that followed. Over time, the scene of cosmological inquiry has gradually become dominated and entirely constituted by historicist explanations. Practices such as forwards and backwards temporal extrapolation (thinking about the past evolutionary history of the universe with different initial conditions and other parameters) are now commonplace. The non-static geometrization of the cosmos in the early 20th century led to inquires thinking about the cosmos in evolutionary terms. Drawing on the historical approach of Gamow (and contrasting this with the ahistorical approach of Bondi), the paper then argues that the historical style became a major force as inquirers began scouring the universe for fossils and other relics as a new form of scientific practice-cosmic palaeontology. By the 1970s the historical style became the bedrock of the discipline and the presupposition of new lines of inquiry. By the end of the 20th century, the historical style was pushed to its very limits as temporal reasoning began to occur beyond a linear historical narrative. With the atemporal 'ensemble' type multiverse proposals, a certain type of ahistorical reasoning has been reintroduced to cosmological discourse, which, in a sense, represents a radical de-historicization of the historical style in cosmology. Some are now even attempting to explain the laws of physics in terms of their historicity.

Trophic State Evolution and Nutrient Trapping Capacity in a Transboundary Subtropical Reservoir: A 25-Year Study

NASA Astrophysics Data System (ADS)

Cunha, Davi Gasparini Fernandes; Benassi, Simone Frederigi; de Falco, Patrícia Bortoletto; do Carmo Calijuri, Maria

2016-03-01

Artificial reservoirs have been used for drinking water supply, other human activities, flood control and pollution abatement worldwide, providing overall benefits to downstream water quality. Most reservoirs in Brazil were built during the 1970s, but their long-term patterns of trophic status, water chemistry, and nutrient removal are still not very well characterized. We aimed to evaluate water quality time series (1985-2010) data from the riverine and lacustrine zones of the transboundary Itaipu Reservoir (Brazil/Paraguay). We examined total phosphorus and nitrogen, chlorophyll a concentrations, water transparency, and phytoplankton density to look for spatial and temporal trends and correlations with trophic state evolution and nutrient retention. There was significant temporal and spatial water quality variation ( P < 0.01, ANCOVA). The results indicated that the water quality and structure of the reservoir were mainly affected by one internal force (hydrodynamics) and one external force (upstream cascading reservoirs). Nutrient and chlorophyll a concentrations tended to be lower in the lacustrine zone and decreased over the 25-year timeframe. Reservoir operational features seemed to be limiting primary production and phytoplankton development, which exhibited a maximum density of 6050 org/mL. The relatively small nutrient concentrations in the riverine zone were probably related to the effect of the cascade reservoirs upstream of Itaipu and led to relatively low removal percentages. Our study suggested that water quality problems may be more pronounced immediately after the filling phase of the artificial reservoirs, associated with the initial decomposition of drowned vegetation at the very beginning of reservoir operation.

Trophic State Evolution and Nutrient Trapping Capacity in a Transboundary Subtropical Reservoir: A 25-Year Study.

PubMed

Cunha, Davi Gasparini Fernandes; Benassi, Simone Frederigi; de Falco, Patrícia Bortoletto; Calijuri, Maria do Carmo

2016-03-01

Artificial reservoirs have been used for drinking water supply, other human activities, flood control and pollution abatement worldwide, providing overall benefits to downstream water quality. Most reservoirs in Brazil were built during the 1970s, but their long-term patterns of trophic status, water chemistry, and nutrient removal are still not very well characterized. We aimed to evaluate water quality time series (1985-2010) data from the riverine and lacustrine zones of the transboundary Itaipu Reservoir (Brazil/Paraguay). We examined total phosphorus and nitrogen, chlorophyll a concentrations, water transparency, and phytoplankton density to look for spatial and temporal trends and correlations with trophic state evolution and nutrient retention. There was significant temporal and spatial water quality variation (P < 0.01, ANCOVA). The results indicated that the water quality and structure of the reservoir were mainly affected by one internal force (hydrodynamics) and one external force (upstream cascading reservoirs). Nutrient and chlorophyll a concentrations tended to be lower in the lacustrine zone and decreased over the 25-year timeframe. Reservoir operational features seemed to be limiting primary production and phytoplankton development, which exhibited a maximum density of 6050  org/mL. The relatively small nutrient concentrations in the riverine zone were probably related to the effect of the cascade reservoirs upstream of Itaipu and led to relatively low removal percentages. Our study suggested that water quality problems may be more pronounced immediately after the filling phase of the artificial reservoirs, associated with the initial decomposition of drowned vegetation at the very beginning of reservoir operation.

OCT-based approach to local relaxations discrimination from translational relaxation motions

NASA Astrophysics Data System (ADS)

Matveev, Lev A.; Matveyev, Alexandr L.; Gubarkova, Ekaterina V.; Gelikonov, Grigory V.; Sirotkina, Marina A.; Kiseleva, Elena B.; Gelikonov, Valentin M.; Gladkova, Natalia D.; Vitkin, Alex; Zaitsev, Vladimir Y.

2016-04-01

Multimodal optical coherence tomography (OCT) is an emerging tool for tissue state characterization. Optical coherence elastography (OCE) is an approach to mapping mechanical properties of tissue based on OCT. One of challenging problems in OCE is elimination of the influence of residual local tissue relaxation that complicates obtaining information on elastic properties of the tissue. Alternatively, parameters of local relaxation itself can be used as an additional informative characteristic for distinguishing the tissue in normal and pathological states over the OCT image area. Here we briefly present an OCT-based approach to evaluation of local relaxation processes in the tissue bulk after sudden unloading of its initial pre-compression. For extracting the local relaxation rate we evaluate temporal dependence of local strains that are mapped using our recently developed hybrid phase resolved/displacement-tracking (HPRDT) approach. This approach allows one to subtract the contribution of global displacements of scatterers in OCT scans and separate the temporal evolution of local strains. Using a sample excised from of a coronary arteria, we demonstrate that the observed relaxation of local strains can be reasonably fitted by an exponential law, which opens the possibility to characterize the tissue by a single relaxation time. The estimated local relaxation times are assumed to be related to local biologically-relevant processes inside the tissue, such as diffusion, leaking/draining of the fluids, local folding/unfolding of the fibers, etc. In general, studies of evolution of such features can provide new metrics for biologically-relevant changes in tissue, e.g., in the problems of treatment monitoring.

Structural and functional changes during epileptogenesis in the mouse model of medial temporal lobe epilepsy.

PubMed

Dietrich, Yvan; Eliat, Pierre-Antoine; Dieuset, Gabriel; Saint-Jalmes, Herve; Pineau, Charles; Wendling, Fabrice; Martin, Benoit

2016-08-01

An important issue in epilepsy research is to understand the structural and functional modifications leading to chronic epilepsy, characterized by spontaneous recurrent seizures, after initial brain insult. To address this issue, we recorded and analyzed electroencephalography (EEG) and quantitative magnetic resonance imaging (MRI) data during epileptogenesis in the in vivo mouse model of Medial Temporal Lobe Epilepsy (MTLE, kainate). Besides, this model of epilepsy is a particular form of drug-resistant epilepsy. The results indicate that high-field (4.7T) MRI parameters (T2-weighted; T2-quantitative) allow to detect the gradual neuro-anatomical changes that occur during epileptogenesis while electrophysiological parameters (number and duration of Hippocampal Paroxysmal Discharges) allow to assess the dysfunctional changes through the quantification of epileptiform activity. We found a strong correlation between EEG-based markers (invasive recording) and MRI-based parameters (non-invasive) periodically computed over the `latent period' that spans over two weeks, on average. These results indicated that both structural and functional changes occur in the considered epilepsy model and are considered as biomarkers of the installation of epilepsy. Additionally, such structural and functional changes can also be observed in human temporal lobe epilepsy. Interestingly, MRI imaging parameters could be used to track early (day-7) structural changes (gliosis, cell loss) in the lesioned brain and to quantify the evolution of epileptogenesis after traumatic brain injury.

Influence of temporal pressure constraint on the biomechanical organization of gait initiation made with or without an obstacle to clear.

PubMed

Yiou, Eric; Fourcade, Paul; Artico, Romain; Caderby, Teddy

2016-06-01

Many daily motor tasks have to be performed under a temporal pressure constraint. This study aimed to explore the influence of such constraint on motor performance and postural stability during gait initiation. Young healthy participants initiated gait at maximal velocity under two conditions of temporal pressure: in the low-pressure condition, gait was self-initiated (self-initiated condition, SI); in the high-pressure condition, it was initiated as soon as possible after an acoustic signal (reaction-time condition, RT). Gait was initiated with and without an environmental constraint in the form of an obstacle to be cleared placed in front of participants. Results showed that the duration of postural adjustments preceding swing heel-off ("anticipatory postural adjustments", APAs) was shorter, while their amplitude was larger in RT compared to SI. These larger APAs allowed the participants to reach equivalent postural stability and motor performance in both RT and SI. In addition, the duration of the execution phase of gait initiation increased greatly in the condition with an obstacle to be cleared (OBST) compared to the condition without an obstacle (NO OBST), thereby increasing lateral instability and thus involving larger mediolateral APA. Similar effects of temporal pressure were obtained in NO OBST and OBST. This study shows the adaptability of the postural system to temporal pressure in healthy young adults initiating gait. The outcome of this study may provide a basis for better understanding the aetiology of balance impairments with the risk of falling in frail populations while performing daily complex tasks involving a whole-body progression.

Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leekitcharoenphon, Pimlapas; Hendriksen, Rene S.; Le Hello, Simon

It has been 30 years since the initial emergence and subsequent rapid global spread of multidrug-resistant Salmonella enterica serovar Typhimurium DT104 (MDR DT104). Nonetheless, its origin and transmission route have never been revealed. In this paper, we used whole-genome sequencing (WGS) and temporally structured sequence analysis within a Bayesian framework to reconstruct temporal and spatial phylogenetic trees and estimate the rates of mutation and divergence times of 315 S. Typhimurium DT104 isolates sampled from 1969 to 2012 from 21 countries on six continents. DT104 was estimated to have emerged initially as antimicrobial susceptible in ~1948 (95% credible interval [CI], 1934more » to 1962) and later became MDR DT104 in ~1972 (95% CI, 1972 to 1988) through horizontal transfer of the 13-kb Salmonella genomic island 1 (SGI1) MDR region into susceptible strains already containing SGI1. This was followed by multiple transmission events, initially from central Europe and later between several European countries. An independent transmission to the United States and another to Japan occurred, and from there MDR DT104 was probably transmitted to Taiwan and Canada. An independent acquisition of resistance genes took place in Thailand in ~1975 (95% CI, 1975 to 1990). In Denmark, WGS analysis provided evidence for transmission of the organism between herds of animals. Interestingly, the demographic history of Danish MDR DT104 provided evidence for the success of the program to eradicate Salmonella from pig herds in Denmark from 1996 to 2000. Finally, the results from this study refute several hypotheses on the evolution of DT104 and suggest that WGS may be useful in monitoring emerging clones and devising strategies for prevention of Salmonella infections.« less

Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104

PubMed Central

Hendriksen, Rene S.; Le Hello, Simon; Weill, François-Xavier; Baggesen, Dorte Lau; Jun, Se-Ran; Lund, Ole; Crook, Derrick W.; Wilson, Daniel J.; Aarestrup, Frank M.

2016-01-01

It has been 30 years since the initial emergence and subsequent rapid global spread of multidrug-resistant Salmonella enterica serovar Typhimurium DT104 (MDR DT104). Nonetheless, its origin and transmission route have never been revealed. We used whole-genome sequencing (WGS) and temporally structured sequence analysis within a Bayesian framework to reconstruct temporal and spatial phylogenetic trees and estimate the rates of mutation and divergence times of 315 S. Typhimurium DT104 isolates sampled from 1969 to 2012 from 21 countries on six continents. DT104 was estimated to have emerged initially as antimicrobial susceptible in ∼1948 (95% credible interval [CI], 1934 to 1962) and later became MDR DT104 in ∼1972 (95% CI, 1972 to 1988) through horizontal transfer of the 13-kb Salmonella genomic island 1 (SGI1) MDR region into susceptible strains already containing SGI1. This was followed by multiple transmission events, initially from central Europe and later between several European countries. An independent transmission to the United States and another to Japan occurred, and from there MDR DT104 was probably transmitted to Taiwan and Canada. An independent acquisition of resistance genes took place in Thailand in ∼1975 (95% CI, 1975 to 1990). In Denmark, WGS analysis provided evidence for transmission of the organism between herds of animals. Interestingly, the demographic history of Danish MDR DT104 provided evidence for the success of the program to eradicate Salmonella from pig herds in Denmark from 1996 to 2000. The results from this study refute several hypotheses on the evolution of DT104 and suggest that WGS may be useful in monitoring emerging clones and devising strategies for prevention of Salmonella infections. PMID:26944846

Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104

DOE PAGES

Leekitcharoenphon, Pimlapas; Hendriksen, Rene S.; Le Hello, Simon; ...

2016-03-04

It has been 30 years since the initial emergence and subsequent rapid global spread of multidrug-resistant Salmonella enterica serovar Typhimurium DT104 (MDR DT104). Nonetheless, its origin and transmission route have never been revealed. In this paper, we used whole-genome sequencing (WGS) and temporally structured sequence analysis within a Bayesian framework to reconstruct temporal and spatial phylogenetic trees and estimate the rates of mutation and divergence times of 315 S. Typhimurium DT104 isolates sampled from 1969 to 2012 from 21 countries on six continents. DT104 was estimated to have emerged initially as antimicrobial susceptible in ~1948 (95% credible interval [CI], 1934more » to 1962) and later became MDR DT104 in ~1972 (95% CI, 1972 to 1988) through horizontal transfer of the 13-kb Salmonella genomic island 1 (SGI1) MDR region into susceptible strains already containing SGI1. This was followed by multiple transmission events, initially from central Europe and later between several European countries. An independent transmission to the United States and another to Japan occurred, and from there MDR DT104 was probably transmitted to Taiwan and Canada. An independent acquisition of resistance genes took place in Thailand in ~1975 (95% CI, 1975 to 1990). In Denmark, WGS analysis provided evidence for transmission of the organism between herds of animals. Interestingly, the demographic history of Danish MDR DT104 provided evidence for the success of the program to eradicate Salmonella from pig herds in Denmark from 1996 to 2000. Finally, the results from this study refute several hypotheses on the evolution of DT104 and suggest that WGS may be useful in monitoring emerging clones and devising strategies for prevention of Salmonella infections.« less

Lung Cancer: Posttreatment Imaging: Radiation Therapy and Imaging Findings.

PubMed

Benveniste, Marcelo F; Welsh, James; Viswanathan, Chitra; Shroff, Girish S; Betancourt Cuellar, Sonia L; Carter, Brett W; Marom, Edith M

2018-05-01

In this review, we discuss the different radiation delivery techniques available to treat non-small cell lung cancer, typical radiologic manifestations of conventional radiotherapy, and different patterns of lung injury and temporal evolution of the newer radiotherapy techniques. More sophisticated techniques include intensity-modulated radiotherapy, stereotactic body radiotherapy, proton therapy, and respiration-correlated computed tomography or 4-dimensional computed tomography for radiotherapy planning. Knowledge of the radiation treatment plan and technique, the completion date of radiotherapy, and the temporal evolution of radiation-induced lung injury is important to identify expected manifestations of radiation-induced lung injury and differentiate them from tumor recurrence or infection. Published by Elsevier Inc.

Temporal variation in fault friction and its effects on the slip evolution of a thrust fault over several earthquake cycles

NASA Astrophysics Data System (ADS)

Hampel, Andrea; Hetzel, Ralf

2013-04-01

The friction coefficient is a key parameter for the slip evolution of faults, but how temporal changes in friction affect fault slip is still poorly known. By using three-dimensional numerical models with a thrust fault that is alternately locked and released, we show that variations in the friction coefficient affect both coseismic and long-term fault slip (Hampel and Hetzel, 2012). Decreasing the friction coefficient by 5% while keeping the duration of the interseismic phase constant leads to a four-fold increase in coseismic slip, whereas a 5% increase nearly suppresses slip. A gradual decrease or increase of friction over several earthquake cycles (1-5% per earthquake) considerably alters the cumulative fault slip. In nature, the slip deficit (surplus) resulting from variations in the friction coefficient would presumably be compensated by a longer (shorter) interseismic phase, but the magnitude of the changes required for compensation render variations of the friction coefficient of >5% unlikely. Reference Hampel, A., R. Hetzel (2012) Temporal variation in fault friction and its effects on the slip evolution of a thrust fault over several earthquake cycles. Terra Nova, 24, 357-362, doi: 10.1111/j.1365-3121.2012.01073.x.

Gene Tree Discordance Does Not Explain Away the Temporal Decline of Convergence in Mammalian Protein Sequence Evolution.

PubMed

Zou, Zhengting; Zhang, Jianzhi

2017-07-01

Several authors reported lower frequencies of protein sequence convergence between more distantly related evolutionary lineages and attributed this trend to epistasis, which renders the acceptable amino acids at a site more different and convergence less likely in more divergent lineages. A recent primate study, however, suggested that this trend is at least partially and potentially entirely an artifact of gene tree discordance (GTD). Here, we demonstrate in a genome-wide data set from 17 mammals that the temporal trend remains (1) upon the control of the GTD level, (2) in genes whose genealogies are concordant with the species tree, and (3) for convergent changes, which are extremely unlikely to be caused by GTD. Similar results are observed in a comparable data set of 12 fruit flies in some but not all of these tests. We conclude that, at least in some cases, the temporal decline of convergence is genuine, reflecting an impact of epistasis on protein evolution. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Antisite defect types and temporal evolution characteristics of D022-Ni3V structure: Studied by the microscopic phase field

NASA Astrophysics Data System (ADS)

Zhang, Jing; Chen, Zheng; Zhang, Mingyi; Lai, Qingbo; Lu, Yanli; Wang, Yongxin

2009-08-01

Microscopic phase field simulation is performed to study antisite defect type and temporal evolution characteristic of D022-Ni3V structure in Ni75Al x V25- x ternary system. The result demonstrates that two types of antisite defect VNi and NiV coexist in D022 structure; however, the amount of NiV is far greater than VNi; when precipitates transform from D022 singe phase to two phases mixture of D022 and L12 with enhanced Al:V ratio, the amount of VNi has no evident response to the secondary L12 phase, while NiV exhibits a definitely contrary variation tendency: NiV rises without L12 structure precipitating from matrix but declines with it; temporal evolution characteristic and temperature dependent antisite defect VNi, NiV are also studied in this paper: The concentrations of the both defects decline from high antistructure state to equilibrium level with elapsed time but rise with elevated temperature; the ternary alloying element aluminium atom occupies both α and β sublattices of D022 structure with a strong site preference of substituting α site.

Temporal evolution of water repellency and preferential flow in the post-fire

NASA Astrophysics Data System (ADS)

Alanís, Nancy; Jordán, Antonio; Zavala, Lorena M.

2015-04-01

Forest fires usually intensify erosive process due to the reduction of vegetation cover and degradation of aggregation in the topsoil. Another common effect of wildifres is the development of soil water repellency, which in turn favors the formation of runoff, inhibiting or delaying infiltration. Under these conditions, infiltration occurs only when ponded water or runoff flow finds macropores and cracks in the soil surface, producing preferential flow pathways. When water infiltrates through these paths, a significant portion of the soil remains dry, limiting the supply of nutrients to the roots, favoring the rapid leaching of nutrients and agrochemicals, and other impacts on flora and hydrological processes at hillslope- or basin-scale. The existence of irregular wetting fronts has been observed frequently in burned or unburned water repellent soils. Although some authors have suggested that preferential flow paths may be more or less permanent in the case of unburned soils, the temporal evolution of preferential flow has been rarely studied in burned soils during the post-fire, after water repellency decreases or disappears. This research focuses on the temporal evolution of water repellency and preferential flows in an area affected by fire.

Quantitative patterns of stylistic influence in the evolution of literature.

PubMed

Hughes, James M; Foti, Nicholas J; Krakauer, David C; Rockmore, Daniel N

2012-05-15

Literature is a form of expression whose temporal structure, both in content and style, provides a historical record of the evolution of culture. In this work we take on a quantitative analysis of literary style and conduct the first large-scale temporal stylometric study of literature by using the vast holdings in the Project Gutenberg Digital Library corpus. We find temporal stylistic localization among authors through the analysis of the similarity structure in feature vectors derived from content-free word usage, nonhomogeneous decay rates of stylistic influence, and an accelerating rate of decay of influence among modern authors. Within a given time period we also find evidence for stylistic coherence with a given literary topic, such that writers in different fields adopt different literary styles. This study gives quantitative support to the notion of a literary "style of a time" with a strong trend toward increasingly contemporaneous stylistic influence.

Cortical processing of tactile stimuli applied in quick succession across the fingertips: temporal evolution of dipole sources revealed by magnetoencephalography.

PubMed

Karageorgiou, Elissaios; Koutlas, Ioannis G; Alonso, Aurelio A; Leuthold, Arthur C; Lewis, Scott M; Georgopoulos, Apostolos P

2008-08-01

We used magnetoencephalography (MEG) in 10 healthy human subjects to study cortical responses to tactile stimuli applied to the fingertips of digits 2-5 of the right hand. Each stimulus lasted 50 ms and was produced by air-driven elastic membranes. Four-hundred stimuli were delivered on each finger in three temporal patterns (conditions). In the "Discrete" condition, stimuli were applied to each finger repetitively with an interstimulus interval (ISI) of 1-2 s. In the "Continuous" condition, stimuli were applied to the fingers sequentially as four-stimulus trains with zero ISI and 1-2 s intervening between trains. Finally, in the "Gap" condition, stimuli were applied as in the Continuous condition but with an ISI of 50 ms. A sensation of tactile motion across fingers (digit 2 --> digit 5) was reported by all subjects in the Continuous and Gap conditions. Cortical responses were extracted as single equivalent current dipoles over a period of 1 s following stimulus onset. In all three conditions, initial responses in left primary somatosensory cortex (SI) were observed ~20 to 50 ms after stimulus onset and were followed by additional left SI responses and bilateral responses in the secondary somatosensory cortex (SII). In addition, in the Continuous and Gap conditions, there was an activation of the precentral gyrus, the temporal aspects of which depended on the temporal relation of the administered stimuli, as follows. An ISI of 0 ms led to activation of the precentral gyrus shortly after the second stimulation, whereas an ISI of 50 ms led to activation of the precentral gyrus after the third stimulation. The current findings support results from previous studies on temporal activity patterns in SI and SII, verify the participation of the precentral gyrus during tactile motion perception and, in addition, reveal aspects of integration of sequential sensory stimulations over nonadjacent areas as well as temporal activity patterns in the postcentral and precentral gyri.

A Model of the Temporal Dynamics of Knowledge Brokerage in Sustainable Development

ERIC Educational Resources Information Center

Hukkinen, Janne I.

2016-01-01

I develop a conceptual model of the temporal dynamics of knowledge brokerage for sustainable development. Brokerage refers to efforts to make research and policymaking more accessible to each other. The model enables unbiased and systematic consideration of knowledge brokerage as part of policy evolution. The model is theoretically grounded in…

Kon-Tiki: Spatio-Temporal Maps for Socio-Economic Sustainability

ERIC Educational Resources Information Center

Ahamer, Gilbert

2014-01-01

Purpose: The overall purpose of this paper is to detect spatial, temporal, sectoral, thematic and other patterns or transitions in techno-socio-economic evolution that are likely to co-determine future development and allow the steering of it. The development of a "Global Change Data Base" (GCDB) promises a graphically and geographically…

Gas transport processes in sea ice: How convection and diffusion processes might affect biological imprints, a challenge for modellers

NASA Astrophysics Data System (ADS)

Tison, J.-L.; Zhou, J.; Thomas, D. N.; Rysgaard, S.; Eicken, H.; Crabeck, O.; Deleu, F.; Delille, B.

2012-04-01

Recent data from a year-round survey of landfast sea ice growth in Barrow (Alaska) have shown how O2/N2 and O2/Ar ratios could be used to pinpoint primary production in sea ice and derive net productivity rates from the temporal evolution of the oxygen concentration at a given depth within the sea ice cover. These rates were however obtained surmising that neither convection, nor diffusion had affected the gas concentration profiles in the ice between discrete ice core collections. This paper discusses examples from three different field surveys (the above-mentioned Barrow experiment, the INTERICE IV tank experiment in Hamburg and a short field survey close to the Kapisilit locality in the South-East Greenland fjords) where convection or diffusion processes have clearly affected the temporal evolution of the gas profiles in the ice, therefore potentially affecting biological signatures. The INTERICE IV and Barrow experiment show that the initial equilibrium dissolved gas entrapment within the skeletal layer basically governs most of the profiles higher up in the sea ice cover during the active sea ice growth. However, as the ice layers age and cool down under the temperature gradient, bubble nucleation occurs while the concentration in the ice goes well above the theoretical one, calculated from brine equilibrium under temperature and salinity changes and observed brine volumes. This phase change locks the gases within the sea ice structure, preventing "degassing" of the ice, as is observed for salts under the mushy layer brine convection process. In some cases, mainly in the early stages of the freezing process (first 10-20 cm) where temperature gradients are strong and the ice still permeable on its whole thickness, repeated convection and bubble nucleation can actually increase the gas concentration in the ice above the one initially acquired within the skeletal layer. Convective processes will also occur on ice decay, when ice permeability is restored and the Rayleigh number reaches a critical value. The Barrow data set shows that these events, can be strong enough to redistribute the gases within the sea ice cover, including in the gaseous form. Diffusive processes will become dominant once internal melting is strong enough to stratify the brine network within the ice. In the Kapisilit case, the regular decrease of an internal gas peak intensity due to external forcing during ice growth (change of water type) has allowed us to deduce gas diffusivities from the temporal evolution of the peak. The values fit to the few previous estimates from experimental work, and lie close to diffusivity values in water. Finally, at the end of the decay phase, when the temperature profile is isothermal, the whole ice cover returns to ice concentrations equivalent to those calculated using gas solubility in water and observed brine volumes, to the exception of the very surface layer, generally for textural reasons.

Single-shot pulse duration and intensity diagnostic for 10-ps MeV gamma pulses based on interferometry

NASA Astrophysics Data System (ADS)

Peng, Bo-dong; Hei, Dong-wei; Song, Yan; Liu, Jun; Zhao, Jun

2018-04-01

To measure the temporal width and the intensity evolution versus time of a MeV gamma pulse generated by a Compton Scatter Source, a time-space conversion method is proposed. This design is based on the consideration that the temporal length of the MeV pulse is proportional to the spatial length of the pulse in a certain semiconductor. The spatial length and the intensity evolution versus time of the MeV pulse can be obtained by recording the region of the refractive index change that is induced by the MeV pulse. The simulation suggests that the equivalent temporal spread of a mono-energy MeV δ pulse in a bulk semiconductor is on the order of picoseconds and does not vary significantly with photon energy and material type. According to our analysis, the excess carrier generation time, excess carrier diffusion and recombination do not significantly influence the temporal resolution of this method. The temporal response of the refractive index change to a MeV pulse is also fast enough to meet the measurement requirements. The signal generation process for measuring a 10-ps MeV pulse with a 200-fs probe beam is analyzed, revealing that the transverse size of the MeV pulse does not influence the temporal resolution of this method.

Convective heat transfer in a measurement cell for scanning electrochemical microscopy.

PubMed

Novev, Javor K; Compton, Richard G

2016-11-21

Electrochemical experiments, especially those performed with scanning electrochemical microscopy (SECM), are often carried out without taking special care to thermostat the solution; it is usually assumed that its temperature is homogeneous and equal to the ambient. The present study aims to test this assumption via numerical simulations of the heat transfer in a particular system - the typical measurement cell for SECM. It is assumed that the temperature of the solution is initially homogeneous but different from that of its surroundings; convective heat transfer in the solution and the surrounding air is taken into account within the framework of the Boussinesq approximation. The hereby presented theoretical treatment indicates that an initial temperature difference of the order of 1 K dissipates with a characteristic time scale of ∼1000 s; the thermal equilibration is accompanied by convective flows with a maximum velocity of ∼10 -4 m s -1 ; furthermore, the temporal evolution of the temperature profile is influenced by the sign of the initial difference. These results suggest that, unless the temperature of the solution is rigorously controlled, convection may significantly compromise the interpretation of data from SECM and other electrochemical techniques, which is usually done on the basis of diffusion-only models.

Spatio-Temporal Variation in Landscape Composition May Speed Resistance Evolution of Pests to Bt Crops.

PubMed

Ives, Anthony R; Paull, Cate; Hulthen, Andrew; Downes, Sharon; Andow, David A; Haygood, Ralph; Zalucki, Myron P; Schellhorn, Nancy A

2017-01-01

Transgenic crops that express insecticide genes from Bacillus thuringiensis (Bt) are used worldwide against moth and beetle pests. Because these engineered plants can kill over 95% of susceptible larvae, they can rapidly select for resistance. Here, we use a model for a pyramid two-toxin Bt crop to explore the consequences of spatio-temporal variation in the area of Bt crop and non-Bt refuge habitat. We show that variability over time in the proportion of suitable non-Bt breeding habitat, Q, or in the total area of Bt and suitable non-Bt habitat, K, can increase the overall rate of resistance evolution by causing short-term surges of intense selection. These surges can be exacerbated when temporal variation in Q and/or K cause high larval densities in refuges that increase density-dependent mortality; this will give resistant larvae in Bt fields a relative advantage over susceptible larvae that largely depend on refuges. We address the effects of spatio-temporal variation in a management setting for two bollworm pests of cotton, Helicoverpa armigera and H. punctigera, and field data on landscape crop distributions from Australia. Even a small proportion of Bt fields available to egg-laying females when refuges are sparse may result in high exposure to Bt for just a single generation per year and cause a surge in selection. Therefore, rapid resistance evolution can occur when Bt crops are rare rather than common in the landscape. These results highlight the need to understand spatio-temporal fluctuations in the landscape composition of Bt crops and non-Bt habitats in order to design effective resistance management strategies.

Density and white light brightness in looplike coronal mass ejections - Temporal evolution

NASA Technical Reports Server (NTRS)

Steinolfson, R. S.; Hundhausen, A. J.

1988-01-01

Three ambient coronal models suitable for studies of time-dependent phenomena were used to investigate the propagation of coronal mass ejections initiated in each atmosphere by an identical energy source. These models included those of a static corona with a dipole magnetic field, developed by Dryer et al. (1979); a steady polytropic corona with an equatorial coronal streamer, developed by Steinolfson et al. (1982); and Steinolfson's (1988) model of heated corona with an equatorial coronal streamer. The results indicated that the first model does not adequately represent the general characteristics of observed looplike mass ejections, and the second model simulated only some of the observed features. Only the third model, which included a heating term and a streamer, was found to yield accurate simulation of the mess ejection observations.

Probing coherence in microcavity frequency combs via optical pulse shaping

NASA Astrophysics Data System (ADS)

Ferdous, Fahmida; Miao, Houxun; Wang, Pei-Hsun; Leaird, Daniel E.; Srinivasan, Kartik; Chen, Lei; Aksyuk, Vladimir; Weiner, Andrew M.

2012-09-01

Recent investigations of microcavity frequency combs based on cascaded four-wave mixing have revealed a link between the evolution of the optical spectrum and the observed temporal coherence. Here we study a silicon nitride microresonator for which the initial four-wave mixing sidebands are spaced by multiple free spectral ranges (FSRs) from the pump, then fill in to yield a comb with single FSR spacing, resulting in partial coherence. By using a pulse shaper to select and manipulate the phase of various subsets of spectral lines, we are able to probe the structure of the coherence within the partially coherent comb. Our data demonstrate strong variation in the degree of mutual coherence between different groups of lines and provide support for a simple model of partially coherent comb formation.

Spectroscopy and optical imaging of coalescing droplets

NASA Astrophysics Data System (ADS)

Ivanov, Maksym; Viderström, Michel; Chang, Kelken; Ramírez Contreras, Claudia; Mehlig, Bernhard; Hanstorp, Dag

2016-09-01

We report on experimental investigations of the dynamics of colliding liquid droplets by combining optical trapping, spectroscopy and high-speed color imaging. Two droplets with diameters between 5 and 50 microns are suspended in quiescent air by optical traps. The traps allows us to control the initial positions, and hence the impact parameter and the relative velocity of the colliding droplets. Movies of the droplet dynamics are recorded using high-speed digital movie cameras at a frame rate of up to 63000 frames per second. A fluorescent dye is added to one of the colliding droplets. We investigate the temporal evolution of the scattered and fluorescence light from the colliding droplets with concurrent spectroscopy and color imaging. This technique can be used to detect the exchange of molecules between a pair of neutral or charged droplets.

Dynamical Crossovers in Prethermal Critical States.

PubMed

Chiocchetta, Alessio; Gambassi, Andrea; Diehl, Sebastian; Marino, Jamir

2017-03-31

We study the prethermal dynamics of an interacting quantum field theory with an N-component order parameter and O(N) symmetry, suddenly quenched in the vicinity of a dynamical critical point. Depending on the initial conditions, the evolution of the order parameter, and of the response and correlation functions, can exhibit a temporal crossover between universal dynamical scaling regimes governed, respectively, by a quantum and a classical prethermal fixed point, as well as a crossover from a Gaussian to a non-Gaussian prethermal dynamical scaling. Together with a recent experiment, this suggests that quenches may be used in order to explore the rich variety of dynamical critical points occurring in the nonequilibrium dynamics of a quantum many-body system. We illustrate this fact by using a combination of renormalization group techniques and a nonperturbative large-N limit.

Asymptotic Analysis of Time-Dependent Neutron Transport Coupled with Isotopic Depletion and Radioactive Decay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brantley, P S

2006-09-27

We describe an asymptotic analysis of the coupled nonlinear system of equations describing time-dependent three-dimensional monoenergetic neutron transport and isotopic depletion and radioactive decay. The classic asymptotic diffusion scaling of Larsen and Keller [1], along with a consistent small scaling of the terms describing the radioactive decay of isotopes, is applied to this coupled nonlinear system of equations in a medium of specified initial isotopic composition. The analysis demonstrates that to leading order the neutron transport equation limits to the standard time-dependent neutron diffusion equation with macroscopic cross sections whose number densities are determined by the standard system of ordinarymore » differential equations, the so-called Bateman equations, describing the temporal evolution of the nuclide number densities.« less

Evolution of fore-arc and back-arc sedimentary basins with focus on the Japan subduction system and its analogues

NASA Astrophysics Data System (ADS)

Sato, Hiroshi; Ishiyama, Tatsuya; Matenco, Liviu; Nader, Fadi Henri

2017-07-01

The International Lithosphere Program (ILP) seeks to elucidate the nature, dynamics, origin and evolution of the lithosphere through international, multidisciplinary geoscience research projects and coordinating committees (Cloetingh and Negendank, 2010). The focus of the Task Force VI Sedimentary Basins activities is to foster collaborations between academia, research institutes and industry in all domains relevant for the understanding of sedimentary basins, from regional to nano-scale, from the deep earth to near surface processes (e.g., Roure et al., 2010, 2013). In this activity, it is important to develop and validate novel concepts of sedimentary basin evolution and topography building by incorporating geological/geophysical datasets and methodologies applied to worldwide natural laboratories (Cloetingh et al., 2011; Cloetingh and Willett, 2013; Matenco and Andriessen, 2013). The Task Force aims to understand and predict the processes that control the formation and evolution of the coupled orogens and sedimentary basins system through integration of field studies, analytical techniques and numerical/analogue modelling. At the same time, the Task Force aims to promote research in the domain of sedimentary basins evolution and quantitative tectonics for the study of mountain building and the subsequent extensional collapse, and their quantitative implications for vertical motions on different temporal and spatial scales (Gibson et al., 2015; Matenco et al., 2016; Roure, 2008; Seranne et al., 2015). The implications of tectonics on basin fluids (fluid-flow and rock-fluid interactions) are important to understand and predict geo-resources (e.g., Nader, 2016). Important is to initiate innovative research lines in linking the evolution of sedimentary systems by integrating cross-disciplinary expertise with a focus on integrated sedimentary basins and orogenic evolution. The key is to strengthen the synergy between academic research and applied industry in large (inter)national interdisciplinary research networks able to tackle complex problems at integrated system level.

Put Your Imperfections behind You: Temporal Landmarks Spur Goal Initiation When They Signal New Beginnings

PubMed Central

Dai, Hengchen; Milkman, Katherine L.; Riis, Jason

2016-01-01

People often fail to muster the motivation needed to initiate goal pursuit. Across five laboratory experiments, we explore when people naturally experience enhanced motivation to take actions that facilitate goal pursuit and why certain days are more likely to spur goal initiation than others. We provide causal evidence that emphasizing a temporal landmark marking the beginning of a new time period increases people’s intentions to initiate goal pursuit. In addition, we propose and show that people’s strengthened motivation to begin pursuing their aspirations following such temporal landmarks originates in part from the psychological disassociation these landmarks induce from a person’s past, imperfect self. PMID:26546079

Sensitivity of the two-dimensional shearless mixing layer to the initial turbulent kinetic energy and integral length scale

NASA Astrophysics Data System (ADS)

Fathali, M.; Deshiri, M. Khoshnami

2016-04-01

The shearless mixing layer is generated from the interaction of two homogeneous isotropic turbulence (HIT) fields with different integral scales ℓ1 and ℓ2 and different turbulent kinetic energies E1 and E2. In this study, the sensitivity of temporal evolutions of two-dimensional, incompressible shearless mixing layers to the parametric variations of ℓ1/ℓ2 and E1/E2 is investigated. The sensitivity methodology is based on the nonintrusive approach; using direct numerical simulation and generalized polynomial chaos expansion. The analysis is carried out at Reℓ 1=90 for the high-energy HIT region and different integral length scale ratios 1 /4 ≤ℓ1/ℓ2≤4 and turbulent kinetic energy ratios 1 ≤E1/E2≤30 . It is found that the most influential parameter on the variability of the mixing layer evolution is the turbulent kinetic energy while variations of the integral length scale show a negligible influence on the flow field variability. A significant level of anisotropy and intermittency is observed in both large and small scales. In particular, it is found that large scales have higher levels of intermittency and sensitivity to the variations of ℓ1/ℓ2 and E1/E2 compared to the small scales. Reconstructed response surfaces of the flow field intermittency and the turbulent penetration depth show monotonic dependence on ℓ1/ℓ2 and E1/E2 . The mixing layer growth rate and the mixing efficiency both show sensitive dependence on the initial condition parameters. However, the probability density function of these quantities shows relatively small solution variations in response to the variations of the initial condition parameters.

Emerging Concepts of Data Integration in Pathogen Phylodynamics.

PubMed

Baele, Guy; Suchard, Marc A; Rambaut, Andrew; Lemey, Philippe

2017-01-01

Phylodynamics has become an increasingly popular statistical framework to extract evolutionary and epidemiological information from pathogen genomes. By harnessing such information, epidemiologists aim to shed light on the spatio-temporal patterns of spread and to test hypotheses about the underlying interaction of evolutionary and ecological dynamics in pathogen populations. Although the field has witnessed a rich development of statistical inference tools with increasing levels of sophistication, these tools initially focused on sequences as their sole primary data source. Integrating various sources of information, however, promises to deliver more precise insights in infectious diseases and to increase opportunities for statistical hypothesis testing. Here, we review how the emerging concept of data integration is stimulating new advances in Bayesian evolutionary inference methodology which formalize a marriage of statistical thinking and evolutionary biology. These approaches include connecting sequence to trait evolution, such as for host, phenotypic and geographic sampling information, but also the incorporation of covariates of evolutionary and epidemic processes in the reconstruction procedures. We highlight how a full Bayesian approach to covariate modeling and testing can generate further insights into sequence evolution, trait evolution, and population dynamics in pathogen populations. Specific examples demonstrate how such approaches can be used to test the impact of host on rabies and HIV evolutionary rates, to identify the drivers of influenza dispersal as well as the determinants of rabies cross-species transmissions, and to quantify the evolutionary dynamics of influenza antigenicity. Finally, we briefly discuss how data integration is now also permeating through the inference of transmission dynamics, leading to novel insights into tree-generative processes and detailed reconstructions of transmission trees. [Bayesian inference; birth–death models; coalescent models; continuous trait evolution; covariates; data integration; discrete trait evolution; pathogen phylodynamics.

Lidar observation of Eyjafjallajoekull ash layer evolution above the Swiss Plateau

NASA Astrophysics Data System (ADS)

Simeonov, Valentin; Dinoev, Todor; Parlange, Mark; Serikov, Ilya; Calpini, Bertrand; Wienhold, F.; Engel, I.; Brabec, M.; Crisian, A.; Peter, T.; Mitev, Valentin; Matthey, R.

2010-05-01

The Iceland volcano Eyjafjallajökull started to emit significant amounts of volcanic ash and SO2 on 15th April 2010, following the initial eruption on 20th March 2010. In the next days, the ash was dispersed over large parts of Europe resulting in the closure of the major part of the European airspace. Information about spatial and temporal evolution of the cloud was needed urgently to define the conditions for opening the airspace. Satellite, airborne and ground observations together with meteorological models were used to evaluate the cloud propagation and evolution. While the horizontal extents of the volcanic cloud were accurately captured by satellite images, it remained difficult to obtain accurate information about the cloud base and top height, density and dynamics. During this event lidars demonstrated that they were the only ground based instruments allowing monitoring of the vertical distribution of the volcanic ash. Here we present observational results showing the evolution of the volcanic layer over the Swiss plateau. The measurements were carried out by one Raman lidar located in Payerne, two elastic lidars located in Neuchatel and Zurich, and a backscatter sonde launched from Zurich. The observations by the lidars have shown very similar time evolution, coherent with the backscatter sonde profiles and characterized by the appearance of the ash layer on the evening of 16th, followed by descend to 2-3 km during the next day and final mixing with the ABL on 19th. Simultaneous water vapor data from the Payerne lidar show low water content of the ash layer. The CSEM and EPFL gratefully acknowledge the financial support by the European Commission under grant RICA-025991.

Emerging Concepts of Data Integration in Pathogen Phylodynamics

PubMed Central

Baele, Guy; Suchard, Marc A.; Rambaut, Andrew; Lemey, Philippe

2017-01-01

Phylodynamics has become an increasingly popular statistical framework to extract evolutionary and epidemiological information from pathogen genomes. By harnessing such information, epidemiologists aim to shed light on the spatio-temporal patterns of spread and to test hypotheses about the underlying interaction of evolutionary and ecological dynamics in pathogen populations. Although the field has witnessed a rich development of statistical inference tools with increasing levels of sophistication, these tools initially focused on sequences as their sole primary data source. Integrating various sources of information, however, promises to deliver more precise insights in infectious diseases and to increase opportunities for statistical hypothesis testing. Here, we review how the emerging concept of data integration is stimulating new advances in Bayesian evolutionary inference methodology which formalize a marriage of statistical thinking and evolutionary biology. These approaches include connecting sequence to trait evolution, such as for host, phenotypic and geographic sampling information, but also the incorporation of covariates of evolutionary and epidemic processes in the reconstruction procedures. We highlight how a full Bayesian approach to covariate modeling and testing can generate further insights into sequence evolution, trait evolution, and population dynamics in pathogen populations. Specific examples demonstrate how such approaches can be used to test the impact of host on rabies and HIV evolutionary rates, to identify the drivers of influenza dispersal as well as the determinants of rabies cross-species transmissions, and to quantify the evolutionary dynamics of influenza antigenicity. Finally, we briefly discuss how data integration is now also permeating through the inference of transmission dynamics, leading to novel insights into tree-generative processes and detailed reconstructions of transmission trees. [Bayesian inference; birth–death models; coalescent models; continuous trait evolution; covariates; data integration; discrete trait evolution; pathogen phylodynamics. PMID:28173504

Modeling photopolymers for holographic data storage applications

NASA Astrophysics Data System (ADS)

Sheridan, John T.; Kelly, John V.; Gleeson, Michael R.; Close, Ciara E.

2006-09-01

The Nonlocal Polymerization Driven Diffusion model, NPDD, is can be used to describe holographic grating formation in Acrylamide-based photopolymer. The free radical chain polymerization process results in polymer being generated nonlocal both in space and time to the point of chain initiation. Temporal nonlocality can be used to describepost exposure dark effects. Nonlinear response and the effects of dye bleaching have been examined. Both primary and bimolecular chain termination mechanisms have been included and examined. Recently 3-D, and inhibition effects have also been included. In this paper we review of our recent work. It is shown that temporal effects become most notable for short exposres and the inclusion of the nonlocal temporal response function is shown to be necessary to accurately describe the process. In particular, brief post exposure self-amplification of the refractive index modulation is noted. This is attributed to continued chain growth for a brief period after exposure. Following this a slight decay in the grating amplitude also occurs. This we believe is due to the continued diffusion of monomer after exposure. Since the sinusoidal recording pattern generates a monomer concentration gradient during the recording process monomer diffusion occurs both during and after exposure. The evolution of the refractive index modulation is determined by the respective refractive index values of the recording material components. From independent measurements it is noted that the refractive index value of the monomer is slightly less than that of the background material. Therefore as monomer diffuses back into the dark regions, a reduction in overall refractive index modulation occurs. Volume changes occurring within the material also affect the nature of grating evolution. To model these effects we employ a free volume concept. Due to the fact that the covalent single carbon bond in the polymer is up to 50% shorter than the van der Waals bond in the liquid monomer state, free volume is created when monomer is converted to polymer. For each bond conversion we assume a hole is generated which then collapses at some characteristic rate constant. The Lorentz-Lorenz relation is used to determine the overall evolution refractive index modulation and the corresponding diffraction efficiency of the resulting grating is calculated using Rigorous Coupled Wave Analysis (RCWA). The Lorentz-Lorenz relation is used to determine the overall evolution refractive index modulation and the corresponding diffraction efficiency of the resulting grating is calculated using Rigorous Coupled Wave Analysis (RCWA). Inhibition is typically observed at the start of grating growth during which the formation of polymer chains is suppressed. In this paper experiments are reported, carried out with the specific aim of understanding of these processes. The results support our description of the inhibition process in an PVA/Acrylamide based photopolymer and can be used to predict behaviour under certain conditions.

Swift monitoring observations of 1H 1743-322 and its evolution towards a state transition

NASA Astrophysics Data System (ADS)

Yan, Zhen; Lin, Jie; Yu, Wenfei; Zhang, Wenda; Zhang, Hui; Mao, Dongming

2016-03-01

Following the report of the new outburst of black hole X-ray binary H1743-322 (ATel #8751), we requested a series of Swift ToO observations to monitor the X-ray temporal and spectral evolution and potential jet contribution to the UV flux during the outburst.

An in situ USAXS-SAXS-WAXS study of precipitate size distribution evolution in a model Ni-based alloy.

PubMed

Andrews, Ross N; Serio, Joseph; Muralidharan, Govindarajan; Ilavsky, Jan

2017-06-01

Intermetallic γ' precipitates typically strengthen nickel-based superalloys. The shape, size and spatial distribution of strengthening precipitates critically influence alloy strength, while their temporal evolution characteristics determine the high-temperature alloy stability. Combined ultra-small-, small- and wide-angle X-ray scattering (USAXS-SAXS-WAXS) analysis can be used to evaluate the temporal evolution of an alloy's precipitate size distribution (PSD) and phase structure during in situ heat treatment. Analysis of PSDs from USAXS-SAXS data employs either least-squares fitting of a preordained PSD model or a maximum entropy (MaxEnt) approach, the latter avoiding a priori definition of a functional form of the PSD. However, strong low- q scattering from grain boundaries and/or structure factor effects inhibit MaxEnt analysis of typical alloys. This work describes the extension of Bayesian-MaxEnt analysis methods to data exhibiting structure factor effects and low- q power law slopes and demonstrates their use in an in situ study of precipitate size evolution during heat treatment of a model Ni-Al-Si alloy.

An in situ USAXS–SAXS–WAXS study of precipitate size distribution evolution in a model Ni-based alloy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Andrews, Ross N.; Serio, Joseph A.; Muralidharan, Govindarajan

Intermetallic γ' precipitates typically strengthen nickel-based superalloys. The shape, size and spatial distribution of strengthening precipitates critically influence alloy strength, while their temporal evolution characteristics determine the high-temperature alloy stability. Combined ultra-small-, small- and wide-angle X-ray scattering (USAXS–SAXS–WAXS) analysis can be used to evaluate the temporal evolution of an alloy's precipitate size distribution (PSD) and phase structure duringin situheat treatment. Analysis of PSDs from USAXS–SAXS data employs either least-squares fitting of a preordained PSD model or a maximum entropy (MaxEnt) approach, the latter avoidinga prioridefinition of a functional form of the PSD. However, strong low-qscattering from grain boundaries and/or structuremore » factor effects inhibit MaxEnt analysis of typical alloys. Lastly, this work describes the extension of Bayesian–MaxEnt analysis methods to data exhibiting structure factor effects and low-qpower law slopes and demonstrates their use in anin situstudy of precipitate size evolution during heat treatment of a model Ni–Al–Si alloy.« less

An in situ USAXS–SAXS–WAXS study of precipitate size distribution evolution in a model Ni-based alloy1

PubMed Central

Andrews, Ross N.; Serio, Joseph; Muralidharan, Govindarajan; Ilavsky, Jan

2017-01-01

Intermetallic γ′ precipitates typically strengthen nickel-based superalloys. The shape, size and spatial distribution of strengthening precipitates critically influence alloy strength, while their temporal evolution characteristics determine the high-temperature alloy stability. Combined ultra-small-, small- and wide-angle X-ray scattering (USAXS–SAXS–WAXS) analysis can be used to evaluate the temporal evolution of an alloy’s precipitate size distribution (PSD) and phase structure during in situ heat treatment. Analysis of PSDs from USAXS–SAXS data employs either least-squares fitting of a preordained PSD model or a maximum entropy (MaxEnt) approach, the latter avoiding a priori definition of a functional form of the PSD. However, strong low-q scattering from grain boundaries and/or structure factor effects inhibit MaxEnt analysis of typical alloys. This work describes the extension of Bayesian–MaxEnt analysis methods to data exhibiting structure factor effects and low-q power law slopes and demonstrates their use in an in situ study of precipitate size evolution during heat treatment of a model Ni–Al–Si alloy. PMID:28656039

An in situ USAXS–SAXS–WAXS study of precipitate size distribution evolution in a model Ni-based alloy

DOE PAGES

Andrews, Ross N.; Serio, Joseph A.; Muralidharan, Govindarajan; ...

2017-05-30

Intermetallic γ' precipitates typically strengthen nickel-based superalloys. The shape, size and spatial distribution of strengthening precipitates critically influence alloy strength, while their temporal evolution characteristics determine the high-temperature alloy stability. Combined ultra-small-, small- and wide-angle X-ray scattering (USAXS–SAXS–WAXS) analysis can be used to evaluate the temporal evolution of an alloy's precipitate size distribution (PSD) and phase structure duringin situheat treatment. Analysis of PSDs from USAXS–SAXS data employs either least-squares fitting of a preordained PSD model or a maximum entropy (MaxEnt) approach, the latter avoidinga prioridefinition of a functional form of the PSD. However, strong low-qscattering from grain boundaries and/or structuremore » factor effects inhibit MaxEnt analysis of typical alloys. Lastly, this work describes the extension of Bayesian–MaxEnt analysis methods to data exhibiting structure factor effects and low-qpower law slopes and demonstrates their use in anin situstudy of precipitate size evolution during heat treatment of a model Ni–Al–Si alloy.« less

A New Dynamic 3D Virtual Methodology for Teaching the Mechanics of Atrial Septation as Seen in the Human Heart

ERIC Educational Resources Information Center

Schleich, Jean-Marc; Dillenseger, Jean-Louis; Houyel, Lucile; Almange, Claude; Anderson, Robert H.

2009-01-01

Learning embryology remains difficult, since it requires understanding of many complex phenomena. The temporal evolution of developmental events has classically been illustrated using cartoons, which create difficulty in linking spatial and temporal aspects, such correlation being the keystone of descriptive embryology. We synthesized the…

High-speed multi-frame laser Schlieren for visualization of explosive events

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Murphy, M. J.; Landon, C. D.; Mason, T. A.; Adrian, R. J.; Akinci, A. A.; Martinez, M. E.; Thomas, K. A.

2007-09-01

High-Speed Multi-Frame Laser Schlieren is used for visualization of a range of explosive and non-explosive events. Schlieren is a well-known technique for visualizing shock phenomena in transparent media. Laser backlighting and a framing camera allow for Schlieren images with very short (down to 5 ns) exposure times, band pass filtering to block out explosive self-light, and 14 frames of a single explosive event. This diagnostic has been applied to several explosive initiation events, such as exploding bridgewires (EBW), Exploding Foil Initiators (EFI) (or slappers), Direct Optical Initiation (DOI), and ElectroStatic Discharge (ESD). Additionally, a series of tests have been performed on "cut-back" detonators with varying initial pressing (IP) heights. We have also used this Diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. The setup has also been used to visualize a range of other explosive events, such as explosively driven metal shock experiments and explosively driven microjets. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. Finite element codes (EPIC, CTH) have been used to analyze the schlieren images to determine likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. These experiments are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation.

Coarsening of ion-beam-induced surface ripple in Si: Nonlinear effect vs. geometrical shadowing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Datta, Debi Prasad; Chini, Tapas Kumar

The temporal evolution of a periodic ripple pattern on a silicon surface undergoing erosion by 30 keV argon ion bombardment has been studied for two angles of ion incidence of 60 deg. and 70 deg. using ex situ atomic force microscopy (AFM) in ambient condition. The roughness amplitude (w) grows exponentially with sputtering time for both the angle of ion incidence followed by a slow growth process that saturates eventually with almost constant amplitude. Within the exponential growth regime of amplitude, however, ripple wavelength (l) remains constant initially and increases subsequently as a power law fashion l{proportional_to}t{sup n}, where n=0.47{+-}0.02more » for a 60 deg. angle of ion incidence followed by a saturation. Wavelength coarsening was also observed for 70 deg. but ordering in the periodic ripple pattern is destroyed quickly for 70 deg. as compared to 60 deg. . The ripple orientation, average ripple wavelength at the initial stage of ripple evolution, and the exponential growth of ripple amplitude can be described by a linear continuum model. While the wavelength coarsening could possibly be explained in the light of recent hydrodynamic model based continuum theory, the subsequent saturation of wavelength and amplitude was attributed to the effect of geometrical shadowing. This is an experimental result that probably gives a hint about the upper limit of the energy of ion beam rippling for applying the recently developed type of nonlinear continuum model.« less

The Reel Deal In 3D: The Spatio-Temporal Evolution of YSO Jets

NASA Astrophysics Data System (ADS)

Frank, Adam

2014-10-01

Jets are a ubiquitous phenomena in astrophysics, though in most cases their central engines are unresolvable. Thus the structure of the jets often acts as a proxy for understanding the objects creating them. Jets are also of interest in their own right, serving as critical examples of rapidly evolving astrophysical magnetized plasma systems. And while millions of CPU hours {at least} have been spent simulating the kinds of astrophysical plasma dynamics that occur routinely in jets, we rarely have had the chance to study their real-time evolution. In this proposal we seek to use a unique multi-epoch HST dataset of protostellar jets to carry forward an innovative theoretical, numerical and laboratory-based study of magnetized outflows and the plasma processes which determine their evolution. Our work will make direct and detailed contact with these HST data sets and will articulate newly-observed features of jet dynamics that have not been possible to explore before. Using numerical simulations and laboratory plasma studies we seek to articulate the full 3-D nature of new behaviors seen in the HST data. Our collaboration includes the use of scaled laboratory plasma experiments with hypersonic magnetized radiative jets. The MHD experiments have explored how jets break up into clumps via kink-mode instabilities. Therefore such experiments are directly relevant to the initial conditions in our models.

Spatial and temporal evolutions of ozone in a nanosecond pulse corona discharge at atmospheric pressure

NASA Astrophysics Data System (ADS)

Duten, X.; Redolfi, M.; Aggadi, N.; Vega, A.; Hassouni, K.

2011-10-01

This paper deals with the experimental determination of the spatial and temporal evolutions of the ozone concentration in an atmospheric pressure pulsed plasma, working in the nanosecond regime. We observed that ozone was produced in the localized region of the streamer. The ozone transport requires a characteristic time well above the millisecond. The numerical modelling of the streamer expansion confirms that the hydrodynamic expansion of the filamentary discharge region during the streamer propagation does not lead to a significant transport of atomic oxygen and ozone. It appears therefore that only diffusional transport can take place, which requires a characteristic time of the order of 50 ms.

Temporal-spatial measurement of electron relaxation time in femtosecond laser induced plasma using two-color pump-probe imaging technique

NASA Astrophysics Data System (ADS)

Pan, Changji; Jiang, Lan; Wang, Qingsong; Sun, Jingya; Wang, Guoyan; Lu, Yongfeng

2018-05-01

The femtosecond (fs) laser is a powerful tool to study ultrafast plasma dynamics, especially electron relaxation in strong ionization of dielectrics. Herein, temporal-spatial evolution of femtosecond laser induced plasma in fused silica was investigated using a two-color pump-probe technique (i.e., 400 nm and 800 nm, respectively). We demonstrated that when ionized electron density is lower than the critical density, free electron relaxation time is inversely proportional to electron density, which can be explained by the electron-ion scattering regime. In addition, electron density evolution within plasma was analyzed in an early stage (first 800 fs) of the laser-material interaction.

Impact of surrounding environment evolution on long-term gas flux measurements in a temperate mixed forest

NASA Astrophysics Data System (ADS)

Hurdebise, Quentin; Rixen, Toma; De Ligne, Anne; Vincke, Caroline; Heinesch, Bernard; Aubinet, Marc

2016-04-01

With the development of eddy covariance networks like Fluxnet, ICOS or NEON, long-term data series of carbon dioxide, water vapor and other gas exchanges between terrestrial ecosystems and atmosphere will become more and more numerous. However, long-term analyses of such exchanges require a good understanding of measurement conditions during the investigated period. Independently of climate drivers, measurements may indeed be influenced by measurement conditions themselves subjected to long-term variability due to vegetation growth or set-up changes. The present research refers to the Vielsalm Terrestrial Observatory (VTO) where fluxes of momentum, carbon dioxide, latent and sensible heat have been continuously measured by eddy covariance during twenty years. VTO is an ICOS site installed in a mixed forest (beech, silver fir, Douglas fir, Norway spruce) in the Belgian Ardennes. A multidisciplinary approach was developed in order to investigate the spatial and temporal evolution of several site characteristics: -displacement height (d) and relative measurement height (z-d) were determined using a spectral approach that compared observed and theoretical cospectra; -turbulence statistics were analyzed in the context of Monin-Obukhov similarity theory; -tree height during the measurement period was obtained by combining tree height inventories, a LIDAR survey and tree growth models; -measurement footprint was determined by using a footprint model. A good agreement was found between the three first approaches. Results show notably that z-d was subjected to both temporal and spatial evolution. Temporal evolution resulted from continuous tree growth as well as from a tower raise, achieved in 2009. Spatial evolution, due to canopy heterogeneity, was also observed. The impacts of these changes on measurements are investigated. In particular, it was shown that they affect measurement footprint, flux spectral corrections and flux quality. All these effects must be taken into consideration in order to disentangle long-term flux evolutions due to climate or phenology from changes resulting from measurement set-up changes.

Permeability and permeability anisotropy in Crab Orchard sandstone: Experimental insights into spatio-temporal effects

NASA Astrophysics Data System (ADS)

Gehne, Stephan; Benson, Philip M.

2017-08-01

Permeability in tight crustal rocks is primarily controlled by the connected porosity, shape and orientation of microcracks, the preferred orientation of cross-bedding, and sedimentary features such as layering. This leads to a significant permeability anisotropy. Less well studied, however, are the effects of time and stress recovery on the evolution of the permeability hysteresis which is becoming increasingly important in areas ranging from fluid migration in ore-forming processes to enhanced resource extraction. Here, we report new data simulating spatio-temporal permeability changes induced using effective pressure, simulating burial depth, on a tight sandstone (Crab Orchard). We find an initially (measured at 5 MPa) anisotropy of 2.5% in P-wave velocity and 180% in permeability anisotropy is significantly affected by the direction of the effective pressure change and cyclicity; anisotropy values decrease to 1% and 10% respectively after 3 cycles to 90 MPa and back. Furthermore, we measure a steadily increasing recovery time (10-20 min) for flow parallel to cross-bedding, and a far slower recovery time (20-50 min) for flow normal to cross-bedding. These data are interpreted via strain anisotropy and accommodation models, similar to the "seasoning" process often used in dynamic reservoir extraction.

The Voronoi spatio-temporal data structure

NASA Astrophysics Data System (ADS)

Mioc, Darka

2002-04-01

Current GIS models cannot integrate the temporal dimension of spatial data easily. Indeed, current GISs do not support incremental (local) addition and deletion of spatial objects, and they can not support the temporal evolution of spatial data. Spatio-temporal facilities would be very useful in many GIS applications: harvesting and forest planning, cadastre, urban and regional planning, and emergency planning. The spatio-temporal model that can overcome these problems is based on a topological model---the Voronoi data structure. Voronoi diagrams are irregular tessellations of space, that adapt to spatial objects and therefore they are a synthesis of raster and vector spatial data models. The main advantage of the Voronoi data structure is its local and sequential map updates, which allows us to automatically record each event and performed map updates within the system. These map updates are executed through map construction commands that are composed of atomic actions (geometric algorithms for addition, deletion, and motion of spatial objects) on the dynamic Voronoi data structure. The formalization of map commands led to the development of a spatial language comprising a set of atomic operations or constructs on spatial primitives (points and lines), powerful enough to define the complex operations. This resulted in a new formal model for spatio-temporal change representation, where each update is uniquely characterized by the numbers of newly created and inactivated Voronoi regions. This is used for the extension of the model towards the hierarchical Voronoi data structure. In this model, spatio-temporal changes induced by map updates are preserved in a hierarchical data structure that combines events and corresponding changes in topology. This hierarchical Voronoi data structure has an implicit time ordering of events visible through changes in topology, and it is equivalent to an event structure that can support temporal data without precise temporal information. This formal model of spatio-temporal change representation is currently applied to retroactive map updates and visualization of map evolution. It offers new possibilities in the domains of temporal GIS, transaction processing, spatio-temporal queries, spatio-temporal analysis, map animation and map visualization.

Evolution of microgastropods (Ellobioidea, Carychiidae): integrating taxonomic, phylogenetic and evolutionary hypotheses

PubMed Central

2013-01-01

Background Current biodiversity patterns are considered largely the result of past climatic and tectonic changes. In an integrative approach, we combine taxonomic and phylogenetic hypotheses to analyze temporal and geographic diversification of epigean (Carychium) and subterranean (Zospeum) evolutionary lineages in Carychiidae (Eupulmonata, Ellobioidea). We explicitly test three hypotheses: 1) morphospecies encompass unrecognized evolutionary lineages, 2) limited dispersal results in a close genetic relationship of geographical proximally distributed taxa and 3) major climatic and tectonic events had an impact on lineage diversification within Carychiidae. Results Initial morphospecies assignments were investigated by different molecular delimitation approaches (threshold, ABGD, GMYC and SP). Despite a conservative delimitation strategy, carychiid morphospecies comprise a great number of unrecognized evolutionary lineages. We attribute this phenomenon to historic underestimation of morphological stasis and phenotypic variability amongst lineages. The first molecular phylogenetic hypothesis for the Carychiidae (based on COI, 16S and H3) reveals Carychium and Zospeum to be reciprocally monophyletic. Geographical proximally distributed lineages are often closely related. The temporal diversification of Carychiidae is best described by a constant rate model of diversification. The evolution of Carychiidae is characterized by relatively few (long distance) colonization events. We find support for an Asian origin of Carychium. Zospeum may have arrived in Europe before extant members of Carychium. Distantly related Carychium clades inhabit a wide spectrum of the available bioclimatic niche and demonstrate considerable niche overlap. Conclusions Carychiid taxonomy is in dire need of revision. An inferred wide distribution and variable phenotype suggest underestimated diversity in Zospeum. Several Carychium morphospecies are results of past taxonomic lumping. By collecting populations at their type locality, molecular investigations are able to link historic morphospecies assignments to their respective evolutionary lineage. We propose that rare founder populations initially colonized a continent or cave system. Subsequent passive dispersal into adjacent areas led to in situ pan-continental or mountain range diversifications. Major environmental changes did not influence carychiid diversification. However, certain molecular delimitation methods indicated a recent decrease in diversification rate. We attribute this decrease to protracted speciation. PMID:23343473

Coupling between interface and velocity perturbations in the weakly nonlinear Rayleigh-Taylor instability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, L. F.; Ye, W. H.; He, X. T.

2012-11-15

Weakly nonlinear (WN) Rayleigh-Taylor instability (RTI) initiated by single-mode cosinusoidal interface and velocity perturbations is investigated analytically up to the third order. Expressions of the temporal evolutions of the amplitudes of the first three harmonics are derived. It is shown that there are coupling between interface and velocity perturbations, which plays a prominent role in the WN growth. When the 'equivalent amplitude' of the initial velocity perturbation, which is normalized by its linear growth rate, is compared to the amplitude of the initial interface perturbation, the coupling between them dominates the WN growth of the RTI. Furthermore, the RTI wouldmore » be mitigated by initiating a velocity perturbation with a relative phase shift against the interface perturbation. More specifically, when the phase shift between the interface perturbation and the velocity perturbation is {pi} and their equivalent amplitudes are equal, the RTI could be completely quenched. If the equivalent amplitude of the initial velocity perturbation is equal to the initial interface perturbation, the difference between the WN growth of the RTI initiated by only an interface perturbation and by only a velocity perturbation is found to be asymptotically negligible. The dependence of the WN growth on the Atwood numbers and the initial perturbation amplitudes is discussed. In particular, we investigate the dependence of the saturation amplitude (time) of the fundamental mode on the Atwood numbers and the initial perturbation amplitudes. It is found that the Atwood numbers and the initial perturbation amplitudes play a crucial role in the WN growth of the RTI. Thus, it should be included in applications where the seeds of the RTI have velocity perturbations, such as inertial confinement fusion implosions and supernova explosions.« less

Influence of Initial Correlations on Evolution of a Subsystem in a Heat Bath and Polaron Mobility

NASA Astrophysics Data System (ADS)

Los, Victor F.

2017-08-01

A regular approach to accounting for initial correlations, which allows to go beyond the unrealistic random phase (initial product state) approximation in deriving the evolution equations, is suggested. An exact homogeneous (time-convolution and time-convolutionless) equations for a relevant part of the two-time equilibrium correlation function for the dynamic variables of a subsystem interacting with a boson field (heat bath) are obtained. No conventional approximation like RPA or Bogoliubov's principle of weakening of initial correlations is used. The obtained equations take into account the initial correlations in the kernel governing their evolution. The solution to these equations is found in the second order of the kernel expansion in the electron-phonon interaction, which demonstrates that generally the initial correlations influence the correlation function's evolution in time. It is explicitly shown that this influence vanishes on a large timescale (actually at t→ ∞) and the evolution process enters an irreversible kinetic regime. The developed approach is applied to the Fröhlich polaron and the low-temperature polaron mobility (which was under a long-time debate) is found with a correction due to initial correlations.

Environmental and management impacts on temporal variability of soil hydraulic properties

NASA Astrophysics Data System (ADS)

Bodner, G.; Scholl, P.; Loiskandl, W.; Kaul, H.-P.

2012-04-01

Soil hydraulic properties underlie temporal changes caused by different natural and management factors. Rainfall intensity, wet-dry cycles, freeze-thaw cycles, tillage and plant effects are potential drivers of the temporal variability. For agricultural purposes it is important to determine the possibility of targeted influence via management. In no-till systems e.g. root induced soil loosening (biopores) is essential to counteract natural soil densification by settling. The present work studies two years of temporal evolution of soil hydraulic properties in a no-till crop rotation (durum wheat-field pea) with two cover crops (mustard and rye) having different root systems (taproot vs. fibrous roots) as well as a bare soil control. Soil hydraulic properties such as near-saturated hydraulic conductivity, flow weighted pore radius, pore number and macroporosity are derived from measurements using a tension infiltrometer. The temporal dynamics are then analysed in terms of potential driving forces. Our results revealed significant temporal changes of hydraulic conductivity. When approaching saturation, spatial variability tended to dominate over the temporal evolution. Changes in near-saturated hydraulic conductivity were mainly a result of changing pore number, while the flow weighted mean pore radius showed less temporal dynamic in the no-till system. Macroporosity in the measured range of 0 to -10 cm pressure head ranged from 1.99e-4 to 8.96e-6 m3m-3. The different plant coverage revealed only minor influences on the observed system dynamics. Mustard increased slightly the flow weighted mean pore radius, being 0.090 mm in mustard compared to 0.085 mm in bare soil and 0.084 mm in rye. Still pore radius changes were of minor importance for the overall temporal dynamics. Rainfall was detected as major driving force of the temporal evolution of structural soil hydraulic properties at the site. Soil hydraulic conductivity in the slightly unsaturated range (-7 cm to -10 cm) showed a similar time course as a moving average of rainfall. Drying induced a decrease in conductivity while wetting of the soil resulted in higher conductivity values. Approaching saturation however, the drying phase showed a different behaviour with increasing values of hydraulic conductivity. This may be explained probably by formation of cracks acting as large macropores. We concluded that aggregate coalescence as a function of capillary forces and soil rheologic properties (cf. Or et al., 2002) are a main predictor of temporal dynamics of near saturated soil hydraulic properties while different plant covers only had a minor effect on the observed system dynamics. Or, D., Ghezzehei, T.A. 2002. Modeling post-tillage soil structural dynamics. a review. Soil Till Res. 64, 41-59.

Evolution of Scaling Emergence in Large-Scale Spatial Epidemic Spreading

PubMed Central

Wang, Lin; Li, Xiang; Zhang, Yi-Qing; Zhang, Yan; Zhang, Kan

2011-01-01

Background Zipf's law and Heaps' law are two representatives of the scaling concepts, which play a significant role in the study of complexity science. The coexistence of the Zipf's law and the Heaps' law motivates different understandings on the dependence between these two scalings, which has still hardly been clarified. Methodology/Principal Findings In this article, we observe an evolution process of the scalings: the Zipf's law and the Heaps' law are naturally shaped to coexist at the initial time, while the crossover comes with the emergence of their inconsistency at the larger time before reaching a stable state, where the Heaps' law still exists with the disappearance of strict Zipf's law. Such findings are illustrated with a scenario of large-scale spatial epidemic spreading, and the empirical results of pandemic disease support a universal analysis of the relation between the two laws regardless of the biological details of disease. Employing the United States domestic air transportation and demographic data to construct a metapopulation model for simulating the pandemic spread at the U.S. country level, we uncover that the broad heterogeneity of the infrastructure plays a key role in the evolution of scaling emergence. Conclusions/Significance The analyses of large-scale spatial epidemic spreading help understand the temporal evolution of scalings, indicating the coexistence of the Zipf's law and the Heaps' law depends on the collective dynamics of epidemic processes, and the heterogeneity of epidemic spread indicates the significance of performing targeted containment strategies at the early time of a pandemic disease. PMID:21747932

Water, energy, and biogeochemical budgets investigation at Panola Mountain research watershed, Stockbridge, Georgia; a research plan

USGS Publications Warehouse

Huntington, T.G.; Hooper, R.P.; Peters, N.E.; Bullen, T.D.; Kendall, Carol

1993-01-01

The Panola Mountain Research Watershed (PMRW), located in the Panola Mountain State Conservation Park near Stockbridge, Georgia has been selected as a core research watershed under the Water, Energy and Biogeochemical Budgets (WEBB) research initiative of the U.S. Geological Survey (USGS) Global Climate Change Program. This research plan describes ongoing and planned research activities at PMRW from 1984 to 1994. Since 1984, PMRW has been studied as a geochemical process research site under the U.S. Acid Precipitation Thrust Program. Research conducted under this Thrust Program focused on the estimation of dry atmospheric deposition, short-term temporal variability of streamwater chemistry, sulfate adsorption characteristics of the soils, groundwater chemistry, throughfall chemistry, and streamwater quality. The Acid Precipitation Thrust Program continues (1993) to support data collection and a water-quality laboratory. Proposed research to be supported by the WEBB program is organized in 3 interrelated categories: streamflow generation and water-quality evolution, weathering and geochemical evolution, and regulation of soil-water chemistry. Proposed research on streamflow generation and water-quality evolution will focus on subsurface water movement, its influence in streamflow generation, and the associated chemical changes of the water that take place along its flowpath. Proposed research on weathering and geochemical evolution will identify the sources of cations observed in the streamwater at Panola Mountain and quantify the changes in cation source during storms. Proposed research on regulation of soil-water chemistry will focus on the poorly understood processes that regulate soil-water and groundwater chemistry. (USGS)

A novel way to detect correlations on multi-time scales, with temporal evolution and for multi-variables

NASA Astrophysics Data System (ADS)

Yuan, Naiming; Xoplaki, Elena; Zhu, Congwen; Luterbacher, Juerg

2016-06-01

In this paper, two new methods, Temporal evolution of Detrended Cross-Correlation Analysis (TDCCA) and Temporal evolution of Detrended Partial-Cross-Correlation Analysis (TDPCCA), are proposed by generalizing DCCA and DPCCA. Applying TDCCA/TDPCCA, it is possible to study correlations on multi-time scales and over different periods. To illustrate their properties, we used two climatological examples: i) Global Sea Level (GSL) versus North Atlantic Oscillation (NAO); and ii) Summer Rainfall over Yangtze River (SRYR) versus previous winter Pacific Decadal Oscillation (PDO). We find significant correlations between GSL and NAO on time scales of 60 to 140 years, but the correlations are non-significant between 1865-1875. As for SRYR and PDO, significant correlations are found on time scales of 30 to 35 years, but the correlations are more pronounced during the recent 30 years. By combining TDCCA/TDPCCA and DCCA/DPCCA, we proposed a new correlation-detection system, which compared to traditional methods, can objectively show how two time series are related (on which time scale, during which time period). These are important not only for diagnosis of complex system, but also for better designs of prediction models. Therefore, the new methods offer new opportunities for applications in natural sciences, such as ecology, economy, sociology and other research fields.

Reacquisition of the lower temporal bar in sexually dimorphic fossil lizards provides a rare case of convergent evolution.

PubMed

Simões, Tiago R; Funston, Gregory F; Vafaeian, Behzad; Nydam, Randall L; Doschak, Michael R; Caldwell, Michael W

2016-04-13

Temporal fenestration has long been considered a key character to understand relationships amongst reptiles. In particular, the absence of the lower temporal bar (LTB) is considered one of the defining features of squamates (lizards and snakes). In a re-assessment of the borioteiioid lizard Polyglyphanodon sternbergi (Cretaceous, North America), we detected a heretofore unrecognized ontogenetic series, sexual dimorphism (a rare instance for Mesozoic reptiles), and a complete LTB, a feature only recently recognized for another borioteiioid, Tianyusaurus zhengi (Cretaceous, China). A new phylogenetic analysis (with updates on a quarter of the scorings for P. sternbergi) indicates not only that the LTB was reacquired in squamates, but it happened independently at least twice. An analysis of the functional significance of the LTB using proxies indicates that, unlike for T. zhengi, this structure had no apparent functional advantage in P. sternbergi, and it is better explained as the result of structural constraint release. The observed canalization against a LTB in squamates was broken at some point in the evolution of borioteiioids, whereas never re-occuring in other squamate lineages. This case of convergent evolution involves a mix of both adaptationist and structuralist causes, which is unusual for both living and extinct vertebrates.

Temporal change of EIA asymmetry revealed by a beacon receiver network in Southeast Asia

NASA Astrophysics Data System (ADS)

Watthanasangmechai, Kornyanat; Yamamoto, Mamoru; Saito, Akinori; Maruyama, Takashi; Yokoyama, Tatsuhiro; Nishioka, Michi; Ishii, Mamoru

2015-05-01

To reveal the temporal change of the equatorial ionization anomaly (EIA) asymmetry, a multipoint satellite-ground beacon experiment was conducted along the meridional plane of the Thailand-Indonesia sector. The observation includes one station near the magnetic equator and four stations at off-equator latitudes. This is the first EIA asymmetry study with high spatial resolution using GNU Radio Beacon Receiver (GRBR) observations in Southeast Asia. GRBR-total electron contents (TECs) from 97 polar-orbit satellite passes in March 2012 were analyzed in this study. Successive passes captured rapid evolution of EIA asymmetry, especially during geomagnetic disturbances. The penetrating electric fields that occur during geomagnetic disturbed days are not the cause of the asymmetry. Instead, high background TEC associated with an intense electric field empowers the neutral wind to produce severe asymmetry of the EIA. Such rapid evolution of EIA asymmetry was not seen during nighttime, when meridional wind mainly controlled the asymmetric structures. Additional data are necessary to identify the source of the variations, i.e., atmospheric waves. Precisely capturing the locations of the crests and the evolution of the asymmetry enhances understanding of the temporal change of EIA asymmetry at the local scale and leads to a future local modeling for TEC prediction in Southeast Asia.

Biophysical modeling of the temporal niche: from first principles to the evolution of activity patterns.

PubMed

Levy, Ofir; Dayan, Tamar; Kronfeld-Schor, Noga; Porter, Warren P

2012-06-01

Most mammals can be characterized as nocturnal or diurnal. However infrequently, species may overcome evolutionary constraints and alter their activity patterns. We modeled the fundamental temporal niche of a diurnal desert rodent, the golden spiny mouse, Acomys russatus. This species can shift into nocturnal activity in the absence of its congener, the common spiny mouse, Acomys cahirinus, suggesting that it was competitively driven into diurnality and that this shift in a small desert rodent may involve physiological costs. Therefore, we compared metabolic costs of diurnal versus nocturnal activity using a biophysical model to evaluate the preferred temporal niche of this species. The model predicted that energy expenditure during foraging is almost always lower during the day except during midday in summer at the less sheltered microhabitat. We also found that a shift in summer to foraging in less sheltered microhabitats in response to predation pressure and food availability involves a significant physiological cost moderated by midday reduction in activity. Thus, adaptation to diurnality may reflect the "ghost of competition past"; climate-driven diurnality is an alternative but less likely hypothesis. While climate is considered to play a major role in the physiology and evolution of mammals, this is the first study to model its potential to affect the evolution of activity patterns of mammals.

Reacquisition of the lower temporal bar in sexually dimorphic fossil lizards provides a rare case of convergent evolution

PubMed Central

Simões, Tiago R.; Funston, Gregory F.; Vafaeian, Behzad; Nydam, Randall L.; Doschak, Michael R.; Caldwell, Michael W.

2016-01-01

Temporal fenestration has long been considered a key character to understand relationships amongst reptiles. In particular, the absence of the lower temporal bar (LTB) is considered one of the defining features of squamates (lizards and snakes). In a re-assessment of the borioteiioid lizard Polyglyphanodon sternbergi (Cretaceous, North America), we detected a heretofore unrecognized ontogenetic series, sexual dimorphism (a rare instance for Mesozoic reptiles), and a complete LTB, a feature only recently recognized for another borioteiioid, Tianyusaurus zhengi (Cretaceous, China). A new phylogenetic analysis (with updates on a quarter of the scorings for P. sternbergi) indicates not only that the LTB was reacquired in squamates, but it happened independently at least twice. An analysis of the functional significance of the LTB using proxies indicates that, unlike for T. zhengi, this structure had no apparent functional advantage in P. sternbergi, and it is better explained as the result of structural constraint release. The observed canalization against a LTB in squamates was broken at some point in the evolution of borioteiioids, whereas never re-occuring in other squamate lineages. This case of convergent evolution involves a mix of both adaptationist and structuralist causes, which is unusual for both living and extinct vertebrates. PMID:27071447

Temporal Dynamics of Gully Evolution in a Small, Ephemeral Channel in a Semiarid Watershed

NASA Astrophysics Data System (ADS)

Nichols, Mary; Nearing, Mark

2015-04-01

Incised channels that terminate at a vertical-wall gully heads are common features in semiarid watersheds. The geomorphic evolution of such channels is often dominated by migration of the headwall. The evolution of a headwall in a low order channel on the USDA-ARS Walnut Gulch Experimental Watershed (WGEW) in southeastern Arizona has been monitored since 2004, and since 2012, time-lapse photography has been employed to observe the temporal dynamics at high resolution. A Canon A1300 off the shelf point and shoot digital camera mounted inside a weatherproof Pelican case has been taking 15 mp photographs since 2012. The camera power supply was modified to run from a 12V car battery that was charged with a 25 Watt solar panel through a solar controller. During the runoff season from July through September, images were collected every 30 seconds and the time step was increase to 30 minutes during winter months. The field of view covers the headcut and the immediate surroundings. Runoff events were distinct flash floods in response to high intensity rain. The temporal sequencing of the dominant processes of erosion including mass wasting, plunge pool erosion, and piping are described. In addition, we present a description of the time-lapse camera system with suggestions for future improvements.

Reacquisition of the lower temporal bar in sexually dimorphic fossil lizards provides a rare case of convergent evolution

NASA Astrophysics Data System (ADS)

Simões, Tiago R.; Funston, Gregory F.; Vafaeian, Behzad; Nydam, Randall L.; Doschak, Michael R.; Caldwell, Michael W.

2016-04-01

Temporal fenestration has long been considered a key character to understand relationships amongst reptiles. In particular, the absence of the lower temporal bar (LTB) is considered one of the defining features of squamates (lizards and snakes). In a re-assessment of the borioteiioid lizard Polyglyphanodon sternbergi (Cretaceous, North America), we detected a heretofore unrecognized ontogenetic series, sexual dimorphism (a rare instance for Mesozoic reptiles), and a complete LTB, a feature only recently recognized for another borioteiioid, Tianyusaurus zhengi (Cretaceous, China). A new phylogenetic analysis (with updates on a quarter of the scorings for P. sternbergi) indicates not only that the LTB was reacquired in squamates, but it happened independently at least twice. An analysis of the functional significance of the LTB using proxies indicates that, unlike for T. zhengi, this structure had no apparent functional advantage in P. sternbergi, and it is better explained as the result of structural constraint release. The observed canalization against a LTB in squamates was broken at some point in the evolution of borioteiioids, whereas never re-occuring in other squamate lineages. This case of convergent evolution involves a mix of both adaptationist and structuralist causes, which is unusual for both living and extinct vertebrates.

Temporal-spatial evolution of the hydrologic drought characteristics of the karst drainage basins in South China

NASA Astrophysics Data System (ADS)

He, Zhonghua; Liang, Hong; Yang, Chaohui; Huang, Fasu; Zeng, Xinbo

2018-02-01

Hydrologic drought, as a typical natural phenomenon in the context of global climate change, is the extension and development of meteorological and agricultural droughts, and it is an eventual and extreme drought. This study selects 55 hydrological control basins in Southern China as research areas. The study analyzes features, such as intensity and occurrence frequency of hydrologic droughts, and explores the spatial-temporal evolution patterns in the karst drainage basins in Southern China by virtue of Streamflow Drought Index. Results show that (1) the general hydrologic droughts from 1970s to 2010s exhibited ;an upward trend after having experienced a previous decline; in the karst drainage basins in Southern China; the trend was mainly represented by the gradual alleviation of hydrologic droughts from 1970s to 1990s and the gradual aggravation from 2000s to 2010s. (2) The spatial-temporal evolution pattern of occurrence frequency in the karst drainage basins in Southern China was consistent with the intensity of hydrologic droughts. The periods of 1970s and 2010s exhibited the highest occurrence frequency. (3) The karst drainage basins in Southern China experienced extremely complex variability of hydrologic droughts from 1970s to 2010s. Drought intensity and occurrence frequency significantly vary for different types of hydrology.

Regulation of Viable and Optimal Cohorts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aubin, Jean-Pierre, E-mail: aubin.jp@gmail.com

This study deals with the evolution of (scalar) attributes (resources or income in evolutionary demography or economics, position in traffic management, etc.) of a population of “mobiles” (economic agents, vehicles, etc.). The set of mobiles sharing the same attributes is regarded as an instantaneous cohort described by the number of its elements. The union of instantaneous cohorts during a mobile window between two attributes is a cohort. Given a measure defining the number of instantaneous cohorts, the accumulation of the mobile attributes on a evolving mobile window is the measure of the cohort on this temporal mobile window. Imposing accumulationmore » constraints and departure conditions, this study is devoted to the regulation of the evolutions of the attributes which are1.viable in the sense that the accumulations constraints are satisfied at each instant;2.and, among them, optimal, in the sense that both the duration of the temporal mobile window is maximum and that the accumulation on this temporal mobile window is the largest viable one. This value is the “accumulation valuation” function. Viable and optimal evolutions under accumulation constraints are regulated by an “implicit Volterra integro-differential inclusion” built from the accumulation valuation function, solution to an Hamilton–Jacobi–Bellman partial differential equation under constraints which is constructed for this purpose.« less

Temporal and spatial evolution characteristics of water environment quality in Heze

NASA Astrophysics Data System (ADS)

Gao, Qian; Zhao, Qiang; Li, Xiumei

2018-06-01

The evolution of water environment is relatively complicated. The study of its characteristics is helpful to grasp the general direction of spatial and temporal evolution of water environment in Heze city, and to carry out water resources development and water environment protection more rationally. The comprehensive pollution index method for calculation, and the observed data are handled by Excel. In order to facilitate the analysis of the basin, Arcgis is utilized to map the watershed map. In addition, for the spatial evolution, surfer12 is used to analyze the spatial evolution characteristics the spatial evolution, and to draw the pictures of spatial evolution of chemical oxygen demand and water quality evolution. The study shows that: (1) In Heze, the quality of water environment has been improved year by year from 2006 to 2013. In 2014, the water environment has deteriorated. The content of volatile phenol has increased greatly, and the evolution trend of COD is close to the trend of the comprehensive pollution index. (2) In terms of Spatial state of water environment, the water quality of Zhuzhao New River and Wanfu River is poor, and Dongyu River water quality is better. Zhuzhao New River and Wanfu River water qualityis often worse than grade V or V, and Dongyu River water quality is mostly maintained in the grade Ⅳ. Through the analysis on the spatial revolution characteristics of water quality and chemical oxygen demand(COD),as a result, water quality is poor in the northern region,and the water quality in the southern region is better in Heze. Although the water quality has changed in recent years, the overall pattern is relatively stable.

Consumer-resource interactions and the evolution of migration.

PubMed

Drown, Devin M; Dybdahl, Mark F; Gomulkiewicz, Richard

2013-11-01

Theoretical studies have demonstrated that selection will favor increased migration when fitnesses vary both temporally and spatially, but it is far from clear how pervasive those theoretical conditions are in nature. Although consumer-resource interactions are omnipresent in nature and can generate spatial and temporal variation, it is unknown even in theory whether these dynamics favor the evolution of migration. We develop a mathematical model to address whether and how migration evolves when variability in fitness is determined at least in part by consumer-resource coevolutionary interactions. Our analyses show that such interactions can drive the evolution of migration in the resource, consumer, or both species and thus supplies a general explanation for the pervasiveness of migration. Over short time scales, we show the direction of change in migration rate is determined primarily by the state of local adaptation of the species involved: rates increase when a species is locally maladapted and decrease when locally adapted. Our results reveal that long-term evolutionary trends in migration rates can differ dramatically depending on the strength or weakness of interspecific interactions and suggest an explanation for the evolutionary divergence of migration rates among interacting species. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

The Spatial and Temporal Distribution of SST in the Yellow Sea and the Evolution of the Yellow Sea Warm Current During the Holocene

NASA Astrophysics Data System (ADS)

Jia, Y.; Xiao, X.; Yu, M.; Yuan, Z. N.; Zhang, H.; Zhao, M.

2017-12-01

The Yellow Sea (YS) environment is influenced by both continental and oceanic forcing. The Yellow Sea Warm Current (YSWC) is the most significantly hydrological characteristics of the YS in winter, which is a conduit by which the deep Pacific Ocean influences the YS. Paleo-environmental records are essential for understanding the evolution of the YS environment, especially the spatial distribution of the sea surface temperature (SST) records which can be used to interpret the controlling factors of the YSWC. Previous studies mostly focused on the temporal variation but studies on both temporal and spatial environmental evolution are rather sparse. We used Uk37 temperature records in 9 cores located the north of 35°N in YS to reconstruct the spatial/temporal variations of the SST during the Holocene and further to understand the main natural factors that influenced the evolution of the YS environment and current system. All the SST records in 9 sediment cores displayed the similar trend during the Holocene, showing a regional response to marine environmental variability in the east China Seas influenced by the YSWC. To reconstruct the historical westward shift of the YSWC relative to the bathymetric trough of the YS, we compared SST records of the cores located in the west and east side of the axis of the modern YSWC. The obvious westward shift of the YSWC was observed during the periods of 4500-5000aBP, 2800-3400aBP and 1600-0aBP, especially 1000-0aBP, indicating by the distinctly gradual temperature gradients. The comparison of the East Asian Winter Monsoon(EAWM) and the Kuroshio current intensity records with the SST records revealed that the westward shift of the YSWC might be controlled by the Kuroshio intensity. Our findings have important implications for understanding the mechanisms of the variability of the YSWC.

Constraints on the geomorphological evolution of the nested summit craters of Láscar volcano from high spatio-temporal resolution TerraSAR-X interferometry

NASA Astrophysics Data System (ADS)

Richter, Nicole; Salzer, Jacqueline Tema; de Zeeuw-van Dalfsen, Elske; Perissin, Daniele; Walter, Thomas R.

2018-03-01

Small-scale geomorphological changes that are associated with the formation, development, and activity of volcanic craters and eruptive vents are often challenging to characterize, as they may occur slowly over time, can be spatially localized, and difficult, or dangerous, to access. Using high-spatial and high-temporal resolution synthetic aperture radar (SAR) imagery collected by the German TerraSAR-X (TSX) satellite in SpotLight mode in combination with precise topographic data as derived from Pléiades-1A satellite data, we investigate the surface deformation within the nested summit crater system of Láscar volcano, Chile, the most active volcano of the central Andes. Our aim is to better understand the structural evolution of the three craters that comprise this system, to assess their physical state and dynamic behavior, and to link this to eruptive activity and associated hazards. Using multi-temporal SAR interferometry (MT-InSAR) from ascending and descending orbital geometries, we retrieve the vertical and east-west components of the displacement field. This time series indicates constant rates of subsidence and asymmetric horizontal displacements of all summit craters between June 2012 and July 2014, as well as between January 2015 and March 2017. The vertical and horizontal movements that we observe in the central crater are particularly complex and cannot be explained by any single crater formation mechanism; rather, we suggest that short-term activities superimposed on a combination of ongoing crater evolution processes, including gravitational slumping, cooling and compaction of eruption products, as well as possible piston-like subsidence, are responsible for the small-scale geomorphological changes apparent in our data. Our results demonstrate how high-temporal resolution synthetic aperture radar interferometry (InSAR) time series can add constraints on the geomorphological evolution and structural dynamics of active crater and vent systems at volcanoes worldwide.

On the Assessment of Global Terrestrial Reference Frame Temporal Variations

NASA Astrophysics Data System (ADS)

Ampatzidis, Dimitrios; Koenig, Rolf; Zhu, Shengyuan

2015-04-01

Global Terrestrial Reference Frames (GTRFs) as the International Terrestrial Reference Frame (ITRF) provide reliable 4-D position information (3-D coordinates and their evolution through time). The given 3-D velocities play a significant role in precise position acquisition and are estimated from long term coordinate time series from the space-geodetic techniques DORIS, GNSS, SLR, and VLBI. GTRFs temporal evolution is directly connected with their internal stability: The more intense and inhomogeneous velocity field, the less stable TRF is derived. The assessment of the quality of the GTRF is mainly realized by comparing it to each individual technique's reference frame. E.g the comparison of GTRFs to SLR-only based TRF gives the sense of the ITRF stability with respect to the Geocenter and scale and their associated rates respectively. In addition, the comparison of ITRF to the VLBI-only based TRF can be used for the scale validation. However, till now there is not any specified methodology for the total assessment (in terms of origin, orientation and scale respectively) of the temporal evolution and GTRFs associated accuracy. We present a new alternative diagnostic tool for the assessment of GTRFs temporal evolution based on the well-known time-dependent Helmert type transformation formula (three shifts, three rotations and scale rates respectively). The advantage of the new methodology relies on the fact that it uses the full velocity field of the TRF and therefore all points not just the ones common to different techniques. It also examines simultaneously rates of origin, orientation and scale. The methodology is presented and implemented to the two existing GTRFs on the market (ITRF and DTRF which is computed from DGFI) , the results are discussed. The results also allow to compare directly each GTRF dynamic behavior. Furthermore, the correlations of the estimated parameters can also provide useful information to the proposed GTRFs assessment scheme.

Experimental test of an eco-evolutionary dynamic feedback loop between evolution and population density in the green peach aphid.

PubMed

Turcotte, Martin M; Reznick, David N; Daniel Hare, J

2013-05-01

An eco-evolutionary feedback loop is defined as the reciprocal impacts of ecology on evolutionary dynamics and evolution on ecological dynamics on contemporary timescales. We experimentally tested for an eco-evolutionary feedback loop in the green peach aphid, Myzus persicae, by manipulating initial densities and evolution. We found strong evidence that initial aphid density alters the rate and direction of evolution, as measured by changes in genotype frequencies through time. We also found that evolution of aphids within only 16 days, or approximately three generations, alters the rate of population growth and predicts density compared to nonevolving controls. The impact of evolution on population dynamics also depended on density. In one evolution treatment, evolution accelerated population growth by up to 10.3% at high initial density or reduced it by up to 6.4% at low initial density. The impact of evolution on population growth was as strong as or stronger than that caused by a threefold change in intraspecific density. We found that, taken together, ecological condition, here intraspecific density, alters evolutionary dynamics, which in turn alter concurrent population growth rate (ecological dynamics) in an eco-evolutionary feedback loop. Our results suggest that ignoring evolution in studies predicting population dynamics might lead us to over- or underestimate population density and that we cannot predict the evolutionary outcome within aphid populations without considering population size.

The escalatory Red Queen: Population extinction and replacement following arms race dynamics in poplar rust.

PubMed

Persoons, Antoine; Hayden, Katherine J; Fabre, Bénédicte; Frey, Pascal; De Mita, Stéphane; Tellier, Aurélien; Halkett, Fabien

2017-04-01

Host-parasite systems provide convincing examples of Red Queen co-evolutionary dynamics. Yet, a key process underscored in Van Valen's theory - that arms race dynamics can result in extinction - has never been documented. One reason for this may be that most sampling designs lack the breadth needed to illuminate the rapid pace of adaptation by pathogen populations. In this study, we used a 25-year temporal sampling to decipher the demographic history of a plant pathogen: the poplar rust fungus, Melampsora larici-populina. A major adaptive event occurred in 1994 with the breakdown of R7 resistance carried by several poplar cultivars widely planted in Western Europe since 1982. The corresponding virulence rapidly spread in M. larici-populina populations and nearly reached fixation in northern France, even on susceptible hosts. Using both temporal records of virulence profiles and temporal population genetic data, our analyses revealed that (i) R7 resistance breakdown resulted in the emergence of a unique and homogeneous genetic group, the so-called cultivated population, which predominated in northern France for about 20 years, (ii) selection for Vir7 individuals brought with it multiple other virulence types via hitchhiking, resulting in an overall increase in the population-wide number of virulence types and (iii) - above all - the emergence of the cultivated population superseded the initial population which predominated at the same place before R7 resistance breakdown. Our temporal analysis illustrates how antagonistic co-evolution can lead to population extinction and replacement, hence providing direct evidence for the escalation process which is at the core of Red Queen dynamics. © 2016 John Wiley & Sons Ltd.

The Temporality of Participation in School Science: Coordination of Teacher Control and the Pace of Students' Participation

ERIC Educational Resources Information Center

Rocksén, Miranda

2017-01-01

This study investigates classroom organisation and interaction focusing on phases of activity. The detailed in-depth case study is based on video recordings of 1 science unit consisting of 11 lessons about biological evolution in a Swedish ninth-grade class (aged 15). The study illuminates the temporality of student participation as a fundamental…

High-resolution measurements of the spatial and temporal evolution of megagauss magnetic fields created in intense short-pulse laser-plasma interactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chatterjee, Gourab, E-mail: gourab@tifr.res.in; Singh, Prashant Kumar; Adak, Amitava

A pump-probe polarimetric technique is demonstrated, which provides a complete, temporally and spatially resolved mapping of the megagauss magnetic fields generated in intense short-pulse laser-plasma interactions. A normally incident time-delayed probe pulse reflected from its critical surface undergoes a change in its ellipticity according to the magneto-optic Cotton-Mouton effect due to the azimuthal nature of the ambient self-generated megagauss magnetic fields. The temporal resolution of the magnetic field mapping is typically of the order of the pulsewidth, limited by the laser intensity contrast, whereas a spatial resolution of a few μm is achieved by this optical technique. High-harmonics of themore » probe can be employed to penetrate deeper into the plasma to even near-solid densities. The spatial and temporal evolution of the megagauss magnetic fields at the target front as well as at the target rear are presented. The μm-scale resolution of the magnetic field mapping provides valuable information on the filamentary instabilities at the target front, whereas probing the target rear mirrors the highly complex fast electron transport in intense laser-plasma interactions.« less

Temporal variations in the gene expression levels of cyanobacterial anti-oxidant enzymes through geological history: implications for biological evolution during the Great Oxidation Event

NASA Astrophysics Data System (ADS)

Harada, M.; Furukawa, R.; Yokobori, S. I.; Tajika, E.; Yamagishi, A.

2016-12-01

A significant rise in atmospheric O2 levels during the GOE (Great Oxidation Event), ca. 2.45-2.0 Ga, must have caused a great stress to biosphere, enforcing life to adapt to oxic conditions. Cyanobacteria, oxygenic photosynthetic bacteria that had been responsible for the GOE, are at the same time one of the organisms that would have been greatly affected by the rise of O2 level in the surface environments. Knowledge on the evolution of cyanobacteria is not only important to elucidate the cause of the GOE, but also helps us to better understand the adaptive evolution of life in response to the GOE. Here we performed phylogenetic analysis of an anti-oxidant enzyme Fe-SOD (iron superoxide dismutase) of cyanobacteria, to assess the adaptive evolution of life under the GOE. The rise of O2 level must have increased the level of toxic reactive oxygen species in cyanobacterial cells, thus forced them to change activities or the gene expression levels of Fe-SOD. In the present study, we focus on the change in the gene expression levels of the enzyme, which can be estimated from the promoter sequences of the gene. Promoters are DNA sequences found upstream of protein encoding regions, where RNA polymerase binds and initiates transcription. "Strong" promoters that efficiently interact with RNA polymerase induce high rates of transcription, leading to high levels of gene expression. Thus, from the temporal changes in the promoter sequences, we can estimate the variations in the gene expression levels during the geological time. Promoter sequences of Fe-SOD at each ancestral node of cyanobacteria were predicted from phylogenetic analysis, and the ancestral promoter sequences were compared to the promoters of known highly expressed genes. The similarity was low at the time of the emergence of cyanobacteria; however, increased at the branching nodes diverged 2.4 billon years ago. This roughly coincided with the onset of the GOE, implying that the transition from low to high gene expression levels of Fe-SOD occurred in response to the GOE. We propose that this is the first direct evidence of the evolution of cyanobacteria related to the rise of O2, and that the methodologies of ancestral promoter analysis used in this study can be a novel tools to reveal the biological adaptation to such a significant geologic event.

Individual based simulations of bacterial growth on agar plates

NASA Astrophysics Data System (ADS)

Ginovart, M.; López, D.; Valls, J.; Silbert, M.

2002-03-01

The individual based simulator, INDividual DIScrete SIMulations (INDISIM) has been used to study the behaviour of the growth of bacterial colonies on a finite dish. The simulations reproduce the qualitative trends of pattern formation that appear during the growth of Bacillus subtilis on an agar plate under different initial conditions of nutrient peptone concentration, the amount of agar on the plate, and the temperature. The simulations are carried out by imposing closed boundary conditions on a square lattice divided into square spatial cells. The simulator studies the temporal evolution of the bacterial population possible by setting rules of behaviour for each bacterium, such as its uptake, metabolism and reproduction, as well as rules for the medium in which the bacterial cells grow, such as concentration of nutrient particles and their diffusion. The determining factors that characterize the structure of the bacterial colony patterns in the presents simulations, are the initial concentrations of nutrient particles, that mimic the amount of peptone in the experiments, and the set of values for the microscopic diffusion parameter related, in the experiments, to the amount of the agar medium.

Fast in-situ photoluminescence analysis for a recombination parameterization of the fast BO defect component in silicon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Niewelt, T.; Mägdefessel, S.; Schubert, M. C.

2016-08-28

Light-induced degradation due to BO defects in silicon consists of a fast initial decay within a few seconds followed by a slower decay within hours to days. Determination of injection dependent charge carrier lifetime curves during the initial decay is challenging due to this short timeframe. We have developed a suitable measurement technique based on in situ photoluminescence measurements and present results of our studies of the fast degradation component. The temporal evolution of the recombination activity is studied and assessed by means of a two-level Shockley-Read-Hall statistics. A quadratic dependence of the fast defect activation on the hole concentrationmore » during illumination is demonstrated. We suggest a new parameterization of the recombination activity introduced by fast-formed BO defects featuring energy levels 0.34 eV below the conduction band and 0.31 eV above the valence band. The capture asymmetry ratio determined for the donor level of 18.1 is significantly smaller than previous parameterizations in literature suggest.« less

Unsteady sedimentation of flocculating non-Brownian suspensions

NASA Astrophysics Data System (ADS)

Zinchenko, Alexander

2017-11-01

Microstructural evolution and temporal dynamics of the sedimentation rate U(t) are studied for a monodisperse suspension of non-Brownian spherical particles subject to van der Waals attraction and electrostatic repulsion in the realistic range of colloidal parameters (Hamaker constant, surface potential, double layer thickness etc.). A novel economical high-order multipole algorithm is used to fully resolve hydrodynamical interactions in the dynamical simulations with up to 500 spheres in a periodic box and O(106) time steps, combined with geometry perturbation to incorporate lubrication and extend the solution to arbitrarily small particle separations. The total colloidal force near the secondary minimum often greatly exceeds the effective gravity/buoyancy force, resulting in the formation of strong but flexible bonds and large clusters as the suspension evolves from an initial well-mixed state of non-aggregated spheres. Ensemble averaging over many initial configurations is used to predict U(t) for particle volume fractions between 0.1 and 0.25. The results are fully convergent, system-size independent and cover a 2-2.5 fold growth of U(t) after a latency time.

ULF wave analysis and radial diffusion calculation using a global MHD model for the 17 March 2013 and 2015 storms

NASA Astrophysics Data System (ADS)

Li, Zhao; Hudson, Mary; Patel, Maulik; Wiltberger, Michael; Boyd, Alex; Turner, Drew

2017-07-01

The 17 March 2015 St. Patrick's Day Storm is the largest geomagnetic storm to date of Solar Cycle 24, with a Dst of -223 nT. The magnetopause moved inside geosynchronous orbit under high solar wind dynamic pressure and strong southward interplanetary magnetic field Bz causing loss; however, a subsequent drop in pressure allowed for rapid rebuilding of the radiation belts. The 17 March 2013 storm also shows similar effects on outer zone electrons: first, a rapid dropout due to inward motion of the magnetopause followed by rapid increase in flux above the prestorm level early in the recovery phase and a slow increase over the next 12 days. These phases can be seen in temporal evolution of the electron phase space density measured by the Energetic Particle, Composition, and Thermal Plasma Suite (ECT) instruments on Van Allen Probes. Using the Lyon-Fedder-Mobarry global MHD model driven by upstream solar wind measurements, we simulated both St. Patrick's Day 2013 and 2015 events, analyzing Lyon-Fedder-Mobarry electric and magnetic fields to calculate radial diffusion coefficients. These coefficients have been implemented in a radial diffusion code, using the measured electron phase space density following the local heating as the initial radial profile and outer boundary condition for subsequent temporal evolution over the next 12 days, beginning 18 March. Agreement with electron phase space density at 1000 MeV/G measured by the MagEIS component of the ECT instrument suite on Van Allen Probes was much improved using radial diffusion coefficients from the MHD simulations relative to coefficients parameterized by a global geomagnetic activity index.

Quantification of surface emissions: An historical perspective from GEIA

NASA Astrophysics Data System (ADS)

Granier, C.; Denier Van Der Gon, H.; Doumbia, E. H. T.; Frost, G. J.; Guenther, A. B.; Hassler, B.; Janssens-Maenhout, G. G. A.; Lasslop, G.; Melamed, M. L.; Middleton, P.; Sindelarova, K.; Tarrason, L.; van Marle, M.; W Kaiser, J.; van der Werf, G.

2015-12-01

Assessments of the composition of the atmosphere and its evolution require accurate knowledge of the surface emissions of atmospheric compounds. The first community development of global surface emissions started in 1990, when GEIA was established as a component of the International Global Atmospheric Chemistry (IGAC) project. At that time, GEIA meant "Global Emissions Inventory Activity". Since its inception, GEIA has brought together people to understand emissions from anthropogenic, biomass burning and natural sources. The first goal of GEIA was to establish a "best" inventory for the base year 1985 at 1x1 degree resolution. Since then many inventories have been developed by various groups at the global and regional scale at different temporal and spatial resolutions. GEIA, which now means the "Global Emissions Initiative", has evolved into assessing, harmonizing and distributing emissions datasets. We will review the main achievements of GEIA, and show how the development and evaluation of surface emissions has evolved during the last 25 years. We will discuss the use of surface, in-situ and remote sensing observations to evaluate and improve the quantification of emissions. We will highlight the main uncertainties currently limiting emissions datasets, such as the spatial and temporal evolution of emissions at different resolutions, the quantification of emerging emission sources (such as oil/gas extraction and distribution, biofuels, etc.), the speciation of the emissions of volatile organic compounds and of particulate matter, the capacity building necessary for organizing the development of regional emissions across the world, emissions from shipping, etc. We will present the ECCAD (Emissions of Atmospheric Compounds and Compilation of Ancillary Data) database, developed as part of GEIA to facilitate the access and evaluation of emission inventories.

HST and ground-based observations of bright storms on Uranus during 2014-2015.

NASA Astrophysics Data System (ADS)

Sayanagi, K. M.; Sromovsky, L. A.; Fry, P. M.; De Pater, I.; Hammel, H. B.; Rages, K. A.; Baranec, C.; Delcroix, M.; Wesley, A.; Hueso, R.; Sanchez-Lavega, A.; Simon, A. A.; Wong, M. H.; Orton, G. S.; Irwin, P. G.

2015-12-01

We report the temporal evolution of bright, long-lived cloud features on Uranus. We observed and tracked the features between August 2014 and January 2015 with the Hubble Space Telescope, the Keck 2 10-m telescope, VLT, Gran Telescopio Canarias, Gemini, William Herschel Telescope, Robo-AO, Pic du Midi 1-m telescope, and multiple smaller telescopes operated by amateur astronomers. Surprisingly bright features were first revealed in the Keck adaptive-optics images in August; this initial set of observations motivated follow-up observations around the world. One of the storms (identified as "Feature F" in Sromovsky et al. 2015, and Feature 2 in de Pater et al. 2015), which was the deepest in that dataset, was bright enough that it was detected by multiple amateur observers, permitting us to trigger a Hubble Target of Opportunity (ToO) observation on October 14th, 2014. A complex of features at this latitude was also observed by Hubble as part of the Outer Planet Atmospheres Legacy (OPAL) program on November 8-9, 2014. We will present the temporal evolution of the cloud activities from August 2014 through January 2015, and analyze the vertical structure of the cloud features in the Hubble datasets. The Hubble images used in our study were collected with support of HST grants GO13712 to KMS and GO13937 to AAS. Sromovsky et al. 2015, "High S/N Keck and Gemini AO imaging of Uranus during 2012-2014: New cloud patterns, increasing activity, and improved wind measurements." Icarus 258, 192-223. de Pater et al. 2014, "Record-breaking storm activity on Uranus in 2014." Icarus 252, 121-128

THE KEY ROLE OF SOLAR DYNAMICS IN THE CHROMOSPHERIC HANLE POLARIZATION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlin, E. S.; Bianda, M., E-mail: escarlin@irsol.ch

The quantum theory of polarized light allows one to model scattering in the solar atmosphere for inferring its properties. This powerful approach has revealed two key long-standing problems in solar physics: the puzzling dilemmas between theory and observations in several anomalously polarized spectral lines and the need for inferring the ubiquitous weak chromospheric magnetic fields, which requires discriminating the Hanle effect in dynamic optically thick plasmas. However, the ever-present dynamics, i.e., the temporal evolution of heatings and macroscopic motions, has been widely disregarded when modeling and interpreting the scattering polarization. This has hindered a consistent theoretical solution to the puzzlemore » while falsifying the Hanle diagnosis. Here, we show that the dynamical evolution is a keystone for solving both problems because its systematic impact allows an explanation of the observations from “anomalous” instantaneous polarization signals. Evolution accounted for, we reproduce amplitudes and (spectral and spatial) shapes of the Ca i 4227 Å polarization at solar disk center, identifying a restrictive arrangement of magnetic fields, kinematics, heatings, and spatio-temporal resolution. We find that the joint action of dynamics, Hanle effect, and low temporal resolutions mimics Zeeman linear polarization profiles, the true weak-field Zeeman signals being negligible. Our results allow reinterpretation of many polarization signals of the solar spectra and support time-dependent scattering polarization as a powerful tool for deciphering the spatio-temporal distribution of chromospheric heatings and fields. This approach may be a key aid in developing the Hanle diagnosis for the solar atmosphere.« less

[Spatial-temporal evolution characterization of land subsidence by multi-temporal InSAR method and GIS technology].

PubMed

Chen, Bei-Bei; Gong, Hui-Li; Li, Xiao-Juan; Lei, Kun-Chao; Duan, Guang-Yao; Xie, Jin-Rong

2014-04-01

Long-term over-exploitation of underground resources, and static and dynamic load increase year by year influence the occurrence and development of regional land subsidence to a certain extent. Choosing 29 scenes Envisat ASAR images covering plain area of Beijing, China, the present paper used the multi-temporal InSAR method incorporating both persistent scatterer and small baseline approaches, and obtained monitoring information of regional land subsidence. Under different situation of space development and utilization, the authors chose five typical settlement areas; With classified information of land-use, multi-spectral remote sensing image, and geological data, and adopting GIS spatial analysis methods, the authors analyzed the time series evolution characteristics of uneven settlement. The comprehensive analysis results suggests that the complex situations of space development and utilization affect the trend of uneven settlement; the easier the situation of space development and utilization, the smaller the settlement gradient, and the less the uneven settlement trend.

A stereoscopic system for viewing the temporal evolution of brain activity clusters in response to linguistic stimuli

NASA Astrophysics Data System (ADS)

Forbes, Angus; Villegas, Javier; Almryde, Kyle R.; Plante, Elena

2014-03-01

In this paper, we present a novel application, 3D+Time Brain View, for the stereoscopic visualization of functional Magnetic Resonance Imaging (fMRI) data gathered from participants exposed to unfamiliar spoken languages. An analysis technique based on Independent Component Analysis (ICA) is used to identify statistically significant clusters of brain activity and their changes over time during different testing sessions. That is, our system illustrates the temporal evolution of participants' brain activity as they are introduced to a foreign language through displaying these clusters as they change over time. The raw fMRI data is presented as a stereoscopic pair in an immersive environment utilizing passive stereo rendering. The clusters are presented using a ray casting technique for volume rendering. Our system incorporates the temporal information and the results of the ICA into the stereoscopic 3D rendering, making it easier for domain experts to explore and analyze the data.

Diffusion of external magnetic fields into the cone-in-shell target in the fast ignition

NASA Astrophysics Data System (ADS)

Sunahara, Atsushi; Morita, Hiroki; Johzaki, Tomoyuki; Nagatomo, Hideo; Fujioka, Shinsuke; Hassanein, Ahmed; Firex Project Team

2017-10-01

We simulated the diffusion of externally applied magnetic fields into cone-in-shell target in the fast ignition. Recently, in the fast ignition scheme, the externally magnetic fields up to kilo-Tesla is used to guide fast electrons to the high-dense imploded core. In order to study the profile of the magnetic field, we have developed 2D cylindrical Maxwell equation solver with Ohm's law, and carried out simulations of diffusion of externally applied magnetic fields into a cone-in-shell target. We estimated the conductivity of the cone and shell target based on the assumption of Saha-ionization equilibrium. Also, we calculated the temporal evolution of the target temperature heated by the eddy current driven by temporal variation of magnetic fields, based on the accurate equation of state. Both, the diffusion of magnetic field and the increase of target temperature interact with each other. We present our results of temporal evolution of the magnetic field and its diffusion into the cone and shell target.

Comparing Temporally-Separated Solar Wind Structures at 1 AU (STEREO A and OMNI)

NASA Astrophysics Data System (ADS)

Galvin, A. B.; Farrugia, C. J.; Jian, L. K.

2017-12-01

One may use the longitudinal coverage of different spacecraft assets, or the same asset over sequential Carrington Rotations, to study the solar wind behavior from long-lived structures (coronal holes, active regions), or occasionally observe the extent of transient structures (Farrugia et al., 2011). This is of interest as the evolution of the extent and persistence of interplanetary coronal mass ejections (ICMEs) and of stream interaction regions (SIRs) have implications for space weather forecasting. One challenge is that one must be aware of the temporal evolution of the structure on the Sun and the affect of `sampling' different solar sources due to different solar latitudes of the in-situ spacecraft observations. Here we look at case studies of recent event time intervals during 2015-2017 where solar wind emanating from long-lived coronal-hole structures are observed both at STEREO A and at near-Earth assets (OMNI2). The observations are taken at similar solar latitudes and longitudes but temporally separated by several days or weeks.

Rain radar measurement error estimation using data assimilation in an advection-based nowcasting system

NASA Astrophysics Data System (ADS)

Merker, Claire; Ament, Felix; Clemens, Marco

2017-04-01

The quantification of measurement uncertainty for rain radar data remains challenging. Radar reflectivity measurements are affected, amongst other things, by calibration errors, noise, blocking and clutter, and attenuation. Their combined impact on measurement accuracy is difficult to quantify due to incomplete process understanding and complex interdependencies. An improved quality assessment of rain radar measurements is of interest for applications both in meteorology and hydrology, for example for precipitation ensemble generation, rainfall runoff simulations, or in data assimilation for numerical weather prediction. Especially a detailed description of the spatial and temporal structure of errors is beneficial in order to make best use of the areal precipitation information provided by radars. Radar precipitation ensembles are one promising approach to represent spatially variable radar measurement errors. We present a method combining ensemble radar precipitation nowcasting with data assimilation to estimate radar measurement uncertainty at each pixel. This combination of ensemble forecast and observation yields a consistent spatial and temporal evolution of the radar error field. We use an advection-based nowcasting method to generate an ensemble reflectivity forecast from initial data of a rain radar network. Subsequently, reflectivity data from single radars is assimilated into the forecast using the Local Ensemble Transform Kalman Filter. The spread of the resulting analysis ensemble provides a flow-dependent, spatially and temporally correlated reflectivity error estimate at each pixel. We will present first case studies that illustrate the method using data from a high-resolution X-band radar network.

Regional and temporal variability of melts during a Cordilleran magma pulse: Age and chemical evolution of the jurassic arc, eastern mojave desert, California

USGS Publications Warehouse

Barth, A.P.; Wooden, J.L.; Miller, David; Howard, Keith A.; Fox, Lydia; Schermer, Elizabeth R.; Jacobson, C.E.

2017-01-01

Intrusive rock sequences in the central and eastern Mojave Desert segment of the Jurassic Cordilleran arc of the western United States record regional and temporal variations in magmas generated during the second prominent pulse of Mesozoic continental arc magmatism. U/Pb zircon ages provide temporal control for describing variations in rock and zircon geochemistry that reflect differences in magma source components. These source signatures are discernible through mixing and fractionation processes associated with magma ascent and emplacement. The oldest well-dated Jurassic rocks defining initiation of the Jurassic pulse are a 183 Ma monzodiorite and a 181 Ma ignimbrite. Early to Middle Jurassic intrusive rocks comprising the main stage of magmatism include two high-K calc-alkalic groups: to the north, the deformed 183–172 Ma Fort Irwin sequence and contemporaneous rocks in the Granite and Clipper Mountains, and to the south, the 167–164 Ma Bullion sequence. A Late Jurassic suite of shoshonitic, alkali-calcic intrusive rocks, the Bristol Mountains sequence, ranges in age from 164 to 161 Ma and was emplaced as the pulse began to wane. Whole-rock and zircon trace-element geochemistry defines a compositionally coherent Jurassic arc with regional and secular variations in melt compositions. The arc evolved through the magma pulse by progressively greater input of old cratonic crust and lithospheric mantle into the arc magma system, synchronous with progressive regional crustal thickening.

Irresistible ants: exposure to novel toxic prey increases consumption over multiple temporal scales.

PubMed

Herr, Mark W; Robbins, Travis R; Centi, Alan; Thawley, Christopher J; Langkilde, Tracy

2016-07-01

As species become increasingly exposed to novel challenges, it is critical to understand how evolutionary (i.e., generational) and plastic (i.e., within lifetime) responses work together to determine a species' fate or predict its distribution. The introduction of non-native species imposes novel pressures on the native species that they encounter. Understanding how native species exposed to toxic or distasteful invaders change their feeding behavior can provide insight into their ability to cope with these novel threats as well as broader questions about the evolution of this behavior. We demonstrated that native eastern fence lizards do not avoid consuming invasive fire ants following repeated exposure to this toxic prey. Rather fence lizards increased their consumption of these ants following exposure on three different temporal scales. Lizards ate more fire ants when they were exposed to this toxic prey over successive days. Lizards consumed more fire ants if they had been exposed to fire ants as juveniles 6 months earlier. Finally, lizards from populations exposed to fire ants over multiple generations consumed more fire ants than those from fire ant-free areas. These results suggest that the potentially lethal consumption of fire ants may carry benefits resulting in selection for this behavior, and learning that persists long after initial exposure. Future research on the response of native predators to venomous prey over multiple temporal scales will be valuable in determining the long-term effects of invasion by these novel threats.

Detecting taxonomic and phylogenetic signals in equid cheek teeth: towards new palaeontological and archaeological proxies

NASA Astrophysics Data System (ADS)

Cucchi, T.; Mohaseb, A.; Peigné, S.; Debue, K.; Orlando, L.; Mashkour, M.

2017-04-01

The Plio-Pleistocene evolution of Equus and the subsequent domestication of horses and donkeys remains poorly understood, due to the lack of phenotypic markers capable of tracing this evolutionary process in the palaeontological/archaeological record. Using images from 345 specimens, encompassing 15 extant taxa of equids, we quantified the occlusal enamel folding pattern in four mandibular cheek teeth with a single geometric morphometric protocol. We initially investigated the protocol accuracy by assigning each tooth to its correct anatomical position and taxonomic group. We then contrasted the phylogenetic signal present in each tooth shape with an exome-wide phylogeny from 10 extant equine species. We estimated the strength of the phylogenetic signal using a Brownian motion model of evolution with multivariate K statistic, and mapped the dental shape along the molecular phylogeny using an approach based on squared-change parsimony. We found clear evidence for the relevance of dental phenotypes to accurately discriminate all modern members of the genus Equus and capture their phylogenetic relationships. These results are valuable for both palaeontologists and zooarchaeologists exploring the spatial and temporal dynamics of the evolutionary history of the horse family, up to the latest domestication trajectories of horses and donkeys.

Substorm Current Wedge Revisited

NASA Astrophysics Data System (ADS)

Kepko, L.; McPherron, R. L.; Amm, O.; Apatenkov, S.; Baumjohann, W.; Birn, J.; Lester, M.; Nakamura, R.; Pulkkinen, T. I.; Sergeev, V.

2015-07-01

Almost 40 years ago the concept of the substorm current wedge was developed to explain the magnetic signatures observed on the ground and in geosynchronous orbit during substorm expansion. In the ensuing decades new observations, including radar and low-altitude spacecraft, MHD simulations, and theoretical considerations have tremendously advanced our understanding of this system. The AMPTE/IRM, THEMIS and Cluster missions have added considerable observational knowledge, especially on the important role of fast flows in producing the stresses that generate the substorm current wedge. Recent detailed, multi-spacecraft, multi-instrument observations both in the magnetosphere and in the ionosphere have brought a wealth of new information about the details of the temporal evolution and structure of the current system. While the large-scale picture remains valid, the new details call for revision and an update of the original view. In this paper we briefly review the historical development of the substorm current wedge, review recent in situ and ground-based observations and theoretical work, and discuss the current active research areas. We conclude with a revised, time-dependent picture of the substorm current wedge that follows its evolution from the initial substorm flows through substorm expansion and recovery.

Detecting taxonomic and phylogenetic signals in equid cheek teeth: towards new palaeontological and archaeological proxies

PubMed Central

Mohaseb, A.; Peigné, S.; Debue, K.; Orlando, L.; Mashkour, M.

2017-01-01

The Plio–Pleistocene evolution of Equus and the subsequent domestication of horses and donkeys remains poorly understood, due to the lack of phenotypic markers capable of tracing this evolutionary process in the palaeontological/archaeological record. Using images from 345 specimens, encompassing 15 extant taxa of equids, we quantified the occlusal enamel folding pattern in four mandibular cheek teeth with a single geometric morphometric protocol. We initially investigated the protocol accuracy by assigning each tooth to its correct anatomical position and taxonomic group. We then contrasted the phylogenetic signal present in each tooth shape with an exome-wide phylogeny from 10 extant equine species. We estimated the strength of the phylogenetic signal using a Brownian motion model of evolution with multivariate K statistic, and mapped the dental shape along the molecular phylogeny using an approach based on squared-change parsimony. We found clear evidence for the relevance of dental phenotypes to accurately discriminate all modern members of the genus Equus and capture their phylogenetic relationships. These results are valuable for both palaeontologists and zooarchaeologists exploring the spatial and temporal dynamics of the evolutionary history of the horse family, up to the latest domestication trajectories of horses and donkeys. PMID:28484618

Interaction between lexical and grammatical language systems in the brain

NASA Astrophysics Data System (ADS)

Ardila, Alfredo

2012-06-01

This review concentrates on two different language dimensions: lexical/semantic and grammatical. This distinction between a lexical/semantic system and a grammatical system is well known in linguistics, but in cognitive neurosciences it has been obscured by the assumption that there are several forms of language disturbances associated with focal brain damage and hence language includes a diversity of functions (phoneme discrimination, lexical memory, grammar, repetition, language initiation ability, etc.), each one associated with the activity of a specific brain area. The clinical observation of patients with cerebral pathology shows that there are indeed only two different forms of language disturbances (disturbances in the lexical/semantic system and disturbances in the grammatical system); these two language dimensions are supported by different brain areas (temporal and frontal) in the left hemisphere. Furthermore, these two aspects of the language are developed at different ages during child's language acquisition, and they probably appeared at different historical moments during human evolution. Mechanisms of learning are different for both language systems: whereas the lexical/semantic knowledge is based in a declarative memory, grammatical knowledge corresponds to a procedural type of memory. Recognizing these two language dimensions can be crucial in understanding language evolution and human cognition.

Current-limited electron beam injection

NASA Technical Reports Server (NTRS)

Stenzel, R. L.

1977-01-01

The injection of an electron beam into a weakly collisional, magnetized background plasma was investigated experimentally. The injected beam was energetic and cold, the background plasma was initially isothermal. Beam and plasma dimensions were so large that the system was considered unbounded. The temporal and spatial evolution of the beam-plasma system was dominated by collective effects. High-frequency electrostatic instabilities rapidly thermalized the beam and heated the background electrons. The injected beam current was balanced by a return current consisting of background electrons drifting toward the beam source. The drift between electrons and ions gave rise to an ion acoustic instability which developed into strong three-dimensional turbulence. It was shown that the injected beam current was limited by the return current which is approximately given by the electron saturation current. Non-Maxwellian electron distribution functions were observed.

Microscopic description of exciton polaritons in direct two-band semiconductors

NASA Astrophysics Data System (ADS)

Nguyen, Van Trong; Mahler, Günter

1999-07-01

Based on a quantum electrodynamical formulation, a microscopic description of exciton polaritons in a two-band semiconductor is presented. We show that the interband exchange Coulomb interaction, responsible for the coupling of the exciton with the longitudinal part of the induced field, should be treated on equal footing together with the coupling to the transverse part of the induced field (the photon field). The constitutive relation is established to connect the current density with the total electric field of polaritons. The classical Maxwell equations are derived from the quantum representation of photons to get a closed system of equations. The temporal evolution for an initial excited exciton state is studied in detail and an anisotropic polariton vacuum Rabi splitting is shown to occur. A number of up-to-now unresolved discrepancies in the literature are clarified.

Effects of cavity-cavity interaction on the entanglement dynamics of a generalized double Jaynes-Cummings model

NASA Astrophysics Data System (ADS)

Pandit, Mahasweta; Das, Sreetama; Singha Roy, Sudipto; Shekhar Dhar, Himadri; Sen, Ujjwal

2018-02-01

We consider a generalized double Jaynes-Cummings model consisting of two isolated two-level atoms, each contained in a lossless cavity that interact with each other through a controlled photon-hopping mechanism. We analytically show that at low values of such a mediated cavity-cavity interaction, the temporal evolution of entanglement between the atoms, under the effects of cavity perturbation, exhibits the well-known phenomenon of entanglement sudden death (ESD). Interestingly, for moderately large interaction values, a complete preclusion of ESD is achieved, irrespective of its value in the initial atomic state. Our results provide a model to sustain entanglement between two atomic qubits, under the adverse effect of cavity induced perturbation, by introducing a non-intrusive inter-cavity photon exchange that can be physically realized through cavity-QED setups in contemporary experiments.

Mass-Loss Evolution in the EUV Low Corona from SDO/AIA Data

NASA Astrophysics Data System (ADS)

López, Fernando M.; Hebe Cremades, M.; Nuevo, Federico A.; Balmaceda, Laura A.; Vásquez, Alberto M.

2017-01-01

We carry out an analysis of the mass that is ejected from three coronal dimming regions observed by the Atmospheric Imaging Assembly (AIA) on board the Solar Dynamics Observatory. The three events are unambiguously identified with white-light coronal mass ejections (CMEs) that are associated in turn with surface activity of diverse nature: an impulsive (M-class) flare, a weak (B-class) flare, and a filament eruption without a flare. The use of three AIA coronal passbands allows applying a differential emission measure technique to define the dimming regions and identify their ejected mass through the analysis of the electronic density depletion associated with the eruptions. The temporal evolution of the mass loss from the three dimmings can be approximated by an exponential equation followed by a linear fit. We determine the mass of the associated CMEs from COR2 data. The results show that the ejected masses from the low corona represent a considerable amount of the CME mass. We also find that plasma is still being ejected from the low corona at the time when the CMEs reach the COR2 field of view. The temporal evolution of the angular width of the CMEs, of the dimming regions in the low corona, and of the flux registered by GOES in soft X-rays are all in close relation with the behavior of mass ejection from the low corona. We discuss the implications of our findings toward a better understanding of the temporal evolution of several parameters associated with the analyzed dimmings and CMEs.

Basin scale permeability and thermal evolution of a magmatic hydrothermal system

NASA Astrophysics Data System (ADS)

Taron, J.; Hickman, S. H.; Ingebritsen, S.; Williams, C.

2013-12-01

Large-scale hydrothermal systems are potentially valuable energy resources and are of general scientific interest due to extreme conditions of stress, temperature, and reactive chemistry that can act to modify crustal rheology and composition. With many proposed sites for Enhanced Geothermal Systems (EGS) located on the margins of large-scale hydrothermal systems, understanding the temporal evolution of these systems contributes to site selection, characterization and design of EGS. This understanding is also needed to address the long-term sustainability of EGS once they are created. Many important insights into heat and mass transfer within natural hydrothermal systems can be obtained through hydrothermal modeling assuming that stress and permeability structure do not evolve over time. However, this is not fully representative of natural systems, where the effects of thermo-elastic stress changes, chemical fluid-rock interactions, and rock failure on fluid flow and thermal evolution can be significant. The quantitative importance of an evolving permeability field within the overall behavior of a large-scale hydrothermal system is somewhat untested, and providing such a parametric understanding is one of the goals of this study. We explore the thermal evolution of a sedimentary basin hydrothermal system following the emplacement of a magma body. The Salton Sea geothermal field and its associated magmatic system in southern California is utilized as a general backdrop to define the initial state. Working within the general framework of the open-source scientific computing initiative OpenGeoSys (www.opengeosys.org), we introduce full treatment of thermodynamic properties at the extreme conditions following magma emplacement. This treatment utilizes a combination of standard Galerkin and control-volume finite elements to balance fluid mass, mechanical deformation, and thermal energy with consideration of local thermal non-equilibrium (LTNE) between fluids and solids. Permeability is allowed to evolve under several constitutive models tailored to both porous media and fractures, considering the influence of both mechanical stress and diagenesis. In this first analysis, a relatively simple mechanical model is used; complexity will be added incrementally to represent specific characteristics of the Salton Sea hydrothermal field.

Thermal characteristics of multi-wavelength emission during a B8.3 flare occurred on July 04, 2009

NASA Astrophysics Data System (ADS)

Awasthi, Arun Kumar; Sylwester, Barbara; Sylwester, Janusz; Jain, Rajmal

2015-08-01

We explore the temporal evolution of flare plasma parameters including temperature (T) - differential emission measure (DEM) relationship by analyzing high spectral and temporal cadence X-ray emission in 1.2-20 keV energy band, recorded by SphinX (Polish) and Solar X-ray Spectrometer (SOXS; Indian) instruments, during a B8.3 flare which occurred on July 04, 2009. SphinX records X-ray emission in 1.2-15 keV energy band with the temporal and spectral cadence as good as 6µs and 0.4 keV, respectively. On the other hand, SOXS provides X-ray observations in 4-25 keV energy band with the temporal and spectral resolution of 3s and 0.7 keV, respectively. In addition, we integrate co-temporal EUV line emission in 171, 194 and 284 angstrom obtained from STEREO mission in order to explore low-temperature response to the flare emission. In order to fit observed evolution of multi-wavelength emission during the flare, we incorporate multi-Gaussian and well-established Withbroe - Sylwester maximum likelihood DEM inversion algorithms. Thermal energetics are also estimated using geometrically corrected flaring loop structure obtained through EUV images of the active region from STEREO twin satellites. In addition, we also study the trigger and energy release scenario of this low-intensity class flare in terms of magnetic field as well as multi-wavelength emission.

Directional selection in temporally replicated studies is remarkably consistent.

PubMed

Morrissey, Michael B; Hadfield, Jarrod D

2012-02-01

Temporal variation in selection is a fundamental determinant of evolutionary outcomes. A recent paper presented a synthetic analysis of temporal variation in selection in natural populations. The authors concluded that there is substantial variation in the strength and direction of selection over time, but acknowledged that sampling error would result in estimates of selection that were more variable than the true values. We reanalyze their dataset using techniques that account for the necessary effect of sampling error to inflate apparent levels of variation and show that directional selection is remarkably constant over time, both in magnitude and direction. Thus we cannot claim that the available data support the existence of substantial temporal heterogeneity in selection. Nonetheless, we conject that temporal variation in selection could be important, but that there are good reasons why it may not appear in the available data. These new analyses highlight the importance of applying techniques that estimate parameters of the distribution of selection, rather than parameters of the distribution of estimated selection (which will reflect both sampling error and "real" variation in selection); indeed, despite availability of methods for the former, focus on the latter has been common in synthetic reviews of the aspects of selection in nature, and can lead to serious misinterpretations. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

Using a "time machine" to test for local adaptation of aquatic microbes to temporal and spatial environmental variation.

PubMed

Fox, Jeremy W; Harder, Lawrence D

2015-01-01

Local adaptation occurs when different environments are dominated by different specialist genotypes, each of which is relatively fit in its local conditions and relatively unfit under other conditions. Analogously, ecological species sorting occurs when different environments are dominated by different competing species, each of which is relatively fit in its local conditions. The simplest theory predicts that spatial, but not temporal, environmental variation selects for local adaptation (or generates species sorting), but this prediction is difficult to test. Although organisms can be reciprocally transplanted among sites, doing so among times seems implausible. Here, we describe a reciprocal transplant experiment testing for local adaptation or species sorting of lake bacteria in response to both temporal and spatial variation in water chemistry. The experiment used a -80°C freezer as a "time machine." Bacterial isolates and water samples were frozen for later use, allowing transplantation of older isolates "forward in time" and newer isolates "backward in time." Surprisingly, local maladaptation predominated over local adaptation in both space and time. Such local maladaptation may indicate that adaptation, or the analogous species sorting process, fails to keep pace with temporal fluctuations in water chemistry. This hypothesis could be tested with more finely resolved temporal data. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Long Term Temporal and Spectral Evolution of Point Sources in Nearby Elliptical Galaxies

NASA Astrophysics Data System (ADS)

Durmus, D.; Guver, T.; Hudaverdi, M.; Sert, H.; Balman, Solen

2016-06-01

We present the results of an archival study of all the point sources detected in the lines of sight of the elliptical galaxies NGC 4472, NGC 4552, NGC 4649, M32, Maffei 1, NGC 3379, IC 1101, M87, NGC 4477, NGC 4621, and NGC 5128, with both the Chandra and XMM-Newton observatories. Specifically, we studied the temporal and spectral evolution of these point sources over the course of the observations of the galaxies, mostly covering the 2000 - 2015 period. In this poster we present the first results of this study, which allows us to further constrain the X-ray source population in nearby elliptical galaxies and also better understand the nature of individual point sources.

Transient changes in electric fields induced by interaction of ultraintense laser pulses with insulator and metal foils: Sustainable fields spanning several millimeters

NASA Astrophysics Data System (ADS)

Inoue, Shunsuke; Tokita, Shigeki; Hashida, Masaki; Sakabe, Shuji

2015-04-01

The temporal evolutions of electromagnetic fields generated by the interaction between ultraintense lasers (1.3 ×1018 and 8.2 ×1018W /c m2 ) and solid targets at a distance of several millimeters from the laser-irradiated region have been investigated by electron deflectometry. For three types of foil targets (insulating foil, conductive foil, and insulating foil onto which a metal disk was deposited), transient changes in the fields were observed. We found that the direction, strength, and temporal evolution of the generated fields differ markedly for these three types of targets. The results provide an insight for studying the emission dynamics of laser-accelerated fast electrons.

Temporal Evolution of the Plasma Sheath Surrounding Solar Cells in Low Earth Orbit

NASA Technical Reports Server (NTRS)

Willis, Emily M.; Pour, Maria Z. A.

2017-01-01

High voltage solar array interactions with the space environment can have a significant impact on array performance and spacecraft charging. Over the past 10 years, data from the International Space Station has allowed for detailed observations of these interactions over long periods of time. Some of the surprising observations have been floating potential transients, which were not expected and are not reproduced by existing models. In order to understand the underlying processes producing these transients, the temporal evolution of the plasma sheath surrounding the solar cells in low Earth orbit is being investigated. This study includes lumped element modeling and particle-in-cell simulation methods. This presentation will focus on recent results from the on-going investigations.

Concentration Measurements in Self-Excited Momentum Dominated Low-Density Gas Jets

NASA Technical Reports Server (NTRS)

Yildirim, B. S.; Pasumarthi, K. S.; Agrawal, A. K.

2004-01-01

Flow structure of self-excited, laminar, axisymmetric, momentum-dominated helium jets discharged vertically into ambient air was investigated using high-speed rainbow schlieren deflectometry technique. Measurements were obtained at temporal resolution of 1 ms and spatial resolution of 0.19 mm for two test cases with Richardson number of 0.034 and 0.018. Power spectra revealed that the oscillation frequency was independent of spatial coordinates, suggesting global oscillations in the flow. Abel inversion algorithm was used to reconstruct the concentration field of helium. Instantaneous concentration contours revealed changes in the flow field and evolution of vortical structures during an oscillation cycle. Temporal evolution plots of helium concentration at different axial locations provided detailed information about the instability in the flow field.

Investigation of Kibble-Zurek Quench Dynamics in a Spin-1 Ferromagnetic BEC

NASA Astrophysics Data System (ADS)

Anquez, Martin; Robbins, Bryce; Hoang, Thai; Yang, Xiaoyun; Land, Benjamin; Hamley, Christopher; Chapman, Michael

2014-05-01

We study the temporal evolution of spin populations in small spin-1 87Rb condensates following a slow quench. A ferromagnetic spin-1 BEC exhibits a second-order gapless (quantum) phase transition due to a competition between the magnetic and collisional spin interaction energies. The dynamics of slow quenches through the critical point are predicted to exhibit universal power-law scaling as a function of quench speed. In spatially extended condensates, these excitations are revealed as spatial spin domains. In small condensates, the excitations are manifest in the temporal evolution of the spin populations, illustrating a Kibble-Zurek type scaling. We will present the results of our investigation and compare them to full quantum simulations of the system.

In-hive patterns of temporal polyethism in strains of honey bees (Apis mellifera) with distinct genetic backgrounds.

PubMed

Siegel, Adam J; Fondrk, M Kim; Amdam, Gro V; Page, Robert E

2013-01-01

Honey bee workers exhibit an age-based division of labor (temporal polyethism, DOL). Younger bees transition through sets of tasks within the nest; older bees forage outside. Components of temporal polyethism remain unrevealed. Here, we investigate the timing and pattern of pre-foraging behavior in distinct strains of bees to (1) determine if a general pattern of temporal DOL exists in honey bees, (2) to demonstrate a direct genetic impact on temporal pacing, and (3) to further elucidate the mechanisms controlling foraging initiation. Honey bees selected for differences in stored pollen demonstrate consistent differences in foraging initiation age. Those selected for increased pollen storage (high pollen hoarding strain, HSBs) initiate foraging earlier in life than those selected for decreased pollen storage (low pollen hoarding strain, LSBs). We found that HSBs both initiate and terminate individual pre-foraging tasks earlier than LSBs when housed in a common hive environment. Unselected commercial bees (wild type) generally demonstrated intermediate behavioral timing. There were few differences between genotypes for the proportion of pre-foraging effort dedicated to individual tasks, though total pre-foraging effort differences differed dramatically. This demonstrates that behavioral pacing can be accelerated or slowed, but the pattern of behavior is not fundamentally altered, suggesting a general pattern of temporal behavior in honey bees. This also demonstrates direct genetic control of temporal pacing. Finally, our results suggest that earlier HSB protein (pollen) consumption termination compared to LSBs may contribute to an earlier decline in hemolymph vitellogenin protein titers, which would explain their earlier onset of foraging.

A similarity hypothesis for the two-point correlation tensor in a temporally evolving plane wake

NASA Technical Reports Server (NTRS)

Ewing, D. W.; George, W. K.; Moser, R. D.; Rogers, M. M.

1995-01-01

The analysis demonstrated that the governing equations for the two-point velocity correlation tensor in the temporally evolving wake admit similarity solutions, which include the similarity solutions for the single-point moment as a special case. The resulting equations for the similarity solutions include two constants, beta and Re(sub sigma), that are ratios of three characteristic time scales of processes in the flow: a viscous time scale, a time scale characteristic of the spread rate of the flow, and a characteristic time scale of the mean strain rate. The values of these ratios depend on the initial conditions of the flow and are most likely measures of the coherent structures in the initial conditions. The occurrences of these constants in the governing equations for the similarity solutions indicates that these solutions, in general, will only be the same for two flows if these two constants are equal (and hence the coherent structures in the flows are related). The comparisons between the predictions of the similarity hypothesis and the data presented here and elsewhere indicate that the similarity solutions for the two-point correlation tensors provide a good approximation of the measures of those motions that are not significantly affected by the boundary conditions caused by the finite extent of real flows. Thus, the two-point similarity hypothesis provides a useful tool for both numerical and physical experimentalist that can be used to examine how the finite extent of real flows affect the evolution of the different scales of motion in the flow.

Spatial and temporal evolution of stress and slip rate during the 2000 Tokai slow earthquake

NASA Astrophysics Data System (ADS)

Miyazaki, Shin'ichi; Segall, Paul; McGuire, Jeffery J.; Kato, Teruyuki; Hatanaka, Yuki

2006-03-01

We investigate an ongoing silent thrust event in the Tokai seismic gap along the Suruga-Nankai Trough, central Japan. Prior to the event, continuous GPS data from April 1996 to the end of 1999 show that this region displaced ˜2 cm/yr to the northwest relative to the landward plate. The GPS time series show an abrupt change in rate in mid-June 2000 that continues as of mid-2005. We model this transient deformation, which we refer to as the Tokai slow thrust slip event, as caused by slip on the interface between the Philippine Sea and Amurian plates. The spatial and temporal distribution of slip rate is estimated with Kalman filter based inversion methods. Our inversions reveal two slow subevents. The first initiated in late June 2000 slightly before the Miyake-jima eruption. The locus of slip then propagated southeast in the second half of 2000, with maximum slip rates of about 15 cm/yr through 2001. A second locus of slip initiated to the northeast in early 2001. The depth of the slip zone is about 25 km, which may correspond to the transition zone from a seismogenic to a freely sliding zone. The cumulative moment magnitude of the slow slip event up to November 2002 is Mw ˜ 6.8. We calculate shear stress changes on the plate interface from the slip histories. Stress change as a function of slip rate shows trajectories similar to that inferred for high-speed ruptures; however, the maximum velocity is 8 orders of magnitude less than in normal earthquakes.

Observational aspects of outbursting black hole sources: Evolution of spectro-temporal features and X-ray variability

NASA Astrophysics Data System (ADS)

Sreehari, H.; Nandi, Anuj; Radhika, D.; Iyer, Nirmal; Mandal, Samir

2018-02-01

We report on our attempt to understand the outbursting profile of Galactic Black Hole sources, keeping in mind the evolution of temporal and spectral features during the outburst. We present results of evolution of quasi-periodic oscillations, spectral states and possible connection with jet ejections during the outburst phase. Further, we attempt to connect the observed X-ray variabilities (i.e., `class'/`structured' variabilities, similar to GRS 1915+105) with spectral states of black hole sources. Towards these studies, we consider three black hole sources that have undergone single (XTE J1859+226), a few (IGR J17091-3624) and many (GX 339-4) outbursts since the start of RXTE era. Finally, we model the broadband energy spectra (3-150 keV) of different spectral states using RXTE and NuSTAR observations. Results are discussed in the context of two-component advective flow model, while constraining the mass of the three black hole sources.

Evolution of plant–pollinator mutualisms in response to climate change

PubMed Central

Gilman, R Tucker; Fabina, Nicholas S; Abbott, Karen C; Rafferty, Nicole E

2012-01-01

Climate change has the potential to desynchronize the phenologies of interdependent species, with potentially catastrophic effects on mutualist populations. Phenologies can evolve, but the role of evolution in the response of mutualisms to climate change is poorly understood. We developed a model that explicitly considers both the evolution and the population dynamics of a plant–pollinator mutualism under climate change. How the populations evolve, and thus whether the populations and the mutualism persist, depends not only on the rate of climate change but also on the densities and phenologies of other species in the community. Abundant alternative mutualist partners with broad temporal distributions can make a mutualism more robust to climate change, while abundant alternative partners with narrow temporal distributions can make a mutualism less robust. How community composition and the rate of climate change affect the persistence of mutualisms is mediated by two-species Allee thresholds. Understanding these thresholds will help researchers to identify those mutualisms at highest risk owing to climate change. PMID:25568025

Hydrodynamic Model of Spatio-Temporal Evolution of Two-Plasmon Decay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dimitrijevic, D. R.; Maluckov, A. A.

A hydrodynamic model of two-plasmon decay in a homogeneous plasma slab near the quarter-critical density is constructed in order to gain better insight into the spatio-temporal evolution of the daughter electron plasma waves in plasma in the course of the instability. The influence of laser and plasma parameters on the evolution of the amplitudes of the participating waves is discussed. The secondary coupling of two daughter electron plasma waves with an ion-acoustic wave is assumed to be the principal mechanism of saturation of the instability. The impact of the inherently nonresonant nature of this secondary coupling on the development ofmore » TPD is investigated and it is shown to significantly influence the electron plasma wave dynamics. Its inclusion leads to nonuniformity of the spatial profile of the instability and causes the burst-like pattern of the instability development, which should result in the burst-like hot-electron production in homogeneous plasma.« less

Spatio-temporal Evolution of Velocity Structure, Concentration and Grain-size Stratification within Experimental Particulate Gravity Flows: Potential Input Parameters for Numerical Models

NASA Astrophysics Data System (ADS)

McCaffrey, W.; Choux, C.; Baas, J.; Haughton, P.

2001-12-01

Little is known about the combined spatio-temporal evolution of velocity structure, concentration and grain size stratification within particulate gravity currents. Yet these data are of primary importance for numerical model validation, prior to application to natural flows, such as pyroclastic density currents and turbidity currents. A comprehensive study was carried out on a series of experimental particulate gravity flows of 5% by volume initial concentration. The sediment analogue was polydisperse silica flour (mean grain size ~8 microns). A uniform 30 liter suspension was prepared in an overhead reservoir, then allowed to drain (in about one minute) into an flume 10 m long and 0.3 m wide, water-filled to a depth of 0.3 m. Each flow was siphoned continuously for 52 s at 5 different heights (spaced evenly from 0.6 to 4.6 cm) with samples collected at a frequency of 0.25Hz, generating 325 samples for grain-size and concentration analysis. Simultaneously, six 4-MHz UDVP (Ultrasonic Doppler Velocity Profiling) probes recorded the horizontal component of flow velocity. All but the highest probe were positioned at the same height as the siphons. The sampling location was shifted 1.32m down-current for each of five nominally identical flows, yielding sample locations at 1.32, 2.64, 3.96, 5.28 and 6.60m from the inlet point. These data can be combined to give both the temporal and spatial evolution of a single idealised flow. The concentration data can be used to defined the structure of the flow. The flow first propagated as a jet, then became stratified. The length of the head increased with increasing distance from the reservoir (although the head propagation velocity was uniform). The maximum concentration was located at the base of the flow towards the rear of the head. Grain-size analysis showed that the head was enriched in coarse particles even at the most distal sampling location. Distinct flow stratification developed at a distance between 1.3 m and 2.6 m from the reservoir. In the body of the current, the suspended sediment was normally graded, whereas the tail exhibited inverse grading. This inverse grading may be linked to coarse particles in the head being swept upwards and backwards, then falling back into the body of the current. Alternatively, body turbulence may inhibit the settling of coarse particles. Turbulence may also explain the presence of coarse particles in the flow's head, with turbulence intensity apparently correlated with the flow competence.

Upscaling anomalous reactive kinetics (A+B-->C) from pore scale Lagrangian velocity analysis

NASA Astrophysics Data System (ADS)

De Anna, P.; Tartakovsky, A. M.; Le Borgne, T.; Dentz, M.

2011-12-01

Natural flow fields in porous media display a complex spatio-temporal organization due to heterogeneous geological structures at different scales. This multiscale disorder implies anomalous dispersion, mixing and reaction kinetics (Berkowitz et al. RG 2006, Tartakovsky PRE 2010). Here, we focus on the upscaling of anomalous kinetics arising from pore scale, non Gaussian and correlated, velocity distributions. We consider reactive front simulations, where a component A displaces a component B that saturates initially the porous domain. The reactive component C is produced at the dispersive front located at interface between the A and B domains. The simulations are performed with the SPH method. As the mixing zone grows, the total mass of C produced increases with time. The scaling of this evolution with time is different from that which would be obtained from the homogeneous advection dispersion reaction equation. This anomalous kinetics property is related to spatial structure of the reactive mixture, and its evolution with time under the combined action of advective and diffusive processes. We discuss the different scaling regimes arising depending on the dominant process that governs mixing. In order to upscale these processes, we analyze the Lagrangian velocity properties, which are characterized by the non Gaussian distributions and long range temporal correlation. The main origin of these properties is the existence of very low velocity regions where solute particles can remain trapped for a long time. Another source of strong correlation is the channeling of flow in localized high velocity regions, which created finger-like structures in the concentration field. We show the spatial Markovian, and temporal non Markovian, nature of the Lagrangian velocity field. Therefore, an upscaled model can be defined as a correlated Continuous Time Random Walk (Le Borgne et al. PRL 2008). A key feature of this model is the definition of a transition probability density for Lagrangian velocities across a characteristic correlation distance. We quantify this transition probability density from pore scale simulations and use it in the effective stochastic model. In this framework, we investigate the ability of this effective model to represent correctly dispersion and mixing.

Creep avalanches on San Andreas Fault and their underlying mechanism from 19 years of InSAR and seismicity

NASA Astrophysics Data System (ADS)

Khoshmanesh, M.; Shirzaei, M.

2017-12-01

Recent seismic and geodetic observations indicate that interseismic creep rate varies in both time and space. The spatial extent of creep determines the earthquake potential, while its temporal evolution, known as slow slip events (SSE), may trigger earthquakes. Although the conditions promoting fault creep are well-established, the mechanism for initiating self-sustaining and sometimes cyclic creep events is enigmatic. Here we investigate a time series of 19 years of surface deformation measured by radar interferometry between 1992 and 2011 along the Central San Andreas Fault (CSAF) to constrain the temporal evolution of creep. We show that the creep rate along the CSAF has a sporadic behavior, quantified with a Gumbel-like probability distribution characterized by longer tail toward the extreme positive rates, which is signature of burst-like creep dynamics. Defining creep avalanches as clusters of isolated creep with rates exceeding the shearing rate of tectonic plates, we investigate the statistical properties of their size and length. We show that, similar to the frequency-magnitude distribution of seismic events, the distribution of potency estimated for creep avalanches along the CSAF follows a power law, dictated by the distribution of their along-strike lengths. We further show that an ensemble of concurrent creep avalanches which aseismically rupture isolated fault compartments form the semi-periodic SSEs observed along the CSAF. Using a rate and state friction model, we show that normal stress is temporally variable on the fault, and support this using seismic observations. We propose that, through a self-sustaining fault-valve behavior, compaction induced elevation of pore pressure within hydraulically isolated fault compartments, and subsequent frictional dilation is the cause for the observed episodic SSEs. We further suggest that the 2004 Parkfield Mw6 earthquake may have been triggered by the SSE on adjacent creeping segment, which increased Coulomb failure stress up to 0.45 bar/yr. While creeping segments are suggested to act as barriers and arrest rupture, our study implies that SSEs on these zones may trigger seismic events on adjacent locked parts.

Cancer heterogeneity: converting a limitation into a source of biologic information.

PubMed

Rübben, Albert; Araujo, Arturo

2017-09-08

Analysis of spatial and temporal genetic heterogeneity in human cancers has revealed that somatic cancer evolution in most cancers is not a simple linear process composed of a few sequential steps of mutation acquisitions and clonal expansions. Parallel evolution has been observed in many early human cancers resulting in genetic heterogeneity as well as multilineage progression. Moreover, aneuploidy as well as structural chromosomal aberrations seems to be acquired in a non-linear, punctuated mode where most aberrations occur at early stages of somatic cancer evolution. At later stages, the cancer genomes seem to get stabilized and acquire only few additional rearrangements. While parallel evolution suggests positive selection of driver mutations at early stages of somatic cancer evolution, stabilization of structural aberrations at later stages suggests that negative selection takes effect when cancer cells progressively lose their tolerance towards additional mutation acquisition. Mixing of genetically heterogeneous subclones in cancer samples reduces sensitivity of mutation detection. Moreover, driver mutations present only in a fraction of cancer cells are more likely to be mistaken for passenger mutations. Therefore, genetic heterogeneity may be considered a limitation negatively affecting detection sensitivity of driver mutations. On the other hand, identification of subclones and subclone lineages in human cancers may lead to a more profound understanding of the selective forces which shape somatic cancer evolution in human cancers. Identification of parallel evolution by analyzing spatial heterogeneity may hint to driver mutations which might represent additional therapeutic targets besides driver mutations present in a monoclonal state. Likewise, stabilization of cancer genomes which can be identified by analyzing temporal genetic heterogeneity might hint to genes and pathways which have become essential for survival of cancer cell lineages at later stages of cancer evolution. These genes and pathways might also constitute patient specific therapeutic targets.

Generic patterns in the evolution of urban water networks: Evidence from a large Asian city

NASA Astrophysics Data System (ADS)

Krueger, Elisabeth; Klinkhamer, Christopher; Urich, Christian; Zhan, Xianyuan; Rao, P. Suresh C.

2017-03-01

We examine high-resolution urban infrastructure data using every pipe for the water distribution network (WDN) and sanitary sewer network (SSN) in a large Asian city (≈4 million residents) to explore the structure as well as the spatial and temporal evolution of these infrastructure networks. Network data were spatially disaggregated into multiple subnets to examine intracity topological differences for functional zones of the WDN and SSN, and time-stamped SSN data were examined to understand network evolution over several decades as the city expanded. Graphs were generated using a dual-mapping technique (Hierarchical Intersection Continuity Negotiation), which emphasizes the functional attributes of these networks. Network graphs for WDNs and SSNs are characterized by several network topological metrics, and a double Pareto (power-law) model approximates the node-degree distributions of both water infrastructure networks (WDN and SSN), across spatial and hierarchical scales relevant to urban settings, and throughout their temporal evolution over several decades. These results indicate that generic mechanisms govern the networks' evolution, similar to those of scale-free networks found in nature. Deviations from the general topological patterns are indicative of (1) incomplete establishment of network hierarchies and functional network evolution, (2) capacity for growth (expansion) or densification (e.g., in-fill), and (3) likely network vulnerabilities. We discuss the implications of our findings for the (re-)design of urban infrastructure networks to enhance their resilience to external and internal threats.

Abiotic and biotic dynamics during the initial stages of high solids switchgrass degradation.

PubMed

Fontenelle, L T; Corgie, S C; Walker, L P

2011-07-01

An understanding of the underlying dynamics of how biotic variables drive changes in abiotic parameters in the early stages of biomass biodegradation is essential for better control of the process. Probe hybridization was used to quantitatively study the growth of bacteria, yeast and fungi for three levels of initial moisture content (60, 65 and 75% MC) over a period of 64 h. Changes in abiotic parameters were also documented. By 64 h, samples were significantly differentiated both in temporal and spatial dimension, proving that considerable changes had occurred in these initial stages. Maximum carbon (C) conversion occurred in the 75% MC reactor at a peak value of 49%, with 40% and 37% in the 65 and 60% MC reactors, respectively. Higher temperature, higher pH, higher rates of O2 consumption and CO2 evolution were also observed in the highest moisture reactor; suggesting that of the three MCs studied, 75% MC was the optimal one for the process. MC during the process also proved to be important because it greatly influenced variation in the spatial dimension, further underscoring the importance of characterizing changes with bed height. Most importantly, we were able to positively correlate the rate of substrate degradation with bacterial biomass levels and highlight the critical role of bacteria in biological decomposition.

Photoinitiated Polymerization-Induced Self-Assembly (Photo-PISA): New Insights and Opportunities.

PubMed

Yeow, Jonathan; Boyer, Cyrille

2017-07-01

The polymerization-induced self-assembly (PISA) process is a useful synthetic tool for the efficient synthesis of polymeric nanoparticles of different morphologies. Recently, studies on visible light initiated PISA processes have offered a number of key research opportunities that are not readily accessible using traditional thermally initiated systems. For example, visible light mediated PISA (Photo-PISA) enables a high degree of control over the dispersion polymerization process by manipulation of the wavelength and intensity of incident light. In some cases, the final nanoparticle morphology of a single formulation can be modulated by simple manipulation of these externally controlled parameters. In addition, temporal (and in principle spatial) control over the Photo-PISA process can be achieved in most cases. Exploitation of the mild room temperature polymerizations conditions can enable the encapsulation of thermally sensitive therapeutics to occur without compromising the polymerization rate and their activities. Finally, the Photo-PISA process can enable further mechanistic insights into the morphological evolution of nanoparticle formation such as the effects of temperature on the self-assembly process. The purpose of this mini-review is therefore to examine some of these recent advances that have been made in Photo-PISA processes, particularly in light of the specific advantages that may exist in comparison with conventional thermally initiated systems.

Photoinitiated Polymerization‐Induced Self‐Assembly (Photo‐PISA): New Insights and Opportunities

PubMed Central

Yeow, Jonathan

2017-01-01

The polymerization‐induced self‐assembly (PISA) process is a useful synthetic tool for the efficient synthesis of polymeric nanoparticles of different morphologies. Recently, studies on visible light initiated PISA processes have offered a number of key research opportunities that are not readily accessible using traditional thermally initiated systems. For example, visible light mediated PISA (Photo‐PISA) enables a high degree of control over the dispersion polymerization process by manipulation of the wavelength and intensity of incident light. In some cases, the final nanoparticle morphology of a single formulation can be modulated by simple manipulation of these externally controlled parameters. In addition, temporal (and in principle spatial) control over the Photo‐PISA process can be achieved in most cases. Exploitation of the mild room temperature polymerizations conditions can enable the encapsulation of thermally sensitive therapeutics to occur without compromising the polymerization rate and their activities. Finally, the Photo‐PISA process can enable further mechanistic insights into the morphological evolution of nanoparticle formation such as the effects of temperature on the self‐assembly process. The purpose of this mini‐review is therefore to examine some of these recent advances that have been made in Photo‐PISA processes, particularly in light of the specific advantages that may exist in comparison with conventional thermally initiated systems. PMID:28725534

Determination of Flaw Size and Depth From Temporal Evolution of Thermal Response

NASA Technical Reports Server (NTRS)

Winfree, William P.; Zalameda, Joseph N.; Cramer, Elliott; Howell, Patricia A.

2015-01-01

Simple methods for reducing the pulsed thermographic responses of flaws have tended to be based on either the spatial or temporal response. This independent assessment limits the accuracy of characterization. A variational approach is presented for reducing the thermographic data to produce an estimated size for a flaw that incorporates both the temporal and spatial response to improve the characterization. The size and depth are determined from both the temporal and spatial thermal response of the exterior surface above a flaw and constraints on the length of the contour surrounding the delamination. Examples of the application of the technique to simulation and experimental data acquired are presented to investigate the limitations of the technique.

Spatio-temporally resolved spectral measurements of laser-produced plasma and semiautomated spectral measurement-control and analysis software

NASA Astrophysics Data System (ADS)

Cao, S. Q.; Su, M. G.; Min, Q.; Sun, D. X.; O'Sullivan, G.; Dong, C. Z.

2018-02-01

A spatio-temporally resolved spectral measurement system of highly charged ions from laser-produced plasmas is presented. Corresponding semiautomated computer software for measurement control and spectral analysis has been written to achieve the best synchronicity possible among the instruments. This avoids the tedious comparative processes between experimental and theoretical results. To demonstrate the capabilities of this system, a series of spatio-temporally resolved experiments of laser-produced Al plasmas have been performed and applied to benchmark the software. The system is a useful tool for studying the spectral structures of highly charged ions and for evaluating the spatio-temporal evolution of laser-produced plasmas.

Individual Differences in Memory Search and Their Relation to Intelligence

PubMed Central

Healey, M. Karl; Crutchley, Patrick; Kahana, Michael J.

2014-01-01

Attempts to understand why memory predicts intelligence have not fully leveraged state-of-the-art measures of recall dynamics. Using data from a multi–session free recall study we examine individual differences in measures of recall initiation and post–initiation transitions. We identify four sources of variation: a recency factor reflecting variation in the tendency to initiate recall from an item near the end of the list, a primacy factor reflecting a tendency to initiate from the beginning of the list, a temporal factor corresponding to transitions mediated by temporal associations, and a semantic factor corresponding to semantically–mediated transitions. Together these four factors account for 83% of the variability in overall recall accuracy, suggesting they provide a nearly complete picture of recall dynamics. We also show that these sources of variability account for over 80% of the variance shared between memory and intelligence. The temporal association factor was the most influential in predicting both recall accuracy and intelligence. We outline a theory of how controlled drift of temporal context may be critical across a range of cognitive activities. PMID:24730719

Student Visual Communication of Evolution

NASA Astrophysics Data System (ADS)

Oliveira, Alandeom W.; Cook, Kristin

2017-06-01

Despite growing recognition of the importance of visual representations to science education, previous research has given attention mostly to verbal modalities of evolution instruction. Visual aspects of classroom learning of evolution are yet to be systematically examined by science educators. The present study attends to this issue by exploring the types of evolutionary imagery deployed by secondary students. Our visual design analysis revealed that students resorted to two larger categories of images when visually communicating evolution: spatial metaphors (images that provided a spatio-temporal account of human evolution as a metaphorical "walk" across time and space) and symbolic representations ("icons of evolution" such as personal portraits of Charles Darwin that simply evoked evolutionary theory rather than metaphorically conveying its conceptual contents). It is argued that students need opportunities to collaboratively critique evolutionary imagery and to extend their visual perception of evolution beyond dominant images.

Climatology of convective showers dynamics in a convection-permitting model

NASA Astrophysics Data System (ADS)

Brisson, Erwan; Brendel, Christoph; Ahrens, Bodo

2017-04-01

Convection-permitting simulations have proven their usefulness in improving both the representation of convective rain and the uncertainty range of climate projections. However, most studies have focused on temporal scales greater or equal to convection cell lifetime. A large knowledge gap remains on the model's performance in representing the temporal dynamic of convective showers and how could this temporal dynamic be altered in a warmer climate. In this study, we proposed to fill this gap by analyzing 5-minute convection-permitting model (CPM) outputs. In total, more than 1200 one-day cases are simulated at the resolution of 0.01° using the regional climate model COSMO-CLM over central Europe. The analysis follows a Lagrangian approach and consists of tracking showers characterized by five-minute intensities greater than 20 mm/hour. The different features of these showers (e.g., temporal evolution, horizontal speed, lifetime) are investigated. These features as modeled by an ERA-Interim forced simulation are evaluated using a radar dataset for the period 2004-2010. The model shows good performance in representing most features observed in the radar dataset. Besides, the observed relation between the temporal evolution of precipitation and temperature are well reproduced by the CPM. In a second modeling experiment, the impact of climate change on convective cell features are analyzed based on an EC-Earth RCP8.5 forced simulation for the period 2071-2100. First results show only minor changes in the temporal structure and size of showers. The increase in convective precipitation found in previous studies seems to be mainly due to an increase in the number of convective cells.

The distribution, geochronology and geochemistry of early Paleozoic granitoid plutons in the North Altun orogenic belt, NW China: Implications for the petrogenesis and tectonic evolution

NASA Astrophysics Data System (ADS)

Meng, Ling-Tong; Chen, Bai-Lin; Zhao, Ni-Na; Wu, Yu; Zhang, Wen-Gao; He, Jiang-Tao; Wang, Bin; Han, Mei-Mei

2017-01-01

Abundant early Paleozoic granitoid plutons are widely distributed in the North Altun orogenic belt. These rocks provide clues to the tectonic evolution of the North Altun orogenic belt and adjacent areas. In this paper, we report an integrated study of petrological features, U-Pb zircon dating, in situ zircon Hf isotope and whole-rock geochemical compositions for the Abei, 4337 Highland and Kaladawan Plutons from north to south in the North Altun orogenic belt. The dating yielded magma crystallization ages of 514 Ma for the Abei Pluton, 494 Ma for the 4337 Highland Pluton and 480-460 Ma for the Kaladawan Pluton, suggesting that they are all products of oceanic slab subduction because of the age constraint. The Abei monzogranites derived from the recycle of Paleoproterozoic continental crust under low-pressure and high-temperature conditions are products of subduction initiation. The 4337 Highland granodiorites have some adakitic geochemical signatures and are sourced from partial melting of thickened mafic lower continental crust. The Kaladawan quartz diorites are produced by partial melting of mantle wedge according to the positive εHf(t) values, and the Kaladawan monzogranite-syenogranite are derived from partial melting of Neoproterozoic continental crust mixing the juvenile underplated mafic material from the depleted mantle. These results, together with existing data, provide significant information about the evolution history of oceanic crust subduction during the 520-460 Ma. The initiation of subduction occurred during 520-500 Ma with formation of Abei Pluton; subsequent transition from steep-angle to flat-slab subduction at ca.500 Ma due to the arrival of buoyant oceanic plateaus, which induces the formation of 4337 Highland Pluton. With ongoing subduction, the steep-angle subduction system is reestablished to cause the formation of 480-460 Ma Kaladawan Pluton. Meanwhile, it is this model that account for the temporal-spatial distribution of these early Paleozoic magmatic rocks in the North Altun orogenic belt.

Nonlinear propagation analysis of few-optical-cycle pulses for subfemtosecond compression and carrier envelope phase effect

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mizuta, Yo; Nagasawa, Minoru; Ohtani, Morimasa

2005-12-15

A numerical approach called Fourier direct method (FDM) is applied to nonlinear propagation of optical pulses with the central wavelength 800 nm, the width 2.67-12.00 fs, and the peak power 25-6870 kW in a fused-silica fiber. Bidirectional propagation, delayed Raman response, nonlinear dispersion (self-steepening, core dispersion), as well as correct linear dispersion are incorporated into 'bidirectional propagation equations' which are derived directly from Maxwell's equations. These equations are solved for forward and backward waves, instead of the electric-field envelope as in the nonlinear Schroedinger equation (NLSE). They are integrated as multidimensional simultaneous evolution equations evolved in space. We investigate, bothmore » theoretically and numerically, the validity and the limitation of assumptions and approximations used for deriving the NLSE. Also, the accuracy and the efficiency of the FDM are compared quantitatively with those of the finite-difference time-domain numerical approach. The time-domain size 500 fs and the number of grid points in time 2048 are chosen to investigate numerically intensity spectra, spectral phases, and temporal electric-field profiles up to the propagation distance 1.0 mm. On the intensity spectrum of a few-optical-cycle pulses, the self-steepening, core dispersion, and the delayed Raman response appear as dominant, middle, and slight effects, respectively. The delayed Raman response and the core dispersion reduce the effective nonlinearity. Correct linear dispersion is important since it affects the intensity spectrum sensitively. For the compression of femtosecond optical pulses by the complete phase compensation, the shortness and the pulse quality of compressed pulses are remarkably improved by the intense initial peak power rather than by the short initial pulse width or by the propagation distance longer than 0.1 mm. They will be compressed as short as 0.3 fs below the damage threshold of fused-silica fiber 6 MW. It is demonstrated that the carrier envelope phase (CEP) causes the difference on the temporal electric-field profile and the intensity spectrum for the initial peak power of the order of megawatts. At the propagation distance longer than the coherence length for third-order harmonics, the difference grows in the spectral components around the third-order and higher-order harmonics. The CEP can be a sensitive marker to monitor the evolution of nonlinear optical process by a few-optical-cycle electric-field wave-packet source.« less

Temporal evolution of brain reorganization under cross-modal training: insights into the functional architecture of encoding and retrieval networks

NASA Astrophysics Data System (ADS)

Likova, Lora T.

2015-03-01

This study is based on the recent discovery of massive and well-structured cross-modal memory activation generated in the primary visual cortex (V1) of totally blind people as a result of novel training in drawing without any vision (Likova, 2012). This unexpected functional reorganization of primary visual cortex was obtained after undergoing only a week of training by the novel Cognitive-Kinesthetic Method, and was consistent across pilot groups of different categories of visual deprivation: congenitally blind, late-onset blind and blindfolded (Likova, 2014). These findings led us to implicate V1 as the implementation of the theoretical visuo-spatial 'sketchpad' for working memory in the human brain. Since neither the source nor the subsequent 'recipient' of this non-visual memory information in V1 is known, these results raise a number of important questions about the underlying functional organization of the respective encoding and retrieval networks in the brain. To address these questions, an individual totally blind from birth was given a week of Cognitive-Kinesthetic training, accompanied by functional magnetic resonance imaging (fMRI) both before and just after training, and again after a two-month consolidation period. The results revealed a remarkable temporal sequence of training-based response reorganization in both the hippocampal complex and the temporal-lobe object processing hierarchy over the prolonged consolidation period. In particular, a pattern of profound learning-based transformations in the hippocampus was strongly reflected in V1, with the retrieval function showing massive growth as result of the Cognitive-Kinesthetic memory training and consolidation, while the initially strong hippocampal response during tactile exploration and encoding became non-existent. Furthermore, after training, an alternating patch structure in the form of a cascade of discrete ventral regions underwent radical transformations to reach complete functional specialization in terms of either encoding or retrieval as a function of the stage of learning. Moreover, several distinct patterns of learning-evolution within the patches as a function of their anatomical location, implying a complex reorganization of the object processing sub-networks through the learning period. These first findings of complex patterns of training-based encoding/retrieval reorganization thus have broad implications for a newly emerging view of the perception/memory interactions and their reorganization through the learning process. Note that the temporal evolution of these forms of extended functional reorganization could not be uncovered with conventional assessment paradigms used in the traditional approaches to functional mapping, which may therefore have to be revisited. Moreover, as the present results are obtained in learning under life-long blindness, they imply modality-independent operations, transcending the usual tight association with visual processing. The present approach of memory drawing training in blindness, has the dual-advantage of being both non-visual and causal intervention, which makes it a promising 'scalpel' to disentangle interactions among diverse cognitive functions.

Temporal and spatial evolution of EHD particle flow onset in air in a needle-to-plate negative DC corona discharge

NASA Astrophysics Data System (ADS)

Mizeraczyk, J.; Berendt, A.; Podlinski, J.

2016-05-01

In this paper we present images showing the temporal and spatial evolution of the electrohydrodynamic (EHD) flow of dust particles (cigarette smoke) suspended in still air in a needle-to-plate negative DC corona discharge arrangement just after the corona onset, i.e. in the first stage of development of the EHD particle flow. The experimental apparatus for our study of the EHD flow onset consisted of a needle-to-plate electrode arrangement, high voltage power supply and time-resolved EHD imaging system based on 2D time-resolved particle image velocimetry equipment. The time-resolved flow images clearly show the formation of a ball-like flow structure at the needle tip just after the corona discharge onset, and its evolution into a mushroom-like object moving to the collecting electrode. After a certain time, when the mushroom-like object is still present in the interelectrode gap a second mushroom-like object forms near the needle electrode and starts to move towards the collecting electrode. Before the first mushroom-like object reaches the collecting electrode several similar mushroom-like objects can be formed and presented simultaneously in the interelectrode gap. They look like a series of mushroom-like minijets shot from the needle electrode vicinity towards the collecting electrode. The simultaneous presence of mushroom-like minijets in the interelectrode gap in the corona discharge in particle-seeded air resembles the negative-ion-charged ‘clouds’ (induced by the Trichel pulses) traversing simultaneously the interelectrode gap of the corona discharge in air, predicted a long time ago by Loeb, and Lama and Gallo and recently by Dordizadeh et al. Analysing the time behaviours of the mushroom-like minijets and current waveform in the corona discharge in particle-seeded air, we found that the Trichel pulse trains, formed just after the corona onset initiates the mushroom-like minijets. The first stage of development of the EHD particle flow, the area of which is practically limited to the interelectrode duct, ends when the first mushroom-like minijet reaches the collecting electrode.

EVOLUTIONARY PERSPECTIVES IN A MUTUALISM OF SEPIOLID SQUID AND BIOLUMINESCENT BACTERIA: COMBINED USAGE OF MICROBIAL EXPERIMENTAL EVOLUTION AND TEMPORAL POPULATION GENETICS

PubMed Central

Soto, W.; Punke, E. B.; Nishiguchi, M. K.

2013-01-01

The symbiosis between marine bioluminescent Vibrio bacteria and the sepiolid squid Euprymna is a model for studying animal–bacterial Interactions. Vibrio symbionts native to particular Euprymna species are competitively dominant, capable of outcompeting foreign Vibrio strains from other Euprymna host species. Despite competitive dominance, secondary colonization events by invading nonnative Vibrio fischeri have occurred. Competitive dominance can be offset through superior nonnative numbers and advantage of early start host colonization by nonnatives, granting nonnative vibrios an opportunity to establish beachheads in foreign Euprymna hosts. Here, we show that nonnative V. fischeri are capable of rapid adaptation to novel sepiolid squid hosts by serially passaging V. fischeri JRM200 (native to Hawaiian Euprymna scolopes) lines through the novel Australian squid host E. tasmanica for 500 generations. These experiments were complemented by a temporal population genetics survey of V. fischeri, collected from E. tasmanica over a decade, which provided a perspective from the natural history of V. fischeri evolution over 15,000–20,000 generations in E. tasmanica. No symbiont anagenic evolution within squids was observed, as competitive dominance does not purge V. fischeri genetic diversity through time. Instead, abiotic factors affecting abundance of V. fischeri variants in the planktonic phase sustain temporal symbiont diversity, a property itself of ecological constraints imposed by V. fischeri host adaptation. PMID:22519773

Spatial structure and temporal evolution of energetic particle injections in the inner magnetosphere during the 14 July 2013 substorm event

DOE PAGES

Gkioulidou, Matina; Ohtani, S.; Mitchell, D. G.; ...

2015-03-20

Recent results by the Van Allen Probes mission showed that the occurrence of energetic ion injections inside geosynchronous orbit could be very frequent throughout the main phase of a geomagnetic storm. Understanding, therefore, the formation and evolution of energetic particle injections is critical in order to quantify their effect in the inner magnetosphere. We present a case study of a substorm event that occurred during a weak storm (Dst ~ –40 nT) on 14 July 2013. Van Allen Probe B, inside geosynchronous orbit, observed two energetic proton injections within 10 min, with different dipolarization signatures and duration. The first onemore » is a dispersionless, short-timescale injection pulse accompanied by a sharp dipolarization signature, while the second one is a dispersed, longer-timescale injection pulse accompanied by a gradual dipolarization signature. We combined ground magnetometer data from various stations and in situ particle and magnetic field data from multiple satellites in the inner magnetosphere and near-Earth plasma sheet to determine the spatial extent of these injections, their temporal evolution, and their effects in the inner magnetosphere. Our results indicate that there are different spatial and temporal scales at which injections can occur in the inner magnetosphere and depict the necessity of multipoint observations of both particle and magnetic field data in order to determine these scales.« less

Spatio-temporal Analysis for New York State SPARCS Data

PubMed Central

Chen, Xin; Wang, Yu; Schoenfeld, Elinor; Saltz, Mary; Saltz, Joel; Wang, Fusheng

2017-01-01

Increased accessibility of health data provides unique opportunities to discover spatio-temporal patterns of diseases. For example, New York State SPARCS (Statewide Planning and Research Cooperative System) data collects patient level detail on patient demographics, diagnoses, services, and charges for each hospital inpatient stay and outpatient visit. Such data also provides home addresses for each patient. This paper presents our preliminary work on spatial, temporal, and spatial-temporal analysis of disease patterns for New York State using SPARCS data. We analyzed spatial distribution patterns of typical diseases at ZIP code level. We performed temporal analysis of common diseases based on 12 years’ historical data. We then compared the spatial variations for diseases with different levels of clustering tendency, and studied the evolution history of such spatial patterns. Case studies based on asthma demonstrated that the discovered spatial clusters are consistent with prior studies. We visualized our spatial-temporal patterns as animations through videos. PMID:28815148

A graph-based approach to detect spatiotemporal dynamics in satellite image time series

NASA Astrophysics Data System (ADS)

Guttler, Fabio; Ienco, Dino; Nin, Jordi; Teisseire, Maguelonne; Poncelet, Pascal

2017-08-01

Enhancing the frequency of satellite acquisitions represents a key issue for Earth Observation community nowadays. Repeated observations are crucial for monitoring purposes, particularly when intra-annual process should be taken into account. Time series of images constitute a valuable source of information in these cases. The goal of this paper is to propose a new methodological framework to automatically detect and extract spatiotemporal information from satellite image time series (SITS). Existing methods dealing with such kind of data are usually classification-oriented and cannot provide information about evolutions and temporal behaviors. In this paper we propose a graph-based strategy that combines object-based image analysis (OBIA) with data mining techniques. Image objects computed at each individual timestamp are connected across the time series and generates a set of evolution graphs. Each evolution graph is associated to a particular area within the study site and stores information about its temporal evolution. Such information can be deeply explored at the evolution graph scale or used to compare the graphs and supply a general picture at the study site scale. We validated our framework on two study sites located in the South of France and involving different types of natural, semi-natural and agricultural areas. The results obtained from a Landsat SITS support the quality of the methodological approach and illustrate how the framework can be employed to extract and characterize spatiotemporal dynamics.

Colder environments did not select for a faster metabolism during experimental evolution of Drosophila melanogaster.

PubMed

Alton, Lesley A; Condon, Catriona; White, Craig R; Angilletta, Michael J

2017-01-01

The effect of temperature on the evolution of metabolism has been the subject of debate for a century; however, no consistent patterns have emerged from comparisons of metabolic rate within and among species living at different temperatures. We used experimental evolution to determine how metabolism evolves in populations of Drosophila melanogaster exposed to one of three selective treatments: a constant 16°C, a constant 25°C, or temporal fluctuations between 16 and 25°C. We tested August Krogh's controversial hypothesis that colder environments select for a faster metabolism. Given that colder environments also experience greater seasonality, we also tested the hypothesis that temporal variation in temperature may be the factor that selects for a faster metabolism. We measured the metabolic rate of flies from each selective treatment at 16, 20.5, and 25°C. Although metabolism was faster at higher temperatures, flies from the selective treatments had similar metabolic rates at each measurement temperature. Based on variation among genotypes within populations, heritable variation in metabolism was likely sufficient for adaptation to occur. We conclude that colder or seasonal environments do not necessarily select for a faster metabolism. Rather, other factors besides temperature likely contribute to patterns of metabolic rate over thermal clines in nature. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

The three-dimensional evolution of a plane mixing layer. Part 2: Pairing and transition to turbulence

NASA Technical Reports Server (NTRS)

Moser, Robert D.; Rogers, Michael M.

1992-01-01

The evolution of three-dimensional temporally evolving plane mixing layers through as many as three pairings was simulated numerically. Initial conditions for all simulations consisted of a few low-wavenumber disturbances, usually derived from linear stability theory, in addition to the mean velocity. Three-dimensional perturbations were used with amplitudes ranging from infinitesimal to large enough to trigger a rapid transition to turbulence. Pairing is found both to inhibit the growth of infinitesimal three-dimensional disturbances and to trigger the transition to turbulence in highly three dimensional flows. The mechanisms responsible for the growth of three-dimensionality as well as the initial phases of the transition to turbulence are described. The transition to turbulence is accompanied by the formation of thin sheets of span wise vorticity, which undergo a secondary roll up. Transition also produces an increase in the degree of scalar mixing, in agreement with experimental observations of mixing transition. Simulations were also conducted to investigate changes in span wise length scale that may occur in response to the change in stream wise length scale during a pairing. The linear mechanism for this process was found to be very slow, requiring roughly three pairings to complete a doubling of the span wise scale. Stronger three-dimensionality can produce more rapid scale changes but is also likely to trigger transition to turbulence. No evidence was found for a change from an organized array of rib vortices at one span wise scale to a similar array at a larger span wise scale.

Power Balance Modeling and Validation for ST Startup Using Local Helicity Injection

NASA Astrophysics Data System (ADS)

Barr, J. L.; Bodner, G. M.; Bongard, M. W.; Burke, M. G.; Fonck, R. J.; Hinson, E. T.; Perry, J. M.; Reusch, J. A.; Schlossberg, D. J.

2015-11-01

Local Helicity Injection (LHI) uses localized current injectors for routine Ip<0.18 MA non-solenoidal startup on the Pegasus ST. A power-balance model is under development for predictive Ip t using helicity-balance to quantify LHI's effective current drive, Veff. Analytic formulas for low-A plasma inductance and vertical field are used to account for the inductive effects of dynamic shape evolution. These formulas are being validated against magnetic reconstructions of LHI discharges with varied shape evolutions. Initial results match experimental Ip t within 20 kA with assumed shaping and average resistivity (Spitzer, Te = 60 eV). Geometric effects and inductive drive provide 2.0 V along with Veff = 0.3 V to balance 1.1 V of resistive losses and 1.2 V inductive reactance to ramping Ip. The model is especially sensitive to resistivity when Te<150 eV. Initial Thomson Scattering results give core Te = 72 +/-22 eV, and at times suggest higher central electron energies. Spatial and temporal scans are underway to quantify LHI plasma resistivity and transport. MA-class startup in NSTX-U will require increased area (Ainj >= 40 cm2) LHI systems that play a larger role in current drive than geometric effects, with Veff dropping from >10 V to on-par with inductive effects. This regime is accessed in Pegasus at Ip ≅ 300 kA. Work supported by US DOE grants DE-FG02-96ER54375 and DE-SC0006928.

Damage-Based Time-Dependent Modeling of Paraglacial to Postglacial Progressive Failure of Large Rock Slopes

NASA Astrophysics Data System (ADS)

Riva, Federico; Agliardi, Federico; Amitrano, David; Crosta, Giovanni B.

2018-01-01

Large alpine rock slopes undergo long-term evolution in paraglacial to postglacial environments. Rock mass weakening and increased permeability associated with the progressive failure of deglaciated slopes promote the development of potentially catastrophic rockslides. We captured the entire life cycle of alpine slopes in one damage-based, time-dependent 2-D model of brittle creep, including deglaciation, damage-dependent fluid occurrence, and rock mass property upscaling. We applied the model to the Spriana rock slope (Central Alps), affected by long-term instability after Last Glacial Maximum and representing an active threat. We simulated the evolution of the slope from glaciated conditions to present day and calibrated the model using site investigation data and available temporal constraints. The model tracks the entire progressive failure path of the slope from deglaciation to rockslide development, without a priori assumptions on shear zone geometry and hydraulic conditions. Complete rockslide differentiation occurs through the transition from dilatant damage to a compacting basal shear zone, accounting for observed hydraulic barrier effects and perched aquifer formation. Our model investigates the mechanical role of deglaciation and damage-controlled fluid distribution in the development of alpine rockslides. The absolute simulated timing of rock slope instability development supports a very long "paraglacial" period of subcritical rock mass damage. After initial damage localization during the Lateglacial, rockslide nucleation initiates soon after the onset of Holocene, whereas full mechanical and hydraulic rockslide differentiation occurs during Mid-Holocene, supporting a key role of long-term damage in the reported occurrence of widespread rockslide clusters of these ages.

Imbricated slip rate processes during slow slip transients imaged by low-frequency earthquakes

NASA Astrophysics Data System (ADS)

Lengliné, O.; Frank, W.; Marsan, D.; Ampuero, J. P.

2017-12-01

Low Frequency Earthquakes (LFEs) often occur in conjunction with transient strain episodes, or Slow Slip Events (SSEs), in subduction zones. Their focal mechanism and location consistent with shear failure on the plate interface argue for a model where LFEs are discrete dynamic ruptures in an otherwise slowly slipping interface. SSEs are mostly observed by surface geodetic instruments with limited resolution and it is likely that only the largest ones are detected. The time synchronization of LFEs and SSEs suggests that we could use the recorded LFEs to constrain the evolution of SSEs, and notably of the geodetically-undetected small ones. However, inferring slow slip rate from the temporal evolution of LFE activity is complicated by the strong temporal clustering of LFEs. Here we apply dedicated statistical tools to retrieve the temporal evolution of SSE slip rates from the time history of LFE occurrences in two subduction zones, Mexico and Cascadia, and in the deep portion of the San Andreas fault at Parkfield. We find temporal characteristics of LFEs that are similar across these three different regions. The longer term episodic slip transients present in these datasets show a slip rate decay with time after the passage of the SSE front possibly as t-1/4. They are composed of multiple short term transients with steeper slip rate decay as t-α with α between 1.4 and 2. We also find that the maximum slip rate of SSEs has a continuous distribution. Our results indicate that creeping faults host intermittent deformation at various scales resulting from the imbricated occurrence of numerous slow slip events of various amplitudes.

Imbricated slip rate processes during slow slip transients imaged by low-frequency earthquakes

NASA Astrophysics Data System (ADS)

Lengliné, O.; Frank, W. B.; Marsan, D.; Ampuero, J.-P.

2017-10-01

Low Frequency Earthquakes (LFEs) often occur in conjunction with transient strain episodes, or Slow Slip Events (SSEs), in subduction zones. Their focal mechanism and location consistent with shear failure on the plate interface argue for a model where LFEs are discrete dynamic ruptures in an otherwise slowly slipping interface. SSEs are mostly observed by surface geodetic instruments with limited resolution and it is likely that only the largest ones are detected. The time synchronization of LFEs and SSEs suggests that we could use the recorded LFEs to constrain the evolution of SSEs, and notably of the geodetically-undetected small ones. However, inferring slow slip rate from the temporal evolution of LFE activity is complicated by the strong temporal clustering of LFEs. Here we apply dedicated statistical tools to retrieve the temporal evolution of SSE slip rates from the time history of LFE occurrences in two subduction zones, Mexico and Cascadia, and in the deep portion of the San Andreas fault at Parkfield. We find temporal characteristics of LFEs that are similar across these three different regions. The longer term episodic slip transients present in these datasets show a slip rate decay with time after the passage of the SSE front possibly as t - 1 / 4. They are composed of multiple short term transients with steeper slip rate decay as t-α with α between 1.4 and 2. We also find that the maximum slip rate of SSEs has a continuous distribution. Our results indicate that creeping faults host intermittent deformation at various scales resulting from the imbricated occurrence of numerous slow slip events of various amplitudes.

From dinosaurs to modern bird diversity: extending the time scale of adaptive radiation.

PubMed

Moen, Daniel; Morlon, Hélène

2014-05-01

What explains why some groups of organisms, like birds, are so species rich? And what explains their extraordinary ecological diversity, ranging from large, flightless birds to small migratory species that fly thousand of kilometers every year? These and similar questions have spurred great interest in adaptive radiation, the diversification of ecological traits in a rapidly speciating group of organisms. Although the initial formulation of modern concepts of adaptive radiation arose from consideration of the fossil record, rigorous attempts to identify adaptive radiation in the fossil record are still uncommon. Moreover, most studies of adaptive radiation concern groups that are less than 50 million years old. Thus, it is unclear how important adaptive radiation is over temporal scales that span much larger portions of the history of life. In this issue, Benson et al. test the idea of a "deep-time" adaptive radiation in dinosaurs, compiling and using one of the most comprehensive phylogenetic and body-size datasets for fossils. Using recent phylogenetic statistical methods, they find that in most clades of dinosaurs there is a strong signal of an "early burst" in body-size evolution, a predicted pattern of adaptive radiation in which rapid trait evolution happens early in a group's history and then slows down. They also find that body-size evolution did not slow down in the lineage leading to birds, hinting at why birds survived to the present day and diversified. This paper represents one of the most convincing attempts at understanding deep-time adaptive radiations.

Evolution of Degenerate Space-Time from Non-Degenerate Initial Value in Ashtekar's Formalism

NASA Astrophysics Data System (ADS)

Ma, Yongge; Liang, Canbin

1998-09-01

The possibility of evolving a degenerate space-time from non-degenerate initial value in Ashtekar's formalism is considered in a constructed example. It is found that this possibility could be realized in the time evolution given by Ashtekar's equations, but the topology change of space makes it fail to be a Cauchy evolution.

Phase-field model of domain structures in ferroelectric thin films

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Y. L.; Hu, S. Y.; Liu, Z. K.

A phase-field model for predicting the coherent microstructure evolution in constrained thin films is developed. It employs an analytical elastic solution derived for a constrained film with arbitrary eigenstrain distributions. The domain structure evolution during a cubic{r_arrow}tetragonal proper ferroelectric phase transition is studied. It is shown that the model is able to simultaneously predict the effects of substrate constraint and temperature on the volume fractions of domain variants, domain-wall orientations, domain shapes, and their temporal evolution. {copyright} 2001 American Institute of Physics.

Modeling of the spectral evolution in a narrow-linewidth fiber amplifier

NASA Astrophysics Data System (ADS)

Liu, Wei; Kuang, Wenjun; Jiang, Man; Xu, Jiangming; Zhou, Pu; Liu, Zejin

2016-03-01

Efficient numerical modeling of the spectral evolution in a narrow-linewidth fiber amplifier is presented. By describing the seeds using a statistical model and simulating the amplification process through power balanced equations combined with the nonlinear Schrödinger equations, the spectral evolution of different seeds in the fiber amplifier can be evaluated accurately. The simulation results show that the output spectra are affected by the temporal stability of the seeds and the seeds with constant amplitude in time are beneficial to maintain the linewidth of the seed in the fiber amplifier.

Cellular automata and epidemiological models with spatial dependence

NASA Astrophysics Data System (ADS)

Fuentes, M. A.; Kuperman, M. N.

We present a cellular automata model developed to study the evolution of an infectivity nucleus in several conditions and for two kinds of epidemiologically different diseases. We analyse the role of the model parameters, concerning the epidemiological and demographic aspects of the problem, and of the evolution rules in relation to the spread of such infectious diseases, the arising of periodic temporal modulations related to the infectivity and recovery fronts, and the evolution of travelling waves. Among the obtained results we find analogies to endemic situations and pandemics.

The paradox of HBV evolution as revealed from a 16th century mummy

PubMed Central

Duggan, Ana T.; Poinar, Debi; Poinar, Hendrik N.

2018-01-01

Hepatitis B virus (HBV) is a ubiquitous viral pathogen associated with large-scale morbidity and mortality in humans. However, there is considerable uncertainty over the time-scale of its origin and evolution. Initial shotgun data from a mid-16th century Italian child mummy, that was previously paleopathologically identified as having been infected with Variola virus (VARV, the agent of smallpox), showed no DNA reads for VARV yet did for hepatitis B virus (HBV). Previously, electron microscopy provided evidence for the presence of VARV in this sample, although similar analyses conducted here did not reveal any VARV particles. We attempted to enrich and sequence for both VARV and HBV DNA. Although we did not recover any reads identified as VARV, we were successful in reconstructing an HBV genome at 163.8X coverage. Strikingly, both the HBV sequence and that of the associated host mitochondrial DNA displayed a nearly identical cytosine deamination pattern near the termini of DNA fragments, characteristic of an ancient origin. In contrast, phylogenetic analyses revealed a close relationship between the putative ancient virus and contemporary HBV strains (of genotype D), at first suggesting contamination. In addressing this paradox we demonstrate that HBV evolution is characterized by a marked lack of temporal structure. This confounds attempts to use molecular clock-based methods to date the origin of this virus over the time-frame sampled so far, and means that phylogenetic measures alone cannot yet be used to determine HBV sequence authenticity. If genuine, this phylogenetic pattern indicates that the genotypes of HBV diversified long before the 16th century, and enables comparison of potential pathogenic similarities between modern and ancient HBV. These results have important implications for our understanding of the emergence and evolution of this common viral pathogen. PMID:29300782

Temporal evolution of magma flow and degassing conditions during dome growth, insights from 2D numerical modeling

NASA Astrophysics Data System (ADS)

Chevalier, Laure; Collombet, Marielle; Pinel, Virginie

2017-03-01

Understanding magma degassing evolution during an eruption is essential to improving forecasting of effusive/explosive regime transitions at andesitic volcanoes. Lava domes frequently form during effusive phases, inducing a pressure increase both within the conduit and within the surrounding rocks. To quantify the influence of dome height on magma flow and degassing, we couple magma and gas flow in a 2D numerical model. The deformation induced by magma flow evolution is also quantified. From realistic initial magma flow conditions in effusive regime (Collombet, 2009), we apply increasing pressure at the conduit top as the dome grows. Since volatile solubility increases with pressure, dome growth is then associated with an increase in magma dissolved water content at a given depth, which corresponds with a decrease in magma porosity and permeability. Magma flow evolution is associated with ground deflation of a few μrad in the near field. However this signal is not detectable as it is hidden by dome subsidence (a few mrad). A Darcy flow model is used to study the impact of pressure and permeability conditions on gas flow in the conduit and surrounding rock. We show that dome permeability has almost no influence on magma degassing. However, increasing pressure in the surrounding rock, due to dome loading, as well as decreasing magma permeability in the conduit limit permeable gas loss at the conduit walls, thus causing gas pressurization in the upper conduit by a few tens of MPa. Decreasing magma permeability and increasing gas pressure increase the likelihood of magma explosivity and hazard in the case of a rapid decompression due to dome collapse.

Future Evolution of Marine Heat Waves in the Mediterranean: Coupled Regional Climate Projections

NASA Astrophysics Data System (ADS)

Darmaraki, Sofia; Somot, Samuel; Sevault, Florence; Nabat, Pierre; Cavicchia, Leone; Djurdjevic, Vladimir; Cabos, William; Sein, Dmitry

2017-04-01

FUTURE EVOLUTION OF MARINE HEAT WAVES IN THE MEDITERRANEAN : COUPLED REGIONAL CLIMATE PROJECTIONS The Mediterranean area is identified as a « Hot Spot » region, vulnerable to future climate change with potentially strong impacts over the sea. By 2100, climate models predict increased warming over the sea surface, with possible implications on the Mediterranean thermohaline and surface circulation,associated also with severe impacts on the ecosystems (e.g. fish habitat loss, species extinction and migration, invasive species). However, a robust assesment of the future evolution of the extreme marine temperatures remains still an open issue of primary importance, under the anthropogenic pressure. In this context, we study here the probability and characteristics of marine heat wave (MHW) occurrence in the Mediterranean Sea in future climate projections. To this end, we use an ensemble of fully coupled regional climate system models (RCSM) from the Med- CORDEX initiative. This multi-model approach includes a high-resolution representation of the atmospheric, land and ocean component, with a free air-sea interface.Specifically, dedicated simulations for the 20th and the 21st century are carried out with respect to the different IPCC-AR5 socioeconomic scenarios (1950-2100, RCP8.5, RCP4.5, RCP2.6). Model evaluation for the historical period is performed using satellite and in situ data. Then, the variety of factors that can cause the MHW (e.g. direct radiative forcing, ocean advection, stratification change) are examined to disentangle the dominant driving force. Finally, the spatial variability and temporal evolution of MHW are analyzed on an annual basis, along with additional integrated indicators, useful for marine ecosystems.

A modeling approach for aerosol optical depth analysis during forest fire events

NASA Astrophysics Data System (ADS)

Aube, Martin P.; O'Neill, Normand T.; Royer, Alain; Lavoue, David

2004-10-01

Measurements of aerosol optical depth (AOD) are important indicators of aerosol particle behavior. Up to now the two standard techniques used for retrieving AOD are; (i) sun photometry which provides measurements of high temporal frequency and sparse spatial frequency, and (ii) satellite based approaches such as DDV (Dense Dark Vegetation) based inversion algorithms which yield AOD over dark targets in remotely sensed imagery. Although the latter techniques allow AOD retrieval over appreciable spatial domains, the irregular spatial pattern of dark targets and the typically low repeat frequencies of imaging satellites exclude the acquisition of AOD databases on a continuous spatio-temporal basis. We attempt to fill gaps in spatio-temporal AOD measurements using a new assimilation methodology that links AOD measurements and the predictions of a particulate matter Transport Model. This modelling package (AODSEM V2.0 for Aerosol Optical Depth Spatio-temporal Evolution Model) uses a size and aerosol type segregated semi-Lagrangian trajectory algorithm driven by analysed meteorological data. Its novelty resides in the fact that the model evolution may be tied to both ground based and satellite level AOD measurement and all physical processes have been optimized to track this important and robust parameter. We applied this methodology to a significant smoke event that occurred over the eastern part of North America in July 2002.

Dynamics of quantum correlation and coherence for two atoms coupled with a bath of fluctuating massless scalar field

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huang, Zhiming, E-mail: 465609785@qq.com; Situ, Haozhen, E-mail: situhaozhen@gmail.com

In this article, the dynamics of quantum correlation and coherence for two atoms interacting with a bath of fluctuating massless scalar field in the Minkowski vacuum is investigated. We firstly derive the master equation that describes the system evolution with initial Bell-diagonal state. Then we discuss the system evolution for three cases of different initial states: non-zero correlation separable state, maximally entangled state and zero correlation state. For non-zero correlation initial separable state, quantum correlation and coherence can be protected from vacuum fluctuations during long time evolution when the separation between the two atoms is relatively small. For maximally entangledmore » initial state, quantum correlation and coherence overall decrease with evolution time. However, for the zero correlation initial state, quantum correlation and coherence are firstly generated and then drop with evolution time; when separation is sufficiently small, they can survive from vacuum fluctuations. For three cases, quantum correlation and coherence first undergo decline and then fluctuate to relatively stable values with the increasing distance between the two atoms. Specially, for the case of zero correlation initial state, quantum correlation and coherence occur periodically revival at fixed zero points and revival amplitude declines gradually with increasing separation of two atoms.« less

Effect of fluid penetration on tensile failure during fracturing of an open-hole wellbore

NASA Astrophysics Data System (ADS)

Zeng, Fanhui; Cheng, Xiaozhao; Guo, Jianchun; Chen, Zhangxin; Tao, Liang; Liu, Xiaohua; Jiang, Qifeng; Xiang, Jianhua

2018-06-01

It is widely accepted that a fracture can be induced at a wellbore surface when the fluid pressure overcomes the rock tensile strength. However, few models of this phenomenon account for the fluid penetration effect. A rock is a typical permeable, porous medium, and the transmission of pressure from a wellbore to the surrounding rock temporally and spatially perturbs the effective stresses. In addition, these induced stresses influence the fracture initiation pressure. To gain a better understanding of the penetration effect on the initiation pressure of a permeable formation, a comprehensive formula is presented to study the effects of the in situ stresses, rock mechanical properties, injection rate, rock permeability, fluid viscosity, fluid compressibility and wellbore size on the magnitude of the initiation pressure during fracturing of an open-hole wellbore. In this context, the penetration effect is treated as a consequence of the interaction among these parameters by using Darcy’s law of radial flow. A fully coupled analytical procedure is developed to show how the fracturing fluid infiltrates the rock around the wellbore and considerably reduces the magnitude of the initiation pressure. Moreover, the calculation results are validated by hydraulic fracturing experiments in hydrostone. An exhaustive sensitivity study is performed, indicating that the local fluid pressure induced from a seepage effect strongly influences the fracture evolution. For permeable reservoirs, a low injection rate and a low viscosity of the injected fluid have a significant impact on the fracture initiation pressure. In this case, the Hubbert and Haimson equations to predict the fracture initiation pressure are not valid. The open-hole fracture initiation pressure increases with the fracturing fluid viscosity and fluid compressibility, while it decreases as the rock permeability, injection rate and wellbore size increase.

Factors controlling the spatio-temporal distribution of the 2009 Chattonella antiqua bloom in the Yatsushiro Sea, Japan

NASA Astrophysics Data System (ADS)

Aoki, Kazuhiro; Onitsuka, Goh; Shimizu, Manabu; Kuroda, Hiroshi; Matsuyama, Yukihiko; Kimoto, Katsunori; Matsuo, Hitoshi; Kitadai, Yuuki; Sakurada, Kiyonari; Nishi, Hiromi; Tahara, Yoshio

2012-12-01

A harmful bloom due to the raphidophycean flagellate, Chattonella antiqua, was found in the Yatsushiro Sea, western Kyushu, Japan, from the end of July to the beginning of August 2009. The bloom resulted in enormous economic damage to cultured finfish production in aquaculture farms concentrated in the southwestern area. To investigate the factors controlling the spatio-temporal distribution of the bloom, data analysis and numerical simulations were conducted using field monitoring data and a three-dimensional hydrodynamic model coupled to a Lagrangian particle-tracking model. Results of the monitoring data analysis showed that the initial development of the C. antiqua bloom occurred in Kusuura Bay and the northeastern area near the mouth of the Kuma River, and subsequently the bloom expanded rapidly to the whole area. The simulation results indicated that the source region of the widespread bloom was not Kusuura Bay but the northeastern area. The southwestward evolution of the bloom was primarily controlled by the passive transport due to the surface residual current driven by fresh water discharge from the Kuma River and northeasterly winds. On the favorable conditions of river discharge and wind, the massive bloom of C. antiqua that formed in the northeastern area was quickly transported southwestward within a few days.

A Survey of Phase Space Density Radial Distribution of Relativistic Electrons During a 2-year Time Period (2001-2002)

NASA Astrophysics Data System (ADS)

Chen, Y.; Reeves, G.; Friedel, R. H.

2005-12-01

The source of relativistic electrons in the Earth's radiation belts in recovery phase of geomagnetic storms is still an open question which requires more observational analysis. To address this question, we first need to differentiate between two competing mechanisms, inward radial transport or in-situ energization. Recent work has focused on analysis of phase space density distribution for specific storms of interest. Here we expand on the results of earlier event studies by surveying the phase space density radial distribution and its temporal evolution during storms for a time period of 2 years (2001-2002). Data in this work are from the IES and HIST electron detectors on board POLAR, whose orbit crosses the outer part of outer radiation belt through equatorial plane almost every 18 hours during this period. The fact that detected electrons with given 1st and 2nd adiabatic invariants can cover L*~6-10, allows tracing the temporally evolving radial gradient which can help in determining the source of new electrons. Initial analysis of approximately 190 days suggests that the energization of relativistic electrons may result from a more complicated combination of radial transport and in-situ acceleration than is usually assumed.

Spatial and temporal patterns of airflow across a foredune and beach surface under offshore winds: implications for aeolian sediment transport

NASA Astrophysics Data System (ADS)

Jackson, D.; Delgado-Fernandez, I.; Lynch, K.; Baas, A. C.; Cooper, J. A.; Beyers, M.

2010-12-01

The input of aeolian sediment into foredune systems from beaches represents a key component of sediment budget analysis along many soft sedimentary coastlines. Where there are significant offshore wind components in local wind regimes this is normally excluded from analysis. However, recent work has shown that if the topography of the foredune is favourable then this offshore component is steered or undergoes flow reversal through leeside eddying to give onshore transport events at the back beach under offshore flow conditions. At particular distances from the foredune crest flow reattaches to the surface to continue its incident offshore direction. The location of this reattachment point has important implications for aeolian transport of sand on the back beach and foredune toe locations. This study reports initial results where the positioning of the reattachment point is mobile and is driven by incident wind velocity (at the foredune crest) and the actual undulations of the foredune crest’s topography, dictating heterogeneous flow behaviour at the beach. Using detailed field measurements (25 Hz, three-dimensional sonic anemometry) and computational fluid dynamic modelling, a temporal and spatial pattern of reattachment positions are described. Implications for aeolian transport and dune evolution are also examined.

Acoustic wave propagation in a temporal evolving shear-layer for low-Mach number perturbations

NASA Astrophysics Data System (ADS)

Hau, Jan-Niklas; Müller, Björn

2018-01-01

We study wave packets with the small perturbation/gradient Mach number interacting with a smooth shear-layer in the linear regime of small amplitude perturbations. In particular, we investigate the temporal evolution of wave packets in shear-layers with locally curved regions of variable size using non-modal linear analysis and direct numerical simulations of the two-dimensional gas-dynamical equations. Depending on the wavenumber of the initially imposed wave packet, three different types of behavior are observed: (i) The wave packet passes through the shear-layer and constantly transfers energy back to the mean flow. (ii) It is turned around (or reflected) within the sheared region and extracts energy from the base flow. (iii) It is split into two oppositely propagating packages when reaching the upper boundary of the linearly sheared region. The conducted direct numerical simulations confirm that non-modal linear stability analysis is able to predict the wave packet dynamics, even in the presence of non-linearly sheared regions. In the light of existing studies in this area, we conclude that the sheared regions are responsible for the highly directed propagation of linearly generated acoustic waves when there is a dominating source, as it is the case for jet flows.

Closed form unsupervised registration of multi-temporal structure from motion-multiview stereo data using non-linearly weighted image features

NASA Astrophysics Data System (ADS)

Seers, T. D.; Hodgetts, D.

2013-12-01

Seers, T. D. & Hodgetts, D. School of Earth, Atmospheric and Environmental Sciences, University of Manchester, UK. M13 9PL. The detection of topological change at the Earth's surface is of considerable scholarly interest, allowing the quantification of the rates of geomorphic processes whilst providing lucid insights into the underlying mechanisms driving landscape evolution. In this regard, the past decade has witnessed the ever increasing proliferation of studies employing multi-temporal topographic data in within the geosciences, bolstered by continuing technical advancements in the acquisition and processing of prerequisite datasets. Provided by workers within the field of Computer Vision, multiview stereo (MVS) dense surface reconstructions, primed by structure-from-motion (SfM) based camera pose estimation represents one such development. Providing a cost effective, operationally efficient data capture medium, the modest requirement of a consumer grade camera for data collection coupled with the minimal user intervention required during post-processing makes SfM-MVS an attractive alternative to terrestrial laser scanners for collecting multi-temporal topographic datasets. However, in similitude to terrestrial scanner derived data, the co-registration of spatially coincident or partially overlapping scans produced by SfM-MVS presents a major technical challenge, particularly in the case of semi non-rigid scenes produced during topographic change detection studies. Moreover, the arbitrary scaling resulting from SfM ambiguity requires that a scale matrix must be estimated during the transformation, introducing further complexity into its formulation. Here, we present a novel, fully unsupervised algorithm which utilises non-linearly weighted image features for the solving the similarity transform (scale, translation rotation) between partially overlapping scans produced by SfM-MVS image processing. With the only initialization condition being partial intersection between input image sets, our method has major advantages over conventional iterative least squares minimization based methods (e.g. Iterative Closest Point variants), acting only on rigid areas of target scenes, being capable of reliably estimating the scaling factor and requiring no incipient estimation of the transformation to initialize (i.e. manual rough alignment). Moreover, because the solution is closed form, convergence is considerably more expedient that most iterative methods. It is hoped that the availability of improved co-registration routines, such as the one presented here, will facilitate the routine collection of multi-temporal topographic datasets by a wider range of geoscience practitioners.

Intellectual Initiatives at a Research University: Origins, Evolutions, and Challenges.

ERIC Educational Resources Information Center

Frost, Susan H.; Jean, Paul M.; Teodorescu, Daniel; Brown, Amy B.

This qualitative case study explored the origins, evolutions, and challenges of 12 cross-disciplinary intellectual initiatives at 1 research university. Researchers conducted open-ended interviews with leaders of the 12 initiatives and used program literature to support the data gathered from the interviews. The study found that key factors such…

Dynamic evolution of interface roughness during friction and wear processes.

PubMed

Kubiak, K J; Bigerelle, M; Mathia, T G; Dubois, A; Dubar, L

2014-01-01

Dynamic evolution of surface roughness and influence of initial roughness (S(a) = 0.282-6.73 µm) during friction and wear processes has been analyzed experimentally. The mirror polished and rough surfaces (28 samples in total) have been prepared by surface polishing on Ti-6Al-4V and AISI 1045 samples. Friction and wear have been tested in classical sphere/plane configuration using linear reciprocating tribometer with very small displacement from 130 to 200 µm. After an initial period of rapid degradation, dynamic evolution of surface roughness converges to certain level specific to a given tribosystem. However, roughness at such dynamic interface is still increasing and analysis of initial roughness influence revealed that to certain extent, a rheology effect of interface can be observed and dynamic evolution of roughness will depend on initial condition and history of interface roughness evolution. Multiscale analysis shows that morphology created in wear process is composed from nano, micro, and macro scale roughness. Therefore, mechanical parts working under very severe contact conditions, like rotor/blade contact, screws, clutch, etc. with poor initial surface finishing are susceptible to have much shorter lifetime than a quality finished parts. © Wiley Periodicals, Inc.

[WebSurvCa: web-based estimation of death and survival probabilities in a cohort].

PubMed

Clèries, Ramon; Ameijide, Alberto; Buxó, Maria; Vilardell, Mireia; Martínez, José Miguel; Alarcón, Francisco; Cordero, David; Díez-Villanueva, Ana; Yasui, Yutaka; Marcos-Gragera, Rafael; Vilardell, Maria Loreto; Carulla, Marià; Galceran, Jaume; Izquierdo, Ángel; Moreno, Víctor; Borràs, Josep M

2018-01-19

Relative survival has been used as a measure of the temporal evolution of the excess risk of death of a cohort of patients diagnosed with cancer, taking into account the mortality of a reference population. Once the excess risk of death has been estimated, three probabilities can be computed at time T: 1) the crude probability of death associated with the cause of initial diagnosis (disease under study), 2) the crude probability of death associated with other causes, and 3) the probability of absolute survival in the cohort at time T. This paper presents the WebSurvCa application (https://shiny.snpstats.net/WebSurvCa/), whereby hospital-based and population-based cancer registries and registries of other diseases can estimate such probabilities in their cohorts by selecting the mortality of the relevant region (reference population). Copyright © 2017 SESPAS. Publicado por Elsevier España, S.L.U. All rights reserved.

Early Forest Soils and Their Role in Devonian Global Change

PubMed

Retallack

1997-04-25

A paleosol in the Middle Devonian Aztec Siltstone of Victoria Land, Antarctica, is the most ancient known soil of well-drained forest ecosystems. Clay enrichment and chemical weathering of subsurface horizons in this and other Devonian forested paleosols culminate a long-term increase initiated during the Silurian. From Silurian into Devonian time, red clayey calcareous paleosols show a greater volume of roots and a concomitant decline in the density of animal burrows. These trends parallel the decline in atmospheric carbon dioxide determined from isotopic records of pedogenic carbonate in these same paleosols. The drawdown of carbon dioxide began well before the Devonian appearance of coals, large logs, and diverse terrestrial plants and animals, and it did not correlate with temporal variation in volcanic or metamorphic activity. The early Paleozoic greenhouse may have been curbed by the evolution of rhizospheres with an increased ratio of primary to secondary production and by more effective silicate weathering during Silurian time.

Nonplanar electrostatic shock waves in dense plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masood, W.; Rizvi, H.

2010-02-15

Two-dimensional quantum ion acoustic shock waves (QIASWs) are studied in an unmagnetized plasma consisting of electrons and ions. In this regard, a nonplanar quantum Kadomtsev-Petviashvili-Burgers (QKPB) equation is derived using the small amplitude perturbation expansion method. Using the tangent hyperbolic method, an analytical solution of the planar QKPB equation is obtained and subsequently used as the initial profile to numerically solve the nonplanar QKPB equation. It is observed that the increasing number density (and correspondingly the quantum Bohm potential) and kinematic viscosity affect the propagation characteristics of the QIASW. The temporal evolution of the nonplanar QIASW is investigated both inmore » Cartesian and polar planes and the results are discussed from the numerical stand point. The results of the present study may be applicable in the study of propagation of small amplitude localized electrostatic shock structures in dense astrophysical environments.« less

Visualization of transient phenomena during the interaction of pulsed CO2 laser radiation with matter

NASA Astrophysics Data System (ADS)

Schmitt, R.; Hugenschmidt, Manfred

1996-05-01

Carbon-dioxide-lasers operating in the pulsed mode with energy densities up to several tens of J/cm2 and peak power densities in the multi-MW/cm2-range may cause fast heating and melting. Eventually quasi-explosive ejection, decomposition or vaporization of material can be observed. Surface plasmas are strongly influencing the energy transfer from the laser radiation field to any target. For optically transparent plastics, such as PMMA for example, only slowly expanding plasmas (LSC-waves) are ignited at fluences around 20 J/cm2, with a low level of self-luminosity. High brightness, supersonically expanding plasma jets (LSD-waves) are generated at the same fluences on glasses. Similar conditions were found for metals as well. From recordings with a high speed CCD-camera, interesting features concerning the initial plasma phases and temporal evolution were deduced. Additionally, information was obtained concerning the quasi explosive ejection of material for PMMA.

The Weakly Nonlinear Magnetorotational Instability in a Global, Cylindrical Taylor–Couette Flow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Clark, S. E.; Oishi, Jeffrey S., E-mail: seclark@astro.columbia.edu

We conduct a global, weakly nonlinear analysis of the magnetorotational instability (MRI) in a Taylor–Couette flow. This is a multiscale, perturbative treatment of the nonideal, axisymmetric MRI near threshold, subject to realistic radial boundary conditions and cylindrical geometry. We analyze both the standard MRI, initialized by a constant vertical background magnetic field, and the helical MRI, with an azimuthal background field component. This is the first weakly nonlinear analysis of the MRI in a global Taylor–Couette geometry, as well as the first weakly nonlinear analysis of the helical MRI. We find that the evolution of the amplitude of the standardmore » MRI is described by a real Ginzburg–Landau equation (GLE), whereas the amplitude of the helical MRI takes the form of a complex GLE. This suggests that the saturated state of the helical MRI may itself be unstable on long spatial and temporal scales.« less

Universal evaporation dynamics of a confined sessile droplet

NASA Astrophysics Data System (ADS)

Bansal, Lalit; Hatte, Sandeep; Basu, Saptarshi; Chakraborty, Suman

2017-09-01

Droplet evaporation under confinement is ubiquitous to multitude of applications such as microfluidics, surface patterning, and ink-jet printing. However, the rich physics governing the universality in the underlying dynamics remains grossly elusive. Here, we bring out hitherto unexplored universal features of the evaporation dynamics of a sessile droplet entrapped in a 3D confined fluidic environment. We show, through extensive set of experiments and theoretical formulations, that the evaporation timescale for such a droplet can be represented by a unique function of the initial conditions. Moreover, using same theoretical considerations, we are able to trace and universally merge the volume evolution history of the droplets along with evaporation lifetimes, irrespective of the extent of confinement. We also showcase the internal flow transitions caused by spatio-temporal variation of evaporation flux due to confinement. These findings may be of profound importance in designing functionalized droplet evaporation devices for emerging engineering and biomedical applications.

Statistical Prediction of Sea Ice Concentration over Arctic

NASA Astrophysics Data System (ADS)

Kim, Jongho; Jeong, Jee-Hoon; Kim, Baek-Min

2017-04-01

In this study, a statistical method that predict sea ice concentration (SIC) over the Arctic is developed. We first calculate the Season-reliant Empirical Orthogonal Functions (S-EOFs) of monthly Arctic SIC from Nimbus-7 SMMR and DMSP SSM/I-SSMIS Passive Microwave Data, which contain the seasonal cycles (12 months long) of dominant SIC anomaly patterns. Then, the current SIC state index is determined by projecting observed SIC anomalies for latest 12 months to the S-EOFs. Assuming the current SIC anomalies follow the spatio-temporal evolution in the S-EOFs, we project the future (upto 12 months) SIC anomalies by multiplying the SI and the corresponding S-EOF and then taking summation. The predictive skill is assessed by hindcast experiments initialized at all the months for 1980-2010. When comparing predictive skill of SIC predicted by statistical model and NCEP CFS v2, the statistical model shows a higher skill in predicting sea ice concentration and extent.

Influence of intrinsic decoherence on tripartite entanglement and bipartite fidelity of polar molecules in pendular states

DOE Office of Scientific and Technical Information (OSTI.GOV)

Han, Jia-Xing; Hu, Yuan; Jin, Yu

An array of ultracold polar molecules trapped in an external electric field is regarded as a promising carrier of quantum information. Under the action of this field, molecules are compelled to undergo pendular oscillations by the Stark effect. Particular attention has been paid to the influence of intrinsic decoherence on the model of linear polar molecular pendular states, thereby we evaluate the tripartite entanglement with negativity, as well as fidelity of bipartite quantum systems for input and output signals using electric dipole moments of polar molecules as qubits. According to this study, we consider three typical initial states for bothmore » systems, respectively, and investigate the temporal evolution with variable values of the external field intensity, the intrinsic decoherence factor, and the dipole-dipole interaction. Thus, we demonstrate the sound selection of these three main parameters to obtain the best entanglement degree and fidelity.« less

Influence of intrinsic decoherence on tripartite entanglement and bipartite fidelity of polar molecules in pendular states.

PubMed

Han, Jia-Xing; Hu, Yuan; Jin, Yu; Zhang, Guo-Feng

2016-04-07

An array of ultracold polar molecules trapped in an external electric field is regarded as a promising carrier of quantum information. Under the action of this field, molecules are compelled to undergo pendular oscillations by the Stark effect. Particular attention has been paid to the influence of intrinsic decoherence on the model of linear polar molecular pendular states, thereby we evaluate the tripartite entanglement with negativity, as well as fidelity of bipartite quantum systems for input and output signals using electric dipole moments of polar molecules as qubits. According to this study, we consider three typical initial states for both systems, respectively, and investigate the temporal evolution with variable values of the external field intensity, the intrinsic decoherence factor, and the dipole-dipole interaction. Thus, we demonstrate the sound selection of these three main parameters to obtain the best entanglement degree and fidelity.

Contribution to study of interfaces instabilities in plane, cylindrical and spherical geometry

NASA Astrophysics Data System (ADS)

Toque, Nathalie

1996-12-01

This thesis proposes several experiments of hydrodynamical instabilities which are studied, numerically and theoretically. The experiments are in plane and cylindrical geometry. Their X-ray radiographies show the evolution of an interface between two solid media crossed by a detonation wave. These materials are initially solid. They become liquide under shock wave or stay between two phases, solid and liquid. The numerical study aims at simulating with the codes EAD and Ouranos, the interfaces instabilities which appear in the experiments. The experimental radiographies and the numerical pictures are in quite good agreement. The theoretical study suggests to modelise a spatio-temporal part of the experiments to obtain the quantitative development of perturbations at the interfaces and in the flows. The models are linear and in plane, cylindrical and spherical geometry. They preceed the inoming study of transition between linear and non linear development of instabilities in multifluids flows crossed by shock waves.

[Evolution of nodular scleritis with ultrasound biomicroscopy: case report].

PubMed

Martinez, Andrea Alejandra Gonzalez; Matos, Kimble Teixeira Fonseca; Trevisani, Virgínia; Hirai, Alcides; Allemann, Norma

2013-01-01

To establish evolutionary pattern of a case of nodular scleritis with high frequency ultrasound during treatment. Twenty-seven year old female, initial manifestation of intermediate uveitis, bilateral macular edema after clinical treatment with topical and oral steroids. After four months, we observed the formation of a scleral nodule in the right eye when patient underwent high frequency ultrasound (Paradigm, 50 MHz transducer, immersion technique). The lesion in right eye was characterized at high frequency ultrasound as a nodular lesion located at the anterior inferior temporal wall associated with localized reduction of scleral thickness. After intravitreal injection of triamcinolone for treatment of macular edema, clinical regression of the scleral nodule was observed in right eye, maintaining reduced scleral thickness. High frequency ultrasound assisted in the diagnosis of nodular scleritis during the phases of treatment and in the identify its characteristic sequel feature, the scleral thinning.

Analytical report of the 2016 dengue outbreak in Córdoba city, Argentina.

PubMed

Rotela, Camilo; Lopez, Laura; Frías Céspedes, María; Barbas, Gabriela; Lighezzolo, Andrés; Porcasi, Ximena; Lanfri, Mario A; Scavuzzo, Carlos M; Gorla, David E

2017-11-06

After elimination of the Aedes aegypti vector in South America in the 1960s, dengue outbreaks started to reoccur during the 1990s; strongly in Argentina since 1998. In 2016, Córdoba City had the largest dengue outbreak in its history. In this article we report this outbreak including spatio-temporal analysis of cases and vectors in the city. A total of 653 dengue cases were recorded by the laboratory-based dengue surveillance system and georeferenced by their residential addresses. Case maps were generated from the epidemiological week 1 (beginning of January) to week 19 (mid-May). Dengue outbreak temporal evolution was analysed globally and three specific, high-incidence zones were detected using Knox analysis to characterising its spatio-temporal attributes. Field and remotely sensed data were collected and analysed in real time and a vector presence map based on the MaxEnt approach was generated to define hotspots, towards which the pesticide- based strategy was then targeted. The recorded pattern of cases evolution within the community suggests that dengue control measures should be improved.

Analyzing the evolution of young people's brain cancer mortality in Spanish provinces.

PubMed

Ugarte, M D; Adin, A; Goicoa, T; López-Abente, G

2015-06-01

To analyze the spatio-temporal evolution of brain cancer relative mortality risks in young population (under 20 years of age) in Spanish provinces during the period 1986-2010. A new and flexible conditional autoregressive spatio-temporal model with two levels of spatial aggregation was used. Brain cancer relative mortality risks in young population in Spanish provinces decreased during the last years, although a clear increase was observed during the 1990s. The global geographical pattern emphasized a high relative mortality risk in Navarre and a low relative mortality risk in Madrid. Although there is a specific Autonomous Region-time interaction effect on the relative mortality risks this effect is weak in the final estimates when compared to the global spatial and temporal effects. Differences in mortality between regions and over time may be caused by the increase in survival rates, the differences in treatment or the availability of diagnostic tools. The increase in relative risks observed in the 1990s was probably due to improved diagnostics with computerized axial tomography and magnetic resonance imaging techniques. Copyright © 2015 Elsevier Ltd. All rights reserved.

A New Framework For The Evolution of Terrestrial Planets: Bi-stability, Stochastic Effects, and the Non-Uniqueness of Tectonic States

NASA Astrophysics Data System (ADS)

Weller, M. B.; Lenardic, A.

2017-12-01

Of all the Solar System bodies, the Earth is the only one for which significant observation and constraints are accessible such that they can be used to discriminate between competing models of Earth's tectonic evolution. Therefore, it is a natural tendency to use these observations to inform more general models of planetary evolution. Yet, our understating of Earth's evolution is far from complete. Geodynamic and geochemical evidence suggests that plate tectonics may not have operated on the early Earth, with both the timing of its onset and the length of its activity far from certain. In recent years, the potential of tectonic bi-stability (multiple stable, energetically allowed solutions) has been shown to be dynamically viable, both from analytical analysis and through numeric experiments in two and three dimensions. The indication is that multiple tectonic modes may operate on a single planetary body at different times within its temporal evolution. Further, there exists the potential that feedback mechanisms between the internal dynamics and surface processes (e.g., surface temperature changes driven by long term climate evolution), acting at different thermal evolution times, can cause terrestrial worlds to alternate between multiple tectonic states over giga-year timescales. Implied here is that terrestrial planets have the potential to migrate through tectonic regimes at similar `thermal evolutionary times' - points were planets have a similar bulk mantle temperature and energies -, but at very different `temporal times' - time since planetary formation. It can then be shown that identical planets at similar stages of their evolution may exhibit different tectonic regimes due to random fluctuations. A new framework of planetary evolution that moves toward probabilistic arguments based on general physical principals, as opposed to particular rheologies, and incorporates the potential of tectonic regime transitions and multiple tectonics states being viable at equivalent physical and chemical conditions, will be discussed.

Radiative shocks produced from spherical cryogenic implosions at the National Ignition Facilitya)

NASA Astrophysics Data System (ADS)

Pak, A.; Divol, L.; Gregori, G.; Weber, S.; Atherton, J.; Bennedetti, R.; Bradley, D. K.; Callahan, D.; Casey, D. T.; Dewald, E.; Döppner, T.; Edwards, M. J.; Frenje, J. A.; Glenn, S.; Grim, G. P.; Hicks, D.; Hsing, W. W.; Izumi, N.; Jones, O. S.; Johnson, M. G.; Khan, S. F.; Kilkenny, J. D.; Kline, J. L.; Kyrala, G. A.; Lindl, J.; Landen, O. L.; Le Pape, S.; Ma, T.; MacPhee, A.; MacGowan, B. J.; MacKinnon, A. J.; Masse, L.; Meezan, N. B.; Moody, J. D.; Olson, R. E.; Ralph, J. E.; Robey, H. F.; Park, H.-S.; Remington, B. A.; Ross, J. S.; Tommasini, R.; Town, R. P. J.; Smalyuk, V.; Glenzer, S. H.; Moses, E. I.

2013-05-01

Spherically expanding radiative shock waves have been observed from inertially confined implosion experiments at the National Ignition Facility. In these experiments, a spherical fusion target, initially 2 mm in diameter, is compressed via the pressure induced from the ablation of the outer target surface. At the peak compression of the capsule, x-ray and nuclear diagnostics indicate the formation of a central core, with a radius and ion temperature of ˜20 μm and ˜ 2 keV, respectively. This central core is surrounded by a cooler compressed shell of deuterium-tritium fuel that has an outer radius of ˜40 μm and a density of >500 g/cm3. Using inputs from multiple diagnostics, the peak pressure of the compressed core has been inferred to be of order 100 Gbar for the implosions discussed here. The shock front, initially located at the interface between the high pressure compressed fuel shell and surrounding in-falling low pressure ablator plasma, begins to propagate outwards after peak compression has been reached. Approximately 200 ps after peak compression, a ring of x-ray emission created by the limb-brightening of a spherical shell of shock-heated matter is observed to appear at a radius of ˜100 μm. Hydrodynamic simulations, which model the experiment and include radiation transport, indicate that the sudden appearance of this emission occurs as the post-shock material temperature increases and upstream density decreases, over a scale length of ˜10 μm, as the shock propagates into the lower density (˜1 g/cc), hot (˜250 eV) plasma that exists at the ablation front. The expansion of the shock-heated matter is temporally and spatially resolved and indicates a shock expansion velocity of ˜300 km/s in the laboratory frame. The magnitude and temporal evolution of the luminosity produced from the shock-heated matter was measured at photon energies between 5.9 and 12.4 keV. The observed radial shock expansion, as well as the magnitude and temporal evolution of the luminosity from the shock-heated matter, is consistent with 1-D radiation hydrodynamic simulations. Analytic estimates indicate that the radiation energy flux from the shock-heated matter is of the same order as the in-flowing material energy flux, and suggests that this radiation energy flux modifies the shock front structure. Simulations support these estimates and show the formation of a radiative shock, with a precursor that raises the temperature ahead of the shock front, a sharp μm-scale thick spike in temperature at the shock front, followed by a post-shock cooling layer.

Graph distance for complex networks

NASA Astrophysics Data System (ADS)

Shimada, Yutaka; Hirata, Yoshito; Ikeguchi, Tohru; Aihara, Kazuyuki

2016-10-01

Networks are widely used as a tool for describing diverse real complex systems and have been successfully applied to many fields. The distance between networks is one of the most fundamental concepts for properly classifying real networks, detecting temporal changes in network structures, and effectively predicting their temporal evolution. However, this distance has rarely been discussed in the theory of complex networks. Here, we propose a graph distance between networks based on a Laplacian matrix that reflects the structural and dynamical properties of networked dynamical systems. Our results indicate that the Laplacian-based graph distance effectively quantifies the structural difference between complex networks. We further show that our approach successfully elucidates the temporal properties underlying temporal networks observed in the context of face-to-face human interactions.

Temporal relationship between high-energy proton acceleration and magnetic field changes during solar flares

NASA Astrophysics Data System (ADS)

Kurt, Victoria; Yushkov, Boris

Understanding of the association of the magnetic field evolution in the corona and the temporal evolution of electromagnetic emissions produced by the accelerated particles during a solar flare can provide information about the nature of the energy-release process and its location. Recent high-spatial-resolution observations in HXR, UV and radio emissions allow one to study in detail a structure of two-ribbon flare site. According to these observations, the flare process can be divided into two different intervals with different temporal evolution of morphological structure: loop contraction during impulsive phase and subsequent loop expansion. On the other hand, the appearance of high-energy protons (with energy >300 MeV - an energy threshold of the pion production) in the solar atmosphere can be revealed from an emerging pion-decay component of high-energy gamma-ray emission. The present work is based on comparison of measurements of high-energy gamma-rays performed with the SONG detector onboard the CORONAS-F mission and reported observations of magnetic field evolution, such as HXR foot points (FP) separation and flare shear temporal behavior, or motion of UV/radio loops. We reliably identified the pion-decay component of gamma-ray emission in the course of five events attended with suitable spatial observations, namely, 2001 August 25, 2002 August 24, 2003 October 28, 2003 October 29, and 2005 January 20, and determined its onset time. We found that in these events the pion-decay emission occurred when the distance between conjugated foot-points of flare loops ceased to decrease and began to increase, i.e. changed from shrinkage to expansion. This result leads to the conclusion that the most efficient proton acceleration up to >300 MeV coincided in time with the radical reconfiguration of the magnetic field in the flare site. Earlier we found that the pion-decay emission onset in the 2003 October 28 flare was close to the time of maximum change rate of the magnetic flux calculated by Miklenic et al. (2009).

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE PAGES

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; ...

2016-05-26

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

NASA Astrophysics Data System (ADS)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; McEvoy, A. M.; Zylstra, A.; Hammel, B. A.; Sepke, S. M.; Leatherland, A.; Gales, S.

2016-05-01

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. We propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method uses a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT “clean” and DT “mix” gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. An experiment to observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λii∼T2/Z2ρ at the gas/shell interface. Since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.

CT imaging during microwave ablation: Analysis of spatial and temporal tissue contraction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Dong; Brace, Christopher L., E-mail: clbrace@wisc.edu

Purpose: To analyze the spatial distribution and temporal development of liver tissue contraction during high-temperature ablation by using intraprocedural computed tomography (CT) imaging. Methods: A total of 46 aluminum fiducial markers were positioned in a 60 × 45 mm grid, in a single plane, around a microwave ablation antenna in each of six ex vivo bovine liver samples. Ablations were performed for 10 min at 100 W. CT data of the liver sample were acquired every 30 s during ablation. Fiducial motion between acquisitions was tracked in postprocessing and used to calculate measures of tissue contraction and contraction rates. Themore » spatial distribution and temporal evolution of contraction were analyzed. Results: Fiducial displacement indicated that the zone measured postablation was 8.2 ± 1.8 mm (∼20%) smaller in the radial direction and 7.1 ± 1.0 mm (∼10%) shorter in the longitudinal direction than the preablation tissue dimension. Therefore, the total ablation volume was reduced from its preablation value by approximately 45%. Very little longitudinal contraction was noted in the distal portion of the ablation zone. Central tissues contracted more than 60%, which was near an estimated limit of ∼70% based on initial water content. More peripheral tissues contracted only 15% in any direction. Contraction rates peaked during the first 60 s of heating with a roughly exponential decay over time. Conclusions: Ablation zones measured posttreatment are significantly smaller than the pretreatment tissue dimensions. Tissue contraction is spatially dependent, with the greatest effect occurring in the central ablation zone. Contraction rate peaks early and decays over time.« less

Clinical features and radiological evaluation of otic capsule sparing temporal bone fractures.

PubMed

Song, S W; Jun, B C; Kim, H

2017-03-01

To evaluate the clinical and radiological aspects of otic capsule sparing temporal bone fractures. Using medical records, 188 temporal bones of 173 patients with otic capsule sparing temporal bone fractures were evaluated. Otoscopic findings and symptoms, facial paralysis, and hearing loss were assessed. Using regional analysis, 7 fractures were classified as type I, 85 as type II, 169 as type III and 114 as type IV. Fourteen of the 17 facial paralysis cases improved to House-Brackmann grade II or lower at an average of 57.6 days after the initial evaluation. Thirty-one patients underwent initial and follow-up pure tone audiometry examinations. The air-bone gap closed significantly from 27.2 dB at an average of 21.8 days post-trauma to 19.6 dB at an average of 79.9 days post-trauma, without the need for surgical intervention. Initial conservative treatment for facial paralysis or conductive hearing loss is possible in otic capsule sparing fracture cases after careful evaluation of the patient.

Implications of prion adaptation and evolution paradigm for human neurodegenerative diseases.

PubMed

Kabir, M Enamul; Safar, Jiri G

2014-01-01

There is a growing body of evidence indicating that number of human neurodegenerative diseases, including Alzheimer disease, Parkinson disease, fronto-temporal dementias, and amyotrophic lateral sclerosis, propagate in the brain via prion-like intercellular induction of protein misfolding. Prions cause lethal neurodegenerative diseases in humans, the most prevalent being sporadic Creutzfeldt-Jakob disease (sCJD); they self-replicate and spread by converting the cellular form of prion protein (PrP(C)) to a misfolded pathogenic conformer (PrP(Sc)). The extensive phenotypic heterogeneity of human prion diseases is determined by polymorphisms in the prion protein gene, and by prion strain-specific conformation of PrP(Sc). Remarkably, even though informative nucleic acid is absent, prions may undergo rapid adaptation and evolution in cloned cells and upon crossing the species barrier. In the course of our investigation of this process, we isolated distinct populations of PrP(Sc) particles that frequently co-exist in sCJD. The human prion particles replicate independently and undergo competitive selection of those with lower initial conformational stability. Exposed to mutant substrate, the winning PrP(Sc) conformers are subject to further evolution by natural selection of the subpopulation with the highest replication rate due to the lowest stability. Thus, the evolution and adaptation of human prions is enabled by a dynamic collection of distinct populations of particles, whose evolution is governed by the selection of progressively less stable, faster replicating PrP(Sc) conformers. This fundamental biological mechanism may explain the drug resistance that some prions gained after exposure to compounds targeting PrP(Sc). Whether the phenotypic heterogeneity of other neurodegenerative diseases caused by protein misfolding is determined by the spectrum of misfolded conformers (strains) remains to be established. However, the prospect that these conformers may evolve and adapt by a prion-like mechanism calls for the reevaluation of therapeutic strategies that target aggregates of misfolded proteins, and argues for new therapeutic approaches that will focus on prior pathogenetic steps.

Controlled experiments of hillslope co-evolution at the Biosphere 2 Landscape Evolution Observatory: toward prediction of coupled hydrological, biogeochemical, and ecological change

NASA Astrophysics Data System (ADS)

Volkmann, T. H. M.; Sengupta, A.; Pangle, L.; Abramson, N.; Barron-Gafford, G.; Breshears, D. D.; Bugaj, A.; Chorover, J.; Dontsova, K.; Durcik, M.; Ferre, T. P. A.; Harman, C. J.; Hunt, E.; Huxman, T. E.; Kim, M.; Maier, R. M.; Matos, K.; Alves Meira Neto, A.; Meredith, L. K.; Monson, R. K.; Niu, G. Y.; Pelletier, J. D.; Rasmussen, C.; Ruiz, J.; Saleska, S. R.; Schaap, M. G.; Sibayan, M.; Tuller, M.; Van Haren, J. L. M.; Wang, Y.; Zeng, X.; Troch, P. A.

2017-12-01

Understanding the process interactions and feedbacks among water, microbes, plants, and porous geological media is crucial for improving predictions of the response of Earth's critical zone to future climatic conditions. However, the integrated co-evolution of landscapes under change is notoriously difficult to investigate. Laboratory studies are typically limited in spatial and temporal scale, while field studies lack observational density and control. To bridge the gap between controlled lab and uncontrolled field studies, the University of Arizona - Biosphere 2 built a macrocosm experiment of unprecedented scale: the Landscape Evolution Observatory (LEO). LEO consists of three replicated, 330-m2 hillslope landscapes inside a 5000-m2 environmentally controlled facility. The engineered landscapes contain 1-m depth of basaltic tephra ground to homogenous loamy sand that will undergo physical, chemical, and mineralogical changes over many years. Each landscape contains a dense sensor network capable of resolving water, carbon, and energy cycling processes at sub-meter to whole-landscape scale. Embedded sampling devices allow for quantification of biogeochemical processes, and facilitate the use of chemical tracers applied with the artificial rainfall. LEO is now fully operational and intensive forcing experiments have been launched. While operating the massive infrastructure poses significant challenges, LEO has demonstrated the capacity of tracking multi-scale matter and energy fluxes at a level of detail impossible in field experiments. Initial sensor, sampler, and restricted soil coring data are already providing insights into the tight linkages between water flow, weathering, and (micro-) biological community development during incipient landscape evolution. Over the years to come, these interacting processes are anticipated to drive the model systems to increasingly complex states, potentially perturbed by changes in climatic forcing. By intensively monitoring the evolutionary trajectory, integrating data with models, and fostering community-wide collaborations, we envision that emergent landscape structures and functions can be linked and significant progress can be made toward predicting the coupled hydro-biogeochemical and ecological responses to global change.

Protoplanetary disk formation and evolution models: DM Tau and GM Aur

NASA Astrophysics Data System (ADS)

Hueso, R.; Guillot, T.

2002-09-01

We study the formation and evolution of protoplanetary disks using an axisymmetric turbulent disk model. We compare model results with observational parameters derived for the DM Tau and GM Aur systems. These are relatively old T Tauri stars with large and massive protoplanetary disks. Early disk formation is studied in the standard scenario of slowly rotating isothermal collapsing spheres and is strongly dependent on the initial angular momentum and the collapse accretion rate. The viscous evolution of the disk is integrated in time using the classical Alpha prescription of turbulence. We follow the temporal evolution of the disks until their characteristics fit the observed characteristics of DM Tau and GM Aur. We therefore obtain the set of model parameters that are able to explain the present state of these disks. We also study the disk evolution under the Beta parameterization of turbulence, recently proposed for sheared flows on protoplanetary disks. Both parameterizations allow explaining the present state of both DM Tau and GM Aur. We infer a value of Alpha between 5x10-3 to 0.02 for DM Tau and one order of magnitude smaller for GM Aur. Values of the Beta parameter are in accordance with theoretical predictions of Beta around 2x10-5 but with a larger dispersion on other model parameters, which make us favor the Alpha parameterization of turbulence. Implications for planetary system development in these systems are presented. In particular, GM Aur is a massive and slowly evolving disk where conditions are very favorable for planetesimal growth. The large value of present disk mass and the relatively small observed accretion rate of this system may also be indicative of the presence of an inner gas giant planet. Acknowledgements: This work has been supported by Programme Nationale de Planetologie. R. Hueso acknowledges a post-doctoral fellowship from Gobierno Vasco.

Targeting Neuronal-like Metabolism of Metastatic Tumor Cells as a Novel Therapy for Breast Cancer Brain Metastasis

DTIC Science & Technology

2016-03-01

Currently, no effective drug treatments are available for brain metastasis. In this proposal, we hypothesize: interactions with reactive brain astrocytes...neurological drugs . In this project, we propose two specific aims to explore the functional importance of the early metastatic evolution and the...feasibility of targeting metastatic evolution by repurposing neurological drugs . Aim 1: Study the spatial and temporal interactions between brain

Application of a magnetograph and X-ray telescope to the study of coronal structure variations

NASA Technical Reports Server (NTRS)

Rust, D. M.

1980-01-01

The application of magnetographs and X-ray imaging techniques to determine the magnitude, structure, origin, and evolution of the solar coronal magnetic field is examined. The spatial and temporal resolution of the X-ray telescope is discussed and a comparison of ground based magnetogram sequences versus a magnetograph in space is presented. Skylab photographs of the evolution of transient coronal holes are provided.

TTLEM: Open access tool for building numerically accurate landscape evolution models in MATLAB

NASA Astrophysics Data System (ADS)

Campforts, Benjamin; Schwanghart, Wolfgang; Govers, Gerard

2017-04-01

Despite a growing interest in LEMs, accuracy assessment of the numerical methods they are based on has received little attention. Here, we present TTLEM which is an open access landscape evolution package designed to develop and test your own scenarios and hypothesises. TTLEM uses a higher order flux-limiting finite-volume method to simulate river incision and tectonic displacement. We show that this scheme significantly influences the evolution of simulated landscapes and the spatial and temporal variability of erosion rates. Moreover, it allows the simulation of lateral tectonic displacement on a fixed grid. Through the use of a simple GUI the software produces visible output of evolving landscapes through model run time. In this contribution, we illustrate numerical landscape evolution through a set of movies spanning different spatial and temporal scales. We focus on the erosional domain and use both spatially constant and variable input values for uplift, lateral tectonic shortening, erodibility and precipitation. Moreover, we illustrate the relevance of a stochastic approach for realistic hillslope response modelling. TTLEM is a fully open source software package, written in MATLAB and based on the TopoToolbox platform (topotoolbox.wordpress.com). Installation instructions can be found on this website and the therefore designed GitHub repository.

Temporal and spatial evolution of nanosecond microwave-driven plasma

NASA Astrophysics Data System (ADS)

Chang, C.; Chen, X. Q.; Zhu, M.; Pu, Y. K.

2018-06-01

In this paper, a method for simultaneously acquiring the temporal and spatial evolution of characteristic plasma spectra in a single microwave pulse is proposed and studied. By using multi-sub-beam fiber bundles coupled with a spectrometer and EMICCD (Electron-multiplying intensified charge-coupled device), the spatial distribution and time evolution of characteristic spectra of desorbed gases at the dielectric/vacuum interface during nanosecond microwave-driven plasma discharge are observed. Arrays of small align tubes punctured with metal walls of feed horn are filled with separate fibers of matched sizes and equal lengths. The output ends of fibers arranged in a single longitudinal column are connected to the entrance slit of a spectrometer, where the optical spectrum inputs to a high-speed EMICCD, to detect the rapid-varying time and space spectra of nanosecond giga-watt microwave discharges. The evolution of spectral clusters of N2 (C-B), N2+ (B-X), and the hydrogen atoms is discovered and monitored. The whole duration of light emission is much longer than the microwave pulse, and the intensities of ion N2+ (B-X) spectra increase after microwave pulses with rise times of 25-50 ns. The brightness distribution of plasma spectra in different space is observed and approximately consistent with the simulated E-field distribution.

Volcanic stratigraphy: A review

NASA Astrophysics Data System (ADS)

Martí, Joan; Groppelli, Gianluca; Brum da Silveira, Antonio

2018-05-01

Volcanic stratigraphy is a fundamental component of geological mapping in volcanic areas as it yields the basic criteria and essential data for identifying the spatial and temporal relationships between volcanic products and intra/inter-eruptive processes (earth-surface, tectonic and climatic), which in turn provides greater understanding of the geological evolution of a region. Establishing precise stratigraphic relationships in volcanic successions is not only essential for understanding the past behaviour of volcanoes and for predicting how they might behave in the future, but is also critical for establishing guidelines for exploring economic and energy resources associated with volcanic systems or for reconstructing the evolution of sedimentary basins in which volcanism has played a significant role. Like classical stratigraphy, volcanic stratigraphy should also be defined using a systematic methodology that can provide an organised and comprehensive description of the temporal and spatial evolution of volcanic terrain. This review explores different methods employed in studies of volcanic stratigraphy, examines four case studies that use differing stratigraphic approaches, and recommends methods for using systematic volcanic stratigraphy based on the application of the concepts of traditional stratigraphy but adapted to the needs of volcanological environment.

Using Dynamic Multi-Task Non-Negative Matrix Factorization to Detect the Evolution of User Preferences in Collaborative Filtering

PubMed Central

Ju, Bin; Qian, Yuntao; Ye, Minchao; Ni, Rong; Zhu, Chenxi

2015-01-01

Predicting what items will be selected by a target user in the future is an important function for recommendation systems. Matrix factorization techniques have been shown to achieve good performance on temporal rating-type data, but little is known about temporal item selection data. In this paper, we developed a unified model that combines Multi-task Non-negative Matrix Factorization and Linear Dynamical Systems to capture the evolution of user preferences. Specifically, user and item features are projected into latent factor space by factoring co-occurrence matrices into a common basis item-factor matrix and multiple factor-user matrices. Moreover, we represented both within and between relationships of multiple factor-user matrices using a state transition matrix to capture the changes in user preferences over time. The experiments show that our proposed algorithm outperforms the other algorithms on two real datasets, which were extracted from Netflix movies and Last.fm music. Furthermore, our model provides a novel dynamic topic model for tracking the evolution of the behavior of a user over time. PMID:26270539

Using Dynamic Multi-Task Non-Negative Matrix Factorization to Detect the Evolution of User Preferences in Collaborative Filtering.

PubMed

Ju, Bin; Qian, Yuntao; Ye, Minchao; Ni, Rong; Zhu, Chenxi

2015-01-01

Predicting what items will be selected by a target user in the future is an important function for recommendation systems. Matrix factorization techniques have been shown to achieve good performance on temporal rating-type data, but little is known about temporal item selection data. In this paper, we developed a unified model that combines Multi-task Non-negative Matrix Factorization and Linear Dynamical Systems to capture the evolution of user preferences. Specifically, user and item features are projected into latent factor space by factoring co-occurrence matrices into a common basis item-factor matrix and multiple factor-user matrices. Moreover, we represented both within and between relationships of multiple factor-user matrices using a state transition matrix to capture the changes in user preferences over time. The experiments show that our proposed algorithm outperforms the other algorithms on two real datasets, which were extracted from Netflix movies and Last.fm music. Furthermore, our model provides a novel dynamic topic model for tracking the evolution of the behavior of a user over time.

The tangled bank of amino acids

PubMed Central

Pollock, David D.

2016-01-01

Abstract The use of amino acid substitution matrices to model protein evolution has yielded important insights into both the evolutionary process and the properties of specific protein families. In order to make these models tractable, standard substitution matrices represent the average results of the evolutionary process rather than the underlying molecular biophysics and population genetics, treating proteins as a set of independently evolving sites rather than as an integrated biomolecular entity. With advances in computing and the increasing availability of sequence data, we now have an opportunity to move beyond current substitution matrices to more interpretable mechanistic models with greater fidelity to the evolutionary process of mutation and selection and the holistic nature of the selective constraints. As part of this endeavour, we consider how epistatic interactions induce spatial and temporal rate heterogeneity, and demonstrate how these generally ignored factors can reconcile standard substitution rate matrices and the underlying biology, allowing us to better understand the meaning of these substitution rates. Using computational simulations of protein evolution, we can demonstrate the importance of both spatial and temporal heterogeneity in modelling protein evolution. PMID:27028523

Natural and Chemotherapy-Induced Clonal Evolution of Tumors.

PubMed

Ibragimova, M K; Tsyganov, M M; Litviakov, N V

2017-04-01

Evolution and natural selection of tumoral clones in the process of transformation and the following carcinogenesis can be called natural clonal evolution. Its main driving factors are internal: genetic instability initiated by driver mutations and microenvironment, which enables selective pressure while forming the environment for cell transformation and their survival. We present our overview of contemporary research dealing with mechanisms of carcinogenesis in different localizations from precancerous pathologies to metastasis and relapse. It shows that natural clonal evolution establishes intratumoral heterogeneity and enables tumor progression. Tumors of monoclonal origin are of low-level intratumoral heterogeneity in the initial stages, and this increases with the size of the tumor. Tumors of polyclonal origin are of extremely high-level intratumoral heterogeneity in the initial stages and become more homogeneous when larger due to clonal expansion. In cases of chemotherapy-induced clonal evolution of a tumor, chemotherapy becomes the leading factor in treatment. The latest research shows that the impact of chemotherapy can radically increase the speed of clonal evolution and lead to new malignant and resistant clones that cause tumor metastasis. Another option of chemotherapy-induced clonal evolution is formation of a new dominant clone from a clone that was minor in the initial tumor and obtained free space due to elimination of sensitive clones by chemotherapy. As a result, in ~20% of cases, chemotherapy can stimulate metastasis and relapse of tumors due to clonal evolution. The conclusion of the overview formulates approaches to tumor treatment based on clonal evolution: in particular, precision therapy, prediction of metastasis stimulation in patients treated with chemotherapy, methods of genetic evaluation of chemotherapy efficiency and clonal-oriented treatment, and approaches to manipulating the clonal evolution of tumors are presented.

Limits in the evolution of biological form: a theoretical morphologic perspective.

PubMed

McGhee, George R

2015-12-06

Limits in the evolution of biological form can be empirically demonstrated by using theoretical morphospace analyses, and actual analytic examples are given for univalved ammonoid shell form, bivalved brachiopod shell form and helical bryozoan colony form. Limits in the evolution of form in these animal groups can be shown to be due to functional and developmental constraints on possible evolutionary trajectories in morphospace. Future evolutionary-limit research is needed to analyse the possible existence of temporal constraint in the evolution of biological form on Earth, and in the search for the possible existence of functional alien life forms on Titan and Triton that are developmentally impossible for Earth life.

Coherence Evolution and Transfer Supplemented by Sender's Initial-State Restoring

NASA Astrophysics Data System (ADS)

Fel'dman, E. B.; Zenchuk, A. I.

2017-12-01

The evolution of quantum coherences comes with a set of conservation laws provided that the Hamiltonian governing this evolution conserves the spin-excitation number. At that, coherences do not intertwist during the evolution. Using the transmission line and the receiver in the initial ground state we can transfer the coherences to the receiver without interaction between them, although the matrix elements contributing to each particular coherence intertwist in the receiver's state. Therefore we propose a tool based on the unitary transformation at the receiver side to untwist these elements and thus restore (at least partially) the structure of the sender's initial density matrix. A communication line with two-qubit sender and receiver is considered as an example of implementation of this technique.

Evolution of Rotor Wake in Swirling Flow

NASA Technical Reports Server (NTRS)

El-Haldidi, Basman; Atassi, Hafiz; Envia, Edmane; Podboy, Gary

2000-01-01

A theory is presented for modeling the evolution of rotor wakes as a function of axial distance in swirling mean flows. The theory, which extends an earlier work to include arbitrary radial distributions of mean swirl, indicates that swirl can significantly alter the wake structure of the rotor especially at large downstream distances (i.e., for moderate to large rotor-stator spacings). Using measured wakes of a representative scale model fan stage to define the mean swirl and initial wake perturbations, the theory is used to predict the subsequent evolution of the wakes. The results indicate the sensitivity of the wake evolution to the initial profile and the need to have complete and consistent initial definition of both velocity and pressure perturbations.

The arc arises: The links between volcanic output, arc evolution and melt composition

NASA Astrophysics Data System (ADS)

Brandl, Philipp A.; Hamada, Morihisa; Arculus, Richard J.; Johnson, Kyle; Marsaglia, Kathleen M.; Savov, Ivan P.; Ishizuka, Osamu; Li, He

2017-03-01

Subduction initiation is a key process for global plate tectonics. Individual lithologies developed during subduction initiation and arc inception have been identified in the trench wall of the Izu-Bonin-Mariana (IBM) island arc but a continuous record of this process has not previously been described. Here, we present results from International Ocean Discovery Program Expedition 351 that drilled a single site west of the Kyushu-Palau Ridge (KPR), a chain of extinct stratovolcanoes that represents the proto-IBM island arc, active for ∼25 Ma following subduction initiation. Site U1438 recovered 150 m of oceanic igneous basement and ∼1450 m of overlying sediments. The lower 1300 m of these sediments comprise volcaniclastic gravity-flow deposits shed from the evolving KPR arc front. We separated fresh magmatic minerals from Site U1438 sediments, and analyzed 304 glass (formerly melt) inclusions, hosted by clinopyroxene and plagioclase. Compositions of glass inclusions preserve a temporal magmatic record of the juvenile island arc, complementary to the predominant mid-Miocene to recent activity determined from tephra layers recovered by drilling in the IBM forearc. The glass inclusions record the progressive transition of melt compositions dominated by an early 'calc-alkalic', high-Mg andesitic stage to a younger tholeiitic stage over a time period of 11 Ma. High-precision trace element analytical data record a simultaneously increasing influence of a deep subduction component (e.g., increase in Th vs. Nb, light rare earth element enrichment) and a more fertile mantle source (reflected in increased high field strength element abundances). This compositional change is accompanied by increased deposition rates of volcaniclastic sediments reflecting magmatic output and maturity of the arc. We conclude the 'calc-alkalic' stage of arc evolution may endure as long as mantle wedge sources are not mostly advected away from the zones of arc magma generation, or the rate of wedge replenishment by corner flow does not overwhelm the rate of magma extraction.

Past Changes in the Vertical Distribution of Ozone Part 1: Measurement Techniques, Uncertainties and Availability

NASA Technical Reports Server (NTRS)

Hassler, B.; Petropavlovskikh, I.; Staehelin, J.; August, T.; Bhartia, P. K.; Clerbaux, C.; Degenstein, D.; Maziere, M. De; Dinelli, B. M.; Dudhia, A.;

Mars Operational Environmental Satellite (MOES): A post-Mars Observer discovery mission

NASA Technical Reports Server (NTRS)

Limaye, Sanjay S.

1993-01-01

Mars Operational Environmental Satellite (MOES) is a Discovery concept mission that is designed to observe the global short-term weather phenomena on Mars in a systematic fashion. Even after the Mariner, Viking, and, soon, Mars Observer missions, crucial aspects of the martian atmosphere will remain unobserved systematically. Achieving a better understanding of the cycles of dust, water vapor, and ices on Mars requires detailed information about atmospheric transports of those quantities associated with the weather systems, particularly those arising in mid latitudes during fall and winter. It also requires a quantitive understanding of the processes responsible for the onset and evolution of dust storms on all scales. Whereas on Earth the system of geosynchronous and polar orbiting satellites provides continuous coverage of the weather systems, on Mars the time history of important events such as regional and global dust storms remains unobserved. To understand the transport of tracers in the martian atmosphere and particularly to identify their sources and sinks, it is necessary to have systematic global, synoptic observations that have yet to be attained. Clearly these requirements are not easy to achieve from a single spacecraft in orbit, but if we focus on specific regions of the planet, e.g., polar vs. low and mid latitudes, then it is possible to attain a nearly ideal coverage at a reasonable spatial and temporal resolution with a system of just two satellites. Mars Observer is about to yield good coverage of the polar latitudes, so we focus initially on the region not covered well in terms of diurnal coverage, and in terms of desired observations will provide the initial data for the numerical models of the martian weather and climate that can be verified only with better temporal and spatial data.

Modeling Dynamics of Cell-to-Cell Variability in TRAIL-Induced Apoptosis Explains Fractional Killing and Predicts Reversible Resistance

PubMed Central

Bertaux, François; Stoma, Szymon; Drasdo, Dirk; Batt, Gregory

2014-01-01

Isogenic cells sensing identical external signals can take markedly different decisions. Such decisions often correlate with pre-existing cell-to-cell differences in protein levels. When not neglected in signal transduction models, these differences are accounted for in a static manner, by assuming randomly distributed initial protein levels. However, this approach ignores the a priori non-trivial interplay between signal transduction and the source of this cell-to-cell variability: temporal fluctuations of protein levels in individual cells, driven by noisy synthesis and degradation. Thus, modeling protein fluctuations, rather than their consequences on the initial population heterogeneity, would set the quantitative analysis of signal transduction on firmer grounds. Adopting this dynamical view on cell-to-cell differences amounts to recast extrinsic variability into intrinsic noise. Here, we propose a generic approach to merge, in a systematic and principled manner, signal transduction models with stochastic protein turnover models. When applied to an established kinetic model of TRAIL-induced apoptosis, our approach markedly increased model prediction capabilities. One obtains a mechanistic explanation of yet-unexplained observations on fractional killing and non-trivial robust predictions of the temporal evolution of cell resistance to TRAIL in HeLa cells. Our results provide an alternative explanation to survival via induction of survival pathways since no TRAIL-induced regulations are needed and suggest that short-lived anti-apoptotic protein Mcl1 exhibit large and rare fluctuations. More generally, our results highlight the importance of accounting for stochastic protein turnover to quantitatively understand signal transduction over extended durations, and imply that fluctuations of short-lived proteins deserve particular attention. PMID:25340343

Validation of satellite-based CI detection of convective storms via backward trajectories

NASA Astrophysics Data System (ADS)

Dietzsch, Felix; Senf, Fabian; Deneke, Hartwig

2013-04-01

Within this study, the rapid development and evolution of several severe convective events is investigated based on geostationary satellite images, and is related to previous findings on suitable detection thresholds for convective initiation. Nine severe events have been selected that occurred over Central Europe in summer 2012, and have been classified into the categories supercell, mesoscale convective system, frontal system and orographic convection. The cases are traced backward starting from the fully developed convective systems to its very beginning initial state using ECMWF data with 0.5 degree spatial resolution and 3h temporal resolution. For every case the storm life cycle was quantified through the storm's infrared (IR) brightness temperatures obtained from Meteosat Second Generation SEVIRI with 5 min temporal resolution and 4.5 km spatial resolution. In addition, cloud products including cloud optical thickness, cloud phase and effective droplet radius have been taken into account. A semi-automatic adjustment of the tracks within a search box was necessary to improve the tracking accuracy and thus the quality of the derived life-cycles. The combination of IR brightness temperatures, IR temperature time trends and satellite-based cloud products revealed different stages of storm development such as updraft intensification and glaciation well in most casesconfirming previously developed CI criteria from other studies. The vertical temperature gradient between 850 and 500 hPa, the Total-Totals-Index and the storm-relative helicity have been derived from ECMWF data and were used to characterize the storm synoptic environment. The results suggest that the storm-relative helicity also influences the life time of convective storms over Central Europe confirming previous studies. Tracking accuracy has shown to be a crucial issue in our study and a fully automated approach is required to enlarge the number of cases for significant statistics.

EnOI-IAU Initialization Scheme Designed for Decadal Climate Prediction System IAP-DecPreS

NASA Astrophysics Data System (ADS)

Wu, Bo; Zhou, Tianjun; Zheng, Fei

2018-02-01

A decadal climate prediction system named as IAP-DecPreS was constructed in the Institute of Atmospheric Physics (IAP), Chinese Academy of Sciences, based on a fully coupled model FGOALS-s2 and a newly developed initialization scheme, referred to as EnOI-IAU. In this paper, we introduce the design of the EnOI-IAU scheme, assess the accuracies of initialization integrations using the EnOI-IAU and preliminarily evaluate hindcast skill of the IAP-DecPreS. The EnOI-IAU scheme integrates two conventional assimilation approaches, ensemble optimal interpolation (EnOI) and incremental analysis update (IAU). The EnOI and IAU were applied to calculate analysis increments and incorporate them into the model, respectively. Three continuous initialization (INIT) runs were conducted for the period of 1950-2015, in which observational sea surface temperature (SST) from the HadISST1.1 and subsurface ocean temperature profiles from the EN4.1.1 data set were assimilated. Then nine-member 10 year long hindcast runs initiated from the INIT runs were conducted for each year in the period of 1960-2005. The accuracies of the INIT runs are evaluated from the following three aspects: upper 700 m ocean temperature, temporal evolution of SST anomalies, and dominant interdecadal variability modes, Pacific Decadal Oscillation (PDO) and Atlantic Multidecadal Oscillation (AMO). Finally, preliminary evaluation of the ensemble mean of the hindcast runs suggests that the IAP-DecPreS has skill in the prediction of the PDO-related SST anomalies in the midlatitude North Pacific and AMO-related SST anomalies in the tropical North Atlantic.

Direct Numerical Simulation of a Temporally Evolving Incompressible Plane Wake: Effect of Initial Conditions on Evolution and Topology

NASA Technical Reports Server (NTRS)

Sondergaard, R.; Cantwell, B.; Mansour, N.

1997-01-01

Direct numerical simulations have been used to examine the effect of the initial disturbance field on the development of three-dimensionality and the transition to turbulence in the incompressible plane wake. The simulations were performed using a new numerical method for solving the time-dependent, three-dimensional, incompressible Navier-Stokes equations in flows with one infinite and two periodic directions. The method uses standard Fast Fourier Transforms and is applicable to cases where the vorticity field is compact in the infinite direction. Initial disturbances fields examined were combinations of two-dimensional waves and symmetric pairs of 60 deg oblique waves at the fundamental, subharmonic, and sub-subharmonic wavelengths. The results of these simulations indicate that the presence of 60 deg disturbances at the subharmonic streamwise wavelength results in the development of strong coherent three-dimensional structures. The resulting strong three-dimensional rate-of-strain triggers the growth of intense fine scale motions. Wakes initiated with 60 deg disturbances at the fundamental streamwise wavelength develop weak coherent streamwise structures, and do not develop significant fine scale motions, even at high Reynolds numbers. The wakes which develop strong three-dimensional structures exhibit growth rates on par with experimentally observed turbulent plane wakes. Wakes which develop only weak three-dimensional structures exhibit significantly lower late time growth rates. Preliminary studies of wakes initiated with an oblique fundamental and a two-dimensional subharmonic, which develop asymmetric coherent oblique structures at the subharmonic wavelength, indicate that significant fine scale motions only develop if the resulting oblique structures are above an angle of approximately 45 deg.

Pre- versus post-mass extinction divergence of Mesozoic marine reptiles dictated by time-scale dependence of evolutionary rates.

PubMed

Motani, Ryosuke; Jiang, Da-Yong; Tintori, Andrea; Ji, Cheng; Huang, Jian-Dong

2017-05-17

The fossil record of a major clade often starts after a mass extinction even though evolutionary rates, molecular or morphological, suggest its pre-extinction emergence (e.g. squamates, placentals and teleosts). The discrepancy is larger for older clades, and the presence of a time-scale-dependent methodological bias has been suggested, yet it has been difficult to avoid the bias using Bayesian phylogenetic methods. This paradox raises the question of whether ecological vacancies, such as those after mass extinctions, prompt the radiations. We addressed this problem by using a unique temporal characteristic of the morphological data and a high-resolution stratigraphic record, for the oldest clade of Mesozoic marine reptiles, Ichthyosauromorpha. The evolutionary rate was fastest during the first few million years of ichthyosauromorph evolution and became progressively slower over time, eventually becoming six times slower. Using the later slower rates, estimates of divergence time become excessively older. The fast, initial rate suggests the emergence of ichthyosauromorphs after the end-Permian mass extinction, matching an independent result from high-resolution stratigraphic confidence intervals. These reptiles probably invaded the sea as a new ecosystem was formed after the end-Permian mass extinction. Lack of information on early evolution biased Bayesian clock rates. © 2017 The Author(s).

The effect of the United States Great Lakes on the maintenance of derecho-producing mesoscale convective systems.

NASA Astrophysics Data System (ADS)

Bentley, M.; Sparks, J.; Graham, R.

2003-04-01

The primary aim of this research is to investigate the influence of the United States Great Lakes on the intensity of mesoscale convective systems (MCSs). One of the greatest nowcast challenges during the warm season is anticipating the impact of the Great Lakes on severe convection, particularly MCSs capable of producing damaging widespread windstorms known as derechos. Since a major derecho activity corridor lies over the Great Lakes region, it is important to understand the effects of the Lakes on the intensity and propagation of severe wind producing MCSs. Specific objectives of the research include: 1) The development of a short-term climatology of MCS events that have impacted the Great Lakes region over the past seven years; 2) An analysis of radar, satellite, surface (including buoy and lighthouse observations), and lake surface temperature data to determine the environmental conditions impacting the evolution of MCSs passing over a Great Lake; 3) An examination of MCS initiation times and seasonal frequencies of occurrence to delineate temporal consistencies in MCS evolution due to changing lake surface temperatures; and 4) The development of conceptual and forecast models to help anticipate MCS intensity and morphology as these systems interact with the Great Lakes environment.

Comparative study of scientific publications in Ophthalmology and Visual Sciences in Argentina, Brazil, Chile, Paraguay and Uruguay (1995-2004).

PubMed

Ragghianti, Carla P; Martínez, Rosa; Martins, Jorge; Gallo, Juan E

2006-01-01

The study aimed to measure the scientific production in Ophthalmology and Vision (O&V) in Argentina, Brazil, Chile, Paraguay and Uruguay over a period of 10 years (1995-2004), in order to find out temporal evolution and variations in this field of research. PubMed / Medline was used to retrieve records on O&V research literature. The search strategy included keywords, country in the affiliation field and publication date. Data were extracted from each citation and recorded in a spreadsheet. Subsequent analysis focused on type and main topic of publication, journals where articles had been published, and evolution of research done on animals and humans. A total of 1,216 citations were retrieved. Brazil had the largest number of authored publications with an average annual production of 82.4, followed by Argentina with 31.0, Chile 6.4, Uruguay 1.6, and Paraguay 0.2. The ratio of articles on O&V relative to publications involving Health Science ranged from 1.0 to 2.3. The frequency of publications almost tripled from 1995 to 2004. Research on humans showed a significant increase in Argentina and Brazil. Results provide initial benchmarks on O&V publication rates in countries in South America that may be useful to follow research trends.

The acacia ants revisited: convergent evolution and biogeographic context in an iconic ant/plant mutualism

PubMed Central

2017-01-01

Phylogenetic and biogeographic analyses can enhance our understanding of multispecies interactions by placing the origin and evolution of such interactions in a temporal and geographical context. We use a phylogenomic approach—ultraconserved element sequence capture—to investigate the evolutionary history of an iconic multispecies mutualism: Neotropical acacia ants (Pseudomyrmex ferrugineus group) and their associated Vachellia hostplants. In this system, the ants receive shelter and food from the host plant, and they aggressively defend the plant against herbivores and competing plants. We confirm the existence of two separate lineages of obligate acacia ants that convergently occupied Vachellia and evolved plant-protecting behaviour, from timid ancestors inhabiting dead twigs in rainforest. The more diverse of the two clades is inferred to have arisen in the Late Miocene in northern Mesoamerica, and subsequently expanded its range throughout much of Central America. The other lineage is estimated to have originated in southern Mesoamerica about 3 Myr later, apparently piggy-backing on the pre-existing mutualism. Initiation of the Pseudomyrmex/Vachellia interaction involved a shift in the ants from closed to open habitats, into an environment with more intense plant herbivory. Comparative studies of the two lineages of mutualists should provide insight into the essential features binding this mutualism. PMID:28298350

Self-similar dynamic converging shocks - I. An isothermal gas sphere with self-gravity

NASA Astrophysics Data System (ADS)

Lou, Yu-Qing; Shi, Chun-Hui

2014-07-01

We explore novel self-similar dynamic evolution of converging spherical shocks in a self-gravitating isothermal gas under conceivable astrophysical situations. The construction of such converging shocks involves a time-reversal operation on feasible flow profiles in self-similar expansion with a proper care for the increasing direction of the specific entropy. Pioneered by Guderley since 1942 but without self-gravity so far, self-similar converging shocks are important for implosion processes in aerodynamics, combustion, and inertial fusion. Self-gravity necessarily plays a key role for grossly spherical structures in very broad contexts of astrophysics and cosmology, such as planets, stars, molecular clouds (cores), compact objects, planetary nebulae, supernovae, gamma-ray bursts, supernova remnants, globular clusters, galactic bulges, elliptical galaxies, clusters of galaxies as well as relatively hollow cavity or bubble structures on diverse spatial and temporal scales. Large-scale dynamic flows associated with such quasi-spherical systems (including collapses, accretions, fall-backs, winds and outflows, explosions, etc.) in their initiation, formation, and evolution are likely encounter converging spherical shocks at times. Our formalism lays an important theoretical basis for pertinent astrophysical and cosmological applications of various converging shock solutions and for developing and calibrating numerical codes. As examples, we describe converging shock triggered star formation, supernova explosions, and void collapses.

Pre- versus post-mass extinction divergence of Mesozoic marine reptiles dictated by time-scale dependence of evolutionary rates

PubMed Central

Ji, Cheng; Huang, Jian-dong

2017-01-01

The fossil record of a major clade often starts after a mass extinction even though evolutionary rates, molecular or morphological, suggest its pre-extinction emergence (e.g. squamates, placentals and teleosts). The discrepancy is larger for older clades, and the presence of a time-scale-dependent methodological bias has been suggested, yet it has been difficult to avoid the bias using Bayesian phylogenetic methods. This paradox raises the question of whether ecological vacancies, such as those after mass extinctions, prompt the radiations. We addressed this problem by using a unique temporal characteristic of the morphological data and a high-resolution stratigraphic record, for the oldest clade of Mesozoic marine reptiles, Ichthyosauromorpha. The evolutionary rate was fastest during the first few million years of ichthyosauromorph evolution and became progressively slower over time, eventually becoming six times slower. Using the later slower rates, estimates of divergence time become excessively older. The fast, initial rate suggests the emergence of ichthyosauromorphs after the end-Permian mass extinction, matching an independent result from high-resolution stratigraphic confidence intervals. These reptiles probably invaded the sea as a new ecosystem was formed after the end-Permian mass extinction. Lack of information on early evolution biased Bayesian clock rates. PMID:28515201

Deducing multiple interfacial dynamics during polymeric foaming.

PubMed

Chandan, Mohammed Rehaan; Naskar, Nilanjon; Das, Anuja; Mukherjee, Rabibrata; Harikrishnan, Gopalakrishna Pillai

2018-06-15

Several interfacial phenomena are active during polymeric foaming, the dynamics of which significantly influence terminal stability, cell structure and in turn the thermo-mechanical properties of temporally evolved foam. Understanding these dynamics is important in achieving desired foam properties. Here, we introduce a method to simultaneously portray the time evolution of bubble growth, lamella thinning and Plateau border drainage, occurring during reactive polymeric foaming. In this method, we initially conduct bulk and surface shear rheology under polymerizing and non-foaming conditions. In a subsequent step, foaming experiments were conducted in a rheometer. The microscopic structural dimensions pertaining to the terminal values of the dynamics of each interfacial phenomena are then measured using a combination of scanning electron microscopy, optical microscopy and imaging ellipsometry, after the foaming is over. The measured surface and bulk rheological parameters are incorporated in time evolution equations that are derived from mass and momentum transport occurring when a model viscoelastic fluid is foamed by gas dispersion. Analytical and numerical solutions to these equations portray the dynamics. We demonstrate this method for a series of reactive polyurethane foams generated from different chemical sources. The effectiveness of our method is in simultaneously obtaining these dynamics that are difficult to directly monitor due to short active durations over multiple length scales.

Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model.

PubMed

Yosef, Ido; Edgar, Rotem; Levy, Asaf; Amitai, Gil; Sorek, Rotem; Munitz, Ariel; Qimron, Udi

2016-04-18

The emergence of mutations following growth-limiting conditions underlies bacterial drug resistance, viral escape from the immune system and fundamental evolution-driven events. Intriguingly, whether mutations are induced by growth limitation conditions or are randomly generated during growth and then selected by growth limitation conditions remains an open question(1). Here, we show that bacteriophage T7 undergoes apparent stress-induced mutagenesis when selected for improved recognition of its host's receptor. In our unique experimental set-up, the growth limitation condition is physically and temporally separated from mutagenesis: growth limitation occurs while phage DNA is outside the host, and spontaneous mutations occur during phage DNA replication inside the host. We show that the selected beneficial mutations are not pre-existing and that the initial slow phage growth is enabled by the phage particle's low-efficiency DNA injection into the host. Thus, the phage particle allows phage populations to initially extend their host range without mutagenesis by virtue of residual recognition of the host receptor. Mutations appear during non-selective intracellular replication, and the frequency of mutant phages increases by natural selection acting on free phages, which are not capable of mutagenesis.

Continued Rapid Uplift at Laguna del Maule Volcanic Field (Chile) from 2007 through 2014

NASA Astrophysics Data System (ADS)

Le Mével, H.; Feigl, K. L.; Cordova, L.; DeMets, C.; Lundgren, P.

2014-12-01

The current rate of uplift at Laguna del Maule (LdM) volcanic field in Chile is among the highest ever observed geodetically for a volcano that is not actively erupting. Using data from interferometric synthetic aperture radar (InSAR) and the Global Positioning System (GPS) recorded at five continuously operating stations, we measure the deformation field with dense sampling in time (1/day) and space (1/hectare). These data track the temporal evolution of the current unrest episode from its inception (sometime between 2004 and 2007) to vertical velocities faster than 200 mm/yr that continue through (at least) July 2014. Building on our previous work, we evaluate the temporal evolution by analyzing data from InSAR (ALOS, TerraSAR-X, TanDEM-X) and GPS [http://dx.doi.org/ 10.1093/gji/ggt438]. In addition, we consider InSAR data from (ERS, ENVISAT, COSMO-Skymed, and UAVSAR), as well as constraints from magneto-telluric (MT), seismic, and gravity surveys. The goal is to test the hypothesis that a recent magma intrusion is feeding a large, existing magma reservoir. What will happen next? To address this question, we analyze the temporal evolution of deformation at other large silicic systems such as Yellowstone, Long Valley, and Three Sisters, during well-studied episodes of unrest. We consider several parameterizations, including piecewise linear, parabolic, and Gaussian functions of time. By choosing the best-fitting model, we expect to constrain the time scales of such episodes and elucidate the processes driving them.

Non-modal theory of the kinetic ion temperature gradient driven instability of plasma shear flows across the magnetic field

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mikhailenko, V. V., E-mail: vladimir@pusan.ac.kr; Mikhailenko, V. S.; Lee, Hae June, E-mail: haejune@pusan.ac.kr

2016-06-15

The temporal evolution of the kinetic ion temperature gradient driven instability and of the related anomalous transport of the ion thermal energy of plasma shear flow across the magnetic field is investigated analytically. This instability develops in a steady plasma due to the inverse ion Landau damping and has the growth rate of the order of the frequency when the ion temperature is equal to or above the electron temperature. The investigation is performed employing the non-modal methodology of the shearing modes which are the waves that have a static spatial structure in the frame of the background flow. Themore » solution of the governing linear integral equation for the perturbed potential displays that the instability experiences the non-modal temporal evolution in the shearing flow during which the unstable perturbation becomes very different from a canonical modal form. It transforms into the non-modal structure with vanishing frequency and growth rate with time. The obtained solution of the nonlinear integral equation, which accounts for the random scattering of the angle of the ion gyro-motion due to the interaction of ions with ensemble of shearing waves, reveals similar but accelerated process of the transformations of the perturbations into the zero frequency structures. It was obtained that in the shear flow the anomalous ion thermal conductivity decays with time. It is a strictly non-modal effect, which originates from the temporal evolution of the shearing modes turbulence.« less

Tracking Local Spatiotemporal Microfracturing Processes and Stress Field Evolution Before and After Laboratory Fault Slip

NASA Astrophysics Data System (ADS)

Kwiatek, G.; Orlecka-Sikora, B.; Goebel, T.; Martínez-Garzón, P.; Dresen, G.; Bohnhoff, M.

2017-12-01

In this study we investigate details of spatial and temporal evolution of the stress field and damage at a pre-existing fault plane in laboratory stick-slip friction experiments performed on Westerly Granite sample. Specimen of 10 cm height and 4 cm diameter was deformed at a constant strain rate of 3×10-6 s-1 and confining pressure of 150 MPa. Here we analyze a series of 6 macroscopic slip events occurring on a rough fault during the course of experiment. Each macroscopic slip was associated with an intense femtoseismic acoustic emission (AE) activity recorded using a 16-channel transient recording system. To monitor the the spatiotemporal damage evolution, and unravel the micromechanical processes governing nucleation and propagation of slip events, we analyzed AE source characteristics (magnitude, seismic moment tensors, focal mechanisms), as well as the statistical properties (b-, c-, d- value) of femtoseismicity. In addition, the calculated AE focal mechanisms were used to reveal the spatiotemporal evolution of local stress field orientations and stress shape ratio coefficients over the fault plane, as well as additional parameters quantifying proximity to failure of individual fault patches. The calculated characteristics are used to comprehensively describe the complexity of the spatial and temporal evolution of the stress over the fault plane, and properties of the corresponding seismicity before and after the macroscopic slips. The observed faulting processes and characteristics are discussed in the context of global strain and stress changes, fault maturation, and earthquake stress drop.

How range shifts induced by climate change affect neutral evolution

PubMed Central

McInerny, G.J.; Turner, J.R.G.; Wong, H.Y.; Travis, J.M.J.; Benton, T.G.

2009-01-01

We investigate neutral evolution during range shifts in a strategic model of a metapopulation occupying a climate gradient. Using heritable, neutral markers, we track the spatio-temporal fate of lineages. Owing to iterated founder effects (‘mutation surfing’), survival of lineages derived from the leading range limit is enhanced. At trailing limits, where habitat suitability decreases, survival is reduced (mutations ‘wipe out’). These processes alter (i) the spatial spread of mutations, (ii) origins of persisting mutations and (iii) the generation of diversity. We show that large changes in neutral evolution can be a direct consequence of range shifting. PMID:19324824

How range shifts induced by climate change affect neutral evolution.

PubMed

McInerny, G J; Turner, J R G; Wong, H Y; Travis, J M J; Benton, T G

2009-04-22

We investigate neutral evolution during range shifts in a strategic model of a metapopulation occupying a climate gradient. Using heritable, neutral markers, we track the spatio-temporal fate of lineages. Owing to iterated founder effects ('mutation surfing'), survival of lineages derived from the leading range limit is enhanced. At trailing limits, where habitat suitability decreases, survival is reduced (mutations 'wipe out'). These processes alter (i) the spatial spread of mutations, (ii) origins of persisting mutations and (iii) the generation of diversity. We show that large changes in neutral evolution can be a direct consequence of range shifting.

Visualization of Spatio-Temporal Relations in Movement Event Using Multi-View

NASA Astrophysics Data System (ADS)

Zheng, K.; Gu, D.; Fang, F.; Wang, Y.; Liu, H.; Zhao, W.; Zhang, M.; Li, Q.

2017-09-01

Spatio-temporal relations among movement events extracted from temporally varying trajectory data can provide useful information about the evolution of individual or collective movers, as well as their interactions with their spatial and temporal contexts. However, the pure statistical tools commonly used by analysts pose many difficulties, due to the large number of attributes embedded in multi-scale and multi-semantic trajectory data. The need for models that operate at multiple scales to search for relations at different locations within time and space, as well as intuitively interpret what these relations mean, also presents challenges. Since analysts do not know where or when these relevant spatio-temporal relations might emerge, these models must compute statistical summaries of multiple attributes at different granularities. In this paper, we propose a multi-view approach to visualize the spatio-temporal relations among movement events. We describe a method for visualizing movement events and spatio-temporal relations that uses multiple displays. A visual interface is presented, and the user can interactively select or filter spatial and temporal extents to guide the knowledge discovery process. We also demonstrate how this approach can help analysts to derive and explain the spatio-temporal relations of movement events from taxi trajectory data.

Maps of Structured Aerosol Activity During the MY 25 Planet-encircling Dust Storm on Mars

NASA Astrophysics Data System (ADS)

Noble, J.; Wilson, R. J.; Cantor, B. A.; Kahre, M. A.; Hollingsworth, J. L.; Bridger, A. F. C.; Haberle, R. M.; Barnes, J.

2016-12-01

We have produced a sequence of 42 global maps from Ls=165.1-187.7° that delimit the areal extent of structured aerosol activity based on a synthesis of Mars Global Surveyor (MGS) data, including Mars Orbiter Camera (MOC) daily global maps (DGMs) and wide angle imagery, Thermal Emission Spectrometer (TES) dust and H2O ice opacity, and Mars general circulation model (MGCM) derived dust opacity. The primary motivation of this work is to examine the temporal and spatial relationship between dust storms observed by MOC and baroclinic eddies inferred from Fast Fourier Synoptic Mapping (FFSM) of TES temperatures in order to study the initiation and evolution of Mars year (MY) 25 planet-encircling dust storm (PDS) precursor phase dust storms. A secondary motivation is to provide improved input to MGCM simulations. Assuming that structured dust storms indicate active dust lifting, these maps allow us to define potential dust lifting regions. This work has two implications for martian atmospheric science. First, integration of MGS data has enabled us to develop improved quantitative and qualitative descriptions of storm evolution that may be used to constrain estimates of dust lifting regions, horizontal dust distribution, and to infer associated circulations. Second, we believe that these maps provide better bases and constraints for modeling storm initiation. Based on our analysis of these MGS data, we propose the following working hypothesis to explain the dynamical processes responsible for PDS initiation and expansion. Six eastward-traveling transient baroclinic eddies triggered the MY 25 precursor storms in Hellas during Ls=176.2-184.6° due to the enhanced dust lifting associated with their low-level wind and stress fields. This was followed by a seventh eddy that contributed to expansion on Ls=186.3°. Increased opacity and temperatures from dust lifting associated with the first three eddies enhanced thermal tides which supported further storm initiation and expansion out of Hellas. Constructive interference of eddies and other circulation components including sublimation flow, anabatic winds (daytime upslope), and diurnal tides may have contributed to storm onset in, and expansion out of Hellas.

Observing large-scale temporal variability of ocean currents by satellite altimetry - With application to the Antarctic circumpolar current

NASA Technical Reports Server (NTRS)

Fu, L.-L.; Chelton, D. B.

1985-01-01

A new method is developed for studying large-scale temporal variability of ocean currents from satellite altimetric sea level measurements at intersections (crossovers) of ascending and descending orbit ground tracks. Using this method, sea level time series can be constructed from crossover sea level differences in small sample areas where altimetric crossovers are clustered. The method is applied to Seasat altimeter data to study the temporal evolution of the Antarctic Circumpolar Current (ACC) over the 3-month Seasat mission (July-October 1978). The results reveal a generally eastward acceleration of the ACC around the Southern Ocean with meridional disturbances which appear to be associated with bottom topographic features. This is the first direct observational evidence for large-scale coherence in the temporal variability of the ACC. It demonstrates the great potential of satellite altimetry for synoptic observation of temporal variability of the world ocean circulation.

On beyond the standard model for high explosives: challenges & obstacles to surmount

DOE Office of Scientific and Technical Information (OSTI.GOV)

Menikoff, Ralph Ds

2009-01-01

Plastic-bonded explosives (PBX) are heterogeneous materials. Nevertheless, current explosive models treat them as homogeneous materials. To compensate, an empirically determined effective burn rate is used in place of a chemical reaction rate. A significant limitation of these models is that different burn parameters are needed for applications in different regimes; for example, shock initiation of a PBX at different initial temperatures or different initial densities. This is due to temperature fluctuations generated when a heterogeneous material is shock compressed. Localized regions of high temperatures are called hot spots. They dominate the reaction for shock initiation. The understanding of hot spotmore » generation and their subsequent evolution has been limited by the inability to measure transients on small spatial ({approx} 1 {micro}m) and small temporal ({approx} 1 ns) scales in the harsh environment of a detonation. With the advances in computing power, it is natural to try and gain an understanding of hot-spot initiation with numerical experiments based on meso-scale simulations that resolve material heterogeneities and utilize realistic chemical reaction rates. However, to capture the underlying physics correctly, such high resolution simulations will require more than fast computers with a large amount of memory. Here we discuss some of the issues that need to be addressed. These include dissipative mechanisms that generate hot spots, accurate thermal propceties for the equations of state of the reactants and products, and controlling numerical entropy error from shock impedance mismatches at material interfaces. The later can generate artificial hot spots and lead to premature reaction. Eliminating numerical hot spots is critical for shock initiation simulations due to the positive feedback between the energy release from reaction and the hydrodynamic flow.« less

Causal relations among events and states in dynamic geographical phenomena

NASA Astrophysics Data System (ADS)

Huang, Zhaoqiang; Feng, Xuezhi; Xuan, Wenling; Chen, Xiuwan

2007-06-01

There is only a static state of the real world to be recorded in conventional geographical information systems. However, there is not only static information but also dynamic information in geographical phenomena. So that how to record the dynamic information and reveal the relations among dynamic information is an important issue in a spatio-temporal information system. From an ontological perspective, we can initially divide the spatio-temporal entities in the world into continuants and occurrents. Continuant entities endure through some extended (although possibly very short) interval of time (e.g., houses, roads, cities, and real-estate). Occurrent entities happen and are then gone (e.g., a house repair job, road construction project, urban expansion, real-estate transition). From an information system perspective, continuants and occurrents that have a unique identity in the system are referred to as objects and events, respectively. And the change is represented implicitly by static snapshots in current spatial temporal information systems. In the previous models, the objects can be considered as the fundamental components of the system, and the change is modeled by considering time-varying attributes of these objects. In the spatio-temporal database, the temporal information that is either interval or instant is involved and the underlying data structures and indexes for temporal are considerable investigated. However, there is the absence of explicit ways of considering events, which affect the attributes of objects or the state. So the research issue of this paper focuses on how to model events in conceptual models of dynamic geographical phenomena and how to represent the causal relations among events and the objects or states. Firstly, the paper reviews the conceptual modeling in a temporal GIS by researchers. Secondly, this paper discusses the spatio-temporal entities: objects and events. Thirdly, this paper investigates the causal relations amongst events and states. The qualitative spatiotemporal change is an important issue in the dynamic geographic-scale phenomena. In real estate transition, the events and states are needed to be represented explicitly. In our modeling the evolution of a dynamic system, it can not avoid fetching in the view of causality. The object's transition is represented by the state of object. Event causes the state of objects changing and causes other events happen. Events connect with objects closely. The basic causal relations are the state-event and event-state relationships. Lastly, the paper concludes with the overview about the causal relations amongst events and states. And this future work is pointed.

Shock initiation of nitromethane

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yoo, C.S.; Holmes, N.C.

1993-12-31

The shock initiation processes of nitromethane have been examined by using a fast time-resolved emission spectroscopy at a two-stage gas gun. a broad, but strong emission has been observed in a spectral range between 350 and 700 nm from shocked nitromethane above 9 GPa. The temporal profile suggests that shocked nitromethane detonates through three characteristic periods, namely an induction period, a hock initiation period, and a thermal explosion period. This paper discusses temporal and chemical characteristics of these periods and present the temperature of the shock-detonating nitromethane at pressures between 9 and 15 GPa.

Hybrid Black-Hole Binary Initial Data

NASA Technical Reports Server (NTRS)

Mundim, Bruno C.; Kelly, Bernard J.; Nakano, Hiroyuki; Zlochower, Yosef; Campanelli, Manuela

2010-01-01

"Traditional black-hole binary puncture initial data is conformally flat. This unphysical assumption is coupled with a lack of radiation signature from the binary's past life. As a result, waveforms extracted from evolutions of this data display an abrupt jump. In Kelly et al. [Class. Quantum Grav. 27:114005 (2010)], a new binary black-hole initial data with radiation contents derived in the post-Newtonian (PN) calculations was adapted to puncture evolutions in numerical relativity. This data satisfies the constraint equations to the 2.5PN order, and contains a transverse-traceless "wavy" metric contribution, violating the standard assumption of conformal flatness. Although the evolution contained less spurious radiation, there were undesired features; the unphysical horizon mass loss and the large initial orbital eccentricity. Introducing a hybrid approach to the initial data evaluation, we significantly reduce these undesired features."

Effect of the stellar spin history on the tidal evolution of close-in planets

NASA Astrophysics Data System (ADS)

Bolmont, E.; Raymond, S. N.; Leconte, J.; Matt, S. P.

2012-08-01

Context. The spin rate of stars evolves substantially during their lifetime, owing to the evolution of their internal structure and to external torques arising from the interaction of stars with their environments and stellar winds. Aims: We investigate how the evolution of the stellar spin rate affects, and is affected by, planets in close orbits via star-planet tidal interactions. Methods: We used a standard equilibrium tidal model to compute the orbital evolution of single planets orbiting both Sun-like stars and very low-mass stars (0.1 M⊙). We tested two stellar spin evolution profiles, one with fast initial rotation (1.2 day rotation period) and one with slow initial rotation (8 day period). We tested the effect of varying the stellar and planetary dissipations, and the planet's mass and initial orbital radius. Results: For Sun-like stars, the different tidal evolution between initially rapidly and slowly rotating stars is only evident for extremely close-in gas giants orbiting highly dissipative stars. However, for very low-mass stars the effect of the initial rotation of the star on the planet's evolution is apparent for less massive (1 M⊕) planets and typical dissipation values. We also find that planetary evolution can have significant effects on the stellar spin history. In particular, when a planet falls onto the star, it can cause the star to spin up. Conclusions: Tidal evolution allows us to differentiate between the early behaviors of extremely close-in planets orbiting either a rapidly rotating star or a slowly rotating star. The early spin-up of the star allows the close-in planets around fast rotators to survive the early evolution. For planets around M-dwarfs, surviving the early evolution means surviving on Gyr timescales, whereas for Sun-like stars the spin-down brings about late mergers of Jupiter planets. In the light of this study, we can say that differentiating one type of spin evolution from another given the present position of planets can be very tricky. Unless we can observe some markers of former evolution, it is nearly impossible to distinguish the two very different spin profiles, let alone intermediate spin-profiles. Nevertheless, some conclusions can still be drawn about statistical distributions of planets around fully convective M-dwarfs. If tidal evolution brings about a merger late in the stellar history, it can also entail a noticeable acceleration of the star at late ages, so that it is possible to have old stars that spin rapidly. This raises the question of how the age of stars can be more tightly constrained.

Declarative Programming with Temporal Constraints, in the Language CG.

PubMed

Negreanu, Lorina

2015-01-01

Specifying and interpreting temporal constraints are key elements of knowledge representation and reasoning, with applications in temporal databases, agent programming, and ambient intelligence. We present and formally characterize the language CG, which tackles this issue. In CG, users are able to develop time-dependent programs, in a flexible and straightforward manner. Such programs can, in turn, be coupled with evolving environments, thus empowering users to control the environment's evolution. CG relies on a structure for storing temporal information, together with a dedicated query mechanism. Hence, we explore the computational complexity of our query satisfaction problem. We discuss previous implementation attempts of CG and introduce a novel prototype which relies on logic programming. Finally, we address the issue of consistency and correctness of CG program execution, using the Event-B modeling approach.

Temporally resolved proton radiography of rapidly varying electric and magnetic fields in laser-driven capacitor coil targets

NASA Astrophysics Data System (ADS)

Morace, A.; Santos, J. J.; Bailly-Grandvaux, M.; Ehret, M.; Alpinaniz, J.; Brabetz, C.; Schaumann, G.; Volpe, L.

2017-02-01

Understanding the dynamics of rapidly varying electromagnetic fields in intense short pulse laser plasma interactions is of key importance to understand the mechanisms at the basis of a wide variety of physical processes, from high energy density physics and fusion science to the development of ultrafast laser plasma devices to control laser-generated particle beams. Target normal sheath accelerated (TNSA) proton radiography represents an ideal tool to diagnose ultrafast electromagnetic phenomena, providing 2D spatially and temporally resolved radiographs with temporal resolution varying from 2-3 ps to few tens of ps. In this work we introduce the proton radiography technique and its application to diagnose the spatial and temporal evolution of electromagnetic fields in laser-driven capacitor coil targets.

Atmospheric response to anomalous autumn surface forcing in the Arctic Basin

NASA Astrophysics Data System (ADS)

Cassano, Elizabeth N.; Cassano, John J.

2017-09-01

Data from four reanalyses are analyzed to evaluate the downstream atmospheric response both spatially and temporally to anomalous autumn surface forcing in the Arctic Basin. Running weekly mean skin temperature anomalies were classified using the self-organizing map algorithm. The resulting classes were used to both composite the initial atmospheric state and determine how the atmosphere evolves from this state. The strongest response was to anomalous forcing—positive skin temperature and total surface energy flux anomalies and reduced sea ice concentration—in the Barents and Kara Seas. Analysis of the evolution of the atmospheric state for 12 weeks after the initial forcing showed a persistence in the anomalies in this area which led to a buildup of heat in the atmosphere. This resulted in positive 1000-500 hPa thickness and high-pressure circulation anomalies in this area which were associated with cold air advection and temperatures over much of central and northern Asia. Evaluation of days with the opposite forcing (i.e., negative skin temperature anomalies and increased sea ice concentration in the Barents and Kara Seas) showed a mirrored, opposite downstream atmospheric response. Other patterns with positive skin temperature anomalies in the Arctic Basin did not show the same response most likely because the anomalies were not as strong nor did they persist for as many weeks following the initial forcing.

Feature saltation and the evolution of mimicry.

PubMed

Gamberale-Stille, Gabriella; Balogh, Alexandra C V; Tullberg, Birgitta S; Leimar, Olof

2012-03-01

In Batesian mimicry, a harmless prey species imitates the warning coloration of an unpalatable model species. A traditional suggestion is that mimicry evolves in a two-step process, in which a large mutation first achieves approximate similarity to the model, after which smaller changes improve the likeness. However, it is not known which aspects of predator psychology cause the initial mutant to be perceived by predators as being similar to the model, leaving open the question of how the crucial first step of mimicry evolution occurs. Using theoretical evolutionary simulations and reconstruction of examples of mimicry evolution, we show that the evolution of Batesian mimicry can be initiated by a mutation that causes prey to acquire a trait that is used by predators as a feature to categorize potential prey as unsuitable. The theory that species gain entry to mimicry through feature saltation allows us to formulate scenarios of the sequence of events during mimicry evolution and to reconstruct an initial mimetic appearance for important examples of Batesian mimicry. Because feature-based categorization by predators entails a qualitative distinction between nonmimics and passable mimics, the theory can explain the occurrence of imperfect mimicry. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

Time-Resolved O3 Chemical Chain Reaction Kinetics Via High-Resolution IR Laser Absorption Methods

NASA Technical Reports Server (NTRS)

Kulcke, Axel; Blackmon, Brad; Chapman, William B.; Kim, In Koo; Nesbitt, David J.

1998-01-01

Excimer laser photolysis in combination with time-resolved IR laser absorption detection of OH radicals has been used to study O3/OH(v = 0)/HO2 chain reaction kinetics at 298 K, (i.e.,(k(sub 1) is OH + 03 yields H02 + 02 and (k(sub 2) is H02 + 03 yields OH + 202). From time-resolved detection of OH radicals with high-resolution near IR laser absorption methods, the chain induction kinetics have been measured at up to an order of magnitude higher ozone concentrations ([03] less than or equal to 10(exp 17) molecules/cu cm) than accessible in previous studies. This greater dynamic range permits the full evolution of the chain induction, propagation, and termination process to be temporally isolated and measured in real time. An exact solution for time-dependent OH evolution under pseudo- first-order chain reaction conditions is presented, which correctly predicts new kinetic signatures not included in previous OH + 03 kinetic analyses. Specifically, the solutions predict an initial exponential loss (chain "induction") of the OH radical to a steady-state level ([OH](sub ss)), with this fast initial decay determined by the sum of both chain rate constants, k(sub ind) = k(sub 1) + k(sub 2). By monitoring the chain induction feature, this sum of the rate constants is determined to be k(sub ind) = 8.4(8) x 10(exp -14) cu cm/molecule/s for room temperature reagents. This is significantly higher than the values currently recommended for use in atmospheric models, but in excellent agreement with previous results from Ravishankara et al.

INVESTIGATING TWO SUCCESSIVE FLUX ROPE ERUPTIONS IN A SOLAR ACTIVE REGION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cheng, X.; Zhang, J.; Ding, M. D.

2013-06-01

We investigate two successive flux rope (FR1 and FR2) eruptions resulting in two coronal mass ejections (CMEs) on 2012 January 23. Both flux ropes (FRs) appeared as an EUV channel structure in the images of high temperature passbands of the Atmospheric Imaging Assembly prior to the CME eruption. Through fitting their height evolution with a function consisting of linear and exponential components, we determine the onset time of the FR impulsive acceleration with high temporal accuracy for the first time. Using this onset time, we divide the evolution of the FRs in the low corona into two phases: a slowmore » rise phase and an impulsive acceleration phase. In the slow rise phase of FR1, the appearance of sporadic EUV and UV brightening and the strong shearing along the polarity inverse line indicates that the quasi-separatrix-layer reconnection likely initiates the slow rise. On the other hand, for FR2, we mainly contribute its slow rise to the FR1 eruption, which partially opened the overlying field and thus decreased the magnetic restriction. At the onset of the impulsive acceleration phase, FR1 (FR2) reaches the critical height of 84.4 ± 11.2 Mm (86.2 ± 13.0 Mm) where the decline of the overlying field with height is fast enough to trigger the torus instability. After a very short interval (∼2 minutes), the flare emission began to enhance. These results reveal the compound activity involving multiple magnetic FRs and further suggest that the ideal torus instability probably plays the essential role of initiating the impulsive acceleration of CMEs.« less

Hyperspectral, photogrammetric and morphological characterization of surface impurities over the Greenland ice sheet from remote sensing observations

NASA Astrophysics Data System (ADS)

Tedesco, M.; Alexander, P. M.; Briggs, K.; Linares, M.; Mote, T. L.

2016-12-01

The spatial and temporal evolution of surface impurities over the Greenland ice sheet plays a crucial role in modulating the meltwater production in view of the associated feedback on albedo. Recent studies have pointed to a `darkening' of the west portion of the ice sheet with this reduction in albedo likely associated with the increasing presence of surface impurities (e.g., soot, dust) and biological activity (e.g., cryoconite holes, algae, bacteria). Regional climate models currently do not account for the presence, evolution and impact on albedo of such impurities, mostly because the underlying processes driving the spectral and morphological evolution of impurities are poorly known. One for the reasons for this is the lack of hyperspectral and high-spatial resolution data over specific regions of the Greenland ice sheet. To put things in perspective: there is more hyperspectral data at high spatial resolution for the planet Mars than for the Greenland ice sheet. In this presentation, we report the results of an analysis using the few available hyperspectral data collected over Greenland by the HYPERION and AVIRIS sensors, in conjunction with visible (RGB) helicopter-based high resolution images and LANDSAT/WorldView data for characterizing the spectral and morphological evolution of surface impurities and cryoconite holes over western Greenland. The hyperspectral data is used to characterize the abundance of different `endmembers' and the temporal evolution (inter-seasonal and intra-seasonal) of surface impurities composition and concentration. Digital photographs from helicopter are used to characterize the size and distribution of cryoconite holes as a function of elevation and, lastly, LANDSAT/WV images are used to study the evolution of `mysterious' shapes that form as a consequence of the accumulation of impurities and the ice flow.

From Dinosaurs to Modern Bird Diversity: Extending the Time Scale of Adaptive Radiation

PubMed Central

Moen, Daniel; Morlon, Hélène

2014-01-01

What explains why some groups of organisms, like birds, are so species rich? And what explains their extraordinary ecological diversity, ranging from large, flightless birds to small migratory species that fly thousand of kilometers every year? These and similar questions have spurred great interest in adaptive radiation, the diversification of ecological traits in a rapidly speciating group of organisms. Although the initial formulation of modern concepts of adaptive radiation arose from consideration of the fossil record, rigorous attempts to identify adaptive radiation in the fossil record are still uncommon. Moreover, most studies of adaptive radiation concern groups that are less than 50 million years old. Thus, it is unclear how important adaptive radiation is over temporal scales that span much larger portions of the history of life. In this issue, Benson et al. test the idea of a “deep-time” adaptive radiation in dinosaurs, compiling and using one of the most comprehensive phylogenetic and body-size datasets for fossils. Using recent phylogenetic statistical methods, they find that in most clades of dinosaurs there is a strong signal of an “early burst” in body-size evolution, a predicted pattern of adaptive radiation in which rapid trait evolution happens early in a group's history and then slows down. They also find that body-size evolution did not slow down in the lineage leading to birds, hinting at why birds survived to the present day and diversified. This paper represents one of the most convincing attempts at understanding deep-time adaptive radiations. PMID:24802950

One-dimensional evolution of the upper water column in the Atlantic sector of the Arctic Ocean in winter

NASA Astrophysics Data System (ADS)

Fer, Ilker; Peterson, Algot K.; Randelhoff, Achim; Meyer, Amelie

2017-03-01

A one-dimensional model is employed to reproduce the observed time evolution of hydrographic properties in the upper water column during winter, between 26 January and 11 March 2015, in a region north of Svalbard in the Nansen Basin of the Arctic Ocean. From an observed initial state, vertical diffusion equations for temperature and salinity give the hydrographic conditions at a later stage. Observations of microstructure are used to synthesize profiles of vertical diffusivity, K, representative of varying wind forcing conditions. The ice-ocean heat and salt fluxes at the ice-ocean interface are implemented as external source terms, estimated from the salt and enthalpy budgets, using friction velocity from the Rossby similarity drag relation, and the ice core temperature profiles. We are able to reproduce the temporal evolution of hydrography satisfactorily for two pairs of measured profiles, suggesting that the vertical processes dominated the observed changes. Sensitivity tests reveal a significant dependence on K. Variation in other variables, such as the temperature gradient of the sea ice, the fraction of heat going to ice melt, and the turbulent exchange coefficient for heat, are relatively less important. The increase in salinity as a result of freezing and brine release is approximately 10%, significantly less than that due to entrainment (90%) from beneath the mixed layer. Entrainment was elevated during episodic storm events, leading to melting. The results highlight the contribution of storms to mixing in the upper Arctic Ocean and its impact on ice melt and mixed-layer salt and nutrient budgets.

Constraints on millisecond magnetars as the engines of prompt emission in gamma-ray bursts

NASA Astrophysics Data System (ADS)

Beniamini, Paz; Giannios, Dimitrios; Metzger, Brian D.

2017-12-01

We examine millisecond magnetars as central engines of gamma-ray bursts' (GRBs) prompt emission. Using the protomagnetar wind model of Metzger et al., we estimate the temporal evolution of the magnetization and power injection at the base of the GRB jet and apply these to different prompt emission models to make predictions for the GRB energetics, spectra and light curves. We investigate both shock and magnetic reconnection models for the particle acceleration, as well as the effects of energy dissipation across optically thick and thin regions of the jet. The magnetization at the base of the jet, σ0, is the main parameter driving the GRB evolution in the magnetar model and the emission is typically released for 100 ≲σ0 ≲3000. Given the rapid increase in σ0 as the protomagnetar cools and its neutrino-driven mass loss subsides, the GRB duration is typically limited to ≲100 s. This low baryon loading at late times challenges magnetar models for ultralong GRBs, though black hole models likely run into similar difficulties without substantial entrainment from the jet walls. The maximum radiated gamma-ray energy is ≲5 × 1051 erg, significantly less than the magnetar's total initial rotational energy and in strong tension with the high end of the observed GRB energy distribution. However, the gradual magnetic dissipation model applied to a magnetar central engine, naturally explains several key observables of typical GRBs, including energetics, durations, stable peak energies, spectral slopes and a hard to soft evolution during the burst.

Active visual search in non-stationary scenes: coping with temporal variability and uncertainty

NASA Astrophysics Data System (ADS)

Ušćumlić, Marija; Blankertz, Benjamin

2016-02-01

Objective. State-of-the-art experiments for studying neural processes underlying visual cognition often constrain sensory inputs (e.g., static images) and our behavior (e.g., fixed eye-gaze, long eye fixations), isolating or simplifying the interaction of neural processes. Motivated by the non-stationarity of our natural visual environment, we investigated the electroencephalography (EEG) correlates of visual recognition while participants overtly performed visual search in non-stationary scenes. We hypothesized that visual effects (such as those typically used in human-computer interfaces) may increase temporal uncertainty (with reference to fixation onset) of cognition-related EEG activity in an active search task and therefore require novel techniques for single-trial detection. Approach. We addressed fixation-related EEG activity in an active search task with respect to stimulus-appearance styles and dynamics. Alongside popping-up stimuli, our experimental study embraces two composite appearance styles based on fading-in, enlarging, and motion effects. Additionally, we explored whether the knowledge obtained in the pop-up experimental setting can be exploited to boost the EEG-based intention-decoding performance when facing transitional changes of visual content. Main results. The results confirmed our initial hypothesis that the dynamic of visual content can increase temporal uncertainty of the cognition-related EEG activity in active search with respect to fixation onset. This temporal uncertainty challenges the pivotal aim to keep the decoding performance constant irrespective of visual effects. Importantly, the proposed approach for EEG decoding based on knowledge transfer between the different experimental settings gave a promising performance. Significance. Our study demonstrates that the non-stationarity of visual scenes is an important factor in the evolution of cognitive processes, as well as in the dynamic of ocular behavior (i.e., dwell time and fixation duration) in an active search task. In addition, our method to improve single-trial detection performance in this adverse scenario is an important step in making brain-computer interfacing technology available for human-computer interaction applications.