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Sample records for inorganic carbon uptake

  1. Carbon uptake in low dissolved inorganic carbon environments: the effect of limited carbon availability on photosynthetic organisms in thermal waters

    NASA Astrophysics Data System (ADS)

    Myers, K. D.; Omelon, C. R.; Bennett, P.

    2010-12-01

    Photosynthesis is the primary carbon fixation process in thermal waters below 70°C, but some hydrothermal waters have extremely low dissolved inorganic carbon (DIC), potentially limiting the growth of inorganic carbon fixing organisms such as algae and cyanobacteria. To address the issue of how carbon is assimilated by phototrophs in these environments, we conducted experiments to compare inorganic carbon uptake mechanisms by two phylogenetically distinct organisms collected from geographically distinct carbon limited systems: the neutral pH geothermal waters of El Tatio, Chile, and the acidic geothermal waters of Tantalus Creek in Norris Geyser Basin, Yellowstone National Park. Discharge waters at El Tatio have low total DIC concentrations (2 to 6 ppm) found mainly as HCO3-; this is in contrast to even lower measured DIC values in Tantalus Creek (as low as 0.13 ppm) that, due to a measured pH of 2.5, exists primarily as CO2. Cyanobacteria and algae are innately physiologically plastic, and we are looking to explore the possibility that carbon limitation in these environments is extreme enough to challenge that plasticity and lead to a suite of carbon uptake adaptations. We hypothesize that these microorganisms utilize adaptive modes of Ci uptake that allow them to survive under these limiting conditions. Cyanobacteria (primarily Synechococcus spp.) isolated from El Tatio can utilize either passive CO2 uptake or active HCO3- uptake mechanisms, in contrast to the eukaryotic alga Cyanidium spp. from Tantalus Creek, which is restricted to an energy-dependent CO2 uptake mechanism. To test this hypothesis, we conducted pH drift experiments (Omelon et al., 2008) to examine changes in pH and [DIC] under a range of pH and [DIC] culture conditions. This work provides baseline information upon which we will begin to investigate the effects of low [DIC] on the growth of phototrophs collected from these and other less carbon limited systems.

  2. Inorganic carbon uptake during photosynthesis. II. Uptake by isolated Asparagus mesophyll cells during isotopic disequilibrium. [Asparagus sprengeri

    SciTech Connect

    Espie, G.S.; Owttrim, G.W.; Colman, B.

    1986-04-01

    The species of inorganic carbon (CO/sub 2/ or HCO/sub 3//sup -/) taken up as a source of substrate for photosynthetic fixation by isolated Asparagus sprengeri mesophyll cells is investigated. Discrimination between CO/sub 2/ or HCO/sub 3//sup -/ transport, during steady state photosynthesis, is achieved by monitoring the changes (by /sup 14/C fixation) which occur in the specific activity of the intracellular pool of inorganic carbon when the inorganic carbon present in the suspending medium is in a state of isotopic disequilibrium. Quantitative comparisons between theoretical (CO/sub 2/ or HCO/sub 3//sup -/ transport) and experimental time-courses of /sup 14/C incorporation, over the pH range of 5.2 to 7.5, indicate that the specific activity of extracellular CO/sub 2/, rather than HCO/sub 3//sup -/, is the appropriate predictor of the intracellular specific activity. It is concluded, therefore, that CO/sub 2/ is the major source of exogenous inorganic carbon taken up by Asparagus cells. However, at high pH (8.5), a component of net DIC uptake may be attributable to HCO/sub 3//sup -/ transport, as the incorporation of /sup 14/C during isotopic disequilibrium exceeds the maximum possible incorporation predicted on the basis of CO/sub 2/ uptake alone. The contribution of HCO/sub 3//sup -/ to net inorganic carbon uptake (pH 8.5) is variable, ranging from 5 to 16%, but is independent of the extracellular HCO/sub 3//sup -/ concentration. The evidence for direct HCO/sub 3//sup -/ transport is subject to alternative explanations and must, therefore, be regarded as equivocal. Nonlinear regression analysis of the rate of /sup 14/C incorporation as a function of time indicates the presence of a small extracellular resistance to the diffusion of CO/sub 2/, which is partially alleviated by a high extracellular concentration of HCO/sub 3//sup -/.

  3. Dissolved inorganic carbon enhanced growth, nutrient uptake, and lipid accumulation in wastewater grown microalgal biofilms.

    PubMed

    Kesaano, Maureen; Gardner, Robert D; Moll, Karen; Lauchnor, Ellen; Gerlach, Robin; Peyton, Brent M; Sims, Ronald C

    2015-03-01

    Microalgal biofilms grown to evaluate potential nutrient removal options for wastewaters and feedstock for biofuels production were studied to determine the influence of bicarbonate amendment on their growth, nutrient uptake capacity, and lipid accumulation after nitrogen starvation. No significant differences in growth rates, nutrient removal, or lipid accumulation were observed in the algal biofilms with or without bicarbonate amendment. The biofilms possibly did not experience carbon-limited conditions because of the large reservoir of dissolved inorganic carbon in the medium. However, an increase in photosynthetic rates was observed in algal biofilms amended with bicarbonate. The influence of bicarbonate on photosynthetic and respiration rates was especially noticeable in biofilms that experienced nitrogen stress. Medium nitrogen depletion was not a suitable stimulant for lipid production in the algal biofilms and as such, focus should be directed toward optimizing growth and biomass productivities to compensate for the low lipid yields and increase nutrient uptake. PMID:25585252

  4. Dissolved inorganic carbon enhanced growth, nutrient uptake, and lipid accumulation in wastewater grown microalgal biofilms.

    PubMed

    Kesaano, Maureen; Gardner, Robert D; Moll, Karen; Lauchnor, Ellen; Gerlach, Robin; Peyton, Brent M; Sims, Ronald C

    2015-03-01

    Microalgal biofilms grown to evaluate potential nutrient removal options for wastewaters and feedstock for biofuels production were studied to determine the influence of bicarbonate amendment on their growth, nutrient uptake capacity, and lipid accumulation after nitrogen starvation. No significant differences in growth rates, nutrient removal, or lipid accumulation were observed in the algal biofilms with or without bicarbonate amendment. The biofilms possibly did not experience carbon-limited conditions because of the large reservoir of dissolved inorganic carbon in the medium. However, an increase in photosynthetic rates was observed in algal biofilms amended with bicarbonate. The influence of bicarbonate on photosynthetic and respiration rates was especially noticeable in biofilms that experienced nitrogen stress. Medium nitrogen depletion was not a suitable stimulant for lipid production in the algal biofilms and as such, focus should be directed toward optimizing growth and biomass productivities to compensate for the low lipid yields and increase nutrient uptake.

  5. Recently fixed carbon allocation in strawberry plants and concurrent inorganic nitrogen uptake through arbuscular mycorrhizal fungi.

    PubMed

    Tomè, Elisabetta; Tagliavini, Massimo; Scandellari, Francesca

    2015-05-01

    Most crop species form a symbiotic association with arbuscular mycorrhizal (AM) fungi, receiving plant photosynthate and exchanging nutrients from the soil. The plant carbon (C) allocation to AM fungi and the nitrogen feedback are rarely studied together. In this study, a dual (13)CO2 and (15)NH4(15)NO3 pulse labeling experiment was carried out to determine the allocation of recent photosynthates to mycorrhizal hyphae and the translocation of N absorbed by hyphae to strawberry plants. Plants were grown in pots in which a 50 μm mesh net allowed the physical separation of the mycorrhizal hyphae from the roots in one portion of the pot. An inorganic source of (15)N was added to the hyphal compartment at the same time of the (13)CO2 pulse labeling. One and seven days after pulse labeling, the plants were destructively harvested and the amount of the recently fixed carbon (C) and of the absorbed N was determined. (13)C allocated to belowground organs such as roots and mycorrhizal hyphae accounted for an average of 10%, with 4.3% allocated to mycorrhizal hyphae within the first 24h after the pulse labeling. Mycorrhizae absorbed labeled inorganic nitrogen, of which almost 23% was retained in the fungal mycelium. The N uptake was linearly correlated with the (13)C fixed by the plants suggesting a positive correlation between a plant photosynthetic rate and the hyphal absorption capacity. PMID:25841208

  6. Dissolved inorganic carbon speciation in aquatic environments and its application to monitor algal carbon uptake.

    PubMed

    Chen, Yimin; Zhang, Liang; Xu, Changan; Vaidyanathan, Seetharaman

    2016-01-15

    Dissolved inorganic carbon (DIC) speciation is an important parameter that enables chemical and ecological changes in aquatic environments, such as the aquatic environmental impact of increasing atmospheric CO2 levels, to be monitored. We have examined and developed a sensitive and cost-effective 'back-titration' method to determine the DIC species and abundance in aqueous environments that is more accurate and reproducible than existing methods and is applicable in a range of fresh, brackish and sea waters. We propose the use of pHHCO3 (bicarbonate-dominant pH) and pH3.5 as the titration end points in the back-titration technique to accurately determine carbonate alkalinity. The proposed method has a higher accuracy and precision than other modified Gran's methods that are currently in use. The detection limit was found to be ~5 μmol kg(-1) with an accuracy within 1% and a precision (CV) within 0.2% and 0.5% at high and low level of carbonates, respectively. This method was successfully applied to monitor DIC in the aqueous medium of Nannochlopsis salina cultivation separately carried out with NaHCO3 and CO2 as the respective inorganic carbon source. The cells were able to grow in the NaHCO3 medium with a similar growth curve to cells with 0.039% CO2 (air). Increases in CO2 level stimulated lipid accumulation by diverting the fixed carbon from protein to lipids. The increased concentration of gaseous CO2 and the accompanying lower pH appears to significantly inhibit the growth of algae despite the presence of HCO3(-) when 20% CO2 was employed.

  7. Synergistic effects of dissolved organic carbon and inorganic nitrogen on methane uptake in forest soils without and with freezing treatment.

    PubMed

    Wu, Haohao; Xu, Xingkai; Duan, Cuntao; Li, Tuansheng; Cheng, Weiguo

    2016-01-01

    There is limited knowledge about how the interaction of dissolved organic carbon (DOC) and inorganic nitrogen (N) released into the soil just after freezing can affect methane (CH4) uptake in forest soils. Here, we present how freezing treatment and glucose, as a DOC source, can affect the roles of NH4(+)-N and NO3(-)-N in inhibiting soil CH4 uptake, by using soil-core incubation experiments. A long-term freezing at low temperature reduced cumulative CH4 uptake in the soils sampled from two temperate forest stands without carbon (C) and N addition. The inhibition effects of N addition as NH4Cl and KNO3 on the soil CH4 uptake were much larger than C addition. Freezing treatment eliminated the inhibition effect of NH4Cl and KNO3 addition on CH4 uptake, and this response was affected by glucose addition and forest types. The addition of glucose eliminated the inhibition effect of NO3(-)-N on CH4 uptake in the forest soils without and with freezing treatment, while the addition of NH4(+)-N and glucose inhibited synergistically the soil CH4 uptake. The results highlight the importance of synergistic effects of DOC and N inputs on the soil CH4 uptake under forest stands during soil wetting and thawing periods. PMID:27572826

  8. Synergistic effects of dissolved organic carbon and inorganic nitrogen on methane uptake in forest soils without and with freezing treatment

    PubMed Central

    Wu, Haohao; Xu, Xingkai; Duan, Cuntao; Li, Tuansheng; Cheng, Weiguo

    2016-01-01

    There is limited knowledge about how the interaction of dissolved organic carbon (DOC) and inorganic nitrogen (N) released into the soil just after freezing can affect methane (CH4) uptake in forest soils. Here, we present how freezing treatment and glucose, as a DOC source, can affect the roles of NH4+-N and NO3−-N in inhibiting soil CH4 uptake, by using soil-core incubation experiments. A long-term freezing at low temperature reduced cumulative CH4 uptake in the soils sampled from two temperate forest stands without carbon (C) and N addition. The inhibition effects of N addition as NH4Cl and KNO3 on the soil CH4 uptake were much larger than C addition. Freezing treatment eliminated the inhibition effect of NH4Cl and KNO3 addition on CH4 uptake, and this response was affected by glucose addition and forest types. The addition of glucose eliminated the inhibition effect of NO3−-N on CH4 uptake in the forest soils without and with freezing treatment, while the addition of NH4+-N and glucose inhibited synergistically the soil CH4 uptake. The results highlight the importance of synergistic effects of DOC and N inputs on the soil CH4 uptake under forest stands during soil wetting and thawing periods. PMID:27572826

  9. Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria.

    PubMed

    Gaudana, Sandeep B; Zarzycki, Jan; Moparthi, Vamsi K; Kerfeld, Cheryl A

    2015-10-01

    Cyanobacteria have evolved a carbon-concentrating mechanism (CCM) which has enabled them to inhabit diverse environments encompassing a range of inorganic carbon (Ci: [Formula: see text] and CO2) concentrations. Several uptake systems facilitate inorganic carbon accumulation in the cell, which can in turn be fixed by ribulose 1,5-bisphosphate carboxylase/oxygenase. Here we survey the distribution of genes encoding known Ci uptake systems in cyanobacterial genomes and, using a pfam- and gene context-based approach, identify in the marine (alpha) cyanobacteria a heretofore unrecognized number of putative counterparts to the well-known Ci transporters of beta cyanobacteria. In addition, our analysis shows that there is a huge repertoire of transport systems in cyanobacteria of unknown function, many with homology to characterized Ci transporters. These can be viewed as prospective targets for conversion into ancillary Ci transporters through bioengineering. Increasing intracellular Ci concentration coupled with efforts to increase carbon fixation will be beneficial for the downstream conversion of fixed carbon into value-added products including biofuels. In addition to CCM transporter homologs, we also survey the occurrence of rhodopsin homologs in cyanobacteria, including bacteriorhodopsin, a class of retinal-binding, light-activated proton pumps. Because they are light driven and because of the apparent ease of altering their ion selectivity, we use this as an example of re-purposing an endogenous transporter for the augmentation of Ci uptake by cyanobacteria and potentially chloroplasts.

  10. Uptake of Inorganic Carbon by Isolated Chloroplasts of the Unicellular Green Alga Chlorella ellipsoidea1

    PubMed Central

    Rotatore, Caterina; Colman, Brian

    1990-01-01

    Chloroplasts, isolated from protoplasts of the green alga, Chlorella ellipsoidea, were estimated to be 99% intact by the ferricyanide-reduction assay, and gave CO2 and PGA-dependent rates of O2 evolution of 64.5 to 150 micromoles per milligram of chlorophyll per hour, that is 30 to 70% of the photosynthetic activity of the parent cells. Intact chloroplasts showed no carbonic anhydrase activity, but it was detected in preparations of ruptured organelles. Rates of photosynthesis, measured in a closed system at pH 7.5, were twice the calculated rate of CO2 supply from the uncatalyzed dehydration of HCO3− indicating a direct uptake of bicarbonate by the intact chloroplasts. Mass spectrometric measurements of CO2 depletion from the medium on the illumination of chloroplasts indicate the lack of an active CO2 transport across the chloroplast envelope. PMID:16667662

  11. Dissolved inorganic carbon uptake in Thiomicrospira crunogena XCL-2 is Δp- and ATP-sensitive and enhances RubisCO-mediated carbon fixation.

    PubMed

    Menning, Kristy J; Menon, Balaraj B; Fox, Gordon; Scott, Kathleen M

    2016-03-01

    The gammaproteobacterium Thiomicrospira crunogena XCL-2 is an aerobic sulfur-oxidizing hydrothermal vent chemolithoautotroph that has a CO2 concentrating mechanism (CCM), which generates intracellular dissolved inorganic carbon (DIC) concentrations much higher than extracellular, thereby providing substrate for carbon fixation at sufficient rate. This CCM presumably requires at least one active DIC transporter to generate the elevated intracellular concentrations of DIC measured in this organism. In this study, the half-saturation constant (K CO2) for purified carboxysomal RubisCO was measured (276 ± 18 µM) which was much greater than the K CO2 of whole cells (1.03 µM), highlighting the degree to which the CCM facilitates CO2 fixation under low CO2 conditions. To clarify the bioenergetics powering active DIC uptake, cells were incubated in the presence of inhibitors targeting ATP synthesis (DCCD) or proton potential (CCCP). Incubations with each of these inhibitors resulted in diminished intracellular ATP, DIC, and fixed carbon, despite an absence of an inhibitory effect on proton potential in the DCCD-incubated cells. Electron transport complexes NADH dehydrogenase and the bc 1 complex were found to be insensitive to DCCD, suggesting that ATP synthase was the primary target of DCCD. Given the correlation of DIC uptake to the intracellular ATP concentration, the ABC transporter genes were targeted by qRT-PCR, but were not upregulated under low-DIC conditions. As the T. crunogena genome does not include orthologs of any genes encoding known DIC uptake systems, these data suggest that a novel, yet to be identified, ATP- and proton potential-dependent DIC transporter is active in this bacterium. This transporter serves to facilitate growth by T. crunogena and other Thiomicrospiras in the many habitats where they are found.

  12. Strains of the Harmful Cyanobacterium Microcystis aeruginosa Differ in Gene Expression and Activity of Inorganic Carbon Uptake Systems at Elevated CO2 Levels

    PubMed Central

    Sandrini, Giovanni; Jakupovic, Dennis; Matthijs, Hans C. P.

    2015-01-01

    Cyanobacteria are generally assumed to be effective competitors at low CO2 levels because of their efficient CO2-concentrating mechanism (CCM), and yet how bloom-forming cyanobacteria respond to rising CO2 concentrations is less clear. Here, we investigate changes in CCM gene expression at ambient CO2 (400 ppm) and elevated CO2 (1,100 ppm) in six strains of the harmful cyanobacterium Microcystis. All strains downregulated cmpA encoding the high-affinity bicarbonate uptake system BCT1, whereas both the low- and high-affinity CO2 uptake genes were expressed constitutively. Four strains downregulated the bicarbonate uptake genes bicA and/or sbtA, whereas two strains showed constitutive expression of the bicA-sbtA operon. In one of the latter strains, a transposon insert in bicA caused low bicA and sbtA transcript levels, which made this strain solely dependent on BCT1 for bicarbonate uptake. Activity measurements of the inorganic carbon (Ci) uptake systems confirmed the CCM gene expression results. Interestingly, genes encoding the RuBisCO enzyme, structural carboxysome components, and carbonic anhydrases were not regulated. Hence, Microcystis mainly regulates the initial uptake of inorganic carbon, which might be an effective strategy for a species experiencing strongly fluctuating Ci concentrations. Our results show that CCM gene regulation of Microcystis varies among strains. The observed genetic and phenotypic variation in CCM responses may offer an important template for natural selection, leading to major changes in the genetic composition of harmful cyanobacterial blooms at elevated CO2. PMID:26319871

  13. Expression of genes involved in the uptake of inorganic carbon in the gill of a deep-sea vesicomyid clam harboring intracellular thioautotrophic bacteria.

    PubMed

    Hongo, Yuki; Ikuta, Tetsuro; Takaki, Yoshihiro; Shimamura, Shigeru; Shigenobu, Shuji; Maruyama, Tadashi; Yoshida, Takao

    2016-07-10

    Deep-sea vesicomyid clams, including the genus Phreagena (formerly Calyptogena), harbor thioautotrophic bacterial symbionts in the host symbiosome, which consists of cytoplasmic vacuoles in gill epithelial cells called bacteriocytes. The symbiont requires inorganic carbon (Ci), such as CO2, HCO3(-), and CO3(2-), to synthesize organic compounds, which are utilized by the host clam. The dominant Ci in seawater is HCO3(-), which is impermeable to cell membranes. Within the bacteriocyte, cytoplasmic carbonic anhydrase (CA) from the host, which catalyzes the inter-conversion between CO2 and HCO3(-), has been shown to be abundant and is thought to supply intracellular CO2 to symbionts in the symbiosome. However, the mechanism of Ci uptake by the host gill from seawater is poorly understood. To elucidate the influx pathway of Ci into the bacteriocyte, we isolated the genes related to Ci uptake via the pyrosequencing of cDNA from the gill of Phreagena okutanii, and investigated their expression patterns. Using phylogenetic and amino acid sequence analyses, three solute carrier family 4 (SLC4) bicarbonate transporters (slc4co1, slc4co2, and slc4co4) and two membrane-associated CAs (mcaco1 and mcaco2) were identified as candidate genes for Ci uptake. In an in situ hybridization analysis of gill sections, the expression of mcaco1 and mcaco2 was detected in the bacteriocytes and asymbiotic non-ciliated cells, respectively, and the expression of slc4co1 and slc4co2 was detected in the asymbiotic cells, including the intermediate cells of the inner area and the non-ciliated cells of the external area. Although subcellular localizations of the products of these genes have not been fully elucidated, they may play an important role in the uptake of Ci into the bacteriocytes. These findings will improve our understanding of the Ci transport system in the symbiotic relationships of chemosynthetic bivalves. PMID:27016297

  14. Estimating the compensation irradiance in the ocean: The importance of accounting for non-photosynthetic uptake of inorganic carbon

    NASA Astrophysics Data System (ADS)

    Laws, Edward A.; Letelier, Ricardo M.; Karl, David M.

    2014-11-01

    The compensation irradiance, the irradiance at which net photosynthesis is zero over a 24-h period, was estimated at station ALOHA (22°45‧N, 158°W) from analysis of 14C uptake rates measured from 8 January 1989 to 13 June 1990 at depths ranging from 5 to 175 m. The estimates were made on the basis of linear regressions of the difference between light bottle and dark bottle 14C uptake in the light-limited region of the euphotic zone and determination of the depth at which the difference between the uptake rates was zero. About half of the non-photosynthetic 14C uptake at the compensation irradiance could be attributed to chemolithoautotrophy; the remainder was presumably due to anaplerotic processes. Deriving the compensation irradiance by extrapolating dawn-to-dawn light-bottle uptake above the compensation irradiance to zero resulted in underestimation of the compensation irradiance by a factor of 2. We estimated the compensation irradiance at station ALOHA to be 0.054 mol-photons m-2 d-1, about 0.11% of surface 400-700 nm radiation and 1% of surface 475-nm (blue) light.

  15. Reactive uptake of N2O5 to internally mixed inorganic and organic particles: the role of organic carbon oxidation state and inferred organic phase separations

    NASA Astrophysics Data System (ADS)

    Gaston, C. J.; Thornton, J. A.; Ng, N. L.

    2014-06-01

    We measured N2O5 reactive uptake onto mixed organic/inorganic submicron particles using organic compounds with a variety of oxidation states (using mainly atomic O : C ratios as a proxy) and molecular weights. The organic mass fraction, organic molecular composition, and relative humidity (RH) were varied to assess their effects separately on the N2O5 uptake coefficient, γ(N2O5). At a constant RH, mixtures of organic components having an O : C < 0.5 with ammonium bisulfate significantly suppressed the uptake of N2O5(g) compared to pure ammonium bisulfate, even at small organic mass fractions (e.g., ≤ 15%). The effect of the organic component became less pronounced at higher RH. In general, highly oxygenated organic components (O : C > 0.8) had a smaller or even negligible impact on N2O5(g) uptake at all RHs probed; however, a few exceptions were observed. Notably, γ(N2O5) for mixtures of ammonium bisulfate with polyethylene glycol (PEG), PEG-300 (O : C = 0.56), decreased nearly linearly as the PEG mass fraction increased at constant RH until leveling off at the value measured for pure PEG. The response of γ(N2O5) to increasing PEG mass fraction was similar to that measured on ambient atmospheric particles as a function of organic mass fraction. The effects of the organic mass fraction on γ(N2O5), for mixtures having an O : C < ~0.8, were best described using a standard resistor model of reactive uptake assuming the particles had an RH-dependent inorganic core-organic shell morphology. This model suggests that the N2O5 diffusivity and/or solubility in the organic layer is up to a factor of 20 lower compared to aqueous solution particles, and that the diffusivity, solubility, and reactivity of N2O5 within organic coatings and particles depend upon both RH and the molecular composition of the organic medium. We use these dependencies and ambient measurements of organic aerosol from the global aerosol mass spectrometry (AMS) database to show that the typical

  16. Reactive uptake of N2O5 to internally mixed inorganic and organic particles: the role of organic carbon oxidation state and inferred organic phase separations

    NASA Astrophysics Data System (ADS)

    Gaston, C. J.; Thornton, J. A.; Ng, N. L.

    2013-12-01

    We measured N2O5 reactive uptake onto mixed organic/inorganic submicron particles using organic compounds with a variety of oxidation states (using mainly atomic O : C ratios as a proxy) and molecular weights. The organic mass fraction, organic molecular composition, and relative humidity (RH) were varied to separately assess their effect on the N2O5 uptake coefficient, γ(N2O5). At a constant RH, mixtures of organic components having an O : C < 0.5 with ammonium bisulfate (ABS) significantly suppressed the uptake of N2O 0.8) had a smaller or even negligible impact on N2O5 uptake at all RHs probed; however, a few exceptions were observed. Notably, γ(N2O5) for mixtures of ABS with polyethylene glycol (PEG), PEG-300 (O : C = 0.56), decreased nearly linearly as the PEG mass fraction increased at constant RH until leveling off at the value measured on pure PEG. The response of γ(N2O5) to increasing PEG mass fraction was similar to that measured on ambient atmospheric particles as a function of organic mass fraction. The effects of the organic mass fraction on γ(N2O5), for mixtures having an O : C < ~ 0.8, were best described using a standard resistor model of reactive uptake assuming the particles had a RH dependent inorganic core-organic shell morphology. This model suggests that the N2O5 diffusivity and/or solubility in the organic layer is up to a factor of 20 lower compared to aqueous solution particles, and that the diffusivity, solubility, and reactivity of N2O5 within organic coatings and particles depend upon both RH and the molecular composition of the organic medium. We use these dependencies and ambient measurements of organic aerosol from the global aerosol mass spectrometry (AMS) database to show that the typical impact of organic aerosol

  17. Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH.

    PubMed

    Fernández, Pamela A; Hurd, Catriona L; Roleda, Michael Y

    2014-12-01

    Macrocystis pyrifera is a widely distributed, highly productive, seaweed. It is known to use bicarbonate (HCO3 (-) ) from seawater in photosynthesis and the main mechanism of utilization is attributed to the external catalyzed dehydration of HCO3 (-) by the surface-bound enzyme carbonic anhydrase (CAext ). Here, we examined other putative HCO3 (-) uptake mechanisms in M. pyrifera under pHT 9.00 (HCO3 (-) : CO2  = 940:1) and pHT 7.65 (HCO3 (-) : CO2  = 51:1). Rates of photosynthesis, and internal CA (CAint ) and CAext activity were measured following the application of AZ which inhibits CAext , and DIDS which inhibits a different HCO3 (-) uptake system, via an anion exchange (AE) protein. We found that the main mechanism of HCO3 (-) uptake by M. pyrifera is via an AE protein, regardless of the HCO3 (-) : CO2 ratio, with CAext making little contribution. Inhibiting the AE protein led to a 55%-65% decrease in photosynthetic rates. Inhibiting both the AE protein and CAext at pHT 9.00 led to 80%-100% inhibition of photosynthesis, whereas at pHT 7.65, passive CO2 diffusion supported 33% of photosynthesis. CAint was active at pHT 7.65 and 9.00, and activity was always higher than CAext , because of its role in dehydrating HCO3 (-) to supply CO2 to RuBisCO. Interestingly, the main mechanism of HCO3 (-) uptake in M. pyrifera was different than that in other Laminariales studied (CAext -catalyzed reaction) and we suggest that species-specific knowledge of carbon uptake mechanisms is required in order to elucidate how seaweeds might respond to future changes in HCO3 (-) :CO2 due to ocean acidification.

  18. Contrasting modes of inorganic carbon acquisition amongst Symbiodinium (Dinophyceae) phylotypes.

    PubMed

    Brading, Patrick; Warner, Mark E; Smith, David J; Suggett, David J

    2013-10-01

    Growing concerns over ocean acidification have highlighted the need to critically understand inorganic carbon acquisition and utilization in marine microalgae. Here, we contrast these characteristics for the first time between two genetically distinct dinoflagellate species of the genus Symbiodinium (phylotypes A13 and A20) that live in symbiosis with reef-forming corals. Both phylotypes were grown in continuous cultures under identical environmental conditions. Rubisco was measured using quantitative Western blots, and radioisotopic (14) C uptake was used to characterize light- and total carbon dioxide (TCO2 )-dependent carbon fixation, as well as inorganic carbon species preference and external carbonic anhydrase activity. A13 and A20 exhibited similar rates of carbon fixation despite cellular concentrations of Rubisco being approximately four-fold greater in A13. The uptake of CO2 over HCO3 - was found to support the majority of carbon fixation in both phylotypes. However, A20 was also able to indirectly utilize HCO3 - by first converting it to CO2 via external carbonic anhydrase. These results show that adaptive differences in inorganic carbon acquisition have evolved within the Symbiodinium genus, which thus carries fundamental implications as to how this functionally key genus will respond to ocean acidification, but could also represent a key trait factor that influences their productivity when in hospite of their coral hosts.

  19. (Inorganic carbon surveys of oceanic basins)

    SciTech Connect

    Wilke, R.J.

    1991-04-25

    Measurements were made aboard the F. S. Meteor, along the 19 degree South cruise track of the following chemical parameters: total dissolved inorganic carbon, pH, pCO2, CFC-12, CFC-11, CFC-113, CC14. This was the first cruise of OASD's newly formed CO2 group. The purpose was to survey World Ocean Circulation Experiment (WOCE) line A9 for inorganic carbon for the Department of Energy's Office of CO2 Research. 1 fig.

  20. Ocean uptake of carbon dioxide

    SciTech Connect

    Peng, Tsung-Hung; Takahashi, Taro

    1993-06-01

    Factors controlling the capacity of the ocean for taking up anthropogenic C0{sup 2} include carbon chemistry, distribution of alkalinity, pCO{sup 2} and total concentration of dissolved C0{sup 2}, sea-air pCO{sup 2} difference, gas exchange rate across the sea-air interface, biological carbon pump, ocean water circulation and mixing, and dissolution of carbonate in deep sea sediments. A general review of these processes is given and models of ocean-atmosphere system based on our understanding of these regulating processes axe used to estimate the magnitude of C0{sup 2} uptake by the ocean. We conclude that the ocean can absorb up to 35% of the fossil fuel emission. Direct measurements show that 55% Of C0{sup 2} from fossil fuel burning remains in the atmosphere. The remaining 10% is not accounted for by atmospheric increases and ocean uptake. In addition, it is estimated that an amount equivalent to 30% of recent annual fossil fuel emissions is released into the atmosphere as a result of deforestation and farming. To balance global carbon budget, a sizable carbon sink besides the ocean is needed. Storage of carbon in terrestrial biosphere as a result of C0{sup 2} fertilization is a potential candidate for such missing carbon sinks.

  1. Ocean uptake of carbon dioxide

    SciTech Connect

    Peng, Tsung-Hung ); Takahashi, Taro . Lamont-Doherty Earth Observatory)

    1993-01-01

    Factors controlling the capacity of the ocean for taking up anthropogenic C0[sup 2] include carbon chemistry, distribution of alkalinity, pCO[sup 2] and total concentration of dissolved C0[sup 2], sea-air pCO[sup 2] difference, gas exchange rate across the sea-air interface, biological carbon pump, ocean water circulation and mixing, and dissolution of carbonate in deep sea sediments. A general review of these processes is given and models of ocean-atmosphere system based on our understanding of these regulating processes axe used to estimate the magnitude of C0[sup 2] uptake by the ocean. We conclude that the ocean can absorb up to 35% of the fossil fuel emission. Direct measurements show that 55% Of C0[sup 2] from fossil fuel burning remains in the atmosphere. The remaining 10% is not accounted for by atmospheric increases and ocean uptake. In addition, it is estimated that an amount equivalent to 30% of recent annual fossil fuel emissions is released into the atmosphere as a result of deforestation and farming. To balance global carbon budget, a sizable carbon sink besides the ocean is needed. Storage of carbon in terrestrial biosphere as a result of C0[sup 2] fertilization is a potential candidate for such missing carbon sinks.

  2. Microalgal carbon-dioxide-concentrating mechanisms: Chlamydomonas inorganic carbon transporters.

    PubMed

    Spalding, Martin H

    2008-01-01

    Aquatic photosynthetic micro-organisms have adapted to the variable and often-limiting availability of CO(2), and inorganic carbon (Ci) in general, by development of inducible CO(2)-concentrating mechanisms (CCMs) that allow them to optimize carbon acquisition. Both microalgal and cyanobacterial CCMs function to facilitate CO(2) assimilation when Ci is limiting via active Ci uptake systems to increase internal Ci accumulation and carbonic anhydrase activity to provide elevated internal CO(2) concentrations through the dehydration of accumulated bicarbonate. These CCMs have been studied over several decades, and details of the cyanobacterial CCM function have emerged over recent years. However, significant advances in understanding of the microalgal CCM have been more recent. With the aid of mutational approaches and the availability of multiple microalgal genome sequences, an integrated picture of the functional components of the microalgal CCMs is emerging, together with the molecular details regarding the function and regulation of the CCM. This review will focus on the recent advances in identifying and characterizing the Ci transport components of the microalgal CCM, especially in the model organism Chlamydomonas reinhardtii Dangeard.

  3. Simulating the effects of light intensity and carbonate system composition on particulate organic and inorganic carbon production in Emiliania huxleyi.

    PubMed

    Holtz, Lena-Maria; Wolf-Gladrow, Dieter; Thoms, Silke

    2015-05-01

    Coccolithophores play an important role in the marine carbon cycle. Variations in light intensity and external carbonate system composition alter intracellular carbon fluxes and therewith the production rates of particulate organic and inorganic carbon. Aiming to find a mechanistic explanation for the interrelation between dissolved inorganic carbon fluxes and particulate carbon production rates, we develop a numerical cell model for Emiliania huxleyi, one of the most abundant coccolithophore species. The model consists of four cellular compartments, for each of which the carbonate system is resolved dynamically. The compartments are connected to each other and to the external medium via substrate fluxes across the compartment-confining membranes. By means of the model we are able to explain several pattern observed in particulate organic and inorganic carbon production rates for different strains and under different acclimation conditions. Particulate organic and inorganic carbon production rates for instance decrease at very low external CO2 concentrations. Our model suggests that this effect is caused mainly by reduced HCO3(-) uptake rates, not by CO2 limitation. The often observed decrease in particulate inorganic carbon production rates under Ocean Acidification is explained by a downregulation of cellular HCO3(-) uptake.

  4. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2012-04-01

    Soil-borne amino acids may constitute a source of nitrogen (N) for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and ammonium (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake, thereby resulting in similar total N uptake rates. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were generally about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50% of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic N.

  5. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2011-11-01

    Soil-borne amino acids may constitute a nitrogen (N) source for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50 % of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic nitrogen.

  6. THE UPTAKE OF INORGANIC ELECTROLYTES BY THE CRAYFISH

    PubMed Central

    Maluf, N. S. Rustum

    1940-01-01

    1. Reasons are given for believing that the uptake of Na+, Cl-, and NaCl by the crayfish occurs through the gills. 2. A crayfish in fresh water, with a Cl concentration of about 0.2 mEq./l., can) by active Cl absorption, compensate entirely for Cl lost in the urine. 3. The carbonic anhydrase activity of the gills is markedly higher than that of other tissues of the crayfish, but the equivalent CO2 output of the crayfish is far in excess of the equivalent Cl absorption per unit time and weight and thus fails to warrant the supposition that Cl absorption is of respiratory importance. 4. The carbonic anhydrase activity of the soft integument of the lobster, before and after molting, and of the hypodermis of the hard-cuticled animal is almost identical and of the same order as that of other tissues of the lobster. 5. The concentration of the electrolytes was about 7.5 mEq./l.; i.e., considerably lower than in the blood of the crayfish. Cl- can be taken up independently of the complementary cation. Na+ can be taken up independently of the complementary anion. K+ and SO4= are not taken up at all. In pure NaCl, the Na+ and Cl- are absorbed evidently largely together. Ca++ is absorbed only in newly molted animals and in animals preparing to molt but is not absorbed by hard-cuticled animals not preparing to molt. Ca++ is taken up independently of Cl- in pure CaCl2. 6. Newly molted animals absorb Ca++ at a rate exceeding that of the absorption of other absorbable ions (Na+ and Cl-) in the same equivalent concentration. 7. A crayfish utilizes the Ca++ in fresh water in the calcification of its cuticle. Since the animal does not swallow water, the Ca++ must enter through the exterior. Reasons are given for believing that, unlike Na+ and Cl-, Ca++ is absorbed directly from the exterior by the integument and does not enter the body through the gills. 8. During molting, only about 4 per cent of the raw ash and 2.3 per cent of the organic material of the old cuticle is resorbed

  7. Carbon dioxide removal with inorganic membranes

    SciTech Connect

    Judkins, R.R.; Fain, D.E.

    1993-12-31

    The increasing concentrations of greenhouse gases, particularly carbon dioxide, in the atmosphere has sparked a great deal of interest in the removal of CO{sub 2} from flue gases of fossil fueled plants. Presently, several techniques for the removal of CO{sub 2} are considered to have potential, but are lacking in practicality. For example, amine scrubbing of flue gas streams is potential, but are lacking in practically. For example, amine scrubbing of flue gas streams is effective in removing CO{sub 2}, but costs are high; efficiency suffers; and other acid gases must be removed prior to amine stripping. Membrane systems for CO{sub 2} removal are held in high regard, and inorganic, particularly ceramic, membranes offer the potential for high temperature, thus energy saving, removal.

  8. In situ spectrophotometric measurement of dissolved inorganic carbon in seawater

    USGS Publications Warehouse

    Liua, Xuewu; Byrne, Robert H.; Adornato, Lori; Yates, Kimberly K.; Kaltenbacher, Eric; Ding, Xiaoling; Yang, Bo

    2013-01-01

    Autonomous in situ sensors are needed to document the effects of today’s rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accuracy and resolution. SEAS-DIC is a new in situ instrument designed to provide calibrated, high-frequency, long-term measurements of DIC in marine and fresh waters. Sample water is first acidified to convert all DIC to carbon dioxide (CO2). The sample and a known reagent solution are then equilibrated across a gas-permeable membrane. Spectrophotometric measurement of reagent pH can thereby determine the sample DIC over a wide dynamic range, with inherent calibration provided by the pH indicator’s molecular characteristics. Field trials indicate that SEAS-DIC performs well in biofouling and turbid waters, with a DIC accuracy and precision of ∼2 μmol kg–1 and a measurement rate of approximately once per minute. The acidic reagent protects the sensor cell from biofouling, and the gas-permeable membrane excludes particulates from the optical path. This instrument, the first spectrophotometric system capable of automated in situ DIC measurements, positions DIC to become a key parameter for in situ CO2-system characterizations.

  9. In situ spectrophotometric measurement of dissolved inorganic carbon in seawater.

    PubMed

    Liu, Xuewu; Byrne, Robert H; Adornato, Lori; Yates, Kimberly K; Kaltenbacher, Eric; Ding, Xiaoling; Yang, Bo

    2013-10-01

    Autonomous in situ sensors are needed to document the effects of today's rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accuracy and resolution. SEAS-DIC is a new in situ instrument designed to provide calibrated, high-frequency, long-term measurements of DIC in marine and fresh waters. Sample water is first acidified to convert all DIC to carbon dioxide (CO2). The sample and a known reagent solution are then equilibrated across a gas-permeable membrane. Spectrophotometric measurement of reagent pH can thereby determine the sample DIC over a wide dynamic range, with inherent calibration provided by the pH indicator's molecular characteristics. Field trials indicate that SEAS-DIC performs well in biofouling and turbid waters, with a DIC accuracy and precision of ∼2 μmol kg(-1) and a measurement rate of approximately once per minute. The acidic reagent protects the sensor cell from biofouling, and the gas-permeable membrane excludes particulates from the optical path. This instrument, the first spectrophotometric system capable of automated in situ DIC measurements, positions DIC to become a key parameter for in situ CO2-system characterizations.

  10. Analytical electron microscopy of biogenic and inorganic carbonates

    NASA Technical Reports Server (NTRS)

    Blake, David F.

    1989-01-01

    In the terrestrial sedimentary environment, the mineralogically predominant carbonates are calcite-type minerals (rhombohedral carbonates) and aragonite-type minerals (orthorhombic carbonates). Most common minerals precipitating either inorganically or biogenically are high magnesium calcite and aragonite. High magnesium calcite (with magnesium carbonate substituting for more than 7 mole percent of the calcium carbonate) is stable only at temperatures greater than 700 C or thereabouts, and aragonite is stable only at pressures exceeding several kilobars of confining pressure. Therefore, these carbonates are expected to undergo chemical stabilization in the diagenetic environment to ultimately form stable calcite and dolomite. Because of the strong organic control of carbonate deposition in organisms during biomineralization, the microchemistry and microstructure of invertebrate skeletal material is much different than that present in inorganic carbonate cements. The style of preservation of microstructural features in skeletal material is therefore often quite distinctive when compared to that of inorganic carbonate even though wholesale recrystallization of the sediment has taken place. Microstructural and microchemical comparisons are made between high magnesium calcite echinoderm skeletal material and modern inorganic high magnesium calcite inorganic cements, using analytical electron microscopy and related techniques. Similar comparisons are made between analogous materials which have undergone stabilization in the diagenetic environment. Similar analysis schemes may prove useful in distinguishing between biogenic and inorganic carbonates in returned Martian carbonate samples.

  11. Autonomous Sensing of Particulate Inorganic Carbon Dynamics

    NASA Astrophysics Data System (ADS)

    Weiss, G. A.; Bishop, J. K.; Strubhar, W. D.; Wood, T.

    2011-12-01

    Particulate inorganic carbon (PIC) is produced by coccolithophore phytoplankton and shelled foraminifera and pterpod microzooplankton. These calcite and aragonite particles contribute to excess density of aggregate particles enabling carbon export from surface waters; they are sensitive to the effects of ocean acidification. Concentrations in surface waters range from below 100 nM in oligotrophic waters to 40 uM in the North Atlantic. Very limited ship observations in the Oyashio and subarctic NE Pacific show short term PIC variability of more than one order of magitude over 10 days and 3 months, respectively. At depth concentrations can drop to near zero in waters deeper than the carbonate saturation horizon. Seasonal variations of a factor of two or more at 1000 m depth have been observed. Near surface variability is impossible to follow from ships. We are working on the development of a robust PIC sensor capable of deployment on platforms ranging from CTD's to floats and thus address the gap in observations. The sensor, which uses cross polarized optics, detects the photons that have interacted with birefringent minerals (of which calcite dominates) in the water column. The detection of this very weak signal - which can be 10-6 of the primary beam energy is a daunting task. Here we report results from incomparison deployments of a 'next gen' and prototype sensor during recent expeditions to California coastal and offshore waters (NE Pacific Gyre, Santa Barbara Basin (June 2009); Santa Catalina Basin (October 2010), Santa Cruz Basin (May 2011), California Current and Coastal Waters (July 2011; September 2011). In addition we report calibrations the sensors based on particulate samples filtered from 1L samples and analyzed by HR-ICP-MS.

  12. 75 FR 29534 - Inorganic Nitrates-Nitrite, Carbon and Carbon Dioxide, and Sulfur Registration Review; Draft...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-26

    ... AGENCY Inorganic Nitrates-Nitrite, Carbon and Carbon Dioxide, and Sulfur Registration Review; Draft... and carbon dioxide, and gas cartridge uses of sulfur, and opens a public comment period on this... occur for all inorganic nitrates- nitrites, carbon and carbon dioxide uses, as well as gas...

  13. Carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii: inorganic carbon transport and CO2 recapture.

    PubMed

    Wang, Yingjun; Duanmu, Deqiang; Spalding, Martin H

    2011-09-01

    Many microalgae are capable of acclimating to CO(2) limited environments by operating a CO(2) concentrating mechanism (CCM), which is driven by various energy-coupled inorganic carbon (Ci; CO(2) and HCO(3)(-)) uptake systems. Chlamydomonas reinhardtii (hereafter, Chlamydomonas), a versatile genetic model organism, has been used for several decades to exemplify the active Ci transport in eukaryotic algae, but only recently have many molecular details behind these Ci uptake systems emerged. Recent advances in genetic and molecular approaches, combined with the genome sequencing of Chlamydomonas and several other eukaryotic algae have unraveled some unique characteristics associated with the Ci uptake mechanism and the Ci-recapture system in eukaryotic microalgae. Several good candidate genes for Ci transporters in Chlamydomonas have been identified, and a few specific gene products have been linked with the Ci uptake systems associated with the different acclimation states. This review will focus on the latest studies on characterization of functional components involved in the Ci uptake and the Ci-recapture in Chlamydomonas.

  14. Incorporation of inorganic carbon by Antarctic cryptoendolithic fungi

    NASA Technical Reports Server (NTRS)

    Palmer, R. J. Jr; Friedmann, E. I.

    1988-01-01

    Fungi isolated from the cryptoendolithic community of the Ross Desert are capable of fixing inorganic carbon. Results suggest that lichen mycobionts and parasymbionts are adapted to different water regimes in the cryptoendolithic environment.

  15. Polyamine Uptake, Kinetics, and Competition among Polyamines and between Polyamines and Inorganic Cations.

    PubMed

    Pistocchi, R; Bagni, N; Creus, J A

    1986-02-01

    Polyamine uptake, the kinetics of this uptake, and the competition among polyamines and between polyamines and inorganic cations were studied in petals of Saintpaulia ionantha Wendl. Uptake experiments using (14)C-labeled polyamines were carried out on single petals, at room temperaure (20 degrees C) and in the light. The results show that putrescine, spermidine, and spermine uptake was dependent on the external pH and occurred up to high external polyamine concentrations with K(m) values of 8.6, 1.2, and 2.1 millimolar, respectively, with spermidine being the most absorbed at low concentration (17 micromolar). Putrescine and spermidine did not seem to compete for the same site of absorption. Furthermore, putrescine and spermidine uptake was not inhibited by Ca(2+), Mg(2+), and K(+) at the same concentrations (17 micromolar), whereas 1.7 millimolar Ca(2+) inhibited and K(+) enhanced spermidine uptake. The intracellular localization of the absorbed putrescine was determined using two different methods. Very little label was found in the apoplast, while most of it was localized in the 98,500g supernatant. According to our data the vacuole, which represents a substantial part of Saintpaulia parenchyma cells, could be a site of putrescine accumulation. 2,4-Dinitrophenol and diethylstilbestrol did not inhibit uptake; however, at 0 degrees C there was a 35% inhibition of spermidine uptake, compared with the controls kept at 20 degrees C as well as a 68% inhibition with 20 millimolar NaSCN. PMID:16664661

  16. Properties of Mutants of Synechocystis sp. Strain PCC 6803 Lacking Inorganic Carbon Sequestration Systems

    SciTech Connect

    Xu, Min; Bernat, Gabor; Singh, Abhay K.; Mi, Hualing; Rogner, Matthias; Pakrasi, Himadri B.; Ogawa, Teruo

    2008-09-10

    A mutant ( 5) of Synechocystis sp. strain PCC 6803 constructed by inactivating five inorganic carbon sequestration systems did not take up CO2 or HCO3– and was unable to grow in air with or without glucose. The 4 mutant in which BicA is the only active inorganic carbon sequestration system showed low activity of HCO3– uptake and grew under these conditions but more slowly than the wild-type strain. The 5 mutant required 1.7% CO2 to attain half the maximal growth rate. Electron transport activity of the mutants was strongly inhibited under high light intensities, with the 5 mutant more susceptible to high light than the 4 mutant. The results implicated the significance of carbon sequestration in dissipating excess light energy.

  17. Patterns of inorganic phosphate uptake in Cassiopea xamachana: a bioindicator species.

    PubMed

    Todd, Brian D; Thornhill, Daniel J; Fitt, William K

    2006-05-01

    Nutrient levels in the nearshore waters of the Florida Keys have increased over the past few decades concomitant with a decline in the health of Florida's reef system. Phosphorus is a particular concern in the Florida Keys as it may be the limiting nutrient in nearshore waters. We demonstrate that the upside-down jellyfish, Cassiopea xamachana, decreases its rate of phosphate uptake following exposure to elevated levels of dissolved inorganic phosphate. We also show that this subsequent suppression of uptake rates persists for some time following exposure to elevated phosphates. Using these attributes, we experimentally investigated the use of C. xamachana as a bioindicator for dissolved inorganic phosphates in seawater. Our results show that these animals reveal comparative differences in environmental phosphates despite traditional testing methods yielding no detectable phosphates. We propose that C. xamachana is a bioindicator useful for integrating relevant information about phosphate availability in low nutrient environments. PMID:16288929

  18. Solute-specific scaling of inorganic nitrogen and phosphorus uptake in streams

    NASA Astrophysics Data System (ADS)

    Hall, R. O., Jr.; Baker, M. A.; Rosi-Marshall, E. J.; Tank, J. L.; Newbold, J. D.

    2013-11-01

    Stream ecosystem processes such as nutrient cycling may vary with stream position in the network. Using a scaling approach, we examined the relationship between stream size and nutrient uptake length, which represents the mean distance that a dissolved solute travels prior to removal from the water column. Ammonium (NH4+) uptake length increased proportionally with stream size measured as specific discharge (discharge/stream width) with a scaling exponent = 1.01. In contrast, uptake lengths for nitrate (NO3-) and soluble reactive phosphorus (SRP) increased more rapidly than increases in specific discharge (scaling exponents = 1.19 for NO3- and 1.35 for SRP). Additionally, the ratio of inorganic nitrogen (N) uptake length to SRP uptake length declined with stream size; there was relatively lower demand for SRP compared to N as stream size increased. Finally, we related the scaling of uptake length with specific discharge to that of stream length using Hack's law and downstream hydraulic geometry. Ammonium uptake length increased less than proportionally with distance from the headwaters, suggesting a strong role for larger streams and rivers in regulating nutrient transport.

  19. Radiocarbon: analysis of inorganic carbon of fossil bone and enamel.

    PubMed

    Haynes, V

    1968-08-16

    Carbon dioxide from calcium carbonate in fossil bone can be selectively separated from carbon dioxide in bone apatite by hydrolyzing the sample first in acetic acid and then in hydrochloric acid. Radiocarbon analyses of the inorganic carbon dioxide in three samples of known age clearly show calcium carbonate in fossil bone to be secondary and the carbonate of bone apatite to be indigenous and suitable for dating in some cases. Agreement between dates on collagen-bone apatite pairs increases the level of confidence.

  20. Carbons for battery anodes prepared using inorganic templates

    SciTech Connect

    Winans, R.E.; Carrado, K.A.; Sandi, G.

    1997-07-01

    Unique carbons with demonstrated utility as anodes for lithium secondary batteries have been prepared by heating hydrocarbons within an inorganic template. Disordered carbons with novel and desirable molecular porosity were synthesized by the pyrolysis of pyrene at 700 C within a pillared clay. The clay was removed by treatment with acid, leaving behind carbons with 15 to 50 {angstrom} holes. These holey carbons, when converted into electrodes, allow rapid diffusion of the lithium into and out of a carbon. Favorable results have been obtained in several tests, for example, a reversible capacity of 825 mAh/g has been achieved, about four times greater than commercial batteries using convention pyrolytic carbon.

  1. Coastal-ocean uptake of anthropogenic carbon

    NASA Astrophysics Data System (ADS)

    Bourgeois, Timothée; Orr, James C.; Resplandy, Laure; Terhaar, Jens; Ethé, Christian; Gehlen, Marion; Bopp, Laurent

    2016-07-01

    Anthropogenic changes in atmosphere-ocean and atmosphere-land CO2 fluxes have been quantified extensively, but few studies have addressed the connection between land and ocean. In this transition zone, the coastal ocean, spatial and temporal data coverage is inadequate to assess its global budget. Thus we use a global ocean biogeochemical model to assess the coastal ocean's global inventory of anthropogenic CO2 and its spatial variability. We used an intermediate resolution, eddying version of the NEMO-PISCES model (ORCA05), varying from 20 to 50 km horizontally, i.e. coarse enough to allow multiple century-scale simulations but finer than coarse-resolution models (˜ 200 km) to better resolve coastal bathymetry and complex coastal currents. Here we define the coastal zone as the continental shelf area, excluding the proximal zone. Evaluation of the simulated air-sea fluxes of total CO2 for 45 coastal regions gave a correlation coefficient R of 0.8 when compared to observation-based estimates. Simulated global uptake of anthropogenic carbon results averaged 2.3 Pg C yr-1 during the years 1993-2012, consistent with previous estimates. Yet only 0.1 Pg C yr-1 of that is absorbed by the global coastal ocean. That represents 4.5 % of the anthropogenic carbon uptake of the global ocean, less than the 7.5 % proportion of coastal-to-global-ocean surface areas. Coastal uptake is weakened due to a bottleneck in offshore transport, which is inadequate to reduce the mean anthropogenic carbon concentration of coastal waters to the mean level found in the open-ocean mixed layer.

  2. Modeling carbon monoxide uptake during work

    SciTech Connect

    Bernard, T.E.; Duker, J.

    1981-05-01

    Acute carbon monoxide poisoning is the result of a diminished capacity of the blood to transport oxygen and sustain a level of metabolic activity. The diminished capacity is expressed in terms of the carboxyhemoglobin (COHb) level in the blood which is dependent upon the concentration of CO in the inhaled air. The rate of CO uptake or elimination is dependent upon the concentration of CO in the air as well as pulmonary diffusion capacity and alveolar ventilation which change with different metabolic rates. Coburn, Forster, and Kane (CFK) developed a mathematical model to describe the uptake and elimination kinetics of CO in sedentary individuals. The CFK model was used in a mathematical simulation of CO uptake and elimination where the independent variables were inhaled CO concentration and metabolic rate. The metabolic rate was used to specify pulmonary diffusing capacity and alveolar ventilation. As the level of COHb increased the metabolic rate was decreased to a level compatible with the impaired oxygen transport. A physical fatigue limit was also included. The theoretical model was used to simulate conditions beyond the range of exposures permissible under experimental laboratory conditions.

  3. Influence of Cd, Co, and Zn on inorganic carbon acquisition and carbon metabolism in Emiliania huxleyi.

    NASA Astrophysics Data System (ADS)

    Sutton, J. N.; Boye, M.; De La Broise, D.; Probert, I.

    2014-12-01

    Trace elements are essential micronutrients for primary producers; hence they influence the global carbon cycle and contribute to the regulation of Earth's climate. Over the past 25 years, the influence of Fe concentration on phytoplankton production has been well studied and this research has been instrumental in our understanding of the influence that biology has on the sequestration of atmospheric CO2. However, other trace elements that are directly involved in carbon metabolism by primary producers, such as Zn, Cd, and Co, have received less attention. We examined the physiological response of two strains of Emiliania huxleyi to a range of realistic trace element concentrations (Zn, Cd, Co) in the marine environment under batch, semi-continuous, and continuous culture conditions. In addition, the continuous culture system was maintained at a pH of 8.15 ±0.02 by a sensor and regulator-controlled CO2­ injection system. The results from this study will highlight the influence that trace element composition of seawater has on the growth rate, elemental quota, inorganic carbon uptake, and carbon metabolism of Emiliania huxleyi. Potential limitations for the interpretation of paleo-productivity records will be discussed.

  4. The influence of pH and media composition on the uptake of inorganic selenium by Chlamydomonas reinhardtii

    SciTech Connect

    Riedel, G.F.; Sanders, J.G.

    1996-09-01

    The uptake of inorganic selenium species, selenate and selenite, by the green alga Chlamydomonas reinhardtii Dang was examined as a function of pH over the range 5 to 9 and in media with varying concentrations of major ions and nutrients using {sup 75}Se as a radiotracer. Little difference was noted in the uptake of selenate as a function of pH, with the maximum uptake occurring at pH 8; however, selenite uptake increased substantially at the lower pH values. Selenate uptake was significantly decreased by higher sulfate concentrations and increased significantly by calcium, magnesium, and ammonium. Selenite uptake was significantly increased when the phosphate concentrations in the media were reduced. The results of these experiments demonstrate that varying water chemistry may significantly affect the uptake of inorganic selenium by phytoplankton and the subsequent transfer of the selenium to higher trophic levels.

  5. Inorganic carbon speciation and fluxes in the Congo River

    NASA Astrophysics Data System (ADS)

    Wang, Zhaohui Aleck; Bienvenu, Dinga Jean; Mann, Paul J.; Hoering, Katherine A.; Poulsen, John R.; Spencer, Robert G. M.; Holmes, Robert M.

    2013-02-01

    Seasonal variations in inorganic carbon chemistry and associated fluxes from the Congo River were investigated at Brazzaville-Kinshasa. Small seasonal variation in dissolved inorganic carbon (DIC) was found in contrast with discharge-correlated changes in pH, total alkalinity (TA), carbonate species, and dissolved organic carbon (DOC). DIC was almost always greater than TA due to the importance of CO2*, the sum of dissolved CO2 and carbonic acid, as a result of low pH. Organic acids in DOC contributed 11-61% of TA and had a strong titration effect on water pH and carbonate speciation. The CO2* and bicarbonate fluxes accounted for ~57% and 43% of the DIC flux, respectively. Congo River surface water released CO2 at a rate of ~109 mol m-2 yr-1. The basin-wide DIC yield was ~8.84 × 104 mol km-2 yr-1. The discharge normalized DIC flux to the ocean amounted to 3.11 × 1011 mol yr-1. The DOC titration effect on the inorganic carbon system may also be important on a global scale for regulating carbon fluxes in rivers.

  6. Contributing factors in foliar uptake of dissolved inorganic nitrogen at leaf level.

    PubMed

    Wuyts, Karen; Adriaenssens, Sandy; Staelens, Jeroen; Wuytack, Tatiana; Van Wittenberghe, Shari; Boeckx, Pascal; Samson, Roeland; Verheyen, Kris

    2015-02-01

    We investigated the influence of leaf traits, rainwater chemistry, and pedospheric nitrogen (N) fertilisation on the aqueous uptake of inorganic N by physiologically active tree leaves. Leaves of juvenile silver birch and European beech trees, supplied with NH₄NO₃ to the soil at rates from 0 to 200 kg N ha(-1)y(-1), were individually exposed to 100 μl of artificial rainwater containing (15)NH₄(+) or (15)NO₃(-) at two concentration levels for one hour. In the next vegetative period, the experiment was repeated with NH₄(+) at the highest concentration only. The N form and the N concentration in the applied rainwater and, to a lesser extent, the pedospheric N treatment and the leaf traits affected the aqueous foliar N uptake. The foliar uptake of NH₄(+) by birch increased when leaves were more wettable. High leaf N concentration and leaf mass per area enhanced the foliar N uptake, and NO₃(-) uptake in particular, by birch. Variation in the foliar N uptake by the beech trees could not be explained by the leaf traits considered. In the first experiment, N fertilisation stimulated the foliar N uptake in both species, which was on average 1.42-1.78 times higher at the highest soil N dose than at the zero dose. However, data variability was high and the effect was not appreciable in the second experiment. Our data suggest that next to rainwater chemistry (N form and concentration) also forest N status could play a role in the partitioning of N entering the ecosystem through the soil and the canopy. Models of canopy uptake of aqueous N at the leaf level should take account of leaf traits such as wettability and N concentration. PMID:25461099

  7. Light-driven Uptake of Oxygen, Carbon Dioxide, and Bicarbonate by the Green Alga Scenedesmus12

    PubMed Central

    Radmer, Richard; Ollinger, Otto

    1980-01-01

    Mass spectrometric techniques were used to study several aspects of the competition between O2 and species of inorganic carbon for photosynthetically generated reducing power in the green alga, Scenedesmus. In contrast to wild type, no appreciable light-driven O2 uptake was observed in a mutant lacking photosystem I. It is concluded that the carbon cycle-independent reduction of O2 occurs at the expense of photosystem I-generated reducing equivalents. The commonly observed differences between CO2-grown and air-grown Scenedesmus with respect to CO2 uptake and glycolate formation cannot be ascribed to differences in their capacity for light-driven O2 uptake. There were no intrinsic differences found in O2 uptake capacity between the two physiological types under conditions in which CO2 was saturating or CO2 uptake was inhibited. It was only under CO2-limited conditions that pronounced differences between the two physiological types were observed. This fact suggests that differences in O2 metabolism and sensitivity between the two types really reflect differences in their capacity to assimilate inorganic carbon; in this respect they are analogous to C3 and C4 plants. The hypothesis that air-grown Scenedesmus can assimilate HCO3− by directly monitoring the time course of dissolved CO2, O2 uptake, and O2 evolution in illuminated algal suspensions at alkaline pH was tested. Inasmuch as the measuring technique employed was fast compared to the nonenzymic equilibration of the inorganic carbon species, it was possible to determine the degree to which the CO2 concentration deviated from equilibrium (with the other inorganic carbon species) during the course of illumination. The observed kinetics in air-grown and CO2-grown algae in the presence and absence of carbonic anhydrase, and a comparison of these kinetics with theoretical (computer-generated) time courses, support the idea that air-adapted algae are able to assimilate HCO3− actively at a high rate. The data

  8. Carbon-13 variations in the dissolved inorganic carbon in estuarine waters

    NASA Astrophysics Data System (ADS)

    Sackett, William M.; Netratanawong, Toedsit; Holmes, M. Elizabeth

    The stable carbon isotope composition of dissolved inorganic carbon [DIC] was measured in Tampa Bay and Florida Bay. The dependence of isotopic composition was evaluated in terms of atmospheric CO2 exchange, carbon exchange between fresh water and seawater (i.e. salinity) and DIC derived from the reaction between calcium carbonate and organically derived CO2.The extent of organic carbon oxidation and the magnitude of organic carbon loading [pollution] in an estuary have implications for variations in the δ13C of DIC and its use as an indicator of the relative amounts of land and marine derived organic and inorganic carbon in paleogeographic studies.

  9. Carbon uptake by karsts in the Houzhai Basin, southwest China

    NASA Astrophysics Data System (ADS)

    Yan, Junhua; Wang, Y. P.; Zhou, Guoyi; Li, Shenggong; Yu, Guirui; Li, Kun

    2011-12-01

    Using an estimated bicarbonate concentration ([HCO3-]) in water and discharge rates of surface water and underground water from the Houzhai Basin, southwest China, from 1986 to 2007, we estimate that the mean carbon uptake rate was 20.7 g C m-2 yr-1. The surface water and underground water contribute about equally to the total carbon uptake from 1986 to 2007. About 97% of the interannual variation of annual carbon uptake can be explained by the discharge rate. Within a year, the net carbon uptake rate by karst during the wet season (May-October) was found to be about 2.4 times that during the dry season (November-April). If the seasonal variations of discharge rate and bicarbonate concentrations are not accounted for, estimates of annual net carbon uptake by karst can be biased by >25%, but that bias becomes very small (<5%) when averaged from 1986 to 2007 for the Houzhai Basin. We also found that one of the empirical models as used in global modeling overestimated the net carbon uptake by karst at Houzhai Basin by 29%. Carbon uptake from chemical weathering of all karsts in China is estimated to be about 12 Tg C yr-1 at present (1 Tg = 1012 g), or about 57% of the rate of net carbon accumulated in the forest biomass from 1981 to 1998 in China; we therefore recommend the inclusion of carbon uptake from chemical weathering in the regional carbon budget of China.

  10. Isotopic fractionation during the uptake and elimination of inorganic mercury by a marine fish.

    PubMed

    Xu, Xiaoyu; Wang, Wen-Xiong

    2015-11-01

    This study investigated the mass dependent (MDF) and independent fractionation (MIF) of stable mercury isotopes in fish during the uptake and elimination of inorganic species. Mercury accumulation during the exposure led to re-equilibration of organ isotopic compositions with the external sources, and elimination terminated the equilibrating with isotope ratios moving back to the original values. Generally, the isotopic behaviors corresponded to the changes of Hg accumulation in the muscle and liver, causing by the internal transportation, organ redistribution, and mixing of different sources. A small degree of MDF caused by biotransformation of Hg in the liver was documented during the elimination, whereas MIF was not observed. The absence of MIF during geochemical and metabolic processes suggested that mercury isotopes can be used as source tracers. Additionally, fish liver is a more responsive organ than muscle to track Hg source when it is mainly composed of inorganic species.

  11. Water uptake of multicomponent organic mixtures and their influence on hygroscopicity of inorganic salts.

    PubMed

    Wang, Yuanyuan; Jing, Bo; Guo, Yucong; Li, Junling; Tong, Shengrui; Zhang, Yunhong; Ge, Maofa

    2016-07-01

    The hygroscopic behaviors of atmospherically relevant multicomponent water soluble organic compounds (WSOCs) and their effects on ammonium sulfate (AS) and sodium chloride were investigated using a hygroscopicity tandem differential mobility analyzer (HTDMA) in the relative humidity (RH) range of 5%-90%. The measured hygroscopic growth was compared with predictions from the Extended-Aerosol Inorganics Model (E-AIM) and Zdanovskii-Stokes-Robinson (ZSR) method. The equal mass multicomponent WSOCs mixture containing levoglucosan, succinic acid, phthalic acid and humic acid showed gradual water uptake without obvious phase change over the whole RH range. It was found that the organic content played an important role in the water uptake of mixed particles. When organic content was dominant in the mixture (75%), the measured hygroscopic growth was higher than predictions from the E-AIM or ZSR relation, especially under high RH conditions. For mass fractions of organics not larger than 50%, the hygroscopic growth of mixtures was in good agreement with model predictions. The influence of interactions between inorganic and organic components on the hygroscopicity of mixed particles was related to the salt type and organic content. These results could contribute to understanding of the hygroscopic behaviors of multicomponent aerosol particles. PMID:27372129

  12. The inorganic carbon distribution in Irish coastal waters

    NASA Astrophysics Data System (ADS)

    McGrath, Triona; Cave, Rachel; McGovern, Evin; Kivimae, Caroline

    2014-05-01

    Despite their relatively small surface area, coastal and shelf waters play a crucial role in the global climate through their influence on major biogeochemical cycles. Due to growing concern about ocean acidification as a result of increasing atmospheric CO2 concentrations, measurements of inorganic carbon parameters (dissolved inorganic carbon (DIC), total alkalinity (TA), pH and pCO2) have been made with increasing regularity over the past two decades. While it is clear that open ocean surface waters are acidifying at a fairly uniform rate ( -0.02 pH units per decade), less is known about changes in coastal waters due to the high complexity and spatial variability in these regions. Large spatial and temporal variability in coastal CO2 parameters is mainly due to nutrient inputs, biological activity, upwelling and riverine inputs of alkalinity and inorganic and organic carbon. The inorganic carbon system in Irish coastal waters is presented here, gathered from 9 surveys around the Irish coastline between 2009 and 2013. There are striking contrasts in the CO2 system between different areas, largely attributed to the bedrock composition of the nearby rivers. Freshwater end-member concentrations of TA, calculated from TA-salinity relationships in outer estuarine and nearshore coastal water, were supported by riverine TA data from the Irish Environmental Protection Agency. A large portion of Ireland is covered with limestone bedrock and as a result, many of the rivers have extremely high TA (>5000μmol/kg) due to the carbonate mineral content of the underlying bedrock. While such high TA has resulted in elevated pH and calcium carbonate saturation states in some coastal waters, (e.g. Galway Bay and Dublin Bay), the high TA in other areas was accompanied by particularly high DIC (e.g. River Shannon on the west coast), resulting in lower pH and aragonite/calcite saturation states and even CO2 degassing in the Shannon estuary. Due to non-limestone lithology in many parts

  13. Sorptive uptake of selenium with magnetite and its supported materials onto activated carbon.

    PubMed

    Kwon, Jae H; Wilson, Lee D; Sammynaiken, R

    2015-11-01

    Kinetic and equilibrium uptake studies of selenite in aqueous solution with synthetic magnetite (Mag-P), commercial magnetite (Mag-C), goethite, activated carbon (AC), and a composite material containing 19% magnetite supported on activated carbon (CM-19) were investigated. Kinetic uptake studies used a one-pot setup at pH 5.26 at variable temperature. Sampling of unbound selenite in-situ was achieved with analytical detection by atomic absorbance. The sorptive uptake at equilibrium and kinetic conditions are listed in descending order: goethite>Mag-P>Mag-C>CM-19. Kinetic uptake parameters reveal that Mag-P showed apparent negative values for the activation energy (E(a)) and the enthalpy of activation (ΔH(‡)), in agreement with a multi-step process for the kinetic uptake of selenite. By contrast, Mag-C, CM-19, and goethite showed positive values for E(a) and ΔH(‡). The uptake properties of the various sorbent materials with selenite are in accordance with the formation of inner- and out-sphere complexes. Leaching of iron from the composite material (CM-19) was attenuated due to the stabilizing effect of the magnetite within the pore sites and the surface of AC. Supported iron oxide nanomaterial composites represent a unique sorbent material with tunable uptake properties toward inorganic selenite in aqueous solution.

  14. Uptake dynamics of inorganic mercury and methylmercury by the earthworm Pheretima guillemi.

    PubMed

    Dang, Fei; Zhao, Jie; Zhou, Dongmei

    2016-02-01

    Mercury uptake dynamics in the earthworm Pheretima guillemi, including the dissolved uptake rate constant (ku) from pore-water and assimilation efficiencies (AEs) from mercury-contaminated soil, was quantified in this study. Dissolved uptake rate constants were 0.087 and 0.553 L g(-1) d(-1) for inorganic mercury (IHg) and methylmercury (MeHg), respectively. Assimilation efficiency of IHg in field-contaminated soil was 7.2%, lower than 15.4% of spiked soil. In contrast, MeHg exhibited comparable AEs for both field-contaminated and spiked soil (82.4-87.2%). Within the framework of biodynamic model, we further modelled the exposure pathways (dissolved exposure vs soil ingestion) to source the accumulated mercury in Pheretima guillemi. The model showed that the relative importance of soil ingestion to mercury bioaccumulation depended largely on mercury partitioning coefficients (K(d)), and was also influenced by soil ingestion rate of earthworms. In the examined field-contaminated soil, almost (>99%) accumulated IHg and MeHg was predicted to derive from soil ingestion. Therefore, soil ingestion should be carefully considered when assessing mercury exposure risk to earthworms.

  15. Soil Inorganic Carbon in Deserts: Active Carbon Sink or Inert Reservoir?

    NASA Astrophysics Data System (ADS)

    Monger, H. C.; Cole, D. R.

    2011-12-01

    Soil inorganic carbon is the third largest C pool in the active global carbon cycle, containing at least 800 petagrams of carbon. Although carbonate dissolution-precipitation reactions have been understood for over a century, the role of soil inorganic carbon in carbon sequestration, and in particular pedogenic carbonate, is a deceptively complex process because it involves interdependent connections among climate, plants, microorganisms, silicate minerals, soil moisture, pH, and Ca supply via rain, dust, or in situ weathering. An understanding of soil inorganic carbon as a sink or reservoir also requires examination of the system at local to continental scales and at seasonal to millennial time scales. In desert soils studied in North America, carbon isotope ratios and radiocarbon dates were measured in combination with electron microscopy, lab and field experiments with biological calcite formation, and field measurements of carbon dioxide emissions. These investigations reveal that soil inorganic carbon is both an active sink and a inert reservoir depending on the spatial and temporal scale and source of calcium.

  16. Condensational uptake of semivolatile organic compounds in gasoline engine exhaust onto pre-existing inorganic particles

    NASA Astrophysics Data System (ADS)

    Li, S.-M.; Liggio, J.; Graham, L.; Lu, G.; Brook, J.; Stroud, C.; Zhang, J.; Makar, P.; Moran, M. D.

    2011-01-01

    This paper presents the results of laboratory studies on the condensational uptake of gaseous organic compounds in the exhaust of a light-duty gasoline engine onto preexisting sulfate and nitrate seed particles. Significant condensation of the gaseous organic compounds in the exhaust occurs onto pre-existing inorganic particles on a time scale of 2-5 min. The amount of condensed organic mass (COM) is proportional to the seed particle mass, suggesting that the uptake is due to dissolution, not adsorption. The solubility decreases as a power function with increased dilution of the exhaust, ranging from 0.23 g/g at a dilution ratio of 81, to 0.025 g/g at a dilution ratio of 2230. The solubility increases nonlinearly with increasing concentration of the total hydrocarbons in the gas phase (THC), rising from 0.12 g/g to 0.26 g/g for a CTHC increase of 1 to 18 μg m-3, suggesting that more organics are partitioned into the particles at higher gas phase concentrations. In terms of gas-particle partitioning, the condensational uptake of THC gases in gasoline engine exhaust can account for up to 30% of the total gas+particle THC. By incorporating the present findings, regional air quality modelling results suggest that the condensational uptake of THC onto sulfate particles alone can be comparable to the primary particle mass under moderately polluted ambient conditions. These findings are important for modelling and regulating the air quality impacts of gasoline vehicular emissions.

  17. Nitrogen and carbon uptake dynamics in Lake Superior

    NASA Astrophysics Data System (ADS)

    Kumar, Sanjeev; Sterner, Robert W.; Finlay, Jacques C.

    2008-12-01

    Despite a fivefold rise in nitrate concentration over the last century, many fundamental aspects of Lake Superior's N and C cycles are still very poorly understood. We present here the first measurements of inorganic N uptake and in situ C uptake rates in Lake Superior, one of the largest lakes in the world. A profile of C uptake suggests that more than 95% of production occurs in the top 30 m with highest productivity to biomass ratio in the epilimnion. High C uptake:N uptake and particulate C: N ratio compared to the Redfield ratio (6.6) in the epilimnion suggests higher turnover rate of C compared to N in epilimnetic particles. Experiments performed over a range of typical environmental conditions suggest a strong temperature dependence of N uptake with maximum rates observed during the warmest stratified period. Lakewide N uptake estimates derived from a temperature-based model suggest that on an annual basis, uptake is considerably higher than total N inputs from outside the lake. This difference indicates that the lake is recycling N rapidly, leading to a shorter turnover time in the water column than previously assumed. The long-term buildup of nitrate in the lake has been hypothesized to arise from limited assimilation of nitrate entering the lake. In contrast, our results suggest that nitrate accumulating in the lake is a result of internal N cycling, a finding consistent with recent studies based on a nitrogen budget and NO3- stable isotope analyses.

  18. Physiological and Molecular Aspects of the Inorganic Carbon-Concentrating Mechanism in Cyanobacteria 1

    PubMed Central

    Kaplan, Aaron; Schwarz, Rakefet; Lieman-Hurwitz, Judy; Reinhold, Leonora

    1991-01-01

    This paper reviews progress made in elucidating the inorganic carbon concentrating mechanism in cyanobacteria at the physiological and molecular levels. Emphasis is placed on the mechanism of inorganic carbon transport, physiological and genetical analysis of high-CO2-requiring mutants, the polypeptides induced during adaptation to low CO2, the functional significance of carboxysomes, and the role of carbonic anhydrase. We also make occasional reference to the green algal inorganic carbon-concentrating mechanism. PMID:16668522

  19. Evidence for an inorganic carbon-concentrating mechanism in the symbiotic dinoflagellate Symbiodinium sp.

    PubMed

    Leggat, W; Badger, M R; Yellowlees, D

    1999-12-01

    The presence of a carbon-concentrating mechanism in the symbiotic dinoflagellate Symbiodinium sp. was investigated. Its existence was postulated to explain how these algae fix inorganic carbon (C(i)) efficiently despite the presence of a form II Rubisco. When the dinoflagellates were isolated from their host, the giant clam (Tridacna gigas), CO(2) uptake was found to support the majority of net photosynthesis (45%-80%) at pH 8.0; however, 2 d after isolation this decreased to 5% to 65%, with HCO(3)(-) uptake supporting 35% to 95% of net photosynthesis. Measurements of intracellular C(i) concentrations showed that levels inside the cell were between two and seven times what would be expected from passive diffusion of C(i) into the cell. Symbiodinium also exhibits a distinct light-activated intracellular carbonic anhydrase activity. This, coupled with elevated intracellular C(i) and the ability to utilize both CO(2) and HCO(3)(-) from the medium, suggests that Symbiodinium sp. does possess a carbon-concentrating mechanism. However, intracellular C(i) levels are not as large as might be expected of an alga utilizing a form II Rubisco with a poor affinity for CO(2).

  20. Factors influencing anthropogenic carbon dioxide uptake in the North Atlantic in models of the ocean carbon cycle

    SciTech Connect

    Smith, R.S.; Marotzke, J.

    2008-09-30

    The uptake and storage of anthropogenic carbon in the North Atlantic is investigated using different configurations of ocean general circulation/carbon cycle models. We investigate how different representations of the ocean physics in the models, which represent the range of models currently in use, affect the evolution of CO{sub 2} uptake in the North Atlantic. The buffer effect of the ocean carbon system would be expected to reduce ocean CO{sub 2} uptake as the ocean absorbs increasing amounts of CO{sub 2}. We find that the strength of the buffer effect is very dependent on the model ocean state, as it affects both the magnitude and timing of the changes in uptake. The timescale over which uptake of CO{sub 2} in the North Atlantic drops to below preindustrial levels is particularly sensitive to the ocean state which sets the degree of buffering; it is less sensitive to the choice of atmospheric CO{sub 2} forcing scenario. Neglecting physical climate change effects, North Atlantic CO{sub 2} uptake drops below preindustrial levels between 50 and 300 years after stabilisation of atmospheric CO{sub 2} in different model configurations. Storage of anthropogenic carbon in the North Atlantic varies much less among the different model configurations, as differences in ocean transport of dissolved inorganic carbon and uptake of CO{sub 2} compensate each other. This supports the idea that measured inventories of anthropogenic carbon in the real ocean cannot be used to constrain the surface uptake. Including physical climate change effects reduces anthropogenic CO{sub 2} uptake and storage in the North Atlantic further, due to the combined effects of surface warming, increased freshwater input, and a slowdown of the meridional overturning circulation. The timescale over which North Atlantic CO{sub 2} uptake drops to below preindustrial levels is reduced by about one-third, leading to an estimate of this timescale for the real world of about 50 years after the stabilisation

  1. Bony fish and their contribution to marine inorganic carbon cycling

    NASA Astrophysics Data System (ADS)

    Salter, Michael; Perry, Chris; Wilson, Rod; Harborne, Alistair

    2016-04-01

    Conventional understanding of the marine inorganic carbon cycle holds that CaCO3 (mostly as low Mg-calcite and aragonite) precipitates in the upper reaches of the ocean and sinks to a point where it either dissolves or is deposited as sediment. Thus, it plays a key role controlling the distribution of DIC in the oceans and in regulating their capacity to absorb atmospheric CO2. However, several aspects of this cycle remain poorly understood and have long perplexed oceanographers, such as the positive alkalinity anomaly observed in the upper water column of many of the world's oceans, above the aragonite and calcite saturation horizons. This anomaly would be explained by extensive dissolution of a carbonate phase more soluble than low Mg-calcite or aragonite, but major sources for such phases remain elusive. Here we highlight marine bony fish as a potentially important primary source of this 'missing' high-solubility CaCO3. Precipitation of CaCO3 takes place within the intestines of all marine bony fish as part of their normal physiological functioning, and global production models suggest it could account for up to 45 % of total new marine CaCO3 production. Moreover, high Mg-calcite containing >25 % mol% MgCO3 - a more soluble phase than aragonite - is a major component of these precipitates. Thus, fish CaCO3 may at least partially explain the alkalinity anomaly in the upper water column. However, the issue is complicated by the fact that carbonate mineralogy actually varies among fish species, with high Mg-calcite (HMC), low Mg-calcite (LMC), aragonite, and amorphous calcium carbonate (ACC) all being common products. Using data from 22 Caribbean fish species, we have generated a novel production model that resolves phase proportions. We evaluate the preservation/dissolution potential of these phases and consider potential implications for marine inorganic carbon cycling. In addition, we consider the dramatic changes in fish biomass structure that have resulted

  2. Effects of inorganic and organic amendments on the uptake of lead and trace elements by Brassica chinensis grown in an acidic red soil.

    PubMed

    Tang, Xianjin; Li, Xia; Liu, Xingmei; Hashmi, Muhammad Z; Xu, Jianming; Brookes, Philip C

    2015-01-01

    A greenhouse study was conducted to investigate the effects of inorganic (phosphate rock, single superphosphate and calcium magnesium phosphate) and organic amendments (peat, straw manure and pig manure) on the uptake of lead (Pb) and trace elements by Chinese Cabbage (Brassica chinensis) grown in an acidic red soil. The application of all organic amendments increased the soil pH while inorganic amendments such as single superphosphate did not. Both inorganic and organic amendments decreased the availability and uptake of Pb while the organic amendments were superior to the inorganic (phosphate) amendments in reducing the availability of the more labile (soluble and exchangeable Pb) forms of soil Pb. More Pb was taken up by roots than shoots with all soil amendments. Among the organic amendments, straw manure and pig manure caused the largest decrease in Pb availability at 456.5 and 457.3 mg kg(-1), respectively, when a high level of 30 g organic amendments kg(-1) was applied. The organic amendments greatly increased the fraction D targeted to Fe-Mn oxides bound Pb, and decreased the fraction A (water-soluble), B (exchangeable), and C (carbonate-bound), thereby decreasing the solubility and mobility of Pb in soil. The organic amendments also significantly improved the concentrations of Fe, Mn, Cu and Zn in the soil and shoots (except Fe in shoots and/or roots), which are essential for plant nutrition. The organic amendments of straw and pig manure lowered the availability and uptake of Pb but not that of other trace metals. Thus, these amendments have the potential to remediate Pb-contaminated soils in situ. PMID:24992219

  3. Epitaxial relationships between calcium carbonate and inorganic substrates.

    PubMed

    Yang, Taewook; Jho, Jae Young; Kim, Il Won

    2014-09-15

    The polymorph-selective crystallization of calcium carbonate has been studied in terms of epitaxial relationship between the inorganic substrates and the aragonite/calcite polymorphs with implication in bioinspired mineralization. EpiCalc software was employed to assess the previously published experimental results on two different groups of inorganic substrates: aragonitic carbonate crystals (SrCO3, PbCO3, and BaCO3) and a hexagonal crystal family (α-Al2O3, α-SiO2, and LiNbO3). The maximum size of the overlayer (aragonite or calcite) was calculated for each substrate based on a threshold value of the dimensionless potential to estimate the relative nucleation preference of the polymorphs of calcium carbonate. The results were in good agreement with previous experimental observations, although stereochemical effects between the overlayer and substrate should be separately considered when existed. In assessing the polymorph-selective nucleation, the current method appeared to provide a better tool than the oversimplified mismatch parameters without invoking time-consuming molecular simulation.

  4. Condensational uptake of semivolatile organic compounds in gasoline engine exhaust onto pre-existing inorganic particles

    NASA Astrophysics Data System (ADS)

    Li, S.-M.; Liggio, J.; Graham, L.; Lu, G.; Brook, J.; Stroud, C.; Zhang, J.; Makar, P.; Moran, M. D.

    2011-10-01

    This paper presents the results of laboratory studies on the condensational uptake of gaseous organic compounds in the exhaust of a light-duty gasoline engine onto preexisting sulfate and nitrate seed particles. Significant condensation of the gaseous organic compounds in the exhaust occurs onto these inorganic particles on a time scale of 2-5 min. The amount of condensed organic mass (COM) is proportional to the seed particle mass, suggesting that the uptake is due to dissolution determined by the equilibrium partitioning between gas phase and particles, not adsorption. The amount of dissolution in unit seed mass, S, decreases as a power function with increased dilution of the exhaust, ranging from 0.23 g g-1 at a dilution ratio of 81, to 0.025 g g-1 at a dilution ratio of 2230. It increases nonlinearly with increasing concentration of the total hydrocarbons in the gas phase (THC), rising from 0.12 g g-1 to 0.26 g g-1 for a CTHC increase of 1 to 18 μg m-3, suggesting that more organics are partitioned into the particles at higher gas phase concentrations. In terms of gas-particle partitioning, the condensational uptake of THC gases in gasoline engine exhaust can account for up to 30% of the total gas + particle THC. The organic mass spectrum of COM has the largest fragment at m/z 44, with mass ratios of mass fragments 43/44 and 57/44 at 0.59 and 2.91, much lower than those reported for gasoline engine primary organic aerosols. The mass fragment 44/total organic mass ratio of 0.097 indicates that COM contains large oxygenated components. By incorporating the present findings, regional air quality modelling results suggest that the condensational uptake of THC onto sulfate particles alone can be comparable to the primary particle mass under moderately polluted ambient conditions. These findings are important for modelling and regulating the air quality impacts of gasoline vehicular emissions.

  5. Are we overestimating organic carbon concentrations in soils containing inorganic carbon?

    NASA Astrophysics Data System (ADS)

    Cunliffe, Andrew; Brazier, Richard; Vernon, Ian

    2014-05-01

    The concentration of carbon in soils is often measured via chromatographic analysis of elemental gases following dry combustion of a soil sample. This quantifies total carbon (TC), and, in soils which can be assumed to contain no inorganic carbon (IC), TC can be interpreted as organic carbon (OC). Soils containing IC are commonly subjected to an acid digestion to remove IC, prior to analysis for OC concentration; with IC being assigned as the difference between TC and OC. However, the removal of IC reduces the sample mass. Therefore, analysing acid-washed samples reveals the carbon concentration of the non-inorganic carbon sample mass, rather than the actual sample mass, as is generally assumed. This results in the overestimation of OC concentrations and consequent underestimation of IC concentrations, although TC concentrations are correct. The magnitude of the error is proportional to both IC concentration, and the ratio OC/IC, and consequently is greater in carbonate-rich samples. We present a revised protocol for accurately calculating OC and IC concentrations, using the carbon concentrations of the total sample and the acid-washed sample. The revised protocol is easily applicable to existing data, and corrects a known bias in apportioning carbon between organic and inorganic pools. Propagating the error through an example dataset from a semiarid environment, we find it can make a substantial (>10%) difference to estimated total OC pools. We recommend that this new protocol is used whenever elemental analysers are used to quantify OC concentrations in acid-washed sediments.

  6. Carbon balance in an irrigated corn field after inorganic fertilizer or manure application

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC an...

  7. Manure and inorganic fertilizer effects on carbon balance and losses in irrigated corn

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC an...

  8. Uptake Mechanism for Iodine Species to Black Carbon

    SciTech Connect

    Choung, Sungwook; Um, Wooyong; Kim, Min Kyung; Kim, Min-Gyu

    2013-08-13

    Natural organic matter (NOM) plays an important role in determining the fate and transport of iodine species such as iodide (I-) and iodate (IO3-) in groundwater system. Although NOM exists as diverse forms in environments, prior iodine studies have mainly focused on uptake processes of iodide and iodate to humic materials. This study was conducted to determine the iodide and iodate uptake potential for a particulate NOM (i.e., black carbon [BC]). A laboratory-produced BC and commercial humic acid were used for batch experiments to compare their iodine uptake properties. The BC exhibited >100 times greater uptake capability for iodide than iodate at low pH~3, while iodide uptake was negligible for the humic acid. The uptake properties of both solids strongly depend on the initial iodine aqueous concentrations. After uptake reaction of iodide to the BC, X-ray Absorption Fine Structure spectroscopy results indicated that the iodide was converted to electrophilic species, and iodine was covalently bound to carbon atom in polycyclic aromatic hydrocarbons present in the BC. The computed distribution coefficients (i.e., Kd values) suggest that the BC materials retard significantly the transport of iodide at low pH in environmental systems containing even a small amount of BC.

  9. Uptake mechanism for iodine species to black carbon.

    PubMed

    Choung, Sungwook; Um, Wooyong; Kim, Minkyung; Kim, Min-Gyu

    2013-09-17

    Natural organic matter (NOM) plays an important role in determining the fate and transport of iodine species such as iodide (I(-)) and iodate (IO3(-)) in groundwater system. Although NOM exists as diverse forms in environments, prior iodine studies have mainly focused on uptake processes of iodide and iodate to humic materials. This study was conducted to determine the iodide and iodate uptake potential for a particulate NOM (i.e., black carbon [BC]). A laboratory-produced BC and commercial humic acid were used for batch experiments to compare their iodine uptake properties. The BC exhibited >100 times greater uptake capability for iodide than iodate at low pH of ~3, while iodide uptake was negligible for the humic acid. The uptake properties of both solids strongly depend on the initial iodine aqueous concentrations. After uptake reaction of iodide to the BC, X-ray absorption fine structure spectroscopy results indicated that the iodide was converted to electrophilic species, and iodine was covalently bound to carbon atom in polycyclic aromatic hydrocarbons present in the BC. The computed distribution coefficients (i.e., Kd values) suggest that the BC materials retard significantly the transport of iodide at low pH in environmental systems containing even a small amount of BC.

  10. Soil Inorganic Carbon Formation: Can Parent Material Overcome Climate?

    NASA Astrophysics Data System (ADS)

    Stanbery, C.; Will, R. M.; Seyfried, M. S.; Benner, S. G.; Flores, A. N.; Guilinger, J.; Lohse, K. A.; Good, A.; Black, C.; Pierce, J. L.

    2014-12-01

    Soil carbon is the third largest carbon reservoir and is composed of both organic and inorganic constituents. However, the storage and flux of soil carbon within the global carbon cycle are not fully understood. While organic carbon is often the focus of research, the factors controlling the formation and dissolution of soil inorganic carbon (SIC) are complex. Climate is largely accepted as the primary control on SIC, but the effects of soil parent material are less clear. We hypothesize that effects of parent material are significant and that SIC accumulation will be greater in soils formed from basalts than granites due to the finer textured soils and more abundant calcium and magnesium cations. This research is being conducted in the Reynolds Creek Experimental Watershed (RCEW) in southwestern Idaho. The watershed is an ideal location because it has a range of gradients in precipitation (250 mm to 1200 mm), ecology (sagebrush steppe to juniper), and parent materials (a wide array of igneous and sedimentary rock types) over a relatively small area. Approximately 20 soil profiles will be excavated throughout the watershed and will capture the effects of differing precipitation amounts and parent material on soil characteristics. Several samples at each site will be collected for analysis of SIC content and grain size distribution using a pressure calcimeter and hydrometers, respectively. Initial field data suggests that soils formed over basalts have a higher concentration of SIC than those on granitic material. If precipitation is the only control on SIC, we would expect to see comparable amounts in soils formed on both rock types within the same precipitation zone. However, field observations suggest that for all but the driest sites, soils formed over granite had no SIC detected while basalt soils with comparable precipitation had measurable amounts of SIC. Grain size distribution appears to be a large control on SIC as the sandier, granitic soils promote

  11. Role of intracellular carbonic anhydrase in inorganic-carbon assimilation by Porphyridium purpureum.

    PubMed

    Dixon, G K; Patel, B N; Merrett, M J

    1987-12-01

    Air-grown cells of Porphyridium purpurem contain appreciable carbonic-anhydrase activity, comparable to that in air-grown Chlamydomonas reinhardtii, but activity is repressed in CO2-grown cells. Assay of carbonic-anhydrase activity in intact cells and cell extracts shows all activity to be intracellular in Porphyridium. Measurement of inorganic-carbon-dependent photosynthetic O2 evolution shows that sodium ions increase the affinity of Porphyridium cells for HCO 3 (-) . Acetazolamide and ethoxyzolamide were potent inhibitors of carbonic anhydrase in cell extracts but at pH 5.0 both acetazolamide and ethoxyzolamide had little effect upon the concentration of inorganic carbon required for the half-maximal rate of photosynthetic O2 evolution (K0.5[CO2]). At pH 8.0, where HCO 3 (-) is the predominant species of inorganic carbon, the K0.5 (CO2) was increased from 50 μM to 950 μM in the presence of ethoxyzolamide. It is concluded that in air-grown cells of Porphyridium. HCO 3 (-) is transported across the plasmalemma and intracellular carbonic anhydrase increases the steady-state flux of CO2 from inside the plasmalemma to ribulose-1,5-bisphosphate carboxylase-oxygenase by catalysing the interconversion of HCO 3 (-) and CO2 within the cell.

  12. Salicylhydroxamic acid (SHAM) inhibition of the dissolved inorganic carbon concentrating process in unicellular green algae

    SciTech Connect

    Goyal, A.; Tolbert, N.E. )

    1990-03-01

    Rates of photosynthetic O{sub 2} evolution, for measuring K{sub 0.5}(CO{sub 2} + HCO{sub 3}{sup {minus}}) at pH 7, upon addition of 50 micromolar HCO{sub 3}{sup {minus}} to air-adapted Chlamydomonas, Dunaliella, or Scenedesmus cells, were inhibited up to 90% by the addition of 1.5 to 4.0 millimolar salicylhydroxamic acid (SHAM) to the aqueous medium. The apparent K{sub i}(SHAM) for Chlamydomonas cells was about 2.5 millimolar, but due to low solubility in water effective concentrations would be lower. Salicylhydroxamic acid did not inhibit oxygen evolution or accumulation of bicarbonate by Scenedesmus cells between pH 8 to 11 or by isolated intact chloroplasts from Dunaliella. Thus, salicylhydroxamic acid appears to inhibit CO{sub 2} uptake, whereas previous results indicate that vanadate inhibits bicarbonate uptake. These conclusions were confirmed by three test procedures with three air-adapted algae at pH 7. Salicylhydroxamic acid inhibited the cellular accumulation of dissolved inorganic carbon, the rate of photosynthetic O{sub 2} evolution dependent on low levels of dissolved inorganic carbon (50 micromolar NaHCO{sub 3}), and the rate of {sup 14}CO{sub 2} fixation with 100 micromolar ({sup 14}C)HCO{sub 3}{sup {minus}}. Salicylhydroxamic acid inhibition of O{sub 2} evolution and {sup 14}CO{sub 2}-fixation was reversed by higher levels of NaHCO{sub 3}. Thus, salicylhydroxamic acid inhibition was apparently not affecting steps of photosynthesis other than CO{sub 2} accumulation. Although salicylhydroxamic acid is an inhibitor of alternative respiration in algae, it is not known whether the two processes are related.

  13. Salicylhydroxamic Acid (SHAM) Inhibition of the Dissolved Inorganic Carbon Concentrating Process in Unicellular Green Algae.

    PubMed

    Goyal, A; Tolbert, N E

    1990-03-01

    Rates of photosynthetic O(2) evolution, for measuring K(0.5)(CO(2) + HCO(3) (-)) at pH 7, upon addition of 50 micromolar HCO(3) (-) to air-adapted Chlamydomonas, Dunaliella, or Scenedesmus cells, were inhibited up to 90% by the addition of 1.5 to 4.0 millimolar salicylhydroxamic acid (SHAM) to the aqueous medium. The apparent K(1)(SHAM) for Chlamydomonas cells was about 2.5 millimolar, but due to low solubility in water effective concentrations would be lower. Salicylhydroxamic acid did not inhibit oxygen evolution or accumulation of bicarbonate by Scenedesmus cells between pH 8 to 11 or by isolated intact chloroplasts from Dunaliella. Thus, salicylhydroxamic acid appears to inhibit CO(2) uptake, whereas previous results indicate that vanadate inhibits bicarbonate uptake. These conclusions were confirmed by three test procedures with three air-adapted algae at pH 7. Salicylhydroxamic acid inhibited the cellular accumulation of dissolved inorganic carbon, the rate of photosynthetic O(2) evolution dependent on low levels of dissolved inorganic carbon (50 micromolar Na-HCO(3)), and the rate of (14)CO(2) fixation with 100 micromolar [(14)C] HCO(3) (-). Salicylhydroxamic acid inhibition of O(2) evolution and (14)CO(2)-fixation was reversed by higher levels of NaHCO(3). Thus, salicylhydroxamic acid inhibition was apparently not affecting steps of photosynthesis other than CO(2) accumulation. Although salicylhydroxamic acid is an inhibitor of alternative respiration in algae, it is not known whether the two processes are related.

  14. RAPID AND PRECISE METHOD FOR MEASURING STABLE CARBON ISOTOPE RATIOS OF DISSOLVED INORGANIC CARBON

    EPA Science Inventory

    We describe a method for rapid preparation, concentration and stable isotopic analysis of dissolved inorganic carbon (d13C-DIC). Liberation of CO2 was accomplished by placing 100 ?l phosphoric acid and 0.9 ml water in an evacuated 1.7-ml gas chromatography (GC) injection vial. Fo...

  15. The effects of combined application of inorganic Martian dust simulant and carbon dots on glutamate transport rat brain nerve terminals

    NASA Astrophysics Data System (ADS)

    Borisova, Tatiana; Krisanova, Natalia; Nazarova, Anastasiya; Borysov, Arseniy; Pastukhov, Artem; Pozdnyakova, Natalia; Dudarenko, Marina

    2016-07-01

    During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the central nervous system (Oberdorster et al., 2004). Recently, the research team of this study found the minor fractions of nanoparticles with the size ~ 50 -60 nm in Lunar and Martian dust stimulants (JSC-1a and JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin), whereas the average size of the simulants was 1 mm and 4mm, respectively (Krisanova et al., 2013). Also, the research team of this study discovered new phenomenon - the neuromodulating and neurotoxic effect of carbon nano-sized particles - Carbon dots (C-dots), originated from ash of burned carbon-containing product (Borisova et al, 2015). The aims of this study was to analyse acute effects of upgraded stimulant of inorganic Martian dust derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, carbon dots, on the key characteristic of synaptic neurotransmission. Acute administration of carbon-containing Martian dust analogue resulted in a significant decrease in transporter-mediated uptake of L-[14C]glutamate (the major excitatory neurotransmitter) by isolated rat brain nerve terminals. The ambient level of the neurotransmitter in the preparation of nerve terminals increased in the presence of carbon dot-contained Martian dust analogue. These effects were associated with action of carbon component of the upgraded Martian dust stimulant but not with its inorganic constituent.

  16. Absorption of inorganic halides produced from Freon 12 by calcium carbonate containing iron(III) oxide

    SciTech Connect

    Imamura, Seiichiro; Matsuba, Yoichi; Yamada, Etsu; Takai, Kenji; Utani, Kazunori

    1997-09-01

    Inorganic halides produced by the catalytic decomposition of Freon 12 were fixed by calcium carbonate, which is the main component of limestone. Iron(III) oxide, which is present as a contaminant in limestone, promoted the absorption of the halides by calcium carbonate at low temperatures. The supposed action of iron(III) oxide was to first react with inorganic halides, forming iron halides, and, then, transfer them to calcium carbonate to replace carbonate ion in a catalytic way. Thus, calcium carbonate containing iron oxides (limestone) can be used as an effective absorbent for the inorganic halogens produced during the decomposition of Freons.

  17. Corals concentrate dissolved inorganic carbon to facilitate calcification.

    PubMed

    Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; Tudhope, Alexander W

    2014-12-22

    The sources of dissolved inorganic carbon (DIC) used to produce scleractinian coral skeletons are not understood. Yet this knowledge is essential for understanding coral biomineralization and assessing the potential impacts of ocean acidification on coral reefs. Here we use skeletal boron geochemistry to reconstruct the DIC chemistry of the fluid used for coral calcification. We show that corals concentrate DIC at the calcification site substantially above seawater values and that bicarbonate contributes a significant amount of the DIC pool used to build the skeleton. Corals actively increase the pH of the calcification fluid, decreasing the proportion of DIC present as CO2 and creating a diffusion gradient favouring the transport of molecular CO2 from the overlying coral tissue into the calcification site. Coupling the increases in calcification fluid pH and [DIC] yields high calcification fluid [CO3(2-)] and induces high aragonite saturation states, favourable to the precipitation of the skeleton.

  18. Seafloor Weathering Dependence on Temperature and Dissolved Inorganic Carbon

    NASA Astrophysics Data System (ADS)

    Abbot, D. S.; Farahat, N. X.; Archer, D. E.

    2015-12-01

    Most thinking on Earth's carbon cycle implicates silicate weathering as the dominant control of atmospheric CO2 concentration over long timescales. Recent analyses of alteration of basalt at the seafloor, however, suggest that seafloor weathering (low-temperature (<60C) chemical alteration of the upper oceanic crust due to hydrothermal seawater circulation) increases dramatically in warm, high CO2 periods of Earth's history. This raises the possibility that seafloor weathering could complement silicate weathering in maintaining Earth's long term climate stability. Moreover, seafloor weathering would be the only type of weathering available on an exoplanet entirely covered by water, so understanding how it might work is essential for understanding the habitable zones of such waterworlds. We have built a 2D numerical model of the flow of seawater through porous basalt coupled to chemical alteration reactions that can calculate alkalinity fluxes and carbonate deposition (seafloor weathering). I will present simulations in which we vary the seawater temperature and dissolved inorganic carbon concentration, which are boundary conditions to our model, over large ranges. These results will provide a constraint on the ability of seafloor weathering to act as an effective climate buffer on Earth and other planets. I can't give you a preview of the results yet because at the time of writing this abstract we haven't completed the simulations!

  19. Spring Hydrology Determines Summer Net Carbon Uptake in Northern Ecosystems

    NASA Technical Reports Server (NTRS)

    Yi, Yonghong; Kimball, John; Reichle, Rolf H.

    2014-01-01

    Increased photosynthetic activity and enhanced seasonal CO2 exchange of northern ecosystems have been observed from a variety of sources including satellite vegetation indices (such as the Normalized Difference Vegetation Index; NDVI) and atmospheric CO2 measurements. Most of these changes have been attributed to strong warming trends in the northern high latitudes (greater than or equal to 50N). Here we analyze the interannual variation of summer net carbon uptake derived from atmospheric CO2 measurements and satellite NDVI in relation to surface meteorology from regional observational records. We find that increases in spring precipitation and snow pack promote summer net carbon uptake of northern ecosystems independent of air temperature effects. However, satellite NDVI measurements still show an overall benefit of summer photosynthetic activity from regional warming and limited impact of spring precipitation. This discrepancy is attributed to a similar response of photosynthesis and respiration to warming and thus reduced sensitivity of net ecosystem carbon uptake to temperature. Further analysis of boreal tower eddy covariance CO2 flux measurements indicates that summer net carbon uptake is positively correlated with early growing-season surface soil moisture, which is also strongly affected by spring precipitation and snow pack based on analysis of satellite soil moisture retrievals. This is attributed to strong regulation of spring hydrology on soil respiration in relatively wet boreal and arctic ecosystems. These results document the important role of spring hydrology in determining summer net carbon uptake and contrast with prevailing assumptions of dominant cold temperature limitations to high-latitude ecosystems. Our results indicate potentially stronger coupling of boreal/arctic water and carbon cycles with continued regional warming trends.

  20. An observing system simulation for Southern Ocean carbon dioxide uptake.

    PubMed

    Majkut, Joseph D; Carter, Brendan R; Frölicher, Thomas L; Dufour, Carolina O; Rodgers, Keith B; Sarmiento, Jorge L

    2014-07-13

    The Southern Ocean is critically important to the oceanic uptake of anthropogenic CO2. Up to half of the excess CO2 currently in the ocean entered through the Southern Ocean. That uptake helps to maintain the global carbon balance and buffers transient climate change from fossil fuel emissions. However, the future evolution of the uptake is uncertain, because our understanding of the dynamics that govern the Southern Ocean CO2 uptake is incomplete. Sparse observations and incomplete model formulations limit our ability to constrain the monthly and annual uptake, interannual variability and long-term trends. Float-based sampling of ocean biogeochemistry provides an opportunity for transforming our understanding of the Southern Ocean CO2 flux. In this work, we review current estimates of the CO2 uptake in the Southern Ocean and projections of its response to climate change. We then show, via an observational system simulation experiment, that float-based sampling provides a significant opportunity for measuring the mean fluxes and monitoring the mean uptake over decadal scales.

  1. Soil carbon dioxide partial pressure and dissolved inorganic carbonate chemistry under elevated carbon dioxide and ozone.

    PubMed

    Karberg, N J; Pregitzer, K S; King, J S; Friend, A L; Wood, J R

    2005-01-01

    Global emissions of atmospheric CO(2) and tropospheric O(3) are rising and expected to impact large areas of the Earth's forests. While CO(2) stimulates net primary production, O(3) reduces photosynthesis, altering plant C allocation and reducing ecosystem C storage. The effects of multiple air pollutants can alter belowground C allocation, leading to changes in the partial pressure of CO(2) (pCO(2)) in the soil , chemistry of dissolved inorganic carbonate (DIC) and the rate of mineral weathering. As this system represents a linkage between the long- and short-term C cycles and sequestration of atmospheric CO(2), changes in atmospheric chemistry that affect net primary production may alter the fate of C in these ecosystems. To date, little is known about the combined effects of elevated CO(2) and O(3) on the inorganic C cycle in forest systems. Free air CO(2) and O(3) enrichment (FACE) technology was used at the Aspen FACE project in Rhinelander, Wisconsin to understand how elevated atmospheric CO(2) and O(3) interact to alter pCO(2) and DIC concentrations in the soil. Ambient and elevated CO(2) levels were 360+/-16 and 542+/-81 microl l(-1), respectively; ambient and elevated O(3) levels were 33+/-14 and 49+/-24 nl l(-1), respectively. Measured concentrations of soil CO(2) and calculated concentrations of DIC increased over the growing season by 14 and 22%, respectively, under elevated atmospheric CO(2) and were unaffected by elevated tropospheric O(3). The increased concentration of DIC altered inorganic carbonate chemistry by increasing system total alkalinity by 210%, likely due to enhanced chemical weathering. The study also demonstrated the close coupling between the seasonal delta(13)C of soil pCO(2) and DIC, as a mixing model showed that new atmospheric CO(2) accounted for approximately 90% of the C leaving the system as DIC. This study illustrates the potential of using stable isotopic techniques and FACE technology to examine long- and short

  2. Adhesion of preceramic inorganic polymer coatings to carbon fibers

    SciTech Connect

    Chaudhry, T.M.; Drzal, L.T.; Ho, H.; Laine, R.

    1996-12-31

    To determine whether the preceramic inorganic polymer coating can provide not only the thermal oxidative protection during both processing and use in metal matrix composites or ceramic matrix composites but also the appropriate composite properties, it is desirable to know how and at what point in the thermal processing cycle the coating-carbon fiber interface undergoes changes that affect the interfacial adhesion and failure mode. Also, it is important to identify the locus of interfacial failure i.e. between fiber and coating or between coating and matrix. This work is directed at determining the interfacial changes and the locus of failure in order to optimize both the coating chemistry and the conversion process. The characteristics of the benchmark interface coating material, silicon oxycarbide, SiO{sub x}C{sub y} or black glass have been studied. SiO{sub x}C{sub y} was chosen because (1) SiO{sub x}C{sub y} is amorphous, (2) it is possible to prepare very well-defined materials, where the chemistry and the evolution of the material with time and temperature are known in detail, and (3) SiO{sub x}C{sub y} is a matrix material used in commercial composites. It has been shown that these coatings are effective in increasing the oxidation resistance of the carbon fibers themselves.

  3. Lithium storage on carbon nitride, graphenylene and inorganic graphenylene.

    PubMed

    Hankel, Marlies; Searles, Debra J

    2016-06-01

    We present results of density functional theory calculations on the lithium (Li) ion storage capacity of three different two dimensional porous graphene-like membranes. The graphitic carbon nitride membrane, g-CN, is found to have a large Li storage capacity of at least 813 mA h g(-1) (LiCN). However, it is also found that the Li interacts very strongly with the membrane indicating that this is most likely irreversible. According to the calculations, graphenylene or biphenylene carbon (BPC) has a storage capacity of 487 mA h g(-1) (Li1.5C6) which is higher than that for graphite. We also find that Li is very mobile on these materials and does not interact as strongly with the membrane making it a more suitable anode material. Inorganic graphenylene, which is a boron nitride analog of graphenylene, shows very low binding energies, much lower than the cohesive energy of lithium, and it appears to be unsuitable as an anode material for lithium ion batteries. We discuss how charge transfer leads to the very different behaviour observed in these three similar materials.

  4. Sustainable carbon uptake - important ecosystem service within sustainable forest management

    NASA Astrophysics Data System (ADS)

    Zorana Ostrogović Sever, Maša; Anić, Mislav; Paladinić, Elvis; Alberti, Giorgio; Marjanović, Hrvoje

    2016-04-01

    Even-aged forest management with natural regeneration under continuous cover (i.e. close to nature management) is considered to be sustainable regarding the yield, biodiversity and stability of forest ecosystems. Recently, in the context of climate change, there is a raising question of sustainable forest management regarding carbon uptake. Aim of this research was to explore whether current close to nature forest management approach in Croatia can be considered sustainable in terms of carbon uptake throughout the life-time of Pedunculate oak forest. In state-owned managed forest a chronosequence experiment was set up and carbon stocks in main ecosystem pools (live biomass, dead wood, litter and mineral soil layer), main carbon fluxes (net primary production, soil respiration (SR), decomposition) and net ecosystem productivity were estimated in eight stands of different age (5, 13, 38, 53, 68, 108, 138 and 168 years) based on field measurements and published data. Air and soil temperature and soil moisture were recorded on 7 automatic mini-meteorological stations and weekly SR measurements were used to parameterize SR model. Carbon balance was estimated at weekly scale for the growing season 2011 (there was no harvesting), as well as throughout the normal rotation period of 140 years (harvesting was included). Carbon stocks in different ecosystem pools change during a stand development. Carbon stocks in forest floor increase with stand age, while carbon stocks in dead wood are highest in young and older stands, and lowest in middle-aged, mature stands. Carbon stocks in mineral soil layer were found to be stable across chronosequence with no statistically significant age-dependent trend. Pedunculate Oak stand, assuming successful regeneration, becomes carbon sink very early in a development phase, between the age of 5 and 13 years, and remains carbon sink even after the age of 160 years. Greatest carbon sink was reached in the stand aged 53 years. Obtained results

  5. Profile storage of organic/inorganic carbon in soil: from forest to desert.

    PubMed

    Wang, Yugang; Li, Yan; Ye, Xuehua; Chu, Yu; Wang, Xinping

    2010-03-15

    Understanding the distribution of organic/inorganic carbon storage in soil profile is crucial for assessing regional, continental and global soil C stores and predicting the consequences of global change. However, little is known about the organic/inorganic carbon storages in deep soil layers at various landscapes. This study was conducted to determine the soil organic/inorganic carbon storage in soil profile of 0-3m at 5 sites of natural landscape from forest to desert. Landscapes are temperate forest, temperate grassland, temperate shrub-grassland, temperate shrub desert, and temperate desert. Root mass density and carbon contents at the profile were determined for each site. The results showed that considerable decrease in root biomass and soil organic carbon content at the soil profile of 0-3m when landscape varied from forest to desert along a precipitation gradient, while soil inorganic carbon content increased significantly along the precipitation gradient. Namely, for density of soil organic carbon: forest>grassland>shrub-grassland>shrub desert>desert; for density of soil inorganic carbon: forest, grasslandcarbon storage was found in 1-3m depth. For grassland and shrub-grassland, the contribution from 1-3m was mainly in the form of organic carbon, while for shrub desert and desert the contribution from this depth was mainly in the form of inorganic carbon. The comparison of soil C storage between top 0-1m and 1-3m showed that the using top 1m of soil profile to estimate soil carbon storages would considerably underestimate soil carbon storage. This is especially true for organic soil carbon at grassland region, and for soil inorganic carbon at desert region.

  6. Strongly coupled inorganic-nano-carbon hybrid materials for energy storage.

    PubMed

    Wang, Hailiang; Dai, Hongjie

    2013-04-01

    The global shift of energy production from fossil fuels to renewable energy sources requires more efficient and reliable electrochemical energy storage devices. In particular, the development of electric or hydrogen powered vehicles calls for much-higher-performance batteries, supercapacitors and fuel cells than are currently available. In this review, we present an approach to synthesize electrochemical energy storage materials to form strongly coupled hybrids (SC-hybrids) of inorganic nanomaterials and novel graphitic nano-carbon materials such as carbon nanotubes and graphene, through nucleation and growth of nanoparticles at the functional groups of oxidized graphitic nano-carbon. We show that the inorganic-nano-carbon hybrid materials represent a new approach to synthesize electrode materials with higher electrochemical performance than traditional counterparts made by simple physical mixtures of electrochemically active inorganic particles and conducting carbon materials. The inorganic-nano-carbon hybrid materials are novel due to possible chemical bonding between inorganic nanoparticles and oxidized carbon, affording enhanced charge transport and increased rate capability of electrochemical materials without sacrificing specific capacity. Nano-carbon with various degrees of oxidation provides a novel substrate for nanoparticle nucleation and growth. The interactions between inorganic precursors and oxidized-carbon substrates provide a degree of control over the morphology, size and structure of the resulting inorganic nanoparticles. This paper reviews the recent development of inorganic-nano-carbon hybrid materials for electrochemical energy storage and conversion, including the preparation and functionalization of graphene sheets and carbon nanotubes to impart oxygen containing groups and defects, and methods of synthesis of nanoparticles of various morphologies on oxidized graphene and carbon nanotubes. We then review the applications of the SC

  7. Inorganic carbon fluxes across the vadose zone of planted and unplanted soil mesocosms

    NASA Astrophysics Data System (ADS)

    Thaysen, E. M.; Jacques, D.; Jessen, S.; Andersen, C. E.; Laloy, E.; Ambus, P.; Postma, D.; Jakobsen, I.

    2014-12-01

    The efflux of carbon dioxide (CO2) from soils influences atmospheric CO2 concentrations and thereby climate change. The partitioning of inorganic carbon (C) fluxes in the vadose zone between emission to the atmosphere and to the groundwater was investigated to reveal controlling underlying mechanisms. Carbon dioxide partial pressure in the soil gas (pCO2), alkalinity, soil moisture and temperature were measured over depth and time in unplanted and planted (barley) mesocosms. The dissolved inorganic carbon (DIC) percolation flux was calculated from the pCO2, alkalinity and the water flux at the mesocosm bottom. Carbon dioxide exchange between the soil surface and the atmosphere was measured at regular intervals. The soil diffusivity was determined from soil radon-222 (222Rn) emanation rates and soil air Rn concentration profiles and was used in conjunction with measured pCO2 gradients to calculate the soil CO2 production. Carbon dioxide fluxes were modeled using the HP1 module of the Hydrus 1-D software. The average CO2 effluxes to the atmosphere from unplanted and planted mesocosm ecosystems during 78 days of experiment were 0.1 ± 0.07 and 4.9 ± 0.07 μmol C m-2 s-1, respectively, and grossly exceeded the corresponding DIC percolation fluxes of 0.01 ± 0.004 and 0.06 ± 0.03 μmol C m-2 s-1. Plant biomass was high in the mesocosms as compared to a standard field situation. Post-harvest soil respiration (Rs) was only 10% of the Rs during plant growth, while the post-harvest DIC percolation flux was more than one-third of the flux during growth. The Rs was controlled by production and diffusivity of CO2 in the soil. The DIC percolation flux was largely controlled by the pCO2 and the drainage flux due to low solution pH. Modeling suggested that increasing soil alkalinity during plant growth was due to nutrient buffering during root nitrate uptake.

  8. Bioengineering aspects of inorganic carbon supply to mass algal cultures. Final report

    SciTech Connect

    Goldman, J.C.

    1980-06-01

    The work included in this report is part of an ongoing study (currently funded by the Solar Energy Research Institute - Subcontract No. XR-9-8144-1) on the inorganic carbon requirements of microalgae under mass culture conditions and covers the period June 1, 1978 through May 31, 1979. It is divided into two parts appended herein. The first part is a literature review on the inorganic carbon chemical system in relation to algal growth requirements, and the second part deals with the kinetics of inorganic carbon-limited growth of two freshwater chlorophytes including the effect of carbon limitation on cellular chemical composition. Additional experiment research covered under this contract was reported in the Proceedings of the 3rd Annual Biomass Energy Systems Conferences, pp. 25-32, Bioengineering aspects of inorganic carbon supply to mass algal cultures. Report No. SERI/TP-33-285.

  9. External carbonic anhydrase in three Caribbean corals: quantification of activity and role in CO2 uptake

    NASA Astrophysics Data System (ADS)

    Tansik, Anna L.; Fitt, William K.; Hopkinson, Brian M.

    2015-09-01

    Scleractinian corals have complicated inorganic carbon ( C i) transport pathways to support both photosynthesis, by their symbiotic dinoflagellates, and calcification. The first step in C i acquisition, uptake into the coral, is critical as the diffusive boundary layer limits the supply of CO2 to the surface and HCO3 - uptake is energy intensive. An external carbonic anhydrase (eCA) on the oral surface of corals is thought to facilitate CO2 uptake by converting HCO3 - into CO2, helping to overcome the limitation imposed by the boundary layer. However, this enzyme has not yet been identified or detected in corals, nor has its activity been quantified. We have developed a method to quantify eCA activity using a reaction-diffusion model to analyze data on 18O removal from labeled C i. Applying this technique to three species of Caribbean corals ( Orbicella faveolata, Porites astreoides, and Siderastrea radians) showed that all species have eCA and that the potential rates of CO2 generation by eCA greatly exceed photosynthetic rates. This demonstrates that eCA activity is sufficient to support its hypothesized role in CO2 supply. Inhibition of eCA severely reduces net photosynthesis in all species (on average by 46 ± 27 %), implying that CO2 generated by eCA is a major carbon source for photosynthesis. Because of the high permeability of membranes to CO2, CO2 uptake is likely driven by a concentration gradient across the cytoplasmic membrane. The ubiquity of eCA in corals from diverse genera and environments suggests that it is fundamental for photosynthetic CO2 supply.

  10. On the reactive adsorption of ammonia on activated carbons modified by impregnation with inorganic compounds.

    PubMed

    Bandosz, Teresa J; Petit, Camille

    2009-10-15

    Ammonia adsorption was studied under dynamic conditions, at room temperature, on activated carbons of different origins (coal-based, wood-based and coconut-shell-based carbons) before and after their impregnation with various inorganic compounds including metal chlorides, metal oxides and polycations. The role of humidity was evaluated by running tests in both dry and moist conditions. Adsorbents were analyzed before and after exposure to ammonia by thermal analyses, sorption of nitrogen, potentiometric titration, X-ray diffraction and FTIR spectroscopy. Results of breakthrough tests show significant differences in terms of adsorption capacity depending on the parent carbon, the impregnates and the experimental conditions. It is found that surface chemistry governs ammonia adsorption on the impregnated carbons. More precisely, it was demonstrated that a proper combination of the surface pH, the strength, type and amount of functional groups present on the adsorbents' surface is a key point in ammonia uptake. Water can have either positive or negative effects on the performance of adsorbents. It can enhance NH(3) adsorption capacity since it favors ammonia dissolution and thus enables reaction between ammonium ions and carboxylic groups from the carbons' surface. On the other hand, water can also reduce the performance from the strength of adsorption standpoint. It promotes dissolution of ammonia and that ammonia is first removed from the system when the adsorbent bed is purged with air. Ammonia, besides adsorption by van der Waals forces and dissolution in water, is also retained on the surface via reactive mechanisms such as acid-base reactions (Brønsted and Lewis) or complexation. Depending on the materials used and the experimental conditions, 6-47% ammonia adsorbed is strongly retained on the surface even when the bed is purged with air. PMID:19615690

  11. On the reactive adsorption of ammonia on activated carbons modified by impregnation with inorganic compounds

    SciTech Connect

    Bandosz, T.J.; Petit, C.

    2009-10-15

    Ammonia adsorption was studied under dynamic conditions, at room temperature, on activated carbons of different origins (coal-based, wood-based and coconut-shell-based carbons) before and after their impregnation with various inorganic compounds including metal chlorides, metal oxides and polycations. The role of humidity was evaluated by running tests in both dry and moist conditions. Adsorbents were analyzed before and after exposure to ammonia by thermal analyses, sorption of nitrogen, potentiometric titration, X-ray diffraction and FTIR spectroscopy. Results of breakthrough tests show significant differences in terms of adsorption capacity depending on the parent carbon, the impregnates and the experimental conditions. It is found that surface chemistry governs ammonia adsorption on the impregnated carbons. More precisely, it was demonstrated that a proper combination of the surface pH, the strength, type and amount of functional groups present on the adsorbents' surface is a key point in ammonia uptake. Water can have either positive or negative effects on the performance of adsorbents. It can enhance NH{sub 3} adsorption capacity since it favors ammonia dissolution and thus enables reaction between ammonium ions and carboxylic groups from the carbons' surface. On the other hand, water can also reduce the performance from the strength of adsorption standpoint. It promotes dissolution of ammonia and that ammonia is first removed from the system when the adsorbent bed is purged with air. Ammonia, besides adsorption by van der Waals forces and dissolution in water, is also retained on the surface via reactive mechanisms such as acid-base reactions (Bronsted and Lewis) or complexation. Depending on the materials used and the experimental conditions, 6-47% ammonia adsorbed is strongly retained on the surface even when the bed is purged with air.

  12. Impact of anthropogenic atmospheric nitrogen and sulfur deposition on ocean acidification and the inorganic carbon system.

    PubMed

    Doney, Scott C; Mahowald, Natalie; Lima, Ivan; Feely, Richard A; Mackenzie, Fred T; Lamarque, Jean-Francois; Rasch, Phil J

    2007-09-11

    Fossil fuel combustion and agriculture result in atmospheric deposition of 0.8 Tmol/yr reactive sulfur and 2.7 Tmol/yr nitrogen to the coastal and open ocean near major source regions in North America, Europe, and South and East Asia. Atmospheric inputs of dissociation products of strong acids (HNO(3) and H2SO(4)) and bases (NH(3)) alter surface seawater alkalinity, pH, and inorganic carbon storage. We quantify the biogeochemical impacts by using atmosphere and ocean models. The direct acid/base flux to the ocean is predominately acidic (reducing total alkalinity) in the temperate Northern Hemisphere and alkaline in the tropics because of ammonia inputs. However, because most of the excess ammonia is nitrified to nitrate (NO(3)(-)) in the upper ocean, the effective net atmospheric input is acidic almost everywhere. The decrease in surface alkalinity drives a net air-sea efflux of CO(2), reducing surface dissolved inorganic carbon (DIC); the alkalinity and DIC changes mostly offset each other, and the decline in surface pH is small. Additional impacts arise from nitrogen fertilization, leading to elevated primary production and biological DIC drawdown that reverses in some places the sign of the surface pH and air-sea CO(2) flux perturbations. On a global scale, the alterations in surface water chemistry from anthropogenic nitrogen and sulfur deposition are a few percent of the acidification and DIC increases due to the oceanic uptake of anthropogenic CO(2). However, the impacts are more substantial in coastal waters, where the ecosystem responses to ocean acidification could have the most severe implications for mankind. PMID:17804807

  13. Impact of anthropogenic atmospheric nitrogen and sulfur deposition on ocean acidification and the inorganic carbon system.

    PubMed

    Doney, Scott C; Mahowald, Natalie; Lima, Ivan; Feely, Richard A; Mackenzie, Fred T; Lamarque, Jean-Francois; Rasch, Phil J

    2007-09-11

    Fossil fuel combustion and agriculture result in atmospheric deposition of 0.8 Tmol/yr reactive sulfur and 2.7 Tmol/yr nitrogen to the coastal and open ocean near major source regions in North America, Europe, and South and East Asia. Atmospheric inputs of dissociation products of strong acids (HNO(3) and H2SO(4)) and bases (NH(3)) alter surface seawater alkalinity, pH, and inorganic carbon storage. We quantify the biogeochemical impacts by using atmosphere and ocean models. The direct acid/base flux to the ocean is predominately acidic (reducing total alkalinity) in the temperate Northern Hemisphere and alkaline in the tropics because of ammonia inputs. However, because most of the excess ammonia is nitrified to nitrate (NO(3)(-)) in the upper ocean, the effective net atmospheric input is acidic almost everywhere. The decrease in surface alkalinity drives a net air-sea efflux of CO(2), reducing surface dissolved inorganic carbon (DIC); the alkalinity and DIC changes mostly offset each other, and the decline in surface pH is small. Additional impacts arise from nitrogen fertilization, leading to elevated primary production and biological DIC drawdown that reverses in some places the sign of the surface pH and air-sea CO(2) flux perturbations. On a global scale, the alterations in surface water chemistry from anthropogenic nitrogen and sulfur deposition are a few percent of the acidification and DIC increases due to the oceanic uptake of anthropogenic CO(2). However, the impacts are more substantial in coastal waters, where the ecosystem responses to ocean acidification could have the most severe implications for mankind.

  14. Comparative studies of inorganic carbon utilization in Emiliania huxleyi and some non-calcifying marine microalgae

    NASA Astrophysics Data System (ADS)

    Liang-Feng, Dong; Merrett, M. J.; Chao-Yuan, Wu

    1999-09-01

    Inorganic carbon utilization in the non-calcifying marine microalgae, Nannochloropsis oculata, Phaeodactylum tricornutum and Porphyridium purpureum was compared with high- and low-calcifying strains of Emiliania huxleyi grown in artificial seawater medium aerated with either air (0.03% V/V CO2) or CO2-free air. For high-calcifying strain of E. oculata and P. tricornutem, similar growth patterns were observed in air-and CO2-free air-grown cultures. P. purpureum showed a less final cell density in CO2-free air than in air-grown culture. However, low-calcifying strain of E. huxleyi was able to grow only in air-grown culture, but not in CO2-free air-grown culture. Measurements of alkalinity, pH, concentration of dissolved inorganic carbon (DIC) and free CO2 showed different patterns of DIC utilization. With N. oculata, P. tricornutum and P. purpureum the pattern of DIC utilization was characterized by an increase of pH and a decrease of DIC but a constant alkalinity in the cultures aerated with air or CO2-free air, suggesting that bicarbonate utilization was concomitant with an efflux of OH-. Both alkalinity and pH were maintained rather constant in air-grown culture of low-calcifying strain of E. huxleyi, suggesting that diffusive entry of CO2 could meet the requirement of DIC for its photosynthesis and growth. High-calcifying strain of E. huxleyi, however, showed a pattern of decrease of alkalinity and DIC but an almost constant pH, indicating that bicarbonate was the major form of inorganic carbon utilised by this organism and bicarbonate uptake is unlikely to be accompanied by an efflux of OH-. The final pH values reached by N. oculata, P. tricornutum and P. purpureum in a closed system were 10.75, 10.60 and 9.85 respectively, showing that bicarbonate utilisation is concomitant with an efflux of OH-. While the final pH of 8.4 in high-calcifying E. huxleyi suggests that bicarbonate utilization was not accompanied by an efflux of OH-.

  15. Inorganic carbon acquisition in potentially toxic and non-toxic diatoms: the effect of pH-induced changes in seawater carbonate chemistry.

    PubMed

    Trimborn, Scarlett; Lundholm, Nina; Thoms, Silke; Richter, Klaus-Uwe; Krock, Bernd; Hansen, Per Juel; Rost, Björn

    2008-05-01

    The effects of pH-induced changes in seawater carbonate chemistry on inorganic carbon (C(i)) acquisition and domoic acid (DA) production were studied in two potentially toxic diatom species, Pseudo-nitzschia multiseries and Nitzschia navis-varingica, and the non-toxic Stellarima stellaris. In vivo activities of carbonic anhydrase (CA), photosynthetic O(2) evolution and CO(2) and HCO(3)(-) uptake rates were measured by membrane inlet MS in cells acclimated to low (7.9) and high pH (8.4 or 8.9). Species-specific differences in the mode of carbon acquisition were found. While extracellular carbonic anhydrase (eCA) activities increased with pH in P. multiseries and S. stellaris, N. navis-varingica exhibited low eCA activities independent of pH. Half-saturation concentrations (K(1/2)) for photosynthetic O(2) evolution, which were highest in S. stellaris and lowest in P. multiseries, generally decreased with increasing pH. In terms of carbon source, all species took up both CO(2) and HCO(3)(-). K(1/2) values for inorganic carbon uptake decreased with increasing pH in two species, while in N. navis-varingica apparent affinities did not change. While the contribution of HCO(3)(-) to net fixation was more than 85% in S. stellaris, it was about 55% in P. multiseries and only approximately 30% in N. navis-varingica. The intracellular content of DA increased in P. multiseries and N. navis-varingica with increasing pH. Based on our data, we propose a novel role for eCA acting as C(i)-recycling mechanism. With regard to pH-dependence of growth, the 'HCO(3)(-) user' S. stellaris was as sensitive as the 'CO(2) user' N. navis-varingica. The suggested relationship between DA and carbon acquisition/C(i) limitation could not be confirmed. PMID:18405335

  16. Methodologies for extraction of dissolved inorganic carbon for stable carbon isotope studies : evaluation and alternatives

    USGS Publications Warehouse

    Hassan, Afifa Afifi

    1982-01-01

    The gas evolution and the strontium carbonate precipitation techniques to extract dissolved inorganic carbon (DIC) for stable carbon isotope analysis were investigated. Theoretical considerations, involving thermodynamic calculations and computer simulation pointed out several possible sources of error in delta carbon-13 measurements of the DIC and demonstrated the need for experimental evaluation of the magnitude of the error. An alternative analytical technique, equilibration with out-gassed vapor phase, is proposed. The experimental studies revealed that delta carbon-13 of the DIC extracted from a 0.01 molar NaHC03 solution by both techniques agreed within 0.1 per mil with the delta carbon-13 of the DIC extracted by the precipitation technique, and an increase of only 0.27 per mil in that extracted by the gas evolution technique. The efficiency of extraction of DIC decreased with sulfate concentration in the precipitation technique but was independent of sulfate concentration in the gas evolution technique. Both the precipitation and gas evolution technique were found to be satisfactory for extraction of DIC from different kinds of natural water for stable carbon isotope analysis, provided appropriate precautions are observed in handling the samples. For example, it was found that diffusion of atmospheric carbon dioxide does alter the delta carbon-13 of the samples contained in polyethylene bottles; filtration and drying in the air change the delta carbon-13 of the samples contained in polyethylene bottles; filtration and drying in the air change the delta carbon-13 of the precipitation technique; hot manganese dioxide purification changes the delta carbon-13 of carbon dioxide. (USGS)

  17. Effects of upwelling, tides and biological processes on the inorganic carbon system of a coastal lagoon in Baja California

    NASA Astrophysics Data System (ADS)

    Ribas-Ribas, M.; Hernández-Ayón, J. M.; Camacho-Ibar, V. F.; Cabello-Pasini, A.; Mejia-Trejo, A.; Durazo, R.; Galindo-Bect, S.; Souza, A. J.; Forja, J. M.; Siqueiros-Valencia, A.

    2011-12-01

    The role of coastal lagoons and estuaries as sources or sinks of inorganic carbon in upwelling areas has not been fully understood. During the months of May-July, 2005, we studied the dissolved inorganic carbon system in a coastal lagoon of northwestern Mexico during the strongest period of upwelling events. Along the bay, different scenarios were observed for the distributions of pH, dissolved inorganic carbon (DIC) and apparent oxygen utilization (AOU) as a result of different combinations of upwelling intensity and tidal amplitude. DIC concentrations in the outer part of the bay were controlled by mixing processes. At the inner part of the bay DIC was as low as 1800 μmol kg -1, most likely due to high water residence times and seagrass CO 2 uptake. It is estimated that 85% of San Quintín Bay, at the oceanic end, acted as a source of CO 2 to the atmosphere due to the inflow of CO 2-rich upwelled waters from the neighboring ocean with high positive fluxes higher than 30 mmol C m -2 d -1. In contrast, there was a net uptake of CO 2 and HCO 3- by the seagrass bed Zostera marina in the inner part of the bay, so the pCO 2 in this zone was below the equilibrium value and slightly negative CO 2 fluxes of -6 mmol C m -2 d -1. Our positive NEP and ΔDIC values indicate that Bahía San Quintín was a net autotrophic system during the upwelling season during 2005.

  18. Rapid Field Measurement of Dissolved Inorganic Carbon Based on CO{sub 2} Analysis

    SciTech Connect

    VESPER, DJ, Edenborn, Harry

    2012-01-01

    Dissolved inorganic carbon (DIC) is commonly measured in water and is an important parameter for understanding carbonate equilibrium, carbon cycling, and water-rock interaction. While accurate measurements can be made in the analytical laboratory, we have developed a rapid, portable technique that can be used to obtain accurate and precise data in the field as well.

  19. A simple, gravimetric method to quantify inorganic carbon in calcareous soils

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Total carbon (TC) in calcareous soils has two components: inorganic carbon (IC) as calcite and or dolomite and organic carbon (OC) in the soil organic matter. The IC must be measured and subtracted from TC to obtain OC. Our objective was to develop a simple gravimetric technique to quantify IC. Th...

  20. Solute specific scaling of inorganic nitrogen and phosphorus uptake in streams

    NASA Astrophysics Data System (ADS)

    Hall, R. O., Jr.; Baker, M. A.; Rosi-Marshall, E. J.; Tank, J. L.

    2013-04-01

    Stream ecosystem processes such as nutrient cycling may vary with stream position in the watershed. Using a scaling approach, we examined the relationship between stream size and nutrient uptake length, which represents the mean distance that a dissolved solute travels prior to removal from the water column. Ammonium uptake length increased proportionally with stream size measured as specific discharge (discharge/stream width) with a scaling exponent = 1.01. In contrast, the scaling exponent for nitrate (NO3-) was 1.19 and for soluble reactive phosphorus (SRP) was 1.35, suggesting that uptake lengths for these nutrients increased more rapidly than increases in specific discharge. Additionally, the ratio of nitrogen (N) uptake length to SRP uptake length declined with stream size; there was lower demand for SRP relative to N as stream size increased. Ammonium and NO3- uptake velocity positively related with stream metabolism, while SRP did not. Finally, we related the scaling of uptake length and specific discharge to that of stream length using Hack's law and downstream hydraulic geometry. Ammonium uptake length increased less than proportionally with distance from the headwaters, suggesting a strong role for larger streams and rivers in regulating nutrient transport.

  1. Controls of streamwater dissolved inorganic carbon dynamics in a forested watershed

    USGS Publications Warehouse

    Finlay, J.C.

    2003-01-01

    I investigated controls of stream dissolved inorganic carbon (DIC) sources and cycling along a stream size and productivity gradient in a temperate forested watershed in northern California. Dissolved CO2 (CO2 (aq)) dynamics in heavily shaded streams contrasted strongly with those of larger, open canopied sites. In streams with canopy cover > 97%, CO2 (aq) was highest during baseflow periods (up to 540 ??M) and was negatively related to discharge. Effects of algal photosynthesis on CO2 (aq) were minimal and stream CO2 (aq) was primarily controlled by groundwater CO2 (aq) inputs and degassing losses to the atmosphere. In contrast to the small streams. CO2 (aq) in larger, open-canopied streams was often below atmospheric levels at midday during baseflow and was positively related to discharge. Here, stream CO2 (aq) was strongly influenced by the balance between autotrophic and heterotrophic processes. Dynamics of HCO3- were less complex. HCO3- and Ca2+ were positively correlated, negatively related to discharge, and showed no pattern with stream size. Stable carbon isotope ratios of DIC (i.e. ??13C DIC) increased with stream size and discharge, indicating contrasting sources of DIC to streams and rivers. During summer baseflows, ??13C DIC were 13C-depleted in the smallest streams (minimum of -17.7???) due to the influence of CO2 (aq) derived from microbial respiration and HCO3- derived from carbonate weathering. ??13C DIC were higher (up to -6.6???) in the larger streams and rivers due to invasion of atmospheric CO2 enhanced by algal CO2 (aq) uptake. While small streams were influenced by groundwater inputs, patterns in CO2 (aq) and evidence from stable isotopes demonstrate the strong influence of stream metabolism and CO2 exchange with the atmosphere on stream and river carbon cycles.

  2. Determination of total dissolved inorganic carbon in freshwaters by reagent-free ion chromatography.

    PubMed

    Polesello, Stefano; Tartari, Gabriele; Giacomotti, Paola; Mosello, Rosario; Cavalli, Silvano

    2006-06-16

    Studies of inorganic carbon cycle in natural waters provide important information on the biological productivity and buffer capacity. Determination of total inorganic carbon, alkalinity and dissolved carbon dioxide gives an indication of the balance between photosynthesis and respiration by biota, both within the water column and sediments, and carbon dioxide transfers from the water column to the atmosphere. There are few methods to measure and distinguish the different forms of inorganic carbon, but all require a measure or an indirect quantification of total inorganic carbon. A direct measurement of TIC in water is made possible by the introduction of electrolytic generated hydroxide eluent in ion chromatography which allows to detect a chromatographic peak for carbonate. The advantage of this method is that all the inorganic forms of carbon are converted in carbonate at eluent pH and can be detected as a single peak by conductivity detection. Repeatability of carbonate peak was evaluated at different levels from 0.02 to 6 mequiv.l(-1) both in high purity water and in real samples and ranged from 1 to 9%. The calibration curve was not linear and has to be fitted by a quadratic curve. Limit of detection was estimated to be 0.02 mequiv.l(-1). Accuracy has been estimated by comparing ion chromatography method with total inorganic carbon calculated from alkalinity and pH. The correlation between the two methods was good (R(2)=0.978, n=141). The IC method has been applied to different typologies of surface waters (alpine and subalpine lakes and rivers) characterised by different chemical characteristics (alkalinity from 0.05 to 2 mequiv.l(-1) and pH from 6.7 to 8.5) and low total organic carbon concentrations. This analytical method allowed to describe the distribution of TIC along the water column of two Italian deep lakes. PMID:16620857

  3. Carbonation and CO{sub 2} uptake of concrete

    SciTech Connect

    Yang, Keun-Hyeok; Seo, Eun-A; Tae, Sung-Ho

    2014-04-01

    This study developed a reliable procedure to assess the carbon dioxide (CO{sub 2}) uptake of concrete by carbonation during the service life of a structure and by the recycling of concrete after demolition. To generalize the amount of absorbable CO{sub 2} per unit volume of concrete, the molar concentration of carbonatable constituents in hardened cement paste was simplified as a function of the unit content of cement, and the degree of hydration of the cement paste was formulated as a function of the water-to-cement ratio. The contribution of the relative humidity, type of finishing material for the concrete surface, and the substitution level of supplementary cementitious materials to the CO{sub 2} diffusion coefficient in concrete was reflected using various correction factors. The following parameters varying with the recycling scenario were also considered: the carbonatable surface area of concrete crusher-runs and underground phenomena of the decreased CO{sub 2} diffusion coefficient and increased CO{sub 2} concentration. Based on the developed procedure, a case study was conducted for an apartment building with a principal wall system and an office building with a Rahmen system, with the aim of examining the CO{sub 2} uptake of each structural element under different exposure environments during the service life and recycling of the building. As input data necessary for the case study, data collected from actual surveys conducted in 2012 in South Korea were used, which included data on the surrounding environments, lifecycle inventory database, life expectancy of structures, and recycling activity scenario. Ultimately, the CO{sub 2} uptake of concrete during a 100-year lifecycle (life expectancy of 40 years and recycling span of 60 years) was estimated to be 15.5%–17% of the CO{sub 2} emissions from concrete production, which roughly corresponds to 18%–21% of the CO{sub 2} emissions from the production of ordinary Portland cement. - Highlights: • CO

  4. Photoproduction of dissolved inorganic carbon in Swedish lakes

    NASA Astrophysics Data System (ADS)

    Koehler, B.; Landelius, T.; Tranvik, L. J.

    2012-04-01

    A substantial fraction of the dissolved organic carbon (DOC) in inland waters is mineralized to dissolved inorganic carbon (DIC) during passage towards the sea. Both microbial and photochemical mineralization have a share but there is currently no landscape-scale estimate of the contribution of photomineralization to total lake carbon dioxide emissions, restricting our understanding of inland-water C cycling. We use 1) DOC absorbance spectra measured during autumn 2009 in water samples from 1074 lakes distributed across Sweden, 2) light attenuation coefficients estimated based on correlations with absorption coefficients as established from literature data, 3) cloud-corrected, below-water-surface downwelling scalar irradiance spectra derived by modeling radiative transfer in the atmosphere and transmission into the water and 4) an apparent quantum yield spectrum determined in a humic lake, to calculate spectra of DIC photoproduction from 280 to 600 nm and from the water surface down to the mean lake depths. For each lake, we calculate DIC photoproduction rates on a daily base and integrate to obtain yearly flux estimates. Preliminary model results calculated for July 2009 show that, even though water color differed largely (25%- and 75%-quantiles of specific UV absorption coefficients at 254 nm (SUV A254) of 6.4 and 9.6 L mg C-1 m-1, respectively), depth-integrated DIC photoproduction rates showed a relatively small variation with a 25%-quantile of 12.0 and a 75%-quantile of 13.1 mg C m-2 day-1. These rather similar DIC photoproduction rates are explained by their different depth distributions: The brownest lake with a SUV A254 of 12.9 L mg C-1 m-1 had large surface DIC photoproduction rates of 887.9 mg C m-3 day-1 but photons were quickly attenuated with depth, with DIC photoproduction rates falling below 1 mg C m-3 day-1 already at ¯ 0.2 m depth (depth-integrated rate of 14.2 mg C m-2 day-1). The clearest lake with a SUV A254 of 1.4 L mg C-1 m-1 had nearly 100

  5. Enhancement of inorganic Martian dust simulant with carbon component and its effects on key characteristics of glutamatergic neurotransmission

    NASA Astrophysics Data System (ADS)

    Borisova, Tatiana; Krisanova, Natalia; Nazarova, Anastasiya; Borysov, Arseniy; Pastukhov, Artem; Pozdnyakova, Natalia; Dudarenko, Marina

    2016-07-01

    Evidence on the past existence of subsurface organic-bearing fluids on Mars was recently achieved basing on the investigation of organic carbon from the Tissint Martian meteorite (Lin et al., 2014). Tremendous amount of meteorites containing abundant carbon and carbon-enriched dust particles have reached the Earth daily (Pizzarello and Shock 2010). National Institute of Environmental Health Sciences/National Institute of Health panel of research scientists revealed recently that accumulating evidences suggest that nano-sized air pollution may have a significant impact on central nervous system in health and disease (Block et al., Neurotoxicology, 2012). During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the central nervous system (Oberdorster et al., 2004). Based on above facts, the aims of this study were: 1) to upgrade inorganic Martian dust stimulant derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, nanodiamonds; 2) to analyse acute effects of upgraded stimulant on the key characteristic of synaptic neurotransmission and to compare its effects with those of inorganic dust and carbon components per se. Acute administration of carbon-containing Martian dust analogue resulted in a significant decrease in Na+-dependent uptake of L-[14C]glutamate that is the major excitatory neurotransmitter in the central nervous system (CNS). The ambient level of the neurotransmitter in the preparation of isolated rat brain nerve terminals increased in the presence of carbon-contained Martian dust analogue. This fact indicated that carbon component of native Martian dust can have deleterious effects on extracellular glutamate homeostasis in the CNS, and so glutamatergic neurtransmission.

  6. Dissolved inorganic and organic nitrogen uptake in the coastal North Sea: A seasonal study

    NASA Astrophysics Data System (ADS)

    Moneta, Alessia; Veuger, Bart; van Rijswijk, Pieter; Meysman, Filip; Soetaert, Karline; Middelburg, Jack J.

    2014-06-01

    Nitrogen incorporation into total particulate suspended matter, hydrolysable amino acids and bacterial biomarker D-Alanine was assessed seasonally in the coastal North Sea using 15N-labeled ammonium, nitrate, nitrite and 15N- and 13C-labeled urea, glycine, leucine, phenylalanine, and two complex pools of dissolved organic matter (DOM) derived from algal and bacterial cultures (A-DOM, B-DOM). We investigated: 1) uptake rates for the various substrates and their contribution to total N uptake; 2) microbial preferences for the different N sources; 3) the coupling of C and N uptake from organic substrates; 4) the contribution of bacteria to the total microbial uptake of these substrates, and 5) the role of a complex pool of organic matter for plankton nutrition. Seasonality in the preferences for N substrates was observed, with A-DOM and B-DOM being preferred in autumn and winter whereas NH4+ was preferentially taken up in spring and summer. C and N uptake was coupled for all the organic substrates, except urea that was mainly used as a nitrogen source in summer and spring. Bacterial contribution to the uptake of A-DOM and B-DOM was, on an annual average, the lowest among the N-substrates. This suggests an important role for phytoplankton in the incorporation of complex organic matter and the importance of DOM for phytoplankton nutrition.

  7. Inorganic membranes for carbon capture and power generation

    NASA Astrophysics Data System (ADS)

    Snider, Matthew T.

    Inorganic membranes are under consideration for cost-effective reductions of carbon emissions from coal-fired power plants, both in the capture of pollutants post-firing and in the direct electrochemical conversion of coal-derived fuels for improved plant efficiency. The suitability of inorganic membrane materials for these purposes stems as much from thermal and chemical stability in coal plant operating conditions as from high performance in gas separations and power generation. Hydrophilic, micro-porous zeolite membrane structures are attractive for separating CO2 from N2 in gaseous waste streams due to the attraction of CO2 to the membrane surface and micropore walls that gives the advantage to CO2 transport. Recent studies have indicated that retention of the templating agent used in zeolite synthesis can further block N2 from the micropore interior and significantly improve CO2/N2 selectivity. However, the role of the templating agent in micro-porous transport has not been well investigated. In this work, gas sorption studies were conducted by high-pressure thermo-gravimetric analysis on Zeolite Y membrane materials to quantify the effect of the templating agent on CO2, N2, and H2O adsorption/desorption, as well as to examine the effect of humidification on overall membrane performance. In equilibrium conditions, the N2 sorption enthalpy was nearly unchanged by the presence of the templating agent, but the N2 pore occupation was reduced ˜1000x. Thus, the steric nature of the blocking of N2 from the micropores by the templating agent was confirmed. CO2 and H2O sorption enthalpies were similarly unaffected by the templating agent, and the micropore occupations were only reduced as much as the void volume taken up by the templating agent. Thus, the steric blocking effect did not occur for molecules more strongly attracted to the micropore walls. Additionally, in time-transient measurements the CO 2 and H2O mobilities were significantly enhanced by the presence

  8. Inorganic membranes for carbon capture and power generation

    NASA Astrophysics Data System (ADS)

    Snider, Matthew T.

    Inorganic membranes are under consideration for cost-effective reductions of carbon emissions from coal-fired power plants, both in the capture of pollutants post-firing and in the direct electrochemical conversion of coal-derived fuels for improved plant efficiency. The suitability of inorganic membrane materials for these purposes stems as much from thermal and chemical stability in coal plant operating conditions as from high performance in gas separations and power generation. Hydrophilic, micro-porous zeolite membrane structures are attractive for separating CO2 from N2 in gaseous waste streams due to the attraction of CO2 to the membrane surface and micropore walls that gives the advantage to CO2 transport. Recent studies have indicated that retention of the templating agent used in zeolite synthesis can further block N2 from the micropore interior and significantly improve CO2/N2 selectivity. However, the role of the templating agent in micro-porous transport has not been well investigated. In this work, gas sorption studies were conducted by high-pressure thermo-gravimetric analysis on Zeolite Y membrane materials to quantify the effect of the templating agent on CO2, N2, and H2O adsorption/desorption, as well as to examine the effect of humidification on overall membrane performance. In equilibrium conditions, the N2 sorption enthalpy was nearly unchanged by the presence of the templating agent, but the N2 pore occupation was reduced ˜1000x. Thus, the steric nature of the blocking of N2 from the micropores by the templating agent was confirmed. CO2 and H2O sorption enthalpies were similarly unaffected by the templating agent, and the micropore occupations were only reduced as much as the void volume taken up by the templating agent. Thus, the steric blocking effect did not occur for molecules more strongly attracted to the micropore walls. Additionally, in time-transient measurements the CO 2 and H2O mobilities were significantly enhanced by the presence

  9. Carbons for lithium ion cells prepared using sepiolite as an inorganic template.

    SciTech Connect

    Sandi, G.

    1998-12-09

    Carbon anodes for Li ion cells have been prepared by the in situ polymerization of olefins such as propylene and ethylene in the channels of sepiolite clay mineral. Upon dissolution of the inorganic framework, a disordered carbon was obtained. The carbon was tested as anode in coin cells, yielding a reversible capacity of 633 mAh/g, 1.70 times higher than the capacity delivered by graphitic carbon, assuming 100% efficiency. The coulombic efficiency was higher than 90%.

  10. Adsorption uptake of synthetic organic chemicals by carbon nanotubes and activated carbons.

    PubMed

    Brooks, A J; Lim, Hyung-nam; Kilduff, James E

    2012-07-27

    Carbon nanotubes (CNTs) have shown great promise as high performance materials for adsorbing priority pollutants from water and wastewater. This study compared uptake of two contaminants of interest in drinking water treatment (atrazine and trichloroethylene) by nine different types of carbonaceous adsorbents: three different types of single walled carbon nanotubes (SWNTs), three different sized multi-walled nanotubes (MWNTs), two granular activated carbons (GACs) and a powdered activated carbon (PAC). On a mass basis, the activated carbons exhibited the highest uptake, followed by SWNTs and MWNTs. However, metallic impurities in SWNTs and multiple walls in MWNTs contribute to adsorbent mass but do not contribute commensurate adsorption sites. Therefore, when uptake was normalized by purity (carbon content) and surface area (instead of mass), the isotherms collapsed and much of the CNT data was comparable to the activated carbons, indicating that these two characteristics drive much of the observed differences between activated carbons and CNT materials. For the limited data set here, the Raman D:G ratio as a measure of disordered non-nanotube graphitic components was not a good predictor of adsorption from solution. Uptake of atrazine by MWNTs having a range of lengths and diameters was comparable and their Freundlich isotherms were statistically similar, and we found no impact of solution pH on the adsorption of either atrazine or trichloroethylene in the range of naturally occurring surface water (pH = 5.7-8.3). Experiments were performed using a suite of model aromatic compounds having a range of π-electron energy to investigate the role of π-π electron donor-acceptor interactions on organic compound uptake by SWNTs. For the compounds studied, hydrophobic interactions were the dominant mechanism in the uptake by both SWNTs and activated carbon. However, comparing the uptake of naphthalene and phenanthrene by activated carbon and SWNTs, size exclusion effects

  11. Adsorption uptake of synthetic organic chemicals by carbon nanotubes and activated carbons

    NASA Astrophysics Data System (ADS)

    Brooks, A. J.; Lim, Hyung-nam; Kilduff, James E.

    2012-07-01

    Carbon nanotubes (CNTs) have shown great promise as high performance materials for adsorbing priority pollutants from water and wastewater. This study compared uptake of two contaminants of interest in drinking water treatment (atrazine and trichloroethylene) by nine different types of carbonaceous adsorbents: three different types of single walled carbon nanotubes (SWNTs), three different sized multi-walled nanotubes (MWNTs), two granular activated carbons (GACs) and a powdered activated carbon (PAC). On a mass basis, the activated carbons exhibited the highest uptake, followed by SWNTs and MWNTs. However, metallic impurities in SWNTs and multiple walls in MWNTs contribute to adsorbent mass but do not contribute commensurate adsorption sites. Therefore, when uptake was normalized by purity (carbon content) and surface area (instead of mass), the isotherms collapsed and much of the CNT data was comparable to the activated carbons, indicating that these two characteristics drive much of the observed differences between activated carbons and CNT materials. For the limited data set here, the Raman D:G ratio as a measure of disordered non-nanotube graphitic components was not a good predictor of adsorption from solution. Uptake of atrazine by MWNTs having a range of lengths and diameters was comparable and their Freundlich isotherms were statistically similar, and we found no impact of solution pH on the adsorption of either atrazine or trichloroethylene in the range of naturally occurring surface water (pH = 5.7-8.3). Experiments were performed using a suite of model aromatic compounds having a range of π-electron energy to investigate the role of π-π electron donor-acceptor interactions on organic compound uptake by SWNTs. For the compounds studied, hydrophobic interactions were the dominant mechanism in the uptake by both SWNTs and activated carbon. However, comparing the uptake of naphthalene and phenanthrene by activated carbon and SWNTs, size exclusion effects

  12. Adsorption uptake of synthetic organic chemicals by carbon nanotubes and activated carbons.

    PubMed

    Brooks, A J; Lim, Hyung-nam; Kilduff, James E

    2012-07-27

    Carbon nanotubes (CNTs) have shown great promise as high performance materials for adsorbing priority pollutants from water and wastewater. This study compared uptake of two contaminants of interest in drinking water treatment (atrazine and trichloroethylene) by nine different types of carbonaceous adsorbents: three different types of single walled carbon nanotubes (SWNTs), three different sized multi-walled nanotubes (MWNTs), two granular activated carbons (GACs) and a powdered activated carbon (PAC). On a mass basis, the activated carbons exhibited the highest uptake, followed by SWNTs and MWNTs. However, metallic impurities in SWNTs and multiple walls in MWNTs contribute to adsorbent mass but do not contribute commensurate adsorption sites. Therefore, when uptake was normalized by purity (carbon content) and surface area (instead of mass), the isotherms collapsed and much of the CNT data was comparable to the activated carbons, indicating that these two characteristics drive much of the observed differences between activated carbons and CNT materials. For the limited data set here, the Raman D:G ratio as a measure of disordered non-nanotube graphitic components was not a good predictor of adsorption from solution. Uptake of atrazine by MWNTs having a range of lengths and diameters was comparable and their Freundlich isotherms were statistically similar, and we found no impact of solution pH on the adsorption of either atrazine or trichloroethylene in the range of naturally occurring surface water (pH = 5.7-8.3). Experiments were performed using a suite of model aromatic compounds having a range of π-electron energy to investigate the role of π-π electron donor-acceptor interactions on organic compound uptake by SWNTs. For the compounds studied, hydrophobic interactions were the dominant mechanism in the uptake by both SWNTs and activated carbon. However, comparing the uptake of naphthalene and phenanthrene by activated carbon and SWNTs, size exclusion effects

  13. Inorganic carbon and fossil organic carbon are source of bias for quantification of sequestered carbon in mine spoil

    NASA Astrophysics Data System (ADS)

    Vindušková, Olga; Frouz, Jan

    2016-04-01

    Carbon sequestration in mine soils has been studied as a possibility to mitigate the rising atmospheric CO2 levels and to improve mine soil quality (Vindu\\vsková and Frouz, 2013). Moreover, these soils offer an unique opportunity to study soil carbon dynamics using the chronosequence approach (using a set of sites of different age on similar parent material). However, quantification of sequestered carbon in mine soils is often complicated by fossil organic carbon (e.g., from coal or kerogen) or inorganic carbon present in the spoil. We present a methodology for quantification of both of these common constituents of mine soils. Our recommendations are based on experiments done on post-mining soils in Sokolov basin, Czech Republic. Here, fossil organic carbon is present mainly as kerogen Type I and II and represents 2-6 wt.% C in these soils. Inorganic carbon in these soils is present mainly as siderite (FeCO3), calcite (CaCO3), and dolomite (CaMg(CO3)2). All of these carbonates are often found in the overburden of coal seams thus being a common constituent of post-mining soils in the world. Vindu\\vsková O, Frouz J, 2013. Soil carbon accumulation after open-cast coal and oil shale mining in Northern Hemisphere: a quantitative review. ENVIRONMENTAL EARTH SCIENCES, 69: 1685-1698. Vindu\\vsková O, Dvořáček V, Prohasková A, Frouz J. 2014. Distinguishing recent and fossil organic matter - A critical step in evaluation of post-mining soil development - using near infrared spectroscopy. ECOLOGICAL ENGINEERING. 73: 643-648. Vindu\\vsková O, Sebag D, Cailleau G, Brus J, Frouz J. 2015. Methodological comparison for quantitative analysis of fossil and recently derived carbon in mine soils with high content of aliphatic kerogen. ORGANIC GEOCHEMISTRY, 89-90:14-22.

  14. Temperature Dependence of Photodegradation of Dissolved Organic Matter to Dissolved Inorganic Carbon and Particulate Organic Carbon

    PubMed Central

    Porcal, Petr; Dillon, Peter J.; Molot, Lewis A.

    2015-01-01

    Photochemical transformation of dissolved organic matter (DOM) has been studied for more than two decades. Usually, laboratory or “in-situ” experiments are used to determine photodegradation variables. A common problem with these experiments is that the photodegradation experiments are done at higher than ambient temperature. Five laboratory experiments were done to determine the effect of temperature on photochemical degradation of DOM. Experimental results showed strong dependence of photodegradation on temperature. Mathematical modeling of processes revealed that two different pathways engaged in photochemical transformation of DOM to dissolved inorganic carbon (DIC) strongly depend on temperature. Direct oxidation of DOM to DIC dominated at low temperatures while conversion of DOM to intermediate particulate organic carbon (POC) prior to oxidation to DIC dominated at high temperatures. It is necessary to consider this strong dependence when the results of laboratory experiments are interpreted in regard to natural processes. Photodegradation experiments done at higher than ambient temperature will necessitate correction of rate constants. PMID:26106898

  15. Bioengineering Aspects of Inorganic Carbon Supply to Mass Algal Cultures: Final Report

    SciTech Connect

    Goldman, J. C.

    1981-04-01

    Regardless of the application, the basic biotechnology of large-scale outdoor cultures involves many common features, particularly in the requirement for adequate nutrients such as carbon, nitrogen, and phosphorus to ensure that light is the sole limiting yield determinant. Whereas the required quantities of nitrogen and phosphorus are fairly simple, to estimate, those for inorganic carbon are far more complex.

  16. Inorganic carbon turnover caused by digestion of carbonate sands and metabolic activity of holothurians

    NASA Astrophysics Data System (ADS)

    Schneider, Kenneth; Silverman, Jacob; Kravitz, Ben; Rivlin, Tanya; Schneider-Mor, Aya; Barbosa, Sergio; Byrne, Maria; Caldeira, Ken

    2013-11-01

    Recent measurements have shown that holothurians (sea cucumbers) may play an important role in the cycling of CaCO3 in tropical coral reef systems through ingestion and processing of carbonate sediment. In this report, we present estimates of inorganic carbon turnover rates determined from laboratory incubations of Holothuria atra, Holothuria leucospilota and Stichopus herrmanni. The pH values of the gut lumen ranged from 7.0 to 7.6 when digestive tracts were filled with sediment compared with 6.1-6.7 in animals with empty digestive tracts. Empty gut volume estimates for H. atra and S. herrmanni were 36 ± 4 mL and 151 ± 14 mL, respectively. Based on these measurements and the density and porosity of carbonate sediments of coral reefs, it is estimated that these species process 19 ± 2 kg and 80 ± 7 kg CaCO3 sand yr-1 per individual, respectively. The annual CaCO3 dissolution rates per H. atra and S. herrmanni individual are estimated to be 6.5 ± 1.9 g and 9.6 ± 1.4 g, respectively, suggesting that 0.05 ± 0.02% and 0.1 ± 0.02% of the CaCO3 processed through their gut annually is dissolved. During incubations the CaCO3 dissolution of the fecal casts was 0.07 ± 0.01%, 0.04 ± 0.01% and 0.21 ± 0.05% for H. atra, H. leucospilota and S. herrmanni, respectively. The CaCO3 saturation state in the incubation seawater decreased markedly due to a greater increase in dissolved inorganic carbon (DIC) relative to total alkalinity (AT) as a result of respiration by the animals. Our results support the hypothesis that deposit feeders such as sea cucumbers play an important ecological role in the coral reef CaCO3 cycle.

  17. Inorganic nanotubes: One contribution of 12 to a Theme 'Nanotechnology of carbon and related materials'

    NASA Astrophysics Data System (ADS)

    Tenne, Reshef; Rao, C. N. R.

    2004-10-01

    Following the discovery of carbon fullerenes and carbon nanotubes, it was hypothesized that nanoparticles of inorganic compounds with layered (two-dimensional) structure, such as MoS2, will not be stable against folding and form nanotubes and fullerene-like structures: IF. The synthesis of numerous other inorganic nanotubes has been reported in recent years. Various techniques for the synthesis of inorganic nanotubes, including high-temperature reactions and strategies based on 'chemie douce' (soft chemistry, i.e. low-temperature) processes, are described. First-principle, density functional theory based calculations are able to provide substantial information on the structure and properties of such nanotubes. Various properties of inorganic nanotubes, including mechanical, electronic and optical properties, are described in brief. Some potential applications of the nanotubes in tribology, protection against impact, (photo)catalysis, batteries, etc., are discussed.

  18. Uptake of inorganic and amino acid nitrogen from soil by Eucalyptus regnans and Eucalyptus pauciflora seedlings.

    PubMed

    Warren, Charles R

    2009-03-01

    This study examined whether two species of Eucalyptus can take up the amino acid glycine from soil and compared the uptake rate of glycine with the uptake rates of nitrate and ammonium. Ectomycorrhizal seedlings of two ecologically disparate species were studied: Eucalyptus regnans F. Muell., a fast-growing forest tree from low altitudes; and Eucalyptus pauciflora Sieber ex Spreng., a slow-growing tree that forms the alpine treeline. Seedlings were grown from seeds in field soil. When seedlings were 4-5 months old, soils were injected with equimolar mixtures of isotope-labeled glycine, ammonium and nitrate. Seedlings and soil were harvested 4 and 48 h later. Isotope ratio mass spectrometry analysis of (13)C and (15)N enrichment in plants receiving glycine indicated uptake of 1.5 (13)C for every (15)N at the 4-h harvest (versus 2:1 (13)C:(15)N in labeled glycine), suggesting intact uptake of around 75% of glycine. Gas chromatography-mass spectrometry analysis detected intact (13)C(2),(15)N-glycine in roots, but the pool of (13)C(2),(15)N-glycine was 10-500 times smaller than (13)C and (15)N excess, and no (13)C(2),(15)N-glycine was detected in shoots. This is consistent with glycine being taken up as an intact molecule that is subsequently metabolized rapidly. Both species took up more nitrate than ammonium, and glycine was the least preferred form of nitrogen (N). Microbes took up more N than seedlings, and their preference for N forms was the mirror image of the plant preferences. These data suggest that patterns of microbial uptake may determine plant preference for forms of N. PMID:19203963

  19. Do Radiocarbon signatures of Surface Ocean Dissolved Inorganic Carbon and Plankton Carbon Agree?

    NASA Astrophysics Data System (ADS)

    Bertrand, C. J.; Griffin, S.; Druffel, E. R.; Walker, B. D.

    2012-12-01

    It is usually assumed that Δ14C of dissolved inorganic carbon (DIC) and plankton in surface seawater are similar, but very little research has been conducted to answer this question. We report radiocarbon measurements of DIC (Druffel, et al., 2010, Masiello, et al., 1998) and plankton samples collected from the same surface water samples during 10 cruises from 1995-2004. The majority of the samples are collected from "Station M" in the northeast Pacific, 220 km off Point Conception, California (34° 50'N, 123° 00'W). The Δ14C values decrease with time, reflecting the decrease in bomb carbon, with most values ranging from 20-60‰. We will show that the trend does display seasonal variability; however it is not consistent from year to year. In general, the DIC Δ14C values are equal to or are higher than the plankton Δ14C values. This trend may indicate that plankton can take up older carbon from deeper in the water column. The presence of very old carbon was observed for two of our plankton samples. We believe that these results indicate contamination by plastic material, which have been shown to be present in convergent zones of the open ocean.

  20. Inorganic Carbon Turnover caused by Digestion of Carbonate Sands and Metabolic Activity of Holothurians

    SciTech Connect

    Schneider, Kenneth; Silverman, Jacob; Kravitz, Benjamin S.; Rivlin, Tanya; Schneider-Mor, Aya; Barbosa, Sergio; Byrne, Maria; Caldeira, Ken

    2013-11-20

    Recent measurements have shown that holothurians (sea cucumbers) play an important role in the cycling of CaCO3 in tropical coral reef systems through ingestion and processing of carbonate sediment. In this study inorganic additional aspects of carbon turnover were determined in laboratory incubations of Holothuria atra, H. leucospilota and Stichopus herrmanni from One Tree Reef, Great Barrier Reef. The pH values of the gut lumen ranged from 6.1 to 6.7 in animals with empty digestive tracts as opposed to 7.0 to 7.6 when digestive tracts were filled with sediment. Empty gut volume estimates for H. atra and S. herrmanni were 36 ± 4 mL and 151 ± 14 mL, respectively. Based on these measurements it is estimated that these species process 19 ± 2kg and 80 ± 7kg CaCO3 sand yr-1 per individual, respectively. The annual dissolution rates of H. atra and S. herrmanni of 6.5±1.9g and 9.6±1.4g, respectively, suggest that 0.05±0.02% and 0.1±0.02% of the CaCO3 processed through their gut annually is dissolved. During the incubations the CaCO3 dissolution was 0.07±0.01%, 0.04±0.01% and 0.21±0.05% of the fecal casts for H. atra, H. leucospilota and S. herrmanni, respectively. The CaCO3 saturation state for both aragonite and calcite minerals during laboratory incubations decreased markedly due to a greater increase in dissolved inorganic carbon (DIC) relative to total alkalinity (AT) as a result of respiration by the animals. Our results support the hypothesis that deposit feeders such as sea cucumbers play an important ecological role in the coral reef CaCO3 cycle.

  1. Independent Colimitation for Carbon Dioxide and Inorganic Phosphorus

    PubMed Central

    Spijkerman, Elly; de Castro, Francisco; Gaedke, Ursula

    2011-01-01

    Simultaneous limitation of plant growth by two or more nutrients is increasingly acknowledged as a common phenomenon in nature, but its cellular mechanisms are far from understood. We investigated the uptake kinetics of CO2 and phosphorus of the algae Chlamydomonas acidophila in response to growth at limiting conditions of CO2 and phosphorus. In addition, we fitted the data to four different Monod-type models: one assuming Liebigs Law of the minimum, one assuming that the affinity for the uptake of one nutrient is not influenced by the supply of the other (independent colimitation) and two where the uptake affinity for one nutrient depends on the supply of the other (dependent colimitation). In addition we asked whether the physiological response under colimitation differs from that under single nutrient limitation. We found no negative correlation between the affinities for uptake of the two nutrients, thereby rejecting a dependent colimitation. Kinetic data were supported by a better model fit assuming independent uptake of colimiting nutrients than when assuming Liebigs Law of the minimum or a dependent colimitation. Results show that cell nutrient homeostasis regulated nutrient acquisition which resulted in a trade-off in the maximum uptake rates of CO2 and phosphorus, possibly driven by space limitation on the cell membrane for porters for the different nutrients. Hence, the response to colimitation deviated from that to a single nutrient limitation. In conclusion, responses to single nutrient limitation cannot be extrapolated to situations where multiple nutrients are limiting, which calls for colimitation experiments and models to properly predict growth responses to a changing natural environment. These deviations from single nutrient limitation response under colimiting conditions and independent colimitation may also hold for other nutrients in algae and in higher plants. PMID:22145031

  2. A green sorbent of esterified egg-shell membrane for highly selective uptake of arsenate and speciation of inorganic arsenic.

    PubMed

    Chen, Ming-Li; Gu, Cui-Bo; Yang, Ting; Sun, Yan; Wang, Jian-Hua

    2013-11-15

    Egg-shell membrane (ESM) is a promising adsorbent for heavy metal uptake. However, carboxylic groups on ESM surface barrier arsenic adsorption. Herein, ESM is modified by esterification and the methyl esterified egg-shell membrane (MESM) possesses positive charge within pH 1-9. As a novel green sorbent material, MESM exhibits 200-fold improvement on sorption capacity of arsenate with respect to bare ESM. It presents an ultra-high selectivity of 256:1 toward arsenate against arsenite. At pH 6, 100% sorption efficiency is achieved for 2 μg L(-1) As(V) by 10 mg MESM, while virtually no adsorption of As(III) is observed. This provides great potential for selective sorption of arsenate in the presence of arsenite. By loading 4.0 mL sample within 0.05-5.00 μg L(-1) As(V) followed by elution with 300 μL HCl (1.5 mol L(-1)), a detection limit of 15 ng L(-1) is obtained along with a RSD of 3.5% at 0.5 μg L(-1). Total inorganic arsenic is achieved by converting As(III) to As(V) and following the same sorption process. This procedure is applied for arsenate determination and inorganic arsenic speciation in Hijiki and water samples. The results are confirmed by graphite furnace atomic absorption spectrometry and spiking recovery.

  3. Inorganic nitrogen control in wastewater treatment ponds from a fish farm (Orbetello, Italy): denitrification versus Ulva uptake.

    PubMed

    Bartoli, Marco; Nizzoli, Daniele; Naldi, Mariachiara; Vezzulli, Luigi; Porrello, Salvatore; Lenzi, Mauro; Viaroli, Pierluigi

    2005-11-01

    The aim of this study was to quantify the N removal efficiency of an Ulva-based phytotreatment system receiving wastewaters from a land-based fish farm (Orbetello, Italy), to identify the main biogeochemical pathways involved and to provide basic guidelines for treatment implementation and management. Fluxes of O2 and nutrients in bare and in Ulva colonised sediments were assessed by light/dark core incubations; denitrification by the isotope pairing technique and Ulva growth by in situ incubation of macroalgal disks in cages. O2 and nutrient budgets were estimated as sum of individual processes and further verified by 24-h investigations of overall inlet and outlet loads. Ulva uptake (up to 7.8 mmol Nm(-2) h(-1)) represented a net sink for water column and regenerated NH4+ whilst N removal via denitrification (10-170 micromol Nm(-2) h(-1)) accounted for a small percentage of inorganic nitrogen load (<5%). Laboratory experiments demonstrated a high potential for denitrification (over 800 microM Nm(-2) h(-1)) indicating that N loss could be enhanced. The control of Ulva standing stocks by optimised harvesting of surplus biomass may represent an effective strategy to maximise DIN removal and could result in the assimilation of approximately 50% of produced inorganic nitrogen. PMID:16045942

  4. Manure and fertilizer effects on organic and inorganic carbon losses and budget for an irrigated corn field

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC and...

  5. [Exchange Fluxes and Coupling Relationship of Dissolved Inorganic Carbon and Dissolved Organic Carbon Across the Water-Sediment Interface in Lakes].

    PubMed

    Wang, Wei-ying; Lü, Chang-wei; He, Jiang; Zuo, Le; Yan, Dao-hao

    2015-10-01

    In this work, the exchange fluxes and coupling relationship of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) were investigated across the water-sediment interface in Lake Wuliangsuhai and Daihai by employing columnar simulation method. The results showed that the sediments in non-Phragmitescommunis area from Lake Wuliangsuhai functioned as the sources of DIC and DOC for overlying water, whereas the sediments from Lake Daihai as the sinks during the period of summer (90 days). In the experimental period, the average exchange rates of DIC and DOC were 71.07 mmol x (m2 x d)(-1) and 185.09 mmol x (m2 x d)(-1) in non-Phragmitescommunis area from Lake Wuliangsuhai, respectively; while in Lake Daihai, they were 155.75 mmol x (m2 x d)(-1) and -1478.08 mmol x (m2 x d)(-1) in shoal water zone, and -486.53 mmol x (m2 x d)(-1) and -1274.02 mmol x (m2 x d)(-1) in deep water zone, respectively. The coupling effects between DIC and DOC were governed by hydrobios, microbial uptake, abiotic and microbiological degradation in Lake Wuliangsuhai and in shoal water zone of Lake Daihai; while they were closely related to the coprecipitation process of CaCO3 and the fraction distribution of inorganic carbon in sediments in deep water zone of Lake Daihai. In summary, the sink or source functions of sediments could be considered as the results of synthetic action of lake types, offshore distance, geohydrochemistry and the fraction distribution of inorganic carbon.

  6. Constraints on Early Triassic carbon cycle dynamics from paired organic and inorganic carbon isotope records

    NASA Astrophysics Data System (ADS)

    Meyer, K. M.; Yu, M.; Lehrmann, D.; van de Schootbrugge, B.; Payne, J. L.

    2013-01-01

    Large δ13C excursions, anomalous carbonate precipitates, low diversity assemblages of small fossils, and evidence for marine euxinia in uppermost Permian and Lower Triassic strata bear more similarity to Neoproterozoic carbonates than to the remainders of the Permian and Triassic systems. Middle Triassic diversification of marine ecosystems coincided with the waning of anoxia and stabilization of the global carbon cycle, suggesting that environment-ecosystem linkages were important to biological recovery. However, the Earth system behavior responsible for these large δ13C excursions remains poorly constrained. Here we present a continuous Early Triassic δ13Corg record from south China and use it to test the extent to which Early Triassic excursions in δ13Ccarb record changes in the δ13C of marine dissolved inorganic carbon (DIC). Regression analysis demonstrates a significant positive correlation between δ13Corg and δ13Ccarb across multiple sections that span a paleoenvironmental gradient. Such a correlation is incompatible with diagenetic alteration because no likely mechanism will alter both δ13Corg and δ13Ccarb records in parallel and therefore strongly indicates a primary depositional origin. A simple explanation for this correlation is that a substantial portion of the preserved Corg was derived from the contemporaneous DIC pool, implying that the observed excursions reflect variation in the δ13C of the exogenic carbon reservoir (ocean, atmosphere, biomass). These findings support existing evidence that large δ13C excursions are primary and therefore strengthen the case that large-scale changes to the carbon cycle were mechanistically linked to the low diversity and small size of Early Triassic fossils. Associated sedimentary and biogeochemical phenomena further suggest that similar associations in Neoproterozoic and Cambrian strata may reflect the same underlying controls.

  7. Assessment of methods for organic and inorganic carbon quantification in carbonate-containing Mediterranean soils

    NASA Astrophysics Data System (ADS)

    Apesteguia, Marcos; Virto, Iñigo; Plante, Alain

    2014-05-01

    Quantification of soil organic matter (SOM) stocks and fluxes continues to be an important endeavor in assessments of soil quality, and more broadly in assessments of ecosystem functioning. The quantification of SOM in alkaline, carbonate-containing soils, such as those found in Mediterranean areas, is complicated by the need to differentiate between organic carbon (OC) and inorganic carbon (IC), which continues to present methodological challenges. Acidification is frequently used to eliminate carbonates prior to soil OC quantification, but when performed in the liquid phase, can promote the dissolution and loss of a portion of the OC. Acid fumigation (AF) is increasingly preferred for carbonate removal, but its effectiveness is difficult to assess using conventional elemental and isotopic analyses. In addition, the potential effects of AF on SOM are not well characterized. The objective of the current study was to apply a multi-method approach to determine the efficacy of carbonate removal by AF and its effects on the residual SOM. We selected a set of 24 surface agricultural soils representing a large range of textures, SOM contents and presumed carbonate contents. For each soil, OC was determined using wet combustion (Walkley-Black) and IC was determined using the calcimeter method. Samples were then subjected to elemental (total C) and isotopic (δ13C) analyses by dry combustion using a Costech autoanalyzer coupled to a Thermo Finnigan Delta Plus isotope ratio mass spectrometer (IRMS) before and after AF. IC was equated to total C determined after fumigation, and OC was estimated as the different in total C before and after AF. Samples were also subjected to ramped oxidation using a Netzsch STA109 PC Luxx thermal analyzer coupled to a LICOR 820A infrared gas analyzer (IRGA). Quantification of OC was performed using evolved gas analysis of CO2 (CO2-EGA) in the exothermic region 200-500° C associated with organic matter combustion. IC was quantified by CO2-EGA

  8. Microbial group specific uptake kinetics of inorganic phosphate and adenosine-5'-triphosphate (ATP) in the north pacific subtropical gyre.

    PubMed

    Björkman, Karin; Duhamel, Solange; Karl, David M

    2012-01-01

    We investigated the concentration dependent uptake of inorganic phosphate (Pi) and adenosine-5'-triphosphate (ATP) in microbial populations in the North Pacific Subtropical Gyre (NPSG). We used radiotracers to measure substrate uptake into whole water communities, differentiated microbial size classes, and two flow sorted groups; Prochlorococcus (PRO) and non-pigmented bacteria (NPB). The Pi concentrations, uptake rates, and Pi pool turnover times (Tt) were (mean, ±SD); 54.9 ± 35.0 nmol L(-1) (n = 22), 4.8 ± 1.9 nmol L(-1) day(-1) (n = 19), and 14.7 ± 10.2 days (n = 19), respectively. Pi uptake into >2 μm cells was on average 12 ± 7% (n = 15) of the total uptake. The kinetic response to Pi (10-500 nmol L(-1)) was small, indicating that the microorganisms were close to their maximum uptake velocity (V(max)). V(max) averaged 8.0 ± 3.6 nmol L(-1) day(-1) (n = 19) in the >0.2 μm group, with half saturation constants (K(m)) of 40 ± 28 nmol L(-1) (n = 19). PRO had three times the cell specific Pi uptake rate of NPB, at ambient concentrations, but when adjusted to cells L(-1) the rates were similar, and these two groups were equally competitive for Pi. The Tt of γ-P-ATP in the >0.2 μm group were shorter than for the Pi pool (4.4 ± 1.0 days; n = 6), but this difference diminished in the larger size classes. The kinetic response to ATP was large in the >0.2 μm class with V(max) exceeding the rates at ambient concentrations (mean 62 ± 27 times; n = 6) with a mean V(max) for γ-P-ATP of 2.8 ± 1.0 nmol L(-1) day(-1), and K(m) at 11.5 ± 5.4 nmol L(-1) (n = 6). The NPB contribution to γ-P-ATP uptake was high (95 ± 3%, n = 4) at ambient concentrations but decreased to ∼50% at the highest ATP amendment. PRO had K(m) values 5-10 times greater than NPB. The above indicates that PRO and NPB were in close competition in terms of Pi

  9. Multiyear Precipitation Reduction Strongly Decreases Carbon Uptake over Northern China

    NASA Astrophysics Data System (ADS)

    Yuan, Wenping

    2014-05-01

    Drought has been a concern in global and regional water, carbon and energy cycles. From 1999-2011, Northern China experienced a multiyear precipitation reduction that significantly decreased water availability as indicated by the Palmer Drought Severity Index and soil moisture measurements. In this study, a light use efficiency model (EC-LUE) and an ecosystem physiological model (IBIS) were used to characterize the impacts of long-term drought on terrestrial carbon fluxes in Northern China. EC-LUE and IBIS models showed that the reduction of averaged GPP of 0.09 and 0.05 Pg C yr-1 during 1999-2011 compared with 1982-1998. Based on the IBIS model, simulated ecosystem respiration underwent an insignificant decrease from 1999-2011. The multiyear precipitation reduction changed the regional carbon uptake of 0.011 Pg C yr-1 from 1982-1998 to a net source of 0.018 Pg C yr-1 from 1999-2011, and the ecosystem during the 13 years (1999 to 2011) released 0.23 Pg C to atmosphere which is 1.31 times that total carbon sink of 17 years prior to 1998 (0.18 Pg C). Moreover, a pronounced decrease in maize yield in almost all provinces in the study region was found from 1999-2011 versus the average of yield from1978-2011. The largest maize yield reduction occurred in Beijing (2499 kg ha-1 yr-1), Jilin (2180 kg ha-1 yr-1), Tianjing (1923 kg ha-1 yr-1) and Heilongjiang (1791 kg ha-1 yr-1), and the maize yield anomaly was significantly correlated with the annual precipitation over the entire study area. Our results revealed that recent climate change, especially drought-induced water stress, is the dominant cause of the reduction in the terrestrial carbon sink over Northern China.

  10. Improved cellular uptake of functionalized single-walled carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Antonelli, A.; Serafini, S.; Menotta, M.; Sfara, C.; Pierigé, F.; Giorgi, L.; Ambrosi, G.; Rossi, L.; Magnani, M.

    2010-10-01

    Single-walled carbon nanotubes (SWNTs) due to their unique structural and physicochemical properties, have been proposed as delivery systems for a variety of diagnostic and therapeutic agents. However, SWNTs have proven difficult to solubilize in aqueous solution, limiting their use in biological applications. In an attempt to improve SWNTs' solubility, biocompatibility, and to increase cell penetration we have thoroughly investigated the construction of carbon scaffolds coated with aliphatic carbon chains and phospholipids to obtain micelle-like structures. At first, oxidized SWNTs (2370 ± 30 nmol mg - 1 of SWNTs) were covalently coupled with an alcoholic chain (stearyl alcohol, C18H37OH; 816 nmol mg - 1 of SWNTs). Subsequently, SWNTs-COOC18H37 derivatives were coated with phosphatidylethanolamine (PE) or -serine (PS) phospholipids obtaining micelle-like structures. We found that cellular uptake of these constructs by phagocytic cells occurs via an endocytotic mechanism for constructs larger than 400 nm while occurs via diffusion through the cell membrane for constructs up to 400 nm. The material that enters the cell by phagocytosis is actively internalized by macrophages and localizes inside endocytotic vesicles. In contrast the material that enters the cells by diffusion is found in the cell cytosol. In conclusion, we have realized new biomimetic constructs based on alkylated SWNTs coated with phospholipids that are efficiently internalized by different cell types only if their size is lower than 400 nm. These constructs are not toxic to the cells and could now be explored as delivery systems for non-permeant cargoes.

  11. Does canopy nitrogen uptake enhance carbon sequestration by trees?

    PubMed

    Nair, Richard K F; Perks, Micheal P; Weatherall, Andrew; Baggs, Elizabeth M; Mencuccini, Maurizio

    2016-02-01

    Temperate forest (15) N isotope trace experiments find nitrogen (N) addition-driven carbon (C) uptake is modest as little additional N is acquired by trees; however, several correlations of ambient N deposition against forest productivity imply a greater effect of atmospheric nitrogen deposition than these studies. We asked whether N deposition experiments adequately represent all processes found in ambient conditions. In particular, experiments typically apply (15) N to directly to forest floors, assuming uptake of nitrogen intercepted by canopies (CNU) is minimal. Additionally, conventional (15) N additions typically trace mineral (15) N additions rather than litter N recycling and may increase total N inputs above ambient levels. To test the importance of CNU and recycled N to tree nutrition, we conducted a mesocosm experiment, applying 54 g N/(15) N ha(-1)  yr(-1) to Sitka spruce saplings. We compared tree and soil (15) N recovery among treatments where enrichment was due to either (1) a (15) N-enriched litter layer, or mineral (15) N additions to (2) the soil or (3) the canopy. We found that 60% of (15) N applied to the canopy was recovered above ground (in needles, stem and branches) while only 21% of (15) N applied to the soil was found in these pools. (15) N recovery from litter was low and highly variable. (15) N partitioning among biomass pools and age classes also differed among treatments, with twice as much (15) N found in woody biomass when deposited on the canopy than soil. Stoichiometrically calculated N effect on C uptake from (15) N applied to the soil, scaled to real-world conditions, was 43 kg C kg N(-1) , similar to manipulation studies. The effect from the canopy treatment was 114 kg C kg N(-1) . Canopy treatments may be critical to accurately represent N deposition in the field and may address the discrepancy between manipulative and correlative studies.

  12. Does canopy nitrogen uptake enhance carbon sequestration by trees?

    PubMed

    Nair, Richard K F; Perks, Micheal P; Weatherall, Andrew; Baggs, Elizabeth M; Mencuccini, Maurizio

    2016-02-01

    Temperate forest (15) N isotope trace experiments find nitrogen (N) addition-driven carbon (C) uptake is modest as little additional N is acquired by trees; however, several correlations of ambient N deposition against forest productivity imply a greater effect of atmospheric nitrogen deposition than these studies. We asked whether N deposition experiments adequately represent all processes found in ambient conditions. In particular, experiments typically apply (15) N to directly to forest floors, assuming uptake of nitrogen intercepted by canopies (CNU) is minimal. Additionally, conventional (15) N additions typically trace mineral (15) N additions rather than litter N recycling and may increase total N inputs above ambient levels. To test the importance of CNU and recycled N to tree nutrition, we conducted a mesocosm experiment, applying 54 g N/(15) N ha(-1)  yr(-1) to Sitka spruce saplings. We compared tree and soil (15) N recovery among treatments where enrichment was due to either (1) a (15) N-enriched litter layer, or mineral (15) N additions to (2) the soil or (3) the canopy. We found that 60% of (15) N applied to the canopy was recovered above ground (in needles, stem and branches) while only 21% of (15) N applied to the soil was found in these pools. (15) N recovery from litter was low and highly variable. (15) N partitioning among biomass pools and age classes also differed among treatments, with twice as much (15) N found in woody biomass when deposited on the canopy than soil. Stoichiometrically calculated N effect on C uptake from (15) N applied to the soil, scaled to real-world conditions, was 43 kg C kg N(-1) , similar to manipulation studies. The effect from the canopy treatment was 114 kg C kg N(-1) . Canopy treatments may be critical to accurately represent N deposition in the field and may address the discrepancy between manipulative and correlative studies. PMID:26391113

  13. Interannual stability of organic to inorganic carbon production on a coral atoll

    NASA Astrophysics Data System (ADS)

    Kwiatkowski, Lester; Albright, Rebecca; Hosfelt, Jessica; Nebuchina, Yana; Ninokawa, Aaron; Rivlin, Tanya; Sesboüé, Marine; Wolfe, Kennedy; Caldeira, Ken

    2016-04-01

    Ocean acidification has the potential to adversely affect marine calcifying organisms, with substantial ocean ecosystem impacts projected over the 21st century. Characterizing the in situ sensitivity of calcifying ecosystems to natural variability in carbonate chemistry may improve our understanding of the long-term impacts of ocean acidification. We explore the potential for intensive temporal sampling to isolate the influence of carbonate chemistry on community calcification rates of a coral reef and compare the ratio of organic to inorganic carbon production to previous studies at the same location. Even with intensive temporal sampling, community calcification displays only a weak dependence on carbonate chemistry variability. However, across three years of sampling, the ratio of organic to inorganic carbon production is highly consistent. Although further work is required to quantify the spatial variability associated with such ratios, this suggests that these measurements have the potential to indicate the response of coral reefs to ongoing disturbance, ocean acidification, and climate change.

  14. Proxies for Metabolic Carbon (CM) and/or Dissolved Inorganic Carbon (DIC) Contributions to Mollusk Shell Carbonate

    NASA Astrophysics Data System (ADS)

    Higgins, P.

    2010-12-01

    The isotopic values of dissolved inorganic carbon (DIC) in surface waters reflect biogeochemical cycling of carbon, and therefore overall environmental conditions. Understanding past records of DIC can facilitate interpretations of ancient environmental conditions, and can be used to clarify effects of climate change in continental environments. The Hanna Formation, exposed in the Hanna Basin of south-central Wyoming, includes strata that document the Paleocene-Eocene Thermal Maximum (PETM). The majority of the Hanna Formation was deposited in fluvial environments, with the notable exception of two lacustrine intervals which bracket the Paleocene-Eocene transition. Abundant mollusk remains, including unionid bivalves, are present in the lacustrine units, and could potentially provide an intra-annual record of DIC of lake waters during the PETM. Although land snails assemble their shells mostly from respired CO2 (metabolic carbon, CM), aquatic mollusks use environmental CO2 (in the form of DIC) for shell construction, with some unknown contribution from CM. In the present study, an attempt was made to quantify the contribution of CM to the shells of unionid bivalves in the Hanna Formation. The carbon isotopic value of presumably inorganically precipitated limestone was used as a proxy for average annual DIC, though this interpretation is complicated due to the presence of microbially precipitated limestones (stromatolites) throughout the Hanna Formation. The carbon isotopic value of organic matter (mostly coal) as a proxy for average dissolved organic carbon (DOC), which is then used to approximate the carbon isotopic value of CM. Over all, carbon isotopic values from fossil shells increase over time in the Hanna Formation, presumably due to increased productivity in the lakes in response to the warming during the PETM. If limestones in the Hanna Formation were inorganically precipitated, as much as 30% of the carbonate in the shells of mollusks may be derived from

  15. Linking calcification by exotic snails to stream inorganic carbon cycling.

    PubMed

    Hotchkiss, Erin R; Hall, Robert O

    2010-05-01

    Biotic calcification is rarely considered in freshwater C budgets, despite calculations suggesting that calcifying animals can alter inorganic C cycling. Most studies that have quantified biocalcification in aquatic ecosystems have not directly linked CO(2) fluxes from biocalcification with whole-ecosystem rates of inorganic C cycling. The freshwater snail, Melanoides tuberculata, has achieved a high abundance and 37.4 g biomass m(-2) after invading Kelly Warm Springs in Grand Teton National Park. This high biomass suggests that introduced populations of Melanoides may alter ecosystem processes. We measured Melanoides growth rates and biomass to calculate the production of biomass, shell mass, and CO(2). We compared Melanoides biomass and inorganic C production with ecosystem C pools and fluxes, as well as with published rates of CO(2) production by other calcifying organisms. Melanoides calcification in Kelly Warm Springs produced 12.1 mmol CO(2) m(-2) day(-1) during summer months. We measured high rates of gross primary productivity and respiration in Kelly Warm Springs (-378 and 533 mmol CO(2) m(-2) day(-1), respectively); CO(2) produced from biocalcification increased net CO(2) production in Kelly Warm Springs from 155 to 167 mmol CO(2) m(-2) day(-1). This rate of CO(2) production via biocalcification is within the published range of calcification by animals. But these CO(2) fluxes are small when compared to ecosystem C fluxes from stream metabolism. The influence of animals is relative to ecosystem processes, and should always be compared with ecosystem fluxes to quantify the importance of a specific animal in its environment.

  16. Stable carbon isotopes of dissolved inorganic carbon for a zonal transect across the subpolar North Atlantic Ocean in summer 2014

    NASA Astrophysics Data System (ADS)

    Humphreys, Matthew P.; Greatrix, Florence M.; Tynan, Eithne; Achterberg, Eric P.; Griffiths, Alex M.; Fry, Claudia H.; Garley, Rebecca; McDonald, Alison; Boyce, Adrian J.

    2016-06-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in samples collected during June-July 2014 in the subpolar North Atlantic. Sample collection was carried out on the RRS James Clark Ross cruise JR302, part of the "Radiatively Active Gases from the North Atlantic Region and Climate Change" (RAGNARoCC) research programme. The observed δ13CDIC values for cruise JR302 fall in a range from -0.07 to +1.95 ‰, relative to the Vienna Pee Dee Belemnite standard. From duplicate samples collected during the cruise, the 1σ precision for the 341 results is 0.08 ‰, which is similar to our previous work and other studies of this kind. We also performed a cross-over analysis using nearby historical δ13CDIC data, which indicated that there were no significant systematic offsets between our measurements and previously published results. We also included seawater reference material (RM) produced by A. G. Dickson (Scripps Institution of Oceanography, USA) in every batch of analysis, enabling us to improve upon the calibration and quality-control procedures from a previous study. The δ13CDIC is consistent within each RM batch, although its value is not certified. We report δ13CDIC values of 1.15 ± 0.03 ‰ and 1.27 ± 0.05 ‰ for batches 141 and 144 respectively. Our JR302 δ13CDIC data can be used - along with measurements of other biogeochemical variables - to constrain the processes that control DIC in the interior ocean, in particular the oceanic uptake of anthropogenic carbon dioxide and the biological carbon pump. Our δ13CDIC results are available from the British Oceanographic Data Centre - doi:10.5285/22235f1a-b7f3-687f-e053-6c86abc0c8a6.

  17. Impacts of Labile Organic Carbon Concentration on Organic and Inorganic Nitrogen Utilization by a Stream Biofilm Bacterial Community

    PubMed Central

    Leff, Laura G.

    2013-01-01

    In aquatic ecosystems, carbon (C) availability strongly influences nitrogen (N) dynamics. One manifestation of this linkage is the importance in the dissolved organic matter (DOM) pool of dissolved organic nitrogen (DON), which can serve as both a C and an N source, yet our knowledge of how specific properties of DOM influence N dynamics are limited. To empirically examine the impact of labile DOM on the responses of bacteria to DON and dissolved inorganic nitrogen (DIN), bacterial abundance and community composition were examined in controlled laboratory microcosms subjected to various combinations of dissolved organic carbon (DOC), DON, and DIN treatments. Bacterial communities that had colonized glass beads incubated in a stream were treated with various glucose concentrations and combinations of inorganic and organic N (derived from algal exudate, bacterial protein, and humic matter). The results revealed a strong influence of C availability on bacterial utilization of DON and DIN, with preferential uptake of DON under low C concentrations. Bacterial DON uptake was affected by the concentration and by its chemical nature (labile versus recalcitrant). Labile organic N sources (algal exudate and bacterial protein) were utilized equally well as DIN as an N source, but this was not the case for the recalcitrant humic matter DON treatment. Clear differences in bacterial community composition among treatments were observed based on terminal restriction fragment length polymorphisms (T-RFLP) of 16S rRNA genes. C, DIN, and DON treatments likely drove changes in bacterial community composition that in turn affected the rates of DON and DIN utilization under various C concentrations. PMID:24038688

  18. Radioisotope tracer studies of inorganic carbon and Ca in microbially derived CaCO3

    USGS Publications Warehouse

    Yates, Kimberly K.; Robbins, Lisa L.

    1999-01-01

    Microbial calcification significantly impacts the cycling and deposition of inorganic carbon. This research employs 45Ca and 14C techniques as radioisotopic tracers to examine the role of cellular cycling of Ca2+ and inorganic carbon in CaCO3 precipitation by the unicellular green alga Nannochloris atomus. Implications of the effects of these physiological aspects on CaCO3 precipitation and the effects of microbial calcification on CaCO3 δ13C ratios are discussed. Results from pulse/chase experiments indicate that intracellular Ca2+ is incorporated into extracellular CaCO3. Intracellular inorganic carbon leaks from cells within 10 to 12 s after injection of unlabelled NaHCO3, providing a source of inorganic carbon for extracellular CaCO3. Cellular expulsion of calcium plays a key role in increasing the CaCO3 saturation state at the site of calcification. The δ13C ratios of microbial carbonates may vary depending on the amount of photorespiratory CO2 incorporated.

  19. Multiyear precipitation reduction strongly decreases carbon uptake over northern China

    NASA Astrophysics Data System (ADS)

    Yuan, Wenping; Liu, Dan; Dong, Wenjie; Liu, Shuguang; Zhou, Guangsheng; Yu, Guirui; Zhao, Tianbao; Feng, Jinming; Ma, Zhuguo; Chen, Jiquan; Chen, Yang; Chen, Shiping; Han, Shijie; Huang, Jianping; Li, Linghao; Liu, Huizhi; Liu, Shaoming; Ma, Mingguo; Wang, Yanfeng; Xia, Jiangzhou; Xu, Wenfang; Zhang, Qiang; Zhao, Xinquang; Zhao, Liang

    2014-05-01

    Drought has been a concern in global and regional water, carbon, and energy cycles. From 1999 to 2011, northern China experienced a multiyear precipitation reduction that significantly decreased water availability as indicated by the Palmer Drought Severity Index and soil moisture measurements. In this study, a light use efficiency model (EC-LUE) and an ecosystem physiological model (IBIS) were used to characterize the impacts of long-term drought on terrestrial carbon fluxes in northern China. EC-LUE and IBIS models showed the reduction of averaged GPP of 0.09 and 0.05 Pg C yr-1 during 1999-2011 compared with 1982-1998. Based on the IBIS model, simulated ecosystem respiration experienced an insignificant decrease from 1999 to 2011. The multiyear precipitation reduction changed the regional carbon uptake of 0.011 Pg C yr-1 from 1982 to 1998 to a net source of 0.018 Pg C yr-1 from 1999 to 2011. Moreover, a pronounced decrease in maize yield in almost all provinces in the study region was found from 1999 to 2011 versus the average of yield from1978 to 2011. The largest maize yield reduction occurred in Beijing (2499 kg ha-1 yr-1), Jilin (2180 kg ha-1 yr-1), Tianjing (1923 kg ha-1 yr-1), and Heilongjiang (1791 kg ha-1 yr-1), and the maize yield anomaly was significantly correlated with the annual precipitation over the entire study area. Our results revealed that recent climate change, especially drought-induced water stress, is the dominant cause of the reduction in the terrestrial carbon sink over northern China.

  20. Laboratory Exploration of Organic and Inorganic Carbon by Laser-induced Breakdown Spectroscopy (LIBS): Relevance for Planetary Astrobiology Missions

    NASA Astrophysics Data System (ADS)

    Blank, J. G.; Clegg, S. M.; Barefield, J. E.; McKay, C. P.; Wiens, R. C.

    2010-03-01

    We used LIBS and chemometric analysis to distinguish between organic and inorganic carbon in various samples (igneous rocks, carbonates, and kerogen-rich fertilizers), demonstrating the potential for ChemCam LIBS as an astrobiology tool for MSL.

  1. Urea Uptake and Carbon Fixation by Marine Pelagic Bacteria and Archaea during the Arctic Summer and Winter Seasons

    PubMed Central

    Connelly, Tara L.; Baer, Steven E.; Cooper, Joshua T.; Bronk, Deborah A.

    2014-01-01

    How Arctic climate change might translate into alterations of biogeochemical cycles of carbon (C) and nitrogen (N) with respect to inorganic and organic N utilization is not well understood. This study combined 15N uptake rate measurements for ammonium, nitrate, and urea with 15N- and 13C-based DNA stable-isotope probing (SIP). The objective was to identify active bacterial and archeal plankton and their role in N and C uptake during the Arctic summer and winter seasons. We hypothesized that bacteria and archaea would successfully compete for nitrate and urea during the Arctic winter but not during the summer, when phytoplankton dominate the uptake of these nitrogen sources. Samples were collected at a coastal station near Barrow, AK, during August and January. During both seasons, ammonium uptake rates were greater than those for nitrate or urea, and nitrate uptake rates remained lower than those for ammonium or urea. SIP experiments indicated a strong seasonal shift of bacterial and archaeal N utilization from ammonium during the summer to urea during the winter but did not support a similar seasonal pattern of nitrate utilization. Analysis of 16S rRNA gene sequences obtained from each SIP fraction implicated marine group I Crenarchaeota (MGIC) as well as Betaproteobacteria, Firmicutes, SAR11, and SAR324 in N uptake from urea during the winter. Similarly, 13C SIP data suggested dark carbon fixation for MGIC, as well as for several proteobacterial lineages and the Firmicutes. These data are consistent with urea-fueled nitrification by polar archaea and bacteria, which may be advantageous under dark conditions. PMID:25063662

  2. The influence of dissolved organic carbon on bacterial phosphorus uptake and bacteria-phytoplankton dynamics in two Minnesota lakes

    USGS Publications Warehouse

    Stets, E.G.; Cotner, J.B.

    2008-01-01

    The balance of production in any ecosystem is dependent on the flow of limiting nutrients into either the autotrophic or heterotrophic components of the food web. To understand one of the important controls on the flow of inorganic nutrients between phytoplankton and bacterioplankton in lakes, we manipulated dissolved organic carbon (DOC) in two lakes of different trophic status. We hypothesized that labile DOC additions would increase bacterial phosphorus (P) uptake and decrease the response of phytoplankton to nutrient additions. Supplemental nutrients and carbon (C), nitrogen (N, 1.6 ??mol NH4Cl L-1 d-1), P (0.1 ??mol KH 2PO4 L-1 d-1), and DOC (glucose, 15 ??mol C L-1 d-1) were added twice daily to 8-liter experimental units. We tested the effect of added DOC on chlorophyll concentration, bacterial production, biomass, and P uptake using size-fractionated 33P-PO4 uptake. In the oligotrophic lake, DOC additions stimulated bacterial production and increased bacterial biomass-specific P uptake. Bacteria consumed added DOC, and chlorophyll concentrations were significantly lower in carboys receiving DOC additions. In the eutrophic lake, DOC additions had less of a stimulatory effect on bacterial production and biomass-specific P uptake. DOC accumulated over the time period, and there was little evidence for a DOC-induced decrease in phytoplankton biomass. Bacterial growth approached the calculated ??max and yet did not accumulate biomass, indicating significant biomass losses, which may have constrained bacterial DOC consumption. Excess bacterial DOC consumption in oligotrophic lakes may result in greater bacterial P affinity and enhanced nutrient uptake by the heterotrophic compartment of the food web. On the other hand, constraints on bacterial biomass accumulation in eutrophic lakes, from either viral lysis or bacterial grazing, can allow labile DOC to accumulate, thereby negating the effect of excess DOC on the planktonic food web. ?? 2008, by the American

  3. Developing inorganic carbon-based radiocarbon chronologies for Holocene lake sediments in arid NW China

    NASA Astrophysics Data System (ADS)

    Zhang, Jiawu; Ma, Xueyang; Qiang, Mingrui; Huang, Xiaozhong; Li, Shuang; Guo, Xiaoyan; Henderson, Andrew C. G.; Holmes, Jonathan A.; Chen, Fahu

    2016-07-01

    Inorganic carbonates are often used to establish radiocarbon (14C) chronologies for lake sediments when terrestrial plant remains (TPR) are rare or when bulk organic matter is insufficient for dating, a problem that is common for many lakes in arid regions. However, the reservoir effect (RE), as well as old carbon contributed from the lakes catchment make it difficult to establish reliable chronologies. Here we present a systematic study of inorganic 14C ages of two lake-sediment sequences, one from a small-enclosed saline lake - Lake Gahai in Qaidam Basin, and the other from a large freshwater lake - Lake Bosten in Xinjiang. Modern dissolved inorganic carbon (DIC) of the lakes, paleo-lake sediments exposed in the catchment, and mollusk shells in core sediments from Lake Gahai were dated to assess the RE and the contribution of pre-aged carbon to the old ages in the cores. We propose a statistical regression to assess more than one RE for the 14C carbonate ages within our sedimentary sequences. Old radiocarbon ages contributed by detrital carbonates were assessed by comparing the ages of mollusk shells with those of carbonates at the same sediment depths. We established the RE of the authigenic component and assessed detrital old carbon contributions to our two sites, and this was used to correct the 14C ages. Based on this approach, we developed age models for both cores, and tested them using 210Pb ages in both cores and TPR-based 14C-ages recovered from Lake Bosten. We further tested our age models by comparing carbonate-based oxygen isotope (δ18O) records from both lakes to an independently-dated regional speleothem δ18O record. Our results suggest if sedimentary sequences are densely dated and the RE and the contribution of old carbon from detrital carbonates can be ascertained, robust chronological frameworks based on carbonate-based 14C determinations can be established.

  4. Interaction of carbon nanohorns with plants: Uptake and biological effects

    SciTech Connect

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; Puretzky, Alexander A.; Green, Micah J.; Khodakovskaya, Mariya V.

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmed by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.

  5. Interaction of carbon nanohorns with plants: Uptake and biological effects

    DOE PAGESBeta

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; Puretzky, Alexander A.; Green, Micah J.; Khodakovskaya, Mariya V.

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmedmore » by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.« less

  6. Highly selective and stable carbon dioxide uptake in polyindole-derived microporous carbon materials.

    PubMed

    Saleh, Muhammad; Tiwari, Jitendra N; Kemp, K Christain; Yousuf, Muhammad; Kim, Kwang S

    2013-05-21

    Adsorption with solid sorbents is considered to be one of the most promising methods for the capture of carbon dioxide (CO₂) from power plant flue gases. In this study, microporous carbon materials used for CO₂ capture were synthesized by the chemical activation of polyindole nanofibers (PIF) at temperatures from 500 to 800 °C using KOH, which resulted in nitrogen (N)-doped carbon materials. The N-doped carbon materials were found to be microporous with an optimal adsorption pore size for CO₂ of 0.6 nm and a maximum (Brunauer-Emmett-Teller) BET surface area of 1185 m(2) g(-1). The PIF activated at 600 °C (PIF6) has a surface area of 527 m(2) g(-1) and a maximum CO₂ storage capacity of 3.2 mmol g(-1) at 25 °C and 1 bar. This high CO₂ uptake is attributed to its highly microporous character and optimum N content. Additionally, PIF6 material displays a high CO₂ uptake at low pressure (1.81 mmol g(-1) at 0.2 bar and 25 °C), which is the best low pressure CO₂ uptake reported for carbon-based materials. The adsorption capacity of this material remained remarkably stable even after 10 cycles. The isosteric heat of adsorption was calculated to be in the range of 42.7-24.1 kJ mol(-1). Besides the excellent CO₂ uptake and stability, PIF6 also exhibits high selectivity values for CO₂ over N₂, CH₄, and H₂ of 58.9, 12.3, and 101.1 at 25 °C, respectively, and these values are significantly higher than reported values.

  7. THE EFFECT OF PH AND DISSOLVED INORGANIC CARBON ON THE PROPERTIES OF IRON COLLOIDAL SUSPENSIONS

    EPA Science Inventory

    Discolored water resulting from suspended iron particles is a relatively common drinking water consumer complaint. These particles result from the oxygenation of Fe(II), and this study shows that pH and dissolved inorganic carbon (DIC) have important effects on their properties....

  8. The influence of root assimilated inorganic carbon on nitrogen acquisition/assimilation and carbon partitioning.

    PubMed

    Viktor, A; Cramer, M D

    2005-01-01

    Understanding of the influences of root-zone CO2 concentration on nitrogen (N) metabolism is limited. The influences of root-zone CO2 concentration on growth, N uptake, N metabolism and the partitioning of root assimilated 14C were determined in tomato (Lycopersicon esculentum). Root, but not leaf, nitrate reductase activity was increased in plants supplied with increased root-zone CO2. Root phosphoenolpyruvate carboxylase activity was lower with NO3(-)- than with NH4(+)-nutrition, and in the latter, was also suppressed by increased root-zone CO2. Increased growth rate in NO3(-)-fed plants with elevated root-zone CO2 concentrations was associated with transfer of root-derived organic acids to the shoot and conversion to carbohydrates. With NH4(+)-fed plants, growth and total N were not altered by elevated root-zone CO2 concentrations, although 14C partitioning to amino acid synthesis was increased. Effects of root-zone CO2 concentration on N uptake and metabolism over longer periods (> 1 d) were probably limited by feedback inhibition. Root-derived organic acids contributed to the carbon budget of the leaves through decarboxylation of the organic acids and photosynthetic refixation of released CO2. PMID:15720630

  9. New insights into iron acquisition by cyanobacteria: an essential role for ExbB-ExbD complex in inorganic iron uptake

    PubMed Central

    Jiang, Hai-Bo; Lou, Wen-Jing; Ke, Wen-Ting; Song, Wei-Yu; Price, Neil M; Qiu, Bao-Sheng

    2015-01-01

    Cyanobacteria are globally important primary producers that have an exceptionally large iron requirement for photosynthesis. In many aquatic ecosystems, the levels of dissolved iron are so low and some of the chemical species so unreactive that growth of cyanobacteria is impaired. Pathways of iron uptake through cyanobacterial membranes are now being elucidated, but the molecular details are still largely unknown. Here we report that the non-siderophore-producing cyanobacterium Synechocystis sp. PCC 6803 contains three exbB-exbD gene clusters that are obligatorily required for growth and are involved in iron acquisition. The three exbB-exbDs are redundant, but single and double mutants have reduced rates of iron uptake compared with wild-type cells, and the triple mutant appeared to be lethal. Short-term measurements in chemically well-defined medium show that iron uptake by Synechocystis depends on inorganic iron (Fe′) concentration and ExbB-ExbD complexes are essentially required for the Fe′ transport process. Although transport of iron bound to a model siderophore, ferrioxamine B, is also reduced in the exbB-exbD mutants, the rate of uptake at similar total [Fe] is about 800-fold slower than Fe′, suggesting that hydroxamate siderophore iron uptake may be less ecologically relevant than free iron. These results provide the first evidence that ExbB-ExbD is involved in inorganic iron uptake and is an essential part of the iron acquisition pathway in cyanobacteria. The involvement of an ExbB-ExbD system for inorganic iron uptake may allow cyanobacteria to more tightly maintain iron homeostasis, particularly in variable environments where iron concentrations range from limiting to sufficient. PMID:25012898

  10. Parallel trends in organic and inorganic carbon isotopes across the Permian/Triassic boundary

    SciTech Connect

    Magaritz, M. ); Krishnamurthy, R.V. ); Holser, W.T. Cornell Univ., Ithaca, NY )

    1992-12-01

    Stable carbon isotope ratios in both inorganic and organic reservoirs have been widely applied to model environmental and sedimentological changes on a global scale. Most studies dealing with major extinction events have used the record of inorganic carbon. In this paper the authors report the relation between shifts in carbon-13 content of organic matter and coexisting carbonate fractions at a major extinction event, the Permian/Triassic boundary. They found that both [delta][sup 13]C[sub carb] and [delta][sup 13]C[sub org] of the surface ocean varied dramatically across the boundary, but the fractionation [Delta][sup 13]C between organic matter and carbonate remained constant. This result appreciably restricts the interpretation of changes in the carbon cycle during this critical interval. The new data are best explained by a combination of two mechanisms for variation in [delta][sup 13]C[sub carb]: (1) burial and erosion of organic carbon, with a long time constant; and (2) sequestration of organic carbon into shallow and deep oceanic reservoirs, with a shorter time constant. For application to their case, the first mechanism is limited by possible buildup of marine pCO[sub 2], which would increase the isotopic fractionation factor. The second mechanism is limited in application to short-term transient variations in [delta][sup 13]C. Modeling of the carbon cycle and its variations of [delta][sup 13]C must take both mechanisms into account.

  11. Apparent Disequilibrium of Inorganic and Organic Carbon Compounds in Serpentinizing Fluids

    NASA Astrophysics Data System (ADS)

    Robinson, K.; Shock, E.

    2014-12-01

    During serpentinization of ultramafic rocks, ferrous iron in silicates is oxidized to ferric minerals and H2O is reduced to H2. This process is accompanied by the reduction of inorganic carbon, as observed in experiments and natural systems. To test the extent to which stable and metastable equilibria are reached among aqueous organic compounds during serpentinization, we sampled water and dissolved gases from circumneutral surface pools and hyperalkaline seeps in the Samail ophiolite in the Sultanate of Oman and analyzed for various carbon constituents, including dissolved inorganic carbon, dissolved organic carbon, methane, carbon monoxide, formate, acetate, and other small organic acid anions. Measurements of temperature, pH, dissolved H2, O2, major cations, major anions, and major and trace elements were also made. The aqueous composition of the analyzed samples was speciated based on ionic equilibrium interactions in order to obtain activities for inorganic carbon species, reduced carbon species, H2, and O2. The redox disequilibria among carbon species was then assessed using data and parameters for the revised HKF equations of state. This analysis demonstrates that the carbon species in this system are out of equilibrium with respect to one another in ways that cannot be compensated by altering the abundance of the other constituents within analytical uncertainties. Specifically, there is too much formate and too little methane relative to stable and metastable equilibria. This result implies the following: 1) Methane and formate equilibrated in separate parts of the system, given that no reasonable temperature, pressure, or composition changes satisfy equilibrium with their measured abundances. 2) Methane production is kinetically inhibited, as seen in experiments. 3) Microbial methane oxidation altered the abundance of methane and formate; methane oxidation to formate or carbonate is calculated to be extremely thermodynamically favorable in these fluids.

  12. Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata

    PubMed Central

    Ponsard, Julie; Cambon-Bonavita, Marie-Anne; Zbinden, Magali; Lepoint, Gilles; Joassin, André; Corbari, Laure; Shillito, Bruce; Durand, Lucile; Cueff-Gauchard, Valérie; Compère, Philippe

    2013-01-01

    The shrimp Rimicaris exoculata dominates several hydrothermal vent ecosystems of the Mid-Atlantic Ridge and is thought to be a primary consumer harbouring a chemoautotrophic bacterial community in its gill chamber. The aim of the present study was to test current hypotheses concerning the epibiont's chemoautotrophy, and the mutualistic character of this association. In-vivo experiments were carried out in a pressurised aquarium with isotope-labelled inorganic carbon (NaH13CO3 and NaH14CO3) in the presence of two different electron donors (Na2S2O3 and Fe2+) and with radiolabelled organic compounds (14C-acetate and 3H-lysine) chosen as potential bacterial substrates and/or metabolic by-products in experiments mimicking transfer of small biomolecules from epibionts to host. The bacterial epibionts were found to assimilate inorganic carbon by chemoautotrophy, but many of them (thick filaments of epsilonproteobacteria) appeared versatile and able to switch between electron donors, including organic compounds (heterotrophic acetate and lysine uptake). At least some of them (thin filamentous gammaproteobacteria) also seem capable of internal energy storage that could supply chemosynthetic metabolism for hours under conditions of electron donor deprivation. As direct nutritional transfer from bacteria to host was detected, the association appears as true mutualism. Import of soluble bacterial products occurs by permeation across the gill chamber integument, rather than via the digestive tract. This first demonstration of such capabilities in a decapod crustacean supports the previously discarded hypothesis of transtegumental absorption of dissolved organic matter or carbon as a common nutritional pathway. PMID:22914596

  13. Understanding on Soil Inorganic Carbon Transformation in North China

    NASA Astrophysics Data System (ADS)

    Li, Guitong; Yang, Lifang; Zhang, Chenglei; Zhang, Hongjie

    2015-04-01

    Soil total carbon balance in long-term fertilization field experiments in North China Plain. Four long-term fertilization experiments (20-30 years) were investigated on SOC in 40 cm, calcium carbonate and active carbonate (AC) in 180 or 100 cm soil profile, δ13C values of SOC and δ13C and δ18O values of carbonate in soil profile, particle distribution of SOC and SIC in main soil layers, and ratios of pedogenic carbonate (PC) in SIC and C3-SOC in SOC. The most important conclusion is that fertilization of more than 20 years can produce detectable impact on pool size, profile distribution, ratio of active component and PC of SIC, which make it clear that SIC pool must be considered in the proper evaluation of the response of soil carbon balance to human activities in arid and semi-arid region. Land use impact on soil total carbon pool in Inner Mongolia. With the data of the second survey of soils in Inner Mongolia and the 58 soil profile data from Wu-lan-cha-bu-meng and Xi-lin-hao-te, combining with the 13C and 18O techniques, SIC density and stock in Inner Mongolia is estimated. The main conclusion is that soils in inner Mongolia have the same level of SOC and SIC, with the density in 100cm pedons of 8.97 kg•m-2 and 8.61 kg•m-2, respectively. Meanwhile, the significantly positive relationship between SOC and SIC in A layer indicates co-sequestration of SOC and SIC exist. Evaluation of the methods for measuring CA enzyme activity in soil. In laboratory, method in literature to measure CA activity in soil sample was repeated, and found it was not valid indeed. The failure could not attribute to the disturbance of common ions like NO3-, SO42-, Ca2+, and Mg2+. The adsorption of CA to soil material was testified as the main reason for that failure. A series of extractants were tested but no one can extract the adsorbed CA and be used in measuring CA activity in soil sample. Carbonate transformation in field with straw returned and biochar added. In 2009, a field

  14. Diversity of freshwater Epsilonproteobacteria and dark inorganic carbon fixation in the sulphidic redoxcline of a meromictic karstic lake.

    PubMed

    Noguerola, Imma; Picazo, Antonio; Llirós, Marc; Camacho, Antonio; Borrego, Carles M

    2015-07-01

    Sulfidic redoxclines are a suitable niche for the growth and activity of different chemo- and photolithotrophic sulphide-oxidizing microbial groups such as the Epsilonproteobacteria and the green sulfur bacteria (GSB). We have investigated the diversity, abundance and contribution to inorganic carbon uptake of Epsilonproteobacteria in a meromictic basin of Lake Banyoles. CARD-FISH counts revealed that Epsilonproteobacteria were prevalent at the redoxcline in winter (maximum abundance of 2 × 10(6) cells mL(-1), ≈60% of total cells) but they were nearly absent in summer, when GSB bloomed. This seasonal trend was supported by 16S rRNA gene pyrotag datasets, which revealed that the epsilonproteobacterial community was mainly composed of a member of the genus Arcobacter. In situ incubations using NaH(14)CO3 and MAR-CARD-FISH observations showed that this population assimilated CO2 in the dark, likely being mainly responsible for the autotrophic activity at the redoxcline in winter. Clone libraries targeting the aclB gene provided additional evidence of the potential capacity of these epsilonproteobacteria to fix carbon via rTCA cycle. Our data reinforce the key role of Epsilonproteobacteria in linking carbon and sulphur cycles, extend their influence to freshwater karstic lakes and raise questions about the actual contribution of chemolithotrophy at their redoxcline and euxinic water compartments.

  15. Can frequent precipitation moderate drought impact on peatmoss carbon uptake in northern peatlands?

    NASA Astrophysics Data System (ADS)

    Nijp, Jelmer; Limpens, Juul; Metselaar, Klaas; van der Zee, Sjoerd; Berendse, Frank; Robroek, Bjorn

    2014-05-01

    Northern peatlands represent one of the largest global carbon stores that can potentially be released by water table drawdown during extreme summer droughts. Small precipitation events may moderate negative impacts of deep water levels on carbon uptake by sustaining photosynthesis of peatmoss (Sphagnum spp.), the key species in these ecosystems. We experimentally assessed the importance of the temporal distribution of precipitation for Sphagnum water supply and carbon uptake during a stepwise decrease in water levels in a growth chamber. CO2 exchange and the water balance were measured for intact cores of three peatmoss species representative of three contrasting habitats in northern peatlands (Sphagnum fuscum, S. balticum and S. majus). For shallow water levels, capillary rise was the most important source of water for peatmoss photosynthesis and precipitation did not promote carbon uptake irrespective of peatmoss species. For deep water levels, however, precipitation dominated over capillary rise and moderated adverse effects of drought on carbon uptake by peat mosses. The ability to use the transient water supply by precipitation was species-specific: carbon uptake of S. fuscum increased linearly with precipitation frequency for deep water levels, whereas S. balticum and S. majus showed depressed carbon uptake at intermediate precipitation frequencies. Our results highlight the importance of precipitation for carbon uptake by peatmosses. The potential of precipitation to moderate drought impact, however, is species specific and depends on the temporal distribution of precipitation and water level. These results also suggest that modelling approaches in which water level depth is used as the only state variable determining water availability in the living moss layer and (in)directly linked to Sphagnum carbon uptake may have serious drawbacks. The predictive power of peatland ecosystem models may be reduced when deep water levels prevail, as precipitation

  16. Dissolved inorganic carbon and alkalinity fluxes from coastal marine sediments: model estimates for different shelf environments and sensitivity to global change

    NASA Astrophysics Data System (ADS)

    Krumins, V.; Gehlen, M.; Arndt, S.; van Cappellen, P.; Regnier, P.

    2012-07-01

    We present a one-dimensional reactive transport model to estimate benthic fluxes of dissolved inorganic carbon (DIC) and alkalinity (AT) from coastal marine sediments. The model incorporates the transport processes of sediment accumulation, molecular diffusion, bioturbation and bioirrigation, while the reactions included are the redox pathways of organic carbon oxidation, re-oxidation of reduced nitrogen, iron and sulfur compounds, pore water acid-base equilibria, and dissolution of particulate inorganic carbon (calcite, aragonite, and Mg-calcite). The coastal zone is divided into four environmental units with different particulate inorganic carbon (PIC) and particulate organic carbon (POC) fluxes: reefs, banks and bays, carbonate shelves and non-carbonate shelves. Model results are analyzed separately for each environment and then scaled up to the whole coastal ocean. The model-derived estimate for the present-day global coastal benthic DIC efflux is 126 Tmol yr-1, based on a global coastal reactive POC depositional flux of 117 Tmol yr-1. The POC decomposition leads to a~carbonate dissolution from shallow marine sediments of 7 Tmol yr-1 (on the order of 0.1 Pg C yr-1). Assuming complete re-oxidation of aqueous sulfide released from sediments, the effective net flux of alkalinity to the water column is 29 Teq yr-1, primarily from PIC dissolution (46%) and ammonification (33%). Because our POC depositional flux falls in the high range of global values given in the literature, the reported DIC and alkalinity fluxes should be viewed as upper-bound estimates. Increasing coastal seawater DIC to what might be expected in year 2100 due to the uptake of anthropogenic CO2 increases PIC dissolution by 2.3 Tmol yr-1 and alkalinity efflux by 4.8 Teq yr-1. Our reactive transport modeling approach not only yields global estimates of benthic DIC, alkalinity and nutrient fluxes under variable scenarios of ocean productivity and chemistry, but also provides insights into the

  17. Dissolved inorganic carbon and alkalinity fluxes from coastal marine sediments: model estimates for different shelf environments and sensitivity to global change

    NASA Astrophysics Data System (ADS)

    Krumins, V.; Gehlen, M.; Arndt, S.; Van Cappellen, P.; Regnier, P.

    2013-01-01

    We present a one-dimensional reactive transport model to estimate benthic fluxes of dissolved inorganic carbon (DIC) and alkalinity (AT) from coastal marine sediments. The model incorporates the transport processes of sediment accumulation, molecular diffusion, bioturbation and bioirrigation, while the reactions included are the redox pathways of organic carbon oxidation, re-oxidation of reduced nitrogen, iron and sulfur compounds, pore water acid-base equilibria, and dissolution of particulate inorganic carbon (calcite, aragonite, and Mg-calcite). The coastal zone is divided into four environmental units with different particulate inorganic carbon (PIC) and particulate organic carbon (POC) fluxes: reefs, banks and bays, carbonate shelves and non-carbonate shelves. Model results are analyzed separately for each environment and then scaled up to the whole coastal ocean. The model-derived estimate for the present-day global coastal benthic DIC efflux is 126 Tmol yr-1, based on a global coastal reactive POC depositional flux of 117 Tmol yr-1. The POC decomposition leads to a carbonate dissolution from shallow marine sediments of 7 Tmol yr-1 (on the order of 0.1 Pg C yr-1. Assuming complete re-oxidation of aqueous sulfide released from sediments, the effective net flux of alkalinity to the water column is 29 Teq. yr-1, primarily from PIC dissolution (46%) and ammonification (33%). Because our POC depositional flux falls in the high range of global values given in the literature, the reported DIC and alkalinity fluxes should be viewed as upper-bound estimates. Increasing coastal seawater DIC to what might be expected in year 2100 due to the uptake of anthropogenic CO2 increases PIC dissolution by 2.3 Tmol yr-1and alkalinity efflux by 4.8 Teq. yr-1. Our reactive transport modeling approach not only yields global estimates of benthic DIC, alkalinity and nutrient fluxes under variable scenarios of ocean productivity and chemistry, but also provides insights into the

  18. Multiwalled carbon nanotubes in alfalfa and wheat: toxicology and uptake

    PubMed Central

    Miralles, Pola; Johnson, Errin; Church, Tamara L.; Harris, Andrew T.

    2012-01-01

    Data on the bioavailability and toxicity of carbon nanotubes (CNTs) in the environment, and, in particular, on their interactions with vascular plants, are limited. We investigated the effects of industrial-grade multiwalled CNTs (75 wt% CNTs) and their impurities on alfalfa and wheat. Phytotoxicity assays were performed during both seed germination and seedling growth. The germinations of both species were tolerant of up to 2560 mg l−1 CNTs, and root elongation was enhanced in alfalfa and wheat seedlings exposed to CNTs. Remarkably, catalyst impurities also enhanced root elongation in alfalfa seedlings as well as wheat germination. Thus the impurities, not solely the CNTs, impacted the plants. CNT internalization by plants was investigated using electron microscopy and two-dimensional Raman mapping. The latter showed that CNTs were adsorbed onto the root surfaces of alfalfa and wheat without significant uptake or translocation. Electron microscopy investigations of internalization were inconclusive owing to poor contrast, so Fe3O4-functionalized CNTs were prepared and studied using energy-filter mapping of Fe3O4. CNTs bearing Fe3O4 nanoparticles were detected in the epidermis of one wheat root tip only, suggesting that internalization was possible but unusual. Thus, alfalfa and wheat tolerated high concentrations of industrial-grade multiwalled CNTs, which adsorbed onto their roots but were rarely taken up. PMID:22977097

  19. Calcium Carbonate Formation by Genetically Engineered Inorganic Binding Peptides

    NASA Astrophysics Data System (ADS)

    Gresswell, Carolyn Gayle

    Understanding how organisms are capable of forming (synthesize, crystallize, and organize) solid minerals into complex architectures has been a fundamental question of biomimetic materials chemistry and biomineralization for decades. This study utilizes short peptides selected using a cell surface display library for the specific polymorphs of calcium carbonate, i.e., aragonite and calcite, to identify two sets of sequences which can then be used to examine their effects in the formation, crystal structure, morphology of the CaCO3 minerals. A procedure of counter selection, along with fluorescence microscopy (FM) characterization, was adapted to insure that the sequences on the cells were specific to their respective substrate, i.e., aragonite or calcite. From the resulting two sets of sequences selected, five distinct strong binders were identified with a variety of biochemical characteristics and synthesized for further study. Protein derived peptides, using the known sequences of the proteins that are associated with calcite or aragonite, were also designed using a bioinformatics-based similarity analysis of the two sets of binders. In particular, an aragonite binding protein segment, AP7, a protein found in nacre, was chosen for this design and the resulting effects of the designed peptides and the AP7 were examined. Specifically, the binding affinities of the selected and the protein derived peptides off the cells were then tested using FM; these studies resulted in different binding characteristics of the synthesized and cellular bound peptides. Two of the peptides that displayed strong binding on the cells bound to neither of the CaCO 3 substrates and both the high and low similarity protein-derived peptides bound to both polymorphs. However, two of the peptides were found to only bind to their respective polymorph showing; these results are significant in that with this study it is demonstrated that the designed peptides based on experimental library

  20. Carbon uptake sensitivity of the North Atlantic to climate change: A model study with the Bergen Climate Model

    NASA Astrophysics Data System (ADS)

    Goris, Nadine; Heinze, Christoph; Tjiputra, Jerry; Schwinger, Jörg

    2015-04-01

    mostly the subtropical gyre). The uptake reduction takes place mainly in the SPG-region accounting for 64.67% of the uptake differences in the North Atlantic. Further analysis shows that the changing CO2-flux in both SPG- and rNAT*-region is driven by an increasing oceanic pCO2, but the underlying mechanisms differ substantially. The pCO2-changes in the rNAT*-region are dominated by physical processes, that is increasing sea surface temperatures and a reduced freshwater flux. The latter processes are only of secondary importance for the pCO2 changes in the SPG-region, which are driven by reduced surface concentrations of dissolved inorganic carbon (DIC) and alkalinity. While the DIC concentration is reduced due to a decreasing DIC-transport into the SPG-region and a reduced carbon flux (both processes are counteracted by a declining biological production), the alkalinity concentration is reduced by the decreasing biological production (counteracted by a declining alkalinity-transport out of the SPG-region). The modeled interaction of deep convection (downwelling), high biological production, and surface circulation create the high climate sensitivity of carbon uptake in the SPG-region.

  1. Organic aerosol formation from the reactive uptake of isoprene epoxydiols (IEPOX) onto non-acidified inorganic seeds

    NASA Astrophysics Data System (ADS)

    Nguyen, T. B.; Coggon, M. M.; Bates, K. H.; Zhang, X.; Schwantes, R. H.; Schilling, K. A.; Loza, C. L.; Flagan, R. C.; Wennberg, P. O.; Seinfeld, J. H.

    2014-04-01

    The reactive partitioning of cis and trans β-IEPOX was investigated on hydrated inorganic seed particles, without the addition of acids. No organic aerosol (OA) formation was observed on dry ammonium sulfate (AS); however, prompt and efficient OA growth was observed for the cis and trans β-IEPOX on AS seeds at liquid water contents of 40-75% of the total particle mass. OA formation from IEPOX is a kinetically limited process, thus the OA growth continues if there is a reservoir of gas-phase IEPOX. There appears to be no differences, within error, in the OA growth or composition attributable to the cis / trans isomeric structures. Reactive uptake of IEPOX onto hydrated AS seeds with added base (NaOH) also produced high OA loadings, suggesting the pH dependence for OA formation from IEPOX is weak for AS particles. No OA formation, after particle drying, was observed on seed particles where Na+ was substituted for NH4+. The Henry's Law partitioning of IEPOX was measured on NaCl particles (ionic strength ~9 M) to be 3 × 107 M atm-1 (-50 / +100%). A small quantity of OA was produced when NH4+ was present in the particles, but the chloride (Cl-) anion was substituted for sulfate (SO42-), possibly suggesting differences in nucleophilic strength of the anions. Online time-of-flight aerosol mass spectrometry and offline filter analysis provide evidence of oxygenated hydrocarbons, organosulfates, and amines in the particle organic composition. The results are consistent with weak correlations between IEPOX-derived OA and particle acidity or liquid water observed in field studies, as the chemical system is nucleophile-limited and not limited in water or catalyst activity.

  2. Modelling carbon isotope composition of dissolved inorganic carbon and methane in marine porewaters

    NASA Astrophysics Data System (ADS)

    Meister, Patrick; Liu, Bo; Khalili, Arzhang; Barker Jørgensen, Bo

    2014-05-01

    Carbon isotope compositions of dissolved inorganic carbon (DIC) and methane (CH4) in marine sedimentary porewaters at near surface temperatures show extremely large variation in apparent fractionation covering a range from -100 ‰ to +30 ‰. This fractionation is essentially the result of microbial activity, but the mechanisms and factors controlling this fractionation are still incompletely understood. This study provides a reaction transport model approach to evaluate the effects of the most important processes and factors on carbon isotope distribution with the goal to better understand carbon isotope distribution in modern sediment porewaters and in the geological record. Our model results show that kinetic fractionation during methanogenesis, both through the acetoclastic and autotrophic pathways, results in a nearly symmetrical distribution of δ13C values in DIC and CH4 with respect to the isotope value of buried organic matter. An increased fractionation factor during methanogenesis leads to a larger difference between δ13CDIC and δ13CCH4. Near the sulphate methane transition zone, DIC is more depleted in 13C due to diffusive mixing with DIC produced by anaerobic oxidation of methane (AOM) and organoclastic sulphate reduction. The model also shows that an upward decrease in δ13CCH4 near the SMT can only be caused by equilibrium fractionation during AOM including a backward "leakage" of carbon from DIC to CH4 through the enzymatic pathway. However, this effect of reversibility has no influence on the DIC pool as long as methane is completely consumed at the SMT. Only a release of methane at the sediment-water interface, due to a fraction of the methane escaping re-oxidation, results in a small shift towards more positive δ13CDIC values. Methane escape at the SMT is possible if either the methane flux is too high to be entirely oxidized by AOM, or if bubbles of methane gas by-pass the sulphate reduction zone and escape episodically into the water column

  3. Sources of dissolved inorganic carbon to the Canada Basin halocline: A multitracer study

    NASA Astrophysics Data System (ADS)

    Brown, Kristina A.; McLaughlin, Fiona; Tortell, Philippe D.; Yamamoto-Kawai, Michiyo; Francois, Roger

    2016-05-01

    We examine the dissolved inorganic carbon maximum in the Canada Basin halocline using a suite of geochemical tracers to gain insight into the factors that contribute to the persistence of this feature. Hydrographic and geochemical samples were collected in the upper 500 m of the southwestern Canada Basin water column in the summer of 2008 and fall of 2009. These observations were used to identify conservative and nonconservative processes that contribute dissolved inorganic carbon to halocline source waters, including shelf sediment organic matter remineralization, air-sea gas exchange, and sea-ice brine export. Our results indicate that the remineralization of organic matter that occurs along the Bering and Chukchi Sea shelves is the overwhelming contributor of dissolved inorganic carbon to Pacific Winter Water that occupies the middle halocline in the southwestern Canada Basin. Nonconservative contributions from air-sea exchange and sea-ice brine are not significant. The broad salinity range associated with the DIC maximum, compared to the narrow salinity range of the nutrient maximum, is due to mixing between Pacific and Atlantic water and not abiotic addition of DIC.

  4. CONTINUOUS, AUTOMATED AND SIMULTANEOUS MEASUREMENT OF OXYGEN UPTAKE AND CARBON DIOXIDE EVOLUTION IN BIOLOGICAL SYSTEMS

    EPA Science Inventory

    Commercial respirometers are capable of continuously and automatically measuring oxygen uptake in bioreactors. A method for continuously and automatically measuring carbon dioxide evolution can be retrofitted to commercial respirometers. Continuous and automatic measurements of...

  5. Carbon Isotope Composition of Caribbean Sea Surface Waters: Response to the Uptake of Anthropogenic CO2

    NASA Astrophysics Data System (ADS)

    Black, D. E.; Thunell, R.; Wejnert, K. E.; Astor, Y.

    2011-12-01

    The burning of fossil fuels and deforestation have significantly increased atmospheric CO2 levels, from ~280 ppm prior to the industrial revolution to the present value of ~390 ppm. Suess (1955) was the first to show that the carbon isotopic composition of the atmosphere is changing in response to the anthropogenic input of radiocarbon-dead, 13C depleted CO2 from fossil fuel combustion. While biological processes may be the primary mechanism controlling the δ13C of marine carbon, air-sea gas exchange should allow for the transfer of the so-called 13C Suess effect (Keeling, 1979) from the atmosphere to the surface ocean. The first measurements of the δ13C of dissolved inorganic carbon of ocean surface waters were made in 1970 (Kroopnick, 1974) and serve as a baseline for assessing how the carbon isotopic composition of the oceans have changed in response to the invasion of fossil fuel CO2 over the last 40 years. However, in order to gain a longer and more complete picture of the marine δ13C Suess effect, we must rely on indirect measures of changes in surface water δ13C, most notably those preserved in carbonate secreting marine organisms. The Cariaco Basin is one of the rare locations where one can directly compare sediment records with modern instrumental data. Here we report a high resolution planktonic foraminiferal δ13C record from the basin for the last 300 years that clearly resolves the timing and magnitude of the marine 13C Suess effect associated with the oceanic uptake of anthropogenically derived CO2. Cariaco Basin sediment trap and upper-most box core sediment δ13C match both the trend and magnitude of observed δ13C changes in atmospheric CO2 over the last 15 years. The longer sediment record suggests the marine Suess effect to be -0.75 % from pre-industrial values, with most of the change occurring since 1950, coincident with the rapid rise in atmospheric CO2 noted in ice core and instrumental data. If the current anthropogenic CO2 emission

  6. Storage/Turnover rate of inorganic carbon and its dissolvable part in the profile of saline/alkaline soils.

    PubMed

    Wang, Yugang; Wang, Zhongyuan; Li, Yan

    2013-01-01

    Soil inorganic carbon is the most common form of carbon in arid and semiarid regions, and has a very long turnover time. However, little is known about dissolved inorganic carbon storage and its turnover time in these soils. With 81 soil samples taken from 6 profiles in the southern Gurbantongute Desert, China, we investigated the soil inorganic carbon (SIC) and the soil dissolved inorganic carbon (SDIC) in whole profiles of saline and alkaline soils by analyzing their contents and ages with radiocarbon dating. The results showed that there is considerable SDIC content in SIC, and the variations of SDIC and SIC contents in the saline soil profile were much larger than that in the alkaline profile. SDIC storage accounted for more than 20% of SIC storage, indicating that more than 1/5 of the inorganic carbon in both saline and alkaline soil is not in non-leachable forms. Deep layer soil contains considerable inorganic carbon, with more than 80% of the soil carbon stored below 1 m, whether for SDIC or SIC. More importantly, SDIC ages were much younger than SIC in both saline soil and alkaline soil. The input rate of SDIC and SIC ranged from 7.58 to 29.54 g C m(-2) yr(-1) and 1.34 to 5.33 g C m(-2) yr(-1) respectively for saline soil, and from 1.43 to 4.9 g C m(-2) yr(-1) and 0.79 to 1.27 g C m(-2) yr(-1)respectively for alkaline soil. The comparison of SDIC and SIC residence time showed that using soil inorganic carbon to estimate soil carbon turnover would obscure an important fraction that contributes to the modern carbon cycle: namely the shorter residence and higher input rate of SDIC. This is especially true for SDIC in deep layers of the soil profile.

  7. Storage/Turnover Rate of Inorganic Carbon and Its Dissolvable Part in the Profile of Saline/Alkaline Soils

    PubMed Central

    Wang, Yugang; Wang, Zhongyuan; Li, Yan

    2013-01-01

    Soil inorganic carbon is the most common form of carbon in arid and semiarid regions, and has a very long turnover time. However, little is known about dissolved inorganic carbon storage and its turnover time in these soils. With 81 soil samples taken from 6 profiles in the southern Gurbantongute Desert, China, we investigated the soil inorganic carbon (SIC) and the soil dissolved inorganic carbon (SDIC) in whole profiles of saline and alkaline soils by analyzing their contents and ages with radiocarbon dating. The results showed that there is considerable SDIC content in SIC, and the variations of SDIC and SIC contents in the saline soil profile were much larger than that in the alkaline profile. SDIC storage accounted for more than 20% of SIC storage, indicating that more than 1/5 of the inorganic carbon in both saline and alkaline soil is not in non-leachable forms. Deep layer soil contains considerable inorganic carbon, with more than 80% of the soil carbon stored below 1 m, whether for SDIC or SIC. More importantly, SDIC ages were much younger than SIC in both saline soil and alkaline soil. The input rate of SDIC and SIC ranged from 7.58 to 29.54 g C m-2 yr-1 and 1.34 to 5.33 g C m-2 yr-1 respectively for saline soil, and from 1.43 to 4.9 g C m-2 yr-1 and 0.79 to 1.27 g C m-2 yr-1respectively for alkaline soil. The comparison of SDIC and SIC residence time showed that using soil inorganic carbon to estimate soil carbon turnover would obscure an important fraction that contributes to the modern carbon cycle: namely the shorter residence and higher input rate of SDIC. This is especially true for SDIC in deep layers of the soil profile. PMID:24312399

  8. Watershed scale spatial variability in dissolved and total organic and inorganic carbon in contrasting UK catchments

    NASA Astrophysics Data System (ADS)

    Cumberland, S.; Baker, A.; Hudson, N. J.

    2006-12-01

    Approximately 800 organic and inorganic carbon analyses have been undertaken from watershed scale and regional scale spatial surveys in various British catchments. These include (1) a small (<100 sq-km) urban catchment (Ouseburn, N England); (2) a headwater, lowland agricultural catchment (River Tern, C England) (3) a large UK catchment (River Tyne, ~3000 sq-km) and (4) a spatial survey of ~300 analyses from rivers from SW England (~1700 sq-km). Results demonstrate that: (1) the majority of organic and inorganic carbon is in the dissolved (DOC and DIC) fractions; (2) that with the exception of peat rich headwaters, DIC concentration is always greater than DOC; (3) In the rural River Tern, riverine DOC and DIC are shown to follow a simple end- member mixing between DIC (DOC) rich (poor) ground waters and DOC (DIC) rich (poor) riparian wetlands for all sample sites. (4) In the urbanized Ouseburn catchment, although many sample sites also show this same mixing trend, some tributaries follow a pollutant trend of simultaneous increases in both DOC and DIC. The Ouseburn is part of the larger Tyne catchment: this larger catchment follows the simple groundwater DIC- soil water DOC end member mixing model, with the exception of the urban catchments which exhibit an elevated DIC compared to rural sites. (5) Urbanization is demonstrated to increase DIC compared to equivalent rural catchments; this DIC has potential sources including diffuse source inputs from the dissolution of concrete, point sources such as trade effluents and landfill leachates, and bedrock derived carbonates relocated to the soil dissolution zone by urban development. (6) DIC in rural SW England demonstrates that spatial variability in DIC can be attributed to variations in geology; but that DIC concentrations in the SW England rivers dataset are typically lower than the urbanized Tyne catchments despite the presence of carbonate bedrock in many of the sample catchments in the SW England dataset. (7

  9. Thermochemical chlorination of carbon indirectly driven by an unexpected sulfide of copper with inorganic chloride.

    PubMed

    Fujimori, Takashi; Takaoka, Masaki

    2011-12-15

    Unintentional anthropogenic thermal chlorination of carbon is known to be a contributor to global environmental pollution of organochlorine compounds. We found unexpected, serious chlorination of carbon promoted by a "sulfide" of copper, which has been generally thought of and studied as an inactive metal catalyst. Our quantitative and X-ray spectroscopic results show that a fraction of cupric sulfide indirectly promoted thermochemical solid-phase formation of a large quantity of organochlorine compounds such as polychlorinated dibenzo-p-dioxins, dibenzofurans, biphenyls, and benzenes that used inactive inorganic chloride as chlorine storage, which partly caused environmental pollution by organochlorine compounds. PMID:22004834

  10. Thermochemical chlorination of carbon indirectly driven by an unexpected sulfide of copper with inorganic chloride.

    PubMed

    Fujimori, Takashi; Takaoka, Masaki

    2011-12-15

    Unintentional anthropogenic thermal chlorination of carbon is known to be a contributor to global environmental pollution of organochlorine compounds. We found unexpected, serious chlorination of carbon promoted by a "sulfide" of copper, which has been generally thought of and studied as an inactive metal catalyst. Our quantitative and X-ray spectroscopic results show that a fraction of cupric sulfide indirectly promoted thermochemical solid-phase formation of a large quantity of organochlorine compounds such as polychlorinated dibenzo-p-dioxins, dibenzofurans, biphenyls, and benzenes that used inactive inorganic chloride as chlorine storage, which partly caused environmental pollution by organochlorine compounds.

  11. Net carbon uptake has increased through warming-induced changes in temperate forest phenology

    SciTech Connect

    Keenan, Trevor; Gray, Josh; Friedl, Mark; Toomey, Michael; Bohrer, Gil; Hollinger, David; Munger, J. William; OKeefe, John; Hans, Schmid; Wing, Ian; Yang, Bai; Richardson, Andrew D.

    2014-01-01

    The timing of phenological events exerts a strong control over ecosystem function and leads to multiple feedbacks to the climate system1. Phenology is inherently sensitive to temperature (though the exact sensitivity is disputed2) and recent warming is reported to have led to earlier spring, later autumn3,4 and increased vegetation activity5,6. Such greening could be expected to enhance ecosystem carbon uptake7,8, though reports also suggest decreased uptake for boreal forests4,9. Here we assess changes in phenology of temperate forests over the eastern US during the past two decades, and quantify the resulting changes in forest carbon storage. We combine long-term ground observations of phenology, satellite indices, and ecosystem-scale carbon dioxide flux measurements, along with 18 terrestrial biosphere models. We observe a strong trend of earlier spring and later autumn. In contrast to previous suggestions4,9 we show that carbon uptake through photosynthesis increased considerably more than carbon release through respiration for both an earlier spring and later autumn. The terrestrial biosphere models tested misrepresent the temperature sensitivity of phenology, and thus the effect on carbon uptake. Our analysis of the temperature-phenology-carbon coupling suggests a current and possible future enhancement of forest carbon uptake due to changes in phenology. This constitutes a negative feedback to climate change, and is serving to slow the rate of warming.

  12. Inorganic markers, carbonaceous components and stable carbon isotope from biomass burning aerosols in northeast China

    NASA Astrophysics Data System (ADS)

    Cao, F.; Zhang, Y.; Kawamura, K.

    2015-12-01

    To better characterize the sources of fine particulate matter (i.e. PM2.5) in Sanjiang Plain, Northeast China, aerosol chemical composition such total carbon (TC), organic carbon (OC), elemental carbon (EC), water-soluble organic carbon (WSOC), and inorganic ions were studied as well as stable carbon isotopic composition (δ13C) of TC. Intensively open biomass burning episodes were identified from late September to early October by satellite fire and aerosol optical depth maps. During the biomass burning episodes, concentrations of PM2.5, OC, EC, and WSOC increased by a factor of 4-12 compared to non-biomass-burning periods. Non-sea-salt potassium is strongly correlated with PM2.5, OC, EC and WSOC, suggesting an important contribution of biomass burning emission. The enrichment in both the non-sea-salt potassium and chlorine is significantly larger than other inorganic species, indicating that biomass burning aerosols in Sanjiang Plain is mostly fresh and less aged. In addition, WSOC to OC ratio is relatively lower compared to that reported in biomass burning aerosols in tropical regions, supporting that biomass burning aerosols in Sanjiang Plain is mostly primary and secondary organic aerosols is not significant. A lower average δ13C value (-26.2‰) is found for the biomass-burning aerosols, suggesting a dominant contribution from combustion of C3 plants in the studied region.

  13. Does Ocean Color Data Assimilation Improve Estimates of Global Ocean Inorganic Carbon?

    NASA Technical Reports Server (NTRS)

    Gregg, Watson

    2012-01-01

    Ocean color data assimilation has been shown to dramatically improve chlorophyll abundances and distributions globally and regionally in the oceans. Chlorophyll is a proxy for phytoplankton biomass (which is explicitly defined in a model), and is related to the inorganic carbon cycle through the interactions of the organic carbon (particulate and dissolved) and through primary production where inorganic carbon is directly taken out of the system. Does ocean color data assimilation, whose effects on estimates of chlorophyll are demonstrable, trickle through the simulated ocean carbon system to produce improved estimates of inorganic carbon? Our emphasis here is dissolved inorganic carbon, pC02, and the air-sea flux. We use a sequential data assimilation method that assimilates chlorophyll directly and indirectly changes nutrient concentrations in a multi-variate approach. The results are decidedly mixed. Dissolved organic carbon estimates from the assimilation model are not meaningfully different from free-run, or unassimilated results, and comparisons with in situ data are similar. pC02 estimates are generally worse after data assimilation, with global estimates diverging 6.4% from in situ data, while free-run estimates are only 4.7% higher. Basin correlations are, however, slightly improved: r increase from 0.78 to 0.79, and slope closer to unity at 0.94 compared to 0.86. In contrast, air-sea flux of C02 is noticeably improved after data assimilation. Global differences decline from -0.635 mol/m2/y (stronger model sink from the atmosphere) to -0.202 mol/m2/y. Basin correlations are slightly improved from r=O.77 to r=0.78, with slope closer to unity (from 0.93 to 0.99). The Equatorial Atlantic appears as a slight sink in the free-run, but is correctly represented as a moderate source in the assimilation model. However, the assimilation model shows the Antarctic to be a source, rather than a modest sink and the North Indian basin is represented incorrectly as a sink

  14. Oceanic Carbon Dioxide Uptake in a Model of Century-Scale Global Warming

    PubMed

    Sarmiento; Le Quéré C

    1996-11-22

    In a model of ocean-atmosphere interaction that excluded biological processes, the oceanic uptake of atmospheric carbon dioxide (CO2) was substantially reduced in scenarios involving global warming relative to control scenarios. The primary reason for the reduced uptake was the weakening or collapse of the ocean thermohaline circulation. Such a large reduction in this ocean uptake would have a major impact on the future growth rate of atmospheric CO2. Model simulations that include a simple representation of biological processes show a potentially large offsetting effect resulting from the downward flux of biogenic carbon. However, the magnitude of the offset is difficult to quantify with present knowledge.

  15. Oceanic Carbon Dioxide Uptake in a Model of Century-Scale Global Warming

    PubMed

    Sarmiento; Le Quéré C

    1996-11-22

    In a model of ocean-atmosphere interaction that excluded biological processes, the oceanic uptake of atmospheric carbon dioxide (CO2) was substantially reduced in scenarios involving global warming relative to control scenarios. The primary reason for the reduced uptake was the weakening or collapse of the ocean thermohaline circulation. Such a large reduction in this ocean uptake would have a major impact on the future growth rate of atmospheric CO2. Model simulations that include a simple representation of biological processes show a potentially large offsetting effect resulting from the downward flux of biogenic carbon. However, the magnitude of the offset is difficult to quantify with present knowledge. PMID:8910268

  16. Effects of inorganic carbon concentration on carbon formation, nitrate utilization, biomass and oil accumulation of Nannochloropsis oculata CS 179.

    PubMed

    Lin, Qiang; Gu, Na; Li, Gang; Lin, Junda; Huang, Liangmin; Tan, LingLing

    2012-05-01

    This investigation examined the effects of the inorganic carbon concentration (4, 0.8 and 0 g/L NaHCO(3)) on the carbon formation, nitrate utilization, growth and fatty acids compositions of Nannochloropsis oculata. The dissolved inorganic carbon (DIC) concentration in the three treatments decreased sharply during the first 6 days, and the percentage of dissolved organic carbon (DOC) (% of total organic carbon (TOC)) decreased with the depletion of the DIC. The NO(3)(-) assimilation of the algae was correlated with the DIC concentration. The algae in the highest DIC treatment had the highest specific grow rate (0.0843 d(-1)) (P<0.0001), and their biomass and fatty acid methyl esters (FAME) productivity were 84.00 and 9.69 mg/L/d, respectively (P<0.0001). Contents of C16 and C18 series (% of FAME) were high and the C16:0 increased with the decrease of C18:1 during the cultivation. The iodine value (IV) of the algae was low at the low DIC media. PMID:22386465

  17. Effects of inorganic carbon concentration on carbon formation, nitrate utilization, biomass and oil accumulation of Nannochloropsis oculata CS 179.

    PubMed

    Lin, Qiang; Gu, Na; Li, Gang; Lin, Junda; Huang, Liangmin; Tan, LingLing

    2012-05-01

    This investigation examined the effects of the inorganic carbon concentration (4, 0.8 and 0 g/L NaHCO(3)) on the carbon formation, nitrate utilization, growth and fatty acids compositions of Nannochloropsis oculata. The dissolved inorganic carbon (DIC) concentration in the three treatments decreased sharply during the first 6 days, and the percentage of dissolved organic carbon (DOC) (% of total organic carbon (TOC)) decreased with the depletion of the DIC. The NO(3)(-) assimilation of the algae was correlated with the DIC concentration. The algae in the highest DIC treatment had the highest specific grow rate (0.0843 d(-1)) (P<0.0001), and their biomass and fatty acid methyl esters (FAME) productivity were 84.00 and 9.69 mg/L/d, respectively (P<0.0001). Contents of C16 and C18 series (% of FAME) were high and the C16:0 increased with the decrease of C18:1 during the cultivation. The iodine value (IV) of the algae was low at the low DIC media.

  18. Increase in observed net carbon dioxide uptake by land and oceans during the past 50 years.

    PubMed

    Ballantyne, A P; Alden, C B; Miller, J B; Tans, P P; White, J W C

    2012-08-01

    One of the greatest sources of uncertainty for future climate predictions is the response of the global carbon cycle to climate change. Although approximately one-half of total CO(2) emissions is at present taken up by combined land and ocean carbon reservoirs, models predict a decline in future carbon uptake by these reservoirs, resulting in a positive carbon-climate feedback. Several recent studies suggest that rates of carbon uptake by the land and ocean have remained constant or declined in recent decades. Other work, however, has called into question the reported decline. Here we use global-scale atmospheric CO(2) measurements, CO(2) emission inventories and their full range of uncertainties to calculate changes in global CO(2) sources and sinks during the past 50 years. Our mass balance analysis shows that net global carbon uptake has increased significantly by about 0.05 billion tonnes of carbon per year and that global carbon uptake doubled, from 2.4 ± 0.8 to 5.0 ± 0.9 billion tonnes per year, between 1960 and 2010. Therefore, it is very unlikely that both land and ocean carbon sinks have decreased on a global scale. Since 1959, approximately 350 billion tonnes of carbon have been emitted by humans to the atmosphere, of which about 55 per cent has moved into the land and oceans. Thus, identifying the mechanisms and locations responsible for increasing global carbon uptake remains a critical challenge in constraining the modern global carbon budget and predicting future carbon-climate interactions.

  19. Increase in observed net carbon dioxide uptake by land and oceans during the past 50 years.

    PubMed

    Ballantyne, A P; Alden, C B; Miller, J B; Tans, P P; White, J W C

    2012-08-01

    One of the greatest sources of uncertainty for future climate predictions is the response of the global carbon cycle to climate change. Although approximately one-half of total CO(2) emissions is at present taken up by combined land and ocean carbon reservoirs, models predict a decline in future carbon uptake by these reservoirs, resulting in a positive carbon-climate feedback. Several recent studies suggest that rates of carbon uptake by the land and ocean have remained constant or declined in recent decades. Other work, however, has called into question the reported decline. Here we use global-scale atmospheric CO(2) measurements, CO(2) emission inventories and their full range of uncertainties to calculate changes in global CO(2) sources and sinks during the past 50 years. Our mass balance analysis shows that net global carbon uptake has increased significantly by about 0.05 billion tonnes of carbon per year and that global carbon uptake doubled, from 2.4 ± 0.8 to 5.0 ± 0.9 billion tonnes per year, between 1960 and 2010. Therefore, it is very unlikely that both land and ocean carbon sinks have decreased on a global scale. Since 1959, approximately 350 billion tonnes of carbon have been emitted by humans to the atmosphere, of which about 55 per cent has moved into the land and oceans. Thus, identifying the mechanisms and locations responsible for increasing global carbon uptake remains a critical challenge in constraining the modern global carbon budget and predicting future carbon-climate interactions. PMID:22859203

  20. Mathematical models of the uptake of carbon monoxide on hemoglobin at low carbon monoxide levels.

    PubMed Central

    Joumard, R; Chiron, M; Vidon, R; Maurin, M; Rouzioux, J M

    1981-01-01

    Coburn's differential equation for the uptake of carbon monoxide by hemoglobin and two particular types of solution of this equation were considered and the solutions verified for a group of healthy adults consisting of 73 nonsmoking pedestrians or car passengers exposed to low levels of carbon monoxide as experienced in the city of Lyon. The CO levels at the breathing level and the walking speed of the subjects was continually measured, and the carboxyhemoglobin levels determined at the beginning and the end of each test journey. The values of all the other relevant parameters were also determined. The half-life of carboxyhemoglobin was studied as a function of the degree of activity, the age, the sex and the height of the subjects. Finally a mathematical model was set up to represent a periodic uptake of CO which made it possible to estimate the variations in the carboxyhemoglobin level for any subject during a period of a day or a week without any need to know the initial level. PMID:7333242

  1. Rapid carbon-carbon bond formation and cleavage revealed by carbon isotope exchange between the carboxyl carbon and inorganic carbon in hydrothermal fluids

    NASA Astrophysics Data System (ADS)

    Glein, C. R.; Cody, G. D.

    2013-12-01

    The carbon isotopic composition of organic compounds in water-rock systems (e.g., hydrothermal vents, sedimentary basins, and carbonaceous meteorites) is generally interpreted in terms of the isotopic composition of the sources of such molecules, and the kinetic isotope effects of metabolic or abiotic reactions that generate or transform such molecules. This hinges on the expectation that the carbon isotopic composition of many organic compounds is conserved under geochemical conditions. This expectation is reasonable in light of the strength of carbon-carbon bonds (ca. 81 kcal/mol); in general, environmental conditions conducive to carbon-carbon bond cleavage typically lead to transformations of organic molecules (decarboxylation is a notable example). Geochemically relevant reactions that involve isotopic exchange between carbon atoms in organic molecules and inorganic forms of carbon with no change in molecular structure appear to be rare. Notwithstanding such rarity, there have been preliminary reports of relatively rapid carbon isotope exchange between the carboxyl group in carboxylic acids and carbon dioxide in hot water [1,2]. We have performed laboratory hydrothermal experiments to gain insights into the mechanism of this surprising reaction, using phenylacetate as a model structure. By mass spectrometry, we confirm that the carboxyl carbon undergoes facile isotopic exchange with 13C-labeled bicarbonate at moderate temperatures (i.e., 230 C). Detailed kinetic analysis reveals that the reaction rate is proportional to the concentrations of both reactants. Further experiments demonstrate that the exchange reaction only occurs if the carbon atom adjacent to the carboxyl carbon is bonded to a hydrogen atom. As an example, no carbon isotope exchange was observed for benzoate in experiments lasting up to one month. The requirement of an alpha C-H bond suggests that enolization (i.e., deprotonation of the H) is a critical step in the mechanism of the exchange

  2. The Significance of Methane Carbon to Bulk Sedimentary Organic and Inorganic Carbon Pools Across the Porangahau Ridge, New Zealand

    NASA Astrophysics Data System (ADS)

    Coffin, R. B.; Hamdan, L. J.; Plummer, R. E.; Henrys, S.; Pecher, I.

    2008-12-01

    Sediment and pore water geochemistry was studied along a ~7km transect across the Porangahau Ridge located on the northeastern coast of New Zealand. Trends in methane, sulfate, dissolved and total inorganic carbon (DIC and TIC), and total organic carbon (TOC) concentration and stable carbon isotope ratios (δ13C) of methane, DIC, TIC and TOC were compared at 12 locations. Piston core samples were taken on, and landward and seaward of the ridge. At the landward base of the ridge, elevated methane concentration at anomalously shallow depths was observed. This observation coincided with geophysical indicators (seismic, heatflow) of upward migrating fluids, possibly associated with dissociating methane hydrates escaping to surface sediments at this location. Across the transect, methane δ13C ranged from -107.9‰ to -44.3‰. Minimum values were observed in cores on the landward flank of the ridge (average -80.7‰). Given the distinctly 13C-depleted signature of methane in high concentration samples, methane δ13C was used to track in situ oxidation and ultimate incorporation of methane into bulk organic (TOC) and inorganic (DIC and TIC) carbon pools. DIC δ13C and TIC δ13C nearest to the landward base of the ridge averaged -28.7‰ and -6.4‰ respectively. These averages are substantially 13C-depleted compared to the whole transect average (-19.7‰ and 0.47‰ respectively) indicating that methane carbon contributed significantly to the inorganic carbon pool at this location. 13C-depleted DIC likely resulted from in situ methane oxidation and precipitation of authigenic carbonates likely explains the appearance of 13C- depleted TIC at this location. Although TOC concentration was elevated on the seaward side of the ridge, average TOC δ13C (-23.0‰) was 13C-depleted in proximity to the landward flank of the ridge compared to the whole transect average (-21.9‰). These data suggest that there is a large degree of heterogeneity in the supply of methane to surface

  3. Spatial sensitivity of inorganic carbon to model setup: North Sea and Baltic Sea with ECOSMO

    NASA Astrophysics Data System (ADS)

    Castano Primo, Rocio; Schrum, Corinna; Daewel, Ute

    2015-04-01

    In ocean biogeochemical models it is critical to capture the key processes adequately so they do not only reproduce the observations but that those processes are reproduced correctly. One key issue is the choice of parameters, which in most cases are estimates with large uncertainties. This can be the product of actual lack of detailed knowledge of the process, or the manner the processes are implemented, more or less complex. In addition, the model sensitivity is not necessarily homogenous across the spatial domain modelled, which adds another layer of complexity to biogeochemical modelling. In the particular case of the inorganic carbon cycle, there are several sets of carbonate constants that can be chosen. The calculated air-sea CO2 flux is largely dependent on the parametrization chosen. In addition, the different parametrizations all the underlying processes that in some way impact the carbon cycle beyond the carbonate dissociation and fluxes give results that can be significantly different. Examples of these processes are phytoplankton growth rates or remineralization rates. Despite their geographical proximity, the North and Baltic Seas exhibit very different dynamics. The North Sea receives important inflows of Atlantic waters, while the Baltic Sea is an almost enclosed system, with very little exchange from the North Sea. Wind, tides, and freshwater supply act very differently, but dominantly structure the ecosystem dynamics on spatial and temporal scales. The biological community is also different. Cyanobacteria, which are important due to their ability to fix atmospheric nitrogen, and they are only present in the Baltic Sea. These differentiating features have a strong impact in the biogeochemical cycles and ultimately shape the variations in the carbonate chemistry. Here the ECOSMO model was employed on the North Sea and Baltic Sea. The model is set so both are modelled at the same time, instead of having them run separately. ECOSMO is a 3-D coupled

  4. Activation and splitting of carbon dioxide on the surface of an inorganic electride material.

    PubMed

    Toda, Yoshitake; Hirayama, Hiroyuki; Kuganathan, Navaratnarajah; Torrisi, Antonio; Sushko, Peter V; Hosono, Hideo

    2013-01-01

    Activation of carbon dioxide is the most important step in its conversion into valuable chemicals. Surfaces of stable oxide with a low work function may be promising for this purpose. Here we report that the surfaces of the inorganic electride [Ca24Al28O64](4+)(e(-))4 activate and split carbon dioxide at room temperature. This behaviour is attributed to a high concentration of localized electrons in the near-surface region and a corrugation of the surface that can trap oxygen atoms and strained carbon monoxide and carbon dioxide molecules. The [Ca24Al28O64](4+)(e(-))4 surface exposed to carbon dioxide is studied using temperature-programmed desorption, and spectroscopic methods. The results of these measurements, corroborated with ab initio simulations, show that both carbon monoxide and carbon dioxide adsorb on the [Ca24Al28O64](4+)(e(-))4 surface at RT and above and adopt unusual configurations that result in desorption of molecular carbon monoxide and atomic oxygen upon heating.

  5. Robust sensor for extended autonomous measurements of surface ocean dissolved inorganic carbon.

    PubMed

    Fassbender, Andrea J; Sabine, Christopher L; Lawrence-Slavas, Noah; De Carlo, Eric H; Meinig, Christian; Maenner Jones, Stacy

    2015-03-17

    Ocean carbon monitoring efforts have increased dramatically in the past few decades in response to the need for better marine carbon cycle characterization. Autonomous pH and carbon dioxide (CO2) sensors capable of yearlong deployments are now commercially available; however, due to their strong covariance, this is the least desirable pair of carbonate system parameters to measure for high-quality, in situ, carbon-cycle studies. To expand the number of tools available for autonomous carbonate system observations, we have developed a robust surface ocean dissolved inorganic carbon (DIC) sensor capable of extended (>year) field deployments with a laboratory determined uncertainty of ±5 μmol kg(-1). Results from the first two field tests of this prototype sensor indicate that measurements of DIC are ∼90% more accurate than estimates of DIC calculated from contemporaneous and collocated measurements of pH and CO2. The improved accuracy from directly measuring DIC gives rise to new opportunities for quantitative, autonomous carbon-cycle studies.

  6. Isotopic Composition of Organic and Inorganic Carbon in Desert Biological Soil Crust Systems

    NASA Astrophysics Data System (ADS)

    Alexander, K.; Hartnett, H.; Anbar, A.; Beraldi, H.; Garcia-Pichel, F.

    2006-12-01

    Biological soil crusts (BSCs) are microbial communities that colonize soil surfaces in many arid regions. BSCs are important sources for fixed carbon and nitrogen in these ecosystems, and they greatly influence the structure, function, and appearance of desert soils. Biological activity of BSCs occurs during pulses of hydration requiring desert crusts to tolerate extremes in UV radiation, temperature, and desiccation. These characteristics make desert crusts unique systems that have received little consideration in the study of biogeochemical processes in extreme environments. This project investigates the impact of BSCs on carbon dynamics within desert soils. Soil cores ranging in depth from 8 to 12 cm were taken in March, 2006 from deserts near Moab, Utah. Two major BSC classes were identified: lichen-dominated (dark and pinnacled) soil crusts and cyanobacteria-dominated (light and flat) soil crusts. These two surface morphologies are related to the different biological communities. Carbon content and stable carbon isotopic composition were determined for the bulk carbon pool, as well as for the organic and inorganic carbon fractions of the soils. Expectedly, there was a net decrease in organic carbon content with depth (0.39-0.27 percent). Stable carbon isotope values for the organic fraction ranged from -5.8 per mil to -24.0 per mil (Avg: -14.4 per mil, S.D: 6.42 per mil). Stable carbon isotope values for the inorganic fraction ranged from 0.3 per mil to -3.6 per mil (Avg: -2.4 per mil, S.D.: 1.05 per mil). The variation in the isotopic composition of the organic carbon was due to a strong depletion below the surface soil value occurring between 3 and 5 cm depth, with an enrichment above the original surface value at depths below 6 to 10 cm. These data suggest that within desert soil crust systems the carbon isotopic signal is complex with both a clear biological imprint (lighter organic carbon) as well as evidence for some mechanism that results in

  7. Effects of inorganic anions on carbon isotope fractionation during Fenton-like degradation of trichloroethene.

    PubMed

    Liu, Yunde; Zhou, Aiguo; Gan, Yiqun; Li, Xiaoqian

    2016-05-01

    Understanding the magnitude and variability in isotope fractionation with respect to specific processes is crucial to the application of stable isotopic analysis as a tool to infer and quantify transformation processes. The variability of carbon isotope fractionation during Fenton-like degradation of trichloroethene (TCE) in the presence of different inorganic ions (nitrate, sulfate, and chloride), was investigated to evaluate the potential effects of inorganic anions on carbon isotope enrichment factor (ε value). A comparison of ε values obtained in deionized water, nitrate solution, and sulfate solution demonstrated that the ε values were identical and not affected by the presence of nitrate and sulfate. In the presence of chloride, however, the ε values (ranging from -6.3±0.8 to 10±1.3‰) were variable and depended on the chloride concentration, indicating that chloride could significantly affect carbon isotope fractionation during Fenton-like degradation of TCE. Thus, caution should be exercised in selecting appropriate ε values for the field application of stable isotope analysis, as various chloride concentrations may be present due to naturally present or introduced with pH adjustment and iron salts during Fenton-like remediation. Furthermore, the effects of chloride on carbon isotope fractionation may be able to provide new insights about reaction mechanisms of Fenton-like processes.

  8. Effects of inorganic anions on carbon isotope fractionation during Fenton-like degradation of trichloroethene.

    PubMed

    Liu, Yunde; Zhou, Aiguo; Gan, Yiqun; Li, Xiaoqian

    2016-05-01

    Understanding the magnitude and variability in isotope fractionation with respect to specific processes is crucial to the application of stable isotopic analysis as a tool to infer and quantify transformation processes. The variability of carbon isotope fractionation during Fenton-like degradation of trichloroethene (TCE) in the presence of different inorganic ions (nitrate, sulfate, and chloride), was investigated to evaluate the potential effects of inorganic anions on carbon isotope enrichment factor (ε value). A comparison of ε values obtained in deionized water, nitrate solution, and sulfate solution demonstrated that the ε values were identical and not affected by the presence of nitrate and sulfate. In the presence of chloride, however, the ε values (ranging from -6.3±0.8 to 10±1.3‰) were variable and depended on the chloride concentration, indicating that chloride could significantly affect carbon isotope fractionation during Fenton-like degradation of TCE. Thus, caution should be exercised in selecting appropriate ε values for the field application of stable isotope analysis, as various chloride concentrations may be present due to naturally present or introduced with pH adjustment and iron salts during Fenton-like remediation. Furthermore, the effects of chloride on carbon isotope fractionation may be able to provide new insights about reaction mechanisms of Fenton-like processes. PMID:26835895

  9. Uptake of atmospheric carbon dioxide into silk fiber by silkworms.

    PubMed

    Magoshi, Jun; Tanaka, Toshihisa; Sasaki, Haruto; Kobayashi, Masatoshi; Magoshi, Yoshiko; Tsuda, Hidetoshi; Becker, Mary A; Inoue, Shun-ichi; Ishimaru, Ken

    2003-01-01

    The relation between the uptake of atmospheric CO(2) and insect's production of silk fiber has not yet been reported. Here, we provide the first quantitative demonstrations that four species of silkworms (Bombyx mori, Samia cynthia ricini, Antheraea pernyi, and Antheraea yamamai) and a silk-producing spider (Nephila clavata) incorporate atmospheric CO(2) into their silk fibers. The abundance of (13)C incorporated from the environment was determined by mass spectrometry and (13)C NMR measurements. Atmospheric CO(2) was incorporated into the silk fibers in the carbonyl groups of alanine, aspartic acid, serine, and glycine and the C(gamma) of aspartic acid. We show a simple model for the uptake of atmospheric CO(2) by silkworms. These results will demonstrate that silkworm has incorporated atmospheric CO(2) into silk fiber via the TCA cycle; however, the magnitude of uptake into the silk fibers is smaller than that consumed by the photosynthesis in trees and coral reefs.

  10. Measurements of the stable carbon isotope composition of dissolved inorganic carbon in the northeastern Atlantic and Nordic Seas during summer 2012

    NASA Astrophysics Data System (ADS)

    Humphreys, M. P.; Achterberg, E. P.; Griffiths, A. M.; McDonald, A.; Boyce, A. J.

    2015-06-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in a batch process for 552 samples collected during two cruises in the northeastern Atlantic and Nordic Seas from June to August 2012. One cruise was part of the UK Ocean Acidification research programme, and the other was a repeat hydrographic transect of the Extended Ellett Line. In combination with measurements made of other variables on these and other cruises, these data can be used to constrain the anthropogenic component of dissolved inorganic carbon (DIC) in the interior ocean, and to help to determine the influence of biological carbon uptake on surface ocean carbonate chemistry. The measurements have been processed, quality-controlled and submitted to an in-preparation global compilation of seawater δ13CDIC data, and are available from the British Oceanographic Data Centre. The observed δ13CDIC values fall in a range from -0.58 to +2.37 ‰, relative to the Vienna Pee Dee Belemnite standard. The mean of the absolute differences between samples collected in duplicate in the same container type during both cruises and measured consecutively is 0.10 ‰, which corresponds to a 1σ uncertainty of 0.09 ‰, and which is within the range reported by other published studies of this kind. A crossover analysis was performed with nearby historical δ13CDIC data, indicating that any systematic offsets between our measurements and previously published results are negligible. Data doi:10.5285/09760a3a-c2b5-250b-e053-6c86abc037c0 (northeastern Atlantic), doi:10.5285/09511dd0-51db-0e21-e053-6c86abc09b95 (Nordic Seas).

  11. Carbon Balance in an Irrigated Corn Field after Inorganic Fertilizer or Manure Application

    NASA Astrophysics Data System (ADS)

    Lentz, R. D.; Lehrsch, G. A.

    2014-12-01

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC and IC (POC, PIC) concentrations in irrigation inflow, runoff, and percolation waters (6-7 irrigations/y); C inputs from soil amendments and crop biomass; harvested C; and gaseous C emissions from field plots cropped to silage corn (Zea mays L.) in southern Idaho. Annual treatments included: (M) 13 (y 1) and 34 Mg/ha (y 2) stockpiled dairy manure; (F) 78 (yr 1) and 195 kg N/ha (y 2) inorganic N fertilizer; or (NA) no amendment--control. The mean annual total C input into M plots averaged 16.1 Mg/ha, 1.4-times greater than that for NA (11.5 Mg/ha) or F (11.1 Mg/ha), while total C outputs for the three treatments were similar, averaging 11.8 Mg/ha. Thus, the manure plots ended each growing season with an average net gain of 3.8 Mg C/ha (a positive net C flux), while the control (-0.5 Mg C/ha) and fertilizer (-0.4 Mg C/ha) treatments finished the season with a net C loss. Atmospheric CO2 incorporated into the crop biomass contributed 96% of the mean annual C input to NA and F plots but only 68% to M plots. We conclude that nutrient amendments substantially influence the short-term carbon balance of our furrow-irrigated system. Amendments had both direct and indirect influences on individual C components, such as the losses of DIC and POC in runoff and DOC in percolation water, producing temporally complex outcomes which may depend on environmental conditions external to the field.

  12. Forest Carbon Uptake and the Fundamental Theorem of Calculus

    ERIC Educational Resources Information Center

    Zobitz, John

    2013-01-01

    Using the fundamental theorem of calculus and numerical integration, we investigate carbon absorption of ecosystems with measurements from a global database. The results illustrate the dynamic nature of ecosystems and their ability to absorb atmospheric carbon.

  13. Small angle neutron and X-ray scattering studies of carbons prepared using inorganic templates

    SciTech Connect

    Sandi, G.; Thiyagarajan, P.; Winans, R.E.; Carrado, K.A.

    1997-09-01

    Small angle neutron (SANS) and X-ray (SAXS) scattering analyses of carbons derived from organic-loaded inorganic template materials, used as anodes in lithium ion cells, have been performed. Two clays were used as templates to load the organic precursors, pillared montmorrillonite (PILC), a layered silicate clay whose sheets have been permanently propped open by sets of thermally stable molecular props, and sepiolite, a natural channeled clay. Five different organic precursors were used to load the PILC: pyrene, styrene, pyrene/trioxane copolymer, ethylene and propylene, whereas only propylene and ethylene were used to load sepiolite. Pyrolysis took place at 700{degrees}C under nitrogen. Values such as hole radius, fractal dimension, cutoff length and density of the final carbons will be compared as a function of the clay and carbon precursors.

  14. Switching predominance of organic versus inorganic carbon exports from an intermediate-size subarctic watershed

    USGS Publications Warehouse

    Dornblaser, Mark M.; Striegl, Rob

    2015-01-01

    Hydrologic exports of dissolved inorganic and organic carbon (DIC, DOC) reflect permafrost conditions in arctic and subarctic river basins. DIC yields in particular, increase with decreased permafrost extent. We investigated the influence of permafrost extent on DIC and DOC yield in a tributary of the Yukon River, where the upper watershed has continuous permafrost and the lower watershed has discontinuous permafrost. Our results indicate that DIC versus DOC predominance switches with interannual changes in water availability and flow routing in intermediate-size watersheds having mixed permafrost coverage. Large water yield and small concentrations from mountainous headwaters and small water yield and high concentrations from lowlands produced similar upstream and downstream carbon yields. However, DOC export exceeded DIC export during high-flow 2011 while DIC predominated during low-flow 2010. The majority of exported carbon derived from near-surface organic sources when landscapes were wet or frozen and from mineralized subsurface sources when infiltration increased.

  15. A systematic investigation of the preparation and properties of composite carbon molecular sieves containing inorganic oxides

    NASA Technical Reports Server (NTRS)

    Foley, Henry C.

    1990-01-01

    The objective of this research is to define the methodology for the preparation and characterization of new carbon-based molecular sieves with composite structures. Carbon molecular sieves have found increasing application in the field of separation and purification of gases. These materials are relatively easy to prepare and their surfaces can be modified to some extent. It is expected that by combining inorganic oxides with the carbonaceous structure one can begin to design composite materials with a wider range of possible chemical and physical properties. In this way, the IOM-CMS materials may confer distinct advantages over pure carbon molecular sieves, not just for separation, but also for catalysis. The most recent results in the design and characterization of these IOM-CMS materials are reviewed and summarized. Directions for further research are also presented.

  16. Shallow Remineralization in the Sargasso Sea Estimated from Seasonal Variations in Oxygen and Dissolved Inorganic Carbon

    NASA Technical Reports Server (NTRS)

    Ono, S.; Ennyu, A.; Najjar, R. G.; Bates, N.

    1998-01-01

    A diagnostic model of the mean annual cycles of dissolved inorganic carbon (DIC) and oxygen below the mixed layer at the Bermuda Atlantic Time-series Study (BATS) site is presented and used to estimate organic carbon remineralization in the seasonal thermocline. The model includes lateral and vertical advection as well as vertical, diffusion. Very good agreement is found for the remineralization estimates based on oxygen and DIC. Net remineralization averaged from mid-spring to early fall is found to be a maximum between 120 and 140 in. Remineralization integrated between 100 (the compensation depth) and 250 m during this period is estimated to be about 1 mol C/sq m. This flux is consistent with independent estimates of the loss of particulate and dissolved organic carbon.

  17. Carbon isotope fractionation of dissolved inorganic carbon (DIC) due to outgassing of carbon dioxide from a headwater stream

    USGS Publications Warehouse

    Doctor, D.H.; Kendall, C.; Sebestyen, S.D.; Shanley, J.B.; Ohte, N.; Boyer, E.W.

    2008-01-01

    The stable isotopic composition of dissolved inorganic carbon (??13C-DIC) was investigated as a potential tracer of streamflow generation processes at the Sleepers River Research Watershed, Vermont, USA. Downstream sampling showed ?? 13C-DIC increased between 3-5??? from the stream source to the outlet weir approximately 0??5 km downstream, concomitant with increasing pH and decreasing PCO2. An increase in ??13C-DIC of 2.4 ?? 0??1??? per log unit decrease of excess PCO2 (stream PCO2 normalized to atmospheric PCO2) was observed from downstream transect data collected during snowmelt. Isotopic fractionation of DIC due to CO2 outgassing rather than exchange with atmospheric CO2 may be the primary cause of increased ?? 13C-DIC values downstream when PCO2 of surface freshwater exceeds twice the atmospheric CO2 concentration. Although CO2 outgassing caused a general increase in stream ??13C-DIC values, points of localized groundwater seepage into the stream were identified by decreases in ??13C-DIC and increases in DIC concentration of the stream water superimposed upon the general downstream trend. In addition, comparison between snowmelt, early spring and summer seasons showed that DIC is flushed from shallow groundwater flowpaths during snowmelt and is replaced by a greater proportion of DIC derived from soil CO2 during the early spring growing season. Thus, in spite of effects from CO2 outgassing, ??13C of DIC can be a useful indicator of groundwater additions to headwater streams and a tracer of carbon dynamics in catchments. Copyright ?? 2007 John Wiley & Sons, Ltd.

  18. Measurements of the stable carbon isotope composition of dissolved inorganic carbon in the Northeastern Atlantic and Nordic Seas during summer 2012

    NASA Astrophysics Data System (ADS)

    Humphreys, M. P.; Achterberg, E. P.; Griffiths, A. M.; McDonald, A.; Boyce, A. J.

    2015-01-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in samples collected during two cruises in the Northeastern Atlantic and Nordic Seas from June to August 2012. One cruise was part of the UK Ocean Acidification research programme, and the other was a repeat hydrographic transect of the Extended Ellett Line. In combination with measurements made of various other variables on these and other cruises, these data can be used to constrain the anthropogenic component of DIC in the interior ocean, and also assist in determining the influence of biological carbon uptake on surface ocean carbonate chemistry. The measurements have been processed, quality-controlled and submitted to an in-preparation global compilation of seawater δ13CDIC data, and are available from the British Oceanographic Data Centre. The observed δ13CDIC values fall in a range from -0.58 to +2.37‰, relative to the Vienna Peedee Belemnite standard. From duplicate samples collected during both cruises, the precision for the 552 results is 0.07‰, which is similar to other published studies of this kind. Data doi:10.5285/09760a3a-c2b5-250b-e053-6c86abc037c0 (Northeastern Atlantic), doi:10.5285/09511dd0-51db-0e21-e053-6c86abc09b95 (Nordic Seas).

  19. On the relations between the oceanic uptake of CO{sub 2} and its carbon isotopes

    SciTech Connect

    Heimann, M.; Maier-Reimer, E.

    1996-03-01

    The first part of this paper reviews the derivation and compares the results of three methods to determine the oceanic uptake of excess carbon dioxide. For the time period 1970 to 1990, the three methods yield inconsistent uptake rates; however, a consistent scenario was established by using a nonlinear estimation to account for uncertainties in the available carbon cycle data. Parametric and sensitivity analyses show that the dynamic constraint and the ocean-atmosphere Carbon 13 budget methods appear to yield smaller errors in estimation of carbon dioxide uptake with respect to uncertainties in carbon cycle data. In the second part of this paper, two simulations of the three calculation methods are reported. The simulations used the three-dimensional Hamburg model of the ocean carbon cycle to determine the extent to which Carbon 13 and bomb radiocarbon may be used to track the fate of anthropogenic carbon dioxide in the ocean. Analysis of the simulation results shows that the Carbon 13 isotope tracks the oceanic penetration of man-made carbon dioxide, while bomb produced radiocarbon does not correlate as well. 52 refs., 9 figs., 3 tabs.

  20. Carbonate concretions as a significant component of ancient marine carbon cycles: Insights from paired organic and inorganic carbon isotope analyses of a Cretaceous shale

    NASA Astrophysics Data System (ADS)

    Loyd, S. J.

    2014-12-01

    Carbonate concretions often occur within fine-grained, organic-rich sedimentary rocks. This association reflects the common production of diagenetic minerals through biologic cycling of organic matter. Chemical analysis of carbonate concretions provides the rare opportunity to explore ancient shallow diagenetic environments, which are inherently transient due to progressive burial but are an integral component of the marine carbon cycle. The late Cretaceous Holz Shale (~80 Ma) contains abundant calcite concretions that exhibit textural and geochemical characteristics indicative of relatively shallow formation (i.e., near the sediment-water interface). Sampled concretions contain between 5.4 and 9.8 wt.% total inorganic carbon (TIC), or ~45 and 82 wt.% CaCO3, compared to host shale values which average ~1.5 wt.% TIC. Organic carbon isotope compositions (δ13Corg) are relatively constant in host and concretion samples ranging from ­-26.3 to -24.0‰ (VPDB). Carbonate carbon isotope compositions (δ13Ccarb) range from -22.5 to -3.4‰, indicating a significant but not entirely organic source of carbon. Concretions of the lower Holz Shale exhibit considerably elevated δ13Ccarb values averaging -4.8‰, whereas upper Holz Shale concretions express an average δ13Ccarb value of -17.0‰. If the remaining carbonate for lower Holz Shale concretions is sourced from marine fluids and/or dissolved marine carbonate minerals (e.g., shells), a simple mass balance indicates that ~28% of concretion carbon was sourced from organic matter and ~72% from late Cretaceous marine inorganic carbon (with δ13C ~ +2.5‰). Upper Holz Shale calculations indicate a ~73% contribution from organic matter and a ~27% contribution from inorganic carbon. When normalized for carbonate, organic contents within the concretions are ~2-13 wt.% enriched compared to host contents. This potentially reflects the protective nature of cementation that acts to limit permeability and chemical destruction of

  1. Dissolved inorganic carbon and stable carbon isotopic evolution of neutral mine drainage interacting with atmospheric CO2(g).

    PubMed

    Abongwa, Pride Tamasang; Atekwana, Eliot Anong; Puckette, James

    2016-03-01

    We investigated the spatial variations in the concentrations of dissolved inorganic carbon (DIC), the stable carbon isotopic composition (δ(13)C) of DIC and the δ(13)C of carbonate precipitated from neutral mine drainage interacting with the atmospheric CO2(g). We assessed the chemical, DIC and δ(13)CDIC evolution of the mine drainage and the δ(13)C evolution of carbonate precipitates for a distance of 562 m from the end of an 8 km tunnel that drains a mine. Our results show that as the mine drainage interacts with atmospheric CO2(g) the outgassing of CO2 due to the high initial partial pressure of CO2 (pCO2) causes the DIC to evolve under kinetic conditions followed by equilibration and then under equilibrium conditions. The carbonate evolution was characterized by spatial increases in pH, decreasing concentrations of Ca(2+) and DIC and by the precipitation of carbonate. The δ(13)CDIC showed a larger enrichment from the tunnel exit to 38 m, moderate continuous enrichment to 318 m and almost no enrichment to 562 m. On the other hand, the δ(13)C of the carbonate precipitates also showed large enrichment from the tunnel exit to 38 m, moderate enrichment to 318 m after which the δ(13)C remained nearly constant. The enrichment in the δ(13)C of the DIC and the carbonate precipitates from 0 to 38 m from kinetic fractionation caused by CO2(g) outgassing was followed by a mix of kinetic fractionation and equilibrium fractionation controlled by carbon exchange between DIC and atmospheric CO2(g) to 318 m and then by equilibrium fractionation from 318 to 562 m. From the carbonate evolution in this neutral mine drainage, we estimated that 20% of the carbon was lost via CO2 outgassing, 12% was sequestered in sediments in the drainage ponds from calcite precipitation and the remainder 68% was exported to the local stream.

  2. [Dissolved inorganic carbon and its carbon isotope composition in cascade reservoir of the Maotiao River during summer and autumn].

    PubMed

    Li, Gan-rong; Liu, Cong-qiang; Chen, Chuan; Wang, Bao-li; Li, Jun; Li, Si-liang; Liu, Xiao-long; Wang, Fu-shun

    2009-10-15

    Water samples along water column in the front of dams and samples at 0.5 m below surface water from tributary rivers were collected in July and October, 2007. The water chemistry, concentrations of dissolve inorganic carbon and its carbon isotopic compositions were determined, in order to investigate the geochemical behavior of carbon in the Maotiao River. This study aimed to understand the variations of the concentrations of dissolved inorganic carbon (DIC) and delta13 C(DIC) during its transport along the cascade reservoirs and river system. The results showed that DIC concentrations in summer were lower than that in autumn. In summer, the DIC concentrations were 1.35-2.84 mmol/L, with an average value of 2.12 mmol/L; and in autumn they fell into 2.03-3.98 mmol/L, with an average value of 2.67 mmol/L. The delta13 CD1 in surface water along Maotiao River ranged from -10.3% per hundred to -5.1% per hundred in summer, with a value of -8.6% per hundred in average, and in autumn, delta3 C(DIC) became more negative, and had a range from -13.0% per hundred to -6.9% per hundred, with an average value of -9.0% per hundred. Generally, DIC in surface water showed a trend to decrease from the upper reaches to lower reaches along Maotiao River, and t3 Cc1 gradually becam me more negative downstream. On the water column, DIC concentrations were higher in hypolimnion, while a delta13 C(DIC) had a reverse trend with higher values occurred in epilimnion. The results indicated that the hydrochemistry of river could be significantly changed by river damming processes. As for carbon, reservoir should be an important place for the transformation among the different carbon species.

  3. Subsurface Monitor for Dissolved Inorganic Carbon at Geological Sequestration Site Phase 1 SBIR Final Report

    SciTech Connect

    Sheng Wu

    2012-08-03

    Phase I research of this SBIR contract has yielded anticipated results and enable us to develop a practical new instrument to measure the Dissolved Inorganic Carbons (DIC) as well as Supercritical (SC) CO2 in underground brine water at higher sensitivity, lower cost, higher frequency and longer period of time for the Monitoring, Verification & Accounting (MVA) of CO2 sequestration as well as Enhanced Oil Recovery (EOR). We show that reduced cost and improved performance are possible; both future and emerging market exist for the proposed new instrument.

  4. Integration of inorganic nanostructures with polydopamine-derived carbon: tunable morphologies and versatile applications

    NASA Astrophysics Data System (ADS)

    Kong, Junhua; Seyed Shahabadi, Seyed Ismail; Lu, Xuehong

    2016-01-01

    Polydopamine (PDA), a mussel adhesive-inspired biomimetic polymer, has attracted tremendous attention owing to its extremely versatile adhesion properties, facile aqueous coating process, capability of self-assembly to form nanostructures, and abundant surface functional groups for secondary modification. PDA is also a fantastic carbon source because it gives nitrogen (N)-doped graphite-like carbon in high yield, and the carbonized PDA (C-PDA) thin coatings have similar properties to those of N-doped multilayered graphene, i.e., they exhibit high electrical conductivity, and good electrochemical and mechanical properties. In comparison with other carbon sources, an outstanding feature of PDA lies in its ease of integration with inorganic nanostructures and capability for easy tailoring the structure and morphology of the resultant composite nanostructures. In this article, different routes for the preparation of C-PDA-based composite nanostructures, such as carbon/metal oxide and carbon/Si hollow, mesoporous, core-shell, yolk-shell nanostructures, are introduced with typical examples. The structures, morphologies and properties of the C-PDA-based composite nanostructures are also reviewed, and their potential applications in various engineering fields, such as energy storage, solar water splitting, flexible electronics, catalysis, sensing and environmental engineering, are highlighted. Finally a future outlook for this fascinating composite-nanostructure enabler is also presented.

  5. [Biogeochemical processes of the major ions and dissolved inorganic carbon in the Guijiang River].

    PubMed

    Tang, Wen-Kui; Tao, Zhen; Gao, Quan-Zhou; Mao, Hai-Ruo; Jiang, Guang-Hui; Jiao, Shu-Lin; Zheng, Xiong-Bo; Zhang, Qian-Zhu; Ma, Zan-Wen

    2014-06-01

    Within the drainage basin, information about natural processes and human activities can be recorded in the chemical composition of riverine water. The analysis of the Guijiang River, the first level tributary of the Xijiang River, demonstrated that the chemical composition of water in the Guijiang River was mainly influenced by the chemical weathering of carbonate rocks within the drainage basin, in which CO2 was the main erosion medium, and that the weathering of carbonate rock by H2SO4 had a remarkable impact on the water chemical composition in the Guijiang River. Precipitation, human activities, the weathering of carbonate rocks and silicate rocks accounted for 2.7%, 6.3%, 72.8% and 18.2% of the total dissolved load, respectively. The stable isotopic compositions of dissolved inorganic carbon (delta13C(DIC)) indicated that DIC in the Guijiang River had been assimilated by the phytoplankton in photosynthesis. The primary production of phytoplankton contributed to 22.3%-30.9% of particulate organic carbon (POC) in the Guijiang River, which implies that phytoplankton can transform DIC into POC by photosynthesis, and parts of POC will sink into the bottom of the river in transit, which leads into the formation of burial organic carbon.

  6. Biological uptake of polychlorinated biphenyls by Macoma balthica from sediment amended with activated carbon

    USGS Publications Warehouse

    McLeod, Pamela B.; van den Heuvel-Greve, Martine J.; Luoma, S.N.; Luthy, R.G.

    2007-01-01

    This work characterizes the efficacy of activated carbon amendment in reducing polychlorinated biphenyl (PCB) bioavailability to clams (Macoma balthica) from field-contaminated sediment (Hunters Point Naval Shipyard, San Francisco Bay, CA, USA) Test methods were developed for the use of clams to investigate the effects of sediment amendment on biological uptake. Sediment was mixed with activated carbon for one month. Bioaccumulation tests (28 d) were employed to assess the relationships between carbon dose and carbon particle size on observed reductions in clam biological uptake of PCBs. Extraction and cleanup protocols were developed for the clam tissue. Efficacy of activated carbon treatment was found to increase with both increasing carbon dose and decreasing carbon particle size. Average reductions in bioaccumulation of 22, 64, and 84% relative to untreated Hunters Point sediment were observed for carbon amendments of 0.34, 1.7, and 3.4%, respectively. Average bioaccumulation reductions of 41, 73, and 89% were observed for amendments (dose = 1.7% dry wt) with carbon particles of 180 to 250, 75 to 180, and 25 to 75 ??m, respectively, in diameter, indicating kinetic phenomena in these tests. Additionally, a biodynamic model quantifying clam PCB uptake from water and sediment as well as loss through elimination provided a good fit of experimental data. Model predictions suggest that the sediment ingestion route contributed 80 to 95% of the PCB burdens in the clams. ?? 2007 SETAC.

  7. Early snowmelt decreases ablation period carbon uptake in a high elevation, subalpine forest, Niwot Ridge, Colorado, USA

    NASA Astrophysics Data System (ADS)

    Winchell, T. S.; Molotch, N. P.; Barnard, D. M.

    2015-12-01

    The snow ablation period is a time of great potential for carbon uptake in high-elevation, subalpine forests. During this period, water availability associated with snowmelt promotes photosynthetic carbon uptake, while snow cover diminishes carbon losses from soil respiration. Although the ablation period can be as short as two weeks, as much as 30% of the total seasonal carbon uptake can occur during this period. Varying ablation period dynamics, however, can result in varying rates of carbon uptake during this integral uptake period. We use fifteen years of observational climate flux and snow water equivalent (SWE) data for a subalpine forest in the Colorado Rocky Mountains to analyze carbon uptake trends during the annual ablation period. Specifically, we focus on how the timing of peak SWE affects carbon uptake during the ablation period. We find that when the snowmelt period occurs one month earlier than average, the forest experiences an ablation period mean air temperature of 2.7° C, approximately 5° C colder than an ablation period that occurs one month later than average. This early, colder atmospheric condition leads to daytime carbon uptake rates that are 2.5 gC/m2/day less than the later, warmer period, which results in 47 gC/m2 less ablation period carbon uptake. As most climate models project peak SWE to occur earlier under various warming scenarios, we can expect to see a trend of less carbon uptake during future ablation periods. We expect to see a decrease in total growing season carbon uptake if the post-snowmelt period is unable to compensate for the decrease in ablation period carbon uptake.

  8. Regeneration of spent powdered activated carbon saturated with inorganic ions by cavitation united with ion exchange method.

    PubMed

    Li, Gang; Gao, Hong; Li, Yansheng; Yang, Huixin

    2011-06-01

    Using ion exchange resin as transfer media, regenerate powdered activated carbon (PAC) adsorbed inorganic ions by cavitation to enhance the transfer; we studied how the regeneration time and the mass ratio of resin and PAC influence the regeneration rate respectively through re-adsorption. The result showed that the effective regeneration of PAC saturated with inorganic ions was above 90% using ion exchange resin as media and transfer carrier, the quantity of PAC did not reduced but activated in the process. PMID:25084579

  9. Photosynthetic use of inorganic carbon in deep-water kelps from the Strait of Gibraltar.

    PubMed

    García-Sánchez, María Jesús; Delgado-Huertas, Antonio; Fernández, José Antonio; Flores-Moya, Antonio

    2016-03-01

    Mechanisms of inorganic carbon assimilation were investigated in the four deep-water kelps inhabiting sea bottoms at the Strait of Gibraltar; these species are distributed at different depths (Saccorhiza polysiches at shallower waters, followed by Laminaria ochroleuca, then Phyllariopsis brevipes and, at the deepest bottoms, Phyllariopsis purpurascens). To elucidate the capacity to use HCO3(-) as a source of inorganic carbon for photosynthesis in the kelps, different experimental approaches were used. Specifically, we measured the irradiance-saturated gross photosynthetic rate versus pH at a constant dissolved inorganic carbon (DIC) concentration of 2 mM, the irradiance-saturated apparent photosynthesis (APS) rate versus DIC, the total and the extracellular carbonic anhydrase (CAext), the observed and the theoretical photosynthetic rates supported by the spontaneous dehydration of HCO3(-) to CO2, and the δ(13)C signature in tissues of the algae. While S. polyschides and L. ochroleuca showed photosynthetic activity at pH 9.5 (around 1.0 µmol O2 m(-2) s(-1)), the activity was close to zero in both species of Phyllariopsis. The APS versus DIC was almost saturated for the DIC values of natural seawater (2 mM) in S. polyschides and L. ochroleuca, but the relationship was linear in P. brevipes and P. purpurascens. The four species showed total and CAext activities but the inhibition of the CAext originated the observed photosynthetic rates at pH 8.0 to be similar to the theoretical rates that could be supported by the spontaneous dehydration of HCO3(-). The isotopic (13)C signatures ranged from -17.40 ± 1.81 to -21.11 ± 1.73 ‰ in the four species. Additionally, the δ(13)C signature was also measured in the deep-water Laminaria rodriguezii growing at 60-80 m, showing even a more negative value of -26.49 ± 1.25 ‰. All these results suggest that the four kelps can use HCO3(-) as external carbon source for photosynthesis mainly by the action of external CAext, but

  10. Effects of inorganic carbon on CO2 efflux from calcareous soil during the closed- jar incubation

    NASA Astrophysics Data System (ADS)

    Zhou, J.; Dong, Y.; Cai, M.; Liang, B.

    2011-12-01

    The estimation of CO2 evolved during the incubation of soil in a closed system is widely used to quantifying microbial activities in soil, and the decomposition of organic matter in soil, and the stabilization of organic carbon in soil. However, there are two carbon pools in calcareous soil, i.e., organic pool and inorganic pool. The measurement of CO2 efflux from calcareous soil using closed-jar incubation can be influenced significantly by the abiotic CO2 production in calcareous soil (Alef, 1995; Stvenson and Verburg, 2006). The amount of soil inorganic carbon (SIC) is ten times greater than that of soil organic C (SOC) in arid and semiarid regions. And the arid and semiarid regions occupied 30% of the earth's area. Therefore, more studies are needed to evaluate the contribution of SIC on the CO2 production with the closed-jar system. In this study, we conducted the different incubation experiments with a calcareous soil. Its SOC content was 5.81g/kg, the SIC content was 0.74 g/kg, and pH was 7.67. We added the different rates of inorganic carbonates (as CaCO3 or MgCO3) into soil, and incubated the soil with the closed-jar method. And the CO2 trapped in the NaOH solutions at the different time intervals during the incubation was determined by BaCl2 titration method. The three incubation experiments indicated that adding either CaCO3 or MgCO3 increased the emission of CO2 during the incubation. The increasing extent of CO2 production in the 100-day incubation ranged from 12.0% (adding CaCO3) to 460.1 % (adding MgCO3) in the soils with additional carbonates. After adding CaCO3 and MgCO3, their effects on the CO2 productions during the incubation were different. The amounts of CO2 produced increased as the amounts of CaCO3 increased, while the amounts of CO2 produced decreased as the amounts of MgCO3 increased. When the same content of inorganic carbon was added, the CO2 productions were significantly higher in the MgCO3 treatments than in CaCO3 treatments at the

  11. Inventory of released inorganic carbon from organic matter remineralization in the deeper Arabian Sea

    NASA Astrophysics Data System (ADS)

    Hupe, Axel; Thomas, Helmuth; Ittekkot, Venugopalan; Lendt, Ralf

    2001-12-01

    An attempt is made to quantify the biological carbon pump in Arabian Sea subsurface waters by estimating the total concentrations of remineralized dissolved inorganic carbon (DICrem) and its water column inventory. The influence of different sets of -ΔO2/ΔCorg ratios, which are either constant or variable with depth, on the estimate is assessed. Throughout the water column the horizontally mapped DICrem concentrations increase northward due to enlarged export fluxes of organic matter and subsequently enhanced remineralization processes as well as to the accumulation of remineralization products along the trajectory path of the water masses ventilating the Arabian Sea from the southern Indian Ocean. The choice of the remineralization ratios generates significant differences in the DICrem concentrations at specific depth horizons. The DICrem inventory of the Arabian Sea between 500 and 4500 m in the years 1995-1997 amounts to ˜39-44 Gt C depending on the applied remineralization ratios.

  12. Forest carbon uptake in North America's aging temperate deciduous forests: A data-theory-model mismatch?

    NASA Astrophysics Data System (ADS)

    Gough, C. M.; Curtis, P.; Bond-Lamberty, B. P.; Hardiman, B. S.; Scheuermann, C. M.; Nave, L. E.; Nadelhoffer, K. J.

    2015-12-01

    Century-old temperate deciduous forests in the US upper Midwest and Northeast power much of North America's terrestrial carbon sink, but these forests' carbon uptake capacity is expected to soon decline. But will this really happen? We marshal empirical data and ecological theory to show that declines in carbon uptake are not imminent in regrown temperate deciduous forests during coming decades, despite long-held assumptions and modeling results that predict declining carbon uptake during middle stages of ecosystem development. Age and production data for temperate deciduous forests, synthesized from published literature, do not provide evidence for declining net primary and ecosystem production (NPP and NEP, respectively) within the age-range most regional forests will occupy over the next half-century. Ecological theory suggests a mechanism for sustained carbon uptake in the region's aging forests in which high-frequency, low-severity disturbances maintain NPP and NEP by increasing ecosystem complexity. This theoretical model is supported by observations from the Forest Accelerated Succession Experiment in Michigan, USA, but such mechanisms sustaining production in old forests are not broadly represented in ecosystem models. Ecosystems experiencing low-frequency, high-severity disturbances that simplify ecosystem complexity do exhibit declining production during middle stages of succession, but we suggest that such scenarios have exerted a disproportionate influence on prevailing modeling and ecological assumptions regarding age-related declines in forest production. We conclude that there is wide ecological space for forests to sustain high rates of carbon uptake during middle stages of ecosystem development, and that advancing mechanistic understanding of long-term forest carbon cycle dynamics is essential to modeling the continent's future carbon sink strength.

  13. The effects of estuarine processes on the fluxes of inorganic and organic carbon in the Yellow River estuary

    NASA Astrophysics Data System (ADS)

    Gu, Dianjun; Zhang, Longjun; Jiang, Liqing

    2009-12-01

    Riverine carbon flux is an important component of the global carbon cycle. The spatial and temporal variations of organic and inorganic carbon were examined during both dry and wet seasons in the Yellow River estuary. Concentrations of dissolved organic carbon (DOC) and dissolved inorganic carbon (DIC) in the Yellow River during dry seasons were higher than those during wet seasons. The effective concentrations of DOC (CDOC*) were higher than the observed DOC at zero salinity. This input of DOC in the Yellow River estuary was due to sediment desorption processes in low salinity regions. In contrast to DOC, the effective concentrations of DIC were 10% lower than the DIC measured at freshwater end, and the loss of DIC was caused by CaCO3 precipitation in low salinity region. Particulate organic carbon (POC) and particulate inorganic carbon (PIC) contents of the particles stabilized to constant values (0.5%±0.05% and 1.8%±0.2%, respectively) within the turbidity maximum zone (TMZ) and showed no noticeable seasonal variations. A rapid drop of PIC and rise of POC occurred simultaneously outside the TMZ due to an intense dilution of riverine inorganic-rich particles being transported into a pool of aquatic organic-poor particles outside the TMZ. Annually, the Yellow River transported 6.95×105 t of DIC, 0.64×105 t of DOC, 78.58×105 t of PIC and 2.29×105 t of POC to the sea.

  14. The biogeochemistry of inorganic carbon and nutrients in the Pearl River estuary and the adjacent Northern South China Sea

    NASA Astrophysics Data System (ADS)

    Cai, Wei-Jun; Dai, Minhan; Wang, Yongchen; Zhai, Weidong; Huang, Tao; Chen, Shuitu; Zhang, Fan; Chen, Zhaozhang; Wang, Zhaohui

    2004-08-01

    The Zhu-jiang (Pearl River) estuary and its adjacent continental shelf in the Northern South China Sea (SCS) is unique in that its drainage basin is located entirely in a subtropical zone with heavy population development, and therefore represents an important regime for biogeochemical studies on how large rivers influence continental shelves. The near-zero salinity end member has high nutrient concentrations (silicate 130-140 μM, nitrate 75-100 μM and phosphate 0.2-1.2 μM) and relatively high total dissolved inorganic carbon (DIC) (1500 μM) and alkalinity (˜1650 μM) values. Water column DIC, alkalinity, and nutrient in the estuary are largely controlled by mixing of waters from different tributaries with different drainage basin chemistry, anthropogenic influence, and degree of estuarine recycling. Biological uptake of nutrients and inorganic carbon occur in the outer estuary and inner shelf areas supported by riverine nutrients. The N/P and Si/P ratios are generally very high within the estuary. The summertime area-integrated biological production rate of 0.8 gC m -2 d -1 is estimated based on the depletion of DIC and alkalinity relative to the conservative mixing line and a plume travel time. This estimate agrees reasonably well with 14C based primary production rates (PP) and with that from effective river phosphate flux. Biological production decreases about 10-fold in the open continental shelf and slope and is largely supported by mixing with subsurface water. A comparison of DIC, phosphate, and nitrate concentrations in the surface mixing layer and at the bottom of the euphotic zone with the 14C-based PP (0.13 gC m -2 d -1) suggests that the surface water residence time in the Northern SCS is ˜1.3 years. The N/P, Si/P, and Si/C ratios are 15, 25, and 0.15, respectively. The subtropical Pearl River study is also compared to other large rivers with regard to differences in both natural processes (i.e., weathering rates) and anthropogenic influences (i

  15. Inorganic carbon cycling and biogeochemical processes in an Arctic inland sea (Hudson Bay)

    NASA Astrophysics Data System (ADS)

    Burt, William J.; Thomas, Helmuth; Miller, Lisa A.; Granskog, Mats A.; Papakyriakou, Tim N.; Pengelly, Leah

    2016-08-01

    The distributions of carbonate system parameters in Hudson Bay, which not only receives nearly one-third of Canada's river discharge but is also subject to annual cycles of sea-ice formation and melt, indicate that the timing and magnitude of freshwater inputs play an important role in carbon biogeochemistry and acidification in this unique Arctic ecosystem. This study uses basin-wide measurements of dissolved inorganic carbon (DIC) and total alkalinity (TA), as well as stable isotope tracers (δ18O and δ13CDIC), to provide a detailed assessment of carbon cycling processes within the bay. Surface distributions of carbonate parameters reveal the particular importance of freshwater inputs in the southern portion of the bay. Based on TA, we surmise that the deep waters in the Hudson Bay are largely of Pacific origin. Riverine TA end-members vary significantly both regionally and with small changes in near-surface depths, highlighting the importance of careful surface water sampling in highly stratified waters. In an along-shore transect, large increases in subsurface DIC are accompanied by equivalent decreases in δ13CDIC with no discernable change in TA, indicating a respiratory DIC production on the order of 100 µmol kg-1 DIC during deep water circulation around the bay.

  16. Sudden increase in atmospheric CO2 concentration reveals strong coupling between shoot carbon uptake and root nutrient uptake in young walnut trees.

    PubMed

    Delaire, Mickaël; Frak, Ela; Sigogne, Monique; Adam, Boris; Beaujard, François; Le Roux, Xavier

    2005-02-01

    We studied the short-term (i.e., a few days) effect of a sudden increase in CO2 uptake by shoots on nutrient (NO3-, P ion, K+, Ca2+ and Mg2+) uptake by roots during vegetative growth of young walnut (Juglans nigra x J. major L.) trees. The increase in CO2 uptake was induced by a sudden increase in atmospheric CO2 concentration ([CO2]). Twelve 2-year-old trees were transplanted and grown in perlite-filled pots in a greenhouse. Rates of CO2 uptake and water loss by individual trees were determined by a branch bag method from 3 days before until 6 days after [CO2] was increased. Nutrient uptake rates were measured concurrently by a hydroponic recirculating nutrient solution system that provided non-limiting supplies of water and nutrients. Six control trees were kept in ambient [CO2] (360 ppm), and [CO2] was increased to 550 ppm for one set of three trees and to 800 ppm for another set of three trees. Before imposing the elevated [CO2] treatments, all trees exhibited similar daily water loss, CO2 uptake and nutrient uptake rates when expressed per unit leaf area to account for the tree size effect. Daily water loss rates were only slightly affected by elevated [CO2]. Carbon dioxide uptake rates greatly increased with increasing atmospheric [CO2], and nutrient uptake rates were proportional to CO2 uptake rates during the study period, except for P ion. Our results show that, despite the important carbon and nitrogen storage capacities previously observed in young walnut trees, nutrient uptake by roots is strongly coupled to carbon uptake by shoots over periods of a few days. PMID:15574404

  17. Constraints on Early Triassic carbon cycle dynamics from paired organic and inorganic carbon isotope records

    NASA Astrophysics Data System (ADS)

    Meyer, K. M.; Yu, M.; Payne, J.

    2010-12-01

    Marine anoxia and euxinia are widely cited as a leading cause of the end-Permian mass extinction and a factor limiting recovery during the Early Triassic. Middle Triassic diversification coincided with the waning of anoxia and stabilization of the global carbon cycle, suggesting that environment-ecosystem linkages were important to biological recovery. However, the mechanisms responsible for these phenomena remain poorly constrained. Here we employ a carbon isotope approach to examine the nature of the carbon cycle from Late Permian to Middle Triassic time. We measured the carbon isotopic composition of carbonates (δ13Ccarb) and organic matter (δ13Corg) from an exceptionally preserved carbonate platform in the Nanpanjiang Basin of south China. The δ13Ccarb of limestones from 5 stratigraphic sections spanning a paleoenvironmental gradient in south China records multiple large isotope excursions characteristic of the Lower Triassic. Previous modeling suggests that the carbon isotope record is best explained by multiple pulses carbon release to the ocean-atmosphere system. Addition of Δ13C values (δ13Ccarb - δ13Corg) for this interval allows us to evaluate whether the carbon cycle perturbations are indeed due to changes in atmospheric CO2 or from changing sources of organic matter input or fluctuating redox state of the oceans during this interval.

  18. Dissolved inorganic carbon isotopic composition of the Gulf of Mexico deep-water masses.

    NASA Astrophysics Data System (ADS)

    Quintanilla-Terminel, J. G.; Herguera, J. C.; Ferreira-Bartrina, V.; Hernández-Ayón, J. M.; Camacho-Ibar, V.

    2014-12-01

    This study provides new data for the establishment of a carbon biogeochemical dynamics baseline in the deep Gulf of Mexico (GM) based on carbon isotopes in dissolved inorganic carbon. Water samples from 40 deep-water stations south of 25˚N were collected during XIXIMI-2 cruise, July 2011, aboard BO/Justo Sierra. Vertical profiles of temperature, salinity and dissolved oxygen (DO) were further measured in each station. In the Stable Isotopes Laboratory at CICESE we determined the carbon isotopic composition of the dissolved inorganic carbon (DIC) (δ13CDIC). Remarkably, density, DO and δ13CCID profiles showed a clear difference between the Loop current and the deep-waters of the GM south of 25˚N. We found the following average δ13CCID values in the Loop current and in the deep-waters of the Gulf: subtropical underwater (SUW): 0.73±0.06‰ and 0.86±0.04‰; 18 degree water (18W): 0.76 ± 0.08‰ and 0.58± 0.06‰; North Atlantic central water (NACW): 0.77 ± 0.05‰ and 0.71 ± 0.09‰; South Atlantic central water (SACW): 0.80 ± 0.08‰ and 0.77 ± 0.07‰; Antartic intermediate water (AAIW): 1.00 ± 0.06‰ and 0.90 ± 0.08‰; North Atlantic deep water (NADW): 1.03 ± 0.06‰ and 1.01 ± 0.10‰. We will discuss how the biological component, δ13CCID-BIO, of subsurface water masses match very closely the apparent oxygen utilization relation described by Kroopnick, 1985, with the exception of SUW, and as a consequence the 18W is probably the water mass most affected by organic carbon remineralization processes in the GM south of 25˚N. We further show how these waters seem to store a larger proportion of anthropogenic carbon than the deeper water masses.

  19. Inorganic carbon fluxes across the vadose zone of planted and unplanted soil mesocosms

    NASA Astrophysics Data System (ADS)

    Thaysen, E. M.; Jacques, D.; Jessen, S.; Andersen, C. E.; Laloy, E.; Ambus, P.; Postma, D.; Jakobsen, I.

    2014-03-01

    The efflux of carbon dioxide (CO2) from soils influences atmospheric CO2 concentrations and thereby climate change. The partitioning of inorganic carbon fluxes in the vadose zone between emission to the atmosphere and to the groundwater was investigated. Carbon dioxide partial pressure in the soil gas (pCO2), alkalinity, soil moisture and temperature were measured over depth and time in unplanted and planted (barley) mesocosms. The dissolved inorganic carbon (DIC) percolation flux was calculated from the pCO2, alkalinity and the water flux at the mesocosm bottom. Carbon dioxide exchange between the soil surface and the atmosphere was measured at regular intervals. The soil diffusivity was determined from soil radon-222 (222Rn) emanation rates and soil air Rn concentration profiles, and was used in conjunction with measured pCO2 gradients to calculate the soil CO2 production. Carbon dioxide fluxes were modelled using the HP1 module of the Hydrus 1-D software. The average CO2 effluxes to the atmosphere from unplanted and planted mesocosm ecosystems during 78 days of experiment were 0.1 ± 0.07 and 4.9 ± 0.07 μmol carbon (C) m-2 s-1, respectively, and largely exceeded the corresponding DIC percolation fluxes of 0.01 ± 0.004 and 0.06 ± 0.03 μmol C m-2 s-1. Post-harvest soil respiration (Rs) was only 10% of the Rs during plant growth, while the post-harvest DIC percolation flux was more than one third of the flux during growth. The Rs was controlled by production and diffusivity of CO2 in the soil. The DIC percolation flux was largely controlled by the pCO2 and the drainage flux due to low solution pH. Plant biomass and soil pCO2 were high in the mesocosms as compared to a standard field situation. Our results indicate no change of the cropland C balance under elevated atmospheric CO2 in a warmer future climate, in which plant biomass and soil pCO2 are expected to increase.

  20. Elevated CO2 maintains grassland net carbon uptake under a future heat and drought extreme

    PubMed Central

    Roy, Jacques; Picon-Cochard, Catherine; Augusti, Angela; Benot, Marie-Lise; Thiery, Lionel; Darsonville, Olivier; Landais, Damien; Piel, Clément; Defossez, Marc; Devidal, Sébastien; Escape, Christophe; Ravel, Olivier; Fromin, Nathalie; Volaire, Florence; Milcu, Alexandru; Bahn, Michael; Soussana, Jean-François

    2016-01-01

    Extreme climatic events (ECEs) such as droughts and heat waves are predicted to increase in intensity and frequency and impact the terrestrial carbon balance. However, we lack direct experimental evidence of how the net carbon uptake of ecosystems is affected by ECEs under future elevated atmospheric CO2 concentrations (eCO2). Taking advantage of an advanced controlled environment facility for ecosystem research (Ecotron), we simulated eCO2 and extreme cooccurring heat and drought events as projected for the 2050s and analyzed their effects on the ecosystem-level carbon and water fluxes in a C3 grassland. Our results indicate that eCO2 not only slows down the decline of ecosystem carbon uptake during the ECE but also enhances its recovery after the ECE, as mediated by increases of root growth and plant nitrogen uptake induced by the ECE. These findings indicate that, in the predicted near future climate, eCO2 could mitigate the effects of extreme droughts and heat waves on ecosystem net carbon uptake. PMID:27185934

  1. Can frequent precipitation moderate the impact of drought on peatmoss carbon uptake in northern peatlands?

    PubMed

    Nijp, Jelmer J; Limpens, Juul; Metselaar, Klaas; van der Zee, Sjoerd E A T M; Berendse, Frank; Robroek, Bjorn J M

    2014-07-01

    Northern peatlands represent a large global carbon store that can potentially be destabilized by summer water table drawdown. Precipitation can moderate the negative impacts of water table drawdown by rewetting peatmoss (Sphagnum spp.), the ecosystem's key species. Yet, the frequency of such rewetting required for it to be effective remains unknown. We experimentally assessed the importance of precipitation frequency for Sphagnum water supply and carbon uptake during a stepwise decrease in water tables in a growth chamber. CO2 exchange and the water balance were measured for intact cores of three peatmoss species (Sphagnum majus, Sphagnum balticum and Sphagnum fuscum) representative of three hydrologically distinct peatland microhabitats (hollow, lawn and hummock) and expected to differ in their water table-precipitation relationships. Precipitation contributed significantly to peatmoss water supply when the water table was deep, demonstrating the importance of precipitation during drought. The ability to exploit transient resources was species-specific; S. fuscum carbon uptake increased linearly with precipitation frequency for deep water tables, whereas carbon uptake by S. balticum and S. majus was depressed at intermediate precipitation frequencies. Our results highlight an important role for precipitation in carbon uptake by peatmosses. Yet, the potential to moderate the impact of drought is species-specific and dependent on the temporal distribution of precipitation.

  2. Determination of the δ13C of dissolved inorganic carbon in water; RSIL lab code 1710

    USGS Publications Warehouse

    Singleton, Glenda L.; Revesz, Kinga; Coplen, Tyler B.

    2012-01-01

    The purpose of the Reston Stable Isotope Laboratory (RSIL) lab code 1710 is to present a method to determine the δ13C of dissolved inorganic carbon (DIC) of water. The DIC of water is precipitated using ammoniacal strontium chloride (SrCl2) solution to form strontium carbonate (SrCO3). The δ13C is analyzed by reacting SrCO3 with 100-percent phosphoric acid (H3PO4) to liberate carbon quantitatively as carbon dioxide (CO2), which is collected, purified by vacuum sublimation, and analyzed by dual inlet isotope-ratio mass spectrometry (DI-IRMS). The DI-IRMS is a DuPont double-focusing mass spectrometer. One ion beam passes through a slit in a forward collector and is collected in the rear collector. The other measurable ion beams are collected in the front collector. By changing the ion-accelerating voltage under computer control, the instrument is capable of measuring mass/charge (m/z) 45 or 46 in the rear collector and m/z 44 and 46 or 44 and 45, respectively, in the front collector. The ion beams from these m/z values are as follows: m/z 44 = CO2 = 12C16O16O, m/z 45 = CO2 = 13C16O16O primarily, and m/z 46 = CO2 = 12C16O18O primarily. The data acquisition and control software calculates δ13C values.

  3. Dynamics of soil organic and inorganic carbon in the cropland of upper Yellow River Delta, China

    PubMed Central

    Guo, Yang; Wang, Xiujun; Li, Xianglan; Wang, Jiaping; Xu, Minggang; Li, Dongwei

    2016-01-01

    Soil inorganic carbon (SIC) and organic carbon (SOC) are important carbon reservoirs in terrestrial ecosystems. However, little attention was paid to SIC dynamics in cropland. We conducted a survey in the upper Yellow River Delta of North China Plain. We collected 155 soil samples from 31 profiles, and measured SOC, SIC and soluble Ca2+ and Mg2+ contents. Our results showed that mean SOC content decreased from 9.30 g kg−1 near the surface to 2.36 g kg−1 in 80–100 cm whereas mean SIC content increased from 10.48 to 12.72 g kg−1. On average, SOC and SIC stocks over 0–100 cm were 5.73 kg C m−2 and 16.89 kg C m−2, respectively. There was a significantly positive correlation (r = 0.88, P < 0.001) between SOC and SIC in the cropland. We also found that SIC had a significantly positive correlation with both soluble Ca2+ (r = 0.57, P < 0.01) and Mg2+ (r = 0.43, P < 0.05). Our study suggested that increasing SOC might lead to an increase in SIC stocks in the cropland of North China Plain. This study highlights the importance of SIC in the carbon cycle of China’s semi-arid region. PMID:27782204

  4. Tracing source, mixing and uptaking processes of carbon in an epikarst spring-pond system in southeastern Guizhou of China by carbon isotopes (13C-14C)

    NASA Astrophysics Data System (ADS)

    Zhao, M.; Chen, B.; Liu, Z.; Li, H. C.; Yang, R.

    2015-12-01

    δ13C and Δ14C of dissolved inorganic carbon (DIC), particulate organic carbon (POC) and aquatic plants from a karst spring and two spring-fed ponds in Laqiao, Maolan County, Guizhou Province in January, July and October of 2013 were measured to understand the roles of aquatic photosynthesis through DIC uptake in karst surface waters. The mean Δ14C and δ13C values of DIC for the spring pool, midstream and downstream ponds are -60.6±26.3‰ and -13.53±1.97‰, -62.8±62.9‰ and -11.72±2.72‰, and -54.2±56.5‰ and -9.40±2.03‰, respectively. Both Δ14C and δ13C show seasonal variations, with lower Δ14C values but heavier δ13C values in dry season and vice versa in summer rainy season. This observation indicates that (1) the main carbon source of the spring DIC is from limestone bedrock dissolution and soil CO2 with higher contribution in summer due to higher productivity; and (2) 13C and 14C have different behaviors during DIC uptake by aquatic plants and during CO2 exchange between DIC and the atmospheric CO2. Biological uptake of CO2 will not affect the Δ14C of DIC, but lead to δ13CDIC enrichment. CO2 exchange between DIC and the atmospheric CO2 should elevate both the Δ14C and δ13C of DIC. In Laqiao spring-pond system, it seems that the effect of biological uptake on the Δ14C and δ13C of DIC is much stronger than that of CO2 exchange with the atmosphere. The mean Δ14C values of POC from the spring pool, midstream and downstream ponds are -308.1 ±64.3‰, -164.4±84.4‰ and -195.1±108.5‰, respectively, indicating mixture of aquatic algae and detrital particle (clay and dust). More aquatic algae were formed in the stream ponds especially in the summer. SEM results of the POC samples support this conclusion. Furthermore, the Δ14C values of the submerged aquatic plants range from -200.0‰ to -51.3 ‰ and were similar to those of the DIC, indicating that the aquatic plants used DIC for photosynthesis. The Δ14C value of an emergent plant

  5. Southern Ocean heat and carbon uptake: mechanisms, recent trends, and future changes

    NASA Astrophysics Data System (ADS)

    Froelicher, T. L.

    2015-12-01

    The Southern Ocean's dominant influence on the global heat balance and nutrient and carbon cycles stems from the fact that it is the primary gateway through which Earth's cold, centuries old and nutrient rich deep and bottom waters interact with the atmosphere. The westerly winds in the Southern Hemisphere drive a strongly divergent surface flow that draws up water from below in a wide ring circling the Antarctic continent. In the first part of the talk, we assess the uptake, transport, and storage of oceanic anthropogenic carbon and heat in the Southern Ocean over the period 1861-2005 in a new set of carbon-climate Earth System Models. Simulations show that the Southern Ocean south of 30°S, covering only 30% of the global surface ocean area, accounts for more than 40% of global anthropogenic carbon uptake. Furthermore, the Southern Ocean takes up three quarters of the total excess heat generated by the increasing levels of greenhouse gases in the atmosphere. Anthropogenic carbon and heat storage show a common broad-scale pattern of change, but ocean heat storage is more structured than ocean carbon storage suggesting that different mechanisms are important. The Southern Ocean, however, remains the region where models differ the most in the representation of anthropogenic carbon and, in particular, heat uptake. While the Southern Ocean carbon uptake has increased considerably in recent decades, as expected based on the substantial increase in atmospheric CO2, there is considerable concern that this sink will saturate or even reverse in response to warming, changing ocean circulation and chemistry. In the second part of the talk, novel multi-millennial global warming simulations with a comprehensive Earth System Model under a 1% yr-1 atmospheric CO2 increase to 2xCO2 and constant forcing thereafter scenario will be used to explore future long-term changes in the Southern Ocean carbon uptake. We show that after full equilibration of the model with doubling of

  6. Nitrogen feedbacks increase future terrestrial ecosystem carbon uptake in an individual-based dynamic vegetation model

    NASA Astrophysics Data System (ADS)

    Wårlind, D.; Smith, B.; Hickler, T.; Arneth, A.

    2014-11-01

    Recently a considerable amount of effort has been put into quantifying how interactions of the carbon and nitrogen cycle affect future terrestrial carbon sinks. Dynamic vegetation models, representing the nitrogen cycle with varying degree of complexity, have shown diverging constraints of nitrogen dynamics on future carbon sequestration. In this study, we use LPJ-GUESS, a dynamic vegetation model employing a detailed individual- and patch-based representation of vegetation dynamics, to evaluate how population dynamics and resource competition between plant functional types, combined with nitrogen dynamics, have influenced the terrestrial carbon storage in the past and to investigate how terrestrial carbon and nitrogen dynamics might change in the future (1850 to 2100; one representative "business-as-usual" climate scenario). Single-factor model experiments of CO2 fertilisation and climate change show generally similar directions of the responses of C-N interactions, compared to the C-only version of the model as documented in previous studies using other global models. Under an RCP 8.5 scenario, nitrogen limitation suppresses potential CO2 fertilisation, reducing the cumulative net ecosystem carbon uptake between 1850 and 2100 by 61%, and soil warming-induced increase in nitrogen mineralisation reduces terrestrial carbon loss by 31%. When environmental changes are considered conjointly, carbon sequestration is limited by nitrogen dynamics up to the present. However, during the 21st century, nitrogen dynamics induce a net increase in carbon sequestration, resulting in an overall larger carbon uptake of 17% over the full period. This contrasts with previous results with other global models that have shown an 8 to 37% decrease in carbon uptake relative to modern baseline conditions. Implications for the plausibility of earlier projections of future terrestrial C dynamics based on C-only models are discussed.

  7. Nitrogen feedbacks increase future terrestrial ecosystem carbon uptake in an individual-based dynamic vegetation model

    NASA Astrophysics Data System (ADS)

    Wårlind, D.; Smith, B.; Hickler, T.; Arneth, A.

    2014-01-01

    Recently a considerable amount of effort has been put into quantifying how interactions of the carbon and nitrogen cycle affect future terrestrial carbon sinks. Dynamic vegetation models, representing the nitrogen cycle with varying degree of complexity, have shown diverging constraints of nitrogen dynamics on future carbon sequestration. In this study, we use the dynamic vegetation model LPJ-GUESS to evaluate how population dynamics and resource competition between plant functional types, combined with nitrogen dynamics, have influenced the terrestrial carbon storage in the past and to investigate how terrestrial carbon and nitrogen dynamics might change in the future (1850 to 2100; one exemplary "business-as-usual" climate scenario). Single factor model experiments of CO2 fertilisation and climate change show generally similar directions of the responses of C-N interactions, compared to the C-only version of the model, as documented in previous studies. Under a RCP 8.5 scenario, nitrogen limitation suppresses potential CO2 fertilisation, reducing the cumulative net ecosystem carbon uptake between 1850 and 2100 by 61%, and soil warming-induced increase in nitrogen mineralisation reduces terrestrial carbon loss by 31%. When environmental changes are considered conjointly, carbon sequestration is limited by nitrogen dynamics until present. However, during the 21st century nitrogen dynamics induce a net increase in carbon sequestration, resulting in an overall larger carbon uptake of 17% over the full period. This contradicts earlier model results that showed an 8 to 37% decrease in carbon uptake, questioning the often stated assumption that projections of future terrestrial C dynamics from C-only models are too optimistic.

  8. Determination of the origin of dissolved inorganic carbon in groundwater around a reclaimed landfill in Otwock using stable carbon isotopes.

    PubMed

    Porowska, Dorota

    2015-05-01

    Chemical and isotopic analyses of groundwater from piezometers located around a reclaimed landfill in Otwock (Poland) were performed in order to trace the origin of dissolved inorganic carbon (DIC) in the groundwater. Due to differences in the isotopic composition of carbon from different sources, an analysis of stable carbon isotopes in the groundwater, together with the Keeling plot approach and a two-component mixing model allow us to evaluate the relative contributions of carbon from these sources in the groundwater. In the natural (background) groundwater, DIC concentrations and the isotopic composition of DIC (δ(13)CDIC) comes from two sources: decomposition of organic matter and carbonate dissolution within the aquifer sediments, whereas in the leachate-contaminated groundwater, DIC concentrations and δ(13)CDIC values depend on the degradation of organic matter within the aquifer sediments and biodegradation of organic matter stored in the landfill. From the mixing model, about 4-54% of the DIC pool is derived from organic matter degradation and 96-46% from carbonate dissolution in natural conditions. In the leachate-contaminated groundwater, about 20-53% of the DIC is derived from organic matter degradation of natural origin and 80-47% from biodegradation of organic matter stored in the landfill. Partial pressure of CO2 (P CO2) was generally above the atmospheric, hence atmospheric CO2 as a source of carbon in DIC pool was negligible in the aquifer. P CO2 values in the aquifer in Otwock were always one to two orders of magnitude above the atmospheric P CO2, and thus CO2 escaped directly into the vadose zone.

  9. Effect of Nutrient/Carbon Supplements on Biological Phosphate and Nitrate Uptake by Protozoan Isolates

    NASA Astrophysics Data System (ADS)

    Akpor, O. B.; Momba, M. N. B.; Okonkwo, J.

    This study was aimed at investigating the effect of nine different nutrient/carbon supplements in mixed liquor on nutrient uptake ability of three wastewater protozoan isolates, which have previously been screened for phosphate and nitrate uptake efficiency. The results revealed that over 50% of phosphate was removed in the presence of sodium acetate, glucose or sucrose. Similarly, nitrate uptake of over 60% was observed in the presence of sodium acetate, sodium succinate, glucose or sucrose. These trends were common in all the isolates. Chemical Oxygen Demand (COD) removal in the mixed liquor was only found to be significantly removed in mixed liquors that were supplemented with glucose, sucrose or sodium succinate. In the presence of sodium acetate, COD was observed to increase. The findings of this investigation have revealed that nutrient uptake and COD removal by the test protozoan isolates may be dependent primarily on the initial nutrient supplement in mixed liquor.

  10. Deuterium Uptake in Magnetic-Fusion Devices with Lithium-Conditioned Carbon Walls

    SciTech Connect

    Krstic, Predrag S.; Allain, J. P.; Taylor, C. N.; Dadras, J.; Morokuma, K.; Jakowski, J.; Allouche, A.; Skinner, C. H.

    2013-01-01

    Lithium wall conditioning has lowered hydrogenic recycling and dramatically improved plasma performance in many magnetic-fusion devices. In this Letter, we report quantum-classical atomistic simulations and laboratory experiments that elucidate the roles of lithium and oxygen in the uptake of hydrogen in amorphous carbon. Surprisingly, we show that lithium creates a high oxygen concentration on a carbon surface when bombarded by deuterium. Furthermore, surface oxygen, rather than lithium, plays the key role in trapping hydrogen.

  11. Oceanic carbon dioxide uptake in a model of century-scale global warming

    SciTech Connect

    Sarmiento, J.L.; Le Quere, C.

    1996-11-22

    In a model of ocean-atmosphere interaction that excluded biological processes, the oceanic uptake of atmospheric carbon dioxide (CO{sub 2}) was substantially reduced in scenarios involving global warming relative to control scenarios. The primary reason for the reduced uptake was the weakening or collapse of the ocean thermohaline circulation. Such a large reduction in this ocean uptake would have a major impact o the future growth rate of atmospheric CO{sub 2}. Model simulations that include a simple representation of biological processes show a potentially large offsetting effect resulting from the downward flux of biogenic carbon. However, the magnitude of the offset is difficult to quantify with present knowledge. 19 refs., 3 figs., 2 tabs.

  12. Direct uptake of organic carbon by grass roots and allocation in leaves and phytoliths: 13C labeling evidence

    NASA Astrophysics Data System (ADS)

    Alexandre, A.; Balesdent, J.; Cazevieille, P.; Chevassus-Rosset, C.; Signoret, P.; Mazur, J.-C.; Harutyunyan, A.; Doelsch, E.; Basile-Doelsch, I.; Miche, H.; Santos, G. M.

    2015-12-01

    In the rhizosphere, the uptake of low molecular weight carbon (C) and nitrogen (N) by plant roots has been well documented. While organic N uptake relatively to total uptake is important, organic C uptake is supposed to be low relatively to the plant's C budget. Recently, radiocarbon analyses demonstrated that a fraction of C from the soil was occluded in amorphous silica micrometric particles that precipitate in plant cells (phytoliths). Here, we investigated whether and in which extent organic C absorbed by grass roots, under the form of either intact amino acids (AAs) or microbial metabolites, can feed the organic C occluded in phytoliths. For this purpose we added 13C- and 15N-labeled AAs to the silicon-rich hydroponic solution of the grass Festuca arundinacea. The experiment was designed to prevent C leakage from the labeled nutritive solution to the chamber atmosphere. After 14 days of growth, the 13C and 15N enrichments (13C-excess and 15N-excess) in the roots, stems and leaves, and phytoliths, as well as the 13C-excess in AAs extracted from roots and stems and leaves, were quantified relatively to a control experiment in which no labelled AAs were added. The net uptake of 13C derived from the labeled AAs supplied to the nutritive solution (AA-13C) by Festuca arundinacea represented 4.5 % of the total AA-13C supply. AA-13C fixed in the plant represented only 0.13 % of total C. However, the experimental conditions may have underestimated the extent of the process under natural and field conditions. Previous studies showed that 15N and 13C can be absorbed by the roots in several organic and inorganic forms. In the present experiment, the fact that phenylalanine and methionine, that were supplied in high amount to the nutritive solution, were more 13C-enriched than other AAs in the roots and stems and leaves strongly suggested that part of AA-13C was absorbed and translocated in its original AA form. The concentration of AA-13C represented only 0.15 % of the

  13. Estimating global carbon uptake by lichens and bryophytes with a process-based model

    NASA Astrophysics Data System (ADS)

    Porada, P.; Weber, B.; Elbert, W.; Pöschl, U.; Kleidon, A.

    2013-02-01

    Lichens and bryophytes are abundant globally and they may even form the dominant autotrophs in (sub)polar ecosystems, in deserts and at high altitudes. Moreover, they can be found in large amounts as epiphytes in old-growth forests. Here, we present the first process-based model which estimates the net carbon uptake by these organisms at the global scale, thus assessing their significance for biogeochemical cycles. The model uses gridded climate data and key properties of the habitat (e.g. disturbance intervals) to predict processes which control net carbon uptake, namely photosynthesis, respiration, water uptake and evaporation. It relies on equations used in many dynamical vegetation models, which are combined with concepts specific to lichens and bryophytes, such as poikilohydry or the effect of water content on CO2 diffusivity. To incorporate the great functional variation of lichens and bryophytes at the global scale, the model parameters are characterised by broad ranges of possible values instead of a single, globally uniform value. The predicted terrestrial net carbon uptake of 0.34 to 3.3 (Gt C) yr-1 and global patterns of productivity are in accordance with empirically-derived estimates. Considering that the assimilated carbon can be invested in processes such as weathering or nitrogen fixation, lichens and bryophytes may play a significant role in biogeochemical cycles.

  14. Estimating global carbon uptake by lichens and bryophytes with a process-based model

    NASA Astrophysics Data System (ADS)

    Porada, P.; Weber, B.; Elbert, W.; Pöschl, U.; Kleidon, A.

    2013-11-01

    Lichens and bryophytes are abundant globally and they may even form the dominant autotrophs in (sub)polar ecosystems, in deserts and at high altitudes. Moreover, they can be found in large amounts as epiphytes in old-growth forests. Here, we present the first process-based model which estimates the net carbon uptake by these organisms at the global scale, thus assessing their significance for biogeochemical cycles. The model uses gridded climate data and key properties of the habitat (e.g. disturbance intervals) to predict processes which control net carbon uptake, namely photosynthesis, respiration, water uptake and evaporation. It relies on equations used in many dynamical vegetation models, which are combined with concepts specific to lichens and bryophytes, such as poikilohydry or the effect of water content on CO2 diffusivity. To incorporate the great functional variation of lichens and bryophytes at the global scale, the model parameters are characterised by broad ranges of possible values instead of a single, globally uniform value. The predicted terrestrial net uptake of 0.34 to 3.3 Gt yr-1 of carbon and global patterns of productivity are in accordance with empirically-derived estimates. Considering that the assimilated carbon can be invested in processes such as weathering or nitrogen fixation, lichens and bryophytes may play a significant role in biogeochemical cycles.

  15. Geochemistry of dissolved inorganic carbon in a Coastal Plain aquifer. 2. Modeling carbon sources, sinks, and δ13C evolution

    USGS Publications Warehouse

    McMahon, Peter B.; Chapelle, Francis H.

    1991-01-01

    Stable isotope data for dissolved inorganic carbon (DIC), carbonate shell material and cements, and microbial CO2 were combined with organic and inorganic chemical data from aquifer and confining-bed pore waters to construct geochemical reaction models along a flowpath in the Black Creek aquifer of South Carolina. Carbon-isotope fractionation between DIC and precipitating cements was treated as a Rayleigh distillation process. Organic matter oxidation was coupled to microbial fermentation and sulfate reduction. All reaction models reproduced the observed chemical and isotopic compositions of final waters. However, model 1, in which all sources of carbon and electron-acceptors were assumed to be internal to the aquifer, was invalidated owing to the large ratio of fermentation CO2 to respiration CO2 predicted by the model (5–49) compared with measured ratios (two or less). In model 2, this ratio was reduced by assuming that confining beds adjacent to the aquifer act as sources of dissolved organic carbon and sulfate. This assumption was based on measured high concentrations of dissolved organic acids and sulfate in confining-bed pore waters (60–100 μM and 100–380 μM, respectively) relative to aquifer pore waters (from less than 30 μM and 2–80 μM, respectively). Sodium was chosen as the companion ion to organic-acid and sulfate transport from confining beds because it is the predominant cation in confining-bed pore waters. As a result, excessive amounts of Na-for-Ca ion exchange and calcite precipitation (three to four times more cement than observed in the aquifer) were required by model 2 to achieve mass and isotope balance of final water. For this reason, model 2 was invalidated. Agreement between model-predicted and measured amounts of carbonate cement and ratios of fermentation CO2 to respiration CO2 were obtained in a reaction model that assumed confining beds act as sources of DIC, as well as organic acids and sulfate. This assumption was

  16. Variations in phytodetritus derived carbon uptake of the intertidal foraminifera Ammonia tepida and Haynesina germanica

    NASA Astrophysics Data System (ADS)

    Wukovits, Julia; Bukenberger, Patrick; Enge, Annekatrin; Wanek, Wolfgang; Watzka, Margarete; Heinz, Petra

    2016-04-01

    Phytodetritus represents a major component of particulate organic carbon in intertidal mudflats. Estuaries and tidal currents yield an extensive amount of these particles that display a substantial nutrient source for littoral food webs. For benthic foraminifera, a group of marine protists, phytodetritus serves as the main food source. Foraminifera are considered to play a significant role in marine carbon turnover processes and show seasonally very high population densities in intertidal sediments. Therefore, it is important to gather explicit data about the specific carbon uptake behavior of intertidal foraminiferal species. In this study, laboratory feeding experiments were carried out to observe phytodetrital carbon uptake of foraminiferal specimen collected in the German Wadden Sea. Artificially produced phytodetritus was labelled with 13C to follow carbon ingestion into foraminiferal cytoplasm over time at different simulated conditions. The experiments were performed with monocultures under exclusion of other meiofauna. Chlorophyte detritus (Dunaliella tertiolecta) was fed to the two common species Ammonia tepida and Haynesina germanica. Ammonia tepida showed a significantly higher affinity to this food source than H. germanica. Testing the effect of temperature revealed a significant decrease of carbon ingestion with increasing temperature in H. germanica. Observations focusing on A. tepida showed a rising phytodetrital carbon content in the biomass of juvenile individuals in contrast to adult foraminifera. In general, carbon uptake reaches saturation levels a few hours after food supply. Furthermore, A. tepida benefits from constant availability of fresh food rather than from a high amount of phytodetritus derived from a single food pulse. Our investigations showed that the foraminiferal impact on intertidal processing of phytodetrital carbon sources is species specific, temperature related and depends on developmental stage and input dynamics

  17. Laboratory appraisal of organic carbon changes in mixtures made with different inorganic wastes.

    PubMed

    Arbestain, M Camps; Ibargoitia, M L; Madinabeitia, Z; Gil, M V; Virgel, S; Morán, A; Pereira, R Calvelo; Macías, F

    2009-12-01

    Mixtures of organic and inorganic wastes were incubated to examine the changes in organic C (OC) contents. An anaerobic sludge and a CaO-treated aerobic sludge, with OC concentrations of 235 and 129 gkg(-1), were used. The inorganic wastes used - referred to as "conditioners" - were shot blasting scrap, fettling, Linz-Donawitz slag, foundry sand (FS), and fly ash from wood bark combustion (FA). The total OC (TOC) and KMnO(4)(-) oxidized OC were determined. DTA-TGA profiles and FTIR spectra were also obtained. Mixtures made with the FS contained significantly lower (P<0.05) amounts of TOC (45 gkg(-1)) than the rest of mixtures, which was attributed to the non-existence of reactive surfaces in the conditioner and the increased aeration induced by this material. Those made with FA contained significantly higher (P<0.05) amounts of TOC (170 gkg(-1)), which was attributed to: (i) the addition of an extra source of C - black carbon (BC) - in the FA, and (ii) the inhibition of mineralization from the compounds present in this conditioner (e.g., amorphous aluminosilicates, BC). The results highlight the importance of the characteristics of the conditioners on the fate of the OM originating from the sludges. PMID:19632821

  18. Recent Advances in Inorganic Heterogeneous Electrocatalysts for Reduction of Carbon Dioxide.

    PubMed

    Zhu, Dong Dong; Liu, Jin Long; Qiao, Shi Zhang

    2016-05-01

    In view of the climate changes caused by the continuously rising levels of atmospheric CO2 , advanced technologies associated with CO2 conversion are highly desirable. In recent decades, electrochemical reduction of CO2 has been extensively studied since it can reduce CO2 to value-added chemicals and fuels. Considering the sluggish reaction kinetics of the CO2 molecule, efficient and robust electrocatalysts are required to promote this conversion reaction. Here, recent progress and opportunities in inorganic heterogeneous electrocatalysts for CO2 reduction are discussed, from the viewpoint of both experimental and computational aspects. Based on elemental composition, the inorganic catalysts presented here are classified into four groups: metals, transition-metal oxides, transition-metal chalcogenides, and carbon-based materials. However, despite encouraging accomplishments made in this area, substantial advances in CO2 electrolysis are still needed to meet the criteria for practical applications. Therefore, in the last part, several promising strategies, including surface engineering, chemical modification, nanostructured catalysts, and composite materials, are proposed to facilitate the future development of CO2 electroreduction. PMID:26996295

  19. The Impact of Diffuse Light on Terrestrial Carbon Uptake

    NASA Astrophysics Data System (ADS)

    Cheng, S. J.; Bohrer, G.; Steiner, A. L.; Nadelhoffer, K. J.; Fotis, A.

    2013-12-01

    Clouds and aerosols influence the strength of the terrestrial carbon sink by changing environmental conditions that control rates of photosynthesis and ecosystem gross primary productivity (GPP). Although clouds and aerosols can reduce GPP by lowering the amount of light entering ecosystems, they also create scattered, diffuse light that can penetrate deeper into plant canopies. This can potentially increase lower-canopy light absorption and photosynthesis, sometimes enough to compensate for any decreases in upper canopy photosynthesis under reduced light levels. To identify how strongly diffuse light influences ecosystem GPP, we analyze the relationship between diffuse light and GPP at Ameriflux sites with at least 3 years of diffuse photosynthetically active radiation (PAR) and GPP data. We also compare the effects of diffuse light across deciduous broadleaf forests, mixed forests, croplands, and grasslands. Preliminary results show a positive relationship between diffuse PAR and GPP, with the magnitude of the relationship dependent on zenith angle and vegetation type. The relationship remains positive for low zenith angles after taking into account the effect of direct light availability on GPP. Additionally, we use NASA Moderate Resolution Imaging Spectroradiometer (MODIS) data to analyze how the diffuse light effect on GPP changes under high cloud and aerosol optical depths. Quantifying the effects of diffuse light on GPP for different ecosystem types and determining how they change under different atmospheric conditions will expand our understanding of how changing cloud and aerosol conditions may alter local ecosystem carbon cycling and the magnitude of the terrestrial carbon sink.

  20. Export of inorganic carbon from two Southeast Asian mangrove forests to adjacent estuaries as estimated by the stable isotope composition of dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Miyajima, Toshihiro; Tsuboi, Yoshie; Tanaka, Yoshiyuki; Koike, Isao

    2009-03-01

    The influence of mangrove forests on the dynamics of dissolved inorganic carbon (DIC) in tropical estuaries was estimated quantitatively using newly developed isotope (δ13C) mass balance models that take into account both the input of DIC and the air-water exchange of CO2. To this aim, the concentration and δ13C of DIC were determined across the salinity gradient of two river estuaries facing the Andaman Sea. The longitudinal distribution of DIC could be explained by conservative mixing of the river water and seawater DIC in the low-discharge period (March 2006), while a net accumulation of DIC up to 190 μmol L-1 was observed in the high-discharge period (December 2006). δ13CDIC values were generally lower than expected for the mixing of the river water and seawater DIC, due to the 13C-depleted DIC inputs from the riverside mangroves. The concentration of mangrove-derived DIC in the estuarine waters was estimated by the proposed models to be as much as 856 μmol L-1, and was higher during the low-discharge period. This suggested that the mangroves exported much higher levels of DIC to the estuaries than indicated by the net accumulation of DIC. Our results confirm that mangroves function as an effective CO2 pump that takes CO2 from the atmosphere and releases it into estuarine waters. This study illustrates that δ13CDIC is a sensitive and quantitative indicator for DIC emission to the sea from coastal wetlands including mangroves.

  1. Preliminary Study: Application of Off-Axis ICOS to Determine Stable Carbon Isotope in Dissolved Inorganic Carbon

    NASA Astrophysics Data System (ADS)

    Kim, Y. T.; Lee, J. M.; Hwang, J. H.; Piao, J.; Woo, N. C.

    2015-12-01

    CO2 is one of the major causes for global climate change. Because stable carbon isotope ratio is used to trace carbon source, several analytical techniques likes IRMS (Isotope Ratio Mass Spectrometry) and LAS (Laser Absorption Spectrometry) were extensively used. Off-axis ICOS, a kind of LAS, has merits on long-term stability and field application, therefore it is widely being used in CCS (Carbon Capture and Storage) field. The aim of this study is to extend the application scope of OA-ICOS to determine dissolved inorganic carbon (DIC). Because OA-ICOS showed dependence of δ13C on CO2 concentration, data processing is required. We tested CO2 Carbon Isotope Analyzer (CCIA-36-EP, Los Gatos Research) with both reference gas (δ13C= -28.28‰) and aqueous solutions prepared by dissolving sodium bicarbonate standards (δ13C= -12.26‰ and +3.96‰). The differences of δ13C between reference and measurement values are plotted by CO2 concentrations, then compared. At first, we checked the similarity between our curve pattern for reference gas and Guillon's research (δ13C= -43.99‰) by other Analyzer. To analyze aqueous samples, more errors can be caused than gas analysis. The carbon isotope fractionation occurs during dissolving standard reagents and extracting DIC as CO2 gas form. This effect is mixed with CO2 concentration dependence effect, therefore the curve patterns are different with that for reference gas. Our experiments are done for various δ13C values. It could be an important point to use OA-ICOS to analyze DIC, too.

  2. Remote Sensing of Evapotranspiration and Carbon Uptake at Harvard Forest

    NASA Technical Reports Server (NTRS)

    Min, Qilong; Lin, Bing

    2005-01-01

    A land surface vegetation index, defined as the difference of microwave land surface emissivity at 19 and 37 GHz, was calculated for a heavily forested area in north central Massachusetts. The microwave emissivity difference vegetation index (EDVI) was estimated from satellite SSM/I measurements at the defined wavelengths and used to estimate land surface turbulent fluxes. Narrowband visible and infrared measurements and broadband solar radiation observations were used in the EDVI retrievals and turbulent flux estimations. The EDVI values represent physical properties of crown vegetation such as vegetation water content of crown canopies. The collocated land surface turbulent and radiative fluxes were empirically linked together by the EDVI values. The EDVI values are statistically sensitive to evapotranspiration fractions (EF) with a correlation coefficient (R) greater than 0.79 under all-sky conditions. For clear skies, EDVI estimates exhibit a stronger relationship with EF than normalized difference vegetation index (NDVI). Furthermore, the products of EDVI and input energy (solar and photosynthetically-active radiation) are statistically significantly correlated to evapotranspiration (R=0.95) and CO2 uptake flux (R=0.74), respectively.

  3. Determination of the origin of dissolved inorganic carbon in groundwater around a reclaimed landfill in Otwock using stable carbon isotopes

    SciTech Connect

    Porowska, Dorota

    2015-05-15

    Highlights: • Research showed the origin of DIC in the groundwater around a reclaimed landfill. • Carbon isotope was used to evaluate the contributions of carbon from different sources. • The leachate-contaminated water was isotopically distinct from the natural groundwater. • DIC in the natural groundwater comes from organic matter and dissolution of carbonates. • In the contaminated water, DIC comes from organic matter in the aquifer and landfill. - Abstract: Chemical and isotopic analyses of groundwater from piezometers located around a reclaimed landfill in Otwock (Poland) were performed in order to trace the origin of dissolved inorganic carbon (DIC) in the groundwater. Due to differences in the isotopic composition of carbon from different sources, an analysis of stable carbon isotopes in the groundwater, together with the Keeling plot approach and a two-component mixing model allow us to evaluate the relative contributions of carbon from these sources in the groundwater. In the natural (background) groundwater, DIC concentrations and the isotopic composition of DIC (δ{sup 13}C{sub DIC}) comes from two sources: decomposition of organic matter and carbonate dissolution within the aquifer sediments, whereas in the leachate-contaminated groundwater, DIC concentrations and δ{sup 13}C{sub DIC} values depend on the degradation of organic matter within the aquifer sediments and biodegradation of organic matter stored in the landfill. From the mixing model, about 4–54% of the DIC pool is derived from organic matter degradation and 96–46% from carbonate dissolution in natural conditions. In the leachate-contaminated groundwater, about 20–53% of the DIC is derived from organic matter degradation of natural origin and 80–47% from biodegradation of organic matter stored in the landfill. Partial pressure of CO{sub 2} (P CO{sub 2}) was generally above the atmospheric, hence atmospheric CO{sub 2} as a source of carbon in DIC pool was negligible in the

  4. Benthic Primary Production in a Saltmarsh Pond: Insights from Fluxes of Dissolved Inorganic Carbon and Oxygen

    NASA Astrophysics Data System (ADS)

    Karolewski, J. S.; Stanley, R. H.; Howard, E. M.; Spivak, A. C.

    2014-12-01

    Salt marshes are important carbon sinks that exist at continental margins and act as mediators in the exchange of nutrients and carbon between terrestrial and marine environments. Within salt marshes, 10-20% of total surface area is covered by marshtop ponds. The fractional area of marshtop ponds is predicted to increase as sea level rises. Despite their potential importance, the balance between autotrophic and heterotrophic processes within such ponds remain poorly understood. To quantify the balance of metabolic fluxes within salt marsh ponds, chemical fluxes of dissolved inorganic carbon (DIC) and dissolved oxygen (DO) were measured in July, 2014 in benthic flux chambers inserted into a salt marsh pond in the Plum Island Estuary Long-Term Ecosystem Research (PIE-LTER) site. Light and dark chambers were used to enable separation of rates of photosynthesis and respiration. Separate chambers were used to enclose sediment covered by primarily benthic microalgae and primarily benthic macroalgae. Net ecosystem metabolism in the microalgae was ~10 and in the macroalgae ~15 mmol C/m2/hour. Respiration rates were ~10 mmol C/m2/ hour for both microalgae and macroalgae. The resulting fluxes of net ecosystem production in the ponds will be compared with overall marsh net ecosystem flux as measured by an eddy flux tower that was located 100 meters from the pond. Additionally, concurrent measurements of DIC and DO allow quantification of the C:O ratio during respiration (i.e. respiratory quotient) in this system.

  5. Lithium isotopes in foraminifera shells as a novel proxy for the ocean dissolved inorganic carbon (DIC)

    NASA Astrophysics Data System (ADS)

    Vigier, Nathalie; Rollion-Bard, Claire; Levenson, Yaël; Erez, Jonathan

    2015-01-01

    Past ocean pH and pCO2 are critical parameters for establishing relationships between Earth's climate and the carbon cycle. Previous pCO2 estimates are associated with large uncertainties and are debated. In this study, laboratory cultures of the foraminiferan genus Amphistegina were performed in order to examine the possible factors that control the Li isotope composition (δ7Li) of their shells. δ7Li is insensitive to temperature and pH variations but correlates positively with the Dissolved Inorganic Carbon (DIC) of seawater. Li/Ca ratio in the shells shows negative correlation with δ7Li, consistent with published data for planktonic foraminifera from core tops and from short periods during the Cenozoic. We propose that the sensitivity of δ7Li and Li/Ca ratio to DIC is a biological phenomenon and is related to biomineralization mechanisms in foraminifera. We used the published foraminiferal δ7Li records, and our experimental results, to determine the paleo-ocean DIC and pH for the last glacial-interglacial cycle. The results are consistent with published estimates of pH and pCO2 based on boron isotopes and ice cores. We suggest Li and its isotopes may serve as a new complementary proxy for the paleo-ocean carbonate chemistry.

  6. Tracing solid waste leachate in groundwater using δ13 C from dissolved inorganic carbon.

    PubMed

    Haarstad, Ketil; Mæhlum, Trond

    2013-01-01

    Tracers can be used to monitor emissions of leachate from landfills in order to detect hydrological pathways and to evaluate environmental pollution. We investigated the stable carbon isotope ratio (δ(13)C-Σ CO (2)) in dissolved inorganic carbon and tritium ((3)H) in water, in addition to the tracers of pollution commonly found in relatively high concentrations in leachate, such as chloride (Cl), organic matter (COD), nitrogen (total and NH(4)-N), iron (Fe), electrical conductivity (EC) and pH. The sampling was performed at seven landfills in the south-eastern part of Norway during a period of 5 years. The objective was to evaluate the potential for tracing leachate in the environment with emphasis on groundwater pollution. By measuring the δ(13)C-Σ CO (2) in leachates, groundwaters and surface waters, the influence of leachate can be identified. The value of δ(13)C-Σ CO (2) varied from-5.5 to 25.9 ‰ in leachate, from-25.4 to 14.7 ‰ in groundwater and from-19.7 to-13.1 ‰ in creeks. A comparison of the carbon isotope ratio with COD, EC and the concentrations of total and NH (4)-N, Cl and Fe showed that δ(13)C-Σ CO (2) is a good tracer for leachate due to higher sensitivity compared to other parameters. The mean concentrations of all the studied parameters were higher in the leachate samples; however, only the carbon isotope ratio showed significant differences between all the groups with strong and middle pollution and samples with low pollution, showing that it can be used as a convenient tracer for leachate in groundwater and surface water. The carbon isotope ratio showed strong correlation between nitrogen, EC and bicarbonate, but not with pH. Tritium was only sporadically found in measureable concentrations and is not considered as a suitable tracer at the sampled locations.

  7. Inorganic carbon in a high latitude estuary-fjord system in Canada's eastern Arctic

    NASA Astrophysics Data System (ADS)

    Turk, D.; Bedard, J. M.; Burt, W. J.; Vagle, S.; Thomas, H.; Azetsu-Scott, K.; McGillis, W. R.; Iverson, S. J.; Wallace, D. W. R.

    2016-09-01

    Rapidly changing conditions in the Arctic can have a significant impact on biogeochemical cycles and can be particularly important in high latitude estuary-fjord systems with abundant and diverse freshwater sources. This study provides a first look into the inorganic carbon system and its relation to freshwater sources in Cumberland Sound in the east coast of Baffin Island, Nunavut, Canada. These data contribute to the very limited set of inorganic carbon measurements in high latitude estuary-fjord systems. During the ice-free conditions in August 2011, the meteoric freshwater fractions (MW) in the upper 40 m ranged from 11 to 21% and no sea ice melt (SIM) was present in the Sound. Surface waters were undersaturated with pCO2 (260 and 300 μatm), and DIC and TA ranged between 1779 and 1966 μmol DIC kg-1, and 1922 and 2140 μmol TA kg-1, respectively. Aragonite saturation (ΩAr) state ranged from 1.9 in the surface to 1.4 in the subsurface waters. Data show decreasing TA and ΩAr with increasing MW fraction and suggest that Cumberland Sound waters would become aragonite undersaturated (ΩAr < 1) at MW = 0.37 (95% CI: 0.29 to 0.56). Estimated local δ18O (-19.2‰) and TA (174 μmol TA kg-1) end-members indicate MW was most likely a mixture of river water and glacial melt. In August 2012, MW fractions at the surface were between 8 and 11.5%, and SIM between 7 and 23%. Significant interannual variability of summertime SIM could potentially result in ΩAr undersaturation.

  8. Uptake of chloride and carbonate ions by calcium monosulfoaluminate hydrate

    SciTech Connect

    Mesbah, Adel; Cau-dit-Coumes, Celine; Frizon, Fabien

    2012-08-15

    Decommissioning of old nuclear reactors may produce waste streams containing chlorides and carbonates, including radioactive {sup 36}Cl{sup -} and {sup 14}CO{sub 3}{sup 2-}. Their insolubilization by calcium monosulfoaluminate hydrate was investigated. Carbonates were readily depleted from the solution, giving at thermodynamic equilibrium monocarboaluminate, monocarboaluminate + calcite, or calcite only, depending on the initial ratio between the anion and calcium monosulfoaluminate hydrate. Chloride ions reacted more slowly and were precipitated as Kuzel's salt, Kuzel's and Friedel's salts, or Friedel's salt only. Rietveld refinement of X-Ray powder diffraction patterns was successfully used to quantify the phase distributions, which were compared to thermodynamic calculations. Moreover, analysing the lattice parameters of Kuzel's salt as a function of its chloride content showed the occurrence of a restricted solid solution towards the sulfate side with general formula 3CaO{center_dot}Al{sub 2}O{sub 3}{center_dot}xCaCl{sub 2}{center_dot}(1 - x)CaSO{sub 4}{center_dot}(12 - 2x){center_dot}H{sub 2}O (0.36 {<=} x {<=} 0.50).

  9. Estimating the carbon budget and maximizing future carbon uptake for a temperate forest region in the U.S.

    PubMed Central

    2012-01-01

    Background Forests of the Midwest U.S. provide numerous ecosystem services. Two of these, carbon sequestration and wood production, are often portrayed as conflicting. Currently, carbon management and biofuel policies are being developed to reduce atmospheric CO2 and national dependence on foreign oil, and increase carbon storage in ecosystems. However, the biological and industrial forest carbon cycles are rarely studied in a whole-system structure. The forest system carbon balance is the difference between the biological (net ecosystem production) and industrial (net emissions from forest industry) forest carbon cycles, but to date this critical whole system analysis is lacking. This study presents a model of the forest system, uses it to compute the carbon balance, and outlines a methodology to maximize future carbon uptake in a managed forest region. Results We used a coupled forest ecosystem process and forest products life cycle inventory model for a regional temperate forest in the Midwestern U.S., and found the net system carbon balance for this 615,000 ha forest was positive (2.29 t C ha-1 yr-1). The industrial carbon budget was typically less than 10% of the biological system annually, and averaged averaged 0.082 t C ha-1 yr-1. Net C uptake over the next 100-years increased by 22% or 0.33 t C ha-1 yr-1 relative to the current harvest rate in the study region under the optized harvest regime. Conclusions The forest’s biological ecosystem current and future carbon uptake capacity is largely determined by forest harvest practices that occurred over a century ago, but we show an optimized harvesting strategy would increase future carbon sequestration, or wood production, by 20-30%, reduce long transportation chain emissions, and maintain many desirable stand structural attributes that are correlated to biodiversity. Our results for this forest region suggest that increasing harvest over the next 100 years increases the strength of

  10. Temperature responses of carbon monoxide and hydrogen uptake by vegetated and unvegetated volcanic cinders

    PubMed Central

    King, Caitlin E; King, Gary M

    2012-01-01

    Ecosystem succession on a large deposit of volcanic cinders emplaced on Kilauea Volcano in 1959 has resulted in a mosaic of closed-canopy forested patches and contiguous unvegetated patches. Unvegetated and unshaded surface cinders (Bare) experience substantial diurnal temperature oscillations ranging from moderate (16 °C) to extreme (55 °C) conditions. The surface material of adjacent vegetated patches (Canopy) experiences much smaller fluctuations (14–25 °C) due to shading. To determine whether surface material from these sites showed adaptations by carbon monoxide (CO) and hydrogen (H2) consumption to changes in ambient temperature regimes accompanying succession, we measured responses of CO and H2 uptake to short-term variations in temperature and long-term incubations at elevated temperature. Based on its broader temperature optimum and lower activation energy, Canopy H2 uptake was less sensitive than Bare H2 uptake to temperature changes. In contrast, Bare and Canopy CO uptake responded similarly to temperature during short-term incubations, indicating no differences in temperature sensitivity. However, during extended incubations at 55 °C, CO uptake increased for Canopy but not Bare material, which indicated that the former was capable of thermal adaptation. H2 uptake for material from both sites was completely inhibited at 55 °C throughout extended incubations. These results indicated that plant development during succession did not elicit differences in short-term temperature responses for Bare and Canopy CO uptake, in spite of previously reported differences in CO oxidizer community composition, and differences in average daily and extreme temperatures. Differences associated with vegetation due to succession did, however, lead to a notable capacity for thermophilic CO uptake by Canopy but not Bare material. PMID:22258097

  11. Intertidal salt marshes as an important source of inorganic carbon to the coastal ocean

    USGS Publications Warehouse

    Wang, Zhaohui Aleck; Kroeger, Kevin D.; Ganju, Neil K.; Gonneea, Meagan; Chu, Sophie N.

    2016-01-01

    Dynamic tidal export of dissolved inorganic carbon (DIC) to the coastal ocean from highly productive intertidal marshes and its effects on seawater carbonate chemistry are thoroughly evaluated. The study uses a comprehensive approach by combining tidal water sampling of CO2parameters across seasons, continuous in situ measurements of biogeochemically-relevant parameters and water fluxes, with high-resolution modeling in an intertidal salt marsh of the U.S. northeast region. Salt marshes can acidify and alkalize tidal water by injecting CO2 (DIC) and total alkalinity (TA). DIC and TA generation may also be decoupled due to differential effects of marsh aerobic and anaerobic respiration on DIC and TA. As marsh DIC is added to tidal water, the buffering capacity first decreases to a minimum and then increases quickly. Large additions of marsh DIC can result in higher buffering capacity in ebbing tide than incoming tide. Alkalization of tidal water, which mostly occurs in the summer due to anaerobic respiration, can further modify buffering capacity. Marsh exports of DIC and alkalinity may have complex implications for the future, more acidified ocean. Marsh DIC export exhibits high variability over tidal and seasonal cycles, which is modulated by both marsh DIC generation and by water fluxes. The marsh DIC export of 414 g C m−2 yr−1, based on high-resolution measurements and modeling, is more than twice the previous estimates. It is a major term in the marsh carbon budget and translates to one of the largest carbon fluxes along the U.S. East Coast.

  12. The Impact of Land Use Change on Primary Stream Organic and Inorganic Carbon Export

    NASA Astrophysics Data System (ADS)

    Kelsey, S. A.; Bauer, J. E.; Grottoli, A. G.; Huey Sanders, T. M.; Matsui, Y.

    2015-12-01

    Terrestrial land use may impact both the amounts of and characteristics of organic and inorganic carbon (OC and IC, respectively) entering aquatic ecosystems. Better understanding of how different land uses alter carbon characteristics and export fluxes from watersheds may lead to better management practices for retaining OC in terrestrial habitats and therefore mitigate CO2 emissions from freshwater ecosystems where terrestrial OC may be more rapidly respired. We examined the fluxes and δ13C and ∆14C signatures of dissolved IC (DIC), dissolved OC (DOC), and particulate OC (POC) exported from 6 watersheds with differing land use at the North Appalachian Experimental Watershed (NAEW) in Coshocton county in northeastern Ohio to assess whether differences in land use are related to variability in the export fluxes and isotopic characteristics of OC and IC pools. We used a Bayesian mixing model (MixSIR) to determine how the relative contributions of potential carbon sources to DIC, DOC, and POC change as a function of watershed land use. Mixing model results from each season were used to approximate relative annual contributions of potential sources to DIC, DOC, and POC export fluxes from each watershed. We found that agricultural land uses (i.e., corn, under both conventional till and no-till management) experienced the greatest degree of disturbance and had the greatest carbon export fluxes. However, the relative extent to which soil OC contributed to export fluxes compared to corn biomass varied as a function of tillage practices. In addition, nonparametric multidimensional scaling (NMDS), based on the δ13C and ∆14C data and mixing model results for DIC, DOC and POC export fluxes, separated non-corn watersheds into 2 further classes of disturbance: moderate disturbance (pasture and mixed land use) and low disturbance (forest). These findings suggest that land use has a measurable impact on the concentration and characteristics of watershed C export fluxes.

  13. Inorganic Carbon and pH in the Gulf of Mexico: Understanding the Deepwater Horizon Region

    NASA Astrophysics Data System (ADS)

    Young, J.; Yvon-Lewis, S. A.; Bianchi, T. S.; Shields, M. R.; Du, M.

    2014-12-01

    The breakdown and respiration of oil compounds may contribute to the dissolved inorganic carbon (DIC) pool and thus ocean acidification. The Gulf of Mexico (GOM) has an abundance of natural seeps as well as numerous man-made structures that could provide a source of hydrocarbons to the water column. Samples of seawater were collected on the first GISR (Gulf Integrated Spill Research) cruise (G01) during the first week of July 2012. This cruise covered an area of ~1360 km2 roughly centered on the site of the Deepwater Horizon disaster. Alkalinity profiles for the southeastern most stations indicate lower (~100 μmol/kg) alkalinities at depth when compared to other stations sampled. This results in calculated pHs that are ~0.5 units lower at depth than they are at the other stations. Another group of stations show increased DIC concentrations on the order of 100-150 μmol/kg higher than average at depths at 800 m and 1200 m leading to calculated pHs about 0.2 to 0.4 below average for those depths in all of the stations sampled. These features may or may not be persistent in this region, and the elevated DIC concentrations may be related to organic matter (petroleum or other) oxidation. Samples were collected from this same region 2 years later (June 2014) and the persistence of these features will be discussed in the context of linkages with organic carbon respiration and low pHs.

  14. Multidecadal change in the dissolved inorganic carbon in a long-term ocean state estimation

    NASA Astrophysics Data System (ADS)

    Doi, Toshimasa; Osafune, Satoshi; Sugiura, Nozomi; Kouketsu, Shinya; Murata, Akihiko; Masuda, Shuhei; Toyoda, Takahiro

    2015-12-01

    By using a four-dimensional variational data assimilation system capable of estimating physical and biogeochemical variables for the global ocean, we investigated multidecadal changes in the dissolved inorganic carbon (DIC) in the ocean. The system was newly constructed with a pelagic ecosystem model and an oceanic general circulation model to integrate available ocean observations obtained with a wide range of observation tools. The distribution of estimated DIC was by and large consistent with previous reports. We validated the changes in DIC along the World Ocean Circulation Experiment (WOCE) Hydrographic Program sections. The correlation coefficients of the modeled versus observed decadal difference patterns of DIC ranged from 0.25 to 0.51 in the Pacific Ocean, from 0.36 to 0.62 in the Atlantic Ocean, and from 0.23 to 0.57 in the Indian Ocean, and were significant at the 95% confidence level. Thus, at basin scale, the reproducibility of long-term climate change was similar. Estimation of vertical DIC fluxes in each basin showed that the fluxes changed on a multidecadal time scale in our system. These changes were possibly due to changes in the dynamical state of CO2 absorption and to changes in ocean circulation. Our integrated data set on the basis of a dynamically self-consistent ocean state is a promising tool for examining long-term changes in the ocean carbon cycle.

  15. Enhancing the adsorption of ionic liquids onto activated carbon by the addition of inorganic salts

    PubMed Central

    Neves, Catarina M. S. S.; Lemus, Jesús; Freire, Mara G.; Palomar, Jose; Coutinho, João A. P.

    2014-01-01

    Most ionic liquids (ILs) are either water soluble or present a non-negligible miscibility with water that may cause some harmful effects upon their release into the environment. Among other methods, adsorption of ILs onto activated carbon (AC) has shown to be an effective technique to remove these compounds from aqueous solutions. However, this method has proved to be viable only for hydrophobic ILs rather than for the hydrophilic that, being water soluble, have a larger tendency for contamination. In this context, an alternative approach using the salting-out ability of inorganic salts is here proposed to enhance the adsorption of hydrophilic ILs onto activated carbon. The effect of the concentrations of Na2SO4 on the adsorption of five ILs onto AC was investigated. A wide range of ILs that allow the inspection of the IL cation family (imidazolium- and pyridinium-based) and the anion nature (accounting for its hydrophilicity and fluorination) through the adsorption onto AC was studied. In general, it is shown that the use of Na2SO4 enhances the adsorption of ILs onto AC. In particular, this effect is highly relevant when dealing with hydrophilic ILs that are those that are actually poorly removed by AC. In addition, the COnductor like Screening MOdel for Real Solvents (COSMO-RS) was used aiming at complementing the experimental data obtained. This work contributes with the development of novel methods to remove ILs from water streams aiming at creating “greener” processes. PMID:25516713

  16. Microbial Group Specific Uptake Kinetics of Inorganic Phosphate and Adenosine-5′-Triphosphate (ATP) in the North Pacific Subtropical Gyre

    PubMed Central

    Björkman, Karin; Duhamel, Solange; Karl, David M.

    2012-01-01

    We investigated the concentration dependent uptake of inorganic phosphate (Pi) and adenosine-5′-triphosphate (ATP) in microbial populations in the North Pacific Subtropical Gyre (NPSG). We used radiotracers to measure substrate uptake into whole water communities, differentiated microbial size classes, and two flow sorted groups; Prochlorococcus (PRO) and non-pigmented bacteria (NPB). The Pi concentrations, uptake rates, and Pi pool turnover times (Tt) were (mean, ±SD); 54.9 ± 35.0 nmol L−1 (n = 22), 4.8 ± 1.9 nmol L−1 day−1 (n = 19), and 14.7 ± 10.2 days (n = 19), respectively. Pi uptake into >2 μm cells was on average 12 ± 7% (n = 15) of the total uptake. The kinetic response to Pi (10–500 nmol L−1) was small, indicating that the microorganisms were close to their maximum uptake velocity (Vmax). Vmax averaged 8.0 ± 3.6 nmol L−1 day−1 (n = 19) in the >0.2 μm group, with half saturation constants (Km) of 40 ± 28 nmol L−1 (n = 19). PRO had three times the cell specific Pi uptake rate of NPB, at ambient concentrations, but when adjusted to cells L−1 the rates were similar, and these two groups were equally competitive for Pi. The Tt of γ-P-ATP in the >0.2 μm group were shorter than for the Pi pool (4.4 ± 1.0 days; n = 6), but this difference diminished in the larger size classes. The kinetic response to ATP was large in the >0.2 μm class with Vmax exceeding the rates at ambient concentrations (mean 62 ± 27 times; n = 6) with a mean Vmax for γ-P-ATP of 2.8 ± 1.0 nmol L−1 day−1, and Km at 11.5 ± 5.4 nmol L−1 (n = 6). The NPB contribution to γ-P-ATP uptake was high (95 ± 3%, n = 4) at ambient concentrations but decreased to ∼50% at the highest ATP amendment. PRO had Km values 5–10 times greater than NPB. The above indicates that PRO and NPB were in close competition in terms of Pi acquisition

  17. Organic nutrient uptake by mycorrhizal fungi enhances ecosystem carbon storage: a model-based assessment.

    PubMed

    Orwin, Kate H; Kirschbaum, Miko U F; St John, Mark G; Dickie, Ian A

    2011-05-01

    Understanding the factors that drive soil carbon (C) accumulation is of fundamental importance given their potential to mitigate climate change. Much research has focused on the relationship between plant traits and C sequestration, but no studies to date have quantitatively considered traits of their mycorrhizal symbionts. Here, we use a modelling approach to assess the contribution of an important mycorrhizal fungal trait, organic nutrient uptake, to soil C accumulation. We show that organic nutrient uptake can significantly increase soil C storage, and that it has a greater effect under nutrient-limited conditions. The main mechanism behind this was an increase in plant C fixation and subsequent increased C inputs to soil through mycorrhizal fungi. Reduced decomposition due to increased nutrient limitation of saprotrophs also played a role. Our results indicate that direct uptake of nutrients from organic pools by mycorrhizal fungi could have a significant effect on ecosystem C cycling and storage. PMID:21395963

  18. Fine Particle Composition Measured During ICARTT: An Overview of Inorganic Ions and Water Soluble Organic Carbon

    NASA Astrophysics Data System (ADS)

    Peltier, R. E.; Sullivan, A.; Hennigan, C.; Weber, R. J.; Brock, C. A.; Wollny, A. G.; Holloway, J. S.; Degouw, J.; Warneke, C.

    2005-12-01

    The Particle-Into-Liquid Sampler (PILS) was deployed on NOAA's WP-3D aircraft during the summer of 2004 in support of the Intercontinental Transport and Chemical Transformation - New England Air Quality Study. Throughout the duration of the study, semi-continuous measurements of fine (PM1.0) inorganic ion components (sodium, ammonium, potassium, calcium, magnesium, chloride, nitrate, and sulfate) and water-soluble organic carbon (WSOC) were made on the NOAA WP-3D aircraft. Intensive sampling of the urbanized metropolitan areas of the Northeast (e.g. Boston-New York-Washington corridor), as well as biomass plume studies, were also conducted. Within this measurement domain, a range of aerosol sources were sampled, including fresh power plant plumes, relatively fresh and aged urban plumes, and aged biomass plumes. On average, sulfate was found to be a significant fraction of observed PM, comprising approximately 41% of volume, and highest concentrations tended to be at lowest altitudes. Net charge of observed ions was generally near-neutral, although a number of observations suggest more acidic conditions - generally found to be at lower altitudes and in spatial regions known for power generation. WSOC was found to be well correlated with CO, especially during instances of plumes that were dominated by biosmoke. During biomass events (high [WSOC]), analysis of charge balances on the inorganic aerosol show that an unmeasured anion is present. In this paper, we will present an overview of the measurements as well as compare and contrast WSOC and sulfate - two significant species observed during this campaign. This analysis will detail spatial resolution and identify sources of WSOC and sulfate present in the Northeastern United States.

  19. Effects of Land Use and Lithology on the Origin and Cycling of Dissolved Inorganic Carbon in the Brazos River, Texas

    NASA Astrophysics Data System (ADS)

    Zeng, F.; Masiello, C. A.

    2009-12-01

    Global rivers annually receive significant amounts of both inorganic and organic carbon from land. The fate of this terrestrial carbon depends largely on factors such as climate, lithology, land use and topography. In this study, we focused on dissolved inorganic carbon (DIC). We directly measured the partial pressure of CO2 (pCO2), and stable and radiocarbon isotopes of riverine DIC to understand how land use and lithology control the origin and cycling of DIC in the Brazos River. We observed a significant difference in the sources and fate of DIC between the middle and lower Brazos. In the middle Brazos, a combination of damming and waste water discharge from urban areas appears to have promoted algal growth, resulting in low pCO2 (646 ± 216 μatm) and young DIC (Δ14C = +85 ± 63‰) in the river water. In the lower Brazos, higher pCO2 (1174 ± 418 μatm) and much older riverine DIC (Δ14C = -151 ± 52‰) are due to a combination of the presence of easily erodible carbonate bedrock (marl) and oyster shells used as construction aggregates, and old organic matter lost from soils caused by agricultural activities. Overall, of the terrestrial inorganic carbon the Brazos received, a larger amount is delivered to the ocean while a smaller fraction is returned to the atmosphere through CO2 outgassing, which is different from the observation in the Amazon River.

  20. Electrochemical activation of carbon cloth in aqueous inorganic salt solution for superior capacitive performance

    NASA Astrophysics Data System (ADS)

    Ye, Dong; Yu, Yao; Tang, Jie; Liu, Lin; Wu, Yue

    2016-05-01

    Carbon cloth (CC) is an inexpensive and highly conductive textile with excellent mechanical flexibility and strength; it holds great promise as an electrode material for flexible supercapacitors. However, pristine CC has such a low surface area and poor electrochemical activity that the energy storage capability is usually very poor. Herein, we report a green method, two-step electrochemical activation in an aqueous solution of inorganic salts, to significantly enhance the capacitance of CC for supercapacitor application. Micro-cracks, exfoliated carbon fiber shells, and oxygen-containing functional groups (OFGs) were introduced onto the surface of the carbon filament. This resulted in an enhancement of over two orders of magnitude in capacitance compared to that of the bare CC electrode, reaching up to a maximum areal capacitance of 505.5 mF cm-2 at the current density of 6 mA cm-2 in aqueous H2SO4 electrolyte. Electrochemical reduction of CC electrodes led to the removal of most electrochemically unstable surface OFGs, resulting in superior charging/discharging rate capability and excellent cycling stability. Although the activated CC electrode contained a high-level of surface oxygen functional groups (~15 at%), it still exhibited a remarkable charging-discharging rate capability, retaining ~88% of the capacitance when the charging rate increased from 6 to 48 mA cm-2. Moreover, the activated CC electrode exhibited excellent cycling stability with ~97% capacitance remaining after 10 000 cycles at a current density of 24 mA cm-2. A symmetrical supercapacitor based on the activated CC exhibited an ideal capacitive behavior and fast charge-discharge properties. Such a simple, environment-friendly, and cost-effective strategy to activate CC shows great potential in the fabrication of high-performance flexible supercapacitors.Carbon cloth (CC) is an inexpensive and highly conductive textile with excellent mechanical flexibility and strength; it holds great promise as

  1. Global and regional ocean carbon uptake and climate change: sensitivity to a substantial mitigation scenario

    NASA Astrophysics Data System (ADS)

    Vichi, Marcello; Manzini, Elisa; Fogli, Pier Giuseppe; Alessandri, Andrea; Patara, Lavinia; Scoccimarro, Enrico; Masina, Simona; Navarra, Antonio

    2011-11-01

    Under future scenarios of business-as-usual emissions, the ocean storage of anthropogenic carbon is anticipated to decrease because of ocean chemistry constraints and positive feedbacks in the carbon-climate dynamics, whereas it is still unknown how the oceanic carbon cycle will respond to more substantial mitigation scenarios. To evaluate the natural system response to prescribed atmospheric "target" concentrations and assess the response of the ocean carbon pool to these values, 2 centennial projection simulations have been performed with an Earth System Model that includes a fully coupled carbon cycle, forced in one case with a mitigation scenario and the other with the SRES A1B scenario. End of century ocean uptake with the mitigation scenario is projected to return to the same magnitude of carbon fluxes as simulated in 1960 in the Pacific Ocean and to lower values in the Atlantic. With A1B, the major ocean basins are instead projected to decrease the capacity for carbon uptake globally as found with simpler carbon cycle models, while at the regional level the response is contrasting. The model indicates that the equatorial Pacific may increase the carbon uptake rates in both scenarios, owing to enhancement of the biological carbon pump evidenced by an increase in Net Community Production (NCP) following changes in the subsurface equatorial circulation and enhanced iron availability from extratropical regions. NCP is a proxy of the bulk organic carbon made available to the higher trophic levels and potentially exportable from the surface layers. The model results indicate that, besides the localized increase in the equatorial Pacific, the NCP of lower trophic levels in the northern Pacific and Atlantic oceans is projected to be halved with respect to the current climate under a substantial mitigation scenario at the end of the twenty-first century. It is thus suggested that changes due to cumulative carbon emissions up to present and the projected concentration

  2. [Preliminary research on the feature of dissolved inorganic carbon in Wulixia Reservoir in summer, Guangxi, China].

    PubMed

    Liu, Wen; Pu, Jun-Bing; Yu, Shi; Zhang, Cheng; Au, Yik-Yu; Yuan, Dao-Xian; Yang, Hui; Tang, Wei

    2014-08-01

    To gain more knowledge on the transformation process of dissolved inorganic carbon in a karst reservoir, in situ monitoring, sampling and lab experiments of water columns were carried out at various sampling sites along the flow line in Wulixia Reservoir, Guangxi, China during early July, 2013. Results showed that: (1) The hydrochemical characteristics of study areas were controlled by the carbonate equilibrium system and the hydrochemical type of all water samples was HCO3-Ca + Mg. (2) The DIC concentration decreased gradually (DIC(Average) : from 1.03 to 0.78 mmol x L(-1)) and the delta13C(DIC) increased gradually (delta13C(DIC(Average) : from -10.21per thousand to -6.62 per thousand) from the reservoir end area to dam area. Meanwhile, with the depth increase in water column, the DIC concentration increased gradually (DIC(Average) : from 0.86 to 1.05 mmol x L(-1)) and the delta13C(DIC) decreased gradually (delta13C(DIC(Average) : from -7.88 per thousand to -13.39 per thousand) from the surface to the bottom of the reservoir. Possible reasons for these research results were found as follows: (1) Dissolution-precipitation process of carbonate substance could be inhibited by other processes such as biogeochemical processes, which played little role in delta13C(DIC) variations. (2) Thermal stratification existed in the study areas which could influence the distribution of DIC and delta13C(DIC) by affecting the distribution of plankton and its orientation and strength of metabolism process, and the extent of organic matter decomposition, and so on. PMID:25338366

  3. Improved method for isotopic and quantitative analysis of dissolved inorganic carbon in natural water samples.

    PubMed

    Assayag, Nelly; Rivé, Karine; Ader, Magali; Jézéquel, Didier; Agrinier, Pierre

    2006-01-01

    We present here an improved and reliable method for measuring the concentration of dissolved inorganic carbon (DIC) and its isotope composition (delta(13)C(DIC)) in natural water samples. Our apparatus, a gas chromatograph coupled to an isotope ratio mass spectrometer (GCIRMS), runs in a quasi-automated mode and is able to analyze about 50 water samples per day. The whole procedure (sample preparation, CO(2(g))-CO(2(aq)) equilibration time and GCIRMS analysis) requires 2 days. It consists of injecting an aliquot of water into a H(3)PO(4)-loaded and He-flushed 12 mL glass tube. The H(3)PO(4) reacts with the water and converts the DIC into aqueous and gaseous CO(2). After a CO(2(g))-CO(2(aq)) equilibration time of between 15 and 24 h, a portion of the headspace gas (mainly CO(2)+He) is introduced into the GCIRMS, to measure the carbon isotope ratio of the released CO(2(g)), from which the delta(13)C(DIC) is determined via a calibration procedure. For standard solutions with DIC concentrations ranging from 1 to 25 mmol . L(-1) and solution volume of 1 mL (high DIC concentration samples) or 5 mL (low DIC concentration samples), delta(13)C(DIC) values are determined with a precision (1sigma) better than 0.1 per thousand. Compared with previously published headspace equilibration methods, the major improvement presented here is the development of a calibration procedure which takes the carbon isotope fractionation associated with the CO(2(g))-CO(2(aq)) partition into account: the set of standard solutions and samples has to be prepared and analyzed with the same 'gas/liquid' and 'H(3)PO(4)/water' volume ratios. A set of natural water samples (lake, river and hydrothermal springs) was analyzed to demonstrate the utility of this new method. PMID:16810706

  4. Encapsulated inorganic nanostructures: a route to sizable modulated, noncovalent, on-tube potentials in carbon nanotubes.

    PubMed

    Ilie, Adelina; Bendall, James S; Nagaoka, Katsumi; Egger, Stefan; Nakayama, Tomonobu; Crampin, Simon

    2011-04-26

    The large variety of hybrid carbon nanotube systems synthesized to date (e.g., by encapsulation, wrapping, or stacking) has provided a body of interactions with which to modify the host nanotubes to produce new functionalities and control their behavior. Each, however, has limitations: hybridization can strongly degrade desirable nanotube properties; noncovalent interactions with molecular systems are generally weak; and interlayer interactions in layered nanotubes are strongly dependent upon the precise stacking sequence. Here we show that the electrostatic/polarization interaction provides a generic route to designing unprecedented, sizable and highly modulated (1 eV range), noncovalent on-tube potentials via encapsulation of inorganic partially ionic phases where charge anisotropy is maximized. Focusing on silver iodide (AgI) nanowires inside single-walled carbon nanotubes, we exploit the polymorphism of AgI, which creates a variety of different charge distributions and, consequently, interactions of varying strength and symmetry. Combined ab initio calculations, high-resolution transmission electron microscopy, and scanning tunneling microscopy and spectroscopy are used to demonstrate symmetry breaking of the nanotube wave functions and novel electronic superstructure formation, which we then correlate with the modulated, noncovalent electrostatic/polarization potentials from the AgI filling. These on-tube potentials are markedly stronger than those due to other noncovalent interactions known in carbon nanotube systems and lead to significant redistribution of the wave function around the nanotube, with implications for conceptually new single-nanotube electronic devices and molecular assembly. Principles derived can translate more broadly to relating graphene systems, for designing/controlling potentials and superstructures.

  5. Organic matter turnover in reservoirs of the Harz Mountains (Germany): evidence from 13C/12C changes in dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Barth, Johannes A. C.; Nenning, Franziska; van Geldern, Robert; Mader, Michael; Friese, Kurt

    2014-05-01

    The Harz Mountains in Germany host several reservoirs for drinking water and electricity supply, the largest of which is the Rappbode System with its two pre-reservoirs. They are the Hassel and the Rappbode pre-reservoirs that have about the same size. These pre-reservoirs were investigated in a comparative study in order to quantify turnover of dissolved organic carbon (DOC) as a representative for organic matter. The objective was to find out how organic matter turnover in these reservoirs may affect dissolved inorganic carbon (DIC) and related CO2 dynamics. Depth profiles of dissolved organic and inorganic carbon (DOC and DIC) were established together with their carbon stable isotope distributions (expressed as δ13CDIC and δ13CDOC). Our results showed up to 104 % increase of DIC contents by organic matter turnover when calculated via isotope mass balances. This contrasted observations of DIC concentration differences between waters collected at the surface and at 12 m depth. These concentration comparisons showed much less DIC increases, and in some cases even decreases, between surface and bottom waters. Such discrepancies could be explained by formation of CO2 at depths below the photic zone that reached calculated values above 7000 ppmV. Such high CO2 concentrations may have reduced the DIC pool by upwards migration. Despite such a concentration decrease, turnover of organic matter has likely incorporated its isotope signal into the DIC pool. While not all DOC present was transposed to DIC, other forms of organic matter from sediments may also have transferred their isotope ratio on the DIC pool. However, with its stable isotope ratio of -28.5 permille the measured DOC was representative of C3 plants and can be assumed as a proxy for other forms of sedimentary carbon including carbon from pore waters and particulate organic matter. Other carbon turnover, including DOC leaching, increased import to the reservoirs after precipitation events and

  6. Nitrogen deposition: how important is it for global terrestrial carbon uptake?

    NASA Astrophysics Data System (ADS)

    Bala, G.; Devaraju, N.; Chaturvedi, R. K.; Caldeira, K.; Nemani, R.

    2013-07-01

    Global carbon budget studies indicate that the terrestrial ecosystems have remained a~large sink for carbon despite widespread deforestation activities. CO2-fertilization, N deposition and re-growth of mid-latitude forests are believed to be key drivers for land carbon uptake. In this study, we assess the importance of N deposition by performing idealized near-equilibrium simulations using the Community Land Model 4.0 (CLM4). In our equilibrium simulations, only 12-17% of the deposited Nitrogen is assimilated into the ecosystem and the corresponding carbon uptake can be inferred from a C : N ratio of 20:1. We calculate the sensitivity of the terrestrial biosphere for CO2-fertilization, climate warming and N deposition as changes in total ecosystem carbon for unit changes in global mean atmospheric CO2 concentration, global mean temperature and Tera grams of Nitrogen deposition per year, respectively. Based on these sensitivities, it is estimated that about 242 PgC could have been taken up by land due to the CO2 fertilization effect and an additional 175 PgC taken up as a result of the increased N deposition since the pre-industrial period. Because of climate warming, terrestrial ecosystem could have lost about 152 PgC during the same period. Therefore, since preindustrial times terrestrial carbon losses due to warming may have been approximately compensated by effects of increased N deposition, whereas the effect of CO2-fertilization is approximately indicative of the current increase in terrestrial carbon stock. Our simulations also suggest that the sensitivity of carbon storage to increased N deposition decreases beyond current levels, indicating climate warming effects on carbon storage may overwhelm N deposition effects in the future.

  7. Nitrogen deposition: how important is it for global terrestrial carbon uptake?

    NASA Astrophysics Data System (ADS)

    Bala, G.; Devaraju, N.; Chaturvedi, R. K.; Caldeira, K.; Nemani, R.

    2013-11-01

    Global carbon budget studies indicate that the terrestrial ecosystems have remained a large sink for carbon despite widespread deforestation activities. CO2 fertilization, N deposition and re-growth of mid-latitude forests are believed to be key drivers for land carbon uptake. In this study, we assess the importance of N deposition by performing idealized near-equilibrium simulations using the Community Land Model 4.0 (CLM4). In our equilibrium simulations, only 12-17% of the deposited nitrogen is assimilated into the ecosystem and the corresponding carbon uptake can be inferred from a C : N ratio of 20 : 1. We calculate the sensitivity of the terrestrial biosphere for CO2 fertilization, climate warming and N deposition as changes in total ecosystem carbon for unit changes in global mean atmospheric CO2 concentration, global mean temperature and Tera grams of nitrogen deposition per year, respectively. Based on these sensitivities, it is estimated that about 242 PgC could have been taken up by land due to the CO2 fertilization effect and an additional 175 PgC taken up as a result of the increased N deposition since the pre-industrial period. Because of climate warming, the terrestrial ecosystem could have lost about 152 PgC during the same period. Therefore, since pre-industrial times terrestrial carbon losses due to warming may have been more or less compensated by effects of increased N deposition, whereas the effect of CO2 fertilization is approximately indicative of the current increase in terrestrial carbon stock. Our simulations also suggest that the sensitivity of carbon storage to increased N deposition decreases beyond current levels, indicating that climate warming effects on carbon storage may overwhelm N deposition effects in the future.

  8. Li isotopes in foraminifera: a new proxy for past ocean dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Vigier, N.; Rollion-Bard, C.; Erez, J.

    2009-12-01

    Past ocean pH and pCO2 are critical parameters for establishing relationships between Earth climate and carbon cycle. For the Miocene-Pleistocene period, two main proxies have been used: carbon isotopes of di-unsaturated alkenones extracted from sea cores, and boron isotope signatures of marine carbonates [1, 2]. Both techniques lead to selfconsistent palaeooceanic pH or pCO2 estimates, but are associated with large uncertainties. Moreover, the paleovariations calculated from boron isotope measurements are a matter of debate. Additional proxies are therefore needed. Based on an in-situ analytical technique recently developed [3], we analysed a series of foraminifera - Amphistegina - cultured under various conditions (in pH, T and Dissolved Inorganic Carbon). We show that the lithium isotope signature of the foraminifera correlates with the DIC (r2 = 0.93). Conversely, there is no dependency of Li isotope signature on pH or T. A simple model of biomineralization in which growth rate is a key parameter can fit the whole dataset, including published values for other foraminifera species [4, 5]. This strongly suggests that the DIC-δ7Li correlation highlighted by the cultured Amphistegina can also be applied to other species. These results, combined with the published oceanic Li and B isotope paleovariations [2, 4, 5], allow us to estimate the ocean DIC and pCO2 evolution for the past 18Ma. The similarity with the pCO2 curve given by carbon isotopes measured in di-unsaturated alkenones is striking. This supports the use of Li isotopes as a new proxy and adds support to the existing data. It also suggests, in contrast with the common view, a less significant role of river input on the variation of the ocean Li isotope composition, at least for the period considered. [1] Pagani et al. (2005) Science 309, 600-603. [2] Pearson & Palmer (2000) Nature 406, 695-699. [3] Vigier et al. (2007) G-cubed 8, Q01003 [4] Hall et al. (2005) Mar. Geology 217, 255-265 [5] Hathorne

  9. Differential Assimilation of Inorganic Carbon and Leucine by Prochlorococcus in the Oligotrophic North Pacific Subtropical Gyre

    PubMed Central

    Björkman, Karin M.; Church, Matthew J.; Doggett, Joseph K.; Karl, David M.

    2015-01-01

    The light effect on photoheterotrophic processes in Prochlorococcus, and primary and bacterial productivity in the oligotrophic North Pacific Subtropical Gyre was investigated using 14C-bicarbonate and 3H-leucine. Light and dark incubation experiments were conducted in situ throughout the euphotic zone (0–175 m) on nine expeditions to Station ALOHA over a 3-year period. Photosynthetrons were also used to elucidate rate responses in leucine and inorganic carbon assimilation as a function of light intensity. Taxonomic group and cell-specific rates were assessed using flow cytometric sorting. The light:dark assimilation rate ratios of leucine in the top 150 m were ∼7:1 for Prochlorococcus, whereas the light:dark ratios for the non-pigmented bacteria (NPB) were not significant different from 1:1. Prochlorococcus assimilated leucine in the dark at per cell rates similar to the NPB, with a contribution to the total community bacterial production, integrated over the euphotic zone, of approximately 20% in the dark and 60% in the light. Depth-resolved primary productivity and leucine incorporation showed that the ratio of Prochlorococcus leucine:primary production peaked at 100 m then declined steeply below the deep chlorophyll maximum (DCM). The photosynthetron experiments revealed that, for Prochlorococcus at the DCM, the saturating irradiance (Ek) for leucine incorporation was reached at approximately half the light intensity required for light saturation of 14C-bicarbonate assimilation. Additionally, high and low red fluorescing Prochlorococcus populations (HRF and LRF), co-occurring at the DCM, had similar Ek values for their respective substrates, however, maximum assimilation rates, for both leucine and inorganic carbon, were two times greater for HRF cells. Our results show that Prochlorococcus contributes significantly to bacterial production estimates using 3H-leucine, whether or not the incubations are conducted in the dark or light, and this should be

  10. Differential Assimilation of Inorganic Carbon and Leucine by Prochlorococcus in the Oligotrophic North Pacific Subtropical Gyre.

    PubMed

    Björkman, Karin M; Church, Matthew J; Doggett, Joseph K; Karl, David M

    2015-01-01

    The light effect on photoheterotrophic processes in Prochlorococcus, and primary and bacterial productivity in the oligotrophic North Pacific Subtropical Gyre was investigated using (14)C-bicarbonate and (3)H-leucine. Light and dark incubation experiments were conducted in situ throughout the euphotic zone (0-175 m) on nine expeditions to Station ALOHA over a 3-year period. Photosynthetrons were also used to elucidate rate responses in leucine and inorganic carbon assimilation as a function of light intensity. Taxonomic group and cell-specific rates were assessed using flow cytometric sorting. The light:dark assimilation rate ratios of leucine in the top 150 m were ∼7:1 for Prochlorococcus, whereas the light:dark ratios for the non-pigmented bacteria (NPB) were not significant different from 1:1. Prochlorococcus assimilated leucine in the dark at per cell rates similar to the NPB, with a contribution to the total community bacterial production, integrated over the euphotic zone, of approximately 20% in the dark and 60% in the light. Depth-resolved primary productivity and leucine incorporation showed that the ratio of Prochlorococcus leucine:primary production peaked at 100 m then declined steeply below the deep chlorophyll maximum (DCM). The photosynthetron experiments revealed that, for Prochlorococcus at the DCM, the saturating irradiance (E k) for leucine incorporation was reached at approximately half the light intensity required for light saturation of (14)C-bicarbonate assimilation. Additionally, high and low red fluorescing Prochlorococcus populations (HRF and LRF), co-occurring at the DCM, had similar E k values for their respective substrates, however, maximum assimilation rates, for both leucine and inorganic carbon, were two times greater for HRF cells. Our results show that Prochlorococcus contributes significantly to bacterial production estimates using (3)H-leucine, whether or not the incubations are conducted in the dark or light, and this should

  11. Microstructure-Dependent Gas Adsorption: Accurate Predictions of Methane Uptake in Nanoporous Carbons

    SciTech Connect

    Ihm, Yungok; Cooper, Valentino R; Gallego, Nidia C; Contescu, Cristian I; Morris, James R

    2014-01-01

    We demonstrate a successful, efficient framework for predicting gas adsorption properties in real materials based on first-principles calculations, with a specific comparison of experiment and theory for methane adsorption in activated carbons. These carbon materials have different pore size distributions, leading to a variety of uptake characteristics. Utilizing these distributions, we accurately predict experimental uptakes and heats of adsorption without empirical potentials or lengthy simulations. We demonstrate that materials with smaller pores have higher heats of adsorption, leading to a higher gas density in these pores. This pore-size dependence must be accounted for, in order to predict and understand the adsorption behavior. The theoretical approach combines: (1) ab initio calculations with a van der Waals density functional to determine adsorbent-adsorbate interactions, and (2) a thermodynamic method that predicts equilibrium adsorption densities by directly incorporating the calculated potential energy surface in a slit pore model. The predicted uptake at P=20 bar and T=298 K is in excellent agreement for all five activated carbon materials used. This approach uses only the pore-size distribution as an input, with no fitting parameters or empirical adsorbent-adsorbate interactions, and thus can be easily applied to other adsorbent-adsorbate combinations.

  12. Influence of cloud optical thickness on surface diffuse light and carbon uptake in forests and croplands

    NASA Astrophysics Data System (ADS)

    Cheng, S. J.; Steiner, A. L.; Nadelhoffer, K. J.

    2014-12-01

    Accurately modeling atmospheric CO2 removal by terrestrial ecosystems requires an understanding of how atmospheric conditions change the rate of photosynthesis across major vegetation types. Diffuse light, which is created from interactions between incident solar radiation and atmospheric aerosols and clouds, has been postulated to increase carbon uptake in terrestrial ecosystems. To determine how cloud conditions affect carbon uptake through its influence on diffuse light, we quantify the relationship between cloud optical thickness, which indicates surface light attenuation by clouds, and surface diffuse light. We then examine the relationship between cloud optical thickness and gross primary productivity (GPP) to determine whether cloud properties could modulate GPP in temperate ecosystems. Surface diffuse light and GPP data are obtained from publically available Ameriflux data (Mead Crop sites, University of Michigan Biological Station, Morgan Monroe, and Howland Forest) and cloud optical thickness data over the Ameriflux sites are retrieved from NASA's Moderate Resolution Imaging Spetroradiometer. We compare the response of GPP to cloud optical thickness between croplands and forests, as well as within ecosystem types to determine ecosystem-specific responses and the role of plant community composition on ecosystem-level GPP under varying cloud conditions. By linking atmospheric cloud properties to surface light conditions and ecosystem carbon fluxes, we refine understanding of land-atmosphere carbon cycling and how changes in atmospheric cloud conditions may influence the future of the land carbon sink.

  13. Plant diversity effects on ecosystem evapotranspiration and carbon uptake: a controlled environment (Ecotron) and modeling approach

    NASA Astrophysics Data System (ADS)

    Milcu, Alexandru; Roy, Jacques

    2016-04-01

    Effects of species and functional diversity of plants on ecosystem evapotranspiration and carbon fluxes have been rarely assessed simultaneously. Here we present the results from an experiment that combined a lysimeter setup in a controlled environment facility (Ecotron) with large ecosystem samples/ monoliths originating from a long-term biodiversity experiment ("The Jena Experiment") and a modelling approach. We aimed at (1) quantifying the impact of plant species richness (4 vs. 16 species) on day- and night-time ecosystem water vapor fluxes and carbon uptake, (2) partitioning ecosystem evapotranspiration into evaporation and plant transpiration using the Shuttleworth and Wallace (SW) energy partitioning model, and (3) identifying the most parsimonious predictors of water vapor vapor and CO2 fluxes using plant functional trait-based metrics such as functional diversity and community weighted means. The SW model indicated that at low plant species richness, a higher proportion of the available energy was diverted to evaporation (a non-productive flux), while at higher species richness the proportion of ecosystem transpiration (a production-related water flux) increased. This led to an increased carbon gain per amount of water vapor loss (i.e. increased water use efficiency). While the LAI controlled the carbon and water fluxes, we also found that the diversity of plant functional traits, and in particular of leaf nitrogen concentration are potential important predictors of ecosystem transpiration and carbon uptake and consequently significantly contributed to increase in water use efficiency in communities with higher plant diversity.

  14. Modelling the 13C and 12C isotopes of inorganic and organic carbon in the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Gustafsson, Erik; Mörth, Carl-Magnus; Humborg, Christoph; Gustafsson, Bo G.

    2015-08-01

    In this study, 12C and 13C contents of all carbon containing state variables (dissolved inorganic and organic carbon, detrital carbon, and the carbon content of autotrophs and heterotrophs) have for the first time been explicitly included in a coupled physical-biogeochemical Baltic Sea model. Different processes in the carbon cycling have distinct fractionation values, resulting in specific isotopic fingerprints. Thus, in addition to simulating concentrations of different tracers, our new model formulation improves the possibility to constrain the rates of processes such as CO2 assimilation, mineralization, and air-sea exchange. We demonstrate that phytoplankton production and respiration, and the related air-sea CO2 fluxes, are to a large degree controlling the isotopic composition of organic and inorganic carbon in the system. The isotopic composition is further, but to a lesser extent, influenced by river loads and deep water inflows as well as transformation of terrestrial organic carbon within the system. Changes in the isotopic composition over the 20th century have been dominated by two processes - the preferential release of 12C to the atmosphere in association with fossil fuel burning, and the eutrophication of the Baltic Sea related to increased nutrient loads under the second half of the century.

  15. Carbon-Impurity Affected Depth Elemental Distribution in Solution-Processed Inorganic Thin Films for Solar Cell Application.

    PubMed

    Rehan, Shanza; Kim, Ka Young; Han, Jeonghyeob; Eo, Young-Joo; Gwak, Jihye; Ahn, Seung Kyu; Yun, Jae Ho; Yoon, KyungHoon; Cho, Ara; Ahn, SeJin

    2016-03-01

    A common feature of the inorganic thin films including Cu(In,Ga)(S,Se)2 fabricated by nonvacuum solution-based approaches is the doubled-layered structure, with a top dense inorganic film and a bottom carbon-containing residual layer. Although the latter has been considered to be the main efficiency limiting factor, (as a source of high series resistance), the exact influence of this layer is still not clear, and contradictory views are present. In this study, using a CISe as a model system, we report experimental evidence indicating that the carbon residual layer itself is electrically benign to the device performance. Conversely, carbon was found to play a significant role in determining the depth elemental distribution of final film, in which carbon selectively hinders the diffusion of Cu during selenization, resulting in significantly Cu-deficient top CISe layer while improving the film morphology. This carbon-affected compositional and morphological impact on the top CISe films is a determining factor for the device efficiency, which was supported by the finding that CISe solar cells processed from the precursor film containing intermediate amount of carbon demonstrated high efficiencies of up to 9.15% whereas the performances of the devices prepared from the precursor films with very high and very low carbon were notably poor. PMID:26817680

  16. Measurements of the dissolved inorganic carbon system and associated biogeochemical parameters in the Canadian Arctic, 1974-2009

    NASA Astrophysics Data System (ADS)

    Giesbrecht, K. E.; Miller, L. A.; Davelaar, M.; Zimmermann, S.; Carmack, E.; Johnson, W. K.; Macdonald, R. W.; McLaughlin, F.; Mucci, A.; Williams, W. J.; Wong, C. S.; Yamamoto-Kawai, M.

    2014-03-01

    We have assembled and conducted primary quality control on previously publicly unavailable water column measurements of the dissolved inorganic carbon system and associated biogeochemical parameters (oxygen, nutrients, etc.) made on 26 cruises in the subarctic and Arctic regions dating back to 1974. The measurements are primarily from the western side of the Canadian Arctic, but also include data that cover an area ranging from the North Pacific to the Gulf of St. Lawrence. The data were subjected to primary quality control (QC) to identify outliers and obvious errors. This data set incorporates over four thousand individual measurements of total inorganic carbon (TIC), alkalinity, and pH from the Canadian Arctic over a period of more than 30 years and provides an opportunity to increase our understanding of temporal changes in the inorganic carbon system in northern waters and the Arctic Ocean. The data set is available for download on the CDIAC (Carbon Dioxide Information Analysis Center) website: http://cdiac.ornl.gov/ftp/oceans/IOS_Arctic_Database/ (doi:10.3334/CDIAC/OTG.IOS_ARCT_CARBN).

  17. Ocean Heat and Carbon Uptake in Transient Climate Change: Identifying Model Uncertainty

    NASA Technical Reports Server (NTRS)

    Romanou, Anastasia; Marshall, John

    2015-01-01

    Global warming on decadal and centennial timescales is mediated and ameliorated by the oceansequestering heat and carbon into its interior. Transient climate change is a function of the efficiency by whichanthropogenic heat and carbon are transported away from the surface into the ocean interior (Hansen et al. 1985).Gregory and Mitchell (1997) and Raper et al. (2002) were the first to identify the importance of the ocean heat uptakeefficiency in transient climate change. Observational estimates (Schwartz 2012) and inferences from coupledatmosphere-ocean general circulation models (AOGCMs; Gregory and Forster 2008; Marotzke et al. 2015), suggest thatocean heat uptake efficiency on decadal timescales lies in the range 0.5-1.5 W/sq m/K and is thus comparable to theclimate feedback parameter (Murphy et al. 2009). Moreover, the ocean not only plays a key role in setting the timing ofwarming but also its regional patterns (Marshall et al. 2014), which is crucial to our understanding of regional climate,carbon and heat uptake, and sea-level change. This short communication is based on a presentation given by A.Romanou at a recent workshop, Oceans Carbon and Heat Uptake: Uncertainties and Metrics, co-hosted by US CLIVARand OCB. As briefly reviewed below, we have incomplete but growing knowledge of how ocean models used in climatechange projections sequester heat and carbon into the interior. To understand and thence reduce errors and biases inthe ocean component of coupled models, as well as elucidate the key mechanisms at work, in the final section we outlinea proposed model intercomparison project named FAFMIP. In FAFMIP, coupled integrations would be carried out withprescribed overrides of wind stress and freshwater and heat fluxes acting at the sea surface.

  18. Importance of controlling pH-depended dissolved inorganic carbon to prevent algal bloom outbreaks.

    PubMed

    Liu, Na; Yang, Yixuan; Li, Feng; Ge, Fei; Kuang, Yangduo

    2016-11-01

    This study investigated effects of pH-depended inorganic carbon (IC) species and pH on algal growth in the sewage simulation system, and fruitfully discussed the relationships among IC, pH and algal growth by the Monod kinetics. Results showed HCO3(-) significantly increased algal growth by 3.17-6.52 times than that of CO3(2-) and/or glucose when the value of pH was in the range of 8.0-9.5, and also the preferentially utilized indicated by the affinity coefficient (Kp) of HCO3(-), CO3(2-) and glucose (0.17, 15.14 and 31.22, respectively). Meanwhile, the same pH range facilitated HCO3(-) to become a dominated species (e.g., 48.80-93.19% of total IC). More importantly, good linear correlations pairwise existed among pH, IC species and algae growth. These results suggested pH plays a critical role in regulation of IC species and algae growth, which would be an efficient method to control the IC discharge from sewage effluents and weaken bloom outbreak. PMID:27584901

  19. Importance of controlling pH-depended dissolved inorganic carbon to prevent algal bloom outbreaks.

    PubMed

    Liu, Na; Yang, Yixuan; Li, Feng; Ge, Fei; Kuang, Yangduo

    2016-11-01

    This study investigated effects of pH-depended inorganic carbon (IC) species and pH on algal growth in the sewage simulation system, and fruitfully discussed the relationships among IC, pH and algal growth by the Monod kinetics. Results showed HCO3(-) significantly increased algal growth by 3.17-6.52 times than that of CO3(2-) and/or glucose when the value of pH was in the range of 8.0-9.5, and also the preferentially utilized indicated by the affinity coefficient (Kp) of HCO3(-), CO3(2-) and glucose (0.17, 15.14 and 31.22, respectively). Meanwhile, the same pH range facilitated HCO3(-) to become a dominated species (e.g., 48.80-93.19% of total IC). More importantly, good linear correlations pairwise existed among pH, IC species and algae growth. These results suggested pH plays a critical role in regulation of IC species and algae growth, which would be an efficient method to control the IC discharge from sewage effluents and weaken bloom outbreak.

  20. Assessment of bacterial community structure in nitrifying biofilm under inorganic carbon-sufficient and -limited conditions.

    PubMed

    Bae, Hyokwan; Chung, Yun-Chul; Yang, Heejeong; Lee, Changsoo; Aryapratama, Rio; Yoo, Young J; Lee, Seockheon

    2015-01-01

    In this work, nitrification and changes in the composition of the total bacterial community under inorganic carbon (IC)-limited conditions, in a nitrifying moving bed biofilm reactor, was investigated. A culture-independent analysis of cloning and sequencing based on the 16S rRNA gene was applied to quantify the bacterial diversity and to determine bacterial taxonomic assignment. IC concentrations had significant effects on the stability of ammonia-oxidation as indicated by the reduction of the nitrogen conversion rate with high NH4(+)-N loadings. The predominance of Nitrosomonas europaea was maintained in spite of changes in the IC concentration. In contrast, heterotrophic bacterial species contributed to a high bacterial diversity, and to a dynamic shift in the bacterial community structure, under IC-limited conditions. In this study, individual functions of heterotrophic bacteria were estimated based on taxonomic information. Possible key roles of coexisting heterotrophic bacteria are the assimilation of organic compounds of extracellular polymeric substances produced by nitrifiers, and biofilm formation by providing a filamentous structure and aggregation properties. PMID:25560266

  1. Assessment of bacterial community structure in nitrifying biofilm under inorganic carbon-sufficient and -limited conditions.

    PubMed

    Bae, Hyokwan; Chung, Yun-Chul; Yang, Heejeong; Lee, Changsoo; Aryapratama, Rio; Yoo, Young J; Lee, Seockheon

    2015-01-01

    In this work, nitrification and changes in the composition of the total bacterial community under inorganic carbon (IC)-limited conditions, in a nitrifying moving bed biofilm reactor, was investigated. A culture-independent analysis of cloning and sequencing based on the 16S rRNA gene was applied to quantify the bacterial diversity and to determine bacterial taxonomic assignment. IC concentrations had significant effects on the stability of ammonia-oxidation as indicated by the reduction of the nitrogen conversion rate with high NH4(+)-N loadings. The predominance of Nitrosomonas europaea was maintained in spite of changes in the IC concentration. In contrast, heterotrophic bacterial species contributed to a high bacterial diversity, and to a dynamic shift in the bacterial community structure, under IC-limited conditions. In this study, individual functions of heterotrophic bacteria were estimated based on taxonomic information. Possible key roles of coexisting heterotrophic bacteria are the assimilation of organic compounds of extracellular polymeric substances produced by nitrifiers, and biofilm formation by providing a filamentous structure and aggregation properties.

  2. Transcriptional Response of the Sulfur Chemolithoautotroph Thiomicrospira crunogena to Dissolved Inorganic Carbon Limitation

    PubMed Central

    Dobrinski, Kimberly P.; Enkemann, Steven A.; Yoder, Sean J.; Haller, Edward

    2012-01-01

    The hydrothermal vent gammaproteobacterium Thiomicrospira crunogena inhabits an unstable environment and must endure dramatic changes in habitat chemistry. This sulfur chemolithoautotroph responds to changes in dissolved inorganic carbon (DIC) (DIC = CO2 + HCO3− + CO3−2) availability with a carbon-concentrating mechanism (CCM) in which whole-cell affinity for DIC, as well as the intracellular DIC concentration, increases substantially under DIC limitation. To determine whether this CCM is regulated at the level of transcription, we resuspended cells that were cultivated under high-DIC conditions in chemostats in growth medium with low concentrations of DIC and tracked CCM development in the presence and absence of the RNA polymerase inhibitor rifampin. Induction of the CCM, as measured by silicone oil centrifugation, was hindered in the presence of rifampin. Similar results were observed for carboxysome gene transcription and assembly, as assayed by quantitative reverse transcription-PCR (qRT-PCR) and transmission electron microscopy, respectively. Genome-wide transcription patterns for cells grown under DIC limitation and those grown under ammonia limitation were assayed via microarrays and compared. In addition to carboxysome genes, two novel genes (Tcr_1019 and Tcr_1315) present in other organisms, including chemolithoautotrophs, but whose function(s) has not been elucidated in any organism were found to be upregulated under low-DIC conditions. Likewise, under ammonia limitation, in addition to the expected enhancement of ammonia transporter and PII gene transcription, the transcription of two novel genes (Tcr_0466 and Tcr_2018) was measurably enhanced. Upregulation of all four genes (Tcr_1019, 4-fold; Tcr_131, ∼7-fold; Tcr_0466, >200-fold; Tcr_2018, 7-fold), which suggests that novel components are part of the response to nutrient limitation by this organism, was verified via qRT-PCR. PMID:22328671

  3. Water column profiles of particulate inorganic carbon in the northeast subarctic Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Sutton, J. N.; Bishop, J. K.; Martinez, E. J.; Weiss, G. A.; Weiss, A.; Derr, A.; Strubhar, W.; Robert, M.; Wood, T.

    2013-12-01

    High resolution and real-time measurement of particulate inorganic carbon (PIC) content in seawater is necessary to improve our spatial and temporal understanding of marine carbon flux and the possible effects of ocean acidification on the biological pump. On four occasions since August 2012, we have mapped PIC distribution from surface to bottom at 26 stations along the IOS-Canada Line P transect from western Vancouver Island, BC, Canada to Ocean Station PAPA, 50N 145W using a prototype (PIC001) and a near-commercial quality (PIC008) optical birefringence sensor. The sensors are highly modified 6000m-rated WETLabs C-star transmissometers, which use a polarized laser beam and a cross-polarized receiver to measure photons emitted after passing through birefringent solids. At major stations along Line P (P2, P4, P8, P12, P16, P20, P26), one-liter rosette-collected calibration water samples were filtered through 0.45 μm Supor filters using a small-volume direct filtration system. These samples were analysed for acid-leachable particulate elements (with emphasis on Ca, Na, and Mg) by inductively coupled plasma mass spectrometry (ICPMS). ICPMS PIC was calculated as residual Ca after correction for seawater Ca using Na data. Here we report results for late summer (Aug. 2012) and winter (Feb. 2013). As expected, high levels of PIC (> 100 nmol L-1 to > 2000 nmol L-1) were found in surface waters but rapidly declined at depths greater than 200m and increased again in the nepheloid layer (>50 nmol L-1). Striking seasonal differences in PIC content and PIC profile shape were observed particularly at near shore stations P2, P4, P8 and P12. The results from this research, including sensor evolution and calibration performance, will be presented.

  4. Photosynthesis in estuarine intertidal microphytobenthos is limited by inorganic carbon availability.

    PubMed

    Vieira, Sónia; Cartaxana, Paulo; Máguas, Cristina; Marques da Silva, Jorge

    2016-04-01

    The effects of dissolved inorganic carbon (DIC) availability on photosynthesis were studied in two estuarine intertidal microphytobenthos (MPB) communities and in the model diatom species Phaeodactylum tricornutum. Kinetics of DIC acquisition, measured with a liquid-phase oxygen electrode, showed higher K(1/2)(DIC) (0.31 mM) and Vm (7.78 nmol min(-1) µg (Chl a)(-1)) for MPB suspensions than for P. tricornutum (K(1/2)(DIC) = 0.23 mM; Vm = 4.64 nmol min(-1) µg (Chl a)(-1)), suggesting the predominance of species with lower affinity for DIC and higher photosynthetic capacity in the MPB. The net photosynthetic rate of the MPB suspensions reached saturation at a DIC concentration of 1-1.5 mM. This range was lower than the concentrations found in the interstitial water of the top 5-mm sediment layer, suggesting no limitation of photosynthesis by DIC in the MPB communities. Accordingly, carbon isotope discrimination revealed a moderate activity of CO2-concentrating mechanisms in the MPB. However, addition of NaHCO3 to intact MPB biofilms caused a significant increase in the relative maximum photosynthetic electron transport rate (rETR max) measured by imaging pulse-amplitude modulated chlorophyll a fluorescence. These results suggest local depletion of DIC at the photic layer of the sediment (the first few hundred µm), where MPB cells accumulate during diurnal low tides. This work provides the first direct experimental evidence of DIC limitation of photosynthesis in highly productive intertidal MPB communities. PMID:26546444

  5. Simulated In Situ Determination of Soil Profile Organic and Inorganic Carbon With LIBS and VisNIR

    NASA Astrophysics Data System (ADS)

    Bricklemyer, R. S.; Brown, D. J.; Clegg, S. M.; Barefield, J. E.

    2008-12-01

    There is growing need for rapid, accurate, and inexpensive methods to measure, and verify soil organic carbon (SOC) change for national greenhouse gas accounting and the development of a soil carbon trading market. Laser Induced Breakdown Spectroscopy (LIBS) and Visible and Near Infrared Spectroscopy (VisNIR) are complementary analytical techniques that have the potential to fill that need. The LIBS method provides precise elemental analysis of soils, but generally cannot distinguish between organic C and inorganic C. VisNIR has been established as a viable technique for measuring soil properties including SOC and inorganic carbon (IC). As part of the Big Sky Carbon Sequestration Regional Partnership, 240 intact core samples (3.8 x 50 cm) have been collected from six agricultural fields in north central Montana, USA. Each of these core samples were probed concurrently with LIBS and VisNIR at 2.5, 7.5, 12.5, 17.5, 22.5, 27.5, 35 and 45 cm (+/- 1.5 cm) depths. VisNIR measurements were taken using an Analytical Spectral Devices (ASD, Boulder, CO, USA) Agrispec spectrometer to determine the partition of SOC vs. IC in the samples. The LIBS scans were collected with the LANL LIBS Core Scanner Instrument which collected the entire 200 - 900 nm plasma emission including the 247.8 nm carbon emission line. This instrument also collected the emission from the elements typically found in inorganic carbon (Ca and Mg) and organic carbon (H, O, and N). Subsamples of soil (~ 4 g) were taken from interrogation points for laboratory determination of SOC and IC. Using this analytical data, we constructed several full spectrum multivariate VisNIR/LIBS calibration models for SOC and IC. These models were then applied to independent validation cores for model evaluation.

  6. Decoupling of Organic and Inorganic Carbon Isotope Records during the Coniacian-Santonian in the Western Interior Seaway: Implications for Carbon Cycling during OAE 3

    NASA Astrophysics Data System (ADS)

    Tessin, A. C.; Sheldon, N. D.; Hendy, I. L.

    2014-12-01

    The sedimentary record of the Cretaceous Western Interior Seaway is characterized by periods of enhanced organic carbon burial known as Oceanic Anoxic Events (OAEs). Compared to older OAEs, the last Cretaceous OAE, the Coniacian-Santonian OAE 3 (~86 Ma), is more enigmatic and its driving mechanisms less well understood. In contrast to the nearly global OAE 2, OAE 3 was geographically limited to restricted basins and shallow seaways. Due to significant organic carbon burial, OAEs are traditionally identified by large, rapid positive carbon isotope excursions, whereas OAE 3 is characterized by a relatively muted carbonate positive carbon "plateau" that persists for ~3 myrs, which suggests significantly different carbon burial processes or paleoceanographic conditions. Here we present new high-resolution paired organic-inorganic carbon isotope records from the Niobrara Formation recovered in the USGS #1 Portland core from Cañon City Basin, Colorado. At the onset of OAE 3, there is a distinct decoupling of the organic and inorganic carbon isotope records. δ13Ccarb exhibits an abrupt ~1‰ positive isotope excursion at the onset of carbon burial superimposed on a larger ~2‰ isotope trend. Coeval with this shift, is a ~3‰ negative δ13Corg excursion. These results indicate that during OAE 3 in the Western Interior Seaway, while significant organic carbon was being buried, organic carbon was depleted in 13C. The carbon isotope records will be compared to records of organic carbon, C:N ratios, and redox sensitive metals such as U and Mo to evaluate how carbon cycling changed during OAE 3.

  7. Prolonged inorganic arsenite exposure suppresses insulin-stimulated AKT S473 phosphorylation and glucose uptake in 3T3-L1 adipocytes: Involvement of the adaptive antioxidant response

    SciTech Connect

    Xue, Peng; Hou, Yongyong; Zhang, Qiang; Woods, Courtney G.; Yarborough, Kathy; Liu, Huiyu; Sun, Guifan; Andersen, Melvin E.; Pi, Jingbo

    2011-04-08

    Highlights: {yields} In 3T3-L1 adipocytes iAs{sup 3+} decreases insulin-stimulated glucose uptake. {yields} iAs{sup 3+} attenuates insulin-induced phosphorylation of AKT S473. {yields} iAs{sup 3+} activates the cellular adaptive oxidative stress response. {yields} iAs{sup 3+} impairs insulin-stimulated ROS signaling. {yields} iAs{sup 3+} decreases expression of adipogenic genes and GLUT4. -- Abstract: There is growing evidence that chronic exposure of humans to inorganic arsenic, a potent environmental oxidative stressor, is associated with the incidence of type 2 diabetes (T2D). One critical feature of T2D is insulin resistance in peripheral tissues, especially in mature adipocytes, the hallmark of which is decreased insulin-stimulated glucose uptake (ISGU). Despite the deleterious effects of reactive oxygen species (ROS), they have been recognized as a second messenger serving an intracellular signaling role for insulin action. Nuclear factor erythroid 2-related factor 2 (NRF2) is a central transcription factor regulating cellular adaptive response to oxidative stress. This study proposes that in response to arsenic exposure, the NRF2-mediated adaptive induction of endogenous antioxidant enzymes blunts insulin-stimulated ROS signaling and thus impairs ISGU. Exposure of differentiated 3T3-L1 cells to low-level (up to 2 {mu}M) inorganic arsenite (iAs{sup 3+}) led to decreased ISGU in a dose- and time-dependent manner. Concomitant to the impairment of ISGU, iAs{sup 3+} exposure significantly attenuated insulin-stimulated intracellular ROS accumulation and AKT S473 phosphorylation, which could be attributed to the activation of NRF2 and induction of a battery of endogenous antioxidant enzymes. In addition, prolonged iAs{sup 3+} exposure of 3T3-L1 adipocytes resulted in significant induction of inflammatory response genes and decreased expression of adipogenic genes and glucose transporter type 4 (GLUT4), suggesting chronic inflammation and reduction in GLUT4

  8. [Study on the content and carbon isotopic composition of water dissolved inorganic carbon from rivers around Xi'an City].

    PubMed

    Guo, Wei; Li, Xiang-Zhong; Liu, Wei-Guo

    2013-04-01

    In this study, the content and isotopic compositions of water dissolved inorganic carbon (DIC) from four typical rivers (Chanhe, Bahe, Laohe and Heihe) around Xi'an City were studied to trace the possible sources of DIC. The results of this study showed that the content of DIC in the four rivers varied from 0.34 to 5.66 mmol x L(-1) with an average value of 1.23 mmol x L(-1). In general, the content of DIC increased from the headstream to the river mouth. The delta13C(DIC) of four rivers ranged from -13.3 per thousand to -7.2 per thousand, with an average value of -10.1 per thousand. The delta13C(DIC) values of river water were all negative (average value of -12.6 per thousand) at the headstream of four rivers, but the delta13C(DIC) values of downstream water were more positive (with an average value of -9.4 per thousand). In addition, delta13C(DIC) of river water showed relatively negative values (the average value of delta13C(DIC) was -10.5 per thousand) near the estuary of the rivers. The variation of the DIC content and its carbon isotope suggested that the DIC sources of the rivers varied from the headstream to the river mouth. The negative delta13C(DIC) value indicated that the DIC may originate from the soil CO2 at the headstream of the rivers. On the other hand, the delta13C(DIC) values of river water at the middle and lower reaches of rivers were more positive, and it showed that soil CO2 produced by respiration of the C4 plants (like corn) and soil carbonates with positive delta13C values may be imported into river water. Meanwhile, the input of pollutants with low delta13C(DIC) values may result in a decrease of delta13C(DIC) values in the rivers. The study indicated that the DIC content and carbon isotope may be used to trace the sources of DIC in rivers around Xi'an City. Our study may provide some basic information for tracing the sources of DIC of rivers in the small watershed area in the Loess Plateau of China.

  9. Sensitivity Analysis Tailored to Constrain 21st Century Terrestrial Carbon-Uptake

    NASA Astrophysics Data System (ADS)

    Muller, S. J.; Gerber, S.

    2013-12-01

    The long-term fate of terrestrial carbon (C) in response to climate change remains a dominant source of uncertainty in Earth-system model projections. Increasing atmospheric CO2 could be mitigated by long-term net uptake of C, through processes such as increased plant productivity due to "CO2-fertilization". Conversely, atmospheric conditions could be exacerbated by long-term net release of C, through processes such as increased decomposition due to higher temperatures. This balance is an important area of study, and a major source of uncertainty in long-term (>year 2050) projections of planetary response to climate change. We present results from an innovative application of sensitivity analysis to LM3V, a dynamic global vegetation model (DGVM), intended to identify observed/observable variables that are useful for constraining long-term projections of C-uptake. We analyzed the sensitivity of cumulative C-uptake by 2100, as modeled by LM3V in response to IPCC AR4 scenario climate data (1860-2100), to perturbations in over 50 model parameters. We concurrently analyzed the sensitivity of over 100 observable model variables, during the extant record period (1970-2010), to the same parameter changes. By correlating the sensitivities of observable variables with the sensitivity of long-term C-uptake we identified model calibration variables that would also constrain long-term C-uptake projections. LM3V employs a coupled carbon-nitrogen cycle to account for N-limitation, and we find that N-related variables have an important role to play in constraining long-term C-uptake. This work has implications for prioritizing field campaigns to collect global data that can help reduce uncertainties in the long-term land-atmosphere C-balance. Though results of this study are specific to LM3V, the processes that characterize this model are not completely divorced from other DGVMs (or reality), and our approach provides valuable insights into how data can be leveraged to be better

  10. Prediction of the Rate of Uptake of Carbon Monoxide From Blood by Extravascular Tissues

    PubMed Central

    Bruce, Eugene N.; Bruce, Margaret C.; Erupaka, Kinnera

    2008-01-01

    Uptake of environmental carbon monoxide (CO) via the lungs raises the CO content of blood and of myoglobin (Mb)-containing tissues, but the blood-to-tissue diffusion coefficient for CO (DmCO) and tissue CO content are not easily measurable in humans. We used a multicompartment mathematical model to predict the effects of different values of DmCO on the time courses and magnitudes of CO content of blood and Mb-containing tissues when various published experimental studies were simulated. The model enhances our earlier model by adding mass balance equations for oxygen and by dividing the muscle compartment into 2 subcompartments. We found that several published experimental findings are compatible with either fast or slow rates of blood-tissue transfer of CO, whereas others are only compatible with slow rates of tissue uptake of CO. We conclude that slow uptake is most consistent with all of the experimental data. Slow uptake of CO by tissue is primarily due to the very small blood-to-tissue partial pressure gradients for CO. PMID:18313993

  11. Sampling and analytical methods of stable isotopes and dissolved inorganic carbon from CO2 injection sites

    NASA Astrophysics Data System (ADS)

    van Geldern, Robert; Myrttinen, Anssi; Becker, Veith; Barth, Johannes A. C.

    2010-05-01

    The isotopic composition (δ13C) of dissolved inorganic carbon (DIC), in combination with DIC concentration measurements, can be used to quantify geochemical trapping of CO2 in water. This is of great importance in monitoring the fate of CO2 in the subsurface in CO2 injection projects. When CO2 mixes with water, a shift in the δ13C values, as well as an increase in DIC concentrations is observed in the CO2-H2O system. However, when using standard on-site titration methods, it is often challenging to determining accurate in-situ DIC concentrations. This may be due to CO2 degassing and CO2-exchange between the sample and the atmosphere during titration, causing a change in the pH value or due to other unfavourable conditions such as turbid water samples or limited availability of fluid samples. A way to resolve this problem is by simultaneously determining the DIC concentration and carbon isotopic composition using a standard continuous flow Isotope Ratio Mass Spectrometry (CF-IRMS) setup with a Gasbench II coupled to Delta plusXP mass spectrometer. During sampling, in order to avoid atmospheric contact, water samples taken from the borehole-fluid-sampler should be directly transferred into a suitable container, such as a gasbag. Also, to avoid isotope fractionation due to biological activity in the sample, it is recommended to stabilize the gasbags prior to sampling with HgCl2 for the subsequent stable isotope analysis. The DIC concentration of the samples can be determined from the area of the sample peaks in a chromatogram from a CF-IRMS analysis, since it is directly proportional to the CO2 generated by the reaction of the water with H3PO4. A set of standards with known DIC concentrations should be prepared by mixing NaHCO3 with DIC free water. Since the DIC concentrations of samples taken from CO2 injection sites are expected to be exceptionally high due to the additional high amounts of added CO2, the DIC concentration range of the standards should be set high

  12. [Correlation Among Soil Organic Carbon, Soil Inorganic Carbon and the Environmental Factors in a Typical Oasis in the Southern Edge of the Tarim Basin].

    PubMed

    Gong, Lu; Zhu, Mei-ling; Liu, Zeng-yuan; Zhang, Xue-ni; Xie, Li-na

    2016-04-15

    We analyzed the differentiation among the environmental factors and soil organic/inorganic carbon contents of irrigated desert soil, brown desert soil, saline soil and aeolian sandy soil by classical statistics methods, and studied the correlation between soil carbon contents and the environmental factor by redundancy analysis (RDA) in a typical oasis of Yutian in the southern edge of the Tarim Basin. The results showed that the average contents of soil organic carbon and soil inorganic carbon were 2.51 g · kg⁻¹ and 25.63 g · kg⁻¹ respectively. The soil organic carbon content of the irrigated desert soil was significantly higher than those of brown desert soil, saline soil and aeolian sandy soil, while the inorganic carbon content of aeolian sandy soil was significantly higher than those of other soil types. The soil moisture and nutrient content were the highest in the irrigated desert soil and the lowest in the aeolian sandy sail. All soil types had high degree of salinization except the irrigated desert soil. The RDA results showed that the impacts of environmental factors on soil carbon contents ranked in order of importance were total nitrogen > available phosphorus > soil moisture > ground water depth > available potassium > pH > total salt. The soil carbon contents correlated extremely significantly with total nitrogen, available phosphorus, soil moisture and ground water depth (P < 0.01), and it correlated significantly with available potassium and pH (P < 0.05). There was no significant correlation between soil carbon contents and other environmental factors (P > 0.05). PMID:27548977

  13. [Correlation Among Soil Organic Carbon, Soil Inorganic Carbon and the Environmental Factors in a Typical Oasis in the Southern Edge of the Tarim Basin].

    PubMed

    Gong, Lu; Zhu, Mei-ling; Liu, Zeng-yuan; Zhang, Xue-ni; Xie, Li-na

    2016-04-15

    We analyzed the differentiation among the environmental factors and soil organic/inorganic carbon contents of irrigated desert soil, brown desert soil, saline soil and aeolian sandy soil by classical statistics methods, and studied the correlation between soil carbon contents and the environmental factor by redundancy analysis (RDA) in a typical oasis of Yutian in the southern edge of the Tarim Basin. The results showed that the average contents of soil organic carbon and soil inorganic carbon were 2.51 g · kg⁻¹ and 25.63 g · kg⁻¹ respectively. The soil organic carbon content of the irrigated desert soil was significantly higher than those of brown desert soil, saline soil and aeolian sandy soil, while the inorganic carbon content of aeolian sandy soil was significantly higher than those of other soil types. The soil moisture and nutrient content were the highest in the irrigated desert soil and the lowest in the aeolian sandy sail. All soil types had high degree of salinization except the irrigated desert soil. The RDA results showed that the impacts of environmental factors on soil carbon contents ranked in order of importance were total nitrogen > available phosphorus > soil moisture > ground water depth > available potassium > pH > total salt. The soil carbon contents correlated extremely significantly with total nitrogen, available phosphorus, soil moisture and ground water depth (P < 0.01), and it correlated significantly with available potassium and pH (P < 0.05). There was no significant correlation between soil carbon contents and other environmental factors (P > 0.05).

  14. New multifunctional porous materials based on inorganic-organic hybrid single-walled carbon nanotubes: gas storage and high-sensitive detection of pesticides.

    PubMed

    Wang, Feng; Zhao, Jinbo; Gong, Jingming; Wen, Lili; Zhou, Li; Li, Dongfeng

    2012-09-10

    Single-walled carbon nanotubes (SWNTs) that are covalently functionalized with benzoic acid (SWNT-PhCOOH) can be integrated with transition-metal ions to form 3D porous inorganic-organic hybrid frameworks (SWNT-Zn). In particular, N(2)-adsorption analysis shows that the BET surface area increases notably from 645.3 to 1209.9 m(2)  g(-1) for SWNTs and SWNT-Zn, respectively. This remarkable enhancement in the surface area of SWNT-Zn is presumably due to the microporous motifs from benzoates coordinated to intercalated zinc ions between the functionalized SWNTs; this assignment was also corroborated by NLDFT pore-size distributions. In addition, the excess-H(2)-uptake maximum of SWNT-Zn reaches about 3.1 wt. % (12 bar, 77 K), which is almost three times that of the original SWNTs (1.2 wt. % at 12 bar, 77 K). Owing to its inherent conductivity and pore structure, as well as good dispersibility, SWNT-Zn is an effective candidate as a sensitive electrochemical stripping voltammetric sensor for organophosphate pesticides (OPs): By using solid-phase extraction (SPE) with SWNT-Zn-modified glassy carbon electrode, the detection limit of methyl parathion (MP) is 2.3 ng mL(-1).

  15. Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis.

    PubMed

    Fellbaum, Carl R; Gachomo, Emma W; Beesetty, Yugandhar; Choudhari, Sulbha; Strahan, Gary D; Pfeffer, Philip E; Kiers, E Toby; Bücking, Heike

    2012-02-14

    The arbuscular mycorrhizal (AM) symbiosis, formed between the majority of land plants and ubiquitous soil fungi of the phylum Glomeromycota, is responsible for massive nutrient transfer and global carbon sequestration. AM fungi take up nutrients from the soil and exchange them against photosynthetically fixed carbon (C) from the host. Recent studies have demonstrated that reciprocal reward strategies by plant and fungal partners guarantee a "fair trade" of phosphorus against C between partners [Kiers ET, et al. (2011) Science 333:880-882], but whether a similar reward mechanism also controls nitrogen (N) flux in the AM symbiosis is not known. Using mycorrhizal root organ cultures, we manipulated the C supply to the host and fungus and followed the uptake and transport of N sources in the AM symbiosis, the enzymatic activities of arginase and urease, and fungal gene expression in the extraradical and intraradical mycelium. We found that the C supply of the host plant triggers the uptake and transport of N in the symbiosis, and that the increase in N transport is orchestrated by changes in fungal gene expression. N transport in the symbiosis is stimulated only when the C is delivered by the host across the mycorrhizal interface, not when C is supplied directly to the fungal extraradical mycelium in the form of acetate. These findings support the importance of C flux from the root to the fungus as a key trigger for N uptake and transport and provide insight into the N transport regulation in the AM symbiosis.

  16. Sea spray geoengineering can reduce ocean net primary productivity and carbon uptake

    NASA Astrophysics Data System (ADS)

    Partanen, Antti-Ilari; Keller, David; Korhonen, Hannele; Matthews, Damon

    2016-04-01

    contrast to previous studies on geoengineering and carbon cycle, geoengineering decreased the ocean carbon uptake during the whole 21st century. Even though carbon export into deep ocean was increased due to geoengineering, the upper ocean was gaining carbon at a lower rate than in CTRL. The exact reasons why cooling climate (compared to CTRL) did not increase ocean carbon uptake also in the upper ocean in any part of the simulation require more investigation. Our results imply that dynamics between radiation, carbon cycle, and ocean need to be considered to understand the effects of sea spray geoengineering on the marine ecosystems and carbon uptake. Considering only the reduced sunlight for marine ecosystems would lead to a strong underestimation of the impacts.

  17. Organic, elemental and inorganic carbon in particulate matter of six urban environments in Europe

    NASA Astrophysics Data System (ADS)

    Sillanpää, M.; Frey, A.; Hillamo, R.; Pennanen, A. S.; Salonen, R. O.

    2005-11-01

    A series of 7-week sampling campaigns were conducted in urban background sites of six European cities as follows: Duisburg (autumn), Prague (winter), Amsterdam (winter), Helsinki (spring), Barcelona (spring) and Athens (summer). The campaigns were scheduled to include seasons of local public health concern due to high particulate concentrations or findings in previously conducted epidemiological studies. Aerosol samples were collected in parallel with two identical virtual impactors that divide air particles into fine (PM2.5) and coarse (PM2.5-10) size ranges. From the collected filter samples, elemental (EC) and organic (OC) carbon contents were analysed with a thermal-optical carbon analyser (TOA); total Ca, Ti, Fe, Si, Al and K by energy dispersive X-ray fluorescence (ED-XRF); As, Cu, Ni, V, and Zn by inductively coupled plasma mass spectrometry (ICP/MS); Ca2+, succinate, malonate and oxalate by ion chromatography (IC); and the sum of levoglucosan+galactosan+mannosan (∑MA) by liquid chromatography mass spectrometry (LC/MS). The campaign means of PM2.5 and PM2.5-10 were 8.3-29.6 µg m-3 and 5.4-28.7 µg m-3, respectively. The contribution of particulate organic matter (POM) to PM2.5 ranged from 21% in Barcelona to 54% in Prague, while that to PM2.5-10 ranged from 10% in Barcelona to 27% in Prague. The contribution of EC was higher to PM2.5 (5-9%) than to PM2.5-10 (1-6%) in all the six campaigns. Carbonate (C(CO3), that interferes with the TOA analysis, was detected in PM2.5-10 of Athens and Barcelona but not elsewhere. It was subtracted from the OC by a simple integration method that was validated. The CaCO3 accounted for 55% and 11% of PM2.5-10 in Athens and Barcelona, respectively. It was anticipated that combustion emissions from vehicle engines affected the POM content in PM2.5 of all the six sampling campaigns, but a comparison of mass concentration ratios of the selected inorganic and organic tracers of common sources of organic material to POM suggested

  18. Measurements of the dissolved inorganic carbon system and associated biogeochemical parameters in the Canadian Arctic, 1974-2009

    NASA Astrophysics Data System (ADS)

    Giesbrecht, K. E.; Miller, L. A.; Zimmermann, S.; Carmack, E.; Johnson, W. K.; Macdonald, R. W.; McLaughlin, F.; Mucci, A.; Williams, W. J.; Wong, C. S.; Yamamoto-Kawai, M.

    2013-06-01

    We have assembled and conducted primary quality control on previously publically-unavailable water column measurements of the dissolved inorganic carbon system and associated biogeochemical parameters (oxygen, nutrients, etc.) made on 25 cruises in the subarctic and Arctic regions dating from as far back as 1974. The measurements are primarily from the western side of the Canadian Arctic, but also include data ranging from the North Pacific to the Gulf of St. Lawrence. The data were subjected to primary quality control (QC) to identify outliers and obvious errors. This dataset incorporates over four thousand individual measurements of total inorganic carbon (TIC), alkalinity, and pH from the Canadian Arctic over a period of more than 30 yr and provides an opportunity to increase our understanding of temporal changes in the inorganic carbon system in northern waters and the Arctic Ocean. The dataset is available for download on the CDIAC website: http://cdiac.ornl.gov/ftp/oceans/IOS_Arctic_Database/ (doi:10.3334/CDIAC/OTG.IOS_ARCT_CARBN).

  19. Basalt Weathering, Nutrient Uptake, And Carbon Release By An Exotic And A Native Arizona Grass Species Under Different Temperature Conditions

    NASA Astrophysics Data System (ADS)

    Gallas, G.; Dontsova, K.; Chorover, J.; Hunt, E.; Ravi, S.

    2010-12-01

    basalt weathering. All of the leachate samples showed higher pH than the input water, and the pH was elevated in treatments that contained grass. This indicated that in the presence of vegetation there was more proton absorption. The trends in total nitrogen concentrations indicate a dependence on temperature; the same can be said of anion concentrations. Anion leaching is lower at higher temperatures possibly due to greater plant uptake. Both organic and inorganic carbon concentrations were found to be higher in grass treatments than in control treatments. Because both dissolved CO2 and soluble organic exudates encourage mineral dissolution, this could be causative of the weathering enhancements observed. Denudation of nutrient elements differed between plant species and between temperatures, possibly relating to plant uptake and secondary mineral formation. This study gives unique insight into plant-mineral interactions as a function of plant species and temperature that is essential for understanding Earth systems under changing climate.

  20. Beyond temperature: Clumped isotope signatures in dissolved inorganic carbon species and the influence of solution chemistry on carbonate mineral composition

    NASA Astrophysics Data System (ADS)

    Tripati, Aradhna K.; Hill, Pamela S.; Eagle, Robert A.; Mosenfelder, Jed L.; Tang, Jianwu; Schauble, Edwin A.; Eiler, John M.; Zeebe, Richard E.; Uchikawa, Joji; Coplen, Tyler B.; Ries, Justin B.; Henry, Drew

    2015-10-01

    "Clumped-isotope" thermometry is an emerging tool to probe the temperature history of surface and subsurface environments based on measurements of the proportion of 13C and 18O isotopes bound to each other within carbonate minerals in 13C18O16O22- groups (heavy isotope "clumps"). Although most clumped isotope geothermometry implicitly presumes carbonate crystals have attained lattice equilibrium (i.e., thermodynamic equilibrium for a mineral, which is independent of solution chemistry), several factors other than temperature, including dissolved inorganic carbon (DIC) speciation may influence mineral isotopic signatures. Therefore we used a combination of approaches to understand the potential influence of different variables on the clumped isotope (and oxygen isotope) composition of minerals. We conducted witherite precipitation experiments at a single temperature and at varied pH to empirically determine 13C-18O bond ordering (Δ47) and δ18O of CO32- and HCO3- molecules at a 25 °C equilibrium. Ab initio cluster models based on density functional theory were used to predict equilibrium 13C-18O bond abundances and δ18O of different DIC species and minerals as a function of temperature. Experiments and theory indicate Δ47 and δ18O compositions of CO32- and HCO3- ions are significantly different from each other. Experiments constrain the Δ47-δ18O slope for a pH effect (0.011 ± 0.001; 12 ⩾ pH ⩾ 7). Rapidly-growing temperate corals exhibit disequilibrium mineral isotopic signatures with a Δ47-δ18O slope of 0.011 ± 0.003, consistent with a pH effect. Our theoretical calculations for carbonate minerals indicate equilibrium lattice calcite values for Δ47 and δ18O are intermediate between HCO3- and CO32-. We analyzed synthetic calcites grown at temperatures ranging from 0.5 to 50 °C with and without the enzyme carbonic anhydrase present. This enzyme catalyzes oxygen isotopic exchange between DIC species and is present in many natural systems. The two

  1. Responses of carbon uptake and oceanic pCO2 to climate change in the North Atlantic: A model study with the Bergen Earth System Model

    NASA Astrophysics Data System (ADS)

    Goris, Nadine; Tjiputra, Jerry; Schwinger, Jörg; Heinze, Christoph

    2015-10-01

    Several model studies diagnose the carbon uptake of the North Atlantic as most sensitive to climate change when considered per unit area. Yet the main drivers of the modeled sensitivity and the share of biological production and physical transport are under debate. In order to contribute to this ongoing discussion, two simulations with the Bergen Earth System Model were carried out for period 1850-2099. One of the simulations (COU) includes the radiative effect of rising CO2 (i.e., climate change), while the second simulation (BGC) excludes this effect. The modeled carbon fluxes show substantially different responses to climate change for different parts of the North Atlantic. Based on these differences, we divide the North Atlantic into two regions, namely, the subpolar gyre (SPG) and the rest of the North Atlantic (rNAT*, covering mainly the subtropical gyre). The highest climate sensitivity is found in the SPG region (accounting for an uptake reduction of 8.06 Pg C over the period 1850-2099), while the response of the rNAT* region is moderate (reduction of 4.00 Pg C). We show that the changing CO2 fluxes in both SPG and rNAT* regions are driven by increasing oceanic pCO2. The pCO2 changes in the rNAT* region are caused by both changing physical and biogeochemical processes, while changes in dissolved inorganic carbon (DIC) and alkalinity are the primary contributor to the high climate sensitivity of the SPG region. We identify a reduced biological production to be responsible for the modeled response of DIC and alkalinity, yet the differences between biological contribution and contributions of ocean circulation and CO2 uptake are small, highlighting our need for a better understanding of the marine biological cycle.

  2. Tailoring the Pore Environment of Metal-Organic and Molecular Materials Decorated with Inorganic Anions: Platforms for Highly Selective Carbon Capture

    NASA Astrophysics Data System (ADS)

    Nugent, Patrick S.

    Due to their high surface areas and structural tunability, porous metal-organic materials, MOMs, have attracted wide research interest in areas such as carbon capture, as the judicious choice of molecular building block (MBB) and linker facilitates the design of MOMs with myriad topologies and allows for a systematic variation of the pore environment. Families of MOMs with modular components, i.e. MOM platforms, are eminently suitable for targeting the selective adsorption of guest molecules such as CO2 because their pore size and pore functionality can each be tailored independently. MOMs with saturated metal centers (SMCs) that promote strong yet reversible CO2 binding in conjunction with favorable adsorption kinetics are an attractive alternative to MOMs containing unsaturated metal centers (UMCs) or amines. Whereas MOMs with SMCs and exclusively organic linkers typically have poor CO2 selectivity, it has been shown that a versatile, long known platform with SMCs, pillared square grids with inorganic anion pillars and pcu topology, exhibits high and selective CO 2 uptake, a moderate CO2 binding affinity, and good stability under practical conditions. As detailed herein, the tuning of pore size and pore functionality in this platform has modulated the CO2 adsorption properties and revealed variants with unprecedented selectivity towards CO 2 under industrially relevant conditions, even in the presence of moisture. With the aim of tuning pore chemistry while preserving pore size, we initially explored the effect of pillar substitution upon the carbon capture properties of a pillared square grid, [Cu(bipy)2(SiF6)] (SIFSIX-1-Cu). Room temperature CO2, CH4, and N 2 adsorption isotherms revealed that substitution of the SiF6 2- ("SIFSIX") inorganic pillar with TiF6 2- ("TIFSIX") or SnF62- ("SNIFSIX") modulated CO2 uptake, CO2 affinity (heat of adsorption, Qst), and selectivity vs. CH4 and N2. TIFSIX-1-Cu and SNIFSIX-1-Cu were calculated to exhibit the highest CO2/N 2

  3. Sources and Dynamics of Inorganic Carbon within the Upper Reaches of the Xi River Basin, Southwest China

    PubMed Central

    Zou, Junyu

    2016-01-01

    The carbon isotopic composition (δ13C) of dissolved and particulate inorganic carbon (DIC; PIC) was used to compare and analyze the origin, dynamics and evolution of inorganic carbon in two headwater tributaries of the Xi River, Southwest China. Carbonate dissolution and soil CO2 were regarded as the primary sources of DIC on the basis of δ13CDIC values which varied along the Nanpan and Beipan Rivers, from −13.9‰ to 8.1‰. Spatial trends in DIC differed between the two rivers (i.e., the tributaries), in part because factors controlling pCO2, which strongly affected carbonate dissolution, differed between the two river basins. Transport of soil CO2 and organic carbon through hydrologic conduits predominately controlled the levels of pCO2 in the Nanpan River. However, pCO2 along the upper reaches of the Nanpan River also was controlled by the extent of urbanization and industrialization relative to agriculture. DIC concentrations in the highly urbanized upper reaches of the Nanpan River were typical higher than in other carbonate-dominated areas of the upper Xi River. Within the Beipan River, the oxidation of organic carbon is the primary process that maintains pCO2 levels. The pCO2 within the Beipan River was more affected by sulfuric acid from coal industries, inputs from a scenic spot, and groundwater than along the Nanpan River. With regards to PIC, the contents and δ13C values in the Nanpan River were generally lower than those in the Beipan River, indicating that chemical and physical weathering contributes more marine carbonate detritus to the PIC along the Beipan River. The CO2 evasion flux from the Nanpan River was higher than that in the Beipan River, and generally higher than along the middle and lower reaches of the Xi River, demonstrating that the Nanpan River is an important net source of atmospheric CO2 in Southwest China. PMID:27513939

  4. Sources and Dynamics of Inorganic Carbon within the Upper Reaches of the Xi River Basin, Southwest China.

    PubMed

    Zou, Junyu

    2016-01-01

    The carbon isotopic composition (δ13C) of dissolved and particulate inorganic carbon (DIC; PIC) was used to compare and analyze the origin, dynamics and evolution of inorganic carbon in two headwater tributaries of the Xi River, Southwest China. Carbonate dissolution and soil CO2 were regarded as the primary sources of DIC on the basis of δ13CDIC values which varied along the Nanpan and Beipan Rivers, from -13.9‰ to 8.1‰. Spatial trends in DIC differed between the two rivers (i.e., the tributaries), in part because factors controlling pCO2, which strongly affected carbonate dissolution, differed between the two river basins. Transport of soil CO2 and organic carbon through hydrologic conduits predominately controlled the levels of pCO2 in the Nanpan River. However, pCO2 along the upper reaches of the Nanpan River also was controlled by the extent of urbanization and industrialization relative to agriculture. DIC concentrations in the highly urbanized upper reaches of the Nanpan River were typical higher than in other carbonate-dominated areas of the upper Xi River. Within the Beipan River, the oxidation of organic carbon is the primary process that maintains pCO2 levels. The pCO2 within the Beipan River was more affected by sulfuric acid from coal industries, inputs from a scenic spot, and groundwater than along the Nanpan River. With regards to PIC, the contents and δ13C values in the Nanpan River were generally lower than those in the Beipan River, indicating that chemical and physical weathering contributes more marine carbonate detritus to the PIC along the Beipan River. The CO2 evasion flux from the Nanpan River was higher than that in the Beipan River, and generally higher than along the middle and lower reaches of the Xi River, demonstrating that the Nanpan River is an important net source of atmospheric CO2 in Southwest China. PMID:27513939

  5. Efficiency of photosynthetic water oxidation at ambient and depleted levels of inorganic carbon.

    PubMed

    Shevela, Dmitriy; Nöring, Birgit; Koroidov, Sergey; Shutova, Tatiana; Samuelsson, Göran; Messinger, Johannes

    2013-11-01

    Over 40 years ago, Joliot et al. (Photochem Photobiol 10:309-329, 1969) designed and employed an elegant and highly sensitive electrochemical technique capable of measuring O2 evolved by photosystem II (PSII) in response to trains of single turn-over light flashes. The measurement and analysis of flash-induced oxygen evolution patterns (FIOPs) has since proven to be a powerful method for probing the turnover efficiency of PSII. Stemler et al. (Proc Natl Acad Sci USA 71(12):4679-4683, 1974), in Govindjee's lab, were the first to study the effect of "bicarbonate" on FIOPs by adding the competitive inhibitor acetate. Here, we extend this earlier work by performing FIOPs experiments at various, strictly controlled inorganic carbon (Ci) levels without addition of any inhibitors. For this, we placed a Joliot-type bare platinum electrode inside a N2-filled glove-box (containing 10-20 ppm CO2) and reduced the Ci concentration simply by washing the samples in Ci-depleted media. FIOPs of spinach thylakoids were recorded either at 20-times reduced levels of Ci or at ambient Ci conditions (390 ppm CO2). Numerical analysis of the FIOPs within an extended Kok model reveals that under Ci-depleted conditions the miss probability is discernibly larger (by 2-3 %) than at ambient conditions, and that the addition of 5 mM HCO3 (-) to the Ci-depleted thylakoids largely restores the original miss parameter. Since a "mild" Ci-depletion procedure was employed, we discuss our data with respect to a possible function of free or weakly bound HCO3 (-) at the water-splitting side of PSII. PMID:23828399

  6. Seasonal inorganic carbon dynamic in two coastal systems in Cadiz Bay: CO2 emissions estimation

    NASA Astrophysics Data System (ADS)

    Burgos, Macarena; Sierra, Ana; Forja, Jesús; Ortega, Teodora

    2014-05-01

    Seasonal variations of partial pressure of CO2 (pCO2) have been estimated in two coastal systems in Cadiz Bay (Rio San Pedro Creek and Sancti Petri Channel). Chlorophyll, nutrients, dissolved oxygen and total organic matter were analyzed as additional parameters. Rio San Pedro Creek is essentially a marine system since it is tidally controlled. The area receives long amount of organic matter from several fish farms distributed on its banks discharging effluents without previous treatment. Nine sampling stations are distributed along this system 12 Km length. Sancti Petri Channel is a flow channel-ebb tides extending from the inner Cadiz Bay to the Atlantic Ocean along 17 Km, where it has been established 11 sampling stations. There exist different organic matter inputs from aquaculture effluents and sewage discharges coming through the Iro River, which flows into the Channel central part. In addition there are natural organic matter inputs from surrounding marshes. pCO2 vary widely between 410 and 1272 µatm along the year 2013. Gas concentration increase toward the inner zone of Rio San Pedro Creek, and next to Iro River's moth in Sancti Petri tidal Channel. Both environments show seasonal variations of CO2 fluxes with a mean value of 6.8 mmol m-2 d-1. Therefore, the aquatic systems act as CO2 sources into the atmosphere. The contribution of dissolved organic compounds on the total alkalinity (TA) and the dissolved inorganic carbon (DIC) have been investigated in the two coastal zones. Typical variation range for this contribution has been found between 100 and 300 μM for both systems. The studied variables are affected by several organic matter inputs, such as sewage, drainage of marshes or fish farms.

  7. On-site isotopic analysis of dissolved inorganic carbon using an isotope ratio infrared spectrometer

    NASA Astrophysics Data System (ADS)

    Stoltmann, Tim; Mandic, Magda; Stöbener, Nils; Wapelhorst, Eric; Aepfler, Rebecca; Hinrichs, Kai-Uwe; Taubner, Heidi; Jost, Hj; Elvert, Marcus

    2016-04-01

    An Isotope Ratio Infrared Spectrometer (IRIS) has been adapted to perform measurements of δ13C of dissolved inorganic carbon (DIC) in marine pore waters. The resulting prototype allowed highly automated analysis of δ13C isotopic ratios and CO2 concentration. We achieved a throughput of up to 70 samples per day with DIC contents as low as 1.7 μmol C. We achieved an internal precision of 0.066 ‰ and an external precision of 0.16 ‰, which is comparable to values given for Isotope Ratio Mass Spectrometers (IRMS). The prototype instrument is field deployable, suitable for shipboard analysis of deep sea core pore waters. However, the validation of the prototype was centered around a field campaign in Eckernförde Bay, NW- Baltic Sea. As a proof of concept, a shallow site within an area of submarine groundwater discharge (SGD) and a site outside this area was investigated. We present profiles of δ13C of DIC over 50 cm exhibiting well understood methane turnover processes (anaerobic oxidation of methane). At the lowest point below the seafloor, microbial reduction of CO2 to CH4 dominates. 12CO2 is reduced preferentially over 13CO2, leading to more positive δ13C values in the remaining DIC pool; in layers closer to the surface, the oxidation of CH4 to CO2 becomes more prominent. Since the CH4 pool is enriched in 12C a shift to more negative δ13C can be observed in the DIC pool. In the upper 15 cm, the pore water DIC mixes with the sea water DIC, increasing δ13C again. Finally, we will present recent developments to further improve performance and future plans for deployments on research cruises.

  8. Climatological variations of total alkalinity and total dissolved inorganic carbon in the Mediterranean Sea surface waters

    NASA Astrophysics Data System (ADS)

    Gemayel, E.; Hassoun, A. E. R.; Benallal, M. A.; Goyet, C.; Rivaro, P.; Abboud-Abi Saab, M.; Krasakopoulou, E.; Touratier, F.; Ziveri, P.

    2015-12-01

    A compilation of data from several cruises between 1998 and 2013 was used to derive polynomial fits that estimate total alkalinity (AT) and total dissolved inorganic carbon (CT) from measurements of salinity and temperature in the Mediterranean Sea surface waters. The optimal equations were chosen based on the 10-fold cross-validation results and revealed that second- and third-order polynomials fit the AT and CT data respectively. The AT surface fit yielded a root mean square error (RMSE) of ± 10.6 μmol kg-1, and salinity and temperature contribute to 96 % of the variability. Furthermore, we present the first annual mean CT parameterization for the Mediterranean Sea surface waters with a RMSE of ± 14.3 μmol kg-1. Excluding the marginal seas of the Adriatic and the Aegean, these equations can be used to estimate AT and CT in case of the lack of measurements. The identified empirical equations were applied on the 0.25° climatologies of temperature and salinity, available from the World Ocean Atlas 2013. The 7-year averages (2005-2012) showed that AT and CT have similar patterns with an increasing eastward gradient. The variability is influenced by the inflow of cold Atlantic waters through the Strait of Gibraltar and by the oligotrophic and thermohaline gradient that characterize the Mediterranean Sea. The summer-winter seasonality was also mapped and showed different patterns for AT and CT. During the winter, the AT and CT concentrations were higher in the western than in the eastern basin. The opposite was observed in the summer where the eastern basin was marked by higher AT and CT concentrations than in winter. The strong evaporation that takes place in this season along with the ultra-oligotrophy of the eastern basin determines the increase of both AT and CT concentrations.

  9. On-site isotopic analysis of dissolved inorganic carbon using an isotope ratio infrared spectrometer

    NASA Astrophysics Data System (ADS)

    Jost, H. J. H.; Stoltmann, T.; Stöbener, N.; Wapelhorst, E.; Mandic, M.; Aepfler, R.; Hinrichs, K. U.; Taubner, H.; Elvert, M.

    2015-12-01

    An Isotope Ratio Infrared Spectrometer (IRIS) has been adapted to perform measurements of δ13C of dissolved inorganic carbon (DIC) in marine pore waters. The resulting prototype allowed highly automated analysis of δ13C isotopic ratios and CO2 concentration. We achieved a throughput of up to 70 samples per day with DIC contents as low as 1.7 μmol C. We achieved an internal precision of 0.066 ‰ and an external precision of 0.16 ‰, which is comparable to values given for Isotope Ratio Mass Spectrometers (IRMS). The prototype instrument is field deployable, suitable for shipboard analysis of deep sea core pore waters. However, the validation of the prototype was centered around a field campaign in Eckernförde Bay, NW- Baltic Sea. As a proof of concept, a shallow site within an area of submarine groundwater discharge (SGD) and a site outside this area was investigated. We present profiles of δ13C of DIC over 50 cm exhibiting well understood methane turnover processes (anaerobic oxidation of methane). At the lowest point below the seafloor, microbial reduction of CO2 to CH4 dominates. 12CO2 is reduced preferentially over 13CO2, leading to more positive δ13C values in the remaining DIC pool; in layers closer to the surface, the oxidation of CH4 to CO2 becomes more prominent. Since the CH4 pool is enriched in 12C a shift to more negative δ13C can be observed in the DIC pool. In the upper 15 cm, the pore water DIC mixes with the sea water DIC, increasing δ13C again. Finally, we will present recent developments to further improve performance and future plans for deployments on research cruises.

  10. Uptake of inorganic and organic derivatives of arsenic associated with induced cytotoxic and genotoxic effects in Chinese hamster ovary (CHO) cells.

    PubMed

    Dopp, E; Hartmann, L M; Florea, A-M; von Recklinghausen, U; Pieper, R; Shokouhi, B; Rettenmeier, A W; Hirner, A V; Obe, G

    2004-12-01

    Humans are exposed to arsenic and their organic derivatives, which are widely distributed in the environment, via food, water, and to a lesser extent, via air. Following uptake, inorganic arsenic undergoes biotransformation to mono- and dimethylated metabolites. Recent findings suggest that the methylation reactions represent a toxification rather than a detoxification pathway. In the present study, the genotoxic effects and the cellular uptake of inorganic arsenic [arsenate, As(i)(V); arsenite, As(i)(III)] and the methylated arsenic species monomethylarsonic acid [MMA(V)], monomethylarsonous acid [MMA(III)], dimethylarsinic acid [DMA(V)], dimethylarsinous acid [DMA(III)], trimethylarsenic oxide [TMAO(V)] were investigated in Chinese hamster ovary (CHO-9) cells. The chemicals were applied at different concentrations (0.1 microM to 10 mM) for 30 min and 1 h, respectively. Cytotoxic effects were investigated by the trypan blue extrusion test and genotoxic effects by the assessment of micronucleus (MN) induction, chromosome aberrations (CA), and sister chromatid exchanges (SCE). Intracellular arsenic concentrations were determined by ICP-MS techniques. Our results show that MMA(III) and DMA(III) induce cytotoxic and genotoxic effects to a greater extent than MMA(V) or DMA(V). Viability was significantly decreased after incubation (1 h) of the cells with > or = 1 microM As(i)(III), > or = 1 microM As(i)(V), > or = 500 microM MMA(III), > or = 100 microM MMA(V), and 500 microM DMA(V) and > or = 0.1 microM DMA(III). TMAO(V) was not cytotoxic at concentrations up to 10 mM. A significant increase of the number of MN, CA and SCE was found for DMA(III) and MMA(III). As(i)(III + V) induced CA and SCE but no MN. TMAO(V), MMA(V) and DMA(V) were not genotoxic in the concentration range tested (up to 5 mM). The nuclear division index (NDI) was not affected by any of the tested arsenic compounds after a recovery period of 14 to 35 h. When the uptake of the chemicals was measured by

  11. Comparison of Inorganic Carbon System Parameters Measured in the Atlantic Ocean from 1990 to 1998 and Recommended Adjustments

    SciTech Connect

    Wanninkhof, R.

    2003-05-21

    As part of the global synthesis effort sponsored by the Global Carbon Cycle project of the National Oceanic and Atmospheric Administration (NOAA) and U.S. Department of Energy, a comprehensive comparison was performed of inorganic carbon parameters measured on oceanographic surveys carried out under auspices of the Joint Global Ocean Flux Study and related programs. Many of the cruises were performed as part of the World Hydrographic Program of the World Ocean Circulation Experiment and the NOAA Ocean-Atmosphere Carbon Exchange Study. Total dissolved inorganic carbon (DIC), total alkalinity (TAlk), fugacity of CO{sub 2}, and pH data from twenty-three cruises were checked to determine whether there were systematic offsets of these parameters between cruises. The focus was on the DIC and TAlk state variables. Data quality and offsets of DIC and TAlk were determined by using several different techniques. One approach was based on crossover analyses, where the deep-water concentrations of DIC and TAlk were compared for stations on different cruises that were within 100 km of each other. Regional comparisons were also made by using a multiple-parameter linear regression technique in which DIC or TAlk was regressed against hydrographic and nutrient parameters. When offsets of greater than 4 {micro}mol/kg were observed for DIC and/or 6 {micro}mol/kg were observed for TAlk, the data taken on the cruise were closely scrutinized to determine whether the offsets were systematic. Based on these analyses, the DIC data and TAlk data of three cruises were deemed of insufficient quality to be included in the comprehensive basinwide data set. For several of the cruises, small adjustments in TAlk were recommended for consistency with other cruises in the region. After these adjustments were incorporated, the inorganic carbon data from all cruises along with hydrographic, chlorofluorocarbon, and nutrient data were combined as a research quality product for the scientific community.

  12. Experimentally-controlled carbon and oxygen isotope exchange between bioapatites and water under inorganic and microbially-mediated conditions

    NASA Astrophysics Data System (ADS)

    Zazzo, Antoine; Lécuyer, Christophe; Mariotti, André

    2004-01-01

    Modern bone and enamel powders have reacted at 301 K with 13C- and 18O-labelled waters under inorganic and microbial conditions. The aim of the study is to investigate the resistance of stable isotope compositions of bioapatite carbonate (δ 13C, δ 18Oc) and phosphate (δ 18Op) to isotopic alteration during early diagenesis. Rapid and significant carbon and oxygen isotope changes were observed in the carbonate and phosphate fractions of bone apatite before any detectable change occurred in the crystallinity or organic matter content. These observations indicate that chemical alterations of bone apatite are likely to start within days of death. Enamel crystallites are much more resistant than bone crystallites, but are not exempt of alteration. Non removable carbon and oxygen isotope enrichments were measured in the carbonate phase of bone (50-90%) and enamel (40%) after the acetic acid treatment. This result indicates that a significant part of 13C and 18O-labelled coming from the aqueous fluid has been durably incorporated into the apatite structure, probably through isotopic exchange or secondary carbonate apatite precipitation. As a result, acetic acid pre-treatments that are currently used to remove exogenous material by selective dissolution, are not adequate to restore pristine δ 13C and δ 18Oc values of fossil apatites. Under inorganic conditions, kinetics of oxygen isotope exchange are 10 times faster in carbonate than in phosphate. On the opposite, during biologically-mediated reactions, the kinetics of oxygen isotope exchange between phosphate and water is, at least, from 2 to 15 times faster than between carbonate and water. Enamel is a more suitable material than bone for paleoenvironmental or paleoclimatical reconstructions, but interpretations of δ 18Op or δ 13C values must be restricted to specimens for which no or very limited trace of microbial activity can be detected.

  13. Dissolved inorganic and organic carbon yields and fluxes in a permafrost catchment on the Qinghai-Tibet Plateau

    NASA Astrophysics Data System (ADS)

    Wang, G.; Mao, T.; Zhang, T.; Chen, X.

    2015-12-01

    Riverine transport of carbon from terrestrial to the aquatic ecosystems is an important component of the global carbon cycle. A warming climate can inevitably accelerate the microbial breakdown of organic carbon and the release of carbon dioxide especially in frozen soils (permafrost) within Arctic and sub-Arctic regions. In addition, high hydraulic conductivity and low sorption capacity of the shallow soil active layer overlying impermeable permafrost together lead to quick DOM transport to streams. In different regions, the response of dissolved carbon to climate warming is different due to the differences in hydrology, climatic conditions, soil types, vegetation conditions, permafrost distribution, catchment size, flow paths. The Qinghai-Tibet Plateau (QTP), of which a significant portion is underlain by permafrost, is considered to be more sensitive to climatic warming than other regions. However, the knowledge of dissolved inorganic and organic carbon transport in the QTP is very limited. We compared the yields and fluxes of DIC/DOC in a small tropical permafrost catchment. Our results showed that: (1) the concentrations ranged from 7.8 to 30.9 mg L-1 for the DIC and ranged from 2.3 to 6.4 mg L-1 for the DOC, the ratio of DIC/DOC concentrations ranged from 2.2 to 5.7 with a mean value of 4.3; (2) the annual export approximately 3.56 t km-2 year-1 for the DIC and 0.73 t km-2 year-1 for the DOC, indicating that the dissolved carbon transported in majority under the inorganic form; (3) the seasonal variations in DIC/DOC export are strongly regulated by variability in runoff, meanwhile the concentration of DIC/DOC showed significant positive correlation with the thawing depth of the active layer and vegetation coverage. Our results provided an understanding about the characteristics of riverine dissolved carbons transport at a permafrost catchment scale on the QTP.

  14. Contributions of secondary forest and nitrogen dynamics to terrestrial carbon uptake

    NASA Astrophysics Data System (ADS)

    Yang, X.; Richardson, T. K.; Jain, A. K.

    2010-10-01

    We use a terrestrial carbon-nitrogen cycle component of the Integrated Science Assessment Model (ISAM) to investigate the impacts of nitrogen dynamics on regrowing secondary forests over the 20th century. We further examine what the impacts of nitrogen deposition and land use change history are on terrestrial carbon uptake since preindustrial time. Our results suggest that global total net land use emissions for the 1990s associated with changes in cropland, pastureland, and wood harvest are 1.22 GtC/yr. Without considering the secondary forest regrowth, the estimated net global total land use emissions are 1.58 GtC/yr or about 0.36 GtC/yr higher than if secondary forest regrowth is considered. Results also show that without considering the nitrogen dynamics and deposition, the estimated global total secondary forest sink for the 1990s is 0.90 GtC/yr or about 0.54 GtC/yr higher than estimates that include the impacts of nitrogen dynamics and deposition. Nitrogen deposition alone is responsible for about 0.13 GtC/yr of the total secondary forest sink. While nitrogen is not a limiting nutrient in the intact primary forests in tropical regions, our study suggests that nitrogen becomes a limiting nutrient for regrowing secondary forests of the tropical regions, in particular Latin America and Tropical Africa. This is because land use change activities, especially wood harvest, removes large amounts of nitrogen from the system when slash is burnt or wood is removed for harvest. However, our model results show that carbon uptake is enhanced in the tropical secondary forests of the Indian region. We argue that this may be due to enhanced nitrogen mineralization and increased nitrogen availability following land use change in the Indian tropical forest ecosystems. Results also demonstrate that there is a significant amount of carbon accumulating in the Northern Hemisphere where most land use changes and forest regrowth has occurred in recent decades. This study indicates

  15. Contributions of secondary forest and nitrogen dynamics to terrestrial carbon uptake

    NASA Astrophysics Data System (ADS)

    Yang, X.; Richardson, T. K.; Jain, A. K.

    2010-04-01

    We use a terrestrial carbon-nitrogen cycle component of the Integrated Science Assessment Model (ISAM) to investigate the impacts of nitrogen dynamics on regrowing secondary forests over the 20th century. We further examine what the impacts of nitrogen deposition and land use change history are on terrestrial carbon uptake since preindustrial time. Our results suggest that global total net land use emissions for the 1990s associated with changes in cropland, pastureland, and wood harvest are 1.22 GtC/yr. Without considering the secondary forest regrowth, the estimated net global total land use emissions are 1.58 GtC/yr or about 0.36 GtC/yr higher than if secondary forest regrowth is considered. Results also show that without considering the nitrogen dynamics and deposition, the estimated global total secondary forest sink for the 1990s is 0.90 GtC/yr or about 0.54 GtC/yr higher than estimates that include the impacts of nitrogen dynamics and deposition. Nitrogen deposition alone is responsible for about 0.13 GtC/yr of the total secondary forest sink. While nitrogen is not a limiting nutrient in the intact primary forests in tropical regions, our study suggests that nitrogen becomes a limiting nutrient for regrowing secondary forests of the tropical regions, in particular Latin America and Tropical Africa. This is because land use change activities, especially wood harvest, removes large amounts of nitrogen from the system when slash is burnt or wood is removed for harvest. However, our model results show that carbon uptake is enhanced in the tropical secondary forests of the Indian region. We argue that this may be due to enhanced nitrogen mineralization and increased nitrogen availability following land use change in the Indian tropical forest ecosystems. Results also demonstrate that there is a significant amount of carbon accumulating in the Northern Hemisphere where most land use changes and forest regrowth has occurred in recent decades. This study indicates

  16. Effect of long-term drought on carbon allocation and nitrogen uptake of Pinus sylvestris seedlings

    NASA Astrophysics Data System (ADS)

    Pumpanen, Jukka; Aaltonen, Heidi; Lindén, Aki; Köster, Kajar; Biasi, Christina; Heinonsalo, Jussi

    2015-04-01

    Weather extremes such as drought events are expected to increase in the future as a result of climate change. The drought affects the allocation of carbon assimilated by plants e.g. by modifying the root to shoot ratio, amount of fine roots and the amount of mycorrhizal fungal hyphae. We studied the effect of long term drought on the allocation of carbon in a common garden experiment with 4-year-old Pinus sylvestris seedlings. Half of the seedlings were exposed to long-term drought by setting the soil water content close to wilting point for over two growing seasons whereas the other half was grown in soil close to field capacity. We conducted a pulse labelling with 13CO2 in the end of the study by injecting a known amount of 13C enriched CO2 to the seedlings and measuring the CO2 uptake and distribution of 13C to the biomass of the seedlings and to the root and rhizosphere respiration. In addition, we studied the effect of drought on the decomposition of needle litter and uptake of nitrogen by 15N labelled needles buried in the soil in litter bags. The litterbags were collected and harvested in the end of the experiment and the changes in microbial community in the litterbags were studied from the phospholipid fatty acid (PLFA) composition. We also determined the 15N isotope concentrations from the needles of the seedlings to study the effect of drought on the nitrogen uptake of the seedlings. Our results indicate that the drought had a significant effect both on the biomass allocation of the seedlings and on the microbial species composition. The amount of carbon allocated belowground was much higher in the seedlings exposed to drought compared to the control seedlings. The seedlings seemed to adapt their carbon allocation to long-term drought to sustain adequate needle biomass and water uptake. The seedlings also adapted their osmotic potential and photosynthesis capacity to sustain the long-term drought as was indicated by the measurements of osmotic potential

  17. Distributions of dissolved organic and inorganic carbon and radiocarbon in the eastern North Pacific continental margin

    NASA Astrophysics Data System (ADS)

    Bauer, James E.; Druffel, Ellen R. M.; Wolgast, David M.; Griffin, Sheila; Masiello, Caroline A.

    Temporal variations in the natural radiocarbon ( 14C) signatures of dissolved organic and inorganic carbon (DOC and DIC, respectively) in seawater have been studied previously (Druffel, E.R.M., Bauer, J.E., Williams, P.M., Griffin, S., Wolgast, D.M., 1996. Seasonal variability of radiocarbon in particulate organic carbon in the northeast Pacific. J. Geophys. Res. 101, 20 543-20 552; Bauer, J.E., Druffel, E.R.M., Williams, P.M., Wolgast, D.M., Griffin, S., 1998. Temporal variability in dissolved organic carbon and radiocarbon in the eastern North Pacific Ocean. J. Geophys. Res. 103, 2867-2882) at a long-term time-series station (Sta. M: 32°N, 123W) in the eastern North Pacific located at the eastern edge of the North Pacific abyssal plain. In June 1995 a transect was made from Sta. M inshore to approximately 500 m depth in order to evaluate the distributions of 14C in DOC and DIC from the abyssal plain to the upper continental slope. Concentrations and Δ 14C values of DOC in mixed layer waters (25 and 85 m) decreased toward the upper slope. In deeper waters, concentrations and Δ 14C values were in general similar at all three sites. Differences in DOC concentrations and Δ 14C-DOC between Sta. M and the rise and upper slope sites were explained in part by the mixing of DOC and Δ 14C along constant density ( σt) surfaces. However, specific deviations from conservative behavior due to mixing were observed for Δ 14C-DOC at mesopelagic (˜700 m) and near-bottom (˜3600- 3900 m) depths of the continental rise. Comparable findings are reported for DIC, where σt-normalized concentrations and Δ 14C values in Sta. M, rise and upper slope waters were similar, with the exception of slight increases in concentrations and Δ 14C values in near-bottom waters of the rise. These observations indicate that both DOC and DIC in continental rise and slope surface waters of the eastern North Pacific Ocean margin are comprised of a component of actively upwelled material derived

  18. Carbon balance of conifer seedlings at timberline: relative changes in uptake, storage, and utilization.

    PubMed

    Bansal, S; Germino, M J

    2008-11-01

    Low rates of growth for conifers at high elevations may relate to problems in acquiring or utilizing carbon. A traditional hypothesis for growth limits of trees at alpine treeline is that low photosynthesis (A) leads to insufficient supply of carbon for growth. Alternatively, the sink-limitation hypothesis questions the importance of low A, and suggests that trees at treeline have abundant carbon for growth as a result of greater decreases in carbon use [respiration (R) and growth] than A at higher elevations. Concentrations of carbon intermediates (e.g., nonstructural carbohydrates, NSC) have been used to support the sink-limitation hypothesis, with the assumption that NSC reflects the ratio of carbon source to sinks. Our objective was to determine elevation effects on carbon balance (whole-plant uptake, storage, and efflux of carbon) of tree seedlings during their critical establishment phase at timberline. Changes in A and R (of whole crowns), NSC (starches and simple sugars), and growth were measured in seedlings of a treeline (Abies lasiocarpa) and nontreeline species (Pseudotsuga menziesii). Seedlings were outplanted at the lower (2,450 m) and upper (3,000 m) edges of the timberline zone in the Rocky Mountains, USA. At the upper compared with lower elevation, both species had 10-20% less root and needle growth, 13-15% less A, 35-39% less R, and up to 50% greater NSC. A. lasiocarpa allocated more biomass to needles and had greater A but less NSC than P. menziesii. The greater effects of elevation on R compared with A led to a 1.3-fold increase in A:R at the upper elevation, and a corresponding increase in starch (r2 = 0.42)-a pattern consistent with the predictions of the sink-limitation hypothesis. Nevertheless, A and dry mass gain were positively correlated (r2 = 0.42), indicating that variation in photosynthesis was related to growth of seedlings at timberline. PMID:18810499

  19. A Simple, Buoy Deployable Instrument for Accurate Dissolved Carbon Dioxide and Dissolved Inorganic Carbon Measurements in Freshwater and Marine Ecosystems

    NASA Astrophysics Data System (ADS)

    Browne, B. A.; Wyss, J. R.; Bowling, J. M.; Schueller, D. J.; Sherman, J. F.

    2007-05-01

    The need for better knowledge of (1) the oceanic sink for anthropogenic CO2, (2) the impact of anthropogenic CO2 on the oceanic CaCO3 system and (3) lake and stream metabolism in freshwater ecosystems is driving growing interest in real-time technologies to measure pCO2 and dissolved inorganic carbon (DIC). To be useful, these technologies must meet stringent data quality requirements of marine and freshwater biogeochemical research initiatives such as the Joint Global Ocean Flux Study, the Coral Reef Environmental Observatory Network, the National Ecological Observatory Network, and the Global Lake Ecological Observatory Network. In this presentation, we introduce new methodology and a device for unaccompanied measurement of pCO2 and DIC on research buoys or ocean/freshwater vessels. This small-scale, essentially "plug and play" device (shoe box size) has limited power requirements (≤1.8 amps) for continuous or discontinuous (e.g., one reading per hour) measurements and does not bio-foul. DIC and pCO2 can be measured in sequence using one infrared detector or in parallel using two. The accuracy and precision (<0.15% coefficient of variation) for pCO2 and DIC meet or approximate the data quality requirements for large-scale biogeochemical research initiatives. Training requirements are minimal, providing flexibility for deployments on multiple vessel types. The device works by induction of ebullition. A hydrostatic pressure drop upstream of a pump causes a temporary condition of gas oversaturation. The collection cell downstream of the pump then acts like an overpressurized soda bottle. As pressure is released within the collection cell, the dissolved gas streams passively and reliably into the infrared detector(s), at a nominal rate of 7 mL per minute, carrying CO2 into the cell essentially at its in-situ partial pressure. To measure DIC, a valve allows for the addition of acid to the sampling line upstream of the pump converting all DIC to CO2 prior to reaching

  20. Spring carbonate chemistry dynamics of surface waters in the northern East China Sea: Water mixing, biological uptake of CO2, and chemical buffering capacity

    NASA Astrophysics Data System (ADS)

    Zhai, Wei-Dong; Chen, Jian-Fang; Jin, Hai-Yan; Li, Hong-Liang; Liu, Jin-Wen; He, Xian-Qiang; Bai, Yan

    2014-09-01

    We investigated sea surface total alkalinity (TAlk), dissolved inorganic carbon (DIC), dissolved oxygen (DO), and satellite-derived chlorophyll-a in the connection between the Yellow Sea and the East China Sea (ECS) during April to early May 2007. In spring, Changjiang dilution water (CDW), ECS offshore water, and together with Yellow Sea water (YSW) occupied the northern ECS. Using 16 day composite satellite-derived chlorophyll-a images, several algal blooms were identified in the CDW and ECS offshore water. Correspondingly, biological DIC drawdown of 73 ± 20 μmol kg-1, oversaturated DO of 10-110 μmol O2 kg-1, and low fugacity of CO2 of 181-304 μatm were revealed in these two waters. YSW also showed CO2 uptake in spring, due to the very low temperature. However, its intrusion virtually counteracted CO2 uptake in the northern ECS. In the CDW and the ECS offshore water, Revelle factor was 9.3-11.7 and 8.9-10.6, respectively, while relatively high Revelle factor values of 11.4-13.0 were revealed in YSW. In the ECS offshore water, the observed relationship between DIC drawdown and oversaturated DO departed from the Redfield ratio, indicating an effect of chemical buffering capacity on the carbonate system during air-sea reequilibration. Given the fact that the chemical buffering capacity slows down the air-sea reequilibration of CO2, the early spring DIC drawdown may have durative effects on the sea surface carbonate system until early summer. Although our study is subject to limited temporal and spatial coverage of sampling, these insights are fundamental to understanding sea surface carbonate chemistry dynamics in this important ocean margin.

  1. Comparison of carbon dioxide uptake between inverse and bottom-up models over the Mountain West

    NASA Astrophysics Data System (ADS)

    Brooks, B.; Desai, A. R.; Stephens, B. B.

    2010-12-01

    An essential objective of the North American Carbon Program (NACP) has been to constrain carbon cycle sources and sinks in particular through land surface model intercomparison. Many of these bottom-up models estimate fluxes of carbon dioxide using remotely sensed satellite products such as fraction of Photosynthetically Active Radiation (fPAR) and Leaf Area Index (LAI), which are difficult to calibrate over the complex terrain and heterogeneous land cover of the United States Mountain West. Inverse methods that retrieve fluxes by assimilating in situ CO2 concentrations offer a different approach for estimating carbon dioxide exchange. In this study we compare CO2 fluxes between several models that participated in the NACP Regional and Continental Interim Synthesis and CarbonTracker, a nested grid tracer transport inverse model, over a domain that encompasses the Regional Atmospheric Continuous CO2 Network in the Rocky Mountains (RACCOON). An inverse to bottom-up model comparison over the RACCOON domain allows us to address several key questions: 'How do inverse and bottom-up models differ in CO2 uptake?', 'Do the inverse model - bottom-up model mismatches exceed error estimates?', and 'Does filtering-out CO2 observations representing local flows before assimilation by the inverse model reduce such discrepancies?'

  2. Influence of water availability on carbon uptake of two Mediterranean Holm oak forests

    NASA Astrophysics Data System (ADS)

    Magno, Ramona; Gioli, Beniamino; Primo Vaccari, Francesco; Canfora, Eleonora

    2010-05-01

    In the last decades changes in precipitation pattern were registered at global level as a consequence of temperature rise, with an increase in the intensity of precipitation events in many regions of the world. but also more intense and longer drought in others, and in particular in the Mediterranean basin. Climate changes can have direct influence on biological phenomena, like the earlier onset of spring and the lengthening of the growing season, playing a key role for the carbon fixation and for the amount of CO2 exchanged by the biosphere with the atmosphere. The impact of water availability variation on ecosystem functioning and carbon fluxes differs from species to species and depends on the period of occurrence. Mediterranean-type ecosystems (MTEs), which are mostly water and temperature-limited biomes and suffered prolonged and exacerbated human pressure, are particularly sensitive to changes in climate, as suggested by the observed decrease in plant productivity following recent heat waves and droughts events. Water availability for this region seems to be a crucial constraint for the net carbon assimilation, and biomes evolving in particularly negative soil and climatic conditions could be the most affected by changes in rainfall pattern. In this view a comparison between carbon uptake of two Holm oak (Quercus ilex L.) forests of Central Italy (Castelporziano-Rome and Lecceto-Siena), measured by eddy covariance technique, was done to analyze the possible adaptation to rainfall decrease. The two ecosystems are characterized by different soil water content of the upper soil layers, by the occurrence of a shallow water table in Castelporziano forest and by a strongly different net ecosystem exchange rate (NEE), with -360 gCm-2year-1 for Lecceto and -875 gCm-2year-1 for Castelporziano. The water supply of Lecceto was mostly driven by rainfall, reaching minimum values under 5% in particularly dry periods and increasing the carbon sink of the ecosystem after

  3. Cellular uptake mechanisms of functionalised multi-walled carbon nanotubes by 3D electron tomography imaging

    NASA Astrophysics Data System (ADS)

    Al-Jamal, Khuloud T.; Nerl, Hannah; Müller, Karin H.; Ali-Boucetta, Hanene; Li, Shouping; Haynes, Peter D.; Jinschek, Joerg R.; Prato, Maurizio; Bianco, Alberto; Kostarelos, Kostas; Porter, Alexandra E.

    2011-06-01

    Carbon nanotubes (CNTs) are being investigated for a variety of biomedical applications. Despite numerous studies, the pathways by which carbon nanotubes enter cells and their subsequent intracellular trafficking and distribution remain poorly determined. Here, we use 3-D electron tomography techniques that offer optimum enhancement of contrast between carbon nanotubes and the plasma membrane to investigate the mechanisms involved in the cellular uptake of shortened, functionalised multi-walled carbon nanotubes (MWNT-NH3+). Both human lung epithelial (A549) cells, that are almost incapable of phagocytosis and primary macrophages, capable of extremely efficient phagocytosis, were used. We observed that MWNT-NH3+ were internalised in both phagocytic and non-phagocytic cells by any one of three mechanisms: (a) individually via membrane wrapping; (b) individually by direct membrane translocation; and (c) in clusters within vesicular compartments. At early time points following intracellular translocation, we noticed accumulation of nanotube material within various intracellular compartments, while a long-term (14-day) study using primary human macrophages revealed that MWNT-NH3+ were able to escape vesicular (phagosome) entrapment by translocating directly into the cytoplasm.Carbon nanotubes (CNTs) are being investigated for a variety of biomedical applications. Despite numerous studies, the pathways by which carbon nanotubes enter cells and their subsequent intracellular trafficking and distribution remain poorly determined. Here, we use 3-D electron tomography techniques that offer optimum enhancement of contrast between carbon nanotubes and the plasma membrane to investigate the mechanisms involved in the cellular uptake of shortened, functionalised multi-walled carbon nanotubes (MWNT-NH3+). Both human lung epithelial (A549) cells, that are almost incapable of phagocytosis and primary macrophages, capable of extremely efficient phagocytosis, were used. We observed

  4. Intracellular uptake, trafficking and subcellular distribution of folate conjugated single walled carbon nanotubes within living cells

    NASA Astrophysics Data System (ADS)

    Kang, Bin; Yu, De-cai; Chang, Shu-quan; Chen, Da; Dai, Yao-dong; Ding, Yitao

    2008-09-01

    Herein we studied the uptake, trafficking and distribution of folate conjugated single walled carbon nanotubes (SWNTs) within living cells. SWNTs were noncovalently functionalized with chitosan and then linked with folate acid and fluorescence dye Alexa Fluor 488 (denoted FA-SWNTs). Hep G2 cells were cultured in vitro and incubated with FA-SWNTs at different levels. The FA-SWNTs exhibited a concentration-dependent uptake within Hep G2 cells, and Hep G2 cells were able to internalize FA-SWNTs via a folate receptor-mediated pathway. The distribution of nanotubes inside cells demonstrated that the FA-SWNTs only locate in the cytoplasm and not in nuclei, indicating the failure of transporting through the nuclear envelope. Transmission electron microscope (TEM) results showed the presence of FA-SWNTs in lysosomes and the discharge to extracellular space after incubation with nanotubes for 5 h. No obvious cellular death rate was observed when the concentration of nanotubes was below 50 µg ml-1. However, cells with FA-SWNT uptake showed a concentration-dependent apoptosis. These discoveries might be helpful for understanding the interaction of SWNTs and living cells.

  5. Mycorrhizal Controls on Nitrogen Uptake Drive Carbon Cycling at the Global Scale

    NASA Astrophysics Data System (ADS)

    Shi, M.; Fisher, J. B.; Brzostek, E. R.; Phillips, R.

    2015-12-01

    Nearly all plants form symbiotic relationships with one of two types of mycorrhizal fungi—arbuscular mycorrhizae (AM) and ectomycorrhizal (ECM) fungi, which are essential to global biogeochemical cycling of nutrient elements. In soils with higher rates of nitrogen and phosphorus mineralization from organic matter, AM-associated plants can be better adapted than ECM-associated plants. Importantly, the photosynthate costs of nutrient uptake for AM-associated plants are usually lower than that for ECM-associated plants. Thus, the global carbon cycle is closely coupled with mycorrhizal controls on N uptake. To investigate the potential climate dependence of terrestrial environments from AM- and ECM-associated plants, this study uses the Community Atmosphere Model (CAM) with a plant productivity-optimized N acquisition model—the Fixation and Uptake of Nitrogen (FUN) model—integrated into its land model—the Community Land Model (CLM). This latest version of CLM coupled with FUN allows for the assessment of mycorrhizal controls on global biogeochemical cycling. Here, we show how the historical evolution of AM- and ECM-associations altered regional and global biogeochemical cycling and climate, and future projections over the next century.

  6. Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3- Uptake Mutant of Synechocystis sp. PCC 6803.

    PubMed

    Orf, Isabel; Klähn, Stephan; Schwarz, Doreen; Frank, Marcus; Hess, Wolfgang R; Hagemann, Martin; Kopka, Joachim

    2015-11-01

    Cyanobacteria have efficient carbon concentration mechanisms and suppress photorespiration in response to inorganic carbon (Ci) limitation. We studied intracellular Ci limitation in the slow-growing CO2/HCO3 (-)-uptake mutant ΔndhD3 (for NADH dehydrogenase subunit D3)/ndhD4 (for NADH dehydrogenase subunit D4)/cmpA (for bicarbonate transport system substrate-binding protein A)/sbtA (for sodium-dependent bicarbonate transporter A): Δ4 mutant of Synechocystis sp. PCC 6803. When cultivated under high-CO2 conditions, ∆4 phenocopies wild-type metabolic and transcriptomic acclimation responses after the shift from high to low CO2 supply. The ∆4 phenocopy reveals multiple compensation mechanisms and differs from the preacclimation of the transcriptional Ci regulator mutant ∆ndhR (for ndhF3 operon transcriptional regulator). Contrary to the carboxysomeless ∆ccmM (for carbon dioxide concentrating mechanism protein M) mutant, the metabolic photorespiratory burst triggered by shifting to low CO2 is not enhanced in ∆4. However, levels of the photorespiratory intermediates 2-phosphoglycolate and glycine are increased under high CO2. The number of carboxysomes is increased in ∆4 under high-CO2 conditions and appears to be the major contributing factor for the avoidance of photorespiration under intracellular Ci limitation. The ∆4 phenocopy is associated with the deregulation of Ci control, an overreduced cellular state, and limited photooxidative stress. Our data suggest multiple layers of Ci regulation, including inversely regulated modules of antisense RNAs and cognate target messenger RNAs and specific trans-acting small RNAs, such as the posttranscriptional PHOTOSYNTHESIS REGULATORY RNA1 (PsrR1), which shows increased expression in ∆4 and is involved in repressing many photosynthesis genes at the posttranscriptional level. In conclusion, our insights extend the knowledge on the range of compensatory responses of Synechocystis sp. PCC 6803 to intracellular Ci

  7. Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3- Uptake Mutant of Synechocystis sp. PCC 6803.

    PubMed

    Orf, Isabel; Klähn, Stephan; Schwarz, Doreen; Frank, Marcus; Hess, Wolfgang R; Hagemann, Martin; Kopka, Joachim

    2015-11-01

    Cyanobacteria have efficient carbon concentration mechanisms and suppress photorespiration in response to inorganic carbon (Ci) limitation. We studied intracellular Ci limitation in the slow-growing CO2/HCO3 (-)-uptake mutant ΔndhD3 (for NADH dehydrogenase subunit D3)/ndhD4 (for NADH dehydrogenase subunit D4)/cmpA (for bicarbonate transport system substrate-binding protein A)/sbtA (for sodium-dependent bicarbonate transporter A): Δ4 mutant of Synechocystis sp. PCC 6803. When cultivated under high-CO2 conditions, ∆4 phenocopies wild-type metabolic and transcriptomic acclimation responses after the shift from high to low CO2 supply. The ∆4 phenocopy reveals multiple compensation mechanisms and differs from the preacclimation of the transcriptional Ci regulator mutant ∆ndhR (for ndhF3 operon transcriptional regulator). Contrary to the carboxysomeless ∆ccmM (for carbon dioxide concentrating mechanism protein M) mutant, the metabolic photorespiratory burst triggered by shifting to low CO2 is not enhanced in ∆4. However, levels of the photorespiratory intermediates 2-phosphoglycolate and glycine are increased under high CO2. The number of carboxysomes is increased in ∆4 under high-CO2 conditions and appears to be the major contributing factor for the avoidance of photorespiration under intracellular Ci limitation. The ∆4 phenocopy is associated with the deregulation of Ci control, an overreduced cellular state, and limited photooxidative stress. Our data suggest multiple layers of Ci regulation, including inversely regulated modules of antisense RNAs and cognate target messenger RNAs and specific trans-acting small RNAs, such as the posttranscriptional PHOTOSYNTHESIS REGULATORY RNA1 (PsrR1), which shows increased expression in ∆4 and is involved in repressing many photosynthesis genes at the posttranscriptional level. In conclusion, our insights extend the knowledge on the range of compensatory responses of Synechocystis sp. PCC 6803 to intracellular Ci

  8. Carbon dioxide uptake efficiency by outdoor microalgal cultures in tubular airlift photobioreactors

    SciTech Connect

    Sobczuk, T.M.; Camacho, F.G.; Rubio, F.C.; Fernandez, F.G.A.; Grima, E.M.

    2000-02-20

    The influence of solar irradiance and carbon dioxide molar fraction of injected CO{sub 2}-air mixtures on the behavior of outdoor continuous cultures of the microalga Phaeodactylum tricornutum in tubular airlift photobioreactors was analyzed. instantaneous solar irradiance, pH, dissolved oxygen, temperature, biomass concentration, and the mass flow rates of both the inlet and outlet oxygen and carbon with both the liquid and gas phases were measured. In addition, elemental analysis of the biomass and the cell-free culture medium was performed. The oxygen production rate and carbon dioxide consumption rate increased hyperbolically with the incident solar irradiance on the reactor surface. Carbon losses showed a negative correlation with the daily variation of the carbon dioxide consumption rate. The maximum CO{sub 2} uptake efficiency was 63% of the CO{sub 2} supplied when the CO{sub 2} concentration in the gas supplied was 60% v/v. Carbon losses were > 100% during the night, due to CO{sub 2} production by respiration, and hyperbolically decreased to values of 10% to 20% in the midday hours. An increase in the carbon fixed in the biomass with the solar cycle was observed. A slight daily decrease of carbon content of the cell-free culture medium indicated the existence of carbon accumulation in the culture. A decrease in CO{sub 2} molar fraction in the injected gas had a double benefit: first, the biomass productivity of the system was enhanced from 2.05 to 2.47 g L{sup {minus}1} day{sup {minus}1} by reduction of CO{sub 2} inhibition and/or pH gradients; and second, the carbon losses during the daylight period were reduced by 60%. The fluid dynamics in the reactor also influenced the carbon losses: the higher the liquid flow rate the higher the carbon losses. By using a previous mass transfer model the experimental results were simulated and the usefulness of this method in the evaluation and scale-up of tubular photobioreactors was established.

  9. Large herbivores limit CO2 uptake and suppress carbon cycle responses to warming in West Greenland

    NASA Astrophysics Data System (ADS)

    Cahoon, S. M.; Sullivan, P.; Post, E.; Welker, J. M.

    2011-12-01

    Changes in the terrestrial carbon cycle may ameliorate or exacerbate future climatic warming. Research on this topic has focused almost exclusively on abiotic drivers, whereas biotic factors, including trophic interactions, have received comparatively little attention. We quantified the singular and interactive effects of herbivore exclusion and simulated warming on ecosystem CO2 exchange over two consecutive growing seasons in West Greenland. Exclusion of caribou and muskoxen over the past eight years has led to dramatic increases in shrub cover, leaf area, ecosystem photosynthesis and a nearly three-fold increase in net C uptake. These responses were accentuated by warming, but only in the absence of herbivores. Carbon cycle responses to herbivore exclusion alone and combined with warming were driven by changes in gross ecosystem photosynthesis, as limited differences in ecosystem respiration were observed. Our results show that large herbivores can be of critical importance as mediators of arctic ecosystem responses to climate change.

  10. Multi-Model Assessment of Trends and Variability in Terrestrial Carbon Uptake in India

    NASA Astrophysics Data System (ADS)

    Rao, A. S.; Bala, G.; Ravindranath, N. H.

    2015-12-01

    Indian terrestrial ecosystem exhibits large temporal and spatial variability in carbon sources and sinks due to its monsoon based climate system, diverse land use and land cover distribution and cultural practices. In this study, a multi-model based assessment is made to study the trends and variability in the land carbon uptake for India over the 20th century. Data from nine models which are a part of a recent land surface model intercomparison project called TRENDY is used for the study. These models are driven with common forcing data over the period of 1901-2010. Model output variables assessed include: gross primary production (GPP), heterotrophic respiration (Rh), autotrophic respiration (Ra) and net primary production (NPP). The net ecosystem productivity (NEP) for the Indian region was calculated as a difference of NPP and Rh and it was found that NEP for the region indicates an estimated increase in uptake over the century by -0.6 TgC/year per year. NPP for India also shows an increasing trend of 2.03% per decade from 1901-2010. Seasonal variation in the multimodel mean NPP is maximum during the southwest monsoon period (JJA) followed by the post monsoon period (SON) and is attributed to the maximum in rainfall for the region during the months of JJA. To attribute the changes seen in the land carbon variables, influence of climatic drivers such as precipitation, temperature and remote influences of large scale phenomenon such as ENSO on the land carbon of the region are also estimated in the study. It is found that although changes in precipitation shows a good correlation to the changes seen in NEP, remote drivers like ENSO do not have much effect on them. The Net Ecosystem Exchange is calculated with the inclusion of the land use change flux and fire flux from the models. NEE suggests that the region behaves as a small sink for carbon with an net uptake of 5 GtC over the past hundred years.

  11. Carbonyl sulfide exchange in soils for better estimates of ecosystem carbon uptake

    NASA Astrophysics Data System (ADS)

    Whelan, Mary E.; Hilton, Timothy W.; Berry, Joseph A.; Berkelhammer, Max; Desai, Ankur R.; Campbell, J. Elliott

    2016-03-01

    Carbonyl sulfide (COS) measurements are one of the emerging tools to better quantify gross primary production (GPP), the largest flux in the global carbon cycle. COS is a gas with a similar structure to CO2; COS uptake is thought to be a proxy for GPP. However, soils are a potential source or sink of COS. This study presents a framework for understanding soil-COS interactions. Excluding wetlands, most of the few observations of isolated soils that have been made show small uptake of atmospheric COS. Recently, a series of studies at an agricultural site in the central United States found soil COS production under hot conditions an order of magnitude greater than fluxes at other sites. To investigate the extent of this phenomenon, soils were collected from five new sites and incubated in a variety of soil moisture and temperature states. We found that soils from a desert, an oak savannah, a deciduous forest, and a rainforest exhibited small COS fluxes, behavior resembling previous studies. However, soil from an agricultural site in Illinois, > 800 km away from the initial central US study site, demonstrated comparably large soil fluxes under similar conditions. These new data suggest that, for the most part, soil COS interaction is negligible compared to plant uptake of COS. We present a model that anticipates the large agricultural soil fluxes so that they may be taken into account. While COS air-monitoring data are consistent with the dominance of plant uptake, improved interpretation of these data should incorporate the soil flux parameterizations suggested here.

  12. Carbonyl sulfide exchange in soils for better estimates of ecosystem carbon uptake

    DOE PAGESBeta

    Whelan, Mary E.; Hilton, Timothy W.; Berry, Joseph A.; Berkelhammer, Max; Desai, Ankur R.; Campbell, J. Elliott

    2016-03-21

    Carbonyl sulfide (COS) measurements are one of the emerging tools to better quantify gross primary production (GPP), the largest flux in the global carbon cycle. COS is a gas with a similar structure to CO2; COS uptake is thought to be a proxy for GPP. However, soils are a potential source or sink of COS. This study presents a framework for understanding soil–COS interactions. Excluding wetlands, most of the few observations of isolated soils that have been made show small uptake of atmospheric COS. Recently, a series of studies at an agricultural site in the central United States found soilmore » COS production under hot conditions an order of magnitude greater than fluxes at other sites. To investigate the extent of this phenomenon, soils were collected from five new sites and incubated in a variety of soil moisture and temperature states. We found that soils from a desert, an oak savannah, a deciduous forest, and a rainforest exhibited small COS fluxes, behavior resembling previous studies. However, soil from an agricultural site in Illinois, >800 km away from the initial central US study site, demonstrated comparably large soil fluxes under similar conditions. These new data suggest that, for the most part, soil COS interaction is negligible compared to plant uptake of COS. We present a model that anticipates the large agricultural soil fluxes so that they may be taken into account. Furthermore, while COS air-monitoring data are consistent with the dominance of plant uptake, improved interpretation of these data should incorporate the soil flux parameterizations suggested here.« less

  13. Carbon Uptake and the Metabolism and Transport of Lipids in an Arbuscular Mycorrhiza1

    PubMed Central

    Pfeffer, Philip E.; Douds, David D.; Bécard, Guillaume; Shachar-Hill, Yair

    1999-01-01

    Both the plant and the fungus benefit nutritionally in the arbuscular mycorrhizal symbiosis: The host plant enjoys enhanced mineral uptake and the fungus receives fixed carbon. In this exchange the uptake, metabolism, and translocation of carbon by the fungal partner are poorly understood. We therefore analyzed the fate of isotopically labeled substrates in an arbuscular mycorrhiza (in vitro cultures of Ri T-DNA-transformed carrot [Daucus carota] roots colonized by Glomus intraradices) using nuclear magnetic resonance spectroscopy. Labeling patterns observed in lipids and carbohydrates after substrates were supplied to the mycorrhizal roots or the extraradical mycelium indicated that: (a) 13C-labeled glucose and fructose (but not mannitol or succinate) are effectively taken up by the fungus within the root and are metabolized to yield labeled carbohydrates and lipids; (b) the extraradical mycelium does not use exogenous sugars for catabolism, storage, or transfer to the host; (c) the fungus converts sugars taken up in the root compartment into lipids that are then translocated to the extraradical mycelium (there being little or no lipid synthesis in the external mycelium); and (d) hexose in fungal tissue undergoes substantially higher fluxes through an oxidative pentose phosphate pathway than does hexose in the host plant. PMID:10364411

  14. Selective uptake of single-walled carbon nanotubes by circulating monocytes for enhanced tumour delivery.

    PubMed

    Smith, Bryan Ronain; Ghosn, Eliver Eid Bou; Rallapalli, Harikrishna; Prescher, Jennifer A; Larson, Timothy; Herzenberg, Leonore A; Gambhir, Sanjiv Sam

    2014-06-01

    In cancer imaging, nanoparticle biodistribution is typically visualized in living subjects using 'bulk' imaging modalities such as magnetic resonance imaging, computerized tomography and whole-body fluorescence. Accordingly, nanoparticle influx is observed only macroscopically, and the mechanisms by which they target cancer remain elusive. Nanoparticles are assumed to accumulate via several targeting mechanisms, particularly extravasation (leakage into tumour). Here, we show that, in addition to conventional nanoparticle-uptake mechanisms, single-walled carbon nanotubes are almost exclusively taken up by a single immune cell subset, Ly-6C(hi) monocytes (almost 100% uptake in Ly-6C(hi) monocytes, below 3% in all other circulating cells), and delivered to the tumour in mice. We also demonstrate that a targeting ligand (RGD) conjugated to nanotubes significantly enhances the number of single-walled carbon nanotube-loaded monocytes reaching the tumour (P < 0.001, day 7 post-injection). The remarkable selectivity of this tumour-targeting mechanism demonstrates an advanced immune-based delivery strategy for enhancing specific tumour delivery with substantial penetration.

  15. Selective uptake of single-walled carbon nanotubes by circulating monocytes for enhanced tumour delivery

    NASA Astrophysics Data System (ADS)

    Smith, Bryan Ronain; Ghosn, Eliver Eid Bou; Rallapalli, Harikrishna; Prescher, Jennifer A.; Larson, Timothy; Herzenberg, Leonore A.; Gambhir, Sanjiv Sam

    2014-06-01

    In cancer imaging, nanoparticle biodistribution is typically visualized in living subjects using `bulk' imaging modalities such as magnetic resonance imaging, computerized tomography and whole-body fluorescence. Accordingly, nanoparticle influx is observed only macroscopically, and the mechanisms by which they target cancer remain elusive. Nanoparticles are assumed to accumulate via several targeting mechanisms, particularly extravasation (leakage into tumour). Here, we show that, in addition to conventional nanoparticle-uptake mechanisms, single-walled carbon nanotubes are almost exclusively taken up by a single immune cell subset, Ly-6Chi monocytes (almost 100% uptake in Ly-6Chi monocytes, below 3% in all other circulating cells), and delivered to the tumour in mice. We also demonstrate that a targeting ligand (RGD) conjugated to nanotubes significantly enhances the number of single-walled carbon nanotube-loaded monocytes reaching the tumour (P < 0.001, day 7 post-injection). The remarkable selectivity of this tumour-targeting mechanism demonstrates an advanced immune-based delivery strategy for enhancing specific tumour delivery with substantial penetration.

  16. Enhanced alkalinity and dissolved inorganic carbon release in intertidal sands from the Oosterschelde (The Netherlands) induced by a natural macrofaunal community

    NASA Astrophysics Data System (ADS)

    Brenner, Heiko; Montserrat, Francesc; Meysman, Filip

    2014-05-01

    The influence of bioturbation and bioirrigation in intertidal sandflat sediments from the Oosterschelde (The Netherlands) on the rates and sources of benthic alkalinity (TA) and dissolved inorganic carbon (DIC) generation was examined using measurements of sediment-water fluxes of bromide, oxygen, nutrients, TA and DIC. Sediments from the Oosterschelde typically contain the deep-burrowing polychaete Arenicola marina, the sub-surface bioturbator Macoma balthica and the surface bioturbator Cerastoderma edule. Measurements were carried out in six tanks (106 cm x 87 cm x 20 cm). The sediment was collected in November 2012. Measurements were started in June 2013. Each tank was sampled twice for benthic fluxes over the course of one month. Prior measurements three tanks were defaunated by covering the sediment surface with a black plastic sheet. Benthic flux measurements were carried out in closed plastic chambers (diameter 66 cm). These chambers typically contained about 10 cm sediment and 20 cm overlying water. The tank was completely covered with opaque a black plastic sheet during measurements. The incubation time ranged from 6 to 8 hours. Here we present preliminary results from both experimental runs. High benthic fluxes of TA (10 - 70 mmol m-2 d-1) and DIC (35 - 150 mmol m-2 d-1) were observed in all tanks. Whereas benthic TA and DIC fluxes were significantly higher in faunated tanks, total oxygen uptake (TOU: 30 - 75 mmol m-2 d-1) did not show any meaningful trend between the two treatments. Therefore, the apparent community respiratory quotient (CRQ = DIC/TOU) varied between 0.9 and 3.3, with significant higher values in faunated tanks, suggesting enhanced flushing of DIC produced in deeper layers and released by bioirrigation. This DIC was either produced by anaerobic respiration or carbonate dissolution. To unravel the contribution of carbonate dissolution and anaerobic respiration on the observed TA and DIC fluxes, we further present estimations for relevant

  17. Observations of the uptake of carbonyl sulfide (COS) by trees under elevated atmospheric carbon dioxide concentrations

    NASA Astrophysics Data System (ADS)

    Sandoval-Soto, L.; Kesselmeier, M.; Schmitt, V.; Wild, A.; Kesselmeier, J.

    2012-08-01

    Global change forces ecosystems to adapt to elevated atmospheric concentrations of carbon dioxide (CO2). We understand that carbonyl sulfide (COS), a trace gas which is involved in building up the stratospheric sulfate aerosol layer, is taken up by vegetation with the same triad of the enzymes which are metabolizing CO2, i.e. ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), phosphoenolpyruvate carboxylase (PEP-Co) and carbonic anhydrase (CA). Therefore, we discuss a physiological/biochemical acclimation of these enzymes affecting the sink strength of vegetation for COS. We investigated the acclimation of two European tree species, Fagus sylvatica and Quercus ilex, grown inside chambers under elevated CO2, and determined the exchange characteristics and the content of CA after a 1-2 yr period of acclimation from 350 ppm to 800 ppm CO2. We demonstrate that a compensation point, by definition, does not exist. Instead, we propose to discuss a point of uptake affinity (PUA). The results indicate that such a PUA, the CA activity and the deposition velocities may change and may cause a decrease of the COS uptake by plant ecosystems, at least as long as the enzyme acclimation to CO2 is not surpassed by an increase of atmospheric COS. As a consequence, the atmospheric COS level may rise causing an increase of the radiative forcing in the troposphere. However, this increase is counterbalanced by the stronger input of this trace gas into the stratosphere causing a stronger energy reflection by the stratospheric sulfur aerosol into space (Brühl et al., 2012). These data are very preliminary but may trigger a discussion on COS uptake acclimation to foster measurements with modern analytical instruments.

  18. The structure of the digitalislike and natriuretic factors identified as macrocyclic derivatives of the inorganic carbon suboxide.

    PubMed

    Kerek, F

    2000-09-01

    The Natriuretic and Endogenous DigitalisLike Factors (EDLFs) are disclosed to be cyclomeric and macroring closed derivatives of the inorganic carbon suboxide. The macrocyclic cyclohexamer with six carbon suboxide units has a molar mass of 408.2 Da, as previously been found for the EDLF of animal origin. The anhydrous cyclohexameric factor is lipophilic but is transformed into more hydrophilic derivatives by the stepwise addition of water. Based on the present findings, it appears that EDLFs exist in solution as an equilibrium mixture of lipophilic and hydrophilic forms and not as a single chemical substance. This structural assumption better accounts for the earlier observed highly anomalous properties of EDLFs. The simultaneously found higher molar mass (4,100 and 4,900 Da) macrocyclic carbon suboxide derivatives are tentatively identified as the Natriuretic factors. PMID:11016817

  19. Sediment Dynamics and Fate of Heavy Metals, Carbon, and Inorganic Matter in the Hudson Estuary, New York

    NASA Astrophysics Data System (ADS)

    Sritrairat, S.; Kenna, T. C.; Peteet, D. M.; Nguyen, K.; Perez, M.; Huang, Z.; Miller, A.

    2010-12-01

    The Hudson River Estuary is typical of a large, intensively used and modified estuary. Its watershed is an important resource for small communities along the river as well as large population centers such as the Metropolitan area of New York City. In addition to past industrial activities within the region that have resulted in many instances of environmental contamination, the estuary is at high risk for climatic and other anthropogenic changes. This study focuses on sediment dynamics and the fate of heavy metals, inorganic matter, and carbon in 27 sediment cores and 15 surface samples taken from wetlands and tributaries of the Hudson Estuary along a north-south transect from Troy, NY to New York harbor. Each site experiences different salinity, vegetation, landscape, and flow pattern. 1) We quantified and mapped the distribution of toxic heavy metals, including Pb, Cu, and Zn, in the estuary to examine the fate of these contaminants. Jamaica Bay and the East River sediments from New York City are the most contaminated with heavy metals among the sites analyzed. 2) We examined the sedimentation rate and sedimentation pattern, using pollution chronology along with radiometric methods. Sedimentation rates at 17 sites range from 0.26 - 2.63 cm/yr during the last century. Cores taken from high-energy or non-vegetated area are more likely to have a disturbed sedimentation pattern, and thus there is a higher risk of contaminant resuspension at those locations. 3) We quantified Ti and K concentration as a measure of the fluctuation of inorganic matter input and the fate of inorganic matter in the estuary. We quantified organic matter content with the Loss-on-Ignition (LOI) method at selected sites to identify carbon sequestration rate in the estuary. Inorganic matter content during the last century at most sites is significantly higher than that found prior to the European Settlements at the same location, suggesting increasing erosion and disturbances. However, more

  20. [Hydrochemistry and Dissolved Inorganic Carbon Stable Isotope of Shibing Dolomite Karst Area in Guizhou Province].

    PubMed

    Xiao, Shi-zhen; Lan, Jia-cheng; Yuan, Dao-xian; Wang, Yun; Yang, Long; Ao, Xiang-hong

    2015-06-01

    Totally 49 water samples were collected in Shibing Dolomite Karst World Natural Heritage Site in Guizhou Province to analyze the characteristics and controlling factors of both the surface and underground waters, as well as the features and their origins of the dissolved inorganic carbon isotope. It was found that the pH of the study area was neutral to alkaline with low concentrations of total dissolved solids. The cations were dominated by Ca2+, Mg2 and anions by HCO3-, featured by HCO3-Ca x Mg type water. The ratios of Cl-, NO3- and SO4(2-) in the allogenic water from the shale area in the northern catchment were higher than those in autogenic water from the dolomite karst area, so did the concentration of Si. The SIc and SId of the allogenic waters in the shale area were negative. After the waters entered into and flew by the dolomite karst area, both the SIc and SId increased to over 0. It could be told by the water chemistry that the hydrochemistry was little impacted by the rainfall and human activities. The Gibbs plot revealed that the chemical composition of the waters was mainly controlled by rock weathering. The δ(13)C(DIC) of the surface waters ranged from -8.27% to -11.55% per hundred, averaging -9.45% per hundredo, while that of the underground waters ranged from -10.57% per hundred to -15.59% per hundred, averaging -12.04% per hundred, which was lighter than that of surface water. For the distribution features, it was found the δ(13)C(DIC), of the upper reaches of branches of Shangmuhe River was lighter than that of the lower reach, while that of the main river Shangmuhe River was relatively complex. Based on the mass balance of stable isotopes and the δ(13)C(DIC), the ratio of the origin of DIC of the ground water was calculated. It was found that 51.2% was from soil CO2, and 48.8% was from the rock itself. PMID:26387311

  1. [Hydrochemistry and Dissolved Inorganic Carbon Stable Isotope of Shibing Dolomite Karst Area in Guizhou Province].

    PubMed

    Xiao, Shi-zhen; Lan, Jia-cheng; Yuan, Dao-xian; Wang, Yun; Yang, Long; Ao, Xiang-hong

    2015-06-01

    Totally 49 water samples were collected in Shibing Dolomite Karst World Natural Heritage Site in Guizhou Province to analyze the characteristics and controlling factors of both the surface and underground waters, as well as the features and their origins of the dissolved inorganic carbon isotope. It was found that the pH of the study area was neutral to alkaline with low concentrations of total dissolved solids. The cations were dominated by Ca2+, Mg2 and anions by HCO3-, featured by HCO3-Ca x Mg type water. The ratios of Cl-, NO3- and SO4(2-) in the allogenic water from the shale area in the northern catchment were higher than those in autogenic water from the dolomite karst area, so did the concentration of Si. The SIc and SId of the allogenic waters in the shale area were negative. After the waters entered into and flew by the dolomite karst area, both the SIc and SId increased to over 0. It could be told by the water chemistry that the hydrochemistry was little impacted by the rainfall and human activities. The Gibbs plot revealed that the chemical composition of the waters was mainly controlled by rock weathering. The δ(13)C(DIC) of the surface waters ranged from -8.27% to -11.55% per hundred, averaging -9.45% per hundredo, while that of the underground waters ranged from -10.57% per hundred to -15.59% per hundred, averaging -12.04% per hundred, which was lighter than that of surface water. For the distribution features, it was found the δ(13)C(DIC), of the upper reaches of branches of Shangmuhe River was lighter than that of the lower reach, while that of the main river Shangmuhe River was relatively complex. Based on the mass balance of stable isotopes and the δ(13)C(DIC), the ratio of the origin of DIC of the ground water was calculated. It was found that 51.2% was from soil CO2, and 48.8% was from the rock itself.

  2. A New Fast, Reliable Technique for the Sampling of Dissolved Inorganic Carbon in Sea Ice

    NASA Astrophysics Data System (ADS)

    Hu, Y.; Wang, F.; Rysgaard, S.; Barber, D. G.

    2015-12-01

    For a long time, sea ice was considered to act as a lid over seawater preventing CO2 exchange between the atmosphere and ocean. Recent observations suggest that sea ice can be an active source or a sink for CO2, although its magnitude is not very clear. The direct measurements on CO2 flux based on the chamber method and eddy covariance often do not agree with each other. It is therefore important to measure the dissolved inorganic carbon (DIC) stock in sea ice precisely in order to better understand the CO2 flux through sea ice. The challenges in sea ice DIC sampling is how to melt the ice core without being exposed to the air gaining or losing CO2. A common practice is to seal the ice core in a self-prepared gas-tight plastic bag and suck the air out of the bag gently using a syringe (together with a needle) through a valve mounted on one side of the bag. However, this method is time consuming (takes up to several minutes to suck the air out) and very often there is large headspace found in the bag after the ice melts due to the imperfect bag-preparation, which might affect the DIC concentration in melt ice-water. We developed a new technique by using a commercially available plastic bag with a vacuum sealer to seal the ice core. In comparison to syringe-based method, this technique is fast and easy to operate; it takes less than 10 seconds to vacuum and seal the bag all in one button with no headspace left in the bag. Experimental tests with replicate ice cores sealed by those two methods showed that there is no difference in the DIC concentration measured after these two methods, suggesting that there is no loss of DIC during the course of vacuum sealing. In addition, a time series experiment on DIC in melt ice-water stored in the new bag shows that when the samples were not poisoned, the DIC concentration remains unchanged for at least 3 days in the bag; while poisoned by HgCl2, there is no change in DIC for at least 21 days, indicating that this new bag is

  3. Spatial variation of salt-marsh organic and inorganic deposition and organic carbon accumulation: Inferences from the Venice lagoon, Italy

    NASA Astrophysics Data System (ADS)

    Roner, M.; D'Alpaos, A.; Ghinassi, M.; Marani, M.; Silvestri, S.; Franceschinis, E.; Realdon, N.

    2016-07-01

    inorganic soil content near the edge is due to the preferential deposition of inorganic sediment from the adjacent creek, and to the rapid decomposition of the relatively large biomass production. The higher organic matter content in the inner part of the marsh results from the small amounts of suspended sediment that makes it to the inner marsh, and to the low decomposition rate which more than compensates for the lower biomass productivity in the low-lying inner zones. Finally, the average soil organic carbon density from the LOI measurements is estimated to be 0.044 g C cm-3. The corresponding average carbon accumulation rate for the San Felice and Rigà salt marshes, 132 g C m-2 yr-1, highlights the considerable carbon stock and sequestration rate associated with coastal salt marshes.

  4. Facile Carbonization of Microporous Organic Polymers into Hierarchically Porous Carbons Targeted for Effective CO2 Uptake at Low Pressures.

    PubMed

    Gu, Shuai; He, Jianqiao; Zhu, Yunlong; Wang, Zhiqiang; Chen, Dongyang; Yu, Guipeng; Pan, Chunyue; Guan, Jianguo; Tao, Kai

    2016-07-20

    The advent of microporous organic polymers (MOPs) has delivered great potential in gas storage and separation (CCS). However, the presence of only micropores in these polymers often imposes diffusion limitations, which has resulted in the low utilization of MOPs in CCS. Herein, facile chemical activation of the single microporous organic polymers (MOPs) resulted in a series of hierarchically porous carbons with hierarchically meso-microporous structures and high CO2 uptake capacities at low pressures. The MOPs precursors (termed as MOP-7-10) with a simple narrow micropore structure obtained in this work possess moderate apparent BET surface areas ranging from 479 to 819 m(2) g(-1). By comparing different activating agents for the carbonization of these MOPs matrials, we found the optimized carbon matrials MOPs-C activated by KOH show unique hierarchically porous structures with a significant expansion of dominant pore size from micropores to mesopores, whereas their microporosity is also significantly improved, which was evidenced by a significant increase in the micropore volume (from 0.27 to 0.68 cm(3) g(-1)). This maybe related to the collapse and the structural rearrangement of the polymer farmeworks resulted from the activation of the activating agent KOH at high temperature. The as-made hierarchically porous carbons MOPs-C show an obvious increase in the BET surface area (from 819 to 1824 m(2) g(-1)). And the unique hierarchically porous structures of MOPs-C significantly contributed to the enhancement of the CO2 capture capacities, which are up to 214 mg g(-1) (at 273 K and 1 bar) and 52 mg g(-1) (at 273 K and 0.15 bar), superior to those of the most known MOPs and porous carbons. The high physicochemical stabilities and appropriate isosteric adsorption heats as well as high CO2/N2 ideal selectivities endow these hierarchically porous carbon materials great potential in gas sorption and separation. PMID:27332739

  5. Facile Carbonization of Microporous Organic Polymers into Hierarchically Porous Carbons Targeted for Effective CO2 Uptake at Low Pressures.

    PubMed

    Gu, Shuai; He, Jianqiao; Zhu, Yunlong; Wang, Zhiqiang; Chen, Dongyang; Yu, Guipeng; Pan, Chunyue; Guan, Jianguo; Tao, Kai

    2016-07-20

    The advent of microporous organic polymers (MOPs) has delivered great potential in gas storage and separation (CCS). However, the presence of only micropores in these polymers often imposes diffusion limitations, which has resulted in the low utilization of MOPs in CCS. Herein, facile chemical activation of the single microporous organic polymers (MOPs) resulted in a series of hierarchically porous carbons with hierarchically meso-microporous structures and high CO2 uptake capacities at low pressures. The MOPs precursors (termed as MOP-7-10) with a simple narrow micropore structure obtained in this work possess moderate apparent BET surface areas ranging from 479 to 819 m(2) g(-1). By comparing different activating agents for the carbonization of these MOPs matrials, we found the optimized carbon matrials MOPs-C activated by KOH show unique hierarchically porous structures with a significant expansion of dominant pore size from micropores to mesopores, whereas their microporosity is also significantly improved, which was evidenced by a significant increase in the micropore volume (from 0.27 to 0.68 cm(3) g(-1)). This maybe related to the collapse and the structural rearrangement of the polymer farmeworks resulted from the activation of the activating agent KOH at high temperature. The as-made hierarchically porous carbons MOPs-C show an obvious increase in the BET surface area (from 819 to 1824 m(2) g(-1)). And the unique hierarchically porous structures of MOPs-C significantly contributed to the enhancement of the CO2 capture capacities, which are up to 214 mg g(-1) (at 273 K and 1 bar) and 52 mg g(-1) (at 273 K and 0.15 bar), superior to those of the most known MOPs and porous carbons. The high physicochemical stabilities and appropriate isosteric adsorption heats as well as high CO2/N2 ideal selectivities endow these hierarchically porous carbon materials great potential in gas sorption and separation.

  6. Impacts of carbon source addition on denitrification and phosphorus uptake in enhanced biological phosphorus removal systems.

    PubMed

    Begum, Shamim A; Batista, Jacimaria R

    2013-01-01

    In this study, simultaneous denitrification and phosphorus (P) removal were investigated in batch tests using nitrified mixed liquor and secondary wastewater influent from a full-scale treatment plant and different levels of acetate and propionate as supplemental carbon sources. Without supplemental carbon source, denitrification occurred at low rate and P release and P uptake was negatively affected (i.e., P removal of only 59.7%). When acetate and propionate were supplied, denitrification and P release occurred simultaneously under anoxic conditions. For acetate and propionate at a C/N stoichiometric ratio of 7.6, P release was negatively affected by denitrification. For acetate, the percent P removal and denitrification were very similar for C/N ratios of 22 (5X stoichiometric) and 59 (10X stoichiometric). For propionate, both percent P removal and denitrification deteriorated for C/N ratios of 22 (5X stoichiometric) and 45 (10X stoichiometric). It was observed that carbon source added in excess to stoichiometric ratio was consumed in the aerobic zone, but P was not taken up. This implies that PAO bacteria may utilize the excess carbon source in the aerobic zone rather than their polyhydroxyalkanoate (PHA) reserves, thereby promoting deterioration of the system.

  7. Competition for inorganic carbon between oxygenic and anoxygenic phototrophs in a hypersaline microbial mat, Guerrero Negro, Mexico.

    PubMed

    Finke, Niko; Hoehler, Tori M; Polerecky, Lubos; Buehring, Benjamin; Thamdrup, Bo

    2013-05-01

    While most oxygenic phototrophs harvest light only in the visible range (400-700 nm, VIS), anoxygenic phototrophs can harvest near infrared light (> 700 nm, NIR). To study interactions between the photosynthetic guilds we used microsensors to measure oxygen and gross oxygenic photosynthesis (gOP) in a hypersaline microbial mat under full (VIS + NIR) and VIS illumination. Under normal dissolved inorganic carbon (DIC) concentrations (2 mM), volumetric rates of gOP were reduced up to 65% and areal rates by 16-31% at full compared with VIS illumination. This effect was enhanced (reduction up to 100% in volumetric, 50% in areal rates of gOP) when DIC was lowered to 1 mM, but diminished at 10 mM DIC or lowered pH. In conclusion, under full-light illumination anoxygenic phototrophs are able to reduce the activity of oxygenic phototrophs by efficiently competing for inorganic carbon within the highly oxygenated layer. Anoxygenic photosynthesis, calculated from the difference in gOP under full and VIS illumination, represented between 10% and 40% of the C-fixation. The DIC depletion in the euphotic zone as well as the significant C-fixation by anoxygenic phototrophs in the oxic layer influences the carbon isotopic composition of the mat, which needs to be taken into account when interpreting isotopic biosignals in geological records.

  8. Influence of dissolved inorganic carbon and calcium on gas formation and accumulation in iron permeable reactive barriers.

    PubMed

    Ruhl, Aki S; Weber, Anne; Jekel, Martin

    2012-11-01

    Uncertainties in long-term reactivity and gas accumulation in Fe(0) permeable reactive barriers still hinder a broad application of this groundwater remediation technology. In this study long-term column experiments were conducted under varying geochemical conditions. Generation of hydrogen by anaerobic corrosion in Fe(0) reactive filters was mainly influenced by the mass flux of dissolved inorganic carbon. Both increased concentrations and volume flows led to a substantial rise in gas generation but only to slight differences of gas accumulation within the pores of the reactive filter. Comparisons of columns with different lengths showed higher averaged corrosion rates in the shorter and lower corrosion rates in the longer columns. Calcium in conjunction with dissolved inorganic carbon formed compact and localized aragonite minerals, while in the absence of calcium chukanovite dominated, which covered and passivated the reactive surface to a higher extent. Magnetite was the major crystalline corrosion product in the absence of carbonate and no decline in long term corrosion rates was observed within up to 700 days of operation. Total gas yields of columns were restricted by passivation and approached a volume of approximately 13.5 mL/g granulated cast iron.

  9. Water Uptake and Carbon Assimilation in Maize at Elevated and ambient CO2: Modeling and Measurement.

    NASA Astrophysics Data System (ADS)

    Timlin, Dennis; Chun, Jong-Ahn; Kim, Soo-Hyung; Yang, Yang; Fleisher, David; Reddy, Vangimalla

    2013-04-01

    Potential transpiration in crops is dependent on both plant and environmental properties. Carbon dioxide content of the atmosphere is linked to potential transpiration because CO2 diffuses onto water saturated surfaces within plant stomata. At high CO2 concentrations, CO2 diffuses rapidly into stomata and therefore stomata do not have to remain open to the atmosphere for long periods of time. This results in lower transpiration rates per unit CO2 assimilated at elevated CO2 concentrations. The objective of this study was to measure CO2 assimilation and water uptake by maize under different irrigation regimes and two CO2 concentrations. The data were then used to evaluate the ability of the maize model MaizSim to simulate the effects of water stress and CO2 on water use and photosynthesis. MaizSim uses a Farquhar type photosynthesis model coupled a Ball-Berry stomatal control model. Non-linear beta functions are used to estimate the effects of temperature on growth and development processes. The experimental data come from experiments in outdoor, sunlit growth chambers at the USDA-ARS Beltsville Agricultural Research Center. The eight treatments comprised two levels of carbon dioxide concentrations (400 and 800 ppm) and four levels of water stress (well-watered control, mild, moderate, and severe). The water stress treatments were applied at both CO2 levels. Water contents were monitored hourly by a Time Domain Reflectometry (TDR) system. The model simulated higher water contents at the same time after applying water stress at the high CO2 treatment than for the low CO2 treatment as was found in the measured data. Measurement of water uptake by roots and carbon assimilation rates in the chambers will be addressed.

  10. Audit of the global carbon budget: estimate errors and their impact on uptake uncertainty

    DOE PAGESBeta

    Ballantyne, A. P.; Andres, R.; Houghton, R.; Stocker, B. D.; Wanninkhof, R.; Anderegg, W.; Cooper, L. A.; DeGrandpre, M.; Tans, P. P.; Miller, J. B.; et al

    2015-04-30

    Over the last 5 decades monitoring systems have been developed to detect changes in the accumulation of carbon (C) in the atmosphere and ocean; however, our ability to detect changes in the behavior of the global C cycle is still hindered by measurement and estimate errors. Here we present a rigorous and flexible framework for assessing the temporal and spatial components of estimate errors and their impact on uncertainty in net C uptake by the biosphere. We present a novel approach for incorporating temporally correlated random error into the error structure of emission estimates. Based on this approach, we concludemore » that the 2σ uncertainties of the atmospheric growth rate have decreased from 1.2 Pg C yr₋1 in the 1960s to 0.3 Pg C yr₋1 in the 2000s due to an expansion of the atmospheric observation network. The 2σ uncertainties in fossil fuel emissions have increased from 0.3 Pg C yr₋1 in the 1960s to almost 1.0 Pg C yr₋1 during the 2000s due to differences in national reporting errors and differences in energy inventories. Lastly, while land use emissions have remained fairly constant, their errors still remain high and thus their global C uptake uncertainty is not trivial. Currently, the absolute errors in fossil fuel emissions rival the total emissions from land use, highlighting the extent to which fossil fuels dominate the global C budget. Because errors in the atmospheric growth rate have decreased faster than errors in total emissions have increased, a ~20% reduction in the overall uncertainty of net C global uptake has occurred. Given all the major sources of error in the global C budget that we could identify, we are 93% confident that terrestrial C uptake has increased and 97% confident that ocean C uptake has increased over the last 5 decades. Thus, it is clear that arguably one of the most vital ecosystem services currently provided by the biosphere is the continued removal of approximately half of atmospheric CO2 emissions from the

  11. Audit of the global carbon budget: estimate errors and their impact on uptake uncertainty

    SciTech Connect

    Ballantyne, A. P.; Andres, R.; Houghton, R.; Stocker, B. D.; Wanninkhof, R.; Anderegg, W.; Cooper, L. A.; DeGrandpre, M.; Tans, P. P.; Miller, J. B.; Alden, C.; White, J. W. C.

    2015-04-30

    Over the last 5 decades monitoring systems have been developed to detect changes in the accumulation of carbon (C) in the atmosphere and ocean; however, our ability to detect changes in the behavior of the global C cycle is still hindered by measurement and estimate errors. Here we present a rigorous and flexible framework for assessing the temporal and spatial components of estimate errors and their impact on uncertainty in net C uptake by the biosphere. We present a novel approach for incorporating temporally correlated random error into the error structure of emission estimates. Based on this approach, we conclude that the 2σ uncertainties of the atmospheric growth rate have decreased from 1.2 Pg C yr₋1 in the 1960s to 0.3 Pg C yr₋1 in the 2000s due to an expansion of the atmospheric observation network. The 2σ uncertainties in fossil fuel emissions have increased from 0.3 Pg C yr₋1 in the 1960s to almost 1.0 Pg C yr₋1 during the 2000s due to differences in national reporting errors and differences in energy inventories. Lastly, while land use emissions have remained fairly constant, their errors still remain high and thus their global C uptake uncertainty is not trivial. Currently, the absolute errors in fossil fuel emissions rival the total emissions from land use, highlighting the extent to which fossil fuels dominate the global C budget. Because errors in the atmospheric growth rate have decreased faster than errors in total emissions have increased, a ~20% reduction in the overall uncertainty of net C global uptake has occurred. Given all the major sources of error in the global C budget that we could identify, we are 93% confident that terrestrial C uptake has increased and 97% confident that ocean C uptake has increased over the last 5 decades. Thus, it is clear that arguably one of the most vital ecosystem services currently provided by the biosphere is the continued removal of approximately half

  12. Audit of the global carbon budget: estimate errors and their impact on uptake uncertainty

    NASA Astrophysics Data System (ADS)

    Ballantyne, A. P.; Andres, R.; Houghton, R.; Stocker, B. D.; Wanninkhof, R.; Anderegg, W.; Cooper, L. A.; DeGrandpre, M.; Tans, P. P.; Miller, J. B.; Alden, C.; White, J. W. C.

    2015-04-01

    Over the last 5 decades monitoring systems have been developed to detect changes in the accumulation of carbon (C) in the atmosphere and ocean; however, our ability to detect changes in the behavior of the global C cycle is still hindered by measurement and estimate errors. Here we present a rigorous and flexible framework for assessing the temporal and spatial components of estimate errors and their impact on uncertainty in net C uptake by the biosphere. We present a novel approach for incorporating temporally correlated random error into the error structure of emission estimates. Based on this approach, we conclude that the 2σ uncertainties of the atmospheric growth rate have decreased from 1.2 Pg C yr-1 in the 1960s to 0.3 Pg C yr-1 in the 2000s due to an expansion of the atmospheric observation network. The 2σ uncertainties in fossil fuel emissions have increased from 0.3 Pg C yr-1 in the 1960s to almost 1.0 Pg C yr-1 during the 2000s due to differences in national reporting errors and differences in energy inventories. Lastly, while land use emissions have remained fairly constant, their errors still remain high and thus their global C uptake uncertainty is not trivial. Currently, the absolute errors in fossil fuel emissions rival the total emissions from land use, highlighting the extent to which fossil fuels dominate the global C budget. Because errors in the atmospheric growth rate have decreased faster than errors in total emissions have increased, a ~20% reduction in the overall uncertainty of net C global uptake has occurred. Given all the major sources of error in the global C budget that we could identify, we are 93% confident that terrestrial C uptake has increased and 97% confident that ocean C uptake has increased over the last 5 decades. Thus, it is clear that arguably one of the most vital ecosystem services currently provided by the biosphere is the continued removal of approximately half of atmospheric CO2 emissions from the atmosphere

  13. Characteristics of High Time-Resolved Concentrations of Particulate Inorganic Ions and Black Carbon Downwind of Seoul, Korea

    NASA Astrophysics Data System (ADS)

    Lee, Y.; Choi, Y.; Kim, C.; Ghim, Y.

    2012-12-01

    Concentrations of inorganic ions and black carbon (BC) in PM2.5 were continuously measured using PILS (particle-into-liquid sampler, ADI 2081, Applikon) and MAAP (Multiangle Absorption Photometer, Model 5012, Thermo), respectively, for three and half months from mid-February to May, at intervals of 20-30 minutes. The measurements were made at the Global Campus of Hankuk University of Foreign Studies, about 35 km southeast of downtown Seoul, the general area of which is affected by prevailing northwesterlies. The site is considered to be an ideal place for exploring transport of air pollutants and formation of secondary ions by photochemical reactions since there are no major emission sources nearby except a 4-lane road running about 1.4 km to the west. Analyses were made by two stages. In the first stage, typical types of diurnal variations in inorganic ions and BC concentrations were identified using cluster analysis. Diurnal variations in concentrations of each cluster were compared with the mean diurnal variations during the measurement period. Factors causing the differences in diurnal variations were discussed by cluster and by species. In the second stage, high and low concentration episodes were determined based on three-day moving averages of the sum of concentrations of particulate inorganic ions and BC. Mean concentrations and compositions in each episode were compared with those during the measurement period.

  14. Soil Inorganic Carbon Thresholds and Formation: What are the Controls in a Transitional, Semi-Arid Watershed?

    NASA Astrophysics Data System (ADS)

    Stanbery, C.; Will, R. M.; Benner, S. G.; Seyfried, M. S.; Lohse, K. A.; Lytle, M. L.; Weppner, K.; Flores, A. N.; Smith, A.; Good, A.; Thornton, C.; Lewis, H.; Bruck, B.; Huq, O.; Wallace, S.; Cook, M.; Black, C.; Pierce, J. L.

    2015-12-01

    Inorganic Soil Carbon (SIC) constitutes approximately 40% of terrestrial soil carbon and it is an integral part of the global carbon cycle. The precipitation and storage of inorganic carbon within soils is controlled by the soil forming factors (Jenny, 1941) where the amount of rainfall is the strongest control on SIC presence or absence. However, within areas dry enough to allow inorganic carbon formation, the hierarchy of controls on SIC amount is complex. Measuring and modeling SIC accumulation at the pedon and watershed scale will improve our understanding of SIC storage. The Reynolds Creek watershed in southwestern Idaho is an ideal location for the study as it transitions from SIC dominated in low elevations to organic carbon dominated at high elevations, and includes a range of parent materials and vegetation types. Initial results show that SIC is unlikely to form at sites with >450mm of precipitation, and variability in SIC concentration at the pedon scale is significant. The study locations had vegetation types that included a variety of sagebrush species (Artimesia spp), bitterbrush (Purshia tridentata) greasewood (Sarcobatus vermiculatus) and juniper (Juniperus occidentalis). Samples were collected from soils formed on granite, basalt, other volcanics, and alluvium. SIC measurements were made using a modified pressure calcimeter, measuring CO2 released from the reaction of acid with the sample. The highest SIC concentrations range from 15 to 27kg/m2 and are found in basaltic and terrace soils with loess accumulation, in elevations ranging from 1148-1943m and rainfall ranging from 250-716mm. Soils examined from a chronosequence of four terraces in the lower watershed (282-296mm of rainfall), and generally increasing amounts of loess accumulation with time, suggest strong accumulation of SIC on older loessal surfaces. Measurements from both fine-grained and gravelly soils suggests that approximately 15% of SIC in gravelly sites may be accumulated as

  15. Preliminary Results from High Time-Resolution Measurements of Particulate Inorganic Ions and Black Carbon Downwind of Seoul, Korea

    NASA Astrophysics Data System (ADS)

    Ghim, Y.; Lee, Y.; Kim, C.; Choi, Y.; Lee, T.

    2011-12-01

    Concentrations of inorganic ions and black carbon (BC) in PM2.5 were measured using PILS (particle-into-liquid sampler, ADI 2081, Applikon) and MAAP (Multiangle Absorption Photometer, Model 5012, Thermo), respectively, at intervals of 20-30 minutes. The measurements were made at the Yongin campus of Hankuk University of Foreign Studies, about 35 km southeast of downtown Seoul, which is affected by prevailing northwesterlies. The site is considered as an ideal place for exploring transport of air pollutants and variations of secondary ion formation caused by photochemical reactions since there are no major emission sources nearby except a 4-lane road running about 1.4 km to the west. The concentration of BC has been continuously measured since July 2010. However, the concentrations of inorganic ions were measured intermittently since February 2011. In the measurements in February, nitrate accounted for about 39% of the total inorganic ion concentrations and showed the highest correlation coefficient of 0.93 with ammonium. The fraction of sulfate among inorganic ions was about 31%, and the correlation coefficient with ammonium was 0.85, lower than that of nitrate. As was in other rural areas in Korea, potassium was highly correlated with major secondary ions such as sulfate, nitrate and ammonium, whose correlation coefficients were 0.70-0.74. Total inorganic ion concentrations were highest at 09:30 local time (LT) on February 9 probably due to the effect of vehicle emissions during the morning rush hour, but the concentration of nitrate was the highest at 13:00 LT on February 17 because of secondary ion formation just before a full development of the convective boundary layer. BC concentrations during the measurement period in February were generally higher at midnight than in the daytime including rush hours. BC showed moderately higher correlations with secondary ions. The BC concentration from MAAP obtained by aerosol absorption coefficient divided by mass

  16. Can heterotrophic uptake of dissolved organic carbon and zooplankton mitigate carbon budget deficits in annually bleached corals?

    NASA Astrophysics Data System (ADS)

    Levas, Stephen; Grottoli, Andréa G.; Schoepf, Verena; Aschaffenburg, Matthew; Baumann, Justin; Bauer, James E.; Warner, Mark E.

    2016-06-01

    Annual coral bleaching events due to increasing sea surface temperatures are predicted to occur globally by the mid-century and as early as 2025 in the Caribbean, and severely impact coral reefs. We hypothesize that heterotrophic carbon (C) in the form of zooplankton and dissolved organic carbon (DOC) is a significant source of C to bleached corals. Thus, the ability to utilize multiple pools of fixed carbon and/or increase the amount of fixed carbon acquired from one or more pools of fixed carbon (defined here as heterotrophic plasticity) could underlie coral acclimatization and persistence under future ocean-warming scenarios. Here, three species of Caribbean coral— Porites divaricata, P. astreoides, and Orbicella faveolata—were experimentally bleached for 2.5 weeks in two successive years and allowed to recover in the field. Zooplankton feeding was assessed after single and repeat bleaching, while DOC fluxes and the contribution of DOC to the total C budget were determined after single bleaching, 11 months on the reef, and repeat bleaching. Zooplankton was a large C source for P. astreoides, but only following single bleaching. DOC was a source of C for single-bleached corals and accounted for 11-36 % of daily metabolic demand (CHARDOC), but represented a net loss of C in repeat-bleached corals. In repeat-bleached corals, DOC loss exacerbated the negative C budgets in all three species. Thus, the capacity for heterotrophic plasticity in corals is compromised under annual bleaching, and heterotrophic uptake of DOC and zooplankton does not mitigate C budget deficits in annually bleached corals. Overall, these findings suggest that some Caribbean corals may be more susceptible to repeat bleaching than to single bleaching due to a lack of heterotrophic plasticity, and coral persistence under increasing bleaching frequency may ultimately depend on other factors such as energy reserves and symbiont shuffling.

  17. Quantification of the Contribution of CO2, HCO3-, and External Carbonic Anhydrase to Photosynthesis at Low Dissolved Inorganic Carbon in Chlorella saccharophila.

    PubMed Central

    Williams, T. G.; Colman, B.

    1995-01-01

    An equation has been developed incorporating whole-cell rate constants for CO2 and HCO3- that describes accurately photosynthesis (Phs) in suspensions of unicellular algae at low dissolved inorganic carbon. At pH 8.0 the concentration of CO2 available to the algal cells depends on the rate of supply from, and the loss to, HCO3- and the rate of use by the cells. At elevated cell densities (>30 mg chlorophyll [Chl] L-1), at which CO2 use by the cells is high, the slope of a graph of absolute Phs versus Chl concentration approaches the rate of Phs on a milligram of Chl basis because of HCO3- use alone. The slope of a graph of Phs versus HCO3- will be the rate constant for HCO3-, and for Chlorella saccharophila it was 0.16 L mg-1 Chl h-1. The difference between the constants for dissolved inorganic carbon (measured in cells with external carbonic anhydrase) and HCO3-1 is the constant for CO2, which was 26 L mg-1 Chl h-1. This difference causes the half-saturation constant for Phs to increase 5- to 6-fold at high cell densities. The increase in CO2 use as a result of external carbonic anhydrase is described mathematically as a function of cell density. PMID:12228358

  18. The Aspergillus nidulans ATM Kinase Regulates Mitochondrial Function, Glucose Uptake and the Carbon Starvation Response

    PubMed Central

    Krohn, Nadia Graciele; Brown, Neil Andrew; Colabardini, Ana Cristina; Reis, Thaila; Savoldi, Marcela; Dinamarco, Taísa Magnani; Goldman, Maria Helena S.; Goldman, Gustavo Henrique

    2013-01-01

    Mitochondria supply cellular energy and also perform a role in the adaptation to metabolic stress. In mammals, the ataxia-telangiectasia mutated (ATM) kinase acts as a redox sensor controlling mitochondrial function. Subsequently, transcriptomic and genetic studies were utilized to elucidate the role played by a fungal ATM homolog during carbon starvation. In Aspergillus nidulans, AtmA was shown to control mitochondrial function and glucose uptake. Carbon starvation responses that are regulated by target of rapamycin (TOR) were shown to be AtmA-dependent, including autophagy and hydrolytic enzyme secretion. AtmA also regulated a p53-like transcription factor, XprG, inhibiting starvation-induced XprG-dependent protease secretion and cell death. Thus, AtmA possibly represents a direct or indirect link between mitochondrial stress, metabolism, and growth through the influence of TOR and XprG function. The coordination of cell growth and division with nutrient availability is crucial for all microorganisms to successfully proliferate in a heterogeneous environment. Mitochondria supply cellular energy but also perform a role in the adaptation to metabolic stress and the cross-talk between prosurvival and prodeath pathways. The present study of Aspergillus nidulans demonstrated that AtmA also controlled mitochondrial mass, function, and oxidative phosphorylation, which directly or indirectly influenced glucose uptake. Carbon starvation responses, including autophagy, shifting metabolism to the glyoxylate cycle, and the secretion of carbon scavenging enzymes were AtmA-dependent. Transcriptomic profiling of the carbon starvation response demonstrated how TOR signaling and the retrograde response, which signals mitochondrial dysfunction, were directly or indirectly influenced by AtmA. The AtmA kinase was also shown to influence a p53-like transcription factor, inhibiting starvation-induced XprG-dependent protease secretion and cell death. Therefore, in response to metabolic

  19. The Effect of Injection Routes on the Biodistribution, Clearance and Tumor Uptake of Carbon Dots

    PubMed Central

    Huang, Xinglu; Zhang, Fan; Zhu, Lei; Choi, Ki Young; Guo, Ning; Guo, Jinxia; Tackett, Kenneth; Anilkumar, Parambath; Liu, Gang; Quan, Qimeng; Choi, Hak Soo; Niu, Gang; Sun, Ya-Ping; Lee, Seulki; Chen, Xiaoyuan

    2013-01-01

    The emergence of photoluminescent carbon-based nanomaterials has shown exciting potential in the development of benign nanoprobes. However, the in vivo kinetic behaviors of these particles that are necessary for clinical translation are poorly understood to date. In this study, fluorescent carbon dots (C-dots) were synthesized and the effect of three injection routes on their fate in vivo was explored by using both near-infrared fluorescence (NIRF) and positron emission tomography (PET) imaging techniques. We found that C-dots are efficiently and rapidly excreted from the body after all three injection routes. The clearance rate of C-dots is ranked as: intravenous > intramuscular > subcutaneous. The particles had relatively low retention in the reticuloendothelial system (RES) and showed high tumor-to-background contrast. Furthermore, different injection routes also resulted in different blood clearance patterns and tumor uptakes of C-dots. These results satisfy the need for clinical translation and should promote efforts to further investigate the possibility of using carbon-based nanoprobes in a clinical setting. More broadly, we provide a testing blueprint for in vivo behavior of nanoplatforms under various injection routes, an important step forward towards safety and efficacy analysis of nanoparticles. PMID:23731122

  20. Role of reaction resistance in limiting carbon monoxide uptake in rabbit lungs.

    PubMed

    Heller, H; Schuster, K

    1998-06-01

    The contribution of reaction resistance to overall resistance to pulmonary carbon monoxide (CO) uptake [DLCO/(ThetaCO . Vc), where DLCO is lung CO diffusing capacity, ThetaCO is CO uptake conductance of erythrocytes, and Vc is pulmonary capillary blood volume] was determined in 10 anesthetized, paralyzed, and artificially ventilated rabbits. On the basis of the classical double-reciprocal equation of F. G. W. Roughton and R. E. Forster (J. Appl. Physiol. 11: 290-302, 1957), DLCO/(ThetaCO . Vc) was obtained by solving the relation DLCO/(ThetaCO . Vc) = 1 - 2/(DLNO/DLCO), where DLNO/DLCO represents the ratio between the respective single-breath diffusing capacities (DL) of nitric oxide (NO) and CO pulmonary capillary blood. The lungs of eight rabbits were inflated, starting from residual volume, by using 55 ml of indicator gas mixture (0.2% CO and 0.05% NO in nitrogen). DL values were calculated by taking the end-tidal partial pressures of CO and NO as analyzed by using a respiratory mass spectrometer. The overall value was DLCO/(ThetaCO . Vc) = 0.4 +/- 0.025 (mean +/- SD). Because of the use of O2-free indicator gas mixtures, the end-tidal O2 partial pressures were approximately 21 Torr. In one other rabbit, the application of 0.2% CO and 0.001% NO yielded DLCO/(ThetaCO . Vc) = 0.39; in the tenth rabbit, however, inspiratory volume was varied, and an identical value was found at functional residual capacity. We conclude that the contribution of reaction resistance to overall resistance to pulmonary CO uptake is independent of the inspiratory NO concentration used, including, with respect to the pertinent literature, the conclusion that in rabbits, dogs, and humans this contribution amounts to 40% when determined at functional residual capacity.

  1. Using satellite-derived optical thickness to assess the influence of clouds on terrestrial carbon uptake

    NASA Astrophysics Data System (ADS)

    Cheng, S. J.; Steiner, A. L.; Hollinger, D. Y.; Bohrer, G.; Nadelhoffer, K. J.

    2016-07-01

    Clouds scatter direct solar radiation, generating diffuse radiation and altering the ratio of direct to diffuse light. If diffuse light increases plant canopy CO2 uptake, clouds may indirectly influence climate by altering the terrestrial carbon cycle. However, past research primarily uses proxies or qualitative categories of clouds to connect the effect of diffuse light on CO2 uptake to sky conditions. We mechanistically link and quantify effects of cloud optical thickness (τc) to surface light and plant canopy CO2 uptake by comparing satellite retrievals of τc to ground-based measurements of diffuse and total photosynthetically active radiation (PAR; 400-700 nm) and gross primary production (GPP) in forests and croplands. Overall, total PAR decreased with τc, while diffuse PAR increased until an average τc of 6.8 and decreased with larger τc. When diffuse PAR increased with τc, 7-24% of variation in diffuse PAR was explained by τc. Light-use efficiency (LUE) in this range increased 0.001-0.002 per unit increase in τc. Although τc explained 10-20% of the variation in LUE, there was no significant relationship between τc and GPP (p > 0.05) when diffuse PAR increased. We conclude that diffuse PAR increases under a narrow range of optically thin clouds and the dominant effect of clouds is to reduce total plant-available PAR. This decrease in total PAR offsets the increase in LUE under increasing diffuse PAR, providing evidence that changes within this range of low cloud optical thickness are unlikely to alter the magnitude of terrestrial CO2 fluxes.

  2. Feasibility of CO₂/SO₂ uptake enhancement of calcined limestone modified with rice husk ash during pressurized carbonation.

    PubMed

    Chen, Huichao; Zhao, Changsui; Ren, Qiangqiang

    2012-01-01

    The calcination/carbonation cycle using calcium-based sorbents appears to be a viable method for carbon dioxide (CO₂) capture from combustion gases. Recent attempts to improve the CO₂/SO₂ uptake of a calcium-based sorbent modified by using rice husk ash (RHA) in the hydration process have succeeded in enhancing its effectiveness. The optimal mole ratio of RHA to calcined limestone (M(Si/Ca)) was adjusted to 0.2. The cyclic CO₂ capture characteristics and the SO₂ uptake activity of the modified sorbent were evaluated in a calcination/pressurized carbonation reactor system. Scanning electron microscope (SEM) images and X-ray diffraction (XRD) spectrum of the sorbent were also taken to supplement the study. The results showed that the carbonation conversion was greatly increased for the sorbent with M(Si/Ca) ratio of 0.2. For this sorbent formulation the optimal operating conditions were 700-750 °C and 0.5-0.7 MPa. CO₂ absorption was not proportional to CO₂ concentration in the carbonation atmosphere, but was directly related to reaction time. The CO₂ uptake decreased in the presence of SO₂. SO₂ uptake increased, and the total calcium utilization was maintained over multiple cycles. Analysis has shown that the silicate component is evenly or well distributed, and this serves as a framework to prevent sintering, thus preserving the available microstructure for reaction. The sorbent also displayed high activity to SO₂ absorption and could be used to capture CO₂ and SO₂ simultaneously.

  3. Phytotoxicity, Uptake, and Translocation of Fluorescent Carbon Dots in Mung Bean Plants.

    PubMed

    Li, Wei; Zheng, Yinjian; Zhang, Haoran; Liu, Zulang; Su, Wei; Chen, Shi; Liu, Yingliang; Zhuang, Jianle; Lei, Bingfu

    2016-08-10

    Fluorescent carbon dots (CDs) have been widely studied in bioscience and bioimaging, but the effect of CDs on plants has been rarely studied. Herein, mung bean was adopted as a model plant to study the phytotoxicity, uptake, and translocation of red emissive CDs in plants. The incubation with CDs at a concentration range from 0.1 to 1.0 mg/mL induced physiological response of mung bean plant and imposed no phytotoxicity on mung bean growth. The lengths of the root and stem presented an increasing trend up to the treatment of 0.4 mg/mL. Confocal imaging showed that CDs were transferred from the roots to the stems and leaves by the vascular system through the apoplastic pathway. The uptake kinetics study was performed and demonstrated that the CDs were abundantly incubated by mung beans during both germination and growth periods. Furthermore, in vivo visualization of CDs provides potential for their successful application as delivery vehicles in plants based on the unique optical properties. PMID:27425200

  4. Phytotoxicity, Uptake, and Translocation of Fluorescent Carbon Dots in Mung Bean Plants.

    PubMed

    Li, Wei; Zheng, Yinjian; Zhang, Haoran; Liu, Zulang; Su, Wei; Chen, Shi; Liu, Yingliang; Zhuang, Jianle; Lei, Bingfu

    2016-08-10

    Fluorescent carbon dots (CDs) have been widely studied in bioscience and bioimaging, but the effect of CDs on plants has been rarely studied. Herein, mung bean was adopted as a model plant to study the phytotoxicity, uptake, and translocation of red emissive CDs in plants. The incubation with CDs at a concentration range from 0.1 to 1.0 mg/mL induced physiological response of mung bean plant and imposed no phytotoxicity on mung bean growth. The lengths of the root and stem presented an increasing trend up to the treatment of 0.4 mg/mL. Confocal imaging showed that CDs were transferred from the roots to the stems and leaves by the vascular system through the apoplastic pathway. The uptake kinetics study was performed and demonstrated that the CDs were abundantly incubated by mung beans during both germination and growth periods. Furthermore, in vivo visualization of CDs provides potential for their successful application as delivery vehicles in plants based on the unique optical properties.

  5. Carbon Nanotubes Enhance CpG Uptake and Potentiate Anti-Glioma Immunity

    PubMed Central

    Zhao, Dongchang; Alizadeh, Darya; Zhang, Leying; Liu, Wei; Farrukh, Omar; Manuel, Edwin; Diamond, Don J.; Badie, Behnam

    2010-01-01

    Purpose Stimulation of toll-like receptor-9 (TLR9) by CpG oligodeoxynucleotides (CpG) has been shown to counteract the immunosuppressive microenvironment and to inhibit tumor growth in glioma models. Since TLR9 is located intracellularly, we hypothesized that methods that enhance its internalization may also potentiate its immunostimulatory response. The goal of this study was to evaluate carbon nanotubes (CNTs) as a CpG delivery vehicle in brain tumor models. Experimental Design Functionalized single-walled CNTs were conjugated with CpG (CNT-CpG) and evaluated in vitro and in mice bearing intracranial GL261 gliomas. Flow cytometry was used to assess CNT-CpG uptake and anti-glioma immune response. Tumor growth was measured by bioluminescent imaging, histology, and animal survival. Results CNT-CpG was nontoxic and enhanced CpG uptake both in vitro and intracranial gliomas. CNT-mediated CpG delivery also potentiated pro-inflammatory cytokine production by primary monocytes. Interestingly, a single intracranial injection of low-dose CNT-CpG (but not free CpG or blank CNT) eradicated intracranial GL261 gliomas in half of tumor-bearing mice. Moreover, surviving animals exhibited durable tumor-free remission (> 3 months), and were protected from intracranial tumor rechallenge, demonstrating induction of long-term anti-tumor immunity. Conclusions These findings suggest that CNTs can potentiate CpG immunopotency by enhancing its delivery into tumor-associated inflammatory cells. PMID:21088258

  6. Dissolved inorganic carbon (DIC) and its δ13C in the Ganga (Hooghly) River estuary, India: Evidence of DIC generation via organic carbon degradation and carbonate dissolution

    NASA Astrophysics Data System (ADS)

    Samanta, Saumik; Dalai, Tarun K.; Pattanaik, Jitendra K.; Rai, Santosh K.; Mazumdar, Aninda

    2015-09-01

    In this study, we present comprehensive data on dissolved Ca, dissolved inorganic carbon (DIC) and its carbon isotope composition (δ13CDIC) of (i) the Ganga (Hooghly) River estuary water sampled during six seasons of contrasting water discharge over 2 years (2012 and 2013), (ii) shallow groundwater from areas adjacent to the estuary and (iii) industrial effluent water and urban wastewater draining into the estuary. Mass balance calculations indicate that processes other than the conservative mixing of seawater and river water are needed to explain the measured DIC and δ13CDIC. Results of mixing calculations in conjunction with the estimated undersaturated levels of dissolved O2 suggest that biological respiration and organic carbon degradation dominate over biological production in the estuary. An important outcome of this study is that a significant amount of DIC and dissolved Ca is produced within the estuary at salinity ⩾10, particularly during the monsoon period. Based on consideration of mass balance and a strong positive correlation observed between the "excess" DIC and "excess" Ca, we contend that the dominant source of DIC generated within the estuary is carbonate dissolution that is inferred to be operating in conjunction with degradation of organic carbon. Calculations show that groundwater cannot account for the observed "excess" Ca in the high salinity zone. Estimated DIC contributions from anthropogenic activity are minor, and they constitute ca. 2-3% of the river water DIC concentrations. The estimated annual DIC flux from the estuary to the Bay of Bengal is ca. (3-4) × 1012 g, of which ca. 40-50% is generated within the estuary. The monsoon periods account for the majority (ca. 70%) of the annual DIC generation in the estuary. The annual DIC flux from the Hooghly estuary accounts for ca. 1% of the global river DIC flux to the oceans. This is disproportionately higher than the water contribution from the Hooghly River to the oceans, which

  7. Interannual Variation in Carbon Sequestration Depends Mainly on the Carbon Uptake Period in Two Croplands on the North China Plain

    PubMed Central

    Bao, Xueyan; Wen, Xuefa; Sun, Xiaomin; Zhao, Fenghua; Wang, Yuying

    2014-01-01

    Interannual variation in plant phenology can lead to major modifications in the interannual variation of net ecosystem production (NEP) and net biome production (NBP) as a result of recent climate change in croplands. Continuous measurements of carbon flux using the eddy covariance technique were conducted in two winter wheat and summer maize double-cropped croplands during 2003–2012 in Yucheng and during 2007–2012 in Luancheng on the North China Plain. Our results showed that the difference between the NEP and the NBP, i.e., the crop economic yield, was conservative even though the NEP and the NBP for both sites exhibited marked fluctuations during the years of observation. A significant and positive relationship was found between the annual carbon uptake period (CUP) and the NEP as well as the NBP. The NEP and the NBP would increase by 14.8±5.2 and 14.7±6.6 g C m−2 yr−1, respectively, if one CUP-day was extended. A positive relationship also existed between the CUP and the NEP as well as the NBP for winter wheat and summer maize, respectively. The annual air temperature, through its negative effect on the start date of the CUP, determined the length of the CUP. The spring temperature was the main indirect factor controlling the annual carbon sequestration when a one-season crop (winter wheat) was considered. Thus, global warming can be expected to extend the length of the CUP and thus increase carbon sequestration in croplands. PMID:25313713

  8. Interannual variation in carbon sequestration depends mainly on the carbon uptake period in two croplands on the North China Plain.

    PubMed

    Bao, Xueyan; Wen, Xuefa; Sun, Xiaomin; Zhao, Fenghua; Wang, Yuying

    2014-01-01

    Interannual variation in plant phenology can lead to major modifications in the interannual variation of net ecosystem production (NEP) and net biome production (NBP) as a result of recent climate change in croplands. Continuous measurements of carbon flux using the eddy covariance technique were conducted in two winter wheat and summer maize double-cropped croplands during 2003-2012 in Yucheng and during 2007-2012 in Luancheng on the North China Plain. Our results showed that the difference between the NEP and the NBP, i.e., the crop economic yield, was conservative even though the NEP and the NBP for both sites exhibited marked fluctuations during the years of observation. A significant and positive relationship was found between the annual carbon uptake period (CUP) and the NEP as well as the NBP. The NEP and the NBP would increase by 14.8±5.2 and 14.7±6.6 g C m(-2) yr(-1), respectively, if one CUP-day was extended. A positive relationship also existed between the CUP and the NEP as well as the NBP for winter wheat and summer maize, respectively. The annual air temperature, through its negative effect on the start date of the CUP, determined the length of the CUP. The spring temperature was the main indirect factor controlling the annual carbon sequestration when a one-season crop (winter wheat) was considered. Thus, global warming can be expected to extend the length of the CUP and thus increase carbon sequestration in croplands. PMID:25313713

  9. Carbon Metabolism, Uptake Kinetics, and Export: how Watershed Form Influences Carbon Mobilization and In-Stream Transformations in Headwater Catchments

    NASA Astrophysics Data System (ADS)

    Seybold, E. C.; McGlynn, B. L.

    2014-12-01

    Previous research has demonstrated the highly dynamic nature of hydrologic connectivity, and the vertical and spatial expansion of the active watershed area during wet periods. While activation of variable DOM and solute sources during expansion and contraction periods has been well documented in a number of systems, changes in nutrient loading to streams have rarely been linked explicitly to in-stream function. To this end, we investigated the linkages between terrestrial mobilization of DOC and DIC, in-stream biogeochemical cycling, and downstream transport across scales in two geomorphically contrasting watersheds located in Tenderfoot Creek Experimental Forest, Montana. We deployed a network of in-situ high frequency sensors with a focus on CO2, dissolved oxygen, fluorescent DOM, nitrate, and a suite of supporting chemical constituents every 30 minutes beginning with the onset of snowmelt and through summer baseflow recession. Our results suggest that DOM and DIC fluxes, as well as ecosystem processes such as metabolism, were coupled to watershed scale carbon accumulation and mobilization. In both watersheds, metabolism tracked the temporal trends of DOM loading from the terrestrial landscape, indicating that the streams are actively transforming allochthonous organic materials during transport. Headwater stream reaches in the watershed with more hydrologically connected riparian source areas exhibited elevated metabolism, carbon uptake, and carbon export as compared to streams in the watershed with less riparian connectivity, suggesting that the degree of riparian connectivity may explain spatial variation in metabolism and in-stream carbon cycling within and across stream networks. Ultimately, this study highlights the tight coupling between terrestrial uplands and in-stream ecosystem processes in headwater catchments, and identifies spatio-temporal variation in hydrologic connectivity as a key driver of in-stream metabolic variation. We posit that the

  10. The role of carbon in fungal nutrient uptake and transport: implications for resource exchange in the arbuscular mycorrhizal symbiosis.

    PubMed

    Fellbaum, Carl R; Mensah, Jerry A; Pfeffer, Philip E; Kiers, E Toby; Bücking, Heike

    2012-11-01

    The arbuscular mycorrhizal (AM) symbiosis, which forms between plant hosts and ubiquitous soil fungi of the phylum Glomeromycota, plays a key role for the nutrient uptake of the majority of land plants, including many economically important crop species. AM fungi take up nutrients from the soil and exchange them for photosynthetically fixed carbon from the host. While our understanding of the exact mechanisms controlling carbon and nutrient exchange is still limited, we recently demonstrated that (i) carbon acts as an important trigger for fungal N uptake and transport, (ii) the fungus changes its strategy in response to an exogenous supply of carbon, and that (iii) both plants and fungi reciprocally reward resources to those partners providing more benefit. Here, we summarize recent research findings and discuss the implications of these results for fungal and plant control of resource exchange in the AM symbiosis.

  11. Potential near-future carbon uptake overcomes losses from a large insect outbreak in British Columbia, Canada

    NASA Astrophysics Data System (ADS)

    Arora, Vivek K.; Peng, Yiran; Kurz, Werner A.; Fyfe, John C.; Hawkins, Barbara; Werner, Arelia T.

    2016-03-01

    The current capacity of northern high-latitude forests to sequester carbon has been suggested to be undermined by the potential increase in fire and insect outbreaks. Here we investigate the response of the terrestrial ecosystems in the province of British Columbia (BC), Canada, to the recent large mountain pine beetle (MPB) outbreak that started in 1999 as well as changing climate and continually increasing atmospheric CO2 concentration up to 2050, in a combined framework, using a process-based model. Model simulations suggest that the recent MPB outbreak results in BC's forests accumulating 328 Tg less carbon over the 1999-2020 period. Over this same period changing climate and increasing atmospheric CO2 concentration, however, yield enhanced carbon uptake equal to a cumulative sink of around 900-1060 Tg C, depending on the future climate change scenario, indicating that the reduced carbon uptake by land due to the MPB disturbance may already be surpassed by 2020.

  12. Sites of calcium uptake of fish otoliths correspond with macular regions rich of carbonic anhydrase

    NASA Astrophysics Data System (ADS)

    Beier, M.; Anken, R.; Hilbig, R.

    2006-01-01

    Based on pharmacological data, it has been suggested that the enzyme carbonic anhydrase (CAH) plays a prominent role in the mineralization of fish otoliths. To directly test this proposal, the topographical distribution of CAH was histochemically analyzed in the utricular and saccular maculae of larval cichlid fish Oreochromis mossambicus. Further investigations were focussed on the sites of otolithic calcium uptake using the fluorescent calcium tracer alizarin-complexone (AC). Both in the utricle and the saccule, CAH-reactivity was prominent in regions on both sides of the sensory macula (centrifugal (cf) and centripetal (cp) areas), which reportedly contain ionocytes, specialized cells regulating the ionic composition of the endolymph. (The terms centrifugal and centripetal were chosen instead of lateral and medial, because the saccule is positioned perpendicular to the utricle; “lateral” and “medial” thus do not allow an unambiguous allocation of the respective regions.) In the saccule, the size of cf and cp did not differ from each other, whereas, in the utricle, cp was considerably larger as compared to cf (CAH-reactivity per μm2 was nearly identical in both areas of both endorgans). AC-incubation resulted in a fluorescent band on the proximal surface of the otoliths (this surface lies next to the sensory epithelium). In saccular otoliths (sagittae), the area of the band did not differ between centrifugal and centripetal otolith regions, whereas in the utricular otoliths (lapilli), the area of the centripetal AC-band was larger in size as compared to the centrifugal one (AC-fluorescence per μm2 did not differ between the areas analyzed in both types of otoliths). These results strongly suggest that calcium/carbonate uptake of otoliths takes place especially in those regions of their proximal face which are located adjacent to CAH-rich areas of the macular epithelium. It is thus concluded that CAH is directly involved in otolith calcification. The

  13. Global Distribution of Total Inorganic Carbon and Total Alkalinity below the Deepest Winter Mixed Layer Depths

    SciTech Connect

    Goyet, C.; Healy, R.; Ryan, J.; Kozyr, A.

    2000-05-01

    Modeling the global ocean-atmosphere carbon dioxide system is becoming increasingly important to greenhouse gas policy. These models require initialization with realistic three-dimensional (3-D) oceanic carbon fields. This report presents an approach to establishing these initial conditions from an extensive global database of ocean carbon dioxide (CO{sub 2}) system measurements and well-developed interpolation methods.

  14. Nitrogen uptake by natural populations of phytoplankton and primary production in the Pacific Ocean: regional variability of uptake capacity

    SciTech Connect

    Kanda, J.; Saino, T.; Hattori, A.

    1985-09-01

    Uptake of nitrogenous nutrients (ammonium, nitrate, and urea) and inorganic carbon by natural populations of phytoplankton in surface waters of the Pacific Ocean was measured by a /sup 13/C-/sup 15/N dual tracer technique. Regional variability of uptake capacity and its correlation with environmental parameters were examined. The uptakes proceeded linearly with time for at least 3 h. Half-saturation constants for uptake of ammonium, nitrate, and urea were generally low (about 0.1 ..mu..g-atom N liter/sup -1/). The maximum uptake rate of nitrate was well correlated with the uptake of inorganic carbon; these two rates expressed on a chlorophyll a basis were relatively lower at higher latitude stations. Maximum uptake rates of ammonium and urea clearly covaried with the ambient water temperature. The estimated turnover times of ammonium at subtropical and tropical stations ranged from 1 to 3 days. The contribution of uptake in the dark was larger at low latitude stations. Regional variation of uptake capacity is correlated with temperature and possibly light, but not with nutrient supply.

  15. Heterotrophic bacterioplankton control on organic and inorganic carbon cycle in stratified and non-stratified lakes of NW Russia

    NASA Astrophysics Data System (ADS)

    Shirokova, Liudmila; Vorobjeva, Taissia; Zabelina, Svetlana; Moreva, Olga; Klimov, Sergey; Shorina, Natalja; Chupakov, Artem; Pokrovsky, Oleg; Audry, Stephan; Viers, Jerome

    2010-05-01

    Lakes of boreal zone regulate the fate of dissolved carbon, nutrients and trace metals during their transport from the watershed to the ocean. Study of primary production - mineralization processes in the context of carbon biogeochemical cycle allows determination of the rate and mechanisms of phytoplankton biomass production and its degradation via aquatic heterotrophic bacteria. In particular, comparative study of vertical distribution of Dissolved Organic Carbon (DOC) in stratified and non-stratified lakes allows establishing the link between biological and chemical aspects of the carbon cycle which, in turns, determines an environmental stability and recovering potential of the entire ecosystem. In order to better understand the biogeochemical mechanisms that control dissolved organic and inorganic carbon migration in surface boreal waters, we studied in 2007-2009 two strongly stratified lakes (15-20 m deep) and two shallow lakes (2-4 m deep) in the Arkhangelsk region (NW Russia, White Sea basin). We conducted natural experiments of the lake water incubation for measurements of the intensity of production/mineralization processes and we determined vertical concentration of DOC during four basic hydrological seasons (winter and summer stratification, and spring and autumn lake overturn). Our seasonal studies of production/mineralization processes demonstrated high intensity of organic matter formation during summer period and significant retard of these processes during winter stagnation. During spring period, there is a strong increase of bacterial destruction of the allochtonous organic matter that is being delivered to the lake via terrigenous input. During autumn overturn, there is a decrease of the activity of phytoplankton, and the degradation of dead biomass by active bacterial community. Organic matter destruction processes are the most active in Svyatoe lake, whereas in the Beloe lake, the rate of organic matter production is significantly higher than

  16. Submicron magnetite grains and carbon compounds in Martian meteorite ALH84001: inorganic, abiotic formation by shock and thermal metamorphism.

    PubMed

    Treiman, Allan H

    2003-01-01

    Purported biogenic features of the ALH84001 Martian meteorite (the carbonate globules, their submicron magnetite grains, and organic matter) have reasonable inorganic origins, and a comprehensive hypothesis is offered here. The carbonate globules were deposited from hydrothermal water, without biological mediation. Thereafter, ALH84001 was affected by an impact shock event, which raised its temperature nearly instantaneously to 500-700K, and induced iron-rich carbonate in the globules to decompose to magnetite and other minerals. The rapidity of the temperature increase caused magnetite grains to nucleate in abundance; hence individual crystals were very small. Nucleation and growth of magnetite crystals were fastest along edges and faces of the precursor carbonate grains, forcing the magnetite grains to be platy or elongated, including the "truncated hexa-octahedra" shape. ALH84001 had formed at some depth within Mars where the lithostatic pressure was significantly above that of Mars' surface. Also, because the rock was at depth, the impact heat dissipated slowly. During this interval, magnetite crystals approached chemical equilibria with surrounding minerals and gas. Their composition, nearly pure Fe(3)O(4), reflects those of equilibria; elements that substitute into magnetite are either absent from iron-rich carbonate (e.g., Ti, Al, Cr), or partitioned into other minerals during magnetite formation (Mg, Mn). Many microstructural imperfections in the magnetite grains would have annealed out as the rock cooled. In this post-shock thermal regime, carbon-bearing gas from the decomposition of iron carbonates reacted with water in the rock (or from its surroundings) to produce organic matter via Fischer-Tropschlike reactions. Formation of such organic compounds like polycyclic aromatic hydrocarbons would have been catalyzed by the magnetite (formation of graphite, the thermochemically stable phase, would be kinetically hindered). PMID:14577885

  17. Submicron Magnetite Grains and Carbon Compounds in Martian Meteorite ALH84001: Inorganic, Abiotic Formation by Shock and Thermal Metamorphism

    NASA Astrophysics Data System (ADS)

    Treiman, Allan H.

    2003-06-01

    Purported biogenic features of the ALH84001 Martian meteorite (the carbonate globules, their submicron magnetite grains, and organic matter) have reasonable inorganic origins, and a comprehensive hypothesis is offered here. The carbonate globules were deposited from hydrothermal water, without biological mediation. Thereafter, ALH84001 was affected by an impact shock event, which raised its temperature nearly instantaneously to 500-700K, and induced iron-rich carbonate in the globules to decompose to magnetite and other minerals. The rapidity of the temperature increase caused magnetite grains to nucleate in abundance; hence individual crystals were very small. Nucleation and growth of magnetite crystals were fastest along edges and faces of the precursor carbonate grains, forcing the magnetite grains to be platy or elongated, including the "truncated hexa-octahedra" shape. ALH84001 had formed at some depth within Mars where the lithostatic pressure was significantly above that of Mars' surface. Also, because the rock was at depth, the impact heat dissipated slowly. During this interval, magnetite crystals approached chemical equilibria with surrounding minerals and gas. Their composition, nearly pure Fe3O4, reflects those of equilibria; elements that substitute into magnetite are either absent from iron-rich carbonate (e.g., Ti, Al, Cr), or partitioned into other minerals during magnetite formation (Mg, Mn). Many microstructural imperfections in the magnetite grains would have annealed out as the rock cooled. In this post-shock thermal regime, carbon-bearing gas from the decomposition of iron carbonates reacted with water in the rock (or from its surroundings) to produce organic matter via Fischer-Tropschlike reactions. Formation of such organic compounds like polycyclic aromatic hydrocarbons would have been catalyzed by the magnetite (formation of graphite, the thermochemically stable phase, would be kinetically hindered).

  18. Submicron magnetite grains and carbon compounds in Martian meteorite ALH84001: inorganic, abiotic formation by shock and thermal metamorphism.

    PubMed

    Treiman, Allan H

    2003-01-01

    Purported biogenic features of the ALH84001 Martian meteorite (the carbonate globules, their submicron magnetite grains, and organic matter) have reasonable inorganic origins, and a comprehensive hypothesis is offered here. The carbonate globules were deposited from hydrothermal water, without biological mediation. Thereafter, ALH84001 was affected by an impact shock event, which raised its temperature nearly instantaneously to 500-700K, and induced iron-rich carbonate in the globules to decompose to magnetite and other minerals. The rapidity of the temperature increase caused magnetite grains to nucleate in abundance; hence individual crystals were very small. Nucleation and growth of magnetite crystals were fastest along edges and faces of the precursor carbonate grains, forcing the magnetite grains to be platy or elongated, including the "truncated hexa-octahedra" shape. ALH84001 had formed at some depth within Mars where the lithostatic pressure was significantly above that of Mars' surface. Also, because the rock was at depth, the impact heat dissipated slowly. During this interval, magnetite crystals approached chemical equilibria with surrounding minerals and gas. Their composition, nearly pure Fe(3)O(4), reflects those of equilibria; elements that substitute into magnetite are either absent from iron-rich carbonate (e.g., Ti, Al, Cr), or partitioned into other minerals during magnetite formation (Mg, Mn). Many microstructural imperfections in the magnetite grains would have annealed out as the rock cooled. In this post-shock thermal regime, carbon-bearing gas from the decomposition of iron carbonates reacted with water in the rock (or from its surroundings) to produce organic matter via Fischer-Tropschlike reactions. Formation of such organic compounds like polycyclic aromatic hydrocarbons would have been catalyzed by the magnetite (formation of graphite, the thermochemically stable phase, would be kinetically hindered).

  19. Comparison of carbon uptake estimates from forest inventory and Eddy-Covariance for a montane rainforest in central Sulawesi

    NASA Astrophysics Data System (ADS)

    Heimsch, Florian; Kreilein, Heiner; Rauf, Abdul; Knohl, Alexander

    2016-04-01

    Rainforests in general and montane rainforests in particular have rarely been studied over longer time periods. We aim to provide baseline information of a montane tropical forest's carbon uptake over time in order to quantify possible losses through land-use change. Thus we conducted a re-inventory of 22 10-year old forest inventory plots, giving us a rare opportunity to quantify carbon uptake over such a long time period by traditional methods. We discuss shortfalls of such techniques and why our estimate of 1.5 Mg/ha/a should be considered as the lower boundary and not the mean carbon uptake per year. At the same location as the inventory, CO2 fluxes were measured with the Eddy-Covariance technique. Measurements were conducted at 48m height with an LI 7500 open-path infrared gas analyser. We will compare carbon uptake estimates from these measurements to those of the more conventional inventory method and discuss, which factors are probably responsible for differences.

  20. Biodynamic modeling of PCB uptake by Macoma balthica and Corbicula fluminea from sediment amended with activated carbon

    USGS Publications Warehouse

    McLeod, Pamela B.; Luoma, S.N.; Luthy, R.G.

    2008-01-01

    Activated carbon amendment was assessed in the laboratory as a remediation strategy for freshwater sediment contaminated with polychlorinated biphenyls (PCBs) from the Grasse River (near Massena, NY). Three end points were evaluated: aqueous equilibrium PCB concentration, uptake into semipermeable membrane devices (SPMDs), and 28-day bioaccumulation in the clam Corbicula fluminea. PCB uptake by water, SPMDs, and clams followed similar trends, with reductions increasing as a function of carbon dose. Average percent reductions in clam tissue PCBs were 67, 86, and 95% for activated carbon doses of 0.7, 1.3, and 2.5% dry wt, respectively. A biodynamic model that incorporates sediment geochemistry and dietary and aqueous uptake routes was found to agree well with observed uptake by C. fluminea in our laboratory test systems. Results from this study were compared to 28-day bioaccumulation experiments involving PCB-contaminated sediment from Hunters Point Naval Shipyard (San Francisco Bay, CA) and the clam Macoma balthica. Due to differences in feeding strategy, M. balthica deposit-feeds whereas C. fluminea filter-feeds, the relative importance of the aqueous uptake route is predicted to be much higher for C. fluminea than for M. balthica. Whereas M. balthica takes up approximately 90% of its body burden through sediment ingestion, C. fluminea only accumulates approximately 45% via this route. In both cases, results strongly suggest that it is the mass transfer of PCBs from native sediment to added carbon particles, not merely reductions in aqueous PCB concentrations, that effectively reduces PCB bioavailability and uptake by sediment-dwelling organisms. ?? 2008 American Chemical Society.

  1. [Spatial-temporal distributions of dissolved inorganic carbon and its affecting factors in the Yellow River estuary].

    PubMed

    Guo, Xing-Sen; Lü, Ying-Chun; Sun, Zhi-Gao; Wang, Chuan-Yuan; Zhao, Quan-Sheng

    2015-02-01

    Estuary is an important area contributing to the global carbon cycle. In order to analyze the spatial-temporal distribution characteristics of the dissolved inorganic carbon (DIC) in the surface water of Yellow River estuary. Samples were collected in spring, summer, fall, winter of 2013, and discussed the correlation between the content of DIC and environmental factors. The results show that, the DIC concentration of the surface water in Yellow River estuary is in a range of 26.34-39.43 mg x L(-1), and the DIC concentration in freshwater side is higher than that in the sea side. In some areas where the salinity is less than 15 per thousand, the DIC concentration appears significant losses-the maximum loss is 20.46%. Seasonal distribution of performance in descending order is spring, fall, winter, summer. Through principal component analysis, it shows that water temperature, suspended solids, salinity and chlorophyll a are the main factors affecting the variation of the DIC concentration in surface water, their contribution rate is as high as 83% , and alkalinity, pH, dissolved organic carbon, dissolved oxygen and other factors can not be ignored. The loss of DIC in the low area is due to the calcium carbonate sedimentation. DIC presents a gradually increasing trend, which is mainly due to the effects of water retention time, temperature, outside input and environmental conditions.

  2. Quantitative evaluation of multi-walled carbon nanotube uptake in wheat and rapeseed.

    PubMed

    Larue, Camille; Pinault, Mathieu; Czarny, Bertrand; Georgin, Dominique; Jaillard, Danielle; Bendiab, Nedjma; Mayne-L'Hermite, Martine; Taran, Frédéric; Dive, Vincent; Carrière, Marie

    2012-08-15

    Environmental contamination with carbon nanotubes would lead to plant exposure and particularly exposure of agricultural crops. The only quantitative exposure data available to date which can be used for risk assessment comes from computer modeling. The aim of this study was to provide quantitative data relative to multi-walled carbon nanotube (MWCNT) uptake and distribution in agricultural crops, and to correlate accumulation data with impact on plant development and physiology. Roots of wheat and rapeseed were exposed in hydroponics to uniformly (14)C-radiolabeled MWCNTs. Radioimaging, transmission electron microscopy and raman spectroscopy were used to identify CNT distribution. Radioactivity counting made it possible absolute quantification of CNT accumulation in plant leaves. Impact of CNTs on seed germination, root elongation, plant biomass, evapotranspiration, chlorophyll, thiobarbituric acid reactive species and H(2)O(2) contents was evaluated. We demonstrate that less than 0.005‰ of the applied MWCNT dose is taken up by plant roots and translocated to the leaves. This accumulation does not impact plant development and physiology. In addition, it does not induce any modifications in photosynthetic activity nor cause oxidative stress in plant leaves. Our results suggest that if environmental contamination occurs and MWCNTs are in the same physico-chemical state than the ones used in the present article, MWCNT transfer to the food chain via food crops would be very low.

  3. CARBON NANOMATERIALS AS CATALYSTS FOR HYDROGEN UPTAKE AND RELEASE IN NAALH4

    SciTech Connect

    Berseth, P; Ragaiy Zidan, R; Andrew Harter, A

    2008-06-19

    A synergistic approach involving experiment and first-principles theory not only shows that carbon nanostructures can be used as catalysts for hydrogen uptake and release in complex metal hydrides such as sodium alanate, NaAlH{sub 4}, but also provides an unambiguous understanding of how the catalysts work. The stability of NaAlH{sub 4} originates from the charge transfer from Na to the AlH{sub 4} moiety, resulting in an ionic bond between Na{sup +} and AlH{sub 4}{sup -} and a covalent bond between Al and H. Interaction of NaAlH{sub 4} with an electro-negative substrate such as carbon fullerene or nanotube affects the ability of Na to donate its charge to AlH{sub 4}, consequently weakening the Al-H bond and causing hydrogen to desorb at lower temperatures as well as facilitating the absorption of H{sub 2} to reverse the dehydrogenation reaction. Ab initio molecular dynamics simulation further reveals the time evolution of the charge transfer process with hydrogen desorption occurring when the charge transfer is complete.

  4. Observations of the uptake of carbonyl sulfide (COS) by trees under elevated atmospheric carbon dioxide concentrations

    NASA Astrophysics Data System (ADS)

    Sandoval-Soto, L.; Kesselmeier, M.; Schmitt, V.; Wild, A.; Kesselmeier, J.

    2012-02-01

    Global change affects ecosystems to adapt to elevated atmospheric concentrations of carbon dioxide (CO2). We understand that carbonyl sulfide (COS), a trace gas which is involved in building up the stratospheric sulfate aerosol layer, is taken up by vegetation with the same triad of the enzmyes which are metabolizing the CO2, i.e. Ribulose-1,5-bisphosphate Carboxylase-Oxygenase (Rubisco), Phosphoenolpyruvate Carboxylase (PEP-Co) and carbonic anhydrase (CA). Therefore, we discuss a physiological/biochemical adaptation of these enzymes to affect the sink strength of vegetation for COS. We investigated the adaption of two European tree species, Fagus sylvatica and Quercus ilex, grown inside chambers under elevated CO2 and determined the exchange characteristics and the content of CA after a 1-2 yr period of adaption from 350 ppm to 800 ppm CO2. We could demonstrate that the COS compensation point, the CA activity and the deposition velocities may change and cause a decrease of the COS uptake by plant ecosystems. As a consequence, the atmospheric COS level may rise leading to higher input of this trace gas into the stratosphere and causing a higher energy reflection by the stratospheric sulfur aerosol into space, thus counteracting the direct radiative forcing by the tropospheric COS.

  5. The role of mosses in carbon uptake and partitioning in arctic vegetation.

    PubMed

    Street, Lorna E; Subke, Jens-Arne; Sommerkorn, Martin; Sloan, Victoria; Ducrotoy, Helene; Phoenix, Gareth K; Williams, Mathew

    2013-07-01

    The Arctic is already experiencing changes in plant community composition, so understanding the contribution of different vegetation components to carbon (C) cycling is essential in order to accurately quantify ecosystem C balance. Mosses contribute substantially to biomass, but their impact on carbon use efficiency (CUE) - the proportion of gross primary productivity (GPP) incorporated into growth - and aboveground versus belowground C partitioning is poorly known. We used (13) C pulse-labelling to trace assimilated C in mosses (Sphagnum sect. Acutifolia and Pleurozium schreberi) and in dwarf shrub-P. schreberi vegetation in sub-Arctic Finland. Based on (13) C pools and fluxes, we quantified the contribution of mosses to GPP, CUE and partitioning. Mosses incorporated 20 ± 9% of total ecosystem GPP into biomass. CUE of Sphagnum was 68-71%, that of P. schreberi was 62-81% and that of dwarf shrub-P. schreberi vegetation was 58-74%. Incorporation of C belowground was 10 ± 2% of GPP, while vascular plants alone incorporated 15 ± 4% of their fixed C belowground. We have demonstrated that mosses strongly influence C uptake and retention in Arctic dwarf shrub vegetation. They increase CUE, and the fraction of GPP partitioned aboveground. Arctic C models must include mosses to accurately represent ecosystem C dynamics.

  6. Organic and Inorganic Carbon in the Rio Tinto (Spain) Deep Subsurface System: a Possible Model for Subsurface Carbon and Lithoautotrophs on Mars.

    NASA Astrophysics Data System (ADS)

    Bonaccorsi, R.; Stoker, C. R.; MARTE Science Team

    2007-12-01

    The subsurface is the key environment for searching for life on planets lacking surface life. Subsurface ecosystems are of great relevance to astrobiology including the search for past/present life on Mars. Conditions on the Martian surface do not support biological activity but the subsurface might preserve organics and host subsurface life [1]. A key requirement for the analysis of subsurface samples on Mars is the ability to characterize organic vs. inorganic carbon pools. This information is needed to determine if the sample contains organic material of biological origin and/ or to establish if pools of inorganic carbon can support subsurface biospheres. The Mars Analog Rio Tinto Experiment (MARTE) performed deep drilling of cores i.e., down to 165-m depth, in a volcanically-hosted-massive-sulfide deposit at Rio Tinto, Spain, which is considered an important analog of the Sinus Meridiani site on Mars. Results from MARTE suggest the existence of a relatively complex subsurface life including aerobic and anaerobic chemoautotrophs, and strict anaerobic methanogens sustained by Fe and S minerals in anoxic conditions, which is an ideal model analog for a deep subsurface Martian environment. We report here on the distribution of organic (C-org: 0.01-0.3Wt% and inorganic carbon (IC = 0.01-7.0 Wt%) in a subsurface rock system including weathered/oxidized i.e., gossan, and unaltered pyrite stockwork. Cores were analyzed from 3 boreholes (BH-4, BH-7, and BH-8) that penetrated down to a depth of ~165 m into massive sulfide. Nearsurface phyllosilicate rich-pockets contain the highest amounts of organics (0.3Wt%) [2], while the deeper rocks contain the highest amount of carbonates. Assessing the amount of C pools available throughout the RT subsurface brings key insight on the type of trophic system sustaining its microbial ecosystem (i.e., heterotrophs vs. autotrophs) and the biogeochemical relationships that characterize a new type of subsurface biosphere at RT. This

  7. The relative influence of topography and land cover on inorganic and organic carbon exports from catchments in southern Quebec, Canada

    NASA Astrophysics Data System (ADS)

    Li, Mingfeng; Giorgio, Paul A.; Parkes, Alice H.; Prairie, Yves T.

    2015-12-01

    Export of carbon (C) from watersheds represents a key component of local and regional C budgets. We explored the magnitude, variability, and drivers of inorganic, organic, and total C exports from 83 temperate catchments in southern Québec, Canada. The average dissolved inorganic carbon (DIC), dissolved organic carbon (DOC), and total C (TC) exports from these catchments were 4.6, 5.1, and 10.2 g m-2 yr-1, respectively. Multiple regression models, using a combination of topographical variables (catchment area, shape, and slope), along with land cover variables (%vegetation, %wetland, %lake, and building density), explained 34%, 62%, and 53% of the variability in the DIC, DOC, and TC exports, respectively. Variance partitioning in the models revealed that topography is slightly more important than land cover in explaining the variance in DIC export (19% versus 15%), whereas land cover is much more important than topography in determining DOC export (44% versus 18%). Interestingly, %vegetation had a negative effect on DIC export but a positive effect on DOC export, suggesting that a change in land cover that reduces vegetation (e.g., deforestation) would lead to modest decreases in TC export but large increases in DIC/DOC export ratio. We conclude that topography and land cover together determine DIC, DOC, and TC exports. While topography is static, land cover can be altered, which will determine the quantity, form, and fate of C exported from these catchments. Finally, annual differences in export values that are related to temperature and precipitation suggest that climate change also have an impact on C export.

  8. An Isotope Dilution Method for High-frequency Measurements of Dissolved Inorganic Carbon concentration in the Surface Ocean

    NASA Astrophysics Data System (ADS)

    Huang, K.; Bender, M. L.; Wanninkhof, R. H.; Cassar, N.

    2013-12-01

    Dissolved inorganic carbon (DIC) is one of the most important species in the ocean carbon system. An autonomous system using isotope dilution as its core method has been developed to obtain high-frequency measurements of dissolved inorganic carbon (DIC) concentrations in the surface ocean. This system accurately mixes a seawater sample and a 13C-labeled sodium bicarbonate solution (spike). The mixed solution is then acidified and sent through a gas permeable membrane contactor. CO2 derived from DIC in the mixture is extracted by a CO2-free gas stream, and is sent to a cavity ring-down spectrometer to analyze its 13C/12C ratio. [DIC] of the seawater can then be derived from the measured 13C/12C, the known mixing ratio and the [DI13C] of the spike. The method has been tested under a wide [DIC] range (1800-2800 μmol/kg) in the laboratory. It has also been deployed on a cruise that surveyed ocean waters to the south of Florida. At a sampling resolution of 4 minutes (15 samples per hour), the relative standard deviation of DIC determined from the laboratory tests and the field deployment is ×0.07% and ×0.09%, respectively. The accuracy of the method is better than 0.1% except where [DIC] varies faster than 5 μmol/kg per minute. Based on the laboratory and field evaluations, we conclude that this method can provide accurate underway [DIC] measurements at high resolution in most oceanic regions. Schematic illustration of the work flow.

  9. A Restricted Boltzman Neural Net to Infer Carbon Uptake from OCO-2 Satellite Data

    NASA Astrophysics Data System (ADS)

    Halem, M.; Dorband, J. E.; Radov, A.; Barr-Dallas, M.; Gentine, P.

    2015-12-01

    For several decades, scientists have been using satellite observations to infer climate budgets of terrestrial carbon uptake employing inverse methods in conjunction with ecosystem models and coupled global climate models. This is an extremely important Big Data calculation today since the net annual photosynthetic carbon uptake changes annually over land and removes on average ~20% of the emissions from human contributions to atmospheric loading of CO2 from fossil fuels. Unfortunately, such calculations have large uncertainties validated with in-situ networks of measuring stations across the globe. One difficulty in using satellite data for these budget calculations is that the models need to assimilate surface fluxes of CO2 as well as soil moisture, vegatation cover and the eddy covariance of latent and sensible heat to calculate the carbon fixed in the soil while satellite spectral observations only provide near surface concentrations of CO2. In July 2014, NASA successfully launched OCO-2 which provides 3km surface measurements of CO2 over land and oceans. We have collected nearly one year of Level 2 XCO2 data from the OCO-2 satellite for 3 sites of ~200 km2 at equatorial, temperate and high latitudes. Each selected site was part of the Fluxnet or ARM system with tower stations for measuring and collecting CO2 fluxes on an hourly basis, in addition to eddy transports of the other parameters. We are also planning to acquire the 4km NDVI products from MODIS and registering the data to the 3km XCO2 footprints for the three sites. We have implemented a restricted Boltzman machine on the quantum annealing D-Wave computer, a novel deep learning neural net, to be used for training with station data to infer CO2 fluxes from collocated XCO2, MODIS vegetative land cover and MERRA reanalysis surface exchange products. We will present performance assessments of the D-Wave Boltzman machine for generating XCO2 fluxes from the OCO-2 satellite observations for the 3 sites by

  10. Flow-injection analysis for the determination of total inorganic carbon and total organic carbon in water using the H2O2-luminol-uranine chemiluminescent reaction.

    PubMed

    Fan, Shun-Li; Qu, Fang; Zhao, Lixia; Lin, Jin-Ming

    2006-12-01

    In the presence of carbonate and uranine, the chemiluminescent intensity from the reaction of luminol with hydrogen peroxide was dramatically enhanced in a basic medium. Based on this fact and coupled with the technique of flow-injection analysis, a highly sensitive method was developed for the determination of carbonate with a wide linear range. The method provided the determination of carbonate with a wide linear range of 1.0 x 10(-10)-5.0 x 10(-6) mol L(-1) and a low detection limit (S/N = 3) of carbonate of 1.2 x 10(-11) mol L(-1). The average relative standard deviation for 1.0 x 10(-9)-9.0 x 10(-7) mol L(-1) of carbonate was 3.7% (n = 11). Combined with the wet oxidation of potassium persulfate, the method was applied to the simultaneous determination of total inorganic carbon (TIC) and total organic carbon (TOC) in water. The linear ranges for TIC and TOC were 1.2 x 10(-6)-6.0 x 10(-2) mg L(-1) and 0.08-30 mg L(-1) carbon, respectively. Recoveries of 97.4-106.4% for TIC and 96.0-98.5% for TOC were obtained by adding 5 or 50 mg L(-1) of carbon to the water samples. The relative standard deviations (RSDs) were 2.6-4.8% for TIC and 4.6-6.6% for TOC (n = 5). The mechanism of the chemiluminescent reaction was also explored and a reasonable explanation about chemical energy transfer from luminol to uranine was proposed.

  11. Response of organic and inorganic carbon and nitrogen to long-term grazing of the shortgrass steppe.

    PubMed

    Reeder, Jean D; Schuman, Gerald E; Morgan, Jack A; Lecain, Daniel R

    2004-04-01

    We investigated the influence of long-term (56 years) grazing on organic and inorganic carbon (C) and nitrogen (N) contents of the plant-soil system (to 90 cm depth) in shortgrass steppe of northeastern Colorado. Grazing treatments included continuous season-long (May-October) grazing by yearling heifers at heavy (60-75% utilization) and light (20-35% utilization) stocking rates, and nongrazed exclosures. The heavy stocking rate resulted in a plant community that was dominated (75% of biomass production) by the C4 grass blue grama (Bouteloua gracilis), whereas excluding livestock grazing increased the production of C3 grasses and prickly pear cactus (Opuntia polycantha). Soil organic C (SOC) and organic N were not significantly different between the light grazing and nongrazed treatments, whereas the heavy grazing treatment was 7.5 Mg ha(-1) higher in SOC than the nongrazed treatment. Lower ratios of net mineralized N to total organic N in both grazed compared to nongrazed treatments suggest that long-term grazing decreased the readily mineralizable fraction of soil organic matter. Heavy grazing affected soil inorganic C (SIC) more than the SOC. The heavy grazing treatment was 23.8 Mg ha(-1) higher in total soil C (0-90 cm) than the nongrazed treatment, with 68% (16.3 Mg ha(-1)) attributable to higher SIC, and 32% (7.5 Mg ha(-1)) to higher SOC. These results emphasize the importance in semiarid and arid ecosystems of including inorganic C in assessments of the mass and distribution of plant-soil C and in evaluations of the impacts of grazing management on C sequestration.

  12. Elucidating carbon uptake from vinyl chloride using stable isotope probing and Illumina sequencing.

    PubMed

    Paes, Fernanda; Liu, Xikun; Mattes, Timothy E; Cupples, Alison M

    2015-09-01

    Vinyl chloride (VC), a known human carcinogen, is a common and persistent groundwater pollutant at many chlorinated solvent contaminated sites. The remediation of such sites is challenging because of the lack of knowledge on the microorganisms responsible for in situ VC degradation. To address this, the microorganisms involved in carbon assimilation from VC were investigated in a culture enriched from contaminated site groundwater using stable isotope probing (SIP) and high-throughput sequencing. The mixed culture was added to aerobic media, and these were amended with labeled ((13)C-VC) or unlabeled VC ((12)C-VC). The cultures were sacrificed on days 15, 32, and 45 for DNA extraction. DNA extracts and SIP ultracentrifugation fractions were subject to sequencing as well as quantitative PCR (qPCR) for a functional gene linked to VC-assimilation (etnE). The gene etnE encodes for epoxyalkane coenzyme M transferase, a critical enzyme in the pathway for VC degradation. The relative abundance of phylotypes was compared across ultracentrifugation fractions obtained from the (13)C-VC- and (12)C-VC-amended cultures. Four phylotypes were more abundant in the heavy fractions (those of greater buoyant density) from the (13)C-VC-amended cultures compared to those from the (12)C-VC-amended cultures, including Nocardioides, Brevundimonas, Tissierella, and Rhodoferax. Therefore, both a previously identified VC-assimilating genus (Nocardioides) and novel microorganisms were responsible for carbon uptake. Enrichment of etnE with time was observed in the heavy fractions, and etnE sequences illustrated that VC-assimilators harbor similar Nocardioides-like etnE. This research provides novel data on the microorganisms able to assimilate carbon from VC.

  13. Comparative Metabolism of Carbon Tetrachloride in Rats, Mice and Hamsters Using Gas Uptake and PBPK Modeling

    SciTech Connect

    Thrall, Karla D. ); Vucelick, Mark E.; Gies, Richard A. ); Zangar, Richard C. ); Weitz, Karl K. ); Poet, Torka S. ); Springer, David L. ); Grant, Donna M. ); Benson, Janet M.

    2000-08-25

    No study has comprehensively compared the rate of metabolism of carbon tetrachloride (CCl4) across species. Therefore, the in vivo metabolism of CCl4 was evaluated using groups of male animals (F344 rats, B6C3F1 mice, and Syrian hamsters) exposed to 40-1800 ppm CCl4 in a closed, recirculating gas-uptake system. For each species, an optimal fit of the family of uptake curves was obtained by adjusting Michaelis-Menten metabolic constants Km (affinity) and Vmax (capacity) using a physiologically based pharmacokinetic (PBPK) model. The results show that the mouse has a slightly higher capacity and lower affinity for metabolizing CCl4 compared to the rat, while the hamster has a higher capacity and lower affinity than either rat or mouse. A comparison of the Vmax to Km ratio, normalized for mg of liver protein (L/hr/mg) across species indicates that hamsters metabolize more CCl4 than either rats or mice, and should be more susceptible to CCl4-induced hepatotoxicity. These species comparisons were evaluated against toxicokinetic studies conducted in animals exposed by nose-only inhalation to 20 ppm 14C-labeled CCl4 for 4 hours. The toxicokinetic study results are consistent with the in vivo rates of metabolism, with rats eliminating less radioactivity associated with metabolism (14CO2 and urine/feces) and more radioactivity associated with the parent compound (radioactivity trapped on charcoal) compared to either hamsters or mice. The in vivo metabolic constants determined here, together with in vitro constants determined using rat, mouse, hamster and human liver microsomes, were used to estimate human in vivo metabolic rates of 1.49 mg/hr/kg body weight and 0.25 mg/L for Vmax and Km, respectively. Normalizing the rate of metabolism (Vmax/Km) by mg liver protein, the rate of metabolism of CCl4 differs across species, with hamster > mouse& > rat > human.

  14. In vivo uptake of carbon-14-colchicine for identification of tumor multidrug resistance

    SciTech Connect

    Mehta, B.M.; Rosa, E.; Biedler, J.L.

    1994-07-01

    A major limitation in the treatment of cancer with natural product chemotherapeutic agents is the development of multidrug resistance (MDR). Multidrug resistance is attributed to enhanced expression of the multidrug resistance gene MDR1. Colchicine (CHC) is known to be one of the MDR drugs. The authors have previously demonstrated that it is possible to distinguish multidrug resistant tumors from the multidrug-sensitive tumors in vivo on the basis of tritium ({sup 3}H) uptake following injection of {sup 3}H-CHC. The present studies were carried out in xenografted animals using {sup 14}C-CHC which may be more indicative of {sup 11}C-labeled CHC distribution with regard to circulating metabolites, since metabolic processes following injection of (ring C, methoxy-{sup 11}C)-CHC may produce significant amounts of circulating 1l-carbon fragments (i.e., methanol and/or formaldehyde). Experiments were carried out at a dose of 2 mg/kg. Activity concentration per injected dose was approximately twice as great in sensitive as in resistant tumors (p < 0.05) at 60 min following intravenous injection of {sup 14}C-CHC. About 75% of total activity was CHC in the sensitive tumors. The findings are further confirmed by the quantitative autoradiographic evaluation of resistant and sensitive tumors. These studies confirm our previous observations that it is possible to noninvasively distinguish multidrug-resistant tumors from sensitive tumors in vivo based on uptake of an injected MDR drug using a{sup 14}C-labeled CHC at the same position and of comparable specific activity to a {sup 11}C-CHC tracer used for PET imaging. 16 refs., 5 figs., 2 tabs.

  15. Uptake and cytotoxic effects of multi-walled carbon nanotubes in human bronchial epithelial cells

    SciTech Connect

    Hirano, Seishiro; Fujitani, Yuji; Furuyama, Akiko; Kanno, Sanae

    2010-11-15

    Carbon nanotubes (CNT) are cytotoxic to several cell types. However, the mechanism of CNT toxicity has not been fully studied, and dosimetric analyses of CNT in the cell culture system are lacking. Here, we describe a novel, high throughput method to measure cellular uptake of CNT using turbimetry. BEAS-2B, a human bronchial epithelial cell line, was used to investigate cellular uptake, cytotoxicity, and inflammatory effects of multi-walled CNT (MWCNT). The cytotoxicity of MWCNT was higher than that of crocidolite asbestos in BEAS-2B cells. The IC{sub 50} of MWCNT was 12 {mu}g/ml, whereas that of asbestos (crocidolite) was 678 {mu}g/ml. Over the course of 5 to 8 h, BEAS-2B cells took up 17-18% of the MWCNT when they were added to the culture medium at a concentration of 10 {mu}g/ml. BEAS-2B cells were exposed to 2, 5, or 10 {mu}g/ml of MWCNT, and total RNA was extracted for cytokine cDNA primer array assays. The culture supernatant was collected for cytokine antibody array assays. Cytokines IL-6 and IL-8 increased in a dose dependent manner at both the mRNA and protein levels. Migration inhibitory factor (MIF) also increased in the culture supernatant in response to MWCNT. A phosphokinase array study using lysates from BEAS-2B cells exposed to MWCNT indicated that phosphorylation of p38, ERK1, and HSP27 increased significantly in response to MWCNT. Results from a reporter gene assays using the NF-{kappa}B or AP-1 promoter linked to the luciferase gene in transiently transfected CHO-KI cells revealed that NF-{kappa}B was activated following MWCNT exposure, while AP-1 was not changed. Collectively, MWCNT activated NF-{kappa}B, enhanced phosphorylation of MAP kinase pathway components, and increased production of proinflammatory cytokines in human bronchial epithelial cells.

  16. Kinetic analysis of the uptake of glucose and corn oil used as carbon sources in batch cultures of Gibberella fujikuroi.

    PubMed

    Rios-Iribe, Erika Y; Hernández-Calderón, Oscar M; Escamilla-Silva, Eleazar M

    2016-11-01

    This study determined the specific uptake rate of glucose and corn oil substrates used as carbon sources in batch cultures of Gibberella fujikuroi. We tested three biological models of growth rate: Monod, logistic and lag-exponential. With respect to the substrate consumption rate, we tested two models: constant cell yield (CCY) and law of mass action (LMA). The experimental data obtained from the culture with glucose as substrate correlated satisfactorily with the logistic/LMA model, indicating that the cell yield was variable. In the case of corn oil as carbon source, considering total residual lipids as substrate in the culture broth, the model with the best correlation was the lag-exp/CCY model. The quantification by GC of the three main fatty acids (linoleic, oleic and palmitic) in the culture medium showed a cumulative behavior, with a maximum concentration of each acid at 36 h. We established a more explicit mechanism of the consumption of corn oil, consisting of two stages: generation of fatty acids by hydrolysis and consumption by cellular uptake. The kinetic of hydrolysable lipids was of first order. We found that the hydrolysis rate of corn oil is not a limiting factor for the uptake of fatty acids by the microorganism. We also established, based on the analysis of the identical mathematical structure of consumption kinetics, that the uptake of fatty acids is faster than the uptake of glucose.

  17. Kinetic analysis of the uptake of glucose and corn oil used as carbon sources in batch cultures of Gibberella fujikuroi.

    PubMed

    Rios-Iribe, Erika Y; Hernández-Calderón, Oscar M; Escamilla-Silva, Eleazar M

    2016-11-01

    This study determined the specific uptake rate of glucose and corn oil substrates used as carbon sources in batch cultures of Gibberella fujikuroi. We tested three biological models of growth rate: Monod, logistic and lag-exponential. With respect to the substrate consumption rate, we tested two models: constant cell yield (CCY) and law of mass action (LMA). The experimental data obtained from the culture with glucose as substrate correlated satisfactorily with the logistic/LMA model, indicating that the cell yield was variable. In the case of corn oil as carbon source, considering total residual lipids as substrate in the culture broth, the model with the best correlation was the lag-exp/CCY model. The quantification by GC of the three main fatty acids (linoleic, oleic and palmitic) in the culture medium showed a cumulative behavior, with a maximum concentration of each acid at 36 h. We established a more explicit mechanism of the consumption of corn oil, consisting of two stages: generation of fatty acids by hydrolysis and consumption by cellular uptake. The kinetic of hydrolysable lipids was of first order. We found that the hydrolysis rate of corn oil is not a limiting factor for the uptake of fatty acids by the microorganism. We also established, based on the analysis of the identical mathematical structure of consumption kinetics, that the uptake of fatty acids is faster than the uptake of glucose. PMID:27646209

  18. Nature of the carbon and sulfur phases and inorganic gases in the Kenna ureilite

    NASA Technical Reports Server (NTRS)

    Gibson, E. K., Jr.

    1976-01-01

    Abundances of carbon and sulfur in the Kenna ureilite are 2.219 plus or minus 0.060 wt. % C and 0.179 plus or minus 0.008 wt. % S. Secondary carbonates resulting from terrestrial weathering account for 0.25 plus or minus 0.02 wt. % C. No hydrocarbons were detected during gas release measurements. Most of the carbon is in graphite, diamond, or lonsdaleite. The sample of Kenna contained 0.95 plus or minus 0.05 wt.% H2O. Total carbon and sulfur measurements were made on three additional ureilites: Havero, Dingo Pup Donga, and North Haig. Ureilite carbon abundances are similar to those of C-2 chondrites, whereas sulfur abundances are a factor of 10 less than C-2 chondrites and ordinary chondrites. The elemental abundances, ratios, and phases present in the ureilites rule out a direct genetic relationship between the ureilites and the carbonaceous chondrites.

  19. Dynamics of Dissolved Inorganic Carbon in the Waterways of Antropogenically Influenced Closed Semi-Arid Basins

    NASA Astrophysics Data System (ADS)

    Jameel, M. Y.; Bowen, G. J.

    2014-12-01

    Inland aquatic carbon cycling is an important component of global carbon cycle and recent work has shown that anthropogenic activities can significantly alter the flux of terrestrial carbon through these systems to oceans and lakes. The study of dissolved carbon species in rivers provides detailed information about the natural and anthropogenic processing of carbon within a watershed. We measured water chemistry and stable isotope ratios (δ13C, δ18O, δ2H) of three major rivers (Bear, Jordan and Weber) seasonally, within the Great Salt Lake Basin to understand sources and processes governing the carbon cycling within the basin. Our preliminary data suggest strong correlation between the DIC concentration and land use/land cover for all the three waterways, with DIC increasing as the rivers flow through agricultural and urban regions. We also observed significant decrease in the DIC with the addition of fresh water from the tributaries which was most significant during the spring sampling. All the three rivers are super saturated in dissolved CO2 with respected to the atmospheric CO2 concentration, with pCO2 ranging from 1-5 times the atmospheric value and also showing strong seasonal variations. Coupling the pCO2 data with the isotopic value and concentration of DIC suggests that the variations within and among the rivers are manifestation of the different sources of DIC, further altered by in-situ processes such as organic respiration and photosynthesis. Our result suggest that human induced changes in land use and land cover have significantly altered the carbon budget of waterways of the Great Salt Lake Basin and carbon flux to the Great Salt Lake itself. Our future work will further quantify these changes, increasing our understanding of past, present and future changes in carbon cycling in closed semi-arid basins, and its importance in the global carbon cycle.

  20. Use of pore-water composition to reconstruct past dissolved inorganic carbon concentration and alkalinity in Pacific bottom water

    NASA Astrophysics Data System (ADS)

    Sauvage, J. F.; Spivack, A. J.; D'Hondt, S. L.; Integrated Ocean Drilling Program Expedition 329 shipboard scientific party

    2011-12-01

    The carbonate system is a crucial component in controlling the pH of the world's oceans and the distribution of CO2 within the ocean, as well as between the ocean and atmosphere. Consequently, dissolved inorganic carbon (DIC) and alkalinity reconstructions bear lots of promise for improving understanding of the ocean's role in the global carbon cycle and climate. We propose and test a method to quantify in situ concentrations of deep-sea carbonate-system components (DIC, alkalinity, CO32-, Ca2+, and minor component concentrations) in pore fluid of deep-sea sediment cores. These concentrations can in turn be used to reconstruct deep-sea carbonate-system chemistry of the geologic past. Alkalinity, DIC and Ca2+ concentrations measured on research vessels differ from in situ values because temperature and pressure changes during core recovery, storage and extraction induce calcium carbonate precipitation and in this way alter the original composition. To reconstruct in situ values, we developed a method that takes advantage of the mathematically over-determined state of the system if three components are measured, given that CaCO3 is saturated and the dissolved carbonate system is at equilibrium in situ. As a result, based on the measured alkalinity, DIC and Ca2+ concentrations, in situ CO2aq, HCO3-, CO32-, and minor species concentrations are calculated by applying an iteration process. This approach allows us to calculate the amount of CaCO3 precipitated during sediment recovery from the seafloor, and hence in situ carbonate system components. We apply our model to pore-water data from two SPG sites rich in calcium carbonate and drilled by Integrated Ocean Drilling Program Expedition 329 (Sites 1367 and 1368). We compared two sample types for this study, (i) samples squeezed and processed within minutes of recovery (rapidly processed) and (ii) samples processed in the following hours/days, and as consequence prone to some substantial alteration (slowly processed

  1. Interactions of carbon nanotubes with aqueous/aquatic media containing organic/inorganic contaminants and selected organisms of aquatic ecosystems--A review.

    PubMed

    Boncel, Sławomir; Kyzioł-Komosińska, Joanna; Krzyżewska, Iwona; Czupioł, Justyna

    2015-10-01

    Due to their unique molecular architecture translating into numerous every-day applications, carbon nanotubes (CNTs) will be ultimately an increasingly significant environmental contaminant. This work reviews qualitative/quantitative analyses of interactions of various types of CNTs and their chemically modified analogues with aqueous/aquatic media containing organic and inorganic contaminants and selected organisms of aquatic ecosystems. A special emphasis was placed on physicochemical interactions between CNTs as adsorbents of heavy metal cations and aromatic compounds (dyes) with its environmental consequences. The studies revealed CNTs as more powerful adsorbents of aromatic compounds (an order of magnitude higher adsorption capacity) than metal cations. Depending on the presence of natural organic matter (NOM) and/or co-contaminants, CNTs may act as Trojan horse while passing through biological membranes (in the absence of NOM coordinating metal ions). Nanotubes, depending on flow conditions and their morphology/surface chemistry, may travel with natural waters or sediment with immobilized PAHs or metals and/or increase cyto- and ecotoxicity of PAHs/metal ions by their release via competitive complexation, or cause synergic ecotoxicity while adsorbing nutrients. Additionally, toxicity of CNTs against exemplary aquatic microorganisms was reviewed. It was found for Daphnia magna that longer exposures to CNTs led to higher ecotoxicity with a prolonged CNTs excretion. SWCNTs were more toxic than MWCNTs, while hydrophilization of CNTs via oxidation or anchoring thereto polar/positively charged polymer chains enhanced stability of nanotubes dispersion in aqueous media. On the other hand, bioavailability of functionalized CNTs was improved leading to more complex both mechanisms of uptake and cytotoxic effects.

  2. Tailoring the Pore Environment of Metal-Organic and Molecular Materials Decorated with Inorganic Anions: Platforms for Highly Selective Carbon Capture

    NASA Astrophysics Data System (ADS)

    Nugent, Patrick S.

    Due to their high surface areas and structural tunability, porous metal-organic materials, MOMs, have attracted wide research interest in areas such as carbon capture, as the judicious choice of molecular building block (MBB) and linker facilitates the design of MOMs with myriad topologies and allows for a systematic variation of the pore environment. Families of MOMs with modular components, i.e. MOM platforms, are eminently suitable for targeting the selective adsorption of guest molecules such as CO2 because their pore size and pore functionality can each be tailored independently. MOMs with saturated metal centers (SMCs) that promote strong yet reversible CO2 binding in conjunction with favorable adsorption kinetics are an attractive alternative to MOMs containing unsaturated metal centers (UMCs) or amines. Whereas MOMs with SMCs and exclusively organic linkers typically have poor CO2 selectivity, it has been shown that a versatile, long known platform with SMCs, pillared square grids with inorganic anion pillars and pcu topology, exhibits high and selective CO 2 uptake, a moderate CO2 binding affinity, and good stability under practical conditions. As detailed herein, the tuning of pore size and pore functionality in this platform has modulated the CO2 adsorption properties and revealed variants with unprecedented selectivity towards CO 2 under industrially relevant conditions, even in the presence of moisture. With the aim of tuning pore chemistry while preserving pore size, we initially explored the effect of pillar substitution upon the carbon capture properties of a pillared square grid, [Cu(bipy)2(SiF6)] (SIFSIX-1-Cu). Room temperature CO2, CH4, and N 2 adsorption isotherms revealed that substitution of the SiF6 2- ("SIFSIX") inorganic pillar with TiF6 2- ("TIFSIX") or SnF62- ("SNIFSIX") modulated CO2 uptake, CO2 affinity (heat of adsorption, Qst), and selectivity vs. CH4 and N2. TIFSIX-1-Cu and SNIFSIX-1-Cu were calculated to exhibit the highest CO2/N 2

  3. Competitive inhibition and selectivity enhancement by Ca in the uptake of inorganic elements (Be, Na, Mg, K, Ca, Sc, Mn, Co, Zn, Se, Rb, Sr, Y, Zr, Ce, Pm, Gd, Hf) by carrot (Daucus carota cv. U.S. harumakigosun).

    PubMed

    Ozaki, Takuo; Ambe, Shizuko; Abe, Tomoko; Francis, Arokiasamy J

    2005-01-01

    We investigated the uptake of inorganic elements (Be, Na, Mg, K, Ca, Sc, Mn, Co, Zn, Se, Rb, Sr, Y, Zr, Ce, Pm, Gd, and Hf) and the effect of Ca on their uptake in carrots (Daucus carota cv. U.S. harumakigosun) by the radioactive multitracer technique. The experimental results suggested that Na, Mg, K, and Rb competed for the functional groups outside the cells in roots with Ca but not for the transporter-binding sites on the plasma membrane of the root cortex cells. In contrast, Y, Ce, Pm, and Gd competed with Ca for the transporters on the plasma membrane. The selectivity, which was defined as the value obtained by dividing the concentration ratio of an elemental pair, K/Na, Rb/Na, Be/Sr, and Mg/Sr, in the presence of 0.2 and 2 ppm Ca by that of the corresponding elemental pair in the absence of Ca in the solution was estimated. The selectivity of K and Rb in roots was increased in the presence of Ca. The selectivity of Be in roots was not affected, whereas the selectivity of Mg was increased by Ca. These observations suggest that the presence of Ca in the uptake solution enhances the selectivity in the uptake of metabolically important elements against unwanted elements. PMID:15695849

  4. [Hydrochemical Characteristics and the Dissolved Inorganic Carbon Flux in Liuzhou Section of Liujiang Basin].

    PubMed

    Yuan, Ya-qiong; He, Shi-yi; Yu, Shi; Sun, Ping-an; Wang, Yan-xue; Wu, Zhao-yun; Li, Xin-gui; Xie, Ming-xian; Liu, Wen; Li, Rui; Zhang, Hua-sheng

    2015-07-01

    An important aspect of the current global change research is using river chemical composition to reveal the chemical weathering process and its effect of carbon sink. In this study, water samples were collected and analyzed 2 ~3 times per month from January to December in 2013. The hydrochemistry belonged to HCO3-Ca type. Ca+ and HCO3- were the main cation and anion, which reflected that the hydrochemical characteristics of river were mainly affected by the dissolution of carbonate rock. The concentration of main ions varied with the seasons, which reflected that the crest value occurred in winter, followed by those in autumn and spring, and the lowest value was observed in summer. Due to the interaction of effect of dilution and effect of C2, the seasonal variation of Ca2+ and HCO3- showed that the highest value was in autumn and the lowest value was in summer. The seasonal variation law of other ions should be attributed to the effect of dilution or agricultural activities or combined action of them. Both carbonic acid and sulfuric acid took part in the chemical weathering of carbonate rocks as evidenced by stoichiometric analysis. Besides, the δ34S of sulfate ion of the river waters (δ34S: from 7. 65 per thousand to 8. 55 per thousand) showed that SO2- was originated mainly from oxidation of sulfide minerals in ore deposits and acid rain. Chemical mass balance method was applied to estimate the proportion of HCO- coming from carbonate weathering by sulfuric acid. The result was 28. 26% . On this basis, the total carbon flux of carbon ( by CO2 calculation) in Liuzhou section calculated month by month was about 8. 95 x 10(5) t . a-1. What's more, the carbon flux showed a positive correlation with flow, which implied that the discharge of catchment was the main influencing factor of carbon flux rather than the HCO3- concentration. PMID:26489309

  5. [Hydrochemical Characteristics and the Dissolved Inorganic Carbon Flux in Liuzhou Section of Liujiang Basin].

    PubMed

    Yuan, Ya-qiong; He, Shi-yi; Yu, Shi; Sun, Ping-an; Wang, Yan-xue; Wu, Zhao-yun; Li, Xin-gui; Xie, Ming-xian; Liu, Wen; Li, Rui; Zhang, Hua-sheng

    2015-07-01

    An important aspect of the current global change research is using river chemical composition to reveal the chemical weathering process and its effect of carbon sink. In this study, water samples were collected and analyzed 2 ~3 times per month from January to December in 2013. The hydrochemistry belonged to HCO3-Ca type. Ca+ and HCO3- were the main cation and anion, which reflected that the hydrochemical characteristics of river were mainly affected by the dissolution of carbonate rock. The concentration of main ions varied with the seasons, which reflected that the crest value occurred in winter, followed by those in autumn and spring, and the lowest value was observed in summer. Due to the interaction of effect of dilution and effect of C2, the seasonal variation of Ca2+ and HCO3- showed that the highest value was in autumn and the lowest value was in summer. The seasonal variation law of other ions should be attributed to the effect of dilution or agricultural activities or combined action of them. Both carbonic acid and sulfuric acid took part in the chemical weathering of carbonate rocks as evidenced by stoichiometric analysis. Besides, the δ34S of sulfate ion of the river waters (δ34S: from 7. 65 per thousand to 8. 55 per thousand) showed that SO2- was originated mainly from oxidation of sulfide minerals in ore deposits and acid rain. Chemical mass balance method was applied to estimate the proportion of HCO- coming from carbonate weathering by sulfuric acid. The result was 28. 26% . On this basis, the total carbon flux of carbon ( by CO2 calculation) in Liuzhou section calculated month by month was about 8. 95 x 10(5) t . a-1. What's more, the carbon flux showed a positive correlation with flow, which implied that the discharge of catchment was the main influencing factor of carbon flux rather than the HCO3- concentration.

  6. Temporal dynamics of groundwater-dissolved inorganic carbon beneath a drought-affected braided stream: Platte River case study

    NASA Astrophysics Data System (ADS)

    Boerner, Audrey R.; Gates, John B.

    2015-05-01

    Impacts of environmental changes on groundwater carbon cycling are poorly understood despite their potentially high relevance to terrestrial carbon budgets. This study focuses on streambed groundwater chemistry during a period of drought-induced river drying and consequent disconnection between surface water and groundwater. Shallow groundwater underlying vegetated and bare portions of a braided streambed in the Platte River (Nebraska, USA) was monitored during drought conditions in summer 2012. Water temperature and dissolved inorganic carbon (dominated by HCO3-) in streambed groundwater were correlated over a 3 month period coinciding with a decline in river discharge from 35 to 0 m3 s-1. Physical, chemical, and isotopic parameters were monitored to investigate mechanisms affecting the HCO3- trend. Equilibrium thermodynamic modeling suggests that an increase of pCO2 near the water table, coupled with carbonate mineral weathering, can explain the trend. Stronger temporal trends in Ca2+ and Mg2+ compared to Cl- are consistent with carbonate mineral reequilibria rather than evaporative concentration as the primary mechanism of the increased HCO3-. Stable isotope trends are not apparent, providing further evidence of thermodynamic controls rather than evaporation from the water table. A combination of increased temperature and O2 in the dewatered portion of the streambed is the most likely driver of increased pCO2 near the water table. Results of this study highlight potential linkages between surface environmental changes and groundwater chemistry and underscore the need for high-resolution chemical monitoring of alluvial groundwater in order to identify environmental change impacts.

  7. Acclimation of Photosynthetic Light Reactions during Induction of Inorganic Carbon Accumulation in the Green Alga Chlamydomonas reinhardtii12

    PubMed Central

    Palmqvist, Kristin; Sundblad, Lars-Göran; Wingsle, Gunnar; Samuelsson, Göran

    1990-01-01

    Cells of the unicellular green algae Chlamydomonas reinhardtii were grown in high dissolved inorganic carbon (DIC) concentrations (supplied with 50 milliliters per liter CO2[g]) and transferred to low DIC concentrations (supplied with ≤ 100 microliters per liter CO2[g]). Immediately after transfer from high to low DIC the emission of photosystem II related chlorophyll a fluorescence was substantially quenched. It is hypothesized that the suddenly induced inorganic carbon limitation of photosynthesis resulted in a phosphorylation of LHCII, leading to the subsequent state 1 to state 2 transition. After 2 hours of low-DIC acclimation, 77 K fluorescence measurements revealed an increase in the fluorescence emitted from photosystem I, due to direct excitation, suggesting a change in photosystem II/photosystem I stoichiometry or an increased light harvesting capacity of photosystem I. After 5 to 6 hours of acclimation a considerable increase in spillover from photosystem II to photosystem I was observed. These adjustments of the photosynthetic light reactions reached steady-state after about 12 hours of low DIC treatment. The quencher of fluorescence could be removed by 5 minutes of dark treatment followed by 5 minutes of weak light treatment, of any of four different light qualities. It is hypothesized that this restoration of fluorescence was due to a state 2 to state 1 transition in low-DIC acclimated cells. A decreased ratio of violaxanthin to zeaxanthin was also observed in 12 hour low DIC treated cells, compared with high DIC grown cells. This ratio was not coupled to the level of fluorescence quenching. The role of different processes during the induction of a DIC accumulating mechanism is discussed. PMID:16667710

  8. How significant is submarine groundwater discharge and its associated dissolved inorganic carbon in a river-dominated shelf system?

    NASA Astrophysics Data System (ADS)

    Liu, Q.; Dai, M.; Chen, W.; Huh, C.-A.; Wang, G.; Li, Q.; Charette, M. A.

    2012-05-01

    In order to assess the role of submarine groundwater discharge (SGD) and its impact on the carbonate system on the northern South China Sea (NSCS) shelf, we measured seawater concentrations of four radium isotopes 223,224,226,228Ra along with carbonate system parameters in June-July, 2008. Complementary groundwater sampling was conducted in coastal areas in December 2008 and October 2010 to constrain the groundwater end-members. The distribution of Ra isotopes in the NSCS was largely controlled by the Pearl River plume and coastal upwelling. Long-lived Ra isotopes (228Ra and 226Ra) were enriched in the river plume but low in the offshore surface water and subsurface water/upwelling zone. In contrast, short-lived Ra isotopes (224Ra and 223Ra) were elevated in the subsurface water/upwelling zone as well as in the river plume but depleted in the offshore surface water. In order to quantify SGD, we adopted two independent mathematical approaches. Using a three end-member mixing model with total alkalinity (TAlk) and Ra isotopes, we derived a SGD flux into the NSCS shelf of 2.3-3.7 × 108 m3 day-1. Our second approach involved a simple mass balance of 228Ra and 226Ra and resulted in a first order but consistent SGD flux estimate of 2.2-3.7 × 108 m3 day-1. These fluxes were equivalent to 12-21 % of the Pearl River discharge, but the source of the SGD was mostly recirculated seawater. Despite the relatively small SGD volume flow compared to the river, the associated material fluxes were substantial given their elevated concentrations of dissolved inorganic solutes. In this case, dissolved inorganic carbon (DIC) flux through SGD was 153-347 × 109 mol yr-1, or ~23-53 % of the riverine DIC export flux. Our estimates of the groundwater-derived phosphate flux ranged 3-68 × 107 mol yr-1, which may be responsible for new production on the shelf up to 0.3-6.3 mmol C m-2 d-1. This rate of new production would at most consume 11 % of the DIC contribution delivered by SGD. Hence

  9. Differences in carbon uptake and water use between managed and unmanaged European beech forests

    NASA Astrophysics Data System (ADS)

    Herbst, M.; Mund, M.; Knohl, A.

    2013-12-01

    Based on 23 site-years of eddy covariance measurements made above a managed beech forest and a nearby unmanaged, old-growth forest in central Germany, a comparative analysis of the carbon and energy fluxes of the two forests was carried out. Both forests are located at similar altitude and they face similar meteorological conditions. They are also similar with respect to canopy height (37 m) and mean tree age (120 years). The managed beech forest is a monospecific, even-aged stand with species-rich ground vegetation and a leaf area index of about 4, whereas the old-growth forest is beech-dominated but interspersed with ash and sycamore trees. It has a multi-layer canopy consisting of trees of various ages ranging from 0 to 260 years and its leaf area index is about 5. On average the two forests did not differ significantly in annual net carbon uptake (508 and 483 g C m-2 a-1 for the managed and the unmanaged forest, respectively), however the managed forest showed a much larger interannual variability in gross primary production than the unmanaged forest did. This trend agreed well with independent dendrometric measurements made in both forests. In contrast, ecosystem respiration did neither vary significantly between the two forests nor between different years. The total annual evapotranspiration was slightly higher at the unmanaged forest site (549 mm a-1 compared to 504 mm a-1 at the managed site), which was probably due to a higher interception loss from the denser canopy in the unmanaged forest. We discuss whether the conclusion can be drawn from this case study that common forest management activities improve the water use efficiency of European beech forests but make them more vulnerable against extreme meteorological conditions such as, for example, summer heat waves or late frosts in spring.

  10. Sediment-water fluxes of dissolved inorganic carbon, O2,nutrients, and N2 from the hypoxic region of the Louisianacontinental shelf

    EPA Science Inventory

    Sediment fluxes of dissolved inorganic carbon (DIC), O2, nutrients, and N2 (denitrification) were measured on the Louisiana Continental Shelf during six cruises from 2005 to 2007. On each cruise, three to seven stations were occupied in regions of the shelf that experience summer...

  11. Clumped isotope disequilibrium during rapid CO2 uptake and carbonate precipitation in subaerial alkaline springs associated with ongoing serpentinization

    NASA Astrophysics Data System (ADS)

    Falk, E. S.; Guo, W.; Kelemen, P. B.

    2014-12-01

    Ongoing serpentinization in tectonically exposed ultramafic bodies is manifested at the surface in alkaline springs (pH >11). Where these high-pH waters come in contact with CO2 at the surface, rapid calcite precipitation forms extensive travertines. We study natural travertine samples from Oman and synthetic witherite (BaCO3) from high-pH experiments to identify disequilibrium signals in δ18O, δ13C and clumped isotopes (measured as Δ47) that characterize rapid uptake of atmospheric CO2 and carbonate precipitation from high pH fluids. Kinetic effects preclude the use of clumped or oxygen isotopes for carbonate thermometry in these environments, but trends in δ18O, δ13C and Δ47 could help identify extinct alkaline systems or distinguish CO2 sources. Oman travertines formed at peridotite-hosted alkaline springs have long been known to exhibit a large range of kinetically depleted δ18O and δ13C values. We find fresh carbonate precipitated at these alkaline springs also exhibit large enrichments in Δ47 that covary with the depletions in δ18O and δ13C, thought to arise during hydroxylation of CO2 in high-pH fluids. Witherite precipitated during rapid CO2 uptake and carbonate precipitation in high pH experiments also exhibits disequilibrium values in δ18O, δ13C and Δ47, with the Δ47 of carbonate precipitates strongly affected by the Δ47 the reactant CO2. δ18O, δ13C and Δ47 trends could serve as a marker for carbonates formed in subaerial alkaline environments and track carbon sources in these systems. For example, the δ18O-δ13C slope in carbonates from Martian meteorites is similar to that observed in carbonates from terrestrial alkaline springs, so if corresponding enrichments in Δ47 could be identified in Martian carbonates, it could suggest that alkaline springs were present on the surface of Mars. Clumped isotope signals could also help distinguish carbon sources: kinetic enrichments in Δ47 would be absent or diminished in high-pH carbonates

  12. Gas uptake and thermal stability analysis of boron nitride and carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Guan, Mengyu

    Carbon nanotubes (CNTs) exist in many forms and can have critical pore diameters on the angstrom length scale, making them suitable for molecular capture. By combining the porous structure of CNTs with the chemical stability of carbide and/or nitride materials, one can create a more robust, nanoporous material for gas capture in high temperature conditions. Boron nitride nanotubes (BNNTs) are more chemically and thermally robust than pure CNTs, and were synthesized using CNTs as a structural precursor. However, this reaction mechanism was found to be unfavorable to produce high-yield and purity BNNTs. Adsorption tests using gases of interest (N2, He) were performed on commercial CNTs and BNNTs to determine their porosity and gas uptake abilities. Their thermal stability and oxidation resistance when heated up to 1773 K in air was also studied using differential scanning calorimetry and thermogravimetric analysis. While the CNTs began to oxidize between 450 °C and 750 °C, depending on the nanotube diameter, the BNNTs remained stable up until 1000 °C.

  13. Partial carbonized nanoporous resin for uptake of lead from aqueous solution.

    PubMed

    Ghiloufi, I; Al-Hobaib, A S; El Mir, L

    2015-01-01

    Four partial carbonized nanoporous resins (PCNRs), based on organic xerogel compounds, were synthesised by the sol-gel method from pyrogallol and formaldehyde mixtures in water using picric acid as catalyst. The PCNRs were prepared at different pyrolysis temperatures: T(1) = 200 °C (PF-200), T(2) = 300 °C (PF-300), T(3) = 400 °C (PF-400), or T(4) = 500 °C (PF-500). The PCNRs were characterized by scanning electron microscopy, transmission electron microscopy, X-ray diffraction, Fourier transformed infrared spectroscopy, and nitrogen porosimetry. The obtained results show that PF-200 is more efficient for the removal of Pb(2+) from aqueous solution than the other adsorbent prepared in this study. The characteristics of lead uptake by PF-200 were explored using well-established and effective parameters including pH, contact time, initial metal ion concentration and temperature. Optimum adsorption of Pb(2+), using PF-200, was observed at pH 4.5. The Langmuir model gave a better fit than the other models, and kinetic studies revealed that the adsorption was well fitted by the pseudo second-order kinetic model and thermodynamic properties, i.e., Gibbs free energy change, enthalpy change and entropy change, showed that adsorption of Pb(2+) onto PF-200 was endothermic, spontaneous and feasible in the temperature range of 298-328 K. PMID:26360758

  14. The role of destabilization of palladium hydride in the hydrogen uptake of Pd-containing activated carbons.

    PubMed

    Bhat, V V; Contescu, C I; Gallego, N C

    2009-05-20

    This paper reports on differences in stability of Pd hydride phases in palladium particles with various degrees of contact with microporous carbon supports. A sample containing Pd embedded in activated carbon fibre (2 wt% Pd) was compared with commercial Pd nanoparticles deposited on microporous activated carbon (3 wt% Pd) and with support-free nanocrystalline palladium. The morphology of the materials was characterized by electron microscopy, and the phase transformations were analysed over a large range of hydrogen partial pressures (0.003-10 bar) and at several temperatures using in situ x-ray diffraction. The results were verified with volumetric hydrogen uptake measurements. Results indicate that higher degrees of Pd-carbon contacts for Pd particles embedded in a microporous carbon matrix induce efficient 'pumping' of hydrogen out of beta- PdHx. It was also found that thermal cleaning of carbon surface groups prior to exposure to hydrogen further enhances the hydrogen pumping power of the microporous carbon support. In brief, this study highlights that the stability of beta- PdHx phase supported on carbon depends on the degree of contact between Pd and carbon and on the nature of the carbon surface.

  15. Thin-film versus slurry-phase carbonation of steel slag: CO₂ uptake and effects on mineralogy.

    PubMed

    Baciocchi, R; Costa, G; Di Gianfilippo, M; Polettini, A; Pomi, R; Stramazzo, A

    2015-01-01

    The results of direct aqueous accelerated carbonation of three types of steel manufacturing residues, including an electric arc furnace (EAF) slag and two basic oxygen furnace (BOF) slags, are reported. Batch accelerated carbonation tests were conducted at different temperatures and CO2 pressures applying the thin-film route (liquid to solid, L/S, ratio=0.3L/kg) or the slurry-phase route (L/S ratio=5L/kg). The CO2 uptake strongly depended on both the slag characteristics and the process route; maximum yields of 280 (EAF), 325 (BOF1) and 403 (BOF2) gCO2/kg slag were achieved in slurry phase at T=100°C and pCO2=10 bar. Differently from previous studies, additional carbonates (other than Ca-based phases) were retrieved in the carbonated BOF slags, indicating that also Mg-, Fe- and Mn-containing phases partially reacted with CO2 under the tested conditions. The results hence show that the effects of accelerated carbonation in terms of CO2 uptake capacity, yield of mineral conversion into carbonates and mineralogy of the treated product, strongly rely on several factors. These include, above all, the mineralogy of the original material and the operating conditions adopted, which thus need specific case-by-case optimization to maximize the CO2 sequestration yield.

  16. [Impact of Rocky Desertification Treatment on Underground Water Chemistry and Dissolved Inorganic Carbon Isotope in Karst Areas].

    PubMed

    Xiao, Shi-zhen; Xiong, Kang-ning; Lan, Jia-cheng; Zhang, Hui; Yang, Long

    2015-05-01

    Five springs representing different land-use types and different karst rocky desertification treatment models were chosen at the Huajiang Karst Rocky Desertification Treatment Demonstration Site in Guanling-Zhenfeng Counties in Guizhou, to analyze the features of underground water chemistry and dissolved inorganic carbon isotopes (δ13C(DIC)) and reveal the effect of rocky desertification treatment on karstification and water quality. It was found that, the underground water type of the research area was HCO3-Ca; the water quality of the springs which were relatively less affected by human activities including Shuijingwan Spring (SJW) , Gebei Spring (GB), and Maojiawan Spring (MJW) was better than those relatively more affected by human activities including Diaojing Spring (DJ) and Tanjiazhai Spring (TJZ) , the main ion concentrations and electrical conductivity of which were higher; pH, SIc and pCO2 were sensitive to land-use types and rocky desertification treatment, which could be shown by the higher pH and SIc and lower pCO2 in MJW than those in the other four springs; (Ca(2+) + Mg2+)/HCO(3-) of SJW, MJW and GB were nearly 1:1, dominated by carbonate rock weathering by carbon acid, while the (Ca(2+) + Mg2+) of DJ and TJZ was much higher than HCO3-, suggesting that sulfate and nitrate might also dissolve carbonate rock because of the agricultural activities; δ13C(DIC) was lighter in wet season because of the higher biological activities; the average δ13C(DIC) was in the order of DJ (-12.79 per thousand) < SJW (-12.48 per thousand) < GB (-10.76 per thousand)) < MJW (-10.30 per thousand) < TJZ (-6.70 per thousand), which demonstrated that δ13C(DIC) would be heavier after rocky desertification and lighter after the rocky desertification are treated and controlled. PMID:26314104

  17. Transport and storage of CO2 in the ocean ——an inorganic ocean-circulation carbon cycle model

    NASA Astrophysics Data System (ADS)

    Maier-Reimer, E.; Hasselmann, K.

    1987-08-01

    Inorganic carbon in the ocean is modelled as a passive tracer advected by a three-dimensional current field computed from a dynamical global ocean circulation model. The carbon exchange between the ocean and atmosphere is determined directly from the (temperature-dependent) chemical interaction rates in the mixed layer, using a standard CO2 flux relation at the air-sea interface. The carbon cycle is closed by coupling the ocean to a one-layer, horizontally diffusive atmosphere. Biological sources and sinks are not included. In this form the ocean carbon model contains essentially no free tuning parameters. The model may be regarded as a reference for interpreting numerical experiments with extended versions of the model including biological processes in the ocean (Bacastow R and Maier-Reimer E in prep.) and on land (Esser G et al in prep.). Qualitatively, the model reproduces the principal features of the observed CO2 distribution bution in the surface ocean. However, the amplitudes of surface pCO2 are underestimated in upwelling regions by a factor of the order of 1.5 due to the missing biological pump. The model without biota may, nevertheless, be applied to compute the storage capacity of the ocean to first order for anthropogenic CO2 emissions. In the linear regime, the response of the model may be represented by an impulse response function which can be approximated by a superposition of exponentials with different amplitudes and time constants. This provides a simple reference for comparison with box models. The largest-amplitude (˜0.35) exponential has a time constant of 300 years. The effective storage capacity of the oceans is strongly dependent on the time history of the anthropogenic input, as found also in earlier box model studies.

  18. [Impact of Rocky Desertification Treatment on Underground Water Chemistry and Dissolved Inorganic Carbon Isotope in Karst Areas].

    PubMed

    Xiao, Shi-zhen; Xiong, Kang-ning; Lan, Jia-cheng; Zhang, Hui; Yang, Long

    2015-05-01

    Five springs representing different land-use types and different karst rocky desertification treatment models were chosen at the Huajiang Karst Rocky Desertification Treatment Demonstration Site in Guanling-Zhenfeng Counties in Guizhou, to analyze the features of underground water chemistry and dissolved inorganic carbon isotopes (δ13C(DIC)) and reveal the effect of rocky desertification treatment on karstification and water quality. It was found that, the underground water type of the research area was HCO3-Ca; the water quality of the springs which were relatively less affected by human activities including Shuijingwan Spring (SJW) , Gebei Spring (GB), and Maojiawan Spring (MJW) was better than those relatively more affected by human activities including Diaojing Spring (DJ) and Tanjiazhai Spring (TJZ) , the main ion concentrations and electrical conductivity of which were higher; pH, SIc and pCO2 were sensitive to land-use types and rocky desertification treatment, which could be shown by the higher pH and SIc and lower pCO2 in MJW than those in the other four springs; (Ca(2+) + Mg2+)/HCO(3-) of SJW, MJW and GB were nearly 1:1, dominated by carbonate rock weathering by carbon acid, while the (Ca(2+) + Mg2+) of DJ and TJZ was much higher than HCO3-, suggesting that sulfate and nitrate might also dissolve carbonate rock because of the agricultural activities; δ13C(DIC) was lighter in wet season because of the higher biological activities; the average δ13C(DIC) was in the order of DJ (-12.79 per thousand) < SJW (-12.48 per thousand) < GB (-10.76 per thousand)) < MJW (-10.30 per thousand) < TJZ (-6.70 per thousand), which demonstrated that δ13C(DIC) would be heavier after rocky desertification and lighter after the rocky desertification are treated and controlled.

  19. Fully-drawn carbon-based chemical sensors on organic and inorganic surfaces.

    PubMed

    Frazier, Kelvin M; Mirica, Katherine A; Walish, Joseph J; Swager, Timothy M

    2014-10-21

    Mechanical abrasion is an extremely simple, rapid, and low-cost method for deposition of carbon-based materials onto a substrate. However, the method is limited in throughput, precision, and surface compatibility for drawing conductive pathways. Selective patterning of surfaces using laser-etching can facilitate substantial improvements to address these current limitations for the abrasive deposition of carbon-based materials. This study demonstrates the successful on-demand fabrication of fully-drawn chemical sensors on a wide variety of substrates (e.g., weighing paper, polymethyl methacrylate, silicon, and adhesive tape) using single-walled carbon nanotubes (SWCNTs) as sensing materials and graphite as electrodes. Mechanical mixing of SWCNTs with solid or liquid selectors yields sensors that can detect and discriminate parts-per-million (ppm) quantities of various nitrogen-containing vapors (pyridine, aniline, triethylamine). PMID:25170814

  20. Fully-Drawn Carbon-Based Chemical Sensors on Organic and Inorganic Surfaces

    PubMed Central

    Frazier, Kelvin M.; Mirica, Katherine A.; Walish, Joseph J.

    2014-01-01

    Mechanical abrasion is an extremely simple, rapid, and low cost method for deposition of carbon-based materials onto a substrate. However, the method is limited in throughput, precision, and surface compatibility for drawing conductive pathways. Selective patterning of surfaces using laser etching can facilitate substantial improvements to address these current limitations for the abrasive deposition of carbon-based materials. This study demonstrates the successful on-demand fabrication of fully-drawn chemical sensors on a wide variety of substrates (e.g., weighing paper, polymethyl methacrylate, silicon, and adhesive tape) using single-walled carbon nanotubes (SWCNTs) as sensing materials and graphite as electrodes. Mechanical mixing of SWCNTs with solid or liquid selectors yields sensors that can detect and discriminate parts-per-million (ppm) quantities of various nitrogen-containing vapors (pyridine, aniline, triethylamine). PMID:25170814

  1. Nocardioides, Sediminibacterium, Aquabacterium, Variovorax, and Pseudomonas linked to carbon uptake during aerobic vinyl chloride biodegradation.

    PubMed

    Wilson, Fernanda Paes; Liu, Xikun; Mattes, Timothy E; Cupples, Alison M

    2016-10-01

    Vinyl chloride (VC) is a frequent groundwater contaminant and a known human carcinogen. Bioremediation is a potential cleanup strategy for contaminated sites; however, little is known about the bacteria responsible for aerobic VC degradation in mixed microbial communities. In attempts to address this knowledge gap, the microorganisms able to assimilate labeled carbon ((13)C) from VC within a mixed culture capable of rapid VC degradation (120 μmol in 7 days) were identified using stable isotope probing (SIP). For this, at two time points during VC degradation (days 3 and 7), DNA was extracted from replicate cultures initially supplied with labeled or unlabeled VC. The extracted DNA was ultracentrifuged, fractioned, and the fractions of greater buoyant density (heavy fractions, 1.758 to 1.780 g mL(-1)) were subject to high-throughput sequencing. Following this, specific primers were designed for the most abundant phylotypes in the heavy fractions. Then, quantitative PCR (qPCR) was used across the buoyant density gradient to confirm label uptake by these phylotypes. From qPCR and/or sequencing data, five phylotypes were found to be dominant in the heavy fractions, including Nocardioides (∼40 %), Sediminibacterium (∼25 %), Aquabacterium (∼17 %), Variovorax (∼6 %), and Pseudomonas (∼1 %). The abundance of two functional genes (etnC and etnE) associated with VC degradation was also investigated in the SIP fractions. Peak shifts of etnC and etnE gene abundance toward heavier fractions were observed, indicating uptake of (13)C into the microorganisms harboring these genes. Analysis of the total microbial community indicated a significant dominance of Nocardioides over the other label-enriched phylotypes. Overall, the data indicate Nocardioides is primarily responsible for VC degradation in this mixed culture, with the other putative VC degraders generating a small growth benefit from VC degradation. The specific primers designed toward the putative VC

  2. The effects of transient storage on carbon uptake in a sub-arctic stream in interior Alaska

    NASA Astrophysics Data System (ADS)

    Rinehart, A.; Jones, J. B.

    2010-12-01

    The fate of dissolved organic carbon (DOC) in streams is largely controlled by organic matter and nutrient inputs from the catchment, biotic uptake, and hydrologic retention within transient storage zones (hyporheic zone, pools, eddies). The hyporheic zone can be an important site for processing of organic matter and, thus hydrologic residence time in transient storage is an important factor regulating carbon uptake. Our research examined transient storage and carbon uptake in a sub-arctic stream to understand the mechanisms affecting hyporheic carbon cycling in streams underlain by warming permafrost. The research was conducted in a stream draining a low permafrost catchment in the Caribou-Poker Creeks Research Watershed in interior Alaska, in which permafrost underlies ~5% of the catchment. Short-term steady-state solute injections of a conservative tracer and acetate were performed in the summers of 2008 through 2010 to capture variation in soil thaw and stream discharge. Transient storage was described with the one-dimensional transport with inflow and storage (OTIS) model. Carbon uptake was determined by calculating the mass transfer coefficient (Vf; mm/min), which describes the vertical velocity of carbon across the stream/sediment interface. Residence time in transient storage increased with discharge, but was not related to thaw depth suggesting the hyporheic zone is relatively shallow compared to the thaw bulb beneath the stream. The stream is highly incised with thick vegetation along the banks. High discharge may result in increased lateral hydrologic exchange with flowpaths through the stream bank. Stream flow frequently cuts into and under the bank up to 50 cm (average width = 80 cm) creating “lateral pockets,” and vegetation roots create pools. During high flows these surface features may increase surface storage and enhance lateral exchange. The carbon mass transfer coefficient (mm/min) decreased with discharge revealing more efficient carbon

  3. In vivo measurement of carbon-11 thymidine uptake in non-Hodgkin's lymphoma using positron emission tomography

    SciTech Connect

    Martiat, P.; Ferrant, A.; Labar, D.; Cogneau, M.; Bol, A.; Michel, C.; Michaux, J.L.; Sokal, G.

    1988-10-01

    Carbon-11 thymidine (TdR) uptake using positron emission tomography (PET) has been measured in ten patients with non-Hodgkin's lymphoma (NHL). The rate of TdR uptake (mean +/- s.d.) was of 0.009 +/- 0.006 mumol.100 cc-1.min-1 in low-grade NHL. This rate was 0.063 +/- 0.049 mumol.100 cc-1.min-1 in intermediate-grade NHL and 0.159 mumol.100 cc-1.min-1 in a patient with high-grade NHL. Lymphoma radioactivity reached a plateau at 0.42 +/- 0.22%. 100 cc-1 of the injected dose from 10 min after injection. The highest /sup 11/C uptakes were observed in the kidneys and in the liver (3.30 +/- 1.30 and 2.10 +/- 0.05%. 100 cc-1 of the injected dose, respectively). The lymphoma-to-muscle ratio was of 11.8 +/- 1.7, whereas the lymphoma-to-intestine ratio was of 1.5 +/- 0.7. Accordingly, the measurement of (/sup 11/C)TdR uptake in the abdomen may need other imaging methods for adequate interpretation. The results suggest that (/sup 11/C)TdR uptake using PET might be a method for noninvasively measuring cell proliferation in vivo.

  4. Microbial conversion of inorganic carbon to dimethyl sulfide in anoxic lake sediment (Plußsee, Germany)

    NASA Astrophysics Data System (ADS)

    Lin, Y. S.; Heuer, V. B.; Ferdelman, T. G.; Hinrichs, K.-U.

    2010-08-01

    In anoxic environments, volatile methylated sulfides like methanethiol (MT) and dimethyl sulfide (DMS) link the pools of inorganic and organic carbon with the sulfur cycle. However, direct formation of methylated sulfides from reduction of dissolved inorganic carbon has previously not been demonstrated. When studying the effect of temperature on hydrogenotrophic microbial activity, we observed formation of DMS in anoxic sediment of Lake Plußsee at 55 °C. Subsequent experiments strongly suggested that the formation of DMS involves fixation of bicarbonate via a reductive pathway in analogy to methanogenesis and engages methylation of MT. DMS formation was enhanced by addition of bicarbonate and further increased when both bicarbonate and H2 were supplemented. Inhibition of DMS formation by 2-bromoethanesulfonate points to the involvement of methanogens. Compared to the accumulation of DMS, MT showed the opposite trend but there was no apparent 1:1 stoichiometric ratio between both compounds. Both DMS and MT had negative δ13C values of -62‰ and -55‰, respectively. Labeling with NaH13CO3 showed more rapid incorporation of bicarbonate into DMS than into MT. The stable carbon isotopic evidence implies that bicarbonate was fixed via a reductive pathway of methanogenesis, and the generated methyl coenzyme M became the methyl donor for MT methylation. Neither DMS nor MT accumulation were stimulated by addition of the methyl-group donors methanol and syringic acid or by the methyl-group acceptor hydrogen sulphide. The source of MT was further investigated in a H235S labeling experiment, which demonstrated a microbially-mediated process of hydrogen sulfide methylation to MT that accounted for only <10% of the accumulation rates of DMS. Therefore, the major source of the 13C-depleted MT was neither bicarbonate nor methoxylated aromatic compounds. Other possibilities for isotopically depleted MT, such as other organic precursors like methionine, are discussed. This DMS

  5. [Effects of heavy metal (copper and cadmium) coupled with Ulca pertusa on marine inorganic carbon system in simulated experiments].

    PubMed

    Zheng, Guo-xia; Song, Jin-ming; Dai, Ji-cui

    2006-12-01

    Simulated experiments coupled with ocean biota dynamics were performed in laboratory. In these experiments, effects of heavy metal (copper and cadmium) coupled with Ulca pertusa on marine inorganic carbon system and CO2 fluxes were investigated. The results indicated that concentration changes (delta) of components in carbon dioxide system with time scale were correlated with the concentrations and kinds of heavy metal. In copper groups and cadmium groups (0.1 micromol x L(-1) and 1 micromol x L(-1)), DIC HCO3- and PCO2 significantly decreased comparing to the control experiment data( p = 0.01). However, when the heavy metal infusions were higher than the "critical concentration", the above mentioned parameters increased with time scale and their increments followed the uptrend with increasing heavy metal concentrations. The "critical concentration" in copper groups was much lower than that in cadmium groups, which attributed to the tolerance diversity of Ulca pertusa to copper and cadmium. Furthermore, CO2 fluxes under the influences of heavy metal were also regularly changed with time. Sea waters with low infusions of heavy metal represented as sinks to the atmosphere CO2. These sinks would probably convert into CO2 sources after a period of time. Sea waters with comparatively high amount of heavy metal were always to be CO2 sources, and their release fluxes of CO2 augmented along with the increasing infusions of heavy metal.

  6. Radiocarbon dating of dissolved inorganic carbon in groundwater from confined parts of the Upper Floridan aquifer, Florida, USA

    USGS Publications Warehouse

    Plummer, L.N.; Sprinkle, C.L.

    2001-01-01

    Geochemical reaction models were evaluated to improve radiocarbon dating of dissolved inorganic carbon (DIC) in groundwater from confined parts of the Upper Floridan aquifer in central and northeastern Florida, USA. The predominant geochemical reactions affecting the 14C activity of DIC include (1) dissolution of dolomite and anhydrite with ca