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Sample records for inorganic carbon uptake

  1. Inorganic Carbon Uptake by Chlamydomonas reinhardtii1

    PubMed Central

    Moroney, James V.; Tolbert, N. Edward

    1985-01-01

    The rates of CO2-dependent O2 evolution by Chlamydomonas reinhardtii, grown with either air levels of CO2 or air with 5% CO2, were measured at varying external pH. Over a pH range of 4.5 to 8.5, the external concentration of CO2 required for half-maximal rates of photosynthesis was constant, averaging 25 micromolar for cells grown with 5% CO2. This is consistent with the hypothesis that these cells take up CO2 but not HCO3− from the medium and that their CO2 requirement for photosynthesis reflects the Km(CO2) of ribulose bisphosphate carboxylase. Over a pH range of 4.5 to 9.5, cells grown with air required an external CO2 concentration of only 0.4 to 3 micromolar for half-maximal rates of photosynthesis, consistent with a mechanism to accumulate external inorganic carbon in these cells. Air-grown cells can utilize external inorganic carbon efficiently even at pH 4.5 where the HCO3− concentration is very low (40 nanomolar). However, at high external pH, where HCO3− predominates, these cells cannot accumulate inorganic carbon as efficiently and require higher concentrations of NaHCO3 to maintain their photosynthetic activity. These results imply that, at the plasma membrane, CO2 is the permeant inorganic carbon species in air-grown cells as well as in cells grown on 5% CO2. If active HCO3− accumulation is a step in CO2 concentration by air-grown Chlamydomonas, it probably takes place in internal compartments of the cell and not at the plasmalemma. PMID:16664038

  2. Uptake of inorganic carbon in conical structures formed by cyanobacteria

    NASA Astrophysics Data System (ADS)

    Liang, B.; Vali, H.; Wu, T.; Guerquin-Kern, J.; Petroff, A.; Sim, M.; Rothman, D.; Bosak, T.

    2008-12-01

    Strongly influenced by environmental processes such as waves, currents and sedimentation, macroscopic shapes of stromatolites are at best ambiguous biomarkers. Conical stromatolites are an exception to this, because their shape is thought to indicate the former presence of photosynthetic microbes that moved toward light. We investigate the biological basis of the formation of macroscopic cones in the cultures of modern cone-forming cyanobacteria from Yellowstone National Park. We demonstrate that these cyanobacteria can form cones oriented in the opposite direction from light, implying that phototaxis is not the only mechanism that generates conical shapes. We hypothesize that, under the conditions of low flow and inorganic carbon limitation, conical shapes may be advantageous for the uptake and cycling of carbon within the microbial aggregate. Our models of the diffusion of inorganic carbon predict that more vigorous uptake of inorganic carbon by microbes in the tips of cones can be expected simply due to the geometry of the microbial aggregate. We test this model by investigating the uptake and incorporation of carbon in cones and the adjacent flat mats by using 13C labeling measured by nanoscale secondary ionization mass spectrometer (nano-SIMS). Steady state rate of carbon uptake through the cone shows that 13C is taken up throughout the structure. Both carbon uptake and the cell density are high in the tips, supporting the idea that cone tip is an area that favors microbial growth. These measurements, combined with the ability of cyanobacteria to form cones against a light gradient suggest that the faster growth of tips can be influenced by the internal distribution of nutrients, in addition to phototaxis. Conical shapes in microbial mats and fossil stromatolites can thus be viewed as a macroscopic consequence of the biological response to environmental gradients at a microscale.

  3. Uptake of inorganic carbon and nitrate by marine plankton and the Redfield ratio

    SciTech Connect

    Banse, K. )

    1994-03-01

    This paper reexamines the previously studied question of uptake ratios of dissolved inorganic carbon and nitrate in plankton blooms. The author concludes that unless explicit justification is provided, nitrate consumption cannot be converted into community net production of particulate and dissolved organic carbon. 17 refs., 2 figs.

  4. Involvement of H(+)-ATPase and carbonic anhydrase in inorganic carbon uptake for endosymbiont photosynthesis.

    PubMed

    Furla, P; Allemand, D; Orsenigo, M N

    2000-04-01

    Symbiotic cnidarians absorb inorganic carbon from seawater to supply intracellular dinoflagellates with CO(2) for their photosynthesis. To determine the mechanism of inorganic carbon transport by animal cells, we used plasma membrane vesicles prepared from ectodermal cells isolated from tentacles of the sea anemone, Anemonia viridis. H(14)CO(-)(3) uptake in the presence of an outward NaCl gradient or inward H(+) gradient, showed no evidence for a Cl(-)- or H(+)- driven HCO(-)(3) transport. H(14)CO(-)(3) and (36)Cl(-) uptakes were stimulated by a positive inside-membrane diffusion potential, suggesting the presence of HCO(-)(3) and Cl(-) conductances. A carbonic anhydrase (CA) activity was measured on plasma membrane (4%) and in the cytoplasm of the ectodermal cells (96%) and was sensitive to acetazolamide (IC(50) = 20 nM) and ethoxyzolamide (IC(50) = 2.5 nM). A strong DIDS-sensitive H(+)-ATPase activity was observed (IC(50) = 14 microM). This activity was also highly sensitive to vanadate and allyl isothiocyanate, two inhibitors of P-type H(+)-ATPases. Present data suggest that HCO(-)(3) absorption by ectodermal cells is carried out by H(+) secretion by H(+)-ATPase, resulting in the formation of carbonic acid in the surrounding seawater, which is quickly dehydrated into CO(2) by a membrane-bound CA. CO(2) then diffuses passively into the cell where it is hydrated in HCO(-)(3) by a cytosolic CA.

  5. Laboratory investigation of inorganic carbon uptake by cryoconite debris from Werenskioldbreen, Svalbard

    NASA Astrophysics Data System (ADS)

    Stibal, Marek; Tranter, Martyn

    2007-12-01

    Laboratory experiments were undertaken to determine the inorganic carbon uptake rate and the interactions between photosynthesis and water chemistry, particularly pH and nutrient concentrations, for cryoconite debris from Werenskioldbreen, a well-researched Svalbard glacier. Microorganisms in cryoconite debris took up inorganic carbon at rates between 0.6 and 15 μg C L-1 h-1 and fixed it as organic carbon. Cyanobacterial photosynthesis (75-93%) was the main process responsible for inorganic carbon fixation, while heterotrophic uptake (6-15%) only accounted for a minor part. The microbes in cryoconite debris were active shortly after melt and fixed carbon as long as there were favorable conditions. They were not truly psychrophilic: their physiological optimum temperature was higher than is prevalent in cryoconite holes. The pH was also a factor affecting photosynthesis in the cryoconite slurry. The highest dissolved inorganic carbon (DIC) uptake rates per liter of slurry occurred at pH ˜7, and there was a significant correlation between the initial pH and DIC fixation on a per cell basis, showing increasing DIC uptake rates when pH increased from ˜5.5 to 9. Inorganic carbon fixation resulted in an increased pH in solution. However, the microbes were able to photosynthesize in a wide range of pH from ˜4 to ˜10. The average C:N:P molar ratios in solution were ˜350:75:1. Unlike nitrogen, phosphorus concentrations decreased with increasing carbon uptake, and when the rate approached ˜15 μg C L-1 h-1, all available dissolved phosphorus was utilized within 6 h. Hence phosphorus is probably biolimiting in this system.

  6. Inorganic carbon uptake during photosynthesis. II. Uptake by isolated Asparagus mesophyll cells during isotopic disequilibrium. [Asparagus sprengeri

    SciTech Connect

    Espie, G.S.; Owttrim, G.W.; Colman, B.

    1986-04-01

    The species of inorganic carbon (CO/sub 2/ or HCO/sub 3//sup -/) taken up as a source of substrate for photosynthetic fixation by isolated Asparagus sprengeri mesophyll cells is investigated. Discrimination between CO/sub 2/ or HCO/sub 3//sup -/ transport, during steady state photosynthesis, is achieved by monitoring the changes (by /sup 14/C fixation) which occur in the specific activity of the intracellular pool of inorganic carbon when the inorganic carbon present in the suspending medium is in a state of isotopic disequilibrium. Quantitative comparisons between theoretical (CO/sub 2/ or HCO/sub 3//sup -/ transport) and experimental time-courses of /sup 14/C incorporation, over the pH range of 5.2 to 7.5, indicate that the specific activity of extracellular CO/sub 2/, rather than HCO/sub 3//sup -/, is the appropriate predictor of the intracellular specific activity. It is concluded, therefore, that CO/sub 2/ is the major source of exogenous inorganic carbon taken up by Asparagus cells. However, at high pH (8.5), a component of net DIC uptake may be attributable to HCO/sub 3//sup -/ transport, as the incorporation of /sup 14/C during isotopic disequilibrium exceeds the maximum possible incorporation predicted on the basis of CO/sub 2/ uptake alone. The contribution of HCO/sub 3//sup -/ to net inorganic carbon uptake (pH 8.5) is variable, ranging from 5 to 16%, but is independent of the extracellular HCO/sub 3//sup -/ concentration. The evidence for direct HCO/sub 3//sup -/ transport is subject to alternative explanations and must, therefore, be regarded as equivocal. Nonlinear regression analysis of the rate of /sup 14/C incorporation as a function of time indicates the presence of a small extracellular resistance to the diffusion of CO/sub 2/, which is partially alleviated by a high extracellular concentration of HCO/sub 3//sup -/.

  7. Characteristics of Light-Dependent Inorganic Carbon Uptake by Isolated Spinach Chloroplasts

    PubMed Central

    Sicher, Richard C.

    1984-01-01

    The light-dependent accumulation of radioactively labeled inorganic carbon in isolated spinach (Spinacia oleracea L.) chloroplasts was determined by silicone oil filtering centrifugation. Intact chloroplasts, dark-incubated 60 seconds at pH 7.6 and 23°C with 0.5 millimolar sodium bicarbonate, contained 0.5 to 1.0 millimolar internal inorganic carbon. The stromal pool of inorganic carbon increased 5- to 7-fold after 2 to 3 minutes of light. The saturated internal bicarbonate concentration of illuminated spinach chloroplasts was 10- to 20-fold greater than that of the external medium. This ratio decreased at lower temperatures and with increasing external bicarbonate. Over one-half the inorganic carbon found in intact spinach chloroplasts after 2 minutes of light was retained during a subsequent 3-minute dark incubation at 5°C. Calculations of light-induced stromal alkalization based on the uptake of radioactively labeled bicarbonate were 0.4 to 0.5 pH units less than measurements performed with [14C]dimethyloxazolidine-dione. About one-third of the binding sites on the enzyme ribulose 1,5-bisphosphate carboxylase were radiolabeled when the enzyme was activated in situ and 14CO2 bound to the activator site was trapped in the presence of carboxypentitol bisphosphates. Deleting orthophosphate from the incubation medium eliminated inorganic carbon accumulation in the stroma. Thus, bicarbonate ion distribution across the chloroplast envelope was not strictly pH dependent as predicted by the Henderson-Hasselbach formula. This finding is potentially explained by the presence of bound CO2 in the chloroplast. PMID:16663542

  8. Dissolved inorganic carbon enhanced growth, nutrient uptake, and lipid accumulation in wastewater grown microalgal biofilms.

    PubMed

    Kesaano, Maureen; Gardner, Robert D; Moll, Karen; Lauchnor, Ellen; Gerlach, Robin; Peyton, Brent M; Sims, Ronald C

    2015-03-01

    Microalgal biofilms grown to evaluate potential nutrient removal options for wastewaters and feedstock for biofuels production were studied to determine the influence of bicarbonate amendment on their growth, nutrient uptake capacity, and lipid accumulation after nitrogen starvation. No significant differences in growth rates, nutrient removal, or lipid accumulation were observed in the algal biofilms with or without bicarbonate amendment. The biofilms possibly did not experience carbon-limited conditions because of the large reservoir of dissolved inorganic carbon in the medium. However, an increase in photosynthetic rates was observed in algal biofilms amended with bicarbonate. The influence of bicarbonate on photosynthetic and respiration rates was especially noticeable in biofilms that experienced nitrogen stress. Medium nitrogen depletion was not a suitable stimulant for lipid production in the algal biofilms and as such, focus should be directed toward optimizing growth and biomass productivities to compensate for the low lipid yields and increase nutrient uptake. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Dissolved inorganic carbon speciation in aquatic environments and its application to monitor algal carbon uptake.

    PubMed

    Chen, Yimin; Zhang, Liang; Xu, Changan; Vaidyanathan, Seetharaman

    2016-01-15

    Dissolved inorganic carbon (DIC) speciation is an important parameter that enables chemical and ecological changes in aquatic environments, such as the aquatic environmental impact of increasing atmospheric CO2 levels, to be monitored. We have examined and developed a sensitive and cost-effective 'back-titration' method to determine the DIC species and abundance in aqueous environments that is more accurate and reproducible than existing methods and is applicable in a range of fresh, brackish and sea waters. We propose the use of pHHCO3 (bicarbonate-dominant pH) and pH3.5 as the titration end points in the back-titration technique to accurately determine carbonate alkalinity. The proposed method has a higher accuracy and precision than other modified Gran's methods that are currently in use. The detection limit was found to be ~5 μmol kg(-1) with an accuracy within 1% and a precision (CV) within 0.2% and 0.5% at high and low level of carbonates, respectively. This method was successfully applied to monitor DIC in the aqueous medium of Nannochlopsis salina cultivation separately carried out with NaHCO3 and CO2 as the respective inorganic carbon source. The cells were able to grow in the NaHCO3 medium with a similar growth curve to cells with 0.039% CO2 (air). Increases in CO2 level stimulated lipid accumulation by diverting the fixed carbon from protein to lipids. The increased concentration of gaseous CO2 and the accompanying lower pH appears to significantly inhibit the growth of algae despite the presence of HCO3(-) when 20% CO2 was employed. Copyright © 2015 Elsevier B.V. All rights reserved.

  10. Is There a Role for the 42 Kilodalton Polypeptide in Inorganic Carbon Uptake by Cyanobacteria? 1

    PubMed Central

    Schwarz, Rakefet; Friedberg, Devorah; Kaplan, Aaron

    1988-01-01

    Cyanobacterial cells accumulate substantial amounts of a membrane-associated 42 kilodalton polypeptide during adaptation to low CO2 conditions. The role of this polypeptide in the process of adaptation and in particular in the large increase in the ability to accumulate inorganic carbon (Ci), which accompanies this process, is not yet understood. We have isolated a mutant Synechococcus PCC7942 that does not accumulate the 42 kilodalton polypeptide. The mutant requires a high-CO2 concentration for growth and exhibits a very low apparent photosynthetic affinity for extracellular Ci. The latter might be attributable to the observed defective ability of the mutant to utilize the intracellular Ci pool for photosynthesis. The 42 kilodalton polypeptide does not appear to participate directly in the active transport of Ci, since the difference between the observed capabilities for CO2 and HCO3− uptake of the mutant and the wild type is not sufficient to account for their different growth and photosynthetic performance. Furthermore, high CO2-grown wild-type cells, where we could not detect the 42 kilodalton polypeptide, transported CO2 faster than the mutant. An analysis of the curves relating the rate of accumulation of Ci to the concentration of CO2 or HCO3− supplied, in the presence or absence of carbonic anhydrase, indicated that under the experimental conditions used here, CO2 was the preferred Ci species taken up by Synechococcus. Images Fig. 1 PMID:16666296

  11. Synergistic effects of dissolved organic carbon and inorganic nitrogen on methane uptake in forest soils without and with freezing treatment

    PubMed Central

    Wu, Haohao; Xu, Xingkai; Duan, Cuntao; Li, Tuansheng; Cheng, Weiguo

    2016-01-01

    There is limited knowledge about how the interaction of dissolved organic carbon (DOC) and inorganic nitrogen (N) released into the soil just after freezing can affect methane (CH4) uptake in forest soils. Here, we present how freezing treatment and glucose, as a DOC source, can affect the roles of NH4+-N and NO3−-N in inhibiting soil CH4 uptake, by using soil-core incubation experiments. A long-term freezing at low temperature reduced cumulative CH4 uptake in the soils sampled from two temperate forest stands without carbon (C) and N addition. The inhibition effects of N addition as NH4Cl and KNO3 on the soil CH4 uptake were much larger than C addition. Freezing treatment eliminated the inhibition effect of NH4Cl and KNO3 addition on CH4 uptake, and this response was affected by glucose addition and forest types. The addition of glucose eliminated the inhibition effect of NO3−-N on CH4 uptake in the forest soils without and with freezing treatment, while the addition of NH4+-N and glucose inhibited synergistically the soil CH4 uptake. The results highlight the importance of synergistic effects of DOC and N inputs on the soil CH4 uptake under forest stands during soil wetting and thawing periods. PMID:27572826

  12. Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria.

    PubMed

    Gaudana, Sandeep B; Zarzycki, Jan; Moparthi, Vamsi K; Kerfeld, Cheryl A

    2015-10-01

    Cyanobacteria have evolved a carbon-concentrating mechanism (CCM) which has enabled them to inhabit diverse environments encompassing a range of inorganic carbon (Ci: [Formula: see text] and CO2) concentrations. Several uptake systems facilitate inorganic carbon accumulation in the cell, which can in turn be fixed by ribulose 1,5-bisphosphate carboxylase/oxygenase. Here we survey the distribution of genes encoding known Ci uptake systems in cyanobacterial genomes and, using a pfam- and gene context-based approach, identify in the marine (alpha) cyanobacteria a heretofore unrecognized number of putative counterparts to the well-known Ci transporters of beta cyanobacteria. In addition, our analysis shows that there is a huge repertoire of transport systems in cyanobacteria of unknown function, many with homology to characterized Ci transporters. These can be viewed as prospective targets for conversion into ancillary Ci transporters through bioengineering. Increasing intracellular Ci concentration coupled with efforts to increase carbon fixation will be beneficial for the downstream conversion of fixed carbon into value-added products including biofuels. In addition to CCM transporter homologs, we also survey the occurrence of rhodopsin homologs in cyanobacteria, including bacteriorhodopsin, a class of retinal-binding, light-activated proton pumps. Because they are light driven and because of the apparent ease of altering their ion selectivity, we use this as an example of re-purposing an endogenous transporter for the augmentation of Ci uptake by cyanobacteria and potentially chloroplasts.

  13. Effects of Air Contact on Growth, Inorganic Carbon Sources, and Nitrogen Uptake by an Amphibious Freshwater Macrophyte.

    PubMed

    Madsen, T. V.; Breinholt, M.

    1995-01-01

    Callitriche cophocarpa Sendtner is a heterophyllous amphibious macrophyte that produces apical rosettes of floating leaves. The importance of air contact for inorganic carbon and N uptake and for growth was investigated. Plants were grown with the floating rosette in contact with air of various humidities (10, 50, and >90% relative humidity) and with the submerged parts in N-free water at 350 [mu]M free CO2 and the roots in sediment with low or high NH3-N content. Humidity greatly affected the transpiration rate, whereas growth rate and N content were unaffected and were comparable to values measured for fully submerged shoots. Air contact had, however, a significant impact on growth when the free CO2 concentration in the water was low. Thus, the growth rate of shoots with air contact was about 3 times faster than the rate of fully submerged shoots when grown at air-equilibrium concentration of dissolved free CO2 in the water (16 [mu]M). This difference decreased with increased dissolved free CO2 concentration in the water, and the two shoot types grew at the same rate when the submerged shoots received >350 [mu]M free CO2. The quantitative importance of the floating rosette for total carbon uptake declined also with decreased ratio of floating rosette to total shoot weight. It is concluded that floating rosettes can enhance the inorganic carbon uptake of Callitriche. In contrast, air contact is of minor importance for nutrient transport.

  14. Uptake-release dynamics of the inorganic and organic carbon pool mediated by planktonic prokaryotes in the deep Mediterranean Sea.

    PubMed

    Celussi, Mauro; Malfatti, Francesca; Ziveri, Patrizia; Giani, Michele; Del Negro, Paola

    2017-03-01

    Understanding the ecosystem functioning in the dark portion of the ocean is a challenge that microbial ecologists are still facing. Due to the large volume, the global deep Ocean plays a central role in the regulation of climate, possibly buffering the rise of atmospheric carbon dioxide if processes of CO2 fixation compensate for respiration. We investigated the rates of several prokaryotic activities (dissolved and particulate primary production, heterotrophic carbon production and respiration) in meso- and bathypelagic waters of the Mediterranean Sea, covering all sub-basins. Chemosynthesis was the main process for C uptake. The rates of organic C (OC) excretion (or viral-induced cell lysis) inferred from the dissolved primary production measurements were noteworthy, being comparable to particulate primary production, and possibly contributing to the formation of non-sinking particulate organic matter. Inorganic C fixation rates were significantly higher than those reported for other deep-sea systems, probably as a consequence of the persistently higher temperature of dark Mediterranean waters or to phylogenetically diverse communities involved in the process. Primary production was negatively correlated with dissolved organic carbon concentration and showed an inverse pattern to heterotrophic carbon production, indicating a niche partitioning between heterotrophs and autotrophs. In sum, the deep Mediterranean Sea harbors active autotrophic communities able to fix inorganic carbon faster than the heterotrophic carbon production rates. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

  15. Disruption of the plastid ycf10 open reading frame affects uptake of inorganic carbon in the chloroplast of Chlamydomonas.

    PubMed Central

    Rolland, N; Dorne, A J; Amoroso, G; Sültemeyer, D F; Joyard, J; Rochaix, J D

    1997-01-01

    The product of the chloroplast ycf10 gene has been localized in the inner chloroplast envelope membrane (Sasaki et al., 1993) and found to display sequence homology with the cyanobacterial CotA product which is altered in mutants defective in CO2 transport and proton extrusion (Katoh et al., 1996a,b). In Chlamydomonas reinhardtii, ycf10, located between the psbI and atpH genes, encodes a putative hydrophobic protein of 500 residues, which is considerably larger than its higher plant homologue because of a long insertion that separates the conserved N and C termini. Using biolistic transformation, we have disrupted ycf10 with the chloroplast aadA expression cassette and examined the phenotype of the homoplasmic transformants. These were found to grow both photoheterotrophically and photoautotrophically under low light, thereby revealing that the Ycf10 product is not essential for the photosynthetic reactions. However, under high light these transformants did not grow photoautotrophically and barely photoheterotrophically. The increased light sensitivity of the transformants appears to result from a limitation in photochemical energy utilization and/or dissipation which correlates with a greatly diminished photosynthetic response to exogenous (CO2 + HCO3-), especially under conditions where the chloroplast inorganic carbon transport system is not induced. Mass spectrometric measurements with either whole cells or isolated chloroplasts from the transformants revealed that the CO2 and HCO3- uptake systems have a reduced affinity for their substrates. The results suggest the existence of a ycf10-dependent system within the plastid envelope which promotes efficient inorganic carbon (Ci) uptake into chloroplasts. PMID:9362486

  16. Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis.

    PubMed

    Sandrini, Giovanni; Matthijs, Hans C P; Verspagen, Jolanda M H; Muyzer, Gerard; Huisman, Jef

    2014-03-01

    Rising CO2 levels may act as an important selective factor on the CO2-concentrating mechanism (CCM) of cyanobacteria. We investigated genetic diversity in the CCM of Microcystis aeruginosa, a species producing harmful cyanobacterial blooms in many lakes worldwide. All 20 investigated Microcystis strains contained complete genes for two CO2 uptake systems, the ATP-dependent bicarbonate uptake system BCT1 and several carbonic anhydrases (CAs). However, 12 strains lacked either the high-flux bicarbonate transporter BicA or the high-affinity bicarbonate transporter SbtA. Both genes, bicA and sbtA, were located on the same operon, and the expression of this operon is most likely regulated by an additional LysR-type transcriptional regulator (CcmR2). Strains with only a small bicA fragment clustered together in the phylogenetic tree of sbtAB, and the bicA fragments were similar in strains isolated from different continents. This indicates that a common ancestor may first have lost most of its bicA gene and subsequently spread over the world. Growth experiments showed that strains with sbtA performed better at low inorganic carbon (Ci) conditions, whereas strains with bicA performed better at high Ci conditions. This offers an alternative explanation of previous competition experiments, as our results reveal that the competition at low CO2 levels was won by a specialist with only sbtA, whereas a generalist with both bicA and sbtA won at high CO2 levels. Hence, genetic and phenotypic variation in Ci uptake systems provide Microcystis with the potential for microevolutionary adaptation to changing CO2 conditions, with a selective advantage for bicA-containing strains in a high-CO2 world.

  17. Dissolved inorganic carbon uptake in Thiomicrospira crunogena XCL-2 is Δp- and ATP-sensitive and enhances RubisCO-mediated carbon fixation.

    PubMed

    Menning, Kristy J; Menon, Balaraj B; Fox, Gordon; Scott, Kathleen M

    2016-03-01

    The gammaproteobacterium Thiomicrospira crunogena XCL-2 is an aerobic sulfur-oxidizing hydrothermal vent chemolithoautotroph that has a CO2 concentrating mechanism (CCM), which generates intracellular dissolved inorganic carbon (DIC) concentrations much higher than extracellular, thereby providing substrate for carbon fixation at sufficient rate. This CCM presumably requires at least one active DIC transporter to generate the elevated intracellular concentrations of DIC measured in this organism. In this study, the half-saturation constant (K CO2) for purified carboxysomal RubisCO was measured (276 ± 18 µM) which was much greater than the K CO2 of whole cells (1.03 µM), highlighting the degree to which the CCM facilitates CO2 fixation under low CO2 conditions. To clarify the bioenergetics powering active DIC uptake, cells were incubated in the presence of inhibitors targeting ATP synthesis (DCCD) or proton potential (CCCP). Incubations with each of these inhibitors resulted in diminished intracellular ATP, DIC, and fixed carbon, despite an absence of an inhibitory effect on proton potential in the DCCD-incubated cells. Electron transport complexes NADH dehydrogenase and the bc 1 complex were found to be insensitive to DCCD, suggesting that ATP synthase was the primary target of DCCD. Given the correlation of DIC uptake to the intracellular ATP concentration, the ABC transporter genes were targeted by qRT-PCR, but were not upregulated under low-DIC conditions. As the T. crunogena genome does not include orthologs of any genes encoding known DIC uptake systems, these data suggest that a novel, yet to be identified, ATP- and proton potential-dependent DIC transporter is active in this bacterium. This transporter serves to facilitate growth by T. crunogena and other Thiomicrospiras in the many habitats where they are found.

  18. Strains of the Harmful Cyanobacterium Microcystis aeruginosa Differ in Gene Expression and Activity of Inorganic Carbon Uptake Systems at Elevated CO2 Levels.

    PubMed

    Sandrini, Giovanni; Jakupovic, Dennis; Matthijs, Hans C P; Huisman, Jef

    2015-11-01

    Cyanobacteria are generally assumed to be effective competitors at low CO2 levels because of their efficient CO2-concentrating mechanism (CCM), and yet how bloom-forming cyanobacteria respond to rising CO2 concentrations is less clear. Here, we investigate changes in CCM gene expression at ambient CO2 (400 ppm) and elevated CO2 (1,100 ppm) in six strains of the harmful cyanobacterium Microcystis. All strains downregulated cmpA encoding the high-affinity bicarbonate uptake system BCT1, whereas both the low- and high-affinity CO2 uptake genes were expressed constitutively. Four strains downregulated the bicarbonate uptake genes bicA and/or sbtA, whereas two strains showed constitutive expression of the bicA-sbtA operon. In one of the latter strains, a transposon insert in bicA caused low bicA and sbtA transcript levels, which made this strain solely dependent on BCT1 for bicarbonate uptake. Activity measurements of the inorganic carbon (Ci) uptake systems confirmed the CCM gene expression results. Interestingly, genes encoding the RuBisCO enzyme, structural carboxysome components, and carbonic anhydrases were not regulated. Hence, Microcystis mainly regulates the initial uptake of inorganic carbon, which might be an effective strategy for a species experiencing strongly fluctuating Ci concentrations. Our results show that CCM gene regulation of Microcystis varies among strains. The observed genetic and phenotypic variation in CCM responses may offer an important template for natural selection, leading to major changes in the genetic composition of harmful cyanobacterial blooms at elevated CO2.

  19. Strains of the Harmful Cyanobacterium Microcystis aeruginosa Differ in Gene Expression and Activity of Inorganic Carbon Uptake Systems at Elevated CO2 Levels

    PubMed Central

    Sandrini, Giovanni; Jakupovic, Dennis; Matthijs, Hans C. P.

    2015-01-01

    Cyanobacteria are generally assumed to be effective competitors at low CO2 levels because of their efficient CO2-concentrating mechanism (CCM), and yet how bloom-forming cyanobacteria respond to rising CO2 concentrations is less clear. Here, we investigate changes in CCM gene expression at ambient CO2 (400 ppm) and elevated CO2 (1,100 ppm) in six strains of the harmful cyanobacterium Microcystis. All strains downregulated cmpA encoding the high-affinity bicarbonate uptake system BCT1, whereas both the low- and high-affinity CO2 uptake genes were expressed constitutively. Four strains downregulated the bicarbonate uptake genes bicA and/or sbtA, whereas two strains showed constitutive expression of the bicA-sbtA operon. In one of the latter strains, a transposon insert in bicA caused low bicA and sbtA transcript levels, which made this strain solely dependent on BCT1 for bicarbonate uptake. Activity measurements of the inorganic carbon (Ci) uptake systems confirmed the CCM gene expression results. Interestingly, genes encoding the RuBisCO enzyme, structural carboxysome components, and carbonic anhydrases were not regulated. Hence, Microcystis mainly regulates the initial uptake of inorganic carbon, which might be an effective strategy for a species experiencing strongly fluctuating Ci concentrations. Our results show that CCM gene regulation of Microcystis varies among strains. The observed genetic and phenotypic variation in CCM responses may offer an important template for natural selection, leading to major changes in the genetic composition of harmful cyanobacterial blooms at elevated CO2. PMID:26319871

  20. Acclimation to Very Low CO2: Contribution of Limiting CO2 Inducible Proteins, LCIB and LCIA, to Inorganic Carbon Uptake in Chlamydomonas reinhardtii1[OPEN

    PubMed Central

    Spalding, Martin H.

    2014-01-01

    The limiting-CO2 inducible CO2-concentrating mechanism (CCM) of microalgae represents an effective strategy to capture CO2 when its availability is limited. At least two limiting-CO2 acclimation states, termed low CO2 and very low CO2, have been demonstrated in the model microalga Chlamydomonas reinhardtii, and many questions still remain unanswered regarding both the regulation of these acclimation states and the molecular mechanism underlying operation of the CCM in these two states. This study examines the role of two proteins, Limiting CO2 Inducible A (LCIA; also named NAR1.2) and LCIB, in the CCM of C. reinhardtii. The identification of an LCIA-LCIB double mutant based on its inability to survive in very low CO2 suggests that both LCIA and LCIB are critical for survival in very low CO2. The contrasting effects of individual mutations in LCIB and LCIA compared with the effects of LCIB-LCIA double mutations on growth and inorganic carbon-dependent photosynthetic O2 evolution reveal distinct roles of LCIA and LCIB in the CCM. Although both LCIA and LCIB are essential for very low CO2 acclimation, LCIB appears to function in a CO2 uptake system, whereas LCIA appears to be associated with a HCO3− transport system. The contrasting and complementary roles of LCIA and LCIB in acclimation to low CO2 and very low CO2 suggest a possible mechanism of differential regulation of the CCM based on the inhibition of HCO3− transporters by moderate to high levels of CO2. PMID:25336519

  1. Reactive uptake of N2O5 to internally mixed inorganic and organic particles: the role of organic carbon oxidation state and inferred organic phase separations

    NASA Astrophysics Data System (ADS)

    Gaston, C. J.; Thornton, J. A.; Ng, N. L.

    2014-06-01

    We measured N2O5 reactive uptake onto mixed organic/inorganic submicron particles using organic compounds with a variety of oxidation states (using mainly atomic O : C ratios as a proxy) and molecular weights. The organic mass fraction, organic molecular composition, and relative humidity (RH) were varied to assess their effects separately on the N2O5 uptake coefficient, γ(N2O5). At a constant RH, mixtures of organic components having an O : C < 0.5 with ammonium bisulfate significantly suppressed the uptake of N2O5(g) compared to pure ammonium bisulfate, even at small organic mass fractions (e.g., ≤ 15%). The effect of the organic component became less pronounced at higher RH. In general, highly oxygenated organic components (O : C > 0.8) had a smaller or even negligible impact on N2O5(g) uptake at all RHs probed; however, a few exceptions were observed. Notably, γ(N2O5) for mixtures of ammonium bisulfate with polyethylene glycol (PEG), PEG-300 (O : C = 0.56), decreased nearly linearly as the PEG mass fraction increased at constant RH until leveling off at the value measured for pure PEG. The response of γ(N2O5) to increasing PEG mass fraction was similar to that measured on ambient atmospheric particles as a function of organic mass fraction. The effects of the organic mass fraction on γ(N2O5), for mixtures having an O : C < ~0.8, were best described using a standard resistor model of reactive uptake assuming the particles had an RH-dependent inorganic core-organic shell morphology. This model suggests that the N2O5 diffusivity and/or solubility in the organic layer is up to a factor of 20 lower compared to aqueous solution particles, and that the diffusivity, solubility, and reactivity of N2O5 within organic coatings and particles depend upon both RH and the molecular composition of the organic medium. We use these dependencies and ambient measurements of organic aerosol from the global aerosol mass spectrometry (AMS) database to show that the typical

  2. Expression of a Low CO2–Inducible Protein, LCI1, Increases Inorganic Carbon Uptake in the Green Alga Chlamydomonas reinhardtii[W][OA

    PubMed Central

    Ohnishi, Norikazu; Mukherjee, Bratati; Tsujikawa, Tomoki; Yanase, Mari; Nakano, Hirobumi; Moroney, James V.; Fukuzawa, Hideya

    2010-01-01

    Aquatic photosynthetic organisms can modulate their photosynthesis to acclimate to CO2-limiting stress by inducing a carbon-concentrating mechanism (CCM) that includes carbonic anhydrases and inorganic carbon (Ci) transporters. However, to date, Ci-specific transporters have not been well characterized in eukaryotic algae. Previously, a Chlamydomonas reinhardtii mutant (lcr1) was identified that was missing a Myb transcription factor. This mutant had reduced light-dependent CO2 gas exchange (LCE) activity when grown under CO2-limiting conditions and did not induce the CAH1 gene encoding a periplasmic carbonic anhydrase, as well as two as yet uncharacterized genes, LCI1 and LCI6. In this study, LCI1 was placed under the control of the nitrate reductase promoter, allowing for the induction of LCI1 expression by nitrate in the absence of other CCM components. When the expression of LCI1 was induced in the lcr1 mutant under CO2-enriched conditions, the cells showed an increase in LCE activity, internal Ci accumulation, and photosynthetic affinity for Ci. From experiments using indirect immunofluorescence, LCI1–green fluorescent protein fusions, and cell fractionation procedures, it appears that LCI1 is mainly localized to the plasma membrane. These results provide strong evidence that LCI1 may contribute to the CCM as a component of the Ci transport machinery in the plasma membrane. PMID:20870960

  3. Contrasting modes of inorganic carbon acquisition amongst Symbiodinium (Dinophyceae) phylotypes.

    PubMed

    Brading, Patrick; Warner, Mark E; Smith, David J; Suggett, David J

    2013-10-01

    Growing concerns over ocean acidification have highlighted the need to critically understand inorganic carbon acquisition and utilization in marine microalgae. Here, we contrast these characteristics for the first time between two genetically distinct dinoflagellate species of the genus Symbiodinium (phylotypes A13 and A20) that live in symbiosis with reef-forming corals. Both phylotypes were grown in continuous cultures under identical environmental conditions. Rubisco was measured using quantitative Western blots, and radioisotopic (14) C uptake was used to characterize light- and total carbon dioxide (TCO2 )-dependent carbon fixation, as well as inorganic carbon species preference and external carbonic anhydrase activity. A13 and A20 exhibited similar rates of carbon fixation despite cellular concentrations of Rubisco being approximately four-fold greater in A13. The uptake of CO2 over HCO3 - was found to support the majority of carbon fixation in both phylotypes. However, A20 was also able to indirectly utilize HCO3 - by first converting it to CO2 via external carbonic anhydrase. These results show that adaptive differences in inorganic carbon acquisition have evolved within the Symbiodinium genus, which thus carries fundamental implications as to how this functionally key genus will respond to ocean acidification, but could also represent a key trait factor that influences their productivity when in hospite of their coral hosts. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  4. CO2-dependent carbon isotope fractionation in dinoflagellates relates to their inorganic carbon fluxes.

    PubMed

    Hoins, Mirja; Eberlein, Tim; Van de Waal, Dedmer B; Sluijs, Appy; Reichart, Gert-Jan; Rost, Björn

    2016-08-01

    Carbon isotope fractionation (εp) between the inorganic carbon source and organic matter has been proposed to be a function of pCO2. To understand the CO2-dependency of εp and species-specific differences therein, inorganic carbon fluxes in the four dinoflagellate species Alexandrium fundyense, Scrippsiella trochoidea, Gonyaulax spinifera and Protoceratium reticulatum have been measured by means of membrane-inlet mass spectrometry. In-vivo assays were carried out at different CO2 concentrations, representing a range of pCO2 from 180 to 1200 μatm. The relative bicarbonate contribution (i.e. the ratio of bicarbonate uptake to total inorganic carbon uptake) and leakage (i.e. the ratio of CO2 efflux to total inorganic carbon uptake) varied from 0.2 to 0.5 and 0.4 to 0.7, respectively, and differed significantly between species. These ratios were fed into a single-compartment model, and εp values were calculated and compared to carbon isotope fractionation measured under the same conditions. For all investigated species, modeled and measured εp values were comparable (A. fundyense, S. trochoidea, P. reticulatum) and/or showed similar trends with pCO2 (A. fundyense, G. spinifera, P. reticulatum). Offsets are attributed to biases in inorganic flux measurements, an overestimated fractionation factor for the CO2-fixing enzyme RubisCO, or the fact that intracellular inorganic carbon fluxes were not taken into account in the model. This study demonstrates that CO2-dependency in εp can largely be explained by the inorganic carbon fluxes of the individual dinoflagellates.

  5. (Inorganic carbon surveys of oceanic basins)

    SciTech Connect

    Wilke, R.J.

    1991-04-25

    Measurements were made aboard the F. S. Meteor, along the 19 degree South cruise track of the following chemical parameters: total dissolved inorganic carbon, pH, pCO2, CFC-12, CFC-11, CFC-113, CC14. This was the first cruise of OASD's newly formed CO2 group. The purpose was to survey World Ocean Circulation Experiment (WOCE) line A9 for inorganic carbon for the Department of Energy's Office of CO2 Research. 1 fig.

  6. Ocean uptake of carbon dioxide

    SciTech Connect

    Peng, Tsung-Hung; Takahashi, Taro

    1993-06-01

    Factors controlling the capacity of the ocean for taking up anthropogenic C0{sup 2} include carbon chemistry, distribution of alkalinity, pCO{sup 2} and total concentration of dissolved C0{sup 2}, sea-air pCO{sup 2} difference, gas exchange rate across the sea-air interface, biological carbon pump, ocean water circulation and mixing, and dissolution of carbonate in deep sea sediments. A general review of these processes is given and models of ocean-atmosphere system based on our understanding of these regulating processes axe used to estimate the magnitude of C0{sup 2} uptake by the ocean. We conclude that the ocean can absorb up to 35% of the fossil fuel emission. Direct measurements show that 55% Of C0{sup 2} from fossil fuel burning remains in the atmosphere. The remaining 10% is not accounted for by atmospheric increases and ocean uptake. In addition, it is estimated that an amount equivalent to 30% of recent annual fossil fuel emissions is released into the atmosphere as a result of deforestation and farming. To balance global carbon budget, a sizable carbon sink besides the ocean is needed. Storage of carbon in terrestrial biosphere as a result of C0{sup 2} fertilization is a potential candidate for such missing carbon sinks.

  7. Ocean uptake of carbon dioxide

    SciTech Connect

    Peng, Tsung-Hung ); Takahashi, Taro . Lamont-Doherty Earth Observatory)

    1993-01-01

    Factors controlling the capacity of the ocean for taking up anthropogenic C0[sup 2] include carbon chemistry, distribution of alkalinity, pCO[sup 2] and total concentration of dissolved C0[sup 2], sea-air pCO[sup 2] difference, gas exchange rate across the sea-air interface, biological carbon pump, ocean water circulation and mixing, and dissolution of carbonate in deep sea sediments. A general review of these processes is given and models of ocean-atmosphere system based on our understanding of these regulating processes axe used to estimate the magnitude of C0[sup 2] uptake by the ocean. We conclude that the ocean can absorb up to 35% of the fossil fuel emission. Direct measurements show that 55% Of C0[sup 2] from fossil fuel burning remains in the atmosphere. The remaining 10% is not accounted for by atmospheric increases and ocean uptake. In addition, it is estimated that an amount equivalent to 30% of recent annual fossil fuel emissions is released into the atmosphere as a result of deforestation and farming. To balance global carbon budget, a sizable carbon sink besides the ocean is needed. Storage of carbon in terrestrial biosphere as a result of C0[sup 2] fertilization is a potential candidate for such missing carbon sinks.

  8. Oceanic Uptake of Fossil Fuel CO2: Carbon-13 Evidence.

    PubMed

    Quay, P D; Tilbrook, B; Wong, C S

    1992-04-03

    The delta(13)C value of the dissolved inorganic carbon in the surface waters of the Pacific Ocean has decreased by about 0.4 per mil between 1970 and 1990. This decrease has resulted from the uptake of atmospheric CO(2) derived from fossil fuel combustion and deforestation. The net amounts of CO(2) taken up by the oceans and released from the biosphere between 1970 and 1990 have been determined from the changes in three measured values: the concentration of atmospheric CO(2), the delta(13)C of atmospheric CO(2) and the delta(13)C value of dissolved inorganic carbon in the ocean. The calculated average net oceanic CO(2) uptake is 2.1 gigatons of carbon per year. This amount implies that the ocean is the dominant net sink for anthropogenically produced CO(2) and that there has been no significant net CO(2) released from the biosphere during the last 20 years.

  9. Substantial global carbon uptake by cement carbonation

    NASA Astrophysics Data System (ADS)

    Xi, Fengming; Davis, Steven J.; Ciais, Philippe; Crawford-Brown, Douglas; Guan, Dabo; Pade, Claus; Shi, Tiemao; Syddall, Mark; Lv, Jie; Ji, Lanzhu; Bing, Longfei; Wang, Jiaoyue; Wei, Wei; Yang, Keun-Hyeok; Lagerblad, Björn; Galan, Isabel; Andrade, Carmen; Zhang, Ying; Liu, Zhu

    2016-12-01

    Calcination of carbonate rocks during the manufacture of cement produced 5% of global CO2 emissions from all industrial process and fossil-fuel combustion in 2013. Considerable attention has been paid to quantifying these industrial process emissions from cement production, but the natural reversal of the process--carbonation--has received little attention in carbon cycle studies. Here, we use new and existing data on cement materials during cement service life, demolition, and secondary use of concrete waste to estimate regional and global CO2 uptake between 1930 and 2013 using an analytical model describing carbonation chemistry. We find that carbonation of cement materials over their life cycle represents a large and growing net sink of CO2, increasing from 0.10 GtC yr-1 in 1998 to 0.25 GtC yr-1 in 2013. In total, we estimate that a cumulative amount of 4.5 GtC has been sequestered in carbonating cement materials from 1930 to 2013, offsetting 43% of the CO2 emissions from production of cement over the same period, not including emissions associated with fossil use during cement production. We conclude that carbonation of cement products represents a substantial carbon sink that is not currently considered in emissions inventories.

  10. Inorganic Carbon Accumulation by Chlamydomonas reinhardtii1

    PubMed Central

    Manuel, Livingston J.; Moroney, James V.

    1988-01-01

    When the unicellular green alga Chlamydomonas reinhardtii is placed under low CO2 conditions it adapts by making an inorganic carbon accumulating mechanism. Algal cells were labeled with 35SO4−2 during this adaptation period and labeled proteins specific for this low CO2 adaptation were identified. Four major proteins were preferentially synthesized under low CO2 conditions and had Mr of 46, 44, 37, and 20 kilodaltons. The 37 kilodalton protein is most likely the periplasmic carbonic anhydrase previously identified as being part of the inorganic carbon accumulation mechanism of C. reinhardtii. The other three proteins have not been identified. The 46 and the 44 kilodalton proteins were not synthesized by a mutant algal strain, pmp-1, which cannot grow at low CO2 concentrations. This strain does make the 37 and 20 kilodalton proteins, however. These data suggest that at least two or three proteins in addition to the periplasmic carbonic anhydrase are part of the inorganic carbon accumulation mechanism in C. reinhardtii. Images Fig. 1 Fig. 2 Fig. 3 Fig. 4 Fig. 5 Fig. 6 PMID:16666333

  11. Simulating the effects of light intensity and carbonate system composition on particulate organic and inorganic carbon production in Emiliania huxleyi.

    PubMed

    Holtz, Lena-Maria; Wolf-Gladrow, Dieter; Thoms, Silke

    2015-05-07

    Coccolithophores play an important role in the marine carbon cycle. Variations in light intensity and external carbonate system composition alter intracellular carbon fluxes and therewith the production rates of particulate organic and inorganic carbon. Aiming to find a mechanistic explanation for the interrelation between dissolved inorganic carbon fluxes and particulate carbon production rates, we develop a numerical cell model for Emiliania huxleyi, one of the most abundant coccolithophore species. The model consists of four cellular compartments, for each of which the carbonate system is resolved dynamically. The compartments are connected to each other and to the external medium via substrate fluxes across the compartment-confining membranes. By means of the model we are able to explain several pattern observed in particulate organic and inorganic carbon production rates for different strains and under different acclimation conditions. Particulate organic and inorganic carbon production rates for instance decrease at very low external CO2 concentrations. Our model suggests that this effect is caused mainly by reduced HCO3(-) uptake rates, not by CO2 limitation. The often observed decrease in particulate inorganic carbon production rates under Ocean Acidification is explained by a downregulation of cellular HCO3(-) uptake. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  12. 75 FR 29534 - Inorganic Nitrates-Nitrite, Carbon and Carbon Dioxide, and Sulfur Registration Review; Draft...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-26

    ... Nitrates-Nitrite, Carbon and Carbon Dioxide, and Sulfur Registration Review; Draft Ecological Risk... inorganic nitrates- nitrites, carbon and carbon dioxide uses, as well as gas cartridge uses of sulfur. The... registration review of inorganic nitrates - nitrites, carbon and carbon dioxide, and sulfur pursuant to section...

  13. Carbon isotopic exchange between dissolved inorganic and organic carbon

    NASA Astrophysics Data System (ADS)

    Thomas, B.; Freeman, K. H.; House, C. H.; Arthur, M. A.

    2009-12-01

    The pools of inorganic and organic carbon are often considered to be separate and distinct. Isotopic exchange between the inorganic and organic carbon pools in natural waters is rarely considered plausible at low temperatures owing to kinetic barriers to exchange. In certain circumstances, however carboxyl carbon of dissolved organic matter (DOM) may be subject to exchange with the dissolved inorganic carbon (DIC) pool. We report results from an isotopic labeling experiment that resulted in rapid methanogen-catalyzed isotopic exchange between DIC and the carboxyl carbon of acetate. This exchange rapidly mixes the isotopic composition of the DIC pool into the dissolved organic carbon (DOC) acetate pool. This exchange is likely associated with the reversible nature of the carbon monoxide dehydrogenase enzyme. In nature, many decarboxylase enzymes are also reversible and some can be shown to facilitate similar exchange reactions. Those decarboxylase enzymes that are important in lignin decomposition and other organic carbon (OC) transformations may help to mask the isotopic composition of the precursor DOC with as much as 15% contribution from DIC. Though this dilution is unlikely to matter in soils where DOC and DIC are similar in composition, this exchange may be extremely important in systems where the stable or radioisotope composition of DOC and DIC differ significantly. As an example of the importance of this effect, we demonstrate that the stable and radiocarbon isotopic composition of fluvial DOC could be altered by mixing with marine DIC to produce a DOC composition similar to those observed in the deep marine DOC pool. We hypothesize that this exchange resolves the conundrum of apparently old (>5 kyr) marine-derived DOC. If most of the carboxyl carbon of pre-aged, terrestrial-derived DOC (15% of total carbon) is subject to exchange with marine DIC, the resulting carbon isotopic composition of deep DOC will be similar to that observed in deep marine studies

  14. Carbon dioxide removal with inorganic membranes

    SciTech Connect

    Judkins, R.R.; Fain, D.E.

    1993-12-31

    The increasing concentrations of greenhouse gases, particularly carbon dioxide, in the atmosphere has sparked a great deal of interest in the removal of CO{sub 2} from flue gases of fossil fueled plants. Presently, several techniques for the removal of CO{sub 2} are considered to have potential, but are lacking in practicality. For example, amine scrubbing of flue gas streams is potential, but are lacking in practically. For example, amine scrubbing of flue gas streams is effective in removing CO{sub 2}, but costs are high; efficiency suffers; and other acid gases must be removed prior to amine stripping. Membrane systems for CO{sub 2} removal are held in high regard, and inorganic, particularly ceramic, membranes offer the potential for high temperature, thus energy saving, removal.

  15. In situ spectrophotometric measurement of dissolved inorganic carbon in seawater

    USGS Publications Warehouse

    Liua, Xuewu; Byrne, Robert H.; Adornato, Lori; Yates, Kimberly K.; Kaltenbacher, Eric; Ding, Xiaoling; Yang, Bo

    2013-01-01

    Autonomous in situ sensors are needed to document the effects of today’s rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accuracy and resolution. SEAS-DIC is a new in situ instrument designed to provide calibrated, high-frequency, long-term measurements of DIC in marine and fresh waters. Sample water is first acidified to convert all DIC to carbon dioxide (CO2). The sample and a known reagent solution are then equilibrated across a gas-permeable membrane. Spectrophotometric measurement of reagent pH can thereby determine the sample DIC over a wide dynamic range, with inherent calibration provided by the pH indicator’s molecular characteristics. Field trials indicate that SEAS-DIC performs well in biofouling and turbid waters, with a DIC accuracy and precision of ∼2 μmol kg–1 and a measurement rate of approximately once per minute. The acidic reagent protects the sensor cell from biofouling, and the gas-permeable membrane excludes particulates from the optical path. This instrument, the first spectrophotometric system capable of automated in situ DIC measurements, positions DIC to become a key parameter for in situ CO2-system characterizations.

  16. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2012-04-01

    Soil-borne amino acids may constitute a source of nitrogen (N) for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and ammonium (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake, thereby resulting in similar total N uptake rates. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were generally about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50% of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic N.

  17. Analytical electron microscopy of biogenic and inorganic carbonates

    NASA Technical Reports Server (NTRS)

    Blake, David F.

    1989-01-01

    In the terrestrial sedimentary environment, the mineralogically predominant carbonates are calcite-type minerals (rhombohedral carbonates) and aragonite-type minerals (orthorhombic carbonates). Most common minerals precipitating either inorganically or biogenically are high magnesium calcite and aragonite. High magnesium calcite (with magnesium carbonate substituting for more than 7 mole percent of the calcium carbonate) is stable only at temperatures greater than 700 C or thereabouts, and aragonite is stable only at pressures exceeding several kilobars of confining pressure. Therefore, these carbonates are expected to undergo chemical stabilization in the diagenetic environment to ultimately form stable calcite and dolomite. Because of the strong organic control of carbonate deposition in organisms during biomineralization, the microchemistry and microstructure of invertebrate skeletal material is much different than that present in inorganic carbonate cements. The style of preservation of microstructural features in skeletal material is therefore often quite distinctive when compared to that of inorganic carbonate even though wholesale recrystallization of the sediment has taken place. Microstructural and microchemical comparisons are made between high magnesium calcite echinoderm skeletal material and modern inorganic high magnesium calcite inorganic cements, using analytical electron microscopy and related techniques. Similar comparisons are made between analogous materials which have undergone stabilization in the diagenetic environment. Similar analysis schemes may prove useful in distinguishing between biogenic and inorganic carbonates in returned Martian carbonate samples.

  18. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2011-11-01

    Soil-borne amino acids may constitute a nitrogen (N) source for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50 % of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic nitrogen.

  19. Storage of Organic and Inorganic Carbon in Human Settlements

    NASA Astrophysics Data System (ADS)

    Churkina, G.

    2009-12-01

    It has been shown that urban areas have carbon density comparable with tropical forest. Carbon density of urban areas may be even higher, because the density of organic carbon only was taking into account. Human settlements store carbon in two forms such as organic and inorganic. Carbon is stored in organic form in living biomass such as trees, grasses or in artifacts derived from biomass such as wooden furniture, building structures, paper, clothes and shoes made from natural materials. Inorganic carbon or fossil carbon, meanwhile, is primarily stored in objects fabricated by people like concrete, plastic, asphalt, and bricks. The key difference between organic and inorganic forms of carbon is how they return to the gaseous state. Organic carbon can be returned to the atmosphere without applying additional artificial energy through decomposition of organic matter, whereas energy input such as burning is needed to release inorganic carbon. In this study I compare inorganic with organic carbon storage, discuss their carbon residence time, decomposition rates, and possible implications for carbon emissions.

  20. Decadal Changes in Pacific Ocean Inorganic Carbon Inventory

    NASA Astrophysics Data System (ADS)

    Sabine, C. L.; Feely, R. A.; Millero, F. J.; Dickson, A.; Mecking, S.; Wanninkhof, R.; Greeley, D.

    2006-12-01

    The primary goal of the CLIVAR/CO2 Repeat Hydrography Program is to quantify the ocean's role in sequestering anthropogenic CO2 and the effects of natural variability and climate change on marine ecosystems and biogeochemistry. The Pacific Ocean plays a unique role in the ocean carbon cycle because it is the final destination of deep waters containing high levels of preformed nutrients and dissolved inorganic carbon (DIC) and because of the way that Pacific circulation affects the transport and storage of anthropogenic CO2. Discrete high-quality DIC and total alkalinity data were acquired as part of the WOCE/JGOFS global CO2 survey cruises in the early 1990s. Hydrographic survey cruises conducted as part of the CLIVAR/CO2 Repeat Hydrography Program recently reoccupied the east-west P2 line along 30°N in 2004 and the north-south P16 line along 152°W in 2005 and 2006. DIC increases since WOCE/JGOFS were about 10-15 μmol kg-1 in shallow waters along these lines, but not all of the observed changes can be attributed to anthropogenic CO2 uptake from the atmosphere. We discuss approaches for separating out the anthropogenic CO2 uptake signal from the effects of variability in local circulation and potential changes in new production and/or remineralization along the flow path. Results suggest that the average annual uptake of anthropogenic CO2 in the mixed layer of the Pacific over the last decade has been about 1 μmol kg-1 yr-1, roughly consistent with the increases observed in atmospheric CO2 over this period.

  1. Gravimetric Determination of Inorganic Carbon in Calcareous Soils Using the Carbonate-Meter

    USDA-ARS?s Scientific Manuscript database

    Organic carbon affects many important physical, chemical and microbiological soil properties. In calcareous soils, the inorganic carbon has to be measured and subtracted from the total carbon to obtain organic carbon. Our objective was to develop a gravimetric technique to quantify inorganic carbon ...

  2. Substantial inorganic carbon sink in closed drainage basins globally

    NASA Astrophysics Data System (ADS)

    Li, Yu; Zhang, Chengqi; Wang, Naiang; Han, Qin; Zhang, Xinzhong; Liu, Yuan; Xu, Lingmei; Ye, Wangting

    2017-07-01

    Arid and semi-arid ecosystems are increasingly recognized as important carbon storage sites. In these regions, extensive sequestration of dissolved inorganic carbon can occur in the terminal lakes of endorheic basins--basins that do not drain to external bodies of water. However, the global magnitude of this dissolved inorganic carbon sink is uncertain. Here we present isotopic, radiocarbon, and chemical analyses of groundwater, river water, and sediments from the terminal region of the endorheic Shiyang River drainage basin, in arid northwest China. We estimate that 0.13 Pg of dissolved inorganic carbon was stored in the basin during the mid-Holocene. Pollen-based reconstructions of basin-scale productivity suggest that the mid-Holocene dissolved inorganic carbon sink was two orders of magnitude smaller than terrestrial productivity in the basin. We use estimates of dissolved inorganic carbon storage based on sedimentary data from 11 terminal lakes of endorheic basins around the world as the basis for a global extrapolation of the sequestration of dissolved organic carbon in endorheic basins. We estimate that 0.152 Pg of dissolved inorganic carbon is buried per year today, compared to about 0.211 Pg C yr-1 during the mid-Holocene. We conclude that endorheic basins represent an important carbon sink on the global scale, with a magnitude similar to deep ocean carbon burial.

  3. Global carbon uptake by cement carbonation

    NASA Astrophysics Data System (ADS)

    Davis, S. J.; Xi, F.; Liu, Z.; Ciais, P.; Crawford-Brown, D.; Guan, D.; Pade, C.; Shi, T.; Syddall, M.; Lv, J.; Ji, L.; Bing, L.; Wang, J.; Wei, W.; Yang, K. H.; Lagerblad, B.; Galan, I.; Andrade, C.; Zhang, Y.

    2016-12-01

    Calcination of carbonate rocks during the manufacture of cement produced emissions equivalent to 5% of global fossil CO2 emissions in 2013. Considerable attention has been paid to quantifying these industrial process emissions from cement production, but the natural reversal of the process—carbonation, has received almost no attention in carbon cycle studies. Here, we show carbonation of cement materials over their life cycle represents a large and growing net sink of CO2 (0.10 GtC y-1 in 1998 to 0.25 GtC y-1 in 2013). In total, we estimate that a cumulative amount of 4.5 GtC (2.8-7.5, p=0.05) has been sequestered in carbonating cement materials from 1930 to 2013, offsetting 43% of the process CO2 emissions from production of cement (excluding those from related fossil energy inputs) over the same period. The emissions inventories prepared using IPCC guidelines and used by recent carbon cycle studies are thus missing a substantial carbon sink.

  4. DOES DISSOLVED INORGANIC CARBON PLAY A ROLE IN ARSENIC MOBILIZATION?

    EPA Science Inventory

    Recent experimental results provide evidence that dissolved inorganic carbon plays a direct role in mobilizing arsenic in anoxic aquatic environments. This hypothesis is partially supported by observed correlations between elevated levels of arsenic and alkalinity in a ground wa...

  5. Incorporation of inorganic carbon by Antarctic cryptoendolithic fungi

    NASA Technical Reports Server (NTRS)

    Palmer, R. J. Jr; Friedmann, E. I.

    1988-01-01

    Fungi isolated from the cryptoendolithic community of the Ross Desert are capable of fixing inorganic carbon. Results suggest that lichen mycobionts and parasymbionts are adapted to different water regimes in the cryptoendolithic environment.

  6. Incorporation of inorganic carbon by Antarctic cryptoendolithic fungi.

    PubMed

    Palmer, R J; Friedmann, E I

    1988-01-01

    Fungi isolated from the cryptoendolithic community of the Ross Desert are capable of fixing inorganic carbon. Results suggest that lichen mycobionts and parasymbionts are adapted to different water regimes in the cryptoendolithic environment.

  7. Incorporation of inorganic carbon by Antarctic cryptoendolithic fungi

    NASA Technical Reports Server (NTRS)

    Palmer, R. J. Jr; Friedmann, E. I.

    1988-01-01

    Fungi isolated from the cryptoendolithic community of the Ross Desert are capable of fixing inorganic carbon. Results suggest that lichen mycobionts and parasymbionts are adapted to different water regimes in the cryptoendolithic environment.

  8. Quantifying uncertainty in future ocean carbon uptake

    NASA Astrophysics Data System (ADS)

    Dunne, John P.

    2016-10-01

    Attributing uncertainty in ocean carbon uptake between societal trajectory (scenarios), Earth System Model construction (structure), and inherent natural variation in climate (internal) is critical to make progress in identifying, understanding, and reducing those uncertainties. In the present issue of Global Biogeochemical Cycles, Lovenduski et al. (2016) disentangle these drivers of uncertainty in ocean carbon uptake over time and space and assess the resulting implications for the emergence timescales of structural and scenario uncertainty over internal variability. Such efforts are critical for establishing realizable and efficient monitoring goals and prioritizing areas of continued model development. Under recently proposed climate stabilization targets, such efforts to partition uncertainty also become increasingly critical to societal decision-making in the context of carbon stabilization.

  9. Luminal and basolateral mechanisms involved in the renal tubular uptake of inorganic mercury

    SciTech Connect

    Zalups, R.K.; Minor, K.H.

    1995-09-01

    The present study provides evidence for the existence of both a luminal and a basolateral mechanism involved in the renal tubular uptake of inorganic mercury. The researchers compared the disposition of inorganic mercury in groups of surgical control rats, rats that underwent a unilateral ureteral ligation, and rats that underwent a bilateral ureteral ligation that were pretreated with either normal saline or a 7.5 mmol/kg intravenous dose of PAH 5 min prior to receiving a nontoxic 0.5-{mu}mol/kg intravenous dose of mercuric chloride. The {open_quotes}stop-flow{close_quotes} conditions induced by either unilateral or bilateral ureteral ligation caused a significant reduction in the uptake and content of mercury in the kidneys (whose ureter was ligated) both at 1 h and 24 h after the intravenous injection of the nontoxic dose of mercuric chloride. This decreased renal uptake of mercury was due specifically to decreased uptake of mercury in the renal cortex and outer stripe of the outer medulla. The amount of mercury has not taken up during ureteral ligation represents the portion of mercury that is presumably taken up by a luminal mechanism. Pretreatment with PAH also caused a significant reduction in the renal uptake of mercury in the cortex and outer stripe of the outer medulla. When either unilateral or bilateral ureteral ligation was combined with PAH pretreatment, an additive inhibitory effect occurred with respect to the renal uptake of mercury. In fact, the renal uptake of mercury was reduced by approximately 85% at 1 h after the injection of mercuric chloride. Since the luminal uptake of mercury was blocked by ureteral ligation, the effect of PAH on the renal uptake of mercury must have occurred at the basolateral membrane. Two distinct mechanisms are involved in mercury uptake, with one mechanism located on the luminal membrane and another located on the basolateral membrane. 22 refs., 11 figs., 2 tabs.

  10. Microbial uptake of dissolved organic and inorganic nitrogen in Randers Fjord

    NASA Astrophysics Data System (ADS)

    Veuger, Bart; Middelburg, Jack J.; Boschker, Henricus T. S.; Nieuwenhuize, Joop; van Rijswijk, Pieter; Rochelle-Newall, Emma J.; Navarro, Nuria

    2004-11-01

    Uptake of 15N labeled NH 4+, NO 3-, urea and dissolved free amino acids (DFAA) was measured in April and August 2001 at 6 stations along the salinity gradient of Randers Fjord (Denmark) in order to clarify the relative importance of dissolved organic and inorganic nitrogen (DON and DIN) as N sources for the estuarine planktonic microbial community. Although microbial N uptake was generally dominated by DIN (especially NH 4+), DON (both urea and DFAA) also served as an important N source and occasionally dominated uptake. Uptake of 15N labeled algal derived DON was measured in an attempt to mimic uptake of the complex ambient DON pool. Uptake rates for the algal derived DON in April were similar to those for NH 4+ and even higher than the summed uptake of NH 4+, NO 3-, urea and DFAA in August, suggesting that DON other than urea and DFAA, likely dissolved combined amino acids (DCAA), also served as an important N source. In addition, the relative contributions of heterotrophic bacteria and phytoplankton to total microbial N uptake was estimated from bacterial productivity and measured by inhibiting bacterial N uptake with antibiotics.

  11. Uptake of inorganic phosphate is a limiting factor for Saccharomyces cerevisiae during growth at low temperatures.

    PubMed

    Vicent, Isabel; Navarro, Alfonso; Mulet, Jose M; Sharma, Sukesh; Serrano, Ramón

    2015-05-01

    The fermenting ability of Saccharomyces at low temperatures is crucial for the development of alcoholic beverages, but the key factors for the cold tolerance of yeast are not well known. In this report, we present the results of a screening for genes able to confer cold tolerance by overexpression in a laboratory yeast strain auxotrophic for tryptophan. We identified genes of tryptophan permeases (TAT1 and TAT2), suggesting that the first limiting factor in the growth of tryptophan auxotrophic yeast at low temperatures is tryptophan uptake. This fact is of little relevance to industrial strains which are prototrophic for tryptophan. Then, we screened for genes able to confer growth at low temperatures in tryptophan-rich media and found several genes related to phosphate uptake (PHO84, PHO87, PHO90 and GTR1). This suggests that without tryptophan limitation, uptake of inorganic phosphate becomes the limiting factor. We have found that overexpression of the previously uncharacterized ORF YCR015c/CTO1 increases the uptake of inorganic phosphate. Also, genes involved in ergosterol biosynthesis (NSG2) cause improvement of growth at 10°C, dependent on tryptophan uptake, while the gluconeogenesis gene PCK1 and the proline biosynthesis gene PRO2 cause an improvement in growth at 10°C, independent of tryptophan and phosphate uptake. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Comparison of inorganic nitrogen uptake dynamics following snowmelt and at peak biomass in subalpine grasslands

    NASA Astrophysics Data System (ADS)

    Legay, N.; Grassein, F.; Robson, T. M.; Personeni, E.; Bataillé, M.-P.; Lavorel, S.; Clément, J.-C.

    2013-11-01

    Subalpine grasslands are highly seasonal environments and likely subject to strong variability in nitrogen (N) dynamics. Plants and microbes typically compete for N acquisition during the growing season and particularly at plant peak biomass. During snowmelt, plants could potentially benefit from a decrease in competition by microbes, leading to greater plant N uptake associated with active growth and freeze-thaw cycles restricting microbial growth. In managed subalpine grasslands, we expect these interactions to be influenced by recent changes in agricultural land use, and associated modifications in plant and microbial communities. At several subalpine grasslands in the French Alps, we added pulses of 15N to the soil at the end of snowmelt, allowing us to compare the dynamics of inorganic N uptake in plants and microbes during this period with that previously reported at the peak biomass in July. In all grasslands, while specific shoot N translocation (per g of biomass) of dissolved inorganic nitrogen (DIN) was two to five times greater at snowmelt than at peak biomass, specific microbial DIN uptakes were similar between the two sampling dates. On an area basis, plant communities took more DIN than microbial communities at the end of snowmelt when aboveground plant biomasses were at least two times lower than at peak biomass. Consequently, inorganic N partitioning after snowmelt switches in favor of plant communities, allowing them to support their growing capacities at this period of the year. Seasonal differences in microbial and plant inorganic N-related dynamics were also affected by past (terraced vs. unterraced) rather than current (mown vs. unmown) land use. In terraced grasslands, microbial biomass N remained similar across seasons, whereas in unterraced grasslands, microbial biomass N was higher and microbial C : N lower at the end of snowmelt as compared to peak biomass. Further investigations on microbial community composition and their organic N

  13. Elevated CO2 increases plant uptake of organic and inorganic N in the desert shrub Larrea tridentata.

    PubMed

    Jin, Virginia L; Evans, R D

    2010-05-01

    Resource limitations, such as the availability of soil nitrogen (N), are expected to constrain continued increases in plant productivity under elevated atmospheric carbon dioxide (CO(2)). One potential but under-studied N source for supporting increased plant growth under elevated CO(2) is soil organic N. In arid ecosystems, there have been no studies examining plant organic N uptake to date. To assess the potential effects of elevated atmospheric CO(2) on plant N uptake dynamics, we quantified plant uptake of organic and inorganic N forms in the dominant desert shrub Larrea tridentata under controlled environmental conditions. Seedlings of L. tridentata were grown in the Mojave Desert (NV, USA) soils that had been continuously exposed to ambient or elevated atmospheric CO(2) for 8 years at the Nevada Desert FACE Facility. After 6 months of growth in environmentally controlled chambers under ambient (380 micromol mol(-1)) or elevated (600 micromol mol(-1)) CO(2), pots were injected with stable isotopically labeled sole-N sources ((13)C-[2]-(15)N glycine, (15)NH(4) (+), or (15)NO(3) (-)) and moved back to their respective chambers for the remainder of the study. Plants were destructively harvested at 0, 2, 10, 24, and 49 days. Plant uptake of soil N derived from glycine, NH(4) (+), and NO(3) (-) increased under elevated CO(2) at days 2 and 10. Further, root uptake of organic N as glycine occurred as intact amino acid within the first hour after N treatment, indicated by approximately 1:1 M enrichment ratios of (13)C:(15)N. Plant N uptake responses to elevated CO(2) are often species-specific and could potentially shift competitive interactions between co-occurring species. Thus, physiological changes in root N uptake dynamics coupled with previously observed changes in the availability of soil N resources could impact plant community structure as well as ecosystem nutrient cycling under increasing atmospheric CO(2) levels in the Mojave Desert.

  14. Measurements of uptake coefficients for heterogeneous loss of HO2 onto submicron inorganic salt aerosols.

    PubMed

    George, I J; Matthews, P S J; Whalley, L K; Brooks, B; Goddard, A; Baeza-Romero, M T; Heard, D E

    2013-08-21

    Laboratory studies were conducted to investigate the kinetics of HO2 radical uptake onto submicron inorganic salt aerosols. HO2 reactive uptake coefficients were measured at room temperature using an aerosol flow tube and the Fluorescence Assay by Gas Expansion (FAGE) technique that allowed for measurements to be conducted under atmospherically relevant HO2 concentrations ([HO2] = 10(8) to 10(9) molecule cm(-3)). The uptake coefficient for HO2 uptake onto dry inorganic salt aerosols was consistently below the detection limit (γ(HO2) < 0.004). The mass accommodation coefficient of HO2 radicals onto Cu(II)-doped (NH4)2SO4 aerosols was measured to be α(HO2) = 0.4 ± 0.3 representing the kinetic upper limit to γ. For aqueous (NH4)2SO4, NaCl and NH4NO3 aerosols not containing traces of transition metal ions, a range of γ(HO2) = 0.003-0.02 was measured. These values were much lower than γ values previously measured on aqueous (NH4)2SO4 and NaCl aerosols and also those typically used in atmospheric models (γ(HO2) = 0.1-1.0). Evidence is presented showing that the HO2 uptake coefficients onto aqueous salt aerosol particles are dependent both on the exposure time to the aerosol and on the HO2 concentration used.

  15. Influence of Cd, Co, and Zn on inorganic carbon acquisition and carbon metabolism in Emiliania huxleyi.

    NASA Astrophysics Data System (ADS)

    Sutton, J. N.; Boye, M.; De La Broise, D.; Probert, I.

    2014-12-01

    Trace elements are essential micronutrients for primary producers; hence they influence the global carbon cycle and contribute to the regulation of Earth's climate. Over the past 25 years, the influence of Fe concentration on phytoplankton production has been well studied and this research has been instrumental in our understanding of the influence that biology has on the sequestration of atmospheric CO2. However, other trace elements that are directly involved in carbon metabolism by primary producers, such as Zn, Cd, and Co, have received less attention. We examined the physiological response of two strains of Emiliania huxleyi to a range of realistic trace element concentrations (Zn, Cd, Co) in the marine environment under batch, semi-continuous, and continuous culture conditions. In addition, the continuous culture system was maintained at a pH of 8.15 ±0.02 by a sensor and regulator-controlled CO2­ injection system. The results from this study will highlight the influence that trace element composition of seawater has on the growth rate, elemental quota, inorganic carbon uptake, and carbon metabolism of Emiliania huxleyi. Potential limitations for the interpretation of paleo-productivity records will be discussed.

  16. Inorganic ammonium salts and carbonate salts are efficient catalysts for aldol condensation in atmospheric aerosols.

    PubMed

    Nozière, Barbara; Dziedzic, Pawel; Córdova, Armando

    2010-04-21

    In natural environments such as atmospheric aerosols, organic compounds coexist with inorganic salts but, until recently, were not thought to interact chemically. We have recently shown that inorganic ammonium ions, NH(4)(+), act as catalysts for acetal formation from glyoxal, a common atmospheric gas. In this work, we report that inorganic ammonium ions, NH(4)(+), and carbonate ions, CO(3)(2-), are also efficient catalysts for the aldol condensation of carbonyl compounds. In the case of NH(4)(+) this was not previously known, and was patented prior to this article. The kinetic results presented in this work show that, for the concentrations of ammonium and carbonate ions present in tropospheric aerosols, the aldol condensation of acetaldehyde and acetone could be as fast as in concentrated sulfuric acid and might compete with their reactions with OH radicals. These catalytic processes could produce significant amounts of polyconjugated, light-absorbing compounds in aerosols, and thus affect their direct forcing on climate. For organic gases with large Henry's law coefficients, these reactions could also result in a significant uptake and in the formation of secondary organic aerosols (SOA). This work reinforces the recent findings that inorganic salts are not inert towards organic compounds in aerosols and shows, in particular, that common ones, such as ammonium and carbonate salts, might even play important roles in their chemical transformations.

  17. Carbonyl Sulfide: An Inhibitor of Inorganic Carbon Transport in Cyanobacteria 1

    PubMed Central

    Ogawa, Teruo; Togasaki, Robert K.

    1988-01-01

    Cells of a high CO2-requiring mutant (E1) and wild type of Synechococcus PCC7942 were incubated with COS in the light, then suspended in COS-free medium and their CO2 exchange was measured using an open gas-analysis system under the conditions where photosynthetic CO2 fixation is inhibited. When the suspension of cells untreated with COS was illuminated, the rate of CO2 uptake was high and addition of carbonic anhydrase during illumination released a large amount of CO2 from the medium into the gas phase. The COS treatment in the light markedly reduced the rate of CO2 uptake by the cells and the amount of CO2 released by carbonic anhydrase. Incubation of cells with COS in the dark had no effect on the CO2-exchange profile. The COS concentration required for 50% inhibition of CO2 uptake was about 25 micromolar when the concentration of inorganic carbon (Ci) in the medium was 60 micromolar; higher Ci concentrations reduced the inhibitory effect of COS. Measurement of Ci uptake in E1 cells by a silicone oil centrifugation method also indicated marked reduction of the activities of 14CO2 and H14CO3− uptake in the cells treated with COS in the light. The results demonstrated that COS is a potent inhibitor of Ci transport. PMID:16666387

  18. [Effects of excessive inorganic nitrogen on inorganic carbon system in seawater simulated experiments].

    PubMed

    Zhang, Nai-xing; Song, Jin-ming; He, Zhi-peng; Zheng, Guo-xia; Zhang, Peng; Xu, Ya-yan

    2008-06-01

    The influence of excessive inorganic nitrogen (NO3-, NH4+, NO2-) on the pH, inorganic carbon system and air-sea CO2 flux was studied in laboratory seawater simulation experiments. The result indicates that the excessive inorganic nitrogen significantly has an important influence on the inorganic carbon system in all conditions. At the NO3- addition groups, HCO3- and p (CO2) increase while pH and CO3(2-) decrease when the concentration of NO3- < or = 37.60 micromol x L(-1). But high concentrations > or = 188 micromol x L(-1) is just the reverse. The seawater changes from carbon source to carbon sink of atmospheric CO2 with NO3- addition increased. At the NH4+ addition groups, HCO3- and p (CO2) decrease while pH and CO3(2-) increase when the concentration of NH4+ < or = 25.20 micromol x L(-1). However, when the concentration of NH4+ > or = 126 micromol x L(-1), the concentrations of HCO3- and p (CO2) increase with NH4+ addition and the seawater changes from carbon sink to carbon source of atmospheric CO2 and the intensity of carbon source has a positive relationship with the concentration of NH4+. At the NO2- addition groups, the concentrations of HCO3- and p (CO2) decrease while pH and CO3(2-) increase with time scale and the seawater acts as a strong carbon sink with NO2- addition of 7.90 micromol x L(-1). While at the other NO2- concentration levels, the carbon sink is weak in seawater. The Chl-a concentration of nutrient addition groups compared with control (delta Chl-a) shows a significant negative correlation with delta p (CO2) (r = -0.87, p < 0.000 1, n = 16). The main controlling factor to the variation of inorganic carbon system is the adaptation of phytoplankton to different form and concentration of nitrogen.

  19. Solute-specific scaling of inorganic nitrogen and phosphorus uptake in streams

    NASA Astrophysics Data System (ADS)

    Hall, R. O., Jr.; Baker, M. A.; Rosi-Marshall, E. J.; Tank, J. L.; Newbold, J. D.

    2013-11-01

    Stream ecosystem processes such as nutrient cycling may vary with stream position in the network. Using a scaling approach, we examined the relationship between stream size and nutrient uptake length, which represents the mean distance that a dissolved solute travels prior to removal from the water column. Ammonium (NH4+) uptake length increased proportionally with stream size measured as specific discharge (discharge/stream width) with a scaling exponent = 1.01. In contrast, uptake lengths for nitrate (NO3-) and soluble reactive phosphorus (SRP) increased more rapidly than increases in specific discharge (scaling exponents = 1.19 for NO3- and 1.35 for SRP). Additionally, the ratio of inorganic nitrogen (N) uptake length to SRP uptake length declined with stream size; there was relatively lower demand for SRP compared to N as stream size increased. Finally, we related the scaling of uptake length with specific discharge to that of stream length using Hack's law and downstream hydraulic geometry. Ammonium uptake length increased less than proportionally with distance from the headwaters, suggesting a strong role for larger streams and rivers in regulating nutrient transport.

  20. Uptake of inorganic mercury by human locus ceruleus and corticomotor neurons: implications for amyotrophic lateral sclerosis

    PubMed Central

    2013-01-01

    Background Environmental toxins are suspected to play a role in the pathogenesis of amyotrophic lateral sclerosis (ALS). In an attempt to determine which pathways these toxins can use to enter motor neurons we compared the distribution of mercury in the CNS of a human and of mice that had been exposed to inorganic mercury. Results In the human who had been exposed to metallic mercury, mercury was seen predominantly in the locus ceruleus and corticomotor neurons, as well as in scattered glial cells. In mice that had been exposed to mercury vapor or mercuric chloride, mercury was present in lower motor neurons in the spinal cord and brain stem. Conclusions In humans, inorganic mercury can be taken up predominantly by corticomotor neurons, possibly when the locus ceruleus is upregulated by stress. This toxin uptake into corticomotor neurons is in accord with the hypothesis that ALS originates in these upper motor neurons. In mice, inorganic mercury is taken up predominantly by lower motor neurons. The routes toxins use to enter motor neurons depends on the nature of the toxin, the duration of exposure, and possibly the amount of stress (for upper motor neuron uptake) and exercise (for lower motor neuron uptake) at the time of toxin exposure. PMID:24252585

  1. Carbon-13 variations in the dissolved inorganic carbon in estuarine waters

    NASA Astrophysics Data System (ADS)

    Sackett, William M.; Netratanawong, Toedsit; Holmes, M. Elizabeth

    The stable carbon isotope composition of dissolved inorganic carbon [DIC] was measured in Tampa Bay and Florida Bay. The dependence of isotopic composition was evaluated in terms of atmospheric CO2 exchange, carbon exchange between fresh water and seawater (i.e. salinity) and DIC derived from the reaction between calcium carbonate and organically derived CO2.The extent of organic carbon oxidation and the magnitude of organic carbon loading [pollution] in an estuary have implications for variations in the δ13C of DIC and its use as an indicator of the relative amounts of land and marine derived organic and inorganic carbon in paleogeographic studies.

  2. The exchange of inorganic carbon on the Canadian Beaufort Shelf

    NASA Astrophysics Data System (ADS)

    Mol, Jacoba; Thomas, Helmuth; Hu, Xianmin; Myers, Paul G.

    2017-04-01

    The Mackenzie Shelf in the southeastern Beaufort Sea is an area that has experienced large changes in the past several decades as warming, sea-ice loss, and increased river discharge have altered carbon cycling. Upwelling and downwelling events are common on the shelf, caused by strong, fluctuating along-shore winds and resulting cross-shelf Ekman transport. Downwelling carries inorganic carbon and other remineralization products off the shelf and into the deep basin for possible long-term storage in the world oceans. Upwelling carries water high in dissolved inorganic carbon (DIC) and nutrients from the Pacific-origin upper halocline layer (UHL) onto the shelf. Profiles of DIC and total alkalinity (TA) taken in August and September of 2014 are used to investigate the cycling of inorganic carbon on the Mackenzie Shelf. The along-shore and cross-shelf transport of inorganic carbon is quantified using velocity field output from a simulation of the Arctic and Northern Hemisphere Atlantic (ANHA4) configuration of the Nucleus of European Modelling of the Ocean (NEMO) model. A strong upwelling event prior to sampling on the Mackenzie Shelf is analyzed and the resulting influence on the carbonate system, including the saturation state of aragonite and pH levels, is investigated. TA and δ18O are used to examine water mass distributions in the study area and analyze the influence of Pacific Water, Mackenzie River freshwater, and sea-ice melt on carbon dynamics and air-sea fluxes of CO2 in the surface mixed layer. Understanding carbon transfer in this seasonally dynamic environment is key in order to quantify the importance of Arctic shelf regions to the global carbon cycle and to provide a basis for understanding how its role will respond to the aforementioned changes in the regional marine system.

  3. Enrichment of Inorganic Martian Dust Simulant with Carbon Component can Provoke Neurotoxicity

    NASA Astrophysics Data System (ADS)

    Pozdnyakova, Natalia; Pastukhov, Artem; Dudarenko, Marina; Borysov, Arsenii; Krisanova, Natalia; Nazarova, Anastasia; Borisova, Tatiana

    2017-02-01

    Carbon is the most abundant dust-forming element in the interstellar medium. Tremendous amount of meteorites containing plentiful carbon and carbon-enriched dust particles have reached the Earth daily. National Institute of Health panel accumulates evidences that nano-sized air pollution components may have a significant impact on the central nervous system (CNS) in health and disease. During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the CNS. Based on above facts, here we present the study, the aims of which were: 1) to upgrade inorganic Martian dust simulant derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, nanodiamonds and carbon dots; 2) to analyse acute effects of upgraded simulant on key characteristics of synaptic neurotransmission; and 3) to compare above effects with those of inorganic dust and carbon components per se. Acute administration of carbon-containing Martian dust analogues resulted in a significant decrease in transporter-mediated uptake of L-[14C]glutamate (the major excitatory neurotransmitter) and [3H]GABA (the main inhibitory neurotransmitter) by isolated rat brain nerve terminals. The extracellular level of both neurotransmitters increased in the presence of carbon-containing Martian dust analogues. These effects were associated with action of carbon components of upgraded Martian dust simulant, but not with its inorganic constituent. This fact indicates that carbon component of native Martian dust can have deleterious effects on extracellular glutamate and GABA homeostasis in the CNS, and so glutamate- and GABA-ergic neurotransmission disballansing exitation and inhibition.

  4. Enrichment of Inorganic Martian Dust Simulant with Carbon Component can Provoke Neurotoxicity

    NASA Astrophysics Data System (ADS)

    Pozdnyakova, Natalia; Pastukhov, Artem; Dudarenko, Marina; Borysov, Arsenii; Krisanova, Natalia; Nazarova, Anastasia; Borisova, Tatiana

    2017-01-01

    Carbon is the most abundant dust-forming element in the interstellar medium. Tremendous amount of meteorites containing plentiful carbon and carbon-enriched dust particles have reached the Earth daily. National Institute of Health panel accumulates evidences that nano-sized air pollution components may have a significant impact on the central nervous system (CNS) in health and disease. During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the CNS. Based on above facts, here we present the study, the aims of which were: 1) to upgrade inorganic Martian dust simulant derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, nanodiamonds and carbon dots; 2) to analyse acute effects of upgraded simulant on key characteristics of synaptic neurotransmission; and 3) to compare above effects with those of inorganic dust and carbon components per se. Acute administration of carbon-containing Martian dust analogues resulted in a significant decrease in transporter-mediated uptake of L-[14C]glutamate (the major excitatory neurotransmitter) and [3H]GABA (the main inhibitory neurotransmitter) by isolated rat brain nerve terminals. The extracellular level of both neurotransmitters increased in the presence of carbon-containing Martian dust analogues. These effects were associated with action of carbon components of upgraded Martian dust simulant, but not with its inorganic constituent. This fact indicates that carbon component of native Martian dust can have deleterious effects on extracellular glutamate and GABA homeostasis in the CNS, and so glutamate- and GABA-ergic neurotransmission disballansing exitation and inhibition.

  5. Comparison of inorganic nitrogen uptake dynamics following snowmelt and at peak biomass in subalpine grasslands

    NASA Astrophysics Data System (ADS)

    Legay, N.; Grassein, F.; Robson, T. M.; Personeni, E.; Bataillé, M.-P.; Lavorel, S.; Clément, J.-C.

    2013-05-01

    Subalpine grasslands are highly seasonal environments and likely subject to strong variability in nitrogen (N) dynamics. Plants and microbes typically compete for N acquisition during the growing season and particularly at plant peak biomass. During snowmelt, plants could potentially benefit from a decrease in competition by microbes because of greater plant N uptake associated with active growth and freeze-thaw cycles restricting microbial growth. In managed subalpine grasslands, we expect these interactions to be influenced by recent changes in agricultural land-use, and associated modifications in plant and microbial communities. At a subalpine grassland site in the Central French Alps, a pulse of 15N was added to the soil at the end of snowmelt, allowing us to compare the dynamics of inorganic N uptake in plants and microbes during this period with that previously reported at the peak biomass in July. In all grasslands, specific plant (per g of biomass) dissolved inorganic N (DIN) uptake was two to five times greater at snow-melt than at peak biomass, whereas the specific microbial DIN uptakes were similar between the two sampling dates. On an area basis, plant communities took more DIN than microbial communities at the end of snowmelt, and the intensity of this DIN uptake by plants differed across land use types. Consequently, N partitioning after snowmelt switches in favor of plant communities allowing them to support their growing capacities at this period of the year. Seasonal differences in microbial and plant N-related dynamics were also affected by past (terraced vs. unterraced) rather than current (mown vs. unmown) land use. In terraced grasslands, microbial biomass N remained similar across seasons, whereas in unterraced grasslands, microbial biomass N was higher and microbial C : N lower at the end of snowmelt as compared to peak biomass. Further investigations on microbial community composition and their organic N uptake dynamics are required to

  6. Carbon uptake by karsts in the Houzhai Basin, southwest China

    NASA Astrophysics Data System (ADS)

    Yan, Junhua; Wang, Y. P.; Zhou, Guoyi; Li, Shenggong; Yu, Guirui; Li, Kun

    2011-12-01

    Using an estimated bicarbonate concentration ([HCO3-]) in water and discharge rates of surface water and underground water from the Houzhai Basin, southwest China, from 1986 to 2007, we estimate that the mean carbon uptake rate was 20.7 g C m-2 yr-1. The surface water and underground water contribute about equally to the total carbon uptake from 1986 to 2007. About 97% of the interannual variation of annual carbon uptake can be explained by the discharge rate. Within a year, the net carbon uptake rate by karst during the wet season (May-October) was found to be about 2.4 times that during the dry season (November-April). If the seasonal variations of discharge rate and bicarbonate concentrations are not accounted for, estimates of annual net carbon uptake by karst can be biased by >25%, but that bias becomes very small (<5%) when averaged from 1986 to 2007 for the Houzhai Basin. We also found that one of the empirical models as used in global modeling overestimated the net carbon uptake by karst at Houzhai Basin by 29%. Carbon uptake from chemical weathering of all karsts in China is estimated to be about 12 Tg C yr-1 at present (1 Tg = 1012 g), or about 57% of the rate of net carbon accumulated in the forest biomass from 1981 to 1998 in China; we therefore recommend the inclusion of carbon uptake from chemical weathering in the regional carbon budget of China.

  7. Contribution of fish to the marine inorganic carbon cycle.

    PubMed

    Wilson, R W; Millero, F J; Taylor, J R; Walsh, P J; Christensen, V; Jennings, S; Grosell, M

    2009-01-16

    Oceanic production of calcium carbonate is conventionally attributed to marine plankton (coccolithophores and foraminifera). Here we report that marine fish produce precipitated carbonates within their intestines and excrete these at high rates. When combined with estimates of global fish biomass, this suggests that marine fish contribute 3 to 15% of total oceanic carbonate production. Fish carbonates have a higher magnesium content and solubility than traditional sources, yielding faster dissolution with depth. This may explain up to a quarter of the increase in titratable alkalinity within 1000 meters of the ocean surface, a controversial phenomenon that has puzzled oceanographers for decades. We also predict that fish carbonate production may rise in response to future environmental changes in carbon dioxide, and thus become an increasingly important component of the inorganic carbon cycle.

  8. Inorganic carbon availability in benthic diatom communities: photosynthesis and migration.

    PubMed

    Marques da Silva, Jorge; Cruz, Sónia; Cartaxana, Paulo

    2017-09-05

    Diatom-dominated microphytobenthos (MPB) is the main primary producer of many intertidal and shallow subtidal environments, being therefore of critical importance to estuarine and coastal food webs. Owing to tidal cycles, intertidal MPB diatoms are subjected to environmental conditions far more variable than the ones experienced by pelagic diatoms (e.g. light, temperature, salinity, desiccation and nutrient availability). Nevertheless, benthic diatoms evolved adaptation mechanisms to these harsh conditions, including the capacity to move within steep physical and chemical gradients, allowing them to perform photosynthesis efficiently. In this contribution, we will review present knowledge on the effects of dissolved inorganic carbon (DIC) availability on photosynthesis and productivity of diatom-dominated MPB. We present evidence of carbon limitation of photosynthesis in benthic diatom mats and highly productive MPB natural communities. Furthermore, we hypothesize that active vertical migration of epipelic motile diatoms could overcome local depletion of DIC in the photic layer, providing the cells alternately with light and inorganic carbon supply. The few available longer-term experiments on the effects of inorganic carbon enrichment on the productivity of diatom-dominated MPB have yielded inconsistent results. Therefore, further studies are needed to properly assess the response of MPB communities to increased CO2 and ocean acidification related to climate change.This article is part of the themed issue 'The peculiar carbon metabolism in diatoms'. © 2017 The Author(s).

  9. Evolutionarily distinct strategies for the acquisition of inorganic carbon from seawater in marine diatoms.

    PubMed

    Tsuji, Yoshinori; Mahardika, Anggara; Matsuda, Yusuke

    2017-06-01

    The acquisition of dissolved inorganic carbon (DIC) in CO2-limited seawater is a central issue to understand in marine primary production. We previously demonstrated the occurrence of direct HCO3- uptake by solute carrier (SLC) 4 transporters in a diatom, a major marine primary producer. Homologs of SLC are found in both centric and pennate marine diatoms, suggesting that SLC transporters are generally conserved. Here, the generality of SLC-mediated DIC uptake in diatoms was examined using an SLC inhibitor, diisothiocyano-2,2'-stilbenedisulfonic acid (DIDS), and an inhibitor of external carbonic anhydrase, acetazolamide. DIDS suppressed high-DIC-affinity photosynthesis in the pennate diatom Phaeodactylum tricornutum and the centric diatom Chaetoceros muelleri, but there was no effect on either the pennate Cylindrotheca fusiformis or the centric Thalassiosira pseudonana. Interestingly, the DIC affinity of DIDS-insensitive strains was sensitive to treatment with up to 100 μM acetazolamide, displaying a 2-4-fold increase in K0.5[DIC]. In contrast, acetazolamide did not affect the DIDS-sensitive group. These results indicate the occurrence of two distinct strategies for DIC uptake-one primarily facilitated by SLC and the other being passive CO2 entry facilitated by external carbonic anhydrase. The phylogenetic independence of these strategies suggests that environmental demands drove the evolution of distinct DIC uptake mechanisms in diatoms. © The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  10. Uptake and withdrawal of droplets from carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Schebarchov, D.; Hendy, S. C.

    2011-01-01

    We give an account of recent studies of droplet uptake and withdrawal from carbon nanotubes using simple theoretical arguments and molecular dynamics simulations. Firstly, the thermodynamics of droplet uptake and release is considered and tested via simulation. We show that the Laplace pressure acting on a droplet assists capillary uptake, allowing sufficiently small non-wetting droplets to be absorbed. We then demonstrate how the uptake and release of droplets of non-wetting fluids can be exploited for the use of carbon nanotubes as nanopipettes. Finally, we extend the Lucas-Washburn model to deal with the dynamics of droplet capillary uptake, and again test this by comparison with molecular dynamics simulations.

  11. Organic and inorganic carbon production in the Gulf of Maine

    NASA Astrophysics Data System (ADS)

    Graziano, Lisa M.; Balch, William M.; Drapeau, David; Bowler, Bruce C.; Vaillancourt, Robert; Dunford, Suzanne

    2000-04-01

    Gulf of Maine carbon budgets have not included estimates of calcification rates and the flux of calcite to the sediments, processes which are thought to rival organic production in terms of carbon ultimately buried in the sediments. Measurements of inorganic (calcification) and organic (photosynthetic) carbon production were made in March, June, and November of 1996 throughout the Gulf of Maine and Georges Bank. Photosynthetic rates ranged from 1.3-182 mg C m -3 d -1, and calcification rates from 0-9.3 mg C m -3 d -1, for all depths and locations sampled. June calcite production integrated over the euphotic zone (based on 17 profiles of 6 depths) averaged 5% of total carbon production, or 26 mg C m -2 d -1. Calcite (inorganic C) production in June was >10% of total C production over deeper areas such as Wilkinson Basin, the Northeast Channel, and the shelf break. This ratio was lowest (1.3%) in tidally mixed, high-nutrient regions near Cape Sable and the Bay of Fundy, where diatoms were abundant and euphotic zone nitrate concentrations exceeded 2.2 μM. The turnover time of calcite particles in the water column, estimated from calcite production rates and suspended calcite concentrations, averaged 11.8 days in June and nearly 200 days in November, when calcite standing-stocks were high and calcification rates relatively low. Advective loss of calcite from the Gulf before settling is likely with long turnover times. Yearly carbon production for the Gulf of Maine was estimated at 182 g m -2 organic C and 3.7 g m -2 inorganic C, in the absence of an E. huxleyi bloom. If 1% of the organic carbon produced were buried in sediments, and 50% of the inorganic carbon, the result would be an approximately equal amount of each deposited in Gulf sediments. Inorganic carbon production by coccolithophores may therefore be an important contributor to Gulf and slope sediments, even during the non-bloom conditions studied here.

  12. The inorganic carbon distribution in Irish coastal waters

    NASA Astrophysics Data System (ADS)

    McGrath, Triona; Cave, Rachel; McGovern, Evin; Kivimae, Caroline

    2014-05-01

    Despite their relatively small surface area, coastal and shelf waters play a crucial role in the global climate through their influence on major biogeochemical cycles. Due to growing concern about ocean acidification as a result of increasing atmospheric CO2 concentrations, measurements of inorganic carbon parameters (dissolved inorganic carbon (DIC), total alkalinity (TA), pH and pCO2) have been made with increasing regularity over the past two decades. While it is clear that open ocean surface waters are acidifying at a fairly uniform rate ( -0.02 pH units per decade), less is known about changes in coastal waters due to the high complexity and spatial variability in these regions. Large spatial and temporal variability in coastal CO2 parameters is mainly due to nutrient inputs, biological activity, upwelling and riverine inputs of alkalinity and inorganic and organic carbon. The inorganic carbon system in Irish coastal waters is presented here, gathered from 9 surveys around the Irish coastline between 2009 and 2013. There are striking contrasts in the CO2 system between different areas, largely attributed to the bedrock composition of the nearby rivers. Freshwater end-member concentrations of TA, calculated from TA-salinity relationships in outer estuarine and nearshore coastal water, were supported by riverine TA data from the Irish Environmental Protection Agency. A large portion of Ireland is covered with limestone bedrock and as a result, many of the rivers have extremely high TA (>5000μmol/kg) due to the carbonate mineral content of the underlying bedrock. While such high TA has resulted in elevated pH and calcium carbonate saturation states in some coastal waters, (e.g. Galway Bay and Dublin Bay), the high TA in other areas was accompanied by particularly high DIC (e.g. River Shannon on the west coast), resulting in lower pH and aragonite/calcite saturation states and even CO2 degassing in the Shannon estuary. Due to non-limestone lithology in many parts

  13. Isotopic fractionation during the uptake and elimination of inorganic mercury by a marine fish.

    PubMed

    Xu, Xiaoyu; Wang, Wen-Xiong

    2015-11-01

    This study investigated the mass dependent (MDF) and independent fractionation (MIF) of stable mercury isotopes in fish during the uptake and elimination of inorganic species. Mercury accumulation during the exposure led to re-equilibration of organ isotopic compositions with the external sources, and elimination terminated the equilibrating with isotope ratios moving back to the original values. Generally, the isotopic behaviors corresponded to the changes of Hg accumulation in the muscle and liver, causing by the internal transportation, organ redistribution, and mixing of different sources. A small degree of MDF caused by biotransformation of Hg in the liver was documented during the elimination, whereas MIF was not observed. The absence of MIF during geochemical and metabolic processes suggested that mercury isotopes can be used as source tracers. Additionally, fish liver is a more responsive organ than muscle to track Hg source when it is mainly composed of inorganic species.

  14. Organic and inorganic nitrogen uptake by 21 dominant tree species in temperate and tropical forests.

    PubMed

    Liu, Min; Li, Changcheng; Xu, Xingliang; Wanek, Wolfgang; Jiang, Ning; Wang, Huimin; Yang, Xiaodong

    2017-05-08

    Evidence shows that many tree species can take up organic nitrogen (N) in the form of free amino acids from soils, but few studies have been conducted to compare organic and inorganic N uptake patterns in temperate and tropical tree species in relation to mycorrhizal status and successional state. We labeled intact tree roots by brief 15N exposures using field hydroponic experiments in a temperate forest and a tropical forest in China. A total of 21 dominant tree species were investigated, 8 in the temperate forest and 13 in the tropical forest. All investigated tree species showed highest uptake rates for NH4+ (ammonium), followed by glycine and NO3- (nitrate). Uptake of NH4+ by temperate trees averaged 12.8 μg N g-1 dry weight (d.w.) root h-1, while those by tropical trees averaged 6.8 μg N g-1 d.w. root h-1. Glycine uptake rates averaged 3.1 μg N g-1 d.w. root h-1 for temperate trees and 2.4 μg N g-1 d.w. root h-1 for tropical trees. NO3- uptake was the lowest (averaging 0.8 μg N g-1 d.w. root h-1 for temperate trees and 1.2 μg N g-1 d.w. root h-1 for tropical trees). Uptake of NH4+ accounted for 76% of the total uptake of all three N forms in the temperate forest and 64% in the tropical forest. Temperate tree species had similar glycine uptake rates as tropical trees, with the contribution being slightly lower (20% in the temperate forest and 23% in the tropical forest). All tree species investigated in the temperate forest were ectomycorrhizal and all species but one in the tropical forest were arbuscular mycorrhizal (AM). Ectomycorrhizal trees showed significantly higher NH4+ and lower NO3- uptake rates than AM trees. Mycorrhizal colonization rates significantly affected uptake rates and contributions of NO3- or NH4+, but depended on forest types. We conclude that tree species in both temperate and tropical forests preferred to take up NH4+, with organic N as the second most important N source. These findings suggest that temperate and tropical forests

  15. Soil Inorganic Carbon in Deserts: Active Carbon Sink or Inert Reservoir?

    NASA Astrophysics Data System (ADS)

    Monger, H. C.; Cole, D. R.

    2011-12-01

    Soil inorganic carbon is the third largest C pool in the active global carbon cycle, containing at least 800 petagrams of carbon. Although carbonate dissolution-precipitation reactions have been understood for over a century, the role of soil inorganic carbon in carbon sequestration, and in particular pedogenic carbonate, is a deceptively complex process because it involves interdependent connections among climate, plants, microorganisms, silicate minerals, soil moisture, pH, and Ca supply via rain, dust, or in situ weathering. An understanding of soil inorganic carbon as a sink or reservoir also requires examination of the system at local to continental scales and at seasonal to millennial time scales. In desert soils studied in North America, carbon isotope ratios and radiocarbon dates were measured in combination with electron microscopy, lab and field experiments with biological calcite formation, and field measurements of carbon dioxide emissions. These investigations reveal that soil inorganic carbon is both an active sink and a inert reservoir depending on the spatial and temporal scale and source of calcium.

  16. Sorptive uptake of selenium with magnetite and its supported materials onto activated carbon.

    PubMed

    Kwon, Jae H; Wilson, Lee D; Sammynaiken, R

    2015-11-01

    Kinetic and equilibrium uptake studies of selenite in aqueous solution with synthetic magnetite (Mag-P), commercial magnetite (Mag-C), goethite, activated carbon (AC), and a composite material containing 19% magnetite supported on activated carbon (CM-19) were investigated. Kinetic uptake studies used a one-pot setup at pH 5.26 at variable temperature. Sampling of unbound selenite in-situ was achieved with analytical detection by atomic absorbance. The sorptive uptake at equilibrium and kinetic conditions are listed in descending order: goethite>Mag-P>Mag-C>CM-19. Kinetic uptake parameters reveal that Mag-P showed apparent negative values for the activation energy (E(a)) and the enthalpy of activation (ΔH(‡)), in agreement with a multi-step process for the kinetic uptake of selenite. By contrast, Mag-C, CM-19, and goethite showed positive values for E(a) and ΔH(‡). The uptake properties of the various sorbent materials with selenite are in accordance with the formation of inner- and out-sphere complexes. Leaching of iron from the composite material (CM-19) was attenuated due to the stabilizing effect of the magnetite within the pore sites and the surface of AC. Supported iron oxide nanomaterial composites represent a unique sorbent material with tunable uptake properties toward inorganic selenite in aqueous solution.

  17. Effect of Carbonic Anhydrase Inhibitors on Inorganic Carbon Accumulation by Chlamydomonas reinhardtii1

    PubMed Central

    Moroney, James V.; Husic, H. David; Tolbert, N. E.

    1985-01-01

    Membrane-permeable and impermeable inhibitors of carbonic anhydrase have been used to assess the roles of extracellular and intracellular carbonic anhydrase on the inorganic carbon concentrating system in Chlamydomonas reinhardtii. Acetazolamide, ethoxzolamide, and a membrane-impermeable, dextran-bound sulfonamide were potent inhibitors of extracellular carbonic anhydrase measured with intact cells. At pH 5.1, where CO2 is the predominant species of inorganic carbon, both acetazolamide and the dextran-bound sulfonamide had no effect on the concentration of CO2 required for the half-maximal rate of photosynthetic O2 evolution (K0.5[CO2]) or inorganic carbon accumulation. However, a more permeable inhibitor, ethoxzolamide, inhibited CO2 fixation but increased the accumulation of inorganic carbon as compared with untreated cells. At pH 8, the K0.5(CO2) was increased from 0.6 micromolar to about 2 to 3 micromolar with both acetazolamide and the dextran-bound sulfonamide, but to a higher value of 60 micromolar with ethoxzolamide. These results are consistent with the hypothesis that CO2 is the species of inorganic carbon which crosses the plasmalemma and that extracellular carbonic anhydrase is required to replenish CO2 from HCO3− at high pH. These data also implicate a role for intracellular carbonic anhydrase in the inorganic carbon accumulating system, and indicate that both acetazolamide and the dextran-bound sulfonamide inhibit only the extracellular enzyme. It is suggested that HCO3− transport for internal accumulation might occur at the level of the chloroplast envelope. PMID:16664365

  18. Water uptake of multicomponent organic mixtures and their influence on hygroscopicity of inorganic salts.

    PubMed

    Wang, Yuanyuan; Jing, Bo; Guo, Yucong; Li, Junling; Tong, Shengrui; Zhang, Yunhong; Ge, Maofa

    2016-07-01

    The hygroscopic behaviors of atmospherically relevant multicomponent water soluble organic compounds (WSOCs) and their effects on ammonium sulfate (AS) and sodium chloride were investigated using a hygroscopicity tandem differential mobility analyzer (HTDMA) in the relative humidity (RH) range of 5%-90%. The measured hygroscopic growth was compared with predictions from the Extended-Aerosol Inorganics Model (E-AIM) and Zdanovskii-Stokes-Robinson (ZSR) method. The equal mass multicomponent WSOCs mixture containing levoglucosan, succinic acid, phthalic acid and humic acid showed gradual water uptake without obvious phase change over the whole RH range. It was found that the organic content played an important role in the water uptake of mixed particles. When organic content was dominant in the mixture (75%), the measured hygroscopic growth was higher than predictions from the E-AIM or ZSR relation, especially under high RH conditions. For mass fractions of organics not larger than 50%, the hygroscopic growth of mixtures was in good agreement with model predictions. The influence of interactions between inorganic and organic components on the hygroscopicity of mixed particles was related to the salt type and organic content. These results could contribute to understanding of the hygroscopic behaviors of multicomponent aerosol particles. Copyright © 2016. Published by Elsevier B.V.

  19. Bony fish and their contribution to marine inorganic carbon cycling

    NASA Astrophysics Data System (ADS)

    Salter, Michael; Perry, Chris; Wilson, Rod; Harborne, Alistair

    2016-04-01

    Conventional understanding of the marine inorganic carbon cycle holds that CaCO3 (mostly as low Mg-calcite and aragonite) precipitates in the upper reaches of the ocean and sinks to a point where it either dissolves or is deposited as sediment. Thus, it plays a key role controlling the distribution of DIC in the oceans and in regulating their capacity to absorb atmospheric CO2. However, several aspects of this cycle remain poorly understood and have long perplexed oceanographers, such as the positive alkalinity anomaly observed in the upper water column of many of the world's oceans, above the aragonite and calcite saturation horizons. This anomaly would be explained by extensive dissolution of a carbonate phase more soluble than low Mg-calcite or aragonite, but major sources for such phases remain elusive. Here we highlight marine bony fish as a potentially important primary source of this 'missing' high-solubility CaCO3. Precipitation of CaCO3 takes place within the intestines of all marine bony fish as part of their normal physiological functioning, and global production models suggest it could account for up to 45 % of total new marine CaCO3 production. Moreover, high Mg-calcite containing >25 % mol% MgCO3 - a more soluble phase than aragonite - is a major component of these precipitates. Thus, fish CaCO3 may at least partially explain the alkalinity anomaly in the upper water column. However, the issue is complicated by the fact that carbonate mineralogy actually varies among fish species, with high Mg-calcite (HMC), low Mg-calcite (LMC), aragonite, and amorphous calcium carbonate (ACC) all being common products. Using data from 22 Caribbean fish species, we have generated a novel production model that resolves phase proportions. We evaluate the preservation/dissolution potential of these phases and consider potential implications for marine inorganic carbon cycling. In addition, we consider the dramatic changes in fish biomass structure that have resulted

  20. Uptake dynamics of inorganic mercury and methylmercury by the earthworm Pheretima guillemi.

    PubMed

    Dang, Fei; Zhao, Jie; Zhou, Dongmei

    2016-02-01

    Mercury uptake dynamics in the earthworm Pheretima guillemi, including the dissolved uptake rate constant (ku) from pore-water and assimilation efficiencies (AEs) from mercury-contaminated soil, was quantified in this study. Dissolved uptake rate constants were 0.087 and 0.553 L g(-1) d(-1) for inorganic mercury (IHg) and methylmercury (MeHg), respectively. Assimilation efficiency of IHg in field-contaminated soil was 7.2%, lower than 15.4% of spiked soil. In contrast, MeHg exhibited comparable AEs for both field-contaminated and spiked soil (82.4-87.2%). Within the framework of biodynamic model, we further modelled the exposure pathways (dissolved exposure vs soil ingestion) to source the accumulated mercury in Pheretima guillemi. The model showed that the relative importance of soil ingestion to mercury bioaccumulation depended largely on mercury partitioning coefficients (K(d)), and was also influenced by soil ingestion rate of earthworms. In the examined field-contaminated soil, almost (>99%) accumulated IHg and MeHg was predicted to derive from soil ingestion. Therefore, soil ingestion should be carefully considered when assessing mercury exposure risk to earthworms.

  1. Evidence for an Inorganic Carbon-Concentrating Mechanism in the Symbiotic Dinoflagellate Symbiodinium sp.1

    PubMed Central

    Leggat, William; Badger, Murray R.; Yellowlees, David

    1999-01-01

    The presence of a carbon-concentrating mechanism in the symbiotic dinoflagellate Symbiodinium sp. was investigated. Its existence was postulated to explain how these algae fix inorganic carbon (Ci) efficiently despite the presence of a form II Rubisco. When the dinoflagellates were isolated from their host, the giant clam (Tridacna gigas), CO2 uptake was found to support the majority of net photosynthesis (45%–80%) at pH 8.0; however, 2 d after isolation this decreased to 5% to 65%, with HCO3− uptake supporting 35% to 95% of net photosynthesis. Measurements of intracellular Ci concentrations showed that levels inside the cell were between two and seven times what would be expected from passive diffusion of Ci into the cell. Symbiodinium also exhibits a distinct light-activated intracellular carbonic anhydrase activity. This, coupled with elevated intracellular Ci and the ability to utilize both CO2 and HCO3− from the medium, suggests that Symbiodinium sp. does possess a carbon-concentrating mechanism. However, intracellular Ci levels are not as large as might be expected of an alga utilizing a form II Rubisco with a poor affinity for CO2. PMID:10594111

  2. Factors influencing anthropogenic carbon dioxide uptake in the North Atlantic in models of the ocean carbon cycle

    SciTech Connect

    Smith, R.S.; Marotzke, J.

    2008-09-30

    The uptake and storage of anthropogenic carbon in the North Atlantic is investigated using different configurations of ocean general circulation/carbon cycle models. We investigate how different representations of the ocean physics in the models, which represent the range of models currently in use, affect the evolution of CO{sub 2} uptake in the North Atlantic. The buffer effect of the ocean carbon system would be expected to reduce ocean CO{sub 2} uptake as the ocean absorbs increasing amounts of CO{sub 2}. We find that the strength of the buffer effect is very dependent on the model ocean state, as it affects both the magnitude and timing of the changes in uptake. The timescale over which uptake of CO{sub 2} in the North Atlantic drops to below preindustrial levels is particularly sensitive to the ocean state which sets the degree of buffering; it is less sensitive to the choice of atmospheric CO{sub 2} forcing scenario. Neglecting physical climate change effects, North Atlantic CO{sub 2} uptake drops below preindustrial levels between 50 and 300 years after stabilisation of atmospheric CO{sub 2} in different model configurations. Storage of anthropogenic carbon in the North Atlantic varies much less among the different model configurations, as differences in ocean transport of dissolved inorganic carbon and uptake of CO{sub 2} compensate each other. This supports the idea that measured inventories of anthropogenic carbon in the real ocean cannot be used to constrain the surface uptake. Including physical climate change effects reduces anthropogenic CO{sub 2} uptake and storage in the North Atlantic further, due to the combined effects of surface warming, increased freshwater input, and a slowdown of the meridional overturning circulation. The timescale over which North Atlantic CO{sub 2} uptake drops to below preindustrial levels is reduced by about one-third, leading to an estimate of this timescale for the real world of about 50 years after the stabilisation

  3. Epitaxial relationships between calcium carbonate and inorganic substrates.

    PubMed

    Yang, Taewook; Jho, Jae Young; Kim, Il Won

    2014-09-15

    The polymorph-selective crystallization of calcium carbonate has been studied in terms of epitaxial relationship between the inorganic substrates and the aragonite/calcite polymorphs with implication in bioinspired mineralization. EpiCalc software was employed to assess the previously published experimental results on two different groups of inorganic substrates: aragonitic carbonate crystals (SrCO3, PbCO3, and BaCO3) and a hexagonal crystal family (α-Al2O3, α-SiO2, and LiNbO3). The maximum size of the overlayer (aragonite or calcite) was calculated for each substrate based on a threshold value of the dimensionless potential to estimate the relative nucleation preference of the polymorphs of calcium carbonate. The results were in good agreement with previous experimental observations, although stereochemical effects between the overlayer and substrate should be separately considered when existed. In assessing the polymorph-selective nucleation, the current method appeared to provide a better tool than the oversimplified mismatch parameters without invoking time-consuming molecular simulation.

  4. Inorganic carbon parameters responding to summer hypoxia outside the Changjiang Estuary and the related implications

    NASA Astrophysics Data System (ADS)

    Wang, Bin; Chen, Jianfang; Jin, Haiyan; Li, Hongliang; Xu, Jie

    2013-12-01

    The eutrophication, hypoxia and coastal acidification are attracting more and more attention. In this study, inorganic carbon parameters, including dissolved inorganic carbon (DIC), total alkalinity (TA) and calculated partial pressure of CO2 ( pCO2), obtained from a summer cruise in August, 2009, were used to investigate their integrated response to biological processes accompanying the oxygen depletion in the areas off the Changjiang Estuary. According to the observations, the typical hypoxia occurred in the bottom water just outside the Changjiang Estuary with Dissolved Oxygen (DO) lower than 2.00 mg L-1. The biological uptake in the surface water and the decomposition of organic matter in the bottom water were fully coupled with each other. The high concentration of Chl_ a (Chl_ a = 10.9 μg L-1) and DO (9.25 mg L-1), profoundly decreased DIC concentration (1828 μmol kg-1) and elevated pH (8.42) was observed in the surface water. The correspondingly increased DIC and depletion of oxygen were observed in the bottom water. The semi-quantitative analysis proved that the locally-produced phytoplankton, determined by primary productivity, was deposited to the bottom and contributed about 76% of total amount of the organic carbon decomposition in the bottom. However, in the bottom hypoxia (DO = 2.05 mg L-1) area observed in the Southern Zhejiang coastal water, the responding patterns of inorganic carbon parameters deviated from the previous one. The expanding of Changjiang Diluted Water (CDW), the adding of Hangzhou Bay water (with high DIC concentration) and Coastal Current together modify the DIC background value in this area, and the local degeneration and upwelling process may also help to offset the local DIC removed by net biological uptake in surface water. In addition, when the mixing occurring in autumn, which may break the summer stratification, the excess release of high DIC in the bottom water to the subsurface water could have an important influence on

  5. Facile manipulation of individual carbon nanotubes assisted by inorganic nanoparticles.

    PubMed

    Zhang, Rufan; Ning, Zhiyuan; Zhang, Yingying; Xie, Huanhuan; Zhang, Qiang; Qian, Weizhong; Chen, Qing; Wei, Fei

    2013-07-21

    Carbon nanotubes (CNTs) are promising building blocks for nanodevices owing to their superior electrical, thermal and mechanical properties. One of the key issues for their study and application is the efficient location, transfer and manipulation of individual CNTs. In this contribution, we show that the manipulation of individual suspended CNTs has been carried out on the macroscale under low magnification, using inorganic nanoparticles (NPs) as indicators. Individual ultralong CNTs can be stretched, cut, and transferred to other substrates for further characterization. Complicated CNT structures were fabricated under optical microscopes. The inorganic NPs also facilitate the manipulation and characterization of individual CNTs under a scanning electron microscope with low magnification. Additionally, the irregular NPs deposited on suspended CNTs can also make the outer shell of the suspended CNTs display torsion or rotation around the inner shells when placed in a flow of gas, making the fabrication of CNT-NP-hybrid-based nanodevices feasible. Our results demonstrate the extraordinary capability of this manipulation technique for individual CNTs, enabled by decoration with inorganic NPs.

  6. Effects of inorganic and organic amendments on the uptake of lead and trace elements by Brassica chinensis grown in an acidic red soil.

    PubMed

    Tang, Xianjin; Li, Xia; Liu, Xingmei; Hashmi, Muhammad Z; Xu, Jianming; Brookes, Philip C

    2015-01-01

    A greenhouse study was conducted to investigate the effects of inorganic (phosphate rock, single superphosphate and calcium magnesium phosphate) and organic amendments (peat, straw manure and pig manure) on the uptake of lead (Pb) and trace elements by Chinese Cabbage (Brassica chinensis) grown in an acidic red soil. The application of all organic amendments increased the soil pH while inorganic amendments such as single superphosphate did not. Both inorganic and organic amendments decreased the availability and uptake of Pb while the organic amendments were superior to the inorganic (phosphate) amendments in reducing the availability of the more labile (soluble and exchangeable Pb) forms of soil Pb. More Pb was taken up by roots than shoots with all soil amendments. Among the organic amendments, straw manure and pig manure caused the largest decrease in Pb availability at 456.5 and 457.3 mg kg(-1), respectively, when a high level of 30 g organic amendments kg(-1) was applied. The organic amendments greatly increased the fraction D targeted to Fe-Mn oxides bound Pb, and decreased the fraction A (water-soluble), B (exchangeable), and C (carbonate-bound), thereby decreasing the solubility and mobility of Pb in soil. The organic amendments also significantly improved the concentrations of Fe, Mn, Cu and Zn in the soil and shoots (except Fe in shoots and/or roots), which are essential for plant nutrition. The organic amendments of straw and pig manure lowered the availability and uptake of Pb but not that of other trace metals. Thus, these amendments have the potential to remediate Pb-contaminated soils in situ. Copyright © 2014 Elsevier Ltd. All rights reserved.

  7. Inorganic carbon physiology underpins macroalgal responses to elevated CO2

    PubMed Central

    Cornwall, Christopher E.; Revill, Andrew T.; Hall-Spencer, Jason M.; Milazzo, Marco; Raven, John A.; Hurd, Catriona L.

    2017-01-01

    Beneficial effects of CO2 on photosynthetic organisms will be a key driver of ecosystem change under ocean acidification. Predicting the responses of macroalgal species to ocean acidification is complex, but we demonstrate that the response of assemblages to elevated CO2 are correlated with inorganic carbon physiology. We assessed abundance patterns and a proxy for CO2:HCO3− use (δ13C values) of macroalgae along a gradient of CO2 at a volcanic seep, and examined how shifts in species abundance at other Mediterranean seeps are related to macroalgal inorganic carbon physiology. Five macroalgal species capable of using both HCO3− and CO2 had greater CO2 use as concentrations increased. These species (and one unable to use HCO3−) increased in abundance with elevated CO2 whereas obligate calcifying species, and non-calcareous macroalgae whose CO2 use did not increase consistently with concentration, declined in abundance. Physiological groupings provide a mechanistic understanding that will aid us in determining which species will benefit from ocean acidification and why. PMID:28417970

  8. Manure and inorganic fertilizer effects on carbon balance and losses in irrigated corn

    USDA-ARS?s Scientific Manuscript database

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC an...

  9. Carbon balance in an irrigated corn field after inorganic fertilizer or manure application

    USDA-ARS?s Scientific Manuscript database

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC an...

  10. Ultraviolet-B radiation effects on inorganic nitrogen uptake by natural assemblages of oceanic plankton

    SciTech Connect

    Behrenfeld, M.J.; Lean, D.R.S.; Lee, H. II

    1995-02-01

    Ultraviolet-B radiation (UVBR: 290-320 nm) inhibited ammonium uptake ({rho}{sub NH4}) and nitrate uptake ({rho}{sub NO3}) in natural plankton assemblages collected during a transect from 37{degrees}N to 55{degrees}N in the Pacific Ocean. Comparison of responses in {rho}{sub NH4} to ambient solar- and lamp-enhanced UVBR spectra allowed calculation of an action spectrum for {rho}{sub NH4} inhibition. The slope of the action spectrum for {rho}{sub NH4} is half as steep as action spectra for UVBR inhibition of photosynthetic carbon uptake. Consequently, UVBR-induced photoinhibition of {rho}{sub NH4} extends to greater depths than inhibition of carbon fixation due to the greater relative effect of longer UVBR wavelengths. Inhibition of {rho}{sub NH4} was dependent upon UVBR dose when doses were weighted by the {rho}{sub NH4} action spectrum. Dependence of UVBR inhibition of {rho}{sub NH4} on dose rate was not apparent. We found that near-surface {rho}{sub NH4} and {rho}{sub NO3} can be overestimated in excess of 50% when measured using standard incubation vessels made of UVBR-absorbing materials such as polycarbonate. 68 refs., 9 figs., 1 tab.

  11. Identification and characterization of a solute carrier, CIA8, involved in inorganic carbon acclimation in Chlamydomonas reinhardtii.

    PubMed

    Machingura, Marylou C; Bajsa-Hirschel, Joanna; Laborde, Susan M; Schwartzenburg, Joshua B; Mukherjee, Bratati; Mukherjee, Ananya; Pollock, Steve V; Förster, Britta; Price, G Dean; Moroney, James V

    2017-06-13

    The supply of inorganic carbon (Ci) at the site of fixation by Rubisco is a key parameter for efficient CO2 fixation in aquatic organisms including the green alga, Chlamydomonas reinhardtii. Chlamydomonas reinhardtii cells, when grown on limiting CO2, have a CO2-concentrating mechanism (CCM) that functions to concentrate CO2 at the site of Rubisco. Proteins thought to be involved in inorganic carbon uptake have been identified and localized to the plasma membrane or chloroplast envelope. However, current CCM models suggest that additional molecular components are involved in Ci uptake. In this study, the gene Cia8 was identified in an insertional mutagenesis screen and characterized. The protein encoded by Cia8 belongs to the sodium bile acid symporter subfamily. Transcript levels for this gene were significantly up-regulated when the cells were grown on low CO2. The cia8 mutant exhibited reduced growth and reduced affinity for Ci when grown in limiting CO2 conditions. Prediction programs localize this protein to the chloroplast. Ci uptake and the photosynthetic rate, particularly at high external pH, were reduced in the mutant. The results are consistent with the model that CIA8 is involved in Ci uptake in C. reinhardtii. © The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  12. Soil Inorganic Carbon Formation: Can Parent Material Overcome Climate?

    NASA Astrophysics Data System (ADS)

    Stanbery, C.; Will, R. M.; Seyfried, M. S.; Benner, S. G.; Flores, A. N.; Guilinger, J.; Lohse, K. A.; Good, A.; Black, C.; Pierce, J. L.

    2014-12-01

    Soil carbon is the third largest carbon reservoir and is composed of both organic and inorganic constituents. However, the storage and flux of soil carbon within the global carbon cycle are not fully understood. While organic carbon is often the focus of research, the factors controlling the formation and dissolution of soil inorganic carbon (SIC) are complex. Climate is largely accepted as the primary control on SIC, but the effects of soil parent material are less clear. We hypothesize that effects of parent material are significant and that SIC accumulation will be greater in soils formed from basalts than granites due to the finer textured soils and more abundant calcium and magnesium cations. This research is being conducted in the Reynolds Creek Experimental Watershed (RCEW) in southwestern Idaho. The watershed is an ideal location because it has a range of gradients in precipitation (250 mm to 1200 mm), ecology (sagebrush steppe to juniper), and parent materials (a wide array of igneous and sedimentary rock types) over a relatively small area. Approximately 20 soil profiles will be excavated throughout the watershed and will capture the effects of differing precipitation amounts and parent material on soil characteristics. Several samples at each site will be collected for analysis of SIC content and grain size distribution using a pressure calcimeter and hydrometers, respectively. Initial field data suggests that soils formed over basalts have a higher concentration of SIC than those on granitic material. If precipitation is the only control on SIC, we would expect to see comparable amounts in soils formed on both rock types within the same precipitation zone. However, field observations suggest that for all but the driest sites, soils formed over granite had no SIC detected while basalt soils with comparable precipitation had measurable amounts of SIC. Grain size distribution appears to be a large control on SIC as the sandier, granitic soils promote

  13. Inorganic carbon acquisition in the acid-tolerant alga Chlorella kessleri.

    PubMed

    El-Ansari, Omar; Colman, Brian

    2015-01-01

    The ability of the freshwater alga, Chlorella kessleri, to maintain a carbon concentrating mechanism when grown at acid pH was investigated. The alga grows over the pH range 4.0-9.0 and was found to take up bicarbonate and CO2 actively when grown at pH 6.0. However, when grown at acid pH (below 5.5), it does not have active CO2 uptake. The acidotolerant species maintained an internal pH of 6.1-7.5 over the external pH range 4.5-7.5, thus the pH difference between the cell interior and the external medium was large enough to allow for the diffusive uptake of CO2 at acid external pH. Mass spectrometric monitoring of O2 and CO2 fluxes by suspensions of C. kessleri, grown at acid pH, and maintained at pH 7.5 showed that the rates of O2 evolution did not exceed those of CO2 uptake. The final CO2 compensation concentrations of 14.0-17.7 µM reached by photosynthetic cells were above the CO2 equilibrium concentration in the external medium, indicating a lack of active CO2 uptake at acid pH. Chlorella kessleri accumulated CO2 with internal concentrations that were 9.9, 18.7 and 22.7-fold that of the external medium for cells grown, respectively, at pH 4.5, 5.0 and 5.5. The ability of C. kessleri cells to accumulate high intracellular concentrations of inorganic carbon at acid pH would provide a sufficiently high concentration of CO2 at the active site of Rubisco thus allowing the alga to maintain growth rates similar to those at alkaline pH. © 2014 Scandinavian Plant Physiology Society.

  14. RAPID AND PRECISE METHOD FOR MEASURING STABLE CARBON ISOTOPE RATIOS OF DISSOLVED INORGANIC CARBON

    EPA Science Inventory

    We describe a method for rapid preparation, concentration and stable isotopic analysis of dissolved inorganic carbon (d13C-DIC). Liberation of CO2 was accomplished by placing 100 ?l phosphoric acid and 0.9 ml water in an evacuated 1.7-ml gas chromatography (GC) injection vial. Fo...

  15. RAPID AND PRECISE METHOD FOR MEASURING STABLE CARBON ISOTOPE RATIOS OF DISSOLVED INORGANIC CARBON

    EPA Science Inventory

    We describe a method for rapid preparation, concentration and stable isotopic analysis of dissolved inorganic carbon (d13C-DIC). Liberation of CO2 was accomplished by placing 100 ?l phosphoric acid and 0.9 ml water in an evacuated 1.7-ml gas chromatography (GC) injection vial. Fo...

  16. Absorption of inorganic halides produced from Freon 12 by calcium carbonate containing iron(III) oxide

    SciTech Connect

    Imamura, Seiichiro; Matsuba, Yoichi; Yamada, Etsu; Takai, Kenji; Utani, Kazunori

    1997-09-01

    Inorganic halides produced by the catalytic decomposition of Freon 12 were fixed by calcium carbonate, which is the main component of limestone. Iron(III) oxide, which is present as a contaminant in limestone, promoted the absorption of the halides by calcium carbonate at low temperatures. The supposed action of iron(III) oxide was to first react with inorganic halides, forming iron halides, and, then, transfer them to calcium carbonate to replace carbonate ion in a catalytic way. Thus, calcium carbonate containing iron oxides (limestone) can be used as an effective absorbent for the inorganic halogens produced during the decomposition of Freons.

  17. The effects of combined application of inorganic Martian dust simulant and carbon dots on glutamate transport rat brain nerve terminals

    NASA Astrophysics Data System (ADS)

    Borisova, Tatiana; Krisanova, Natalia; Nazarova, Anastasiya; Borysov, Arseniy; Pastukhov, Artem; Pozdnyakova, Natalia; Dudarenko, Marina

    2016-07-01

    During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the central nervous system (Oberdorster et al., 2004). Recently, the research team of this study found the minor fractions of nanoparticles with the size ~ 50 -60 nm in Lunar and Martian dust stimulants (JSC-1a and JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin), whereas the average size of the simulants was 1 mm and 4mm, respectively (Krisanova et al., 2013). Also, the research team of this study discovered new phenomenon - the neuromodulating and neurotoxic effect of carbon nano-sized particles - Carbon dots (C-dots), originated from ash of burned carbon-containing product (Borisova et al, 2015). The aims of this study was to analyse acute effects of upgraded stimulant of inorganic Martian dust derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, carbon dots, on the key characteristic of synaptic neurotransmission. Acute administration of carbon-containing Martian dust analogue resulted in a significant decrease in transporter-mediated uptake of L-[14C]glutamate (the major excitatory neurotransmitter) by isolated rat brain nerve terminals. The ambient level of the neurotransmitter in the preparation of nerve terminals increased in the presence of carbon dot-contained Martian dust analogue. These effects were associated with action of carbon component of the upgraded Martian dust stimulant but not with its inorganic constituent.

  18. Technique for measuring carbon monoxide uptake in mice

    SciTech Connect

    Depledge, M.H.; Collis, C.H.; Chir, B.; Barrett, A.

    1981-04-01

    A new method has been developed for measuring carbon monoxide (CO) uptake in mice. Each animal was placed in a syringe and allowed to rebreathe a mixture of CO and helium (He) for 60 s. CO uptake was detemined from a comparison of CO and He concentrations before and after rebreathing. Weight specific CO uptake increased with body weight in CBA mice weighing between 20 to 35 gr. In larger mice, size dependence was less marked, although a slight fall in CO uptake was observed in older animals. Anaesthesia reduced ventilatory rate and CO uptake to a variable extent. The method is reproducible, non-invasive and does not require anaesthesia; consequently, it can be used to study serial changes in lung function. It is sensitive enough to detect lung damage in CBA mice following 16 Gy total body irradiation. Values of diffusing capacity obtained for mice using this method are consistent with published values.

  19. Salicylhydroxamic acid (SHAM) inhibition of the dissolved inorganic carbon concentrating process in unicellular green algae

    SciTech Connect

    Goyal, A.; Tolbert, N.E. )

    1990-03-01

    Rates of photosynthetic O{sub 2} evolution, for measuring K{sub 0.5}(CO{sub 2} + HCO{sub 3}{sup {minus}}) at pH 7, upon addition of 50 micromolar HCO{sub 3}{sup {minus}} to air-adapted Chlamydomonas, Dunaliella, or Scenedesmus cells, were inhibited up to 90% by the addition of 1.5 to 4.0 millimolar salicylhydroxamic acid (SHAM) to the aqueous medium. The apparent K{sub i}(SHAM) for Chlamydomonas cells was about 2.5 millimolar, but due to low solubility in water effective concentrations would be lower. Salicylhydroxamic acid did not inhibit oxygen evolution or accumulation of bicarbonate by Scenedesmus cells between pH 8 to 11 or by isolated intact chloroplasts from Dunaliella. Thus, salicylhydroxamic acid appears to inhibit CO{sub 2} uptake, whereas previous results indicate that vanadate inhibits bicarbonate uptake. These conclusions were confirmed by three test procedures with three air-adapted algae at pH 7. Salicylhydroxamic acid inhibited the cellular accumulation of dissolved inorganic carbon, the rate of photosynthetic O{sub 2} evolution dependent on low levels of dissolved inorganic carbon (50 micromolar NaHCO{sub 3}), and the rate of {sup 14}CO{sub 2} fixation with 100 micromolar ({sup 14}C)HCO{sub 3}{sup {minus}}. Salicylhydroxamic acid inhibition of O{sub 2} evolution and {sup 14}CO{sub 2}-fixation was reversed by higher levels of NaHCO{sub 3}. Thus, salicylhydroxamic acid inhibition was apparently not affecting steps of photosynthesis other than CO{sub 2} accumulation. Although salicylhydroxamic acid is an inhibitor of alternative respiration in algae, it is not known whether the two processes are related.

  20. Uptake mechanism for iodine species to black carbon.

    PubMed

    Choung, Sungwook; Um, Wooyong; Kim, Minkyung; Kim, Min-Gyu

    2013-09-17

    Natural organic matter (NOM) plays an important role in determining the fate and transport of iodine species such as iodide (I(-)) and iodate (IO3(-)) in groundwater system. Although NOM exists as diverse forms in environments, prior iodine studies have mainly focused on uptake processes of iodide and iodate to humic materials. This study was conducted to determine the iodide and iodate uptake potential for a particulate NOM (i.e., black carbon [BC]). A laboratory-produced BC and commercial humic acid were used for batch experiments to compare their iodine uptake properties. The BC exhibited >100 times greater uptake capability for iodide than iodate at low pH of ~3, while iodide uptake was negligible for the humic acid. The uptake properties of both solids strongly depend on the initial iodine aqueous concentrations. After uptake reaction of iodide to the BC, X-ray absorption fine structure spectroscopy results indicated that the iodide was converted to electrophilic species, and iodine was covalently bound to carbon atom in polycyclic aromatic hydrocarbons present in the BC. The computed distribution coefficients (i.e., Kd values) suggest that the BC materials retard significantly the transport of iodide at low pH in environmental systems containing even a small amount of BC.

  1. Uptake Mechanism for Iodine Species to Black Carbon

    SciTech Connect

    Choung, Sungwook; Um, Wooyong; Kim, Min Kyung; Kim, Min-Gyu

    2013-08-13

    Natural organic matter (NOM) plays an important role in determining the fate and transport of iodine species such as iodide (I-) and iodate (IO3-) in groundwater system. Although NOM exists as diverse forms in environments, prior iodine studies have mainly focused on uptake processes of iodide and iodate to humic materials. This study was conducted to determine the iodide and iodate uptake potential for a particulate NOM (i.e., black carbon [BC]). A laboratory-produced BC and commercial humic acid were used for batch experiments to compare their iodine uptake properties. The BC exhibited >100 times greater uptake capability for iodide than iodate at low pH~3, while iodide uptake was negligible for the humic acid. The uptake properties of both solids strongly depend on the initial iodine aqueous concentrations. After uptake reaction of iodide to the BC, X-ray Absorption Fine Structure spectroscopy results indicated that the iodide was converted to electrophilic species, and iodine was covalently bound to carbon atom in polycyclic aromatic hydrocarbons present in the BC. The computed distribution coefficients (i.e., Kd values) suggest that the BC materials retard significantly the transport of iodide at low pH in environmental systems containing even a small amount of BC.

  2. Corals concentrate dissolved inorganic carbon to facilitate calcification.

    PubMed

    Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; Tudhope, Alexander W

    2014-12-22

    The sources of dissolved inorganic carbon (DIC) used to produce scleractinian coral skeletons are not understood. Yet this knowledge is essential for understanding coral biomineralization and assessing the potential impacts of ocean acidification on coral reefs. Here we use skeletal boron geochemistry to reconstruct the DIC chemistry of the fluid used for coral calcification. We show that corals concentrate DIC at the calcification site substantially above seawater values and that bicarbonate contributes a significant amount of the DIC pool used to build the skeleton. Corals actively increase the pH of the calcification fluid, decreasing the proportion of DIC present as CO2 and creating a diffusion gradient favouring the transport of molecular CO2 from the overlying coral tissue into the calcification site. Coupling the increases in calcification fluid pH and [DIC] yields high calcification fluid [CO3(2-)] and induces high aragonite saturation states, favourable to the precipitation of the skeleton.

  3. Seafloor Weathering Dependence on Temperature and Dissolved Inorganic Carbon

    NASA Astrophysics Data System (ADS)

    Abbot, D. S.; Farahat, N. X.; Archer, D. E.

    2015-12-01

    Most thinking on Earth's carbon cycle implicates silicate weathering as the dominant control of atmospheric CO2 concentration over long timescales. Recent analyses of alteration of basalt at the seafloor, however, suggest that seafloor weathering (low-temperature (<60C) chemical alteration of the upper oceanic crust due to hydrothermal seawater circulation) increases dramatically in warm, high CO2 periods of Earth's history. This raises the possibility that seafloor weathering could complement silicate weathering in maintaining Earth's long term climate stability. Moreover, seafloor weathering would be the only type of weathering available on an exoplanet entirely covered by water, so understanding how it might work is essential for understanding the habitable zones of such waterworlds. We have built a 2D numerical model of the flow of seawater through porous basalt coupled to chemical alteration reactions that can calculate alkalinity fluxes and carbonate deposition (seafloor weathering). I will present simulations in which we vary the seawater temperature and dissolved inorganic carbon concentration, which are boundary conditions to our model, over large ranges. These results will provide a constraint on the ability of seafloor weathering to act as an effective climate buffer on Earth and other planets. I can't give you a preview of the results yet because at the time of writing this abstract we haven't completed the simulations!

  4. Soil carbon dioxide partial pressure and dissolved inorganic carbonate chemistry under elevated carbon dioxide and ozone.

    PubMed

    Karberg, N J; Pregitzer, K S; King, J S; Friend, A L; Wood, J R

    2005-01-01

    Global emissions of atmospheric CO(2) and tropospheric O(3) are rising and expected to impact large areas of the Earth's forests. While CO(2) stimulates net primary production, O(3) reduces photosynthesis, altering plant C allocation and reducing ecosystem C storage. The effects of multiple air pollutants can alter belowground C allocation, leading to changes in the partial pressure of CO(2) (pCO(2)) in the soil , chemistry of dissolved inorganic carbonate (DIC) and the rate of mineral weathering. As this system represents a linkage between the long- and short-term C cycles and sequestration of atmospheric CO(2), changes in atmospheric chemistry that affect net primary production may alter the fate of C in these ecosystems. To date, little is known about the combined effects of elevated CO(2) and O(3) on the inorganic C cycle in forest systems. Free air CO(2) and O(3) enrichment (FACE) technology was used at the Aspen FACE project in Rhinelander, Wisconsin to understand how elevated atmospheric CO(2) and O(3) interact to alter pCO(2) and DIC concentrations in the soil. Ambient and elevated CO(2) levels were 360+/-16 and 542+/-81 microl l(-1), respectively; ambient and elevated O(3) levels were 33+/-14 and 49+/-24 nl l(-1), respectively. Measured concentrations of soil CO(2) and calculated concentrations of DIC increased over the growing season by 14 and 22%, respectively, under elevated atmospheric CO(2) and were unaffected by elevated tropospheric O(3). The increased concentration of DIC altered inorganic carbonate chemistry by increasing system total alkalinity by 210%, likely due to enhanced chemical weathering. The study also demonstrated the close coupling between the seasonal delta(13)C of soil pCO(2) and DIC, as a mixing model showed that new atmospheric CO(2) accounted for approximately 90% of the C leaving the system as DIC. This study illustrates the potential of using stable isotopic techniques and FACE technology to examine long- and short

  5. Reducing uncertainty in projections of terrestrial carbon uptake

    NASA Astrophysics Data System (ADS)

    Lovenduski, Nicole S.; Bonan, Gordon B.

    2017-04-01

    Carbon uptake by the oceans and terrestrial biosphere regulates atmospheric carbon dioxide concentration and affects Earth’s climate, yet global carbon cycle projections over the next century are highly uncertain. Here, we quantify and isolate the sources of projection uncertainty in cumulative ocean and terrestrial carbon uptake over 2006-2100 by performing an analysis of variance on output from an ensemble of 12 Earth System Models. Whereas uncertainty in projections of global ocean carbon accumulation by 2100 is <100 Pg C and driven primarily by emission scenario, uncertainty in projections of global terrestrial carbon accumulation by 2100 is >160 Pg C and driven primarily by model structure. To statistically reduce uncertainty in terrestrial carbon projections, we devise schemes to weight the models based on their ability to represent the observed change in carbon accumulation over 1959-2005. The weighting schemes incrementally reduce uncertainty to a minimum value of 125 Pg C in 2100, but this reduction requires an impractical observational constraint. We suggest that a focus on reducing multi-model spread may not make terrestrial carbon cycle projections more reliable, and instead advocate for accurate observations, improved process understanding, and a multitude of modeling approaches.

  6. Spring hydrology determines summer net carbon uptake in northern ecosystems

    NASA Astrophysics Data System (ADS)

    Yi, Yonghong; Kimball, John S.; Reichle, Rolf H.

    2014-05-01

    Increased photosynthetic activity and enhanced seasonal CO2 exchange of northern ecosystems have been observed from a variety of sources including satellite vegetation indices (such as the normalized difference vegetation index; NDVI) and atmospheric CO2 measurements. Most of these changes have been attributed to strong warming trends in the northern high latitudes (⩾50° N). Here we analyze the interannual variation of summer net carbon uptake derived from atmospheric CO2 measurements and satellite NDVI in relation to surface meteorology from regional observational records. We find that increases in spring precipitation and snow pack promote summer net carbon uptake of northern ecosystems independent of air temperature effects. However, satellite NDVI measurements still show an overall benefit of summer photosynthetic activity from regional warming and limited impact of spring precipitation. This discrepancy is attributed to a similar response of photosynthesis and respiration to warming and thus reduced sensitivity of net ecosystem carbon uptake to temperature. Further analysis of boreal tower eddy covariance CO2 flux measurements indicates that summer net carbon uptake is positively correlated with early growing-season surface soil moisture, which is also strongly affected by spring precipitation and snow pack based on analysis of satellite soil moisture retrievals. This is attributed to strong regulation of spring hydrology on soil respiration in relatively wet boreal and arctic ecosystems. These results document the important role of spring hydrology in determining summer net carbon uptake and contrast with prevailing assumptions of dominant cold temperature limitations to high-latitude ecosystems. Our results indicate potentially stronger coupling of boreal/arctic water and carbon cycles with continued regional warming trends.

  7. Spring Hydrology Determines Summer Net Carbon Uptake in Northern Ecosystems

    NASA Technical Reports Server (NTRS)

    Yi, Yonghong; Kimball, John; Reichle, Rolf H.

    2014-01-01

    Increased photosynthetic activity and enhanced seasonal CO2 exchange of northern ecosystems have been observed from a variety of sources including satellite vegetation indices (such as the Normalized Difference Vegetation Index; NDVI) and atmospheric CO2 measurements. Most of these changes have been attributed to strong warming trends in the northern high latitudes (greater than or equal to 50N). Here we analyze the interannual variation of summer net carbon uptake derived from atmospheric CO2 measurements and satellite NDVI in relation to surface meteorology from regional observational records. We find that increases in spring precipitation and snow pack promote summer net carbon uptake of northern ecosystems independent of air temperature effects. However, satellite NDVI measurements still show an overall benefit of summer photosynthetic activity from regional warming and limited impact of spring precipitation. This discrepancy is attributed to a similar response of photosynthesis and respiration to warming and thus reduced sensitivity of net ecosystem carbon uptake to temperature. Further analysis of boreal tower eddy covariance CO2 flux measurements indicates that summer net carbon uptake is positively correlated with early growing-season surface soil moisture, which is also strongly affected by spring precipitation and snow pack based on analysis of satellite soil moisture retrievals. This is attributed to strong regulation of spring hydrology on soil respiration in relatively wet boreal and arctic ecosystems. These results document the important role of spring hydrology in determining summer net carbon uptake and contrast with prevailing assumptions of dominant cold temperature limitations to high-latitude ecosystems. Our results indicate potentially stronger coupling of boreal/arctic water and carbon cycles with continued regional warming trends.

  8. Adhesion of preceramic inorganic polymer coatings to carbon fibers

    SciTech Connect

    Chaudhry, T.M.; Drzal, L.T.; Ho, H.; Laine, R.

    1996-12-31

    To determine whether the preceramic inorganic polymer coating can provide not only the thermal oxidative protection during both processing and use in metal matrix composites or ceramic matrix composites but also the appropriate composite properties, it is desirable to know how and at what point in the thermal processing cycle the coating-carbon fiber interface undergoes changes that affect the interfacial adhesion and failure mode. Also, it is important to identify the locus of interfacial failure i.e. between fiber and coating or between coating and matrix. This work is directed at determining the interfacial changes and the locus of failure in order to optimize both the coating chemistry and the conversion process. The characteristics of the benchmark interface coating material, silicon oxycarbide, SiO{sub x}C{sub y} or black glass have been studied. SiO{sub x}C{sub y} was chosen because (1) SiO{sub x}C{sub y} is amorphous, (2) it is possible to prepare very well-defined materials, where the chemistry and the evolution of the material with time and temperature are known in detail, and (3) SiO{sub x}C{sub y} is a matrix material used in commercial composites. It has been shown that these coatings are effective in increasing the oxidation resistance of the carbon fibers themselves.

  9. Multi-decadal uptake of carbon dioxide into subtropical mode water of the North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Bates, N. R.

    2012-07-01

    Natural climate variability impacts the multi-decadal uptake of anthropogenic carbon dioxide (Cant) into the North Atlantic Ocean subpolar and subtropical gyres. Previous studies have shown that there is significant uptake of CO2 into subtropical mode water (STMW) of the North Atlantic. STMW forms south of the Gulf Stream in winter and constitutes the dominant upper-ocean water mass in the subtropical gyre of the North Atlantic Ocean. Observations at the Bermuda Atlantic Time-series Study (BATS) site near Bermuda show an increase in dissolved inorganic carbon (DIC) of +1.51 ± 0.08 μmol kg-1 yr-1 between 1988 and 2011, but also an increase in ocean acidification indicators such as pH at rates (-0.0022 ± 0.0002 yr-1) higher than the surface ocean (Bates et al., 2012). It is estimated that the sink of CO2 into STMW was 0.985 ± 0.018 Pg C (Pg = 1015 g C) between 1988 and 2011 (70 ± 1.8% of which is due to uptake of Cant). The sink of CO2 into the STMW is 20% of the CO2 uptake in the North Atlantic Ocean between 14°-50° N (Takahashi et al., 2009). However, the STMW sink of CO2 was strongly coupled to the North Atlantic Oscillation (NAO), with large uptake of CO2 into STMW during the 1990s during a predominantly NAO positive phase. In contrast, uptake of CO2 into STMW was much reduced in the 2000s during the NAO neutral/negative phase. Thus, NAO induced variability of the STMW CO2 sink is important when evaluating multi-decadal changes in North Atlantic Ocean CO2 sinks.

  10. Lead uptake and lead loss in the fresh water field crab, Barytelphusa guerini, on exposure to organic and inorganic lead

    SciTech Connect

    Tulasi, S.J.; Yasmeen, R.; Reddy, C.P.; Rao, J.V.R.

    1987-07-01

    Lead is a heavy metal which is widely used in paint industry, pigments, dyes, electrical components and electronics, plastic chemicals and in various other things. Since some of the lead salts are soluble in water, lead presents a potential threat to aquatic organisms. Studies dealing with invertebrates include those on mortality, growth and lead uptake in Lymnaea palustris and bioaccumulation of heavy metals in oysters and mussels. Little information exists regarding the effect of lead on the fresh water crustaceans. Hence the present investigation has been undertaken to study the uptake and loss of lead on exposure to subtoxic levels or organic and inorganic lead.

  11. An observing system simulation for Southern Ocean carbon dioxide uptake.

    PubMed

    Majkut, Joseph D; Carter, Brendan R; Frölicher, Thomas L; Dufour, Carolina O; Rodgers, Keith B; Sarmiento, Jorge L

    2014-07-13

    The Southern Ocean is critically important to the oceanic uptake of anthropogenic CO2. Up to half of the excess CO2 currently in the ocean entered through the Southern Ocean. That uptake helps to maintain the global carbon balance and buffers transient climate change from fossil fuel emissions. However, the future evolution of the uptake is uncertain, because our understanding of the dynamics that govern the Southern Ocean CO2 uptake is incomplete. Sparse observations and incomplete model formulations limit our ability to constrain the monthly and annual uptake, interannual variability and long-term trends. Float-based sampling of ocean biogeochemistry provides an opportunity for transforming our understanding of the Southern Ocean CO2 flux. In this work, we review current estimates of the CO2 uptake in the Southern Ocean and projections of its response to climate change. We then show, via an observational system simulation experiment, that float-based sampling provides a significant opportunity for measuring the mean fluxes and monitoring the mean uptake over decadal scales. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  12. Inorganic carbon dominates total dissolved carbon concentrations and fluxes in British rivers: Application of the THINCARB model - Thermodynamic modelling of inorganic carbon in freshwaters.

    PubMed

    Jarvie, Helen P; King, Stephen M; Neal, Colin

    2017-01-01

    River water-quality studies rarely measure dissolved inorganic carbon (DIC) routinely, and there is a gap in our knowledge of the contributions of DIC to aquatic carbon fluxes and cycling processes. Here, we present the THINCARB model (THermodynamic modelling of INorganic CARBon), which uses widely-measured determinands (pH, alkalinity and temperature) to calculate DIC concentrations, speciation (bicarbonate, HCO3(-); carbonate, CO3(2-); and dissolved carbon dioxide, H2CO3(⁎)) and excess partial pressures of carbon dioxide (EpCO2) in freshwaters. If calcium concentration measurements are available, THINCARB also calculates calcite saturation. THINCARB was applied to the 39-year Harmonised Monitoring Scheme (HMS) dataset, encompassing all the major British rivers discharging to the coastal zone. Model outputs were combined with the HMS dissolved organic carbon (DOC) datasets, and with spatial land use, geology, digital elevation and hydrological datasets. We provide a first national-scale evaluation of: the spatial and temporal variability in DIC concentrations and fluxes in British rivers; the contributions of DIC and DOC to total dissolved carbon (TDC); and the contributions to DIC from HCO3(-) and CO3(2-) from weathering sources and H2CO3(⁎) from microbial respiration. DIC accounted for >50% of TDC concentrations in 87% of the HMS samples. In the seven largest British rivers, DIC accounted for an average of 80% of the TDC flux (ranging from 57% in the upland River Tay, to 91% in the lowland River Thames). DIC fluxes exceeded DOC fluxes, even under high-flow conditions, including in the Rivers Tay and Tweed, draining upland peaty catchments. Given that particulate organic carbon fluxes from UK rivers are consistently lower than DOC fluxes, DIC fluxes are therefore also the major source of total carbon fluxes to the coastal zone. These results demonstrate the importance of accounting for DIC concentrations and fluxes for quantifying carbon transfers from land

  13. Biogeochemistry: Large rise in carbon uptake by land plants

    NASA Astrophysics Data System (ADS)

    Yakir, Dan

    2017-04-01

    A proxy for the amount of carbon dioxide taken up by plants for photosynthesis has been used to estimate historical global uptake, revealing a large increase that might partly offset the rise in atmospheric CO2 levels. See Letter p.84

  14. Recent developments in inorganically filled carbon nanotubes: successes and challenges

    PubMed Central

    Gautam, Ujjal K; Costa, Pedro M F J; Bando, Yoshio; Fang, Xiaosheng; Li, Liang; Imura, Masataka; Golberg, Dmitri

    2010-01-01

    Carbon nanotubes (CNTs) are a unique class of nanomaterials that can be imagined as rolled graphene sheets. The inner hollow of a CNT provides an extremely small, one-dimensional space for storage of materials. In the last decade, enormous effort has been spent to produce filled CNTs that combine the properties of both the host CNT and the guest filling material. CNTs filled with various inorganic materials such as metals, alloys, semiconductors and insulators have been obtained using different synthesis approaches including capillary filling and chemical vapor deposition. Recently, several potential applications have emerged for these materials, such as the measurement of temperature at the nanoscale, nano-spot welding, and the storage and delivery of extremely small quantities of materials. A clear distinction between this class of materials and other nanostructures is the existence of an enormous interfacial area between the CNT and the filling matter. Theoretical investigations have shown that the lattice mismatch and strong exchange interaction of CNTs with the guest material across the interface should result in reordering of the guest crystal structure and passivation of the surface dangling bonds and thus yielding new and interesting physical properties. Despite preliminary successes, there remain many challenges in realizing applications of CNTs filled with inorganic materials, such as a comprehensive understanding of their growth and physical properties and control of their structural parameters. In this article, we overview research on filled CNT nanomaterials with special emphasis on recent progress and key achievements. We also discuss the future scope and the key challenges emerging out of a decade of intensive research on these fascinating materials. PMID:27877358

  15. Strongly coupled inorganic-nano-carbon hybrid materials for energy storage.

    PubMed

    Wang, Hailiang; Dai, Hongjie

    2013-04-07

    The global shift of energy production from fossil fuels to renewable energy sources requires more efficient and reliable electrochemical energy storage devices. In particular, the development of electric or hydrogen powered vehicles calls for much-higher-performance batteries, supercapacitors and fuel cells than are currently available. In this review, we present an approach to synthesize electrochemical energy storage materials to form strongly coupled hybrids (SC-hybrids) of inorganic nanomaterials and novel graphitic nano-carbon materials such as carbon nanotubes and graphene, through nucleation and growth of nanoparticles at the functional groups of oxidized graphitic nano-carbon. We show that the inorganic-nano-carbon hybrid materials represent a new approach to synthesize electrode materials with higher electrochemical performance than traditional counterparts made by simple physical mixtures of electrochemically active inorganic particles and conducting carbon materials. The inorganic-nano-carbon hybrid materials are novel due to possible chemical bonding between inorganic nanoparticles and oxidized carbon, affording enhanced charge transport and increased rate capability of electrochemical materials without sacrificing specific capacity. Nano-carbon with various degrees of oxidation provides a novel substrate for nanoparticle nucleation and growth. The interactions between inorganic precursors and oxidized-carbon substrates provide a degree of control over the morphology, size and structure of the resulting inorganic nanoparticles. This paper reviews the recent development of inorganic-nano-carbon hybrid materials for electrochemical energy storage and conversion, including the preparation and functionalization of graphene sheets and carbon nanotubes to impart oxygen containing groups and defects, and methods of synthesis of nanoparticles of various morphologies on oxidized graphene and carbon nanotubes. We then review the applications of the SC

  16. Sustainable carbon uptake - important ecosystem service within sustainable forest management

    NASA Astrophysics Data System (ADS)

    Zorana Ostrogović Sever, Maša; Anić, Mislav; Paladinić, Elvis; Alberti, Giorgio; Marjanović, Hrvoje

    2016-04-01

    Even-aged forest management with natural regeneration under continuous cover (i.e. close to nature management) is considered to be sustainable regarding the yield, biodiversity and stability of forest ecosystems. Recently, in the context of climate change, there is a raising question of sustainable forest management regarding carbon uptake. Aim of this research was to explore whether current close to nature forest management approach in Croatia can be considered sustainable in terms of carbon uptake throughout the life-time of Pedunculate oak forest. In state-owned managed forest a chronosequence experiment was set up and carbon stocks in main ecosystem pools (live biomass, dead wood, litter and mineral soil layer), main carbon fluxes (net primary production, soil respiration (SR), decomposition) and net ecosystem productivity were estimated in eight stands of different age (5, 13, 38, 53, 68, 108, 138 and 168 years) based on field measurements and published data. Air and soil temperature and soil moisture were recorded on 7 automatic mini-meteorological stations and weekly SR measurements were used to parameterize SR model. Carbon balance was estimated at weekly scale for the growing season 2011 (there was no harvesting), as well as throughout the normal rotation period of 140 years (harvesting was included). Carbon stocks in different ecosystem pools change during a stand development. Carbon stocks in forest floor increase with stand age, while carbon stocks in dead wood are highest in young and older stands, and lowest in middle-aged, mature stands. Carbon stocks in mineral soil layer were found to be stable across chronosequence with no statistically significant age-dependent trend. Pedunculate Oak stand, assuming successful regeneration, becomes carbon sink very early in a development phase, between the age of 5 and 13 years, and remains carbon sink even after the age of 160 years. Greatest carbon sink was reached in the stand aged 53 years. Obtained results

  17. Interactive effects of different inorganic As and Se species on their uptake and translocation by rice (Oryza sativa L.) seedlings.

    PubMed

    Hu, Ying; Duan, Gui-Lan; Huang, Yi-Zong; Liu, Yun-Xia; Sun, Guo-Xin

    2014-03-01

    There is a lack of information on the interactive relationship of absorption and transformation between two inorganic arsenic (As) species and two inorganic selenium (Se) species in rice grown under hydroponic condition. Interactive effects of inorganic As (As(III)) and (As(V)) and Se (Se(IV)and Se(VI)) species on their uptake, accumulation, and translocation in rice (Oryza sativa L.) seedlings were investigated in hydroponic culture. The results clearly showed the interactive effects of inorganic As and Se on their uptake by rice. The presence of Se reduced the sum of As species in the rice shoots regardless of Se speciation. If Se is present as Se(IV), then is it is accompanied by a corresponding increase of the sum of As species, but if Se is present as Se(VI), then there is no change in the sum of As species in rice roots. These effects are observed regardless of initial As speciation. When the rice plants are exposed to Se(IV), the presence of As increases the sum of Se species in the roots, and decreases the sum of Se species in the corresponding shoots. This effect is more pronounced for As(III) than for As(V). There is no effect on Se during exposure to Se(VI). Co-existence of As also increased SeMet in rice roots.

  18. Atypical Hydrogen Uptake on Chemically Activated, Ultramicroporous Carbon

    SciTech Connect

    Bhat, Vinay V; Contescu, Cristian I; Gallego, Nidia C; Baker, Frederick S

    2010-01-01

    Hydrogen adsorption at near-ambient temperatures on ultramicroporous carbon (UMC), derived through secondary chemical activation from a wood-based activated carbon was studied using volumetric and gravimetric methods. The results showed that physisorption is accompanied by a process of different nature that causes slow uptake at high pressures and hysteresis on desorption. In combination, this results in unusually high levels of hydrogen uptake at near-ambient temperatures and pressures (e.g. up to 0.8 wt % at 25 oC and 2 MPa). The heat of adsorption corresponding to the slow process leading to high uptake (17 20 kJ/mol) is higher than usually reported for carbon materials, but the adsorption kinetics is slow, and the isotherms exhibit pronounced hysteresis. These unusual properties were attributed to contributions from polarization-enhanced physisorption caused by traces of alkali metals residual from chemical activation. The results support the hypothesis that polarization-induced physisorption in high surface area carbons modified with traces of alkali metal ions is an alternate route for increasing the hydrogen storage capacity of carbon adsorbents.

  19. Bioengineering aspects of inorganic carbon supply to mass algal cultures. Final report

    SciTech Connect

    Goldman, J.C.

    1980-06-01

    The work included in this report is part of an ongoing study (currently funded by the Solar Energy Research Institute - Subcontract No. XR-9-8144-1) on the inorganic carbon requirements of microalgae under mass culture conditions and covers the period June 1, 1978 through May 31, 1979. It is divided into two parts appended herein. The first part is a literature review on the inorganic carbon chemical system in relation to algal growth requirements, and the second part deals with the kinetics of inorganic carbon-limited growth of two freshwater chlorophytes including the effect of carbon limitation on cellular chemical composition. Additional experiment research covered under this contract was reported in the Proceedings of the 3rd Annual Biomass Energy Systems Conferences, pp. 25-32, Bioengineering aspects of inorganic carbon supply to mass algal cultures. Report No. SERI/TP-33-285.

  20. Uptake of inorganic and organic nutrient species during cultivation of a Chlorella isolate in anaerobically digested dairy waste.

    PubMed

    Wahal, Shantanu; Viamajala, Sridhar

    2016-09-01

    A natural assemblage of microalgae from a facultative lagoon system treating municipal wastewater was enriched for growth in the effluents of an anaerobic digester processing dairy waste. A green microalga with close resemblance to Chlorella sp. was found to be dominant after multiple cycles of sub-culturing. Subsequently, the strain (designated as LLAI) was isolated and cultivated in 20× diluted digester effluents under various incident light intensities (255-1,100 µmoles m(-2) s(-1) ) to systematically assess growth and nutrient utilization. Our results showed that LLAI production increased with increasing incident light and a maximum productivity of 0.34 g L(-1) d(-1) was attained when the incident irradiance was 1,100 µmoles m(-2) s(-1) . Lack of growth in the absence of light indicated that the cultures did not grow heterotrophically on the organic compounds present in the medium. However, the cultures were able to uptake organic N and P under phototrophic conditions and our calculations suggest that the carbon associated with these organic nutrients contributed significantly to the production of biomass. Overall, under high light conditions, LLAI cultures utilized half of the soluble organic nitrogen and >90% of the ammonium, orthophosphate, and dissolved organic phosphorus present in the diluted waste. Strain LLAI was also found to accumulate triacylglycerides (TAG) even before the onset of nutrient limitation and a lipid productivity of 37 mg-TAG L(-1) d(-1) was measured in cultures incubated at an incident irradiance of 1,100 µmoles m(-2) s(-1) . The results of this study suggest that microalgae isolates from natural environments are well-suited for nutrient remediation and biomass production from wastewater containing diverse inorganic and organic nutrient species. © 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:1336-1342, 2016. © 2016 American Institute of Chemical Engineers.

  1. Inorganic carbon fluxes across the vadose zone of planted and unplanted soil mesocosms

    NASA Astrophysics Data System (ADS)

    Thaysen, E. M.; Jacques, D.; Jessen, S.; Andersen, C. E.; Laloy, E.; Ambus, P.; Postma, D.; Jakobsen, I.

    2014-12-01

    The efflux of carbon dioxide (CO2) from soils influences atmospheric CO2 concentrations and thereby climate change. The partitioning of inorganic carbon (C) fluxes in the vadose zone between emission to the atmosphere and to the groundwater was investigated to reveal controlling underlying mechanisms. Carbon dioxide partial pressure in the soil gas (pCO2), alkalinity, soil moisture and temperature were measured over depth and time in unplanted and planted (barley) mesocosms. The dissolved inorganic carbon (DIC) percolation flux was calculated from the pCO2, alkalinity and the water flux at the mesocosm bottom. Carbon dioxide exchange between the soil surface and the atmosphere was measured at regular intervals. The soil diffusivity was determined from soil radon-222 (222Rn) emanation rates and soil air Rn concentration profiles and was used in conjunction with measured pCO2 gradients to calculate the soil CO2 production. Carbon dioxide fluxes were modeled using the HP1 module of the Hydrus 1-D software. The average CO2 effluxes to the atmosphere from unplanted and planted mesocosm ecosystems during 78 days of experiment were 0.1 ± 0.07 and 4.9 ± 0.07 μmol C m-2 s-1, respectively, and grossly exceeded the corresponding DIC percolation fluxes of 0.01 ± 0.004 and 0.06 ± 0.03 μmol C m-2 s-1. Plant biomass was high in the mesocosms as compared to a standard field situation. Post-harvest soil respiration (Rs) was only 10% of the Rs during plant growth, while the post-harvest DIC percolation flux was more than one-third of the flux during growth. The Rs was controlled by production and diffusivity of CO2 in the soil. The DIC percolation flux was largely controlled by the pCO2 and the drainage flux due to low solution pH. Modeling suggested that increasing soil alkalinity during plant growth was due to nutrient buffering during root nitrate uptake.

  2. Dark inorganic carbon fixation sustains the functioning of benthic deep-sea ecosystems

    NASA Astrophysics Data System (ADS)

    Molari, Massimiliano; Manini, Elena; Dell'Anno, Antonio

    2013-01-01

    studies have provided evidence that dark inorganic carbon fixation is an important process for the functioning of the ocean interior. However, its quantitative relevance and ecological significance in benthic deep-sea ecosystems remain unknown. We investigated the rates of inorganic carbon fixation together with prokaryotic abundance, biomass, assemblage composition, and heterotrophic carbon production in surface sediments of different benthic deep-sea systems along the Iberian margin (northeastern Atlantic Ocean) and in the Mediterranean Sea. Inorganic carbon fixation rates in these surface deep-sea sediments did not show clear depth-related patterns, and, on average, they accounted for 19% of the total heterotrophic biomass production. The incorporation rates of inorganic carbon were significantly related to the abundance of total Archaea (as determined by catalyzed reporter deposition fluorescence in situ hybridization) and completely inhibited using an inhibitor of archaeal metabolism, N1-guanyl-1,7-diaminoheptane. This suggests a major role of the archaeal assemblages in inorganic carbon fixation. We also show that benthic archaeal assemblages contribute approximately 25% of the total 3H-leucine incorporation. Inorganic carbon fixation in surface deep-sea sediments appears to be dependent not only upon chemosynthetic processes but also on heterotrophic/mixotrophic metabolism, as suggested by estimates of the chemolithotrophic energy requirements and the enhanced inorganic carbon fixation due to the increase in the availability of organic trophic resources. Overall, our data suggest that archaeal assemblages of surface deep-sea sediments are responsible for the high rates of inorganic carbon incorporation and thereby sustain the functioning of the food webs as well as influence the carbon cycling of benthic deep-sea ecosystems.

  3. Carbon isotope fractionation of dissolved inorganic carbon (DIC) due to outgassing of carbon dioxide from a headwater stream

    Treesearch

    Daniel H. Doctor; Carol Kendall; Stephen D. Sebestyen; James B. Shanley; Nobuhito Ohte; Elizabeth W. Boyer

    2008-01-01

    The stable isotopic composition of dissolved inorganic carbon (δ13C-DIC) was investigated as a potential tracer of streamflow generation processes at the Sleepers River Research Watershed, Vermont, USA. Downstream sampling showed δ13C-DIC increased between 3-5% from the stream source to the outlet weir...

  4. On the reactive adsorption of ammonia on activated carbons modified by impregnation with inorganic compounds

    SciTech Connect

    Bandosz, T.J.; Petit, C.

    2009-10-15

    Ammonia adsorption was studied under dynamic conditions, at room temperature, on activated carbons of different origins (coal-based, wood-based and coconut-shell-based carbons) before and after their impregnation with various inorganic compounds including metal chlorides, metal oxides and polycations. The role of humidity was evaluated by running tests in both dry and moist conditions. Adsorbents were analyzed before and after exposure to ammonia by thermal analyses, sorption of nitrogen, potentiometric titration, X-ray diffraction and FTIR spectroscopy. Results of breakthrough tests show significant differences in terms of adsorption capacity depending on the parent carbon, the impregnates and the experimental conditions. It is found that surface chemistry governs ammonia adsorption on the impregnated carbons. More precisely, it was demonstrated that a proper combination of the surface pH, the strength, type and amount of functional groups present on the adsorbents' surface is a key point in ammonia uptake. Water can have either positive or negative effects on the performance of adsorbents. It can enhance NH{sub 3} adsorption capacity since it favors ammonia dissolution and thus enables reaction between ammonium ions and carboxylic groups from the carbons' surface. On the other hand, water can also reduce the performance from the strength of adsorption standpoint. It promotes dissolution of ammonia and that ammonia is first removed from the system when the adsorbent bed is purged with air. Ammonia, besides adsorption by van der Waals forces and dissolution in water, is also retained on the surface via reactive mechanisms such as acid-base reactions (Bronsted and Lewis) or complexation. Depending on the materials used and the experimental conditions, 6-47% ammonia adsorbed is strongly retained on the surface even when the bed is purged with air.

  5. On the reactive adsorption of ammonia on activated carbons modified by impregnation with inorganic compounds.

    PubMed

    Bandosz, Teresa J; Petit, Camille

    2009-10-15

    Ammonia adsorption was studied under dynamic conditions, at room temperature, on activated carbons of different origins (coal-based, wood-based and coconut-shell-based carbons) before and after their impregnation with various inorganic compounds including metal chlorides, metal oxides and polycations. The role of humidity was evaluated by running tests in both dry and moist conditions. Adsorbents were analyzed before and after exposure to ammonia by thermal analyses, sorption of nitrogen, potentiometric titration, X-ray diffraction and FTIR spectroscopy. Results of breakthrough tests show significant differences in terms of adsorption capacity depending on the parent carbon, the impregnates and the experimental conditions. It is found that surface chemistry governs ammonia adsorption on the impregnated carbons. More precisely, it was demonstrated that a proper combination of the surface pH, the strength, type and amount of functional groups present on the adsorbents' surface is a key point in ammonia uptake. Water can have either positive or negative effects on the performance of adsorbents. It can enhance NH(3) adsorption capacity since it favors ammonia dissolution and thus enables reaction between ammonium ions and carboxylic groups from the carbons' surface. On the other hand, water can also reduce the performance from the strength of adsorption standpoint. It promotes dissolution of ammonia and that ammonia is first removed from the system when the adsorbent bed is purged with air. Ammonia, besides adsorption by van der Waals forces and dissolution in water, is also retained on the surface via reactive mechanisms such as acid-base reactions (Brønsted and Lewis) or complexation. Depending on the materials used and the experimental conditions, 6-47% ammonia adsorbed is strongly retained on the surface even when the bed is purged with air.

  6. Global Land Carbon Uptake from Trait Distributions

    NASA Astrophysics Data System (ADS)

    Butler, E. E.; Datta, A.; Flores-Moreno, H.; Fazayeli, F.; Chen, M.; Wythers, K. R.; Banerjee, A.; Atkin, O. K.; Kattge, J.; Reich, P. B.

    2016-12-01

    Historically, functional diversity in land surface models has been represented through a range of plant functional types (PFTs), each of which has a single value for all of its functional traits. Here we expand the diversity of the land surface by using a distribution of trait values for each PFT. The data for these trait distributions is from a sub-set of the global database of plant traits, TRY, and this analysis uses three leaf traits: mass based nitrogen and phosphorus content and specific leaf area, which influence both photosynthesis and respiration. The data are extrapolated into continuous surfaces through two methodologies. The first, a categorical method, classifies the species observed in TRY into satellite estimates of their plant functional type abundances - analogous to how traits are currently assigned to PFTs in land surface models. Second, a Bayesian spatial method which additionally estimates how the distribution of a trait changes in accord with both climate and soil covariates. These two methods produce distinct patterns of diversity which are incorporated into a land surface model to estimate how the range of trait values affects the global land carbon budget.

  7. Impact of anthropogenic atmospheric nitrogen and sulfur deposition on ocean acidification and the inorganic carbon system.

    PubMed

    Doney, Scott C; Mahowald, Natalie; Lima, Ivan; Feely, Richard A; Mackenzie, Fred T; Lamarque, Jean-Francois; Rasch, Phil J

    2007-09-11

    Fossil fuel combustion and agriculture result in atmospheric deposition of 0.8 Tmol/yr reactive sulfur and 2.7 Tmol/yr nitrogen to the coastal and open ocean near major source regions in North America, Europe, and South and East Asia. Atmospheric inputs of dissociation products of strong acids (HNO(3) and H2SO(4)) and bases (NH(3)) alter surface seawater alkalinity, pH, and inorganic carbon storage. We quantify the biogeochemical impacts by using atmosphere and ocean models. The direct acid/base flux to the ocean is predominately acidic (reducing total alkalinity) in the temperate Northern Hemisphere and alkaline in the tropics because of ammonia inputs. However, because most of the excess ammonia is nitrified to nitrate (NO(3)(-)) in the upper ocean, the effective net atmospheric input is acidic almost everywhere. The decrease in surface alkalinity drives a net air-sea efflux of CO(2), reducing surface dissolved inorganic carbon (DIC); the alkalinity and DIC changes mostly offset each other, and the decline in surface pH is small. Additional impacts arise from nitrogen fertilization, leading to elevated primary production and biological DIC drawdown that reverses in some places the sign of the surface pH and air-sea CO(2) flux perturbations. On a global scale, the alterations in surface water chemistry from anthropogenic nitrogen and sulfur deposition are a few percent of the acidification and DIC increases due to the oceanic uptake of anthropogenic CO(2). However, the impacts are more substantial in coastal waters, where the ecosystem responses to ocean acidification could have the most severe implications for mankind.

  8. Impact of anthropogenic atmospheric nitrogen and sulfur deposition on ocean acidification and the inorganic carbon system

    PubMed Central

    Doney, Scott C.; Mahowald, Natalie; Lima, Ivan; Feely, Richard A.; Mackenzie, Fred T.; Lamarque, Jean-Francois; Rasch, Phil J.

    2007-01-01

    Fossil fuel combustion and agriculture result in atmospheric deposition of 0.8 Tmol/yr reactive sulfur and 2.7 Tmol/yr nitrogen to the coastal and open ocean near major source regions in North America, Europe, and South and East Asia. Atmospheric inputs of dissociation products of strong acids (HNO3 and H2SO4) and bases (NH3) alter surface seawater alkalinity, pH, and inorganic carbon storage. We quantify the biogeochemical impacts by using atmosphere and ocean models. The direct acid/base flux to the ocean is predominately acidic (reducing total alkalinity) in the temperate Northern Hemisphere and alkaline in the tropics because of ammonia inputs. However, because most of the excess ammonia is nitrified to nitrate (NO3−) in the upper ocean, the effective net atmospheric input is acidic almost everywhere. The decrease in surface alkalinity drives a net air–sea efflux of CO2, reducing surface dissolved inorganic carbon (DIC); the alkalinity and DIC changes mostly offset each other, and the decline in surface pH is small. Additional impacts arise from nitrogen fertilization, leading to elevated primary production and biological DIC drawdown that reverses in some places the sign of the surface pH and air–sea CO2 flux perturbations. On a global scale, the alterations in surface water chemistry from anthropogenic nitrogen and sulfur deposition are a few percent of the acidification and DIC increases due to the oceanic uptake of anthropogenic CO2. However, the impacts are more substantial in coastal waters, where the ecosystem responses to ocean acidification could have the most severe implications for mankind. PMID:17804807

  9. Comparative studies of inorganic carbon utilization in Emiliania huxleyi and some non-calcifying marine microalgae

    NASA Astrophysics Data System (ADS)

    Liang-Feng, Dong; Merrett, M. J.; Chao-Yuan, Wu

    1999-09-01

    Inorganic carbon utilization in the non-calcifying marine microalgae, Nannochloropsis oculata, Phaeodactylum tricornutum and Porphyridium purpureum was compared with high- and low-calcifying strains of Emiliania huxleyi grown in artificial seawater medium aerated with either air (0.03% V/V CO2) or CO2-free air. For high-calcifying strain of E. oculata and P. tricornutem, similar growth patterns were observed in air-and CO2-free air-grown cultures. P. purpureum showed a less final cell density in CO2-free air than in air-grown culture. However, low-calcifying strain of E. huxleyi was able to grow only in air-grown culture, but not in CO2-free air-grown culture. Measurements of alkalinity, pH, concentration of dissolved inorganic carbon (DIC) and free CO2 showed different patterns of DIC utilization. With N. oculata, P. tricornutum and P. purpureum the pattern of DIC utilization was characterized by an increase of pH and a decrease of DIC but a constant alkalinity in the cultures aerated with air or CO2-free air, suggesting that bicarbonate utilization was concomitant with an efflux of OH-. Both alkalinity and pH were maintained rather constant in air-grown culture of low-calcifying strain of E. huxleyi, suggesting that diffusive entry of CO2 could meet the requirement of DIC for its photosynthesis and growth. High-calcifying strain of E. huxleyi, however, showed a pattern of decrease of alkalinity and DIC but an almost constant pH, indicating that bicarbonate was the major form of inorganic carbon utilised by this organism and bicarbonate uptake is unlikely to be accompanied by an efflux of OH-. The final pH values reached by N. oculata, P. tricornutum and P. purpureum in a closed system were 10.75, 10.60 and 9.85 respectively, showing that bicarbonate utilisation is concomitant with an efflux of OH-. While the final pH of 8.4 in high-calcifying E. huxleyi suggests that bicarbonate utilization was not accompanied by an efflux of OH-.

  10. External carbonic anhydrase in three Caribbean corals: quantification of activity and role in CO2 uptake

    NASA Astrophysics Data System (ADS)

    Tansik, Anna L.; Fitt, William K.; Hopkinson, Brian M.

    2015-09-01

    Scleractinian corals have complicated inorganic carbon ( C i) transport pathways to support both photosynthesis, by their symbiotic dinoflagellates, and calcification. The first step in C i acquisition, uptake into the coral, is critical as the diffusive boundary layer limits the supply of CO2 to the surface and HCO3 - uptake is energy intensive. An external carbonic anhydrase (eCA) on the oral surface of corals is thought to facilitate CO2 uptake by converting HCO3 - into CO2, helping to overcome the limitation imposed by the boundary layer. However, this enzyme has not yet been identified or detected in corals, nor has its activity been quantified. We have developed a method to quantify eCA activity using a reaction-diffusion model to analyze data on 18O removal from labeled C i. Applying this technique to three species of Caribbean corals ( Orbicella faveolata, Porites astreoides, and Siderastrea radians) showed that all species have eCA and that the potential rates of CO2 generation by eCA greatly exceed photosynthetic rates. This demonstrates that eCA activity is sufficient to support its hypothesized role in CO2 supply. Inhibition of eCA severely reduces net photosynthesis in all species (on average by 46 ± 27 %), implying that CO2 generated by eCA is a major carbon source for photosynthesis. Because of the high permeability of membranes to CO2, CO2 uptake is likely driven by a concentration gradient across the cytoplasmic membrane. The ubiquity of eCA in corals from diverse genera and environments suggests that it is fundamental for photosynthetic CO2 supply.

  11. Methodologies for extraction of dissolved inorganic carbon for stable carbon isotope studies : evaluation and alternatives

    USGS Publications Warehouse

    Hassan, Afifa Afifi

    1982-01-01

    The gas evolution and the strontium carbonate precipitation techniques to extract dissolved inorganic carbon (DIC) for stable carbon isotope analysis were investigated. Theoretical considerations, involving thermodynamic calculations and computer simulation pointed out several possible sources of error in delta carbon-13 measurements of the DIC and demonstrated the need for experimental evaluation of the magnitude of the error. An alternative analytical technique, equilibration with out-gassed vapor phase, is proposed. The experimental studies revealed that delta carbon-13 of the DIC extracted from a 0.01 molar NaHC03 solution by both techniques agreed within 0.1 per mil with the delta carbon-13 of the DIC extracted by the precipitation technique, and an increase of only 0.27 per mil in that extracted by the gas evolution technique. The efficiency of extraction of DIC decreased with sulfate concentration in the precipitation technique but was independent of sulfate concentration in the gas evolution technique. Both the precipitation and gas evolution technique were found to be satisfactory for extraction of DIC from different kinds of natural water for stable carbon isotope analysis, provided appropriate precautions are observed in handling the samples. For example, it was found that diffusion of atmospheric carbon dioxide does alter the delta carbon-13 of the samples contained in polyethylene bottles; filtration and drying in the air change the delta carbon-13 of the samples contained in polyethylene bottles; filtration and drying in the air change the delta carbon-13 of the precipitation technique; hot manganese dioxide purification changes the delta carbon-13 of carbon dioxide. (USGS)

  12. Rapid Field Measurement of Dissolved Inorganic Carbon Based on CO{sub 2} Analysis

    SciTech Connect

    VESPER, DJ, Edenborn, Harry

    2012-01-01

    Dissolved inorganic carbon (DIC) is commonly measured in water and is an important parameter for understanding carbonate equilibrium, carbon cycling, and water-rock interaction. While accurate measurements can be made in the analytical laboratory, we have developed a rapid, portable technique that can be used to obtain accurate and precise data in the field as well.

  13. A simple, gravimetric method to quantify inorganic carbon in calcareous soils

    USDA-ARS?s Scientific Manuscript database

    Total carbon (TC) in calcareous soils has two components: inorganic carbon (IC) as calcite and or dolomite and organic carbon (OC) in the soil organic matter. The IC must be measured and subtracted from TC to obtain OC. Our objective was to develop a simple gravimetric technique to quantify IC. Th...

  14. Inorganic carbon dynamics of melt pond-covered first year sea ice in the Canadian Arctic

    NASA Astrophysics Data System (ADS)

    Geilfus, N.-X.; Galley, R. J.; Crabeck, O.; Papakyriakou, T.; Landy, J.; Tison, J.-L.; Rysgaard, S.

    2014-05-01

    Melt pond formation is a common feature of the spring and summer Arctic sea ice. However, the role of the melt ponds formation and the impact of the sea ice melt on both the direction and size of CO2 flux between air and sea is still unknown. Here we describe the CO2-carbonate chemistry of melting sea ice, melt ponds and the underlying seawater associated with measurement of CO2 fluxes across first year landfast sea ice in the Resolute Passage, Nunavut, in June 2012. Early in the melt season, the increase of the ice temperature and the subsequent decrease of the bulk ice salinity promote a strong decrease of the total alkalinity (TA), total dissolved inorganic carbon (TCO2) and partial pressure of CO2 (pCO2) within the bulk sea ice and the brine. Later on, melt pond formation affects both the bulk sea ice and the brine system. As melt ponds are formed from melted snow the in situ melt pond pCO2 is low (36 μatm). The percolation of this low pCO2 melt water into the sea ice matrix dilutes the brine resulting in a strong decrease of the in situ brine pCO2 (to 20 μatm). As melt ponds reach equilibrium with the atmosphere, their in situ pCO2 increase (up to 380 μatm) and the percolation of this high concentration pCO2 melt water increase the in situ brine pCO2 within the sea ice matrix. The low in situ pCO2 observed in brine and melt ponds results in CO2 fluxes of -0.04 to -5.4 mmol m-2 d-1. As melt ponds reach equilibrium with the atmosphere, the uptake becomes less significant. However, since melt ponds are continuously supplied by melt water their in situ pCO2 still remains low, promoting a continuous but moderate uptake of CO2 (~ -1mmol m-2 d-1). The potential uptake of atmospheric CO2 by melting sea ice during the Arctic summer has been estimated from 7 to 16 Tg of C ignoring the role of melt ponds. This additional uptake of CO2 associated to Arctic sea ice needs to be further explored and considered in the estimation of the Arctic Ocean's overall CO2 budget.

  15. Effects of upwelling, tides and biological processes on the inorganic carbon system of a coastal lagoon in Baja California

    NASA Astrophysics Data System (ADS)

    Ribas-Ribas, M.; Hernández-Ayón, J. M.; Camacho-Ibar, V. F.; Cabello-Pasini, A.; Mejia-Trejo, A.; Durazo, R.; Galindo-Bect, S.; Souza, A. J.; Forja, J. M.; Siqueiros-Valencia, A.

    2011-12-01

    The role of coastal lagoons and estuaries as sources or sinks of inorganic carbon in upwelling areas has not been fully understood. During the months of May-July, 2005, we studied the dissolved inorganic carbon system in a coastal lagoon of northwestern Mexico during the strongest period of upwelling events. Along the bay, different scenarios were observed for the distributions of pH, dissolved inorganic carbon (DIC) and apparent oxygen utilization (AOU) as a result of different combinations of upwelling intensity and tidal amplitude. DIC concentrations in the outer part of the bay were controlled by mixing processes. At the inner part of the bay DIC was as low as 1800 μmol kg -1, most likely due to high water residence times and seagrass CO 2 uptake. It is estimated that 85% of San Quintín Bay, at the oceanic end, acted as a source of CO 2 to the atmosphere due to the inflow of CO 2-rich upwelled waters from the neighboring ocean with high positive fluxes higher than 30 mmol C m -2 d -1. In contrast, there was a net uptake of CO 2 and HCO 3- by the seagrass bed Zostera marina in the inner part of the bay, so the pCO 2 in this zone was below the equilibrium value and slightly negative CO 2 fluxes of -6 mmol C m -2 d -1. Our positive NEP and ΔDIC values indicate that Bahía San Quintín was a net autotrophic system during the upwelling season during 2005.

  16. Controls of streamwater dissolved inorganic carbon dynamics in a forested watershed

    USGS Publications Warehouse

    Finlay, J.C.

    2003-01-01

    I investigated controls of stream dissolved inorganic carbon (DIC) sources and cycling along a stream size and productivity gradient in a temperate forested watershed in northern California. Dissolved CO2 (CO2 (aq)) dynamics in heavily shaded streams contrasted strongly with those of larger, open canopied sites. In streams with canopy cover > 97%, CO2 (aq) was highest during baseflow periods (up to 540 ??M) and was negatively related to discharge. Effects of algal photosynthesis on CO2 (aq) were minimal and stream CO2 (aq) was primarily controlled by groundwater CO2 (aq) inputs and degassing losses to the atmosphere. In contrast to the small streams. CO2 (aq) in larger, open-canopied streams was often below atmospheric levels at midday during baseflow and was positively related to discharge. Here, stream CO2 (aq) was strongly influenced by the balance between autotrophic and heterotrophic processes. Dynamics of HCO3- were less complex. HCO3- and Ca2+ were positively correlated, negatively related to discharge, and showed no pattern with stream size. Stable carbon isotope ratios of DIC (i.e. ??13C DIC) increased with stream size and discharge, indicating contrasting sources of DIC to streams and rivers. During summer baseflows, ??13C DIC were 13C-depleted in the smallest streams (minimum of -17.7???) due to the influence of CO2 (aq) derived from microbial respiration and HCO3- derived from carbonate weathering. ??13C DIC were higher (up to -6.6???) in the larger streams and rivers due to invasion of atmospheric CO2 enhanced by algal CO2 (aq) uptake. While small streams were influenced by groundwater inputs, patterns in CO2 (aq) and evidence from stable isotopes demonstrate the strong influence of stream metabolism and CO2 exchange with the atmosphere on stream and river carbon cycles.

  17. Earlier snowmelt reduces atmospheric carbon uptake in midlatitude subalpine forests

    NASA Astrophysics Data System (ADS)

    Winchell, Taylor S.; Barnard, David M.; Monson, Russell K.; Burns, Sean P.; Molotch, Noah P.

    2016-08-01

    Previous work demonstrates conflicting evidence regarding the influence of snowmelt timing on forest net ecosystem exchange (NEE). Based on 15 years of eddy covariance measurements in Colorado, years with earlier snowmelt exhibited less net carbon uptake during the snow ablation period, which is a period of high potential for productivity. Earlier snowmelt aligned with colder periods of the seasonal air temperature cycle relative to later snowmelt. We found that the colder ablation-period air temperatures during these early snowmelt years lead to reduced rates of daily NEE. Hence, earlier snowmelt associated with climate warming, counterintuitively, leads to colder atmospheric temperatures during the snow ablation period and concomitantly reduced rates of net carbon uptake. Using a multilinear-regression (R2 = 0.79, P < 0.001) relating snow ablation period mean air temperature and peak snow water equivalent (SWE) to ablation-period NEE, we predict that earlier snowmelt and decreased SWE may cause a 45% reduction in midcentury ablation-period net carbon uptake.

  18. Dissolved inorganic carbon dynamics in a high arctic glacial watershed

    NASA Astrophysics Data System (ADS)

    St Pierre, K.; St Louis, V. L.; Schiff, S. L.; Aukes, P.; Dainard, P.; Lehnherr, I.

    2016-12-01

    In the Canadian Arctic Archipelago, glacial mass loss has accelerated dramatically since the start of the 2000s. While the characterization of the sub-glacial drainage system and its meltwaters have received considerable attention, we know yet little about the quality of these meltwaters as they exit the glacier and flow into receiving freshwater ecosystems. Due to high rates of coupled physical and chemical weathering of geological material, glacial meltwaters could have important consequences for dissolved inorganic carbon (DIC) chemistry in freshwater systems, particularly in determining whether these ultra-oligotrophic freshwaters are sources or sinks of carbon dioxide (CO2). Efforts to quantify CO2 fluxes in the High Arctic at the watershed scale have largely focused on the terrestrial environment, so far leaving the role of large glacier-fed lake ecosystems unresolved. At 540 km2 and 267 m deep, Lake Hazen on northern Ellesmere Island (81°N, 71°W) is the world's largest high arctic lake by volume. Its 7400-km2 watershed is just over a third glaciated and is underlain by permafrost. Since 2005, glacial run-off into the lake has increased 10 fold, as have sedimentation rates. Our objectives were three-fold: 1) to assess temporal variability in pCO2 dynamics during the melt season in glacial rivers; 2) to assess spatial variability in pCO2 in different rivers throughout the watershed; and, 3) to determine the impact of glacial meltwaters on Lake Hazen as a source or sink of CO2 to the atmosphere. During summers 2015 and 2016, we completed detailed DIC, pCO2 and chemical surveys of 7 glacial rivers in the Lake Hazen watershed. From 2013-2016, we also completed DIC, pCO2 and chemical depth profiles in Lake Hazen itself. Spring under ice profiles of the lake indicate the build-up of CO2 and depletion of O2 at depth, suggesting respiration of organic matter at the bottom of the lake over winter. However, dense, turbid glacial rivers form underflow currents upon

  19. Photoproduction of dissolved inorganic carbon in Swedish lakes

    NASA Astrophysics Data System (ADS)

    Koehler, B.; Landelius, T.; Tranvik, L. J.

    2012-04-01

    A substantial fraction of the dissolved organic carbon (DOC) in inland waters is mineralized to dissolved inorganic carbon (DIC) during passage towards the sea. Both microbial and photochemical mineralization have a share but there is currently no landscape-scale estimate of the contribution of photomineralization to total lake carbon dioxide emissions, restricting our understanding of inland-water C cycling. We use 1) DOC absorbance spectra measured during autumn 2009 in water samples from 1074 lakes distributed across Sweden, 2) light attenuation coefficients estimated based on correlations with absorption coefficients as established from literature data, 3) cloud-corrected, below-water-surface downwelling scalar irradiance spectra derived by modeling radiative transfer in the atmosphere and transmission into the water and 4) an apparent quantum yield spectrum determined in a humic lake, to calculate spectra of DIC photoproduction from 280 to 600 nm and from the water surface down to the mean lake depths. For each lake, we calculate DIC photoproduction rates on a daily base and integrate to obtain yearly flux estimates. Preliminary model results calculated for July 2009 show that, even though water color differed largely (25%- and 75%-quantiles of specific UV absorption coefficients at 254 nm (SUV A254) of 6.4 and 9.6 L mg C-1 m-1, respectively), depth-integrated DIC photoproduction rates showed a relatively small variation with a 25%-quantile of 12.0 and a 75%-quantile of 13.1 mg C m-2 day-1. These rather similar DIC photoproduction rates are explained by their different depth distributions: The brownest lake with a SUV A254 of 12.9 L mg C-1 m-1 had large surface DIC photoproduction rates of 887.9 mg C m-3 day-1 but photons were quickly attenuated with depth, with DIC photoproduction rates falling below 1 mg C m-3 day-1 already at ¯ 0.2 m depth (depth-integrated rate of 14.2 mg C m-2 day-1). The clearest lake with a SUV A254 of 1.4 L mg C-1 m-1 had nearly 100

  20. Enhancement of inorganic Martian dust simulant with carbon component and its effects on key characteristics of glutamatergic neurotransmission

    NASA Astrophysics Data System (ADS)

    Borisova, Tatiana; Krisanova, Natalia; Nazarova, Anastasiya; Borysov, Arseniy; Pastukhov, Artem; Pozdnyakova, Natalia; Dudarenko, Marina

    2016-07-01

    Evidence on the past existence of subsurface organic-bearing fluids on Mars was recently achieved basing on the investigation of organic carbon from the Tissint Martian meteorite (Lin et al., 2014). Tremendous amount of meteorites containing abundant carbon and carbon-enriched dust particles have reached the Earth daily (Pizzarello and Shock 2010). National Institute of Environmental Health Sciences/National Institute of Health panel of research scientists revealed recently that accumulating evidences suggest that nano-sized air pollution may have a significant impact on central nervous system in health and disease (Block et al., Neurotoxicology, 2012). During inhalation, nano-/microsized particles are efficiently deposited in nasal, tracheobronchial, and alveolar regions and can be transported to the central nervous system (Oberdorster et al., 2004). Based on above facts, the aims of this study were: 1) to upgrade inorganic Martian dust stimulant derived from volcanic ash (JSC-1a/JSC, ORBITEC Orbital Technologies Corporation, Madison, Wisconsin) by the addition of carbon components, that is, nanodiamonds; 2) to analyse acute effects of upgraded stimulant on the key characteristic of synaptic neurotransmission and to compare its effects with those of inorganic dust and carbon components per se. Acute administration of carbon-containing Martian dust analogue resulted in a significant decrease in Na+-dependent uptake of L-[14C]glutamate that is the major excitatory neurotransmitter in the central nervous system (CNS). The ambient level of the neurotransmitter in the preparation of isolated rat brain nerve terminals increased in the presence of carbon-contained Martian dust analogue. This fact indicated that carbon component of native Martian dust can have deleterious effects on extracellular glutamate homeostasis in the CNS, and so glutamatergic neurtransmission.

  1. Carbonation and CO{sub 2} uptake of concrete

    SciTech Connect

    Yang, Keun-Hyeok; Seo, Eun-A; Tae, Sung-Ho

    2014-04-01

    This study developed a reliable procedure to assess the carbon dioxide (CO{sub 2}) uptake of concrete by carbonation during the service life of a structure and by the recycling of concrete after demolition. To generalize the amount of absorbable CO{sub 2} per unit volume of concrete, the molar concentration of carbonatable constituents in hardened cement paste was simplified as a function of the unit content of cement, and the degree of hydration of the cement paste was formulated as a function of the water-to-cement ratio. The contribution of the relative humidity, type of finishing material for the concrete surface, and the substitution level of supplementary cementitious materials to the CO{sub 2} diffusion coefficient in concrete was reflected using various correction factors. The following parameters varying with the recycling scenario were also considered: the carbonatable surface area of concrete crusher-runs and underground phenomena of the decreased CO{sub 2} diffusion coefficient and increased CO{sub 2} concentration. Based on the developed procedure, a case study was conducted for an apartment building with a principal wall system and an office building with a Rahmen system, with the aim of examining the CO{sub 2} uptake of each structural element under different exposure environments during the service life and recycling of the building. As input data necessary for the case study, data collected from actual surveys conducted in 2012 in South Korea were used, which included data on the surrounding environments, lifecycle inventory database, life expectancy of structures, and recycling activity scenario. Ultimately, the CO{sub 2} uptake of concrete during a 100-year lifecycle (life expectancy of 40 years and recycling span of 60 years) was estimated to be 15.5%–17% of the CO{sub 2} emissions from concrete production, which roughly corresponds to 18%–21% of the CO{sub 2} emissions from the production of ordinary Portland cement. - Highlights: • CO

  2. Carbons for lithium ion cells prepared using sepiolite as an inorganic template.

    SciTech Connect

    Sandi, G.

    1998-12-09

    Carbon anodes for Li ion cells have been prepared by the in situ polymerization of olefins such as propylene and ethylene in the channels of sepiolite clay mineral. Upon dissolution of the inorganic framework, a disordered carbon was obtained. The carbon was tested as anode in coin cells, yielding a reversible capacity of 633 mAh/g, 1.70 times higher than the capacity delivered by graphitic carbon, assuming 100% efficiency. The coulombic efficiency was higher than 90%.

  3. Soil Inorganic Carbon Sequestration Following Afforestation Is Probably Induced by Pedogenic Carbonate Formation in Northwest China.

    PubMed

    Gao, Yang; Tian, Jing; Pang, Yue; Liu, Jiabin

    2017-01-01

    In arid and semiarid areas, the effects of afforestation on soil organic carbon (SOC) have received considerable attention. In these areas, in fact, soil inorganic carbon (SIC), rather than SOC, is the dominant form of carbon, with a reservoir approximately 2-10 times larger than that of SOC. A subtle fluctuation of SIC pool can strongly alter the regional carbon budget. However, few studies have focused on the variations in SIC, or have used stable soil carbon isotopes to analyze the reason for SIC variations following afforestation in degraded semiarid lands. In the Mu Us Desert, northwest China, we selected a shifting sand land (SL) and three nearby forestlands (Populus alba) with ages of 8 (P-8), 20 (P-20) and 30 (P-30) years, and measured SIC, SOC, soil organic and inorganic δ(13)C values (δ(13)C-SOC and δ(13)C-SIC) and other soil properties. The results showed that SIC stock at 0-100 cm in SL was 34.2 Mg ha(-1), and it increased significantly to 42.5, 49.2, and 68.3 Mg ha(-1) in P-8, P-20, and P-30 lands, respectively. Both δ(13)C-SIC and δ(13)C-SOC within the 0-100 cm soil layer in the three forestlands were more negative than those in SL, and gradually decreased with plantation age. Afforestation elevated soil fine particles only at a depth of 0-40 cm. The entire dataset (260 soil samples) exhibited a negative correlation between δ(13)C-SIC and SIC content (R(2) = 0.71, P < 0.01), whereas it showed positive correlation between SOC content and SIC content (R(2) = 0.52, P < 0.01) and between δ(13)C-SOC and δ(13)C-SIC (R(2) = 0.63, P < 0.01). However, no correlation was observed between SIC content and soil fine particles. The results indicated that afforestation on shifting SL has a high potential to sequester SIC in degraded semiarid regions. The contribution of soil fine particle deposition by canopy to SIC sequestration is limited. The SIC sequestration following afforestation is very probably caused by pedogenic carbonate formation, which is

  4. Inorganic membranes for carbon capture and power generation

    NASA Astrophysics Data System (ADS)

    Snider, Matthew T.

    Inorganic membranes are under consideration for cost-effective reductions of carbon emissions from coal-fired power plants, both in the capture of pollutants post-firing and in the direct electrochemical conversion of coal-derived fuels for improved plant efficiency. The suitability of inorganic membrane materials for these purposes stems as much from thermal and chemical stability in coal plant operating conditions as from high performance in gas separations and power generation. Hydrophilic, micro-porous zeolite membrane structures are attractive for separating CO2 from N2 in gaseous waste streams due to the attraction of CO2 to the membrane surface and micropore walls that gives the advantage to CO2 transport. Recent studies have indicated that retention of the templating agent used in zeolite synthesis can further block N2 from the micropore interior and significantly improve CO2/N2 selectivity. However, the role of the templating agent in micro-porous transport has not been well investigated. In this work, gas sorption studies were conducted by high-pressure thermo-gravimetric analysis on Zeolite Y membrane materials to quantify the effect of the templating agent on CO2, N2, and H2O adsorption/desorption, as well as to examine the effect of humidification on overall membrane performance. In equilibrium conditions, the N2 sorption enthalpy was nearly unchanged by the presence of the templating agent, but the N2 pore occupation was reduced ˜1000x. Thus, the steric nature of the blocking of N2 from the micropores by the templating agent was confirmed. CO2 and H2O sorption enthalpies were similarly unaffected by the templating agent, and the micropore occupations were only reduced as much as the void volume taken up by the templating agent. Thus, the steric blocking effect did not occur for molecules more strongly attracted to the micropore walls. Additionally, in time-transient measurements the CO 2 and H2O mobilities were significantly enhanced by the presence

  5. Inorganic carbon and fossil organic carbon are source of bias for quantification of sequestered carbon in mine spoil

    NASA Astrophysics Data System (ADS)

    Vindušková, Olga; Frouz, Jan

    2016-04-01

    Carbon sequestration in mine soils has been studied as a possibility to mitigate the rising atmospheric CO2 levels and to improve mine soil quality (Vindu\\vsková and Frouz, 2013). Moreover, these soils offer an unique opportunity to study soil carbon dynamics using the chronosequence approach (using a set of sites of different age on similar parent material). However, quantification of sequestered carbon in mine soils is often complicated by fossil organic carbon (e.g., from coal or kerogen) or inorganic carbon present in the spoil. We present a methodology for quantification of both of these common constituents of mine soils. Our recommendations are based on experiments done on post-mining soils in Sokolov basin, Czech Republic. Here, fossil organic carbon is present mainly as kerogen Type I and II and represents 2-6 wt.% C in these soils. Inorganic carbon in these soils is present mainly as siderite (FeCO3), calcite (CaCO3), and dolomite (CaMg(CO3)2). All of these carbonates are often found in the overburden of coal seams thus being a common constituent of post-mining soils in the world. Vindu\\vsková O, Frouz J, 2013. Soil carbon accumulation after open-cast coal and oil shale mining in Northern Hemisphere: a quantitative review. ENVIRONMENTAL EARTH SCIENCES, 69: 1685-1698. Vindu\\vsková O, Dvořáček V, Prohasková A, Frouz J. 2014. Distinguishing recent and fossil organic matter - A critical step in evaluation of post-mining soil development - using near infrared spectroscopy. ECOLOGICAL ENGINEERING. 73: 643-648. Vindu\\vsková O, Sebag D, Cailleau G, Brus J, Frouz J. 2015. Methodological comparison for quantitative analysis of fossil and recently derived carbon in mine soils with high content of aliphatic kerogen. ORGANIC GEOCHEMISTRY, 89-90:14-22.

  6. Solute specific scaling of inorganic nitrogen and phosphorus uptake in streams

    NASA Astrophysics Data System (ADS)

    Hall, R. O., Jr.; Baker, M. A.; Rosi-Marshall, E. J.; Tank, J. L.

    2013-04-01

    Stream ecosystem processes such as nutrient cycling may vary with stream position in the watershed. Using a scaling approach, we examined the relationship between stream size and nutrient uptake length, which represents the mean distance that a dissolved solute travels prior to removal from the water column. Ammonium uptake length increased proportionally with stream size measured as specific discharge (discharge/stream width) with a scaling exponent = 1.01. In contrast, the scaling exponent for nitrate (NO3-) was 1.19 and for soluble reactive phosphorus (SRP) was 1.35, suggesting that uptake lengths for these nutrients increased more rapidly than increases in specific discharge. Additionally, the ratio of nitrogen (N) uptake length to SRP uptake length declined with stream size; there was lower demand for SRP relative to N as stream size increased. Ammonium and NO3- uptake velocity positively related with stream metabolism, while SRP did not. Finally, we related the scaling of uptake length and specific discharge to that of stream length using Hack's law and downstream hydraulic geometry. Ammonium uptake length increased less than proportionally with distance from the headwaters, suggesting a strong role for larger streams and rivers in regulating nutrient transport.

  7. Temperature Dependence of Photodegradation of Dissolved Organic Matter to Dissolved Inorganic Carbon and Particulate Organic Carbon

    PubMed Central

    Porcal, Petr; Dillon, Peter J.; Molot, Lewis A.

    2015-01-01

    Photochemical transformation of dissolved organic matter (DOM) has been studied for more than two decades. Usually, laboratory or “in-situ” experiments are used to determine photodegradation variables. A common problem with these experiments is that the photodegradation experiments are done at higher than ambient temperature. Five laboratory experiments were done to determine the effect of temperature on photochemical degradation of DOM. Experimental results showed strong dependence of photodegradation on temperature. Mathematical modeling of processes revealed that two different pathways engaged in photochemical transformation of DOM to dissolved inorganic carbon (DIC) strongly depend on temperature. Direct oxidation of DOM to DIC dominated at low temperatures while conversion of DOM to intermediate particulate organic carbon (POC) prior to oxidation to DIC dominated at high temperatures. It is necessary to consider this strong dependence when the results of laboratory experiments are interpreted in regard to natural processes. Photodegradation experiments done at higher than ambient temperature will necessitate correction of rate constants. PMID:26106898

  8. Coral Uptake of Inorganic Phosphorus and Nitrogen Negatively Affected by Simultaneous Changes in Temperature and pH

    PubMed Central

    Godinot, Claire; Houlbrèque, Fanny

    2011-01-01

    The effects of ocean acidification and elevated seawater temperature on coral calcification and photosynthesis have been extensively investigated over the last two decades, whereas they are still unknown on nutrient uptake, despite their importance for coral energetics. We therefore studied the separate and combined impacts of increases in temperature and pCO2 on phosphate, ammonium, and nitrate uptake rates by the scleractinian coral S. pistillata. Three experiments were performed, during 10 days i) at three pHT conditions (8.1, 7.8, and 7.5) and normal temperature (26°C), ii) at three temperature conditions (26°, 29°C, and 33°C) and normal pHT (8.1), and iii) at three pHT conditions (8.1, 7.8, and 7.5) and elevated temperature (33°C). After 10 days of incubation, corals had not bleached, as protein, chlorophyll, and zooxanthellae contents were the same in all treatments. However, photosynthetic rates significantly decreased at 33°C, and were further reduced for the pHT 7.5. The photosynthetic efficiency of PSII was only decreased by elevated temperature. Nutrient uptake rates were not affected by a change in pH alone. Conversely, elevated temperature (33°C) alone induced an increase in phosphate uptake but a severe decrease in nitrate and ammonium uptake rates, even leading to a release of nitrogen into seawater. Combination of high temperature (33°C) and low pHT (7.5) resulted in a significant decrease in phosphate and nitrate uptake rates compared to control corals (26°C, pHT = 8.1). These results indicate that both inorganic nitrogen and phosphorus metabolism may be negatively affected by the cumulative effects of ocean warming and acidification. PMID:21949839

  9. Coral uptake of inorganic phosphorus and nitrogen negatively affected by simultaneous changes in temperature and pH.

    PubMed

    Godinot, Claire; Houlbrèque, Fanny; Grover, Renaud; Ferrier-Pagès, Christine

    2011-01-01

    The effects of ocean acidification and elevated seawater temperature on coral calcification and photosynthesis have been extensively investigated over the last two decades, whereas they are still unknown on nutrient uptake, despite their importance for coral energetics. We therefore studied the separate and combined impacts of increases in temperature and pCO(2) on phosphate, ammonium, and nitrate uptake rates by the scleractinian coral S. pistillata. Three experiments were performed, during 10 days i) at three pH(T) conditions (8.1, 7.8, and 7.5) and normal temperature (26°C), ii) at three temperature conditions (26°, 29°C, and 33°C) and normal pH(T) (8.1), and iii) at three pH(T) conditions (8.1, 7.8, and 7.5) and elevated temperature (33°C). After 10 days of incubation, corals had not bleached, as protein, chlorophyll, and zooxanthellae contents were the same in all treatments. However, photosynthetic rates significantly decreased at 33°C, and were further reduced for the pH(T) 7.5. The photosynthetic efficiency of PSII was only decreased by elevated temperature. Nutrient uptake rates were not affected by a change in pH alone. Conversely, elevated temperature (33°C) alone induced an increase in phosphate uptake but a severe decrease in nitrate and ammonium uptake rates, even leading to a release of nitrogen into seawater. Combination of high temperature (33°C) and low pH(T) (7.5) resulted in a significant decrease in phosphate and nitrate uptake rates compared to control corals (26°C, pH(T) = 8.1). These results indicate that both inorganic nitrogen and phosphorus metabolism may be negatively affected by the cumulative effects of ocean warming and acidification.

  10. Carbon isotope signature of dissolved inorganic carbon (DIC) in precipitation and atmospheric CO2.

    PubMed

    Górka, Maciej; Sauer, Peter E; Lewicka-Szczebak, Dominika; Jędrysek, Mariusz-Orion

    2011-01-01

    This paper describes results of chemical and isotopic analysis of inorganic carbon species in the atmosphere and precipitation for the calendar year 2008 in Wrocław (SW Poland). Atmospheric air samples (collected weekly) and rainwater samples (collected after rain episodes) were analysed for CO2 and dissolved inorganic carbon (DIC) concentrations and for δ13C composition. The values obtained varied in the ranges: atmospheric CO2: 337-448 ppm; δ13CCO2 from -14.4 to -8.4‰; DIC in precipitation: 0.6-5.5 mg dm(-3); δ13CDIC from -22.2 to +0.2‰. No statistical correlation was observed between the concentration and δ13C value of atmospheric CO2 and DIC in precipitation. These observations contradict the commonly held assumption that atmospheric CO2 controls the DIC in precipitation. We infer that DIC is generated in ambient air temperatures, but from other sources than the measured atmospheric CO2. The calculated isotopic composition of a hypothetical CO2 source for DIC forming ranges from -31.4 to -11.0‰, showing significant seasonal variations accordingly to changing anthropogenic impact and atmospheric mixing processes.

  11. Study of inorganic fullerenes and carbon nanotubes by in situ Raman tribometry

    NASA Astrophysics Data System (ADS)

    Joly-Pottuz, L.; Martin, J. M.; Belin, M.; Dassenoy, F.; Montagnac, G.; Reynard, B.

    2007-10-01

    Nanoparticles such as inorganic fullerenes of metal dichalcogenides or carbon nanotubes have been recently used as lubricant additives and they present excellent tribological properties. Raman spectroscopy is a useful technique to follow modification of these two structures. We developed an original tribometer able to perform in situ Raman analyses during sliding steel on a sapphire flat. These analyses gave unique information on real-time structural changes of nanoparticles inside the contact area: inorganic fullerenes are tribologically active by a progressive exfoliation process and carbon nanotubes is changed to amorphous carbon. Lubrication mechanism of these particles are explained in the light of analytical results.

  12. Inorganic carbon turnover caused by digestion of carbonate sands and metabolic activity of holothurians

    NASA Astrophysics Data System (ADS)

    Schneider, Kenneth; Silverman, Jacob; Kravitz, Ben; Rivlin, Tanya; Schneider-Mor, Aya; Barbosa, Sergio; Byrne, Maria; Caldeira, Ken

    2013-11-01

    Recent measurements have shown that holothurians (sea cucumbers) may play an important role in the cycling of CaCO3 in tropical coral reef systems through ingestion and processing of carbonate sediment. In this report, we present estimates of inorganic carbon turnover rates determined from laboratory incubations of Holothuria atra, Holothuria leucospilota and Stichopus herrmanni. The pH values of the gut lumen ranged from 7.0 to 7.6 when digestive tracts were filled with sediment compared with 6.1-6.7 in animals with empty digestive tracts. Empty gut volume estimates for H. atra and S. herrmanni were 36 ± 4 mL and 151 ± 14 mL, respectively. Based on these measurements and the density and porosity of carbonate sediments of coral reefs, it is estimated that these species process 19 ± 2 kg and 80 ± 7 kg CaCO3 sand yr-1 per individual, respectively. The annual CaCO3 dissolution rates per H. atra and S. herrmanni individual are estimated to be 6.5 ± 1.9 g and 9.6 ± 1.4 g, respectively, suggesting that 0.05 ± 0.02% and 0.1 ± 0.02% of the CaCO3 processed through their gut annually is dissolved. During incubations the CaCO3 dissolution of the fecal casts was 0.07 ± 0.01%, 0.04 ± 0.01% and 0.21 ± 0.05% for H. atra, H. leucospilota and S. herrmanni, respectively. The CaCO3 saturation state in the incubation seawater decreased markedly due to a greater increase in dissolved inorganic carbon (DIC) relative to total alkalinity (AT) as a result of respiration by the animals. Our results support the hypothesis that deposit feeders such as sea cucumbers play an important ecological role in the coral reef CaCO3 cycle.

  13. Bioengineering Aspects of Inorganic Carbon Supply to Mass Algal Cultures: Final Report

    SciTech Connect

    Goldman, J. C.

    1981-04-01

    Regardless of the application, the basic biotechnology of large-scale outdoor cultures involves many common features, particularly in the requirement for adequate nutrients such as carbon, nitrogen, and phosphorus to ensure that light is the sole limiting yield determinant. Whereas the required quantities of nitrogen and phosphorus are fairly simple, to estimate, those for inorganic carbon are far more complex.

  14. Adsorption uptake of synthetic organic chemicals by carbon nanotubes and activated carbons

    NASA Astrophysics Data System (ADS)

    Brooks, A. J.; Lim, Hyung-nam; Kilduff, James E.

    2012-07-01

    Carbon nanotubes (CNTs) have shown great promise as high performance materials for adsorbing priority pollutants from water and wastewater. This study compared uptake of two contaminants of interest in drinking water treatment (atrazine and trichloroethylene) by nine different types of carbonaceous adsorbents: three different types of single walled carbon nanotubes (SWNTs), three different sized multi-walled nanotubes (MWNTs), two granular activated carbons (GACs) and a powdered activated carbon (PAC). On a mass basis, the activated carbons exhibited the highest uptake, followed by SWNTs and MWNTs. However, metallic impurities in SWNTs and multiple walls in MWNTs contribute to adsorbent mass but do not contribute commensurate adsorption sites. Therefore, when uptake was normalized by purity (carbon content) and surface area (instead of mass), the isotherms collapsed and much of the CNT data was comparable to the activated carbons, indicating that these two characteristics drive much of the observed differences between activated carbons and CNT materials. For the limited data set here, the Raman D:G ratio as a measure of disordered non-nanotube graphitic components was not a good predictor of adsorption from solution. Uptake of atrazine by MWNTs having a range of lengths and diameters was comparable and their Freundlich isotherms were statistically similar, and we found no impact of solution pH on the adsorption of either atrazine or trichloroethylene in the range of naturally occurring surface water (pH = 5.7-8.3). Experiments were performed using a suite of model aromatic compounds having a range of π-electron energy to investigate the role of π-π electron donor-acceptor interactions on organic compound uptake by SWNTs. For the compounds studied, hydrophobic interactions were the dominant mechanism in the uptake by both SWNTs and activated carbon. However, comparing the uptake of naphthalene and phenanthrene by activated carbon and SWNTs, size exclusion effects

  15. Adsorption uptake of synthetic organic chemicals by carbon nanotubes and activated carbons.

    PubMed

    Brooks, A J; Lim, Hyung-nam; Kilduff, James E

    2012-07-27

    Carbon nanotubes (CNTs) have shown great promise as high performance materials for adsorbing priority pollutants from water and wastewater. This study compared uptake of two contaminants of interest in drinking water treatment (atrazine and trichloroethylene) by nine different types of carbonaceous adsorbents: three different types of single walled carbon nanotubes (SWNTs), three different sized multi-walled nanotubes (MWNTs), two granular activated carbons (GACs) and a powdered activated carbon (PAC). On a mass basis, the activated carbons exhibited the highest uptake, followed by SWNTs and MWNTs. However, metallic impurities in SWNTs and multiple walls in MWNTs contribute to adsorbent mass but do not contribute commensurate adsorption sites. Therefore, when uptake was normalized by purity (carbon content) and surface area (instead of mass), the isotherms collapsed and much of the CNT data was comparable to the activated carbons, indicating that these two characteristics drive much of the observed differences between activated carbons and CNT materials. For the limited data set here, the Raman D:G ratio as a measure of disordered non-nanotube graphitic components was not a good predictor of adsorption from solution. Uptake of atrazine by MWNTs having a range of lengths and diameters was comparable and their Freundlich isotherms were statistically similar, and we found no impact of solution pH on the adsorption of either atrazine or trichloroethylene in the range of naturally occurring surface water (pH = 5.7-8.3). Experiments were performed using a suite of model aromatic compounds having a range of π-electron energy to investigate the role of π-π electron donor-acceptor interactions on organic compound uptake by SWNTs. For the compounds studied, hydrophobic interactions were the dominant mechanism in the uptake by both SWNTs and activated carbon. However, comparing the uptake of naphthalene and phenanthrene by activated carbon and SWNTs, size exclusion effects

  16. Lateral Flow of Carbon From U.S. Agricultural Lands: Carbon Uptake, Consumption, and Respiration

    NASA Astrophysics Data System (ADS)

    Sabesan, A.; West, T. O.; Roddy, A. B.; Marland, G.; Bhaduri, B. L.

    2005-12-01

    Net carbon exchange between biomass and the atmosphere can be estimated and modeled on a regional basis to understand the effects of land-use change on the carbon cycle and on net CO2 emissions to the atmosphere. However, within ecosystems that are managed to produce commodities for consumption (i.e., agriculture and forest lands), carbon can be transported laterally when crops or timber are harvested, in addition to being transported vertically between plants and the atmosphere. The spatial and temporal domain over which carbon uptake, transport, and release occur has implications for regional carbon studies. For example, carbon may be taken up by crops in one region, but released through human consumption in another region. Estimates of lateral transport and release of carbon may therefore contribute another dimension to bottom-up carbon modeling, and may also be used as input for comparison to top-down atmospheric modeling. Our research to date has focused on the uptake, consumption, and respiration of CO2 associated with agricultural crops and related food commodities. We estimate a net uptake of 495 Tg C on U.S. croplands in 2000. This uptake occurs primarily in the Midwestern U.S. Human respiration of CO2 contributed about 31 Tg C and livestock emitted about 77 Tg C as CO2 and CH4 in 2000. Estimates of CO2 from food wastes in municipal landfills and from human excrement in wastewater treatment plants are currently being developed. The spatial distribution of CO2 uptake and release are mapped, respectively, at the county level and at 1km resolution that is commensurate with Landscan USA population data.

  17. Synthesis of PbI(2) single-layered inorganic nanotubes encapsulated within carbon nanotubes.

    PubMed

    Cabana, Laura; Ballesteros, Belén; Batista, Eudar; Magén, César; Arenal, Raúl; Oró-Solé, Judith; Rurali, Riccardo; Tobias, Gerard

    2014-04-02

    The template assisted growth of single-layered inorganic nanotubes is reported. Single-crystalline lead iodide single-layered nanotubes have been prepared using the inner cavities of carbon nanotubes as hosting templates. The diameter of the resulting inorganic nanotubes is merely dependent on the diameter of the host. This facile method is highly versatile opening up new horizons in the preparation of single-layered nanostructures. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. Dissolved inorganic and organic nitrogen uptake in the coastal North Sea: A seasonal study

    NASA Astrophysics Data System (ADS)

    Moneta, Alessia; Veuger, Bart; van Rijswijk, Pieter; Meysman, Filip; Soetaert, Karline; Middelburg, Jack J.

    2014-06-01

    Nitrogen incorporation into total particulate suspended matter, hydrolysable amino acids and bacterial biomarker D-Alanine was assessed seasonally in the coastal North Sea using 15N-labeled ammonium, nitrate, nitrite and 15N- and 13C-labeled urea, glycine, leucine, phenylalanine, and two complex pools of dissolved organic matter (DOM) derived from algal and bacterial cultures (A-DOM, B-DOM). We investigated: 1) uptake rates for the various substrates and their contribution to total N uptake; 2) microbial preferences for the different N sources; 3) the coupling of C and N uptake from organic substrates; 4) the contribution of bacteria to the total microbial uptake of these substrates, and 5) the role of a complex pool of organic matter for plankton nutrition. Seasonality in the preferences for N substrates was observed, with A-DOM and B-DOM being preferred in autumn and winter whereas NH4+ was preferentially taken up in spring and summer. C and N uptake was coupled for all the organic substrates, except urea that was mainly used as a nitrogen source in summer and spring. Bacterial contribution to the uptake of A-DOM and B-DOM was, on an annual average, the lowest among the N-substrates. This suggests an important role for phytoplankton in the incorporation of complex organic matter and the importance of DOM for phytoplankton nutrition.

  19. Maximizing carbon uptake and performance gain in slag-containing concretes through early carbonation

    NASA Astrophysics Data System (ADS)

    Monkman, Sean

    Carbon dioxide (CO2) emissions have been identified as a major contributor to climate change. Current CO2 mitigation efforts focus on the removal, recovery and disposal of CO2 at point sources. Finding beneficial uses of as-captured or recovered CO2 is a critical challenge in greenhouse gas mitigation. This thesis investigates the possibility of the beneficial use of carbon dioxide in precast concrete production and the performance, both short-term and long-term, of the concretes so produced. The calcium compounds in cementitious materials react readily with carbon dioxide to convert CO2 to thermodynamically stable carbonates. The reaction accelerates strength development and makes the technology appropriate for early age curing. Paste, mortar and concrete samples were examined to quantify such aspects as the carbon dioxide uptake, strength development, and durability of carbonated concrete. It was found that the uptake by the cementitious binders was significant. Compared to their theoretical capacity, cement could reach a carbonation degree of over 25% when treated as pastes and about 20% when used as a part of concrete. The study compared carbonation-cured and hydrated Portland cement concrete and slag cement concretes in terms of their early strength, late strength, weathering carbonation shrinkage, freeze/thaw durability, water absorption, and pH. The carbonated concrete was generally comparable, or superior, to the hydrated concrete except for the case of a 50% GGBF slag blend which had a slower strength development due to reduced secondary cementitious reaction. A second method of binding carbon into concrete was considered by carbonating ladle slag fines and using them as a fine aggregate. The 28-day strength of concrete, either hydrated or carbonation-cured, made with the manufactured slag aggregate was comparable to that of a hydrated concrete made with conventional fine aggregate. Carbon dioxide uptake by concrete was nearly doubled if carbonation

  20. Inorganic Carbon Turnover caused by Digestion of Carbonate Sands and Metabolic Activity of Holothurians

    SciTech Connect

    Schneider, Kenneth; Silverman, Jacob; Kravitz, Benjamin S.; Rivlin, Tanya; Schneider-Mor, Aya; Barbosa, Sergio; Byrne, Maria; Caldeira, Ken

    2013-11-20

    Recent measurements have shown that holothurians (sea cucumbers) play an important role in the cycling of CaCO3 in tropical coral reef systems through ingestion and processing of carbonate sediment. In this study inorganic additional aspects of carbon turnover were determined in laboratory incubations of Holothuria atra, H. leucospilota and Stichopus herrmanni from One Tree Reef, Great Barrier Reef. The pH values of the gut lumen ranged from 6.1 to 6.7 in animals with empty digestive tracts as opposed to 7.0 to 7.6 when digestive tracts were filled with sediment. Empty gut volume estimates for H. atra and S. herrmanni were 36 ± 4 mL and 151 ± 14 mL, respectively. Based on these measurements it is estimated that these species process 19 ± 2kg and 80 ± 7kg CaCO3 sand yr-1 per individual, respectively. The annual dissolution rates of H. atra and S. herrmanni of 6.5±1.9g and 9.6±1.4g, respectively, suggest that 0.05±0.02% and 0.1±0.02% of the CaCO3 processed through their gut annually is dissolved. During the incubations the CaCO3 dissolution was 0.07±0.01%, 0.04±0.01% and 0.21±0.05% of the fecal casts for H. atra, H. leucospilota and S. herrmanni, respectively. The CaCO3 saturation state for both aragonite and calcite minerals during laboratory incubations decreased markedly due to a greater increase in dissolved inorganic carbon (DIC) relative to total alkalinity (AT) as a result of respiration by the animals. Our results support the hypothesis that deposit feeders such as sea cucumbers play an important ecological role in the coral reef CaCO3 cycle.

  1. Detecting carbon uptake and cellular allocation by individual algae in multispecies assemblages: Tracking carbon into single algal cells

    SciTech Connect

    Murdock, Justin N.

    2015-11-03

    Algal species vary in carbon (C) need and uptake rates. Understanding differences in C uptake and cellular allocation among species from natural communities will bring new insight into many ecosystem process questions including how species changes will alter energy availability and C sequestration in aquatic ecosystems. A major limitation of current methods that measure algal C incorporation is the inability to separate the response of individual species from mixed-species assemblages. I used Fourier-transform infrared microspectroscopy to qualitatively measure inorganic 13C isotope incorporation into individual algal cells in single species, two species, and natural phytoplankton assemblages. Lateral shifts in spectral peaks from 13C treatments were observed in all species. Comparison of peaks associated with carbohydrates, proteins, and lipids allowed for the detection of which individuals took in C, and which macromolecules the C was used to make. For example, shifts in Spirogyra spectral peaks showed substantial C incorporation in carbohydrates. Further, shifts in peaks at 1160 cm-1, 1108 cm-1, 1080 cm-1, 1048 cm-1, and 1030 cm-1 suggested C was being allocated into cellulose. The natural phytoplankton assemblage demonstrated how C could be tracked into co-occurring species. A diatom had large shifts in protein and carbohydrate peaks, while a green alga and euglenoid had only a few shifts in protein related peaks. Fourier-transform infrared microspectroscopy is an established, label free method for measuring the chemical composition of algal cells. However, adding a label such as 13C isotope can greatly expand the technique's capabilities by qualitatively tracking C movement between inorganic and organic states within single cells.

  2. Manure and fertilizer effects on organic and inorganic carbon losses and budget for an irrigated corn field

    USDA-ARS?s Scientific Manuscript database

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC and...

  3. [Exchange Fluxes and Coupling Relationship of Dissolved Inorganic Carbon and Dissolved Organic Carbon Across the Water-Sediment Interface in Lakes].

    PubMed

    Wang, Wei-ying; Lü, Chang-wei; He, Jiang; Zuo, Le; Yan, Dao-hao

    2015-10-01

    In this work, the exchange fluxes and coupling relationship of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) were investigated across the water-sediment interface in Lake Wuliangsuhai and Daihai by employing columnar simulation method. The results showed that the sediments in non-Phragmitescommunis area from Lake Wuliangsuhai functioned as the sources of DIC and DOC for overlying water, whereas the sediments from Lake Daihai as the sinks during the period of summer (90 days). In the experimental period, the average exchange rates of DIC and DOC were 71.07 mmol x (m2 x d)(-1) and 185.09 mmol x (m2 x d)(-1) in non-Phragmitescommunis area from Lake Wuliangsuhai, respectively; while in Lake Daihai, they were 155.75 mmol x (m2 x d)(-1) and -1478.08 mmol x (m2 x d)(-1) in shoal water zone, and -486.53 mmol x (m2 x d)(-1) and -1274.02 mmol x (m2 x d)(-1) in deep water zone, respectively. The coupling effects between DIC and DOC were governed by hydrobios, microbial uptake, abiotic and microbiological degradation in Lake Wuliangsuhai and in shoal water zone of Lake Daihai; while they were closely related to the coprecipitation process of CaCO3 and the fraction distribution of inorganic carbon in sediments in deep water zone of Lake Daihai. In summary, the sink or source functions of sediments could be considered as the results of synthetic action of lake types, offshore distance, geohydrochemistry and the fraction distribution of inorganic carbon.

  4. Assessment of methods for organic and inorganic carbon quantification in carbonate-containing Mediterranean soils

    NASA Astrophysics Data System (ADS)

    Apesteguia, Marcos; Virto, Iñigo; Plante, Alain

    2014-05-01

    Quantification of soil organic matter (SOM) stocks and fluxes continues to be an important endeavor in assessments of soil quality, and more broadly in assessments of ecosystem functioning. The quantification of SOM in alkaline, carbonate-containing soils, such as those found in Mediterranean areas, is complicated by the need to differentiate between organic carbon (OC) and inorganic carbon (IC), which continues to present methodological challenges. Acidification is frequently used to eliminate carbonates prior to soil OC quantification, but when performed in the liquid phase, can promote the dissolution and loss of a portion of the OC. Acid fumigation (AF) is increasingly preferred for carbonate removal, but its effectiveness is difficult to assess using conventional elemental and isotopic analyses. In addition, the potential effects of AF on SOM are not well characterized. The objective of the current study was to apply a multi-method approach to determine the efficacy of carbonate removal by AF and its effects on the residual SOM. We selected a set of 24 surface agricultural soils representing a large range of textures, SOM contents and presumed carbonate contents. For each soil, OC was determined using wet combustion (Walkley-Black) and IC was determined using the calcimeter method. Samples were then subjected to elemental (total C) and isotopic (δ13C) analyses by dry combustion using a Costech autoanalyzer coupled to a Thermo Finnigan Delta Plus isotope ratio mass spectrometer (IRMS) before and after AF. IC was equated to total C determined after fumigation, and OC was estimated as the different in total C before and after AF. Samples were also subjected to ramped oxidation using a Netzsch STA109 PC Luxx thermal analyzer coupled to a LICOR 820A infrared gas analyzer (IRGA). Quantification of OC was performed using evolved gas analysis of CO2 (CO2-EGA) in the exothermic region 200-500° C associated with organic matter combustion. IC was quantified by CO2-EGA

  5. Inorganic and organic nitrogen uptake by phytoplankton and heterotrophic bacteria in the stratified Mid-Atlantic Bight

    NASA Astrophysics Data System (ADS)

    Bradley, Paul B.; Sanderson, Marta P.; Frischer, Marc E.; Brofft, Jennifer; Booth, Melissa G.; Kerkhof, Lee J.; Bronk, Deborah A.

    2010-08-01

    Little is known about the relative importance of inorganic and organic nitrogen (N) sources in fueling production of phytoplankton versus heterotrophic bacteria on the continental shelf. This issue was addressed during two diel experiments conducted in the Mid-Atlantic Bight at the Long-term Ecosystem Observatory, LEO-15, off southern New Jersey. Uptake of 15N-labeled ammonium (NH 4+), nitrate (NO 3-), and nitrite (NO 2-), and dual-labeled ( 15N and 13C) urea and dissolved free amino acids was measured in water taken from the surface and bottom mixed layers approximately every 4 h over two 24 h periods in July 2002. Two methods were used to quantify 15N uptake rates: (1) traditional filtration into various phytoplankton and bacterial size classes, and (2) flow cytometric (FCM) sorting of autotrophic cells based on the presence of chlorophyll autofluorescence. Due to a strong pycnocline, the nutrient composition was quite distinct between the surface and bottom mixed layers. Dissolved organic N (DON) comprised >99% of the total dissolved N (TDN) pool in surface waters, whereas the bottom-water TDN pool was roughly divided between NH 4+, NO 3-, and DON. Urea was the dominant N form used by all fractions at the surface, and although phytoplankton >3 μm was responsible for most of the urea uptake, bacterial use was detected using stable isotopes and also suggested by ureC sequence analysis. The majority of ureC sequences recovered from the 0.2-0.8 μm fraction belonged to members of the Alphaproteobacteria (46%), whereas those of the 0.8-3.0 μm size class consisted primarily of Cyanobacteria (70%). In contrast to the surface, N uptake in the bottom layer was dominated by NH 4+. The bacterial fraction was responsible for 20-49% of the size-fractionated NH 4+ and NO 3- uptake in surface samples and 36-93% at the bottom. These results suggest that organic N, such as urea, is a viable source of N nutrition to phytoplankton forced to compete with heterotrophic bacteria

  6. Detecting anthropogenic carbon dioxide uptake and ocean acidification in the North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Bates, N. R.; Best, M. H. P.; Neely, K.; Garley, R.; Dickson, A. G.; Johnson, R. J.

    2012-01-01

    Fossil fuel use, cement manufacture and land-use changes are the primary sources of anthropogenic carbon dioxide (CO2) to the atmosphere, with the ocean absorbing 30 %. Ocean uptake and chemical equilibration of anthropogenic CO2with seawater results in a gradual reduction in seawater pH and saturation states (Ω) for calcium carbonate (CaCO3) minerals in a process termed ocean acidification. Assessing the present and future impact of ocean acidification on marine ecosystems requires detection of the multi-decadal rate of change across ocean basins and at ocean time-series sites. Here, we show the longest continuous record of ocean CO2 changes and ocean acidification in the North Atlantic subtropical gyre near Bermuda from 1983-2011. Dissolved inorganic carbon (DIC) and partial pressure of CO2 (pCO2) increased in surface seawater by ~40 μmol kg-1 and ~50 μatm (~20 %), respectively. Increasing Revelle factor (β) values imply that the capacity of North Atlantic surface waters to absorb CO2 has also diminished. As indicators of ocean acidification, seawater pH decreased by ~0.05 (0.0017 yr-1) and Ω values by ~7-8 %. Such data provide critically needed multi-decadal information for assessing the North Atlantic Ocean CO2sink and the pH changes that determine marine ecosystem responses to ocean acidification.

  7. Detecting anthropogenic carbon dioxide uptake and ocean acidification in the North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Bates, N. R.; Best, M. H. P.; Neely, K.; Garley, R.; Dickson, A. G.; Johnson, R. J.

    2012-07-01

    Fossil fuel use, cement manufacture and land-use changes are the primary sources of anthropogenic carbon dioxide (CO2) to the atmosphere, with the ocean absorbing approximately 30% (Sabine et al., 2004). Ocean uptake and chemical equilibration of anthropogenic CO2 with seawater results in a gradual reduction in seawater pH and saturation states (Ω) for calcium carbonate (CaCO3) minerals in a process termed ocean acidification. Assessing the present and future impact of ocean acidification on marine ecosystems requires detection of the multi-decadal rate of change across ocean basins and at ocean time-series sites. Here, we show the longest continuous record of ocean CO2 changes and ocean acidification in the North Atlantic subtropical gyre near Bermuda from 1983-2011. Dissolved inorganic carbon (DIC) and partial pressure of CO2 (pCO2) increased in surface seawater by ~40 μmol kg-1 and ~50 μatm (~20%), respectively. Increasing Revelle factor (β) values imply that the capacity of North Atlantic surface waters to absorb CO2 has also diminished. As indicators of ocean acidification, seawater pH decreased by ~0.05 (0.0017 yr-1) and ω values by ~7-8%. Such data provide critically needed multi-decadal information for assessing the North Atlantic Ocean CO2 sink and the pH changes that determine marine ecosystem responses to ocean acidification.

  8. Kinetics of inorganic carbon utilization by microalgal biofilm in a flat plate photoreactor.

    PubMed

    Lin, Yen H; Leu, Jyh Y; Lan, Chi R; Lin, P-Hsiu P; Chang, Fuh L

    2003-11-01

    A kinetic model was developed to describe inorganic carbon utilization by microalgae biofilm in a flat plate photoreactor. The model incorporates the fundamental mechanisms of diffusive mass transport and biological reaction of inorganic carbon by microalgal biofilm. An advanced numerical technique, the orthogonal collocation method and Gear's method, was employed to solve this kinetic model. The model solutions included the concentration profiles of inorganic carbon in the microalgal biofilm, the growths of suspended microalgae and microalgal biofilm, the effluent concentrations of inorganic carbon, and the flux of inorganic carbon from bulk liquid into biofilm. The batch kinetic test was independently conducted to determine biokinetic parameters used in the microalgal biofilm model simulation while initial thickness of microalgal biofilm were assumed. A laboratory-scale flat plate photoreactor with a high recycle flow rate was setup and conducted to verify the model. The volume of photoreactor is 60 l which yields a hydraulic retention time of 1.67 days. The model-generated inorganic carbon and the suspended microalgae concentration curves agreed well with those obtained in the laboratory-scale test. The fixation efficiencies of HCO(3)(-) and CO(2) are 98.5% and 90% at a steady-state condition, respectively. The concentration of suspended microalgal cell reached up to 12 mg/l at a maximum growth rate while the thickness of microalgal biofilm was estimated to be 104 microm at a steady-state condition. The approaches of experiments and model simulation presented in this study could be employed for the design of a flat plate photoreactor to treat CO(2) by microalgal biofilm in a fossil-fuel power plant.

  9. Independent colimitation for carbon dioxide and inorganic phosphorus.

    PubMed

    Spijkerman, Elly; de Castro, Francisco; Gaedke, Ursula

    2011-01-01

    Simultaneous limitation of plant growth by two or more nutrients is increasingly acknowledged as a common phenomenon in nature, but its cellular mechanisms are far from understood. We investigated the uptake kinetics of CO(2) and phosphorus of the algae Chlamydomonas acidophila in response to growth at limiting conditions of CO(2) and phosphorus. In addition, we fitted the data to four different Monod-type models: one assuming Liebigs Law of the minimum, one assuming that the affinity for the uptake of one nutrient is not influenced by the supply of the other (independent colimitation) and two where the uptake affinity for one nutrient depends on the supply of the other (dependent colimitation). In addition we asked whether the physiological response under colimitation differs from that under single nutrient limitation.We found no negative correlation between the affinities for uptake of the two nutrients, thereby rejecting a dependent colimitation. Kinetic data were supported by a better model fit assuming independent uptake of colimiting nutrients than when assuming Liebigs Law of the minimum or a dependent colimitation. Results show that cell nutrient homeostasis regulated nutrient acquisition which resulted in a trade-off in the maximum uptake rates of CO(2) and phosphorus, possibly driven by space limitation on the cell membrane for porters for the different nutrients. Hence, the response to colimitation deviated from that to a single nutrient limitation. In conclusion, responses to single nutrient limitation cannot be extrapolated to situations where multiple nutrients are limiting, which calls for colimitation experiments and models to properly predict growth responses to a changing natural environment. These deviations from single nutrient limitation response under colimiting conditions and independent colimitation may also hold for other nutrients in algae and in higher plants.

  10. Proxies for Metabolic Carbon (CM) and/or Dissolved Inorganic Carbon (DIC) Contributions to Mollusk Shell Carbonate

    NASA Astrophysics Data System (ADS)

    Higgins, P.

    2010-12-01

    The isotopic values of dissolved inorganic carbon (DIC) in surface waters reflect biogeochemical cycling of carbon, and therefore overall environmental conditions. Understanding past records of DIC can facilitate interpretations of ancient environmental conditions, and can be used to clarify effects of climate change in continental environments. The Hanna Formation, exposed in the Hanna Basin of south-central Wyoming, includes strata that document the Paleocene-Eocene Thermal Maximum (PETM). The majority of the Hanna Formation was deposited in fluvial environments, with the notable exception of two lacustrine intervals which bracket the Paleocene-Eocene transition. Abundant mollusk remains, including unionid bivalves, are present in the lacustrine units, and could potentially provide an intra-annual record of DIC of lake waters during the PETM. Although land snails assemble their shells mostly from respired CO2 (metabolic carbon, CM), aquatic mollusks use environmental CO2 (in the form of DIC) for shell construction, with some unknown contribution from CM. In the present study, an attempt was made to quantify the contribution of CM to the shells of unionid bivalves in the Hanna Formation. The carbon isotopic value of presumably inorganically precipitated limestone was used as a proxy for average annual DIC, though this interpretation is complicated due to the presence of microbially precipitated limestones (stromatolites) throughout the Hanna Formation. The carbon isotopic value of organic matter (mostly coal) as a proxy for average dissolved organic carbon (DOC), which is then used to approximate the carbon isotopic value of CM. Over all, carbon isotopic values from fossil shells increase over time in the Hanna Formation, presumably due to increased productivity in the lakes in response to the warming during the PETM. If limestones in the Hanna Formation were inorganically precipitated, as much as 30% of the carbonate in the shells of mollusks may be derived from

  11. Interannual stability of organic to inorganic carbon production on a coral atoll

    NASA Astrophysics Data System (ADS)

    Kwiatkowski, Lester; Albright, Rebecca; Hosfelt, Jessica; Nebuchina, Yana; Ninokawa, Aaron; Rivlin, Tanya; Sesboüé, Marine; Wolfe, Kennedy; Caldeira, Ken

    2016-04-01

    Ocean acidification has the potential to adversely affect marine calcifying organisms, with substantial ocean ecosystem impacts projected over the 21st century. Characterizing the in situ sensitivity of calcifying ecosystems to natural variability in carbonate chemistry may improve our understanding of the long-term impacts of ocean acidification. We explore the potential for intensive temporal sampling to isolate the influence of carbonate chemistry on community calcification rates of a coral reef and compare the ratio of organic to inorganic carbon production to previous studies at the same location. Even with intensive temporal sampling, community calcification displays only a weak dependence on carbonate chemistry variability. However, across three years of sampling, the ratio of organic to inorganic carbon production is highly consistent. Although further work is required to quantify the spatial variability associated with such ratios, this suggests that these measurements have the potential to indicate the response of coral reefs to ongoing disturbance, ocean acidification, and climate change.

  12. Stable carbon isotopes of dissolved inorganic carbon for a zonal transect across the subpolar North Atlantic Ocean in summer 2014

    NASA Astrophysics Data System (ADS)

    Humphreys, Matthew P.; Greatrix, Florence M.; Tynan, Eithne; Achterberg, Eric P.; Griffiths, Alex M.; Fry, Claudia H.; Garley, Rebecca; McDonald, Alison; Boyce, Adrian J.

    2016-06-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in samples collected during June-July 2014 in the subpolar North Atlantic. Sample collection was carried out on the RRS James Clark Ross cruise JR302, part of the "Radiatively Active Gases from the North Atlantic Region and Climate Change" (RAGNARoCC) research programme. The observed δ13CDIC values for cruise JR302 fall in a range from -0.07 to +1.95 ‰, relative to the Vienna Pee Dee Belemnite standard. From duplicate samples collected during the cruise, the 1σ precision for the 341 results is 0.08 ‰, which is similar to our previous work and other studies of this kind. We also performed a cross-over analysis using nearby historical δ13CDIC data, which indicated that there were no significant systematic offsets between our measurements and previously published results. We also included seawater reference material (RM) produced by A. G. Dickson (Scripps Institution of Oceanography, USA) in every batch of analysis, enabling us to improve upon the calibration and quality-control procedures from a previous study. The δ13CDIC is consistent within each RM batch, although its value is not certified. We report δ13CDIC values of 1.15 ± 0.03 ‰ and 1.27 ± 0.05 ‰ for batches 141 and 144 respectively. Our JR302 δ13CDIC data can be used - along with measurements of other biogeochemical variables - to constrain the processes that control DIC in the interior ocean, in particular the oceanic uptake of anthropogenic carbon dioxide and the biological carbon pump. Our δ13CDIC results are available from the British Oceanographic Data Centre - doi:10.5285/22235f1a-b7f3-687f-e053-6c86abc0c8a6.

  13. Microalgal bacterial floc properties are improved by a balanced inorganic/organic carbon ratio.

    PubMed

    Van Den Hende, Sofie; Vervaeren, Han; Saveyn, Hans; Maes, Guy; Boon, Nico

    2011-03-01

    Microalgal bacterial floc (MaB-floc) reactors have been suggested as a more sustainable secondary wastewater treatment. We investigated whether MaB-flocs could be used as tertiary treatment. Tertiary influent has a high inorganic/organic carbon ratio, depending on the efficiency of the secondary treatment. In this study, the effect of this inorganic/organic carbon ratio on the MaB-flocs performance was determined, using three sequencing batch photobioreactors. The MaB-flocs were fed with synthetic wastewater containing 84, 42, and 0 mg L(-1) C-KHCO(3) supplemented with 0, 42, 84 mg L(-1) C-sucrose, respectively, representing inorganic versus organic carbon. Bicarbonate significantly decreased the autotrophic index of the MaB-flocs and resulted in poorly settling flocs. Moreover, sole bicarbonate addition led to a high pH of 9.5 and significant lower nitrogen removal efficiencies. Sucrose without bicarbonate resulted in good settling MaB-flocs, high nitrogen removal efficiencies and neutral pH levels. Despite the lower chlorophyll a content of the biomass and the lower in situ oxygen concentration, 92-96% of the soluble COD-sucrose was removed. This study shows that the inorganic/organic carbon ratio of the wastewater is of major importance and that organic carbon is requisite to guarantee a good performance of the MaB-flocs for wastewater treatment.

  14. Radioisotope tracer studies of inorganic carbon and Ca in microbially derived CaCO3

    USGS Publications Warehouse

    Yates, Kimberly K.; Robbins, Lisa L.

    1999-01-01

    Microbial calcification significantly impacts the cycling and deposition of inorganic carbon. This research employs 45Ca and 14C techniques as radioisotopic tracers to examine the role of cellular cycling of Ca2+ and inorganic carbon in CaCO3 precipitation by the unicellular green alga Nannochloris atomus. Implications of the effects of these physiological aspects on CaCO3 precipitation and the effects of microbial calcification on CaCO3 δ13C ratios are discussed. Results from pulse/chase experiments indicate that intracellular Ca2+ is incorporated into extracellular CaCO3. Intracellular inorganic carbon leaks from cells within 10 to 12 s after injection of unlabelled NaHCO3, providing a source of inorganic carbon for extracellular CaCO3. Cellular expulsion of calcium plays a key role in increasing the CaCO3 saturation state at the site of calcification. The δ13C ratios of microbial carbonates may vary depending on the amount of photorespiratory CO2 incorporated.

  15. Isopycnal mixing by mesoscale eddies significantly impacts oceanic anthropogenic carbon uptake

    NASA Astrophysics Data System (ADS)

    Gnanadesikan, Anand; Pradal, Marie-Aude; Abernathey, Ryan

    2015-06-01

    Anthropogenic carbon dioxide uptake varies across Earth System Models for reasons that have remained obscure. When varied within a single model, the lateral eddy mixing coefficient ARedi produces a range of uptake similar to the modeled range. The highest uptake, resulting from a simulation with a constant ARedi of 2400 m2/s, simulates 15% more historical carbon uptake than a model with ARedi = 400 m2/s. A sudden doubling in carbon dioxide produces a 21% range in carbon uptake across the models. Two spatially dependent representations of ARedi produce uptake that lies in the middle of the range of constant values despite predicting very large values in the subtropical gyres. One-dimensional diffusive models of the type used for integrated assessments can be fit to the simulations, with ARedi accounting for a substantial fraction of the effective vertical diffusion. Such models, however, mask significant regional changes in stratification and biological carbon storage.

  16. Laboratory Exploration of Organic and Inorganic Carbon by Laser-induced Breakdown Spectroscopy (LIBS): Relevance for Planetary Astrobiology Missions

    NASA Astrophysics Data System (ADS)

    Blank, J. G.; Clegg, S. M.; Barefield, J. E.; McKay, C. P.; Wiens, R. C.

    2010-03-01

    We used LIBS and chemometric analysis to distinguish between organic and inorganic carbon in various samples (igneous rocks, carbonates, and kerogen-rich fertilizers), demonstrating the potential for ChemCam LIBS as an astrobiology tool for MSL.

  17. Linking calcification by exotic snails to stream inorganic carbon cycling.

    PubMed

    Hotchkiss, Erin R; Hall, Robert O

    2010-05-01

    Biotic calcification is rarely considered in freshwater C budgets, despite calculations suggesting that calcifying animals can alter inorganic C cycling. Most studies that have quantified biocalcification in aquatic ecosystems have not directly linked CO(2) fluxes from biocalcification with whole-ecosystem rates of inorganic C cycling. The freshwater snail, Melanoides tuberculata, has achieved a high abundance and 37.4 g biomass m(-2) after invading Kelly Warm Springs in Grand Teton National Park. This high biomass suggests that introduced populations of Melanoides may alter ecosystem processes. We measured Melanoides growth rates and biomass to calculate the production of biomass, shell mass, and CO(2). We compared Melanoides biomass and inorganic C production with ecosystem C pools and fluxes, as well as with published rates of CO(2) production by other calcifying organisms. Melanoides calcification in Kelly Warm Springs produced 12.1 mmol CO(2) m(-2) day(-1) during summer months. We measured high rates of gross primary productivity and respiration in Kelly Warm Springs (-378 and 533 mmol CO(2) m(-2) day(-1), respectively); CO(2) produced from biocalcification increased net CO(2) production in Kelly Warm Springs from 155 to 167 mmol CO(2) m(-2) day(-1). This rate of CO(2) production via biocalcification is within the published range of calcification by animals. But these CO(2) fluxes are small when compared to ecosystem C fluxes from stream metabolism. The influence of animals is relative to ecosystem processes, and should always be compared with ecosystem fluxes to quantify the importance of a specific animal in its environment.

  18. Improved cellular uptake of functionalized single-walled carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Antonelli, A.; Serafini, S.; Menotta, M.; Sfara, C.; Pierigé, F.; Giorgi, L.; Ambrosi, G.; Rossi, L.; Magnani, M.

    2010-10-01

    Single-walled carbon nanotubes (SWNTs) due to their unique structural and physicochemical properties, have been proposed as delivery systems for a variety of diagnostic and therapeutic agents. However, SWNTs have proven difficult to solubilize in aqueous solution, limiting their use in biological applications. In an attempt to improve SWNTs' solubility, biocompatibility, and to increase cell penetration we have thoroughly investigated the construction of carbon scaffolds coated with aliphatic carbon chains and phospholipids to obtain micelle-like structures. At first, oxidized SWNTs (2370 ± 30 nmol mg - 1 of SWNTs) were covalently coupled with an alcoholic chain (stearyl alcohol, C18H37OH; 816 nmol mg - 1 of SWNTs). Subsequently, SWNTs-COOC18H37 derivatives were coated with phosphatidylethanolamine (PE) or -serine (PS) phospholipids obtaining micelle-like structures. We found that cellular uptake of these constructs by phagocytic cells occurs via an endocytotic mechanism for constructs larger than 400 nm while occurs via diffusion through the cell membrane for constructs up to 400 nm. The material that enters the cell by phagocytosis is actively internalized by macrophages and localizes inside endocytotic vesicles. In contrast the material that enters the cells by diffusion is found in the cell cytosol. In conclusion, we have realized new biomimetic constructs based on alkylated SWNTs coated with phospholipids that are efficiently internalized by different cell types only if their size is lower than 400 nm. These constructs are not toxic to the cells and could now be explored as delivery systems for non-permeant cargoes.

  19. Uptake of dissolved organic carbon-complexed ⁶⁵Cu by the green mussel Perna viridis.

    PubMed

    Zhong, Huan; Evans, Douglas; Wang, Wen-Xiong

    2012-02-21

    Stable Cu isotope ((65)Cu) was complexed with various representative dissolved organic carbon (DOC) types, including coastal seawater DOC, fulvic acid (FA), cyanobacteria spirulina (SP) DOC, histidine (His), cysteine (Cys), and lipophilic diethyl dithiocarbamate (DDC) at different concentrations. The uptake of these dissolved Cu species by the coastal green mussel Perna viridis was quantified for the first time. Copper complexed with different DOC types were taken up in some measure by mussels, depending on the DOC types. However, complexation generally reduced Cu uptake as compared to that of inorganic Cu species, and DOC type-specific negative relationships were found between DOC levels and Cu uptake. Strong Cu binding sites (including His and organic sulfur functional groups) within DOC appeared to control the inhibitory effects of DOC on Cu uptake, possibly due to the competitive binding of Cu between the dissolved phase and biological membranes. Therefore, differences in strong Cu binding site levels may explain the differences in bioavailability of Cu complexed with different types of DOC. At the same time, the variations in Cu-DOC uptake may also be partly attributed to the absorption of Cu-DOC complexes, especially for the small Cu-DOC complexes (e.g., Cu-Cys, Cu-His, or Cu-DDC). Our study highlights the importance of considering the specificity of Cu-DOC complexes when assessing biological exposure to dissolved Cu in natural waters, especially during events, such as phytoplankton bloom periods, that could modify DOC composition and concentrations.

  20. Impacts of labile organic carbon concentration on organic and inorganic nitrogen utilization by a stream biofilm bacterial community.

    PubMed

    Ghosh, Suchismita; Leff, Laura G

    2013-12-01

    In aquatic ecosystems, carbon (C) availability strongly influences nitrogen (N) dynamics. One manifestation of this linkage is the importance in the dissolved organic matter (DOM) pool of dissolved organic nitrogen (DON), which can serve as both a C and an N source, yet our knowledge of how specific properties of DOM influence N dynamics are limited. To empirically examine the impact of labile DOM on the responses of bacteria to DON and dissolved inorganic nitrogen (DIN), bacterial abundance and community composition were examined in controlled laboratory microcosms subjected to various combinations of dissolved organic carbon (DOC), DON, and DIN treatments. Bacterial communities that had colonized glass beads incubated in a stream were treated with various glucose concentrations and combinations of inorganic and organic N (derived from algal exudate, bacterial protein, and humic matter). The results revealed a strong influence of C availability on bacterial utilization of DON and DIN, with preferential uptake of DON under low C concentrations. Bacterial DON uptake was affected by the concentration and by its chemical nature (labile versus recalcitrant). Labile organic N sources (algal exudate and bacterial protein) were utilized equally well as DIN as an N source, but this was not the case for the recalcitrant humic matter DON treatment. Clear differences in bacterial community composition among treatments were observed based on terminal restriction fragment length polymorphisms (T-RFLP) of 16S rRNA genes. C, DIN, and DON treatments likely drove changes in bacterial community composition that in turn affected the rates of DON and DIN utilization under various C concentrations.

  1. Impacts of Labile Organic Carbon Concentration on Organic and Inorganic Nitrogen Utilization by a Stream Biofilm Bacterial Community

    PubMed Central

    Leff, Laura G.

    2013-01-01

    In aquatic ecosystems, carbon (C) availability strongly influences nitrogen (N) dynamics. One manifestation of this linkage is the importance in the dissolved organic matter (DOM) pool of dissolved organic nitrogen (DON), which can serve as both a C and an N source, yet our knowledge of how specific properties of DOM influence N dynamics are limited. To empirically examine the impact of labile DOM on the responses of bacteria to DON and dissolved inorganic nitrogen (DIN), bacterial abundance and community composition were examined in controlled laboratory microcosms subjected to various combinations of dissolved organic carbon (DOC), DON, and DIN treatments. Bacterial communities that had colonized glass beads incubated in a stream were treated with various glucose concentrations and combinations of inorganic and organic N (derived from algal exudate, bacterial protein, and humic matter). The results revealed a strong influence of C availability on bacterial utilization of DON and DIN, with preferential uptake of DON under low C concentrations. Bacterial DON uptake was affected by the concentration and by its chemical nature (labile versus recalcitrant). Labile organic N sources (algal exudate and bacterial protein) were utilized equally well as DIN as an N source, but this was not the case for the recalcitrant humic matter DON treatment. Clear differences in bacterial community composition among treatments were observed based on terminal restriction fragment length polymorphisms (T-RFLP) of 16S rRNA genes. C, DIN, and DON treatments likely drove changes in bacterial community composition that in turn affected the rates of DON and DIN utilization under various C concentrations. PMID:24038688

  2. A green sorbent of esterified egg-shell membrane for highly selective uptake of arsenate and speciation of inorganic arsenic.

    PubMed

    Chen, Ming-Li; Gu, Cui-Bo; Yang, Ting; Sun, Yan; Wang, Jian-Hua

    2013-11-15

    Egg-shell membrane (ESM) is a promising adsorbent for heavy metal uptake. However, carboxylic groups on ESM surface barrier arsenic adsorption. Herein, ESM is modified by esterification and the methyl esterified egg-shell membrane (MESM) possesses positive charge within pH 1-9. As a novel green sorbent material, MESM exhibits 200-fold improvement on sorption capacity of arsenate with respect to bare ESM. It presents an ultra-high selectivity of 256:1 toward arsenate against arsenite. At pH 6, 100% sorption efficiency is achieved for 2 μg L(-1) As(V) by 10 mg MESM, while virtually no adsorption of As(III) is observed. This provides great potential for selective sorption of arsenate in the presence of arsenite. By loading 4.0 mL sample within 0.05-5.00 μg L(-1) As(V) followed by elution with 300 μL HCl (1.5 mol L(-1)), a detection limit of 15 ng L(-1) is obtained along with a RSD of 3.5% at 0.5 μg L(-1). Total inorganic arsenic is achieved by converting As(III) to As(V) and following the same sorption process. This procedure is applied for arsenate determination and inorganic arsenic speciation in Hijiki and water samples. The results are confirmed by graphite furnace atomic absorption spectrometry and spiking recovery. Copyright © 2013 Elsevier B.V. All rights reserved.

  3. Phase heterogeneity in carbonate production by marine fish influences their roles in sediment generation and the inorganic carbon cycle.

    PubMed

    Salter, Michael A; Harborne, Alastair R; Perry, Chris T; Wilson, Rod W

    2017-04-10

    Marine teleost fish are important carbonate producers in neritic and oceanic settings. However, the fates of the diverse carbonate phases (i.e., mineral and amorphous forms of CaCO3) they produce, and their roles in sediment production and marine inorganic carbon cycling, remain poorly understood. Here we quantify the carbonate phases produced by 22 Bahamian fish species and integrate these data with regional fish biomass data from The Bahamas to generate a novel platform-scale production model that resolves these phases. Overall carbonate phase proportions, ordered by decreasing phase stability, are: ~20% calcite, ~6% aragonite, ~60% high-Mg calcite, and ~14% amorphous carbonate. We predict that these phases undergo differing fates, with at least ~14% (amorphous carbonate) likely dissolving rapidly. Results further indicate that fisheries exploitation in The Bahamas has potentially reduced fish carbonate production by up to 58% in certain habitats, whilst also driving a deviation from natural phase proportions. These findings have evident implications for understanding sedimentary processes in shallow warm-water carbonate provinces. We further speculate that marked phase heterogeneity may be a hitherto unrecognised feature of fish carbonates across a wide range of neritic and oceanic settings, with potentially major implications for understanding their role in global marine inorganic carbon cycling.

  4. Carbon nanotube uptake and toxicity in the brain.

    PubMed

    Zhang, Leying; Alizadeh, Darya; Badie, Behnam

    2010-01-01

    The development of novel drug delivery systems is essential for the improvement of therapeutics for most human diseases. Currently used cellular delivery systems, such as viral vectors, liposomes, cationic lipids, and polymers, may have limited clinical efficacy because of safety issues, low gene transfer efficiency, or cytotoxicity. Carbon nanotubes (CNTs) have garnered much interest as possible biological vectors after the recent discovery of their capacity to penetrate cells. Inspite of the prominence of CNT studies in the nanotechnology literature, exploration of their application to central nervous system (CNS) therapeutics is at a very early stage. Before CNTs are used for treatment of brain and spinal cord disorders, however, several issues such as their CNS penetration and toxicity need to be addressed. Here, we discuss methods by which CNT uptake and toxicity can be assessed in animal models.

  5. Developing inorganic carbon-based radiocarbon chronologies for Holocene lake sediments in arid NW China

    NASA Astrophysics Data System (ADS)

    Zhang, Jiawu; Ma, Xueyang; Qiang, Mingrui; Huang, Xiaozhong; Li, Shuang; Guo, Xiaoyan; Henderson, Andrew C. G.; Holmes, Jonathan A.; Chen, Fahu

    2016-07-01

    Inorganic carbonates are often used to establish radiocarbon (14C) chronologies for lake sediments when terrestrial plant remains (TPR) are rare or when bulk organic matter is insufficient for dating, a problem that is common for many lakes in arid regions. However, the reservoir effect (RE), as well as old carbon contributed from the lakes catchment make it difficult to establish reliable chronologies. Here we present a systematic study of inorganic 14C ages of two lake-sediment sequences, one from a small-enclosed saline lake - Lake Gahai in Qaidam Basin, and the other from a large freshwater lake - Lake Bosten in Xinjiang. Modern dissolved inorganic carbon (DIC) of the lakes, paleo-lake sediments exposed in the catchment, and mollusk shells in core sediments from Lake Gahai were dated to assess the RE and the contribution of pre-aged carbon to the old ages in the cores. We propose a statistical regression to assess more than one RE for the 14C carbonate ages within our sedimentary sequences. Old radiocarbon ages contributed by detrital carbonates were assessed by comparing the ages of mollusk shells with those of carbonates at the same sediment depths. We established the RE of the authigenic component and assessed detrital old carbon contributions to our two sites, and this was used to correct the 14C ages. Based on this approach, we developed age models for both cores, and tested them using 210Pb ages in both cores and TPR-based 14C-ages recovered from Lake Bosten. We further tested our age models by comparing carbonate-based oxygen isotope (δ18O) records from both lakes to an independently-dated regional speleothem δ18O record. Our results suggest if sedimentary sequences are densely dated and the RE and the contribution of old carbon from detrital carbonates can be ascertained, robust chronological frameworks based on carbonate-based 14C determinations can be established.

  6. Cellular inorganic carbon fluxes in Trichodesmium: a combined approach using measurements and modelling

    PubMed Central

    Eichner, Meri; Thoms, Silke; Kranz, Sven A.; Rost, Björn

    2015-01-01

    To predict effects of climate change on phytoplankton, it is crucial to understand how their mechanisms for carbon acquisition respond to environmental conditions. Aiming to shed light on the responses of extra- and intracellular inorganic C (Ci) fluxes, the cyanobacterium Trichodesmium erythraeum IMS101 was grown with different nitrogen sources (N2 vs NO3 –) and pCO2 levels (380 vs 1400 µatm). Cellular Ci fluxes were assessed by combining membrane inlet mass spectrometry (MIMS), 13C fractionation measurements, and modelling. Aside from a significant decrease in Ci affinity at elevated pCO2 and changes in CO2 efflux with different N sources, extracellular Ci fluxes estimated by MIMS were largely unaffected by the treatments. 13C fractionation during biomass production, however, increased with pCO2, irrespective of the N source. Strong discrepancies were observed in CO2 leakage estimates obtained by MIMS and a 13C-based approach, which further increased under elevated pCO2. These offsets could be explained by applying a model that comprises extracellular CO2 and HCO3 – fluxes as well as internal Ci cycling around the carboxysome via the CO2 uptake facilitator NDH-14. Assuming unidirectional, kinetic fractionation between CO2 and HCO3 – in the cytosol or enzymatic fractionation by NDH-14, both significantly improved the comparability of leakage estimates. Our results highlight the importance of internal Ci cycling for 13C composition as well as cellular energy budgets of Trichodesmium, which ought to be considered in process studies on climate change effects. PMID:25429001

  7. Cellular inorganic carbon fluxes in Trichodesmium: a combined approach using measurements and modelling.

    PubMed

    Eichner, Meri; Thoms, Silke; Kranz, Sven A; Rost, Björn

    2015-02-01

    To predict effects of climate change on phytoplankton, it is crucial to understand how their mechanisms for carbon acquisition respond to environmental conditions. Aiming to shed light on the responses of extra- and intracellular inorganic C (Ci) fluxes, the cyanobacterium Trichodesmium erythraeum IMS101 was grown with different nitrogen sources (N2 vs NO3 (-)) and pCO2 levels (380 vs 1400 µatm). Cellular Ci fluxes were assessed by combining membrane inlet mass spectrometry (MIMS), (13)C fractionation measurements, and modelling. Aside from a significant decrease in Ci affinity at elevated pCO2 and changes in CO2 efflux with different N sources, extracellular Ci fluxes estimated by MIMS were largely unaffected by the treatments. (13)C fractionation during biomass production, however, increased with pCO2, irrespective of the N source. Strong discrepancies were observed in CO2 leakage estimates obtained by MIMS and a (13)C-based approach, which further increased under elevated pCO2. These offsets could be explained by applying a model that comprises extracellular CO2 and HCO3 (-) fluxes as well as internal Ci cycling around the carboxysome via the CO2 uptake facilitator NDH-14. Assuming unidirectional, kinetic fractionation between CO2 and HCO3 (-) in the cytosol or enzymatic fractionation by NDH-14, both significantly improved the comparability of leakage estimates. Our results highlight the importance of internal Ci cycling for (13)C composition as well as cellular energy budgets of Trichodesmium, which ought to be considered in process studies on climate change effects. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  8. Fractionation between inorganic and organic carbon during the Lomagundi (2.22 2.1 Ga) carbon isotope excursion

    NASA Astrophysics Data System (ADS)

    Bekker, A.; Holmden, C.; Beukes, N. J.; Kenig, F.; Eglinton, B.; Patterson, W. P.

    2008-07-01

    The Lomagundi (2.22-2.1 Ga) positive carbon isotope excursion in shallow-marine sedimentary carbonates has been associated with the rise in atmospheric oxygen, but subsequent studies have demonstrated that the carbon isotope excursion was preceded by the rise in atmospheric oxygen. The amount of oxygen released to the exosphere during the Lomagundi excursion is constrained by the average global fractionation between inorganic and organic carbon, which is poorly characterized. Because dissolved inorganic and organic carbon reservoirs were arguably larger in the Paleoproterozoic ocean, at a time of lower solar luminosity and lower ocean redox state, decoupling between these two variables might be expected. We determined carbon isotope values of carbonate and organic matter in carbonates and shales of the Silverton Formation, South Africa and in the correlative Sengoma Argillite Formation, near the border in Botswana. These units were deposited between 2.22 and 2.06 Ga along the margin of the Kaapvaal Craton in an open-marine deltaic setting and experienced lower greenschist facies metamorphism. The prodelta to offshore marine shales are overlain by a subtidal carbonate sequence. Carbonates exhibit elevated 13C values ranging from 8.3 to 11.2‰ vs. VPDB consistent with deposition during the Lomagundi positive excursion. The total organic carbon (TOC) contents range from 0.01 to 0.6% and δ13C values range from - 24.8 to - 13.9‰. Thus, the isotopic fractionation between organic and carbonate carbon was on average 30.3 ± 2.8‰ ( n = 32) in the shallow-marine environment. The underlying Sengoma shales have highly variable TOC contents (0.14 to 21.94%) and δ13C values (- 33.7 to - 20.8‰) with an average of - 27.0 ± 3.0‰ ( n = 50). Considering that the shales were also deposited during the Lomagundi excursion, and taking δ13C values of the overlying carbonates as representative of the δ13C value of dissolved inorganic carbon during shale deposition, a carbon

  9. THE EFFECT OF PH AND DISSOLVED INORGANIC CARBON ON THE PROPERTIES OF IRON COLLOIDAL SUSPENSIONS

    EPA Science Inventory

    Discolored water resulting from suspended iron particles is a relatively common drinking water consumer complaint. These particles result from the oxygenation of Fe(II), and this study shows that pH and dissolved inorganic carbon (DIC) have important effects on their properties....

  10. Fluxes of inorganic carbon from two forested catchments in the Appalachian mountains

    Treesearch

    Fred Worrall; Wayne T. Swank; Tim Burt

    2005-01-01

    This study uses long-term records of stream chemistry, discharge and air temperature from two neighbouring forested catchments in the southern Appalachians in order to calculate production of dissolved C02 and dissolved inorganic carbon (DIC). One of the pair of catchments was clear-felled during the period of the study. The study shows that: (1...

  11. Tuning Electrical Conductivity of Inorganic Minerals with Carbon Nanomaterials.

    PubMed

    Kovalchuk, Anton A; Tour, James M

    2015-12-02

    Conductive powders based on Barite or calcium carbonate with chemically converted graphene (CCG) were successfully synthesized by adsorption of graphene oxide (GO) or graphene oxide nanoribbons (GONRs) onto the mineral surfaces and subsequent chemical reduction with hydrazine. The efficient adsorption of GO or GONRs on the surface of Barite and calcium carbonate-based mineral particles results in graphene-wrapped hybrid materials that demonstrate a concentration dependent electrical conductivity that increases with the GO or GONR loading.

  12. Urea uptake and carbon fixation by marine pelagic bacteria and archaea during the Arctic summer and winter seasons.

    PubMed

    Connelly, Tara L; Baer, Steven E; Cooper, Joshua T; Bronk, Deborah A; Wawrik, Boris

    2014-10-01

    How Arctic climate change might translate into alterations of biogeochemical cycles of carbon (C) and nitrogen (N) with respect to inorganic and organic N utilization is not well understood. This study combined 15N uptake rate measurements for ammonium, nitrate, and urea with 15N- and 13C-based DNA stable-isotope probing (SIP). The objective was to identify active bacterial and archeal plankton and their role in N and C uptake during the Arctic summer and winter seasons. We hypothesized that bacteria and archaea would successfully compete for nitrate and urea during the Arctic winter but not during the summer, when phytoplankton dominate the uptake of these nitrogen sources. Samples were collected at a coastal station near Barrow, AK, during August and January. During both seasons, ammonium uptake rates were greater than those for nitrate or urea, and nitrate uptake rates remained lower than those for ammonium or urea. SIP experiments indicated a strong seasonal shift of bacterial and archaeal N utilization from ammonium during the summer to urea during the winter but did not support a similar seasonal pattern of nitrate utilization. Analysis of 16S rRNA gene sequences obtained from each SIP fraction implicated marine group I Crenarchaeota (MGIC) as well as Betaproteobacteria, Firmicutes, SAR11, and SAR324 in N uptake from urea during the winter. Similarly, 13C SIP data suggested dark carbon fixation for MGIC, as well as for several proteobacterial lineages and the Firmicutes. These data are consistent with urea-fueled nitrification by polar archaea and bacteria, which may be advantageous under dark conditions.

  13. Urea Uptake and Carbon Fixation by Marine Pelagic Bacteria and Archaea during the Arctic Summer and Winter Seasons

    PubMed Central

    Connelly, Tara L.; Baer, Steven E.; Cooper, Joshua T.; Bronk, Deborah A.

    2014-01-01

    How Arctic climate change might translate into alterations of biogeochemical cycles of carbon (C) and nitrogen (N) with respect to inorganic and organic N utilization is not well understood. This study combined 15N uptake rate measurements for ammonium, nitrate, and urea with 15N- and 13C-based DNA stable-isotope probing (SIP). The objective was to identify active bacterial and archeal plankton and their role in N and C uptake during the Arctic summer and winter seasons. We hypothesized that bacteria and archaea would successfully compete for nitrate and urea during the Arctic winter but not during the summer, when phytoplankton dominate the uptake of these nitrogen sources. Samples were collected at a coastal station near Barrow, AK, during August and January. During both seasons, ammonium uptake rates were greater than those for nitrate or urea, and nitrate uptake rates remained lower than those for ammonium or urea. SIP experiments indicated a strong seasonal shift of bacterial and archaeal N utilization from ammonium during the summer to urea during the winter but did not support a similar seasonal pattern of nitrate utilization. Analysis of 16S rRNA gene sequences obtained from each SIP fraction implicated marine group I Crenarchaeota (MGIC) as well as Betaproteobacteria, Firmicutes, SAR11, and SAR324 in N uptake from urea during the winter. Similarly, 13C SIP data suggested dark carbon fixation for MGIC, as well as for several proteobacterial lineages and the Firmicutes. These data are consistent with urea-fueled nitrification by polar archaea and bacteria, which may be advantageous under dark conditions. PMID:25063662

  14. The influence of dissolved organic carbon on bacterial phosphorus uptake and bacteria-phytoplankton dynamics in two Minnesota lakes

    USGS Publications Warehouse

    Stets, E.G.; Cotner, J.B.

    2008-01-01

    The balance of production in any ecosystem is dependent on the flow of limiting nutrients into either the autotrophic or heterotrophic components of the food web. To understand one of the important controls on the flow of inorganic nutrients between phytoplankton and bacterioplankton in lakes, we manipulated dissolved organic carbon (DOC) in two lakes of different trophic status. We hypothesized that labile DOC additions would increase bacterial phosphorus (P) uptake and decrease the response of phytoplankton to nutrient additions. Supplemental nutrients and carbon (C), nitrogen (N, 1.6 ??mol NH4Cl L-1 d-1), P (0.1 ??mol KH 2PO4 L-1 d-1), and DOC (glucose, 15 ??mol C L-1 d-1) were added twice daily to 8-liter experimental units. We tested the effect of added DOC on chlorophyll concentration, bacterial production, biomass, and P uptake using size-fractionated 33P-PO4 uptake. In the oligotrophic lake, DOC additions stimulated bacterial production and increased bacterial biomass-specific P uptake. Bacteria consumed added DOC, and chlorophyll concentrations were significantly lower in carboys receiving DOC additions. In the eutrophic lake, DOC additions had less of a stimulatory effect on bacterial production and biomass-specific P uptake. DOC accumulated over the time period, and there was little evidence for a DOC-induced decrease in phytoplankton biomass. Bacterial growth approached the calculated ??max and yet did not accumulate biomass, indicating significant biomass losses, which may have constrained bacterial DOC consumption. Excess bacterial DOC consumption in oligotrophic lakes may result in greater bacterial P affinity and enhanced nutrient uptake by the heterotrophic compartment of the food web. On the other hand, constraints on bacterial biomass accumulation in eutrophic lakes, from either viral lysis or bacterial grazing, can allow labile DOC to accumulate, thereby negating the effect of excess DOC on the planktonic food web. ?? 2008, by the American

  15. Nitric oxide generated by nitrate reductase increases nitrogen uptake capacity by inducing lateral root formation and inorganic nitrogen uptake under partial nitrate nutrition in rice

    PubMed Central

    Sun, Huwei; Li, Jiao; Song, Wenjing; Tao, Jinyuan; Huang, Shuangjie; Chen, Si; Hou, Mengmeng; Xu, Guohua; Zhang, Yali

    2015-01-01

    Increasing evidence shows that partial nitrate nutrition (PNN) can be attributed to improved plant growth and nitrogen-use efficiency (NUE) in rice. Nitric oxide (NO) is a signalling molecule involved in many physiological processes during plant development and nitrogen (N) assimilation. It remains unclear whether molecular NO improves NUE through PNN. Two rice cultivars (cvs Nanguang and Elio), with high and low NUE, respectively, were used in the analysis of NO production, nitrate reductase (NR) activity, lateral root (LR) density, and 15N uptake under PNN, with or without NO production donor and inhibitors. PNN increased NO accumulation in cv. Nanguang possibly through the NIA2-dependent NR pathway. PNN-mediated NO increases contributed to LR initiation, 15NH4 +/15NO3 – influx into the root, and levels of ammonium and nitrate transporters in cv. Nanguang but not cv. Elio. Further results revealed marked and specific induction of LR initiation and 15NH4 +/15NO3 – influx into the roots of plants supplied with NH4 ++sodium nitroprusside (SNP) relative to those supplied with NH4 + alone, and considerable inhibition upon the application of cPTIO or tungstate (NR inhibitor) in addition to PNN, which is in agreement with the change in NO fluorescence in the two rice cultivars. The findings suggest that NO generated by the NR pathway plays a pivotal role in improving the N acquisition capacity by increasing LR initiation and the inorganic N uptake rate, which may represent a strategy for rice plants to adapt to a fluctuating nitrate supply and increase NUE. PMID:25784715

  16. Nitric oxide generated by nitrate reductase increases nitrogen uptake capacity by inducing lateral root formation and inorganic nitrogen uptake under partial nitrate nutrition in rice.

    PubMed

    Sun, Huwei; Li, Jiao; Song, Wenjing; Tao, Jinyuan; Huang, Shuangjie; Chen, Si; Hou, Mengmeng; Xu, Guohua; Zhang, Yali

    2015-05-01

    Increasing evidence shows that partial nitrate nutrition (PNN) can be attributed to improved plant growth and nitrogen-use efficiency (NUE) in rice. Nitric oxide (NO) is a signalling molecule involved in many physiological processes during plant development and nitrogen (N) assimilation. It remains unclear whether molecular NO improves NUE through PNN. Two rice cultivars (cvs Nanguang and Elio), with high and low NUE, respectively, were used in the analysis of NO production, nitrate reductase (NR) activity, lateral root (LR) density, and (15)N uptake under PNN, with or without NO production donor and inhibitors. PNN increased NO accumulation in cv. Nanguang possibly through the NIA2-dependent NR pathway. PNN-mediated NO increases contributed to LR initiation, (15)NH₄(+)/(15)NO₃(-) influx into the root, and levels of ammonium and nitrate transporters in cv. Nanguang but not cv. Elio. Further results revealed marked and specific induction of LR initiation and (15)NH₄(+)/(15)NO₃(-) influx into the roots of plants supplied with NH₄(+)+sodium nitroprusside (SNP) relative to those supplied with NH₄(+) alone, and considerable inhibition upon the application of cPTIO or tungstate (NR inhibitor) in addition to PNN, which is in agreement with the change in NO fluorescence in the two rice cultivars. The findings suggest that NO generated by the NR pathway plays a pivotal role in improving the N acquisition capacity by increasing LR initiation and the inorganic N uptake rate, which may represent a strategy for rice plants to adapt to a fluctuating nitrate supply and increase NUE. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  17. Metabolic and transcriptomic phenotyping of inorganic carbon acclimation in the Cyanobacterium Synechococcus elongatus PCC 7942.

    PubMed

    Schwarz, Doreen; Nodop, Anke; Hüge, Jan; Purfürst, Stephanie; Forchhammer, Karl; Michel, Klaus-Peter; Bauwe, Hermann; Kopka, Joachim; Hagemann, Martin

    2011-04-01

    The amount of inorganic carbon is one of the main limiting environmental factors for photosynthetic organisms such as cyanobacteria. Using Synechococcus elongatus PCC 7942, we characterized metabolic and transcriptomic changes in cells that had been shifted from high to low CO(2) levels. Metabolic phenotyping indicated an activation of glycolysis, the oxidative pentose phosphate cycle, and glycolate metabolism at lowered CO(2) levels. The metabolic changes coincided with a general reprogramming of gene expression, which included not only increased transcription of inorganic carbon transporter genes but also genes for enzymes involved in glycolytic and photorespiratory metabolism. In contrast, the mRNA content for genes from nitrogen assimilatory pathways decreased. These observations indicated that cyanobacteria control the homeostasis of the carbon-nitrogen ratio. Therefore, results obtained from the wild type were compared with the MP2 mutant of Synechococcus 7942, which is defective for the carbon-nitrogen ratio-regulating PII protein. Metabolites and genes linked to nitrogen assimilation were differentially regulated, whereas the changes in metabolite concentrations and gene expression for processes related to central carbon metabolism were mostly similar in mutant and wild-type cells after shifts to low-CO(2) conditions. The PII signaling appears to down-regulate the nitrogen metabolism at lowered CO(2), whereas the specific shortage of inorganic carbon is recognized by different mechanisms.

  18. Metabolic and Transcriptomic Phenotyping of Inorganic Carbon Acclimation in the Cyanobacterium Synechococcus elongatus PCC 79421[W

    PubMed Central

    Schwarz, Doreen; Nodop, Anke; Hüge, Jan; Purfürst, Stephanie; Forchhammer, Karl; Michel, Klaus-Peter; Bauwe, Hermann; Kopka, Joachim; Hagemann, Martin

    2011-01-01

    The amount of inorganic carbon is one of the main limiting environmental factors for photosynthetic organisms such as cyanobacteria. Using Synechococcus elongatus PCC 7942, we characterized metabolic and transcriptomic changes in cells that had been shifted from high to low CO2 levels. Metabolic phenotyping indicated an activation of glycolysis, the oxidative pentose phosphate cycle, and glycolate metabolism at lowered CO2 levels. The metabolic changes coincided with a general reprogramming of gene expression, which included not only increased transcription of inorganic carbon transporter genes but also genes for enzymes involved in glycolytic and photorespiratory metabolism. In contrast, the mRNA content for genes from nitrogen assimilatory pathways decreased. These observations indicated that cyanobacteria control the homeostasis of the carbon-nitrogen ratio. Therefore, results obtained from the wild type were compared with the MP2 mutant of Synechococcus 7942, which is defective for the carbon-nitrogen ratio-regulating PII protein. Metabolites and genes linked to nitrogen assimilation were differentially regulated, whereas the changes in metabolite concentrations and gene expression for processes related to central carbon metabolism were mostly similar in mutant and wild-type cells after shifts to low-CO2 conditions. The PII signaling appears to down-regulate the nitrogen metabolism at lowered CO2, whereas the specific shortage of inorganic carbon is recognized by different mechanisms. PMID:21282404

  19. Highly selective and stable carbon dioxide uptake in polyindole-derived microporous carbon materials.

    PubMed

    Saleh, Muhammad; Tiwari, Jitendra N; Kemp, K Christain; Yousuf, Muhammad; Kim, Kwang S

    2013-05-21

    Adsorption with solid sorbents is considered to be one of the most promising methods for the capture of carbon dioxide (CO₂) from power plant flue gases. In this study, microporous carbon materials used for CO₂ capture were synthesized by the chemical activation of polyindole nanofibers (PIF) at temperatures from 500 to 800 °C using KOH, which resulted in nitrogen (N)-doped carbon materials. The N-doped carbon materials were found to be microporous with an optimal adsorption pore size for CO₂ of 0.6 nm and a maximum (Brunauer-Emmett-Teller) BET surface area of 1185 m(2) g(-1). The PIF activated at 600 °C (PIF6) has a surface area of 527 m(2) g(-1) and a maximum CO₂ storage capacity of 3.2 mmol g(-1) at 25 °C and 1 bar. This high CO₂ uptake is attributed to its highly microporous character and optimum N content. Additionally, PIF6 material displays a high CO₂ uptake at low pressure (1.81 mmol g(-1) at 0.2 bar and 25 °C), which is the best low pressure CO₂ uptake reported for carbon-based materials. The adsorption capacity of this material remained remarkably stable even after 10 cycles. The isosteric heat of adsorption was calculated to be in the range of 42.7-24.1 kJ mol(-1). Besides the excellent CO₂ uptake and stability, PIF6 also exhibits high selectivity values for CO₂ over N₂, CH₄, and H₂ of 58.9, 12.3, and 101.1 at 25 °C, respectively, and these values are significantly higher than reported values.

  20. Carbon availability for the fungus triggers nitrogen uptake and transport in the arbuscular mycorrhizal symbiosis

    USDA-ARS?s Scientific Manuscript database

    The arbuscular mycorrhizal (AM) symbiosis is characterized by a transfer of nutrients in exchange for carbon. We tested the effect of the carbon availability for the AM fungus Glomus intraradices on nitrogen (N) uptake and transport in the symbiosis. We followed the uptake and transport of 15N and ...

  1. Characterizing the metabolic trade-off in Nitrosomonas europaea in response to changes in inorganic carbon supply.

    PubMed

    Jiang, D; Khunjar, W O; Wett, B; Murthy, S N; Chandran, K

    2015-02-17

    The link between the nitrogen and one-carbon cycles forms the metabolic basis for energy and biomass synthesis in autotrophic nitrifying organisms, which in turn are crucial players in engineered nitrogen removal processes. To understand how autotrophic nitrifying organisms respond to inorganic carbon (IC) conditions that could be encountered in engineered partially nitrifying systems, we investigated the response of one of the most extensively studied model ammonia oxidizing bacteria, Nitrosomonas europaea (ATCC19718), to three IC availability conditions: excess gaseous and excess ionic IC supply (40× stoichiometric requirement), excess gaseous IC supply (4× stoichiometric requirement in gaseous form only), and limiting IC supply (0.25× stoichiometric requirement). We found that, when switching from excess gaseous and excess ionic IC supply to excess gaseous IC supply, N. europaea chemostat cultures demonstrated an acclimation period that was characterized by transient decreases in the ammonia removal efficiency and transient peaks in the specific oxygen uptake rate. Limiting IC supply led to permanent reactor failures (characterized by biomass washout and failure of ammonia removal) that were preceded by similar decreases in the ammonia removal efficiency and peaks in the specific oxygen uptake rate. Notably, both excess gaseous IC supply and limiting IC supply elicited a previously undocumented increase in nitric and nitrous oxide emissions. Further, gene expression patterns suggested that excess gaseous IC supply and limiting IC supply led to consistent up-regulation of ammonia respiration genes and carbon assimilation genes. Under these conditions, interrogation of the N. europaea proteome revealed increased levels of carbon fixation and transport proteins and decreased levels of ammonia oxidation proteins (active in energy synthesis pathways). Together, the results indicated that N. europaea mobilized enhanced IC scavenging pathways for biosynthesis and

  2. [Effect of inorganic carbon source on lipid production with autotrophic Chlorella vulgaris].

    PubMed

    Zheng, Hongli; Gao, Zhen; Zhang, Qi; Huang, He; Ji, Xiaojun; Sun, Honglei; Dou, Chang

    2011-03-01

    We studied the effects of three inorganic carbon sources, Na2CO3, NaHCO3 and CO2, and their initial concentrations on lipid production of Chlorella vulgaris. Chlorella vulgaris could utilize Na2CO3, NaHCO3 and CO2 to produce lipids. After 10-day cultivation with each of the three inorganic carbon sources, lipid yield of Chlorella vulgaris reached its peak with the concentration increase of the inorganic carbon source, but dropped again by further increase of the concentration. The pH value of the culture medium for Chlorella vulgaris increased after the cultivation on inorganic carbon source. The optimal concentration of both Na2CO3 and NaHCO3 was 40 mmol/L, and their corresponding biomass dry weight was 0.52 g/L and 0.67 g/L with their corresponding lipid yield 0.19 g/L and 0.22 g/L. When the concentration of CO2 was 6%, Chlorella vulgaris grew the fastest and its biomass dry weight was 2.42 g/L with the highest lipid yield of 0.72 g/L. When the concentration of CO2 was too low, the supply of inorganic carbon was insufficient and lipid yield was low. A too high concentration of CO2 caused a low pH and lipid accumulation was inhibited. Na2CO3 and NaHCO3 were more favorable for Chlorella vulgaris to accumulate unsaturated fatty acids than that of CO2.

  3. Interaction of carbon nanohorns with plants: Uptake and biological effects

    DOE PAGES

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; ...

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmedmore » by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.« less

  4. Interaction of carbon nanohorns with plants: Uptake and biological effects

    SciTech Connect

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; Puretzky, Alexander A.; Green, Micah J.; Khodakovskaya, Mariya V.

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmed by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.

  5. Parallel trends in organic and inorganic carbon isotopes across the Permian/Triassic boundary

    SciTech Connect

    Magaritz, M. ); Krishnamurthy, R.V. ); Holser, W.T. Cornell Univ., Ithaca, NY )

    1992-12-01

    Stable carbon isotope ratios in both inorganic and organic reservoirs have been widely applied to model environmental and sedimentological changes on a global scale. Most studies dealing with major extinction events have used the record of inorganic carbon. In this paper the authors report the relation between shifts in carbon-13 content of organic matter and coexisting carbonate fractions at a major extinction event, the Permian/Triassic boundary. They found that both [delta][sup 13]C[sub carb] and [delta][sup 13]C[sub org] of the surface ocean varied dramatically across the boundary, but the fractionation [Delta][sup 13]C between organic matter and carbonate remained constant. This result appreciably restricts the interpretation of changes in the carbon cycle during this critical interval. The new data are best explained by a combination of two mechanisms for variation in [delta][sup 13]C[sub carb]: (1) burial and erosion of organic carbon, with a long time constant; and (2) sequestration of organic carbon into shallow and deep oceanic reservoirs, with a shorter time constant. For application to their case, the first mechanism is limited by possible buildup of marine pCO[sub 2], which would increase the isotopic fractionation factor. The second mechanism is limited in application to short-term transient variations in [delta][sup 13]C. Modeling of the carbon cycle and its variations of [delta][sup 13]C must take both mechanisms into account.

  6. Apparent Disequilibrium of Inorganic and Organic Carbon Compounds in Serpentinizing Fluids

    NASA Astrophysics Data System (ADS)

    Robinson, K.; Shock, E.

    2014-12-01

    During serpentinization of ultramafic rocks, ferrous iron in silicates is oxidized to ferric minerals and H2O is reduced to H2. This process is accompanied by the reduction of inorganic carbon, as observed in experiments and natural systems. To test the extent to which stable and metastable equilibria are reached among aqueous organic compounds during serpentinization, we sampled water and dissolved gases from circumneutral surface pools and hyperalkaline seeps in the Samail ophiolite in the Sultanate of Oman and analyzed for various carbon constituents, including dissolved inorganic carbon, dissolved organic carbon, methane, carbon monoxide, formate, acetate, and other small organic acid anions. Measurements of temperature, pH, dissolved H2, O2, major cations, major anions, and major and trace elements were also made. The aqueous composition of the analyzed samples was speciated based on ionic equilibrium interactions in order to obtain activities for inorganic carbon species, reduced carbon species, H2, and O2. The redox disequilibria among carbon species was then assessed using data and parameters for the revised HKF equations of state. This analysis demonstrates that the carbon species in this system are out of equilibrium with respect to one another in ways that cannot be compensated by altering the abundance of the other constituents within analytical uncertainties. Specifically, there is too much formate and too little methane relative to stable and metastable equilibria. This result implies the following: 1) Methane and formate equilibrated in separate parts of the system, given that no reasonable temperature, pressure, or composition changes satisfy equilibrium with their measured abundances. 2) Methane production is kinetically inhibited, as seen in experiments. 3) Microbial methane oxidation altered the abundance of methane and formate; methane oxidation to formate or carbonate is calculated to be extremely thermodynamically favorable in these fluids.

  7. Mechanisms of inorganic carbon acquisition in two estuarine Rhodophyceans: Bostrychia scorpioides (Hudson) ex Kützing Montagne and Catenella caespitosa (Withering) L. M. Irvine.

    PubMed

    Ruiz-Nieto, Miriam; Fernández, José A; Niell, F Xavier; Carmona, Raquel

    2014-09-01

    Marine macroalgae possess a range of mechanisms to increase the availability of CO2 for fixation by ribulose-1,5-bisphosphate carboxylase/oxygenase. Of these, possession of a periplasmic or external carbonic anhydrase and the ability to use bicarbonate ions is widely distributed. The mechanisms of carbon acquisition were studied in two estuarine red macroalgae Bostrychia scorpioides and Catenella caespitosa using a range of techniques. pH-drift and CO2-depletion experiments at constant pH suggested that CO2 is the main source of inorganic carbon in both species. Inhibitors indicated that internal and external carbonic anhydrase were present in both species. Inhibitors also suggested that uptake of bicarbonate is unlikely to be present (P < 0.05).

  8. H(+)-dependent inorganic phosphate uptake in Trypanosoma brucei is influenced by myo-inositol transporter.

    PubMed

    Russo-Abrahão, Thais; Koeller, Carolina Macedo; Steinmann, Michael E; Silva-Rito, Stephanie; Marins-Lucena, Thaissa; Alves-Bezerra, Michele; Lima-Giarola, Naira Ligia; de-Paula, Iron Francisco; Gonzalez-Salgado, Amaia; Sigel, Erwin; Bütikofer, Peter; Gondim, Katia Calp; Heise, Norton; Meyer-Fernandes, José Roberto

    2017-04-01

    Trypanosoma brucei is an extracellular protozoan parasite that causes human African trypanosomiasis or "sleeping sickness". During the different phases of its life cycle, T. brucei depends on exogenous inorganic phosphate (Pi), but little is known about the transport of Pi in this organism. In the present study, we showed that the transport of (32)Pi across the plasma membrane follows Michaelis-Menten kinetics and is modulated by pH variation, with higher activity at acidic pH. Bloodstream forms presented lower Pi transport in comparison to procyclic forms, that displayed an apparent K0.5 = 0.093 ± 0.008 mM. Additionally, FCCP (H(+)-ionophore), valinomycin (K(+)-ionophore) and SCH28080 (H(+), K(+)-ATPase inhibitor) inhibited the Pi transport. Gene Tb11.02.3020, previously described to encode the parasite H(+):myo-inositol transporter (TbHMIT), was hypothesized to be potentially involved in the H(+):Pi cotransport because of its similarity with the Pho84 transporter described in S. cerevisiae and other trypanosomatids. Indeed, the RNAi mediated knockdown remarkably reduced TbHMIT gene expression, compromised cell growth and decreased Pi transport by half. In addition, Pi transport was inhibited when parasites were incubated in the presence of concentrations of myo-inositol that are above 300 μM. However, when expressed in Xenopus laevis oocytes, two-electrode voltage clamp experiments provided direct electrophysiological evidence that the protein encoded by TbHMIT is definitely a myo-inositol transporter that may be only marginally affected by the presence of Pi. These results confirmed the presence of a Pi carrier in T. brucei, similar to the H(+)-dependent inorganic phosphate system described in S. cerevisiae and other trypanosomatids. This transport system contributes to the acquisition of Pi and may be involved in the growth and survival of procyclic forms. In summary, this work presents the first description of a Pi transport system in T. brucei.

  9. Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata

    PubMed Central

    Ponsard, Julie; Cambon-Bonavita, Marie-Anne; Zbinden, Magali; Lepoint, Gilles; Joassin, André; Corbari, Laure; Shillito, Bruce; Durand, Lucile; Cueff-Gauchard, Valérie; Compère, Philippe

    2013-01-01

    The shrimp Rimicaris exoculata dominates several hydrothermal vent ecosystems of the Mid-Atlantic Ridge and is thought to be a primary consumer harbouring a chemoautotrophic bacterial community in its gill chamber. The aim of the present study was to test current hypotheses concerning the epibiont's chemoautotrophy, and the mutualistic character of this association. In-vivo experiments were carried out in a pressurised aquarium with isotope-labelled inorganic carbon (NaH13CO3 and NaH14CO3) in the presence of two different electron donors (Na2S2O3 and Fe2+) and with radiolabelled organic compounds (14C-acetate and 3H-lysine) chosen as potential bacterial substrates and/or metabolic by-products in experiments mimicking transfer of small biomolecules from epibionts to host. The bacterial epibionts were found to assimilate inorganic carbon by chemoautotrophy, but many of them (thick filaments of epsilonproteobacteria) appeared versatile and able to switch between electron donors, including organic compounds (heterotrophic acetate and lysine uptake). At least some of them (thin filamentous gammaproteobacteria) also seem capable of internal energy storage that could supply chemosynthetic metabolism for hours under conditions of electron donor deprivation. As direct nutritional transfer from bacteria to host was detected, the association appears as true mutualism. Import of soluble bacterial products occurs by permeation across the gill chamber integument, rather than via the digestive tract. This first demonstration of such capabilities in a decapod crustacean supports the previously discarded hypothesis of transtegumental absorption of dissolved organic matter or carbon as a common nutritional pathway. PMID:22914596

  10. Inorganic carbon and emission of ammonia from manure

    USDA-ARS?s Scientific Manuscript database

    Animal agriculture, and manure in particular, is a major source of ammonia emissions, and numerous models have been developed for predicting ammonia emission from manure. However, even the most comprehensive models are often inaccurate. Ammonia emission is complicated by volatilization of carbon dio...

  11. Effect of inorganic additives on the growth of silica-carbonate biomorphs

    NASA Astrophysics Data System (ADS)

    Nakouzi, Elias; Rendina, Ryan; Palui, Goutam; Steinbock, Oliver

    2016-10-01

    Silica-barium carbonate biomorphs are complex precipitate microstructures that form by purely inorganic processes. They display life-like morphologies with smoothly curved surfaces that are not restricted to crystallographic symmetries. We investigate the morphogenetic influence of inorganic dopants that compete with the barium carbonate precipitation. Trace deposition of alkaline earth or transition metal additives causes significant changes to the crystal morphologies. In the case of Pb2+ and Ag+ ions, biomorph growth is disrupted by the formation of competing precipitates. Similarly, the addition of Ca2+, Mg2+, and Zn2+ induces the rapid crystallization of witherite or amorphous silica-carbonate aggregates at enhanced growth rates. By comparison, the addition of strontium ions results in the assembly of classic biomorphs such as cardioid sheets and helices. The procedures reported here exemplify the use of co-depositing agents to influence the compositional and crystallographic properties in a manner similar to magnesium-doped biogenic calcites.

  12. Nocturnal soil CO2 uptake and its relationship to subsurface soil and ecosystem carbon fluxes in a Chihuahuan Desert shrubland

    NASA Astrophysics Data System (ADS)

    Hamerlynck, Erik P.; Scott, Russell L.; Sánchez-Cañete, Enrique P.; Barron-Gafford, Greg A.

    2013-12-01

    their prevalence, little attention has been given to quantifying arid land soil and ecosystem carbon fluxes over prolonged, annually occurring dry periods. We measured soil [CO2] profiles and fluxes (Fs) along with volumetric soil moisture and temperature in bare interplant canopy soils and in soils under plant canopies over a three-month hot and dry period in a Chihuahuan Desert shrubland. Nocturnal Fs was frequently negative (from the atmosphere into the soil), a form of inorganic carbon exchange infrequently observed in other deserts. Negative Fs depended on air-soil temperature gradients and were more frequent and stronger in intercanopy soils. Daily integrated ecosystem-level Fs was always positive despite lower daily Fs in intercanopy soils due to nocturnal uptake and more limited positive response to isolated rains. Subsurface [CO2] profiles associated with negative Fs indicated that sustained carbonate dissolution lowered shallow-soil [CO2] below atmospheric levels. In the morning, positive surface Fs started earlier and increased faster than shallow-soil Fs, which was bidirectional, with upward flux toward the surface and downward flux into deeper soils. These dynamics are consistent with carbonate precipitation in conjunction with convection-assisted CO2 outgassing from warming air and soil temperatures and produced a pronounced diurnal Fs temperature hysteresis. We concluded that abiotic nocturnal soil CO2 uptake, through a small carbon sink, modulates dry season ecosystem-level carbon dynamics. Moreover, these abiotic carbon dynamics may be affected by future higher atmospheric carbon dioxide levels and predictions of more prolonged and regular hot and dry periods.

  13. Microbial uptake and regeneration of inorganic nitrogen off the coastal Namibian upwelling system

    NASA Astrophysics Data System (ADS)

    Benavides, Mar; Santana-Falcón, Yeray; Wasmund, Norbert; Arístegui, Javier

    2014-11-01

    We used 15N-labeled substrates to measure microbial nitrate (NO3-) and ammonium (NH4+) uptake, regeneration and associated dissolved organic nitrogen (DON) release in a coastal upwelling system off Namibia (Benguela Current) in the austral winter of 2011 with the aim of quantifying rates of new production (Pnew) and regenerated production (Preg). These measurements were made during four consecutive coastal-offshore transects. The water parcels sampled at the different stations over the transect were classified into three groups according to the time passed from the first contact of the water with the surface during coastal upwelling ('pseudo-age'). The average Pnew was high in freshly upwelled waters with a pseudo-age < 13 d (17.8 mmol N m- 2 h- 1), and decreased abruptly towards older waters (3.9 and 2.3 mmol N m- 2 h- 1 in waters with a pseudo-age of 13 to 55 d, and > 55 d, respectively). Preg rates were similar in < 13 d and 13-55 d waters (10.9 and 11.1 mmol N m- 2 h- 1, respectively), and decreased to 6.24 mmol N m- 2 h- 1 in waters with a pseudo-age > 55 d. Measuring nitrogen regeneration and DON release fluxes allowed us to correct Pnew and Preg rates. NO3- regeneration rates were low (< 0.5 mmol N m- 2 h- 1), while NH4+ regeneration rates were in the range of NH4+ uptake rates (~ 2 to 5 mmol N m- 2 h- 1), thus influencing significantly Preg rates. Parallel studies presented in this volume indicate a relatively high abundance of dinoflagellates and mixotrophic microflagellates, which may be partly responsible for the high Preg rates observed. Our results suggest that nitrogen regeneration plays an important role in sustaining primary production in this upwelling system.

  14. Does canopy nitrogen uptake enhance carbon sequestration by trees?

    PubMed

    Nair, Richard K F; Perks, Micheal P; Weatherall, Andrew; Baggs, Elizabeth M; Mencuccini, Maurizio

    2016-02-01

    Temperate forest (15) N isotope trace experiments find nitrogen (N) addition-driven carbon (C) uptake is modest as little additional N is acquired by trees; however, several correlations of ambient N deposition against forest productivity imply a greater effect of atmospheric nitrogen deposition than these studies. We asked whether N deposition experiments adequately represent all processes found in ambient conditions. In particular, experiments typically apply (15) N to directly to forest floors, assuming uptake of nitrogen intercepted by canopies (CNU) is minimal. Additionally, conventional (15) N additions typically trace mineral (15) N additions rather than litter N recycling and may increase total N inputs above ambient levels. To test the importance of CNU and recycled N to tree nutrition, we conducted a mesocosm experiment, applying 54 g N/(15) N ha(-1)  yr(-1) to Sitka spruce saplings. We compared tree and soil (15) N recovery among treatments where enrichment was due to either (1) a (15) N-enriched litter layer, or mineral (15) N additions to (2) the soil or (3) the canopy. We found that 60% of (15) N applied to the canopy was recovered above ground (in needles, stem and branches) while only 21% of (15) N applied to the soil was found in these pools. (15) N recovery from litter was low and highly variable. (15) N partitioning among biomass pools and age classes also differed among treatments, with twice as much (15) N found in woody biomass when deposited on the canopy than soil. Stoichiometrically calculated N effect on C uptake from (15) N applied to the soil, scaled to real-world conditions, was 43 kg C kg N(-1) , similar to manipulation studies. The effect from the canopy treatment was 114 kg C kg N(-1) . Canopy treatments may be critical to accurately represent N deposition in the field and may address the discrepancy between manipulative and correlative studies. © 2015 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  15. Understanding on Soil Inorganic Carbon Transformation in North China

    NASA Astrophysics Data System (ADS)

    Li, Guitong; Yang, Lifang; Zhang, Chenglei; Zhang, Hongjie

    2015-04-01

    Soil total carbon balance in long-term fertilization field experiments in North China Plain. Four long-term fertilization experiments (20-30 years) were investigated on SOC in 40 cm, calcium carbonate and active carbonate (AC) in 180 or 100 cm soil profile, δ13C values of SOC and δ13C and δ18O values of carbonate in soil profile, particle distribution of SOC and SIC in main soil layers, and ratios of pedogenic carbonate (PC) in SIC and C3-SOC in SOC. The most important conclusion is that fertilization of more than 20 years can produce detectable impact on pool size, profile distribution, ratio of active component and PC of SIC, which make it clear that SIC pool must be considered in the proper evaluation of the response of soil carbon balance to human activities in arid and semi-arid region. Land use impact on soil total carbon pool in Inner Mongolia. With the data of the second survey of soils in Inner Mongolia and the 58 soil profile data from Wu-lan-cha-bu-meng and Xi-lin-hao-te, combining with the 13C and 18O techniques, SIC density and stock in Inner Mongolia is estimated. The main conclusion is that soils in inner Mongolia have the same level of SOC and SIC, with the density in 100cm pedons of 8.97 kg•m-2 and 8.61 kg•m-2, respectively. Meanwhile, the significantly positive relationship between SOC and SIC in A layer indicates co-sequestration of SOC and SIC exist. Evaluation of the methods for measuring CA enzyme activity in soil. In laboratory, method in literature to measure CA activity in soil sample was repeated, and found it was not valid indeed. The failure could not attribute to the disturbance of common ions like NO3-, SO42-, Ca2+, and Mg2+. The adsorption of CA to soil material was testified as the main reason for that failure. A series of extractants were tested but no one can extract the adsorbed CA and be used in measuring CA activity in soil sample. Carbonate transformation in field with straw returned and biochar added. In 2009, a field

  16. Diversity of freshwater Epsilonproteobacteria and dark inorganic carbon fixation in the sulphidic redoxcline of a meromictic karstic lake.

    PubMed

    Noguerola, Imma; Picazo, Antonio; Llirós, Marc; Camacho, Antonio; Borrego, Carles M

    2015-07-01

    Sulfidic redoxclines are a suitable niche for the growth and activity of different chemo- and photolithotrophic sulphide-oxidizing microbial groups such as the Epsilonproteobacteria and the green sulfur bacteria (GSB). We have investigated the diversity, abundance and contribution to inorganic carbon uptake of Epsilonproteobacteria in a meromictic basin of Lake Banyoles. CARD-FISH counts revealed that Epsilonproteobacteria were prevalent at the redoxcline in winter (maximum abundance of 2 × 10(6) cells mL(-1), ≈60% of total cells) but they were nearly absent in summer, when GSB bloomed. This seasonal trend was supported by 16S rRNA gene pyrotag datasets, which revealed that the epsilonproteobacterial community was mainly composed of a member of the genus Arcobacter. In situ incubations using NaH(14)CO3 and MAR-CARD-FISH observations showed that this population assimilated CO2 in the dark, likely being mainly responsible for the autotrophic activity at the redoxcline in winter. Clone libraries targeting the aclB gene provided additional evidence of the potential capacity of these epsilonproteobacteria to fix carbon via rTCA cycle. Our data reinforce the key role of Epsilonproteobacteria in linking carbon and sulphur cycles, extend their influence to freshwater karstic lakes and raise questions about the actual contribution of chemolithotrophy at their redoxcline and euxinic water compartments.

  17. Factors Affecting the Clumped Isotope Signature of Dissolved Inorganic Carbon and Carbonate Minerals

    NASA Astrophysics Data System (ADS)

    Hill, P. S.; Tripati, A. K.; Schauble, E. A.

    2011-12-01

    18O/16O ratios[a] and 13C-18O bond ordering[b] in many natural and synthetic carbonate minerals may reflect the extent of isotopic equilibration of dissolved inorganic carbon (DIC) species, rather than the crystalline equilibrium. In the simplest case where transport and surface-reaction steps do not impart their own fractionations, the clumped isotope signature (Δ47: the enrichment in per mil of 13C18O16O above the amount expected for a random distribution of isotopes among all CO2 isotopologues) of a carbonate mineral precipitating from solution would preserve the temperature of DIC equilibration at the time of precipitation. We examine the consequences of (1) the time scale of DIC equilibration and (2) precipitation rate on Δ47 values of carbonate minerals, using electronic structure models of molecular clusters that approximate aqueous and crystalline chemical environments. Our use of cluster models for both the aqueous and the mineral phases of the clumped isotope system has the advantage of enabling us to compare aqueous and mineral systems with the same electronic structure methods, partially canceling systematic model errors. Fluid cluster models containing 21-32 water molecules are generated from periodic-boundary-condition molecular dynamics simulations. Mineral clusters are derived from measured crystal structures, with boundaries terminated by link atoms so as to retain Pauling bond strengths with severed distal lattice bonds[c]. Different combinations of density functional theory (DFT) methods and basis sets are compared. These studies, combined with concurrent controlled precipitation experiments, will add to our understanding of the extent of disequilibrium effects on clumping while providing a framework to include previous studies (such as the work of Guo et al. on the kinetic effects of CO2 dehydration and dehydroxyation and acid digestion[e]). [a] Zeebe, R.E. (2007) G3, 8, Q09002,; Zeebe, R.E. (1999) GCA 63, 2001-2007 [b] Tripati, A.K. et al

  18. Carbon isotopes of dissolved inorganic carbon reflect utilization of different carbon sources by microbial communities in two limestone aquifer assemblages

    NASA Astrophysics Data System (ADS)

    Nowak, Martin E.; Schwab, Valérie F.; Lazar, Cassandre S.; Behrendt, Thomas; Kohlhepp, Bernd; Totsche, Kai Uwe; Küsel, Kirsten; Trumbore, Susan E.

    2017-08-01

    Isotopes of dissolved inorganic carbon (DIC) are used to indicate both transit times and biogeochemical evolution of groundwaters. These signals can be complicated in carbonate aquifers, as both abiotic (i.e., carbonate equilibria) and biotic factors influence the δ13C and 14C of DIC. We applied a novel graphical method for tracking changes in the δ13C and 14C of DIC in two distinct aquifer complexes identified in the Hainich Critical Zone Exploratory (CZE), a platform to study how water transport links surface and shallow groundwaters in limestone and marlstone rocks in central Germany. For more quantitative estimates of contributions of different biotic and abiotic carbon sources to the DIC pool, we used the NETPATH geochemical modeling program, which accounts for changes in dissolved ions in addition to C isotopes. Although water residence times in the Hainich CZE aquifers based on hydrogeology are relatively short (years or less), DIC isotopes in the shallow, mostly anoxic, aquifer assemblage (HTU) were depleted in 14C compared to a deeper, oxic, aquifer complex (HTL). Carbon isotopes and chemical changes in the deeper HTL wells could be explained by interaction of recharge waters equilibrated with post-bomb 14C sources with carbonates. However, oxygen depletion and δ13C and 14C values of DIC below those expected from the processes of carbonate equilibrium alone indicate considerably different biogeochemical evolution of waters in the upper aquifer assemblage (HTU wells). Changes in 14C and 13C in the upper aquifer complexes result from a number of biotic and abiotic processes, including oxidation of 14C-depleted OM derived from recycled microbial carbon and sedimentary organic matter as well as water-rock interactions. The microbial pathways inferred from DIC isotope shifts and changes in water chemistry in the HTU wells were supported by comparison with in situ microbial community structure based on 16S rRNA analyses. Our findings demonstrate the large

  19. New insights into iron acquisition by cyanobacteria: an essential role for ExbB-ExbD complex in inorganic iron uptake

    PubMed Central

    Jiang, Hai-Bo; Lou, Wen-Jing; Ke, Wen-Ting; Song, Wei-Yu; Price, Neil M; Qiu, Bao-Sheng

    2015-01-01

    Cyanobacteria are globally important primary producers that have an exceptionally large iron requirement for photosynthesis. In many aquatic ecosystems, the levels of dissolved iron are so low and some of the chemical species so unreactive that growth of cyanobacteria is impaired. Pathways of iron uptake through cyanobacterial membranes are now being elucidated, but the molecular details are still largely unknown. Here we report that the non-siderophore-producing cyanobacterium Synechocystis sp. PCC 6803 contains three exbB-exbD gene clusters that are obligatorily required for growth and are involved in iron acquisition. The three exbB-exbDs are redundant, but single and double mutants have reduced rates of iron uptake compared with wild-type cells, and the triple mutant appeared to be lethal. Short-term measurements in chemically well-defined medium show that iron uptake by Synechocystis depends on inorganic iron (Fe′) concentration and ExbB-ExbD complexes are essentially required for the Fe′ transport process. Although transport of iron bound to a model siderophore, ferrioxamine B, is also reduced in the exbB-exbD mutants, the rate of uptake at similar total [Fe] is about 800-fold slower than Fe′, suggesting that hydroxamate siderophore iron uptake may be less ecologically relevant than free iron. These results provide the first evidence that ExbB-ExbD is involved in inorganic iron uptake and is an essential part of the iron acquisition pathway in cyanobacteria. The involvement of an ExbB-ExbD system for inorganic iron uptake may allow cyanobacteria to more tightly maintain iron homeostasis, particularly in variable environments where iron concentrations range from limiting to sufficient. PMID:25012898

  20. Uncertainty in projections of Southern Ocean carbon uptake and acidification

    NASA Astrophysics Data System (ADS)

    Lovenduski, Nicole; Hauri, Claudine

    2017-04-01

    We investigate projections of carbon uptake and the associated acidification of the Southern Ocean over 2006-2080 using output from two ensembles of the Community Earth System Model run under business as usual (RCP8.5) and mitigation (RCP4.5) emission scenarios. On basin-wide and regional scales we observe a rapid onset of aragonite undersaturation in surface waters by mid-century that may be detrimental to calcareous organisms. An analysis of variance reveals that the speed of transition from supersaturation to undersaturation is driven almost entirely by emission scenario, as internal variability in saturation depth across ensemble members is small. Regional differences are observed in the timing and magnitude of aragonite saturation state changes. In the Patagonian Shelf region, undersaturation of the top 200m of the water column is observed by 2080 regardless of emission scenario. Whereas, in the Weddell Sea, saturation state is significantly different between the two emission scenarios by 2080, and undersaturation of the surface waters is "avoidable" if we follow RCP4.5, rather than RCP8.5.

  1. Multiwalled carbon nanotubes in alfalfa and wheat: toxicology and uptake.

    PubMed

    Miralles, Pola; Johnson, Errin; Church, Tamara L; Harris, Andrew T

    2012-12-07

    Data on the bioavailability and toxicity of carbon nanotubes (CNTs) in the environment, and, in particular, on their interactions with vascular plants, are limited. We investigated the effects of industrial-grade multiwalled CNTs (75 wt% CNTs) and their impurities on alfalfa and wheat. Phytotoxicity assays were performed during both seed germination and seedling growth. The germinations of both species were tolerant of up to 2560 mg l(-1) CNTs, and root elongation was enhanced in alfalfa and wheat seedlings exposed to CNTs. Remarkably, catalyst impurities also enhanced root elongation in alfalfa seedlings as well as wheat germination. Thus the impurities, not solely the CNTs, impacted the plants. CNT internalization by plants was investigated using electron microscopy and two-dimensional Raman mapping. The latter showed that CNTs were adsorbed onto the root surfaces of alfalfa and wheat without significant uptake or translocation. Electron microscopy investigations of internalization were inconclusive owing to poor contrast, so Fe(3)O(4)-functionalized CNTs were prepared and studied using energy-filter mapping of Fe(3)O(4). CNTs bearing Fe(3)O(4) nanoparticles were detected in the epidermis of one wheat root tip only, suggesting that internalization was possible but unusual. Thus, alfalfa and wheat tolerated high concentrations of industrial-grade multiwalled CNTs, which adsorbed onto their roots but were rarely taken up.

  2. Sorption of inorganic salts on carbon nanomaterials and magnetite

    NASA Astrophysics Data System (ADS)

    Lyu, Sh. T.; Troshkina, I. D.; Rakov, E. G.

    2016-11-01

    Magnetic composites based on graphene oxides and functionalized carbon nanotubes containing magnetite nanoparticles are synthesized. The dispersing ability of these composites in water at different pH values is studied. It is shown that the solubility of Fe3O4 composites is constant in the pH range of 3.5-10, though these composites are unstable at both lower and higher pH values. Magnetic sorbents for extracting Ce(NO3)3 and La(NO3)3 from solutions are tested. Dependences of the volume on the sorbent's composition, pH value, and salt concentration in the solution are found. Maximum sorption capacity in relation to Ce3+ and La3+ at pH 7.5 and 8.5 are found to be 1040 and 920 mg/g respectively.

  3. Deviations of inorganic and organic carbon content in hypomineralised enamel.

    PubMed

    Taube, F; Marczewski, M; Norén, J G

    2015-02-01

    The purpose of this study was to discriminate hypomineralised enamel of permanent first molars from normal enamel by means of spectroscopic methods. The present study was conducted using Multi spot Raman Fourier Transform Spectroscopy, Diffuse Reflectance Infrared Fourier Transform Spectroscopy (FTIR) and X-ray diffraction (XRD). Raman spectroscopy indicated significantly more B-type carbonate and hydrocarbons in hypomineralised enamel diagnosed as MIH (Molar Incisor Hypomineralisation). From XRD analysis, no changes in crystallinity of the enamel apatite could be found. Using multi spot Raman-spectroscopy, a significant molecular discrimination between normal and hypomineralised enamel could be made. Detailed surface studies are needed in order to achieve better restorative materials, specifically designed for restoration of hypomineralised enamel, and are also needed in order to understand and predict the clinical consequences of hypomineralised enamel with the condition MIH. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Modelling carbon isotope composition of dissolved inorganic carbon and methane in marine porewaters

    NASA Astrophysics Data System (ADS)

    Meister, Patrick; Liu, Bo; Khalili, Arzhang; Barker Jørgensen, Bo

    2014-05-01

    Carbon isotope compositions of dissolved inorganic carbon (DIC) and methane (CH4) in marine sedimentary porewaters at near surface temperatures show extremely large variation in apparent fractionation covering a range from -100 ‰ to +30 ‰. This fractionation is essentially the result of microbial activity, but the mechanisms and factors controlling this fractionation are still incompletely understood. This study provides a reaction transport model approach to evaluate the effects of the most important processes and factors on carbon isotope distribution with the goal to better understand carbon isotope distribution in modern sediment porewaters and in the geological record. Our model results show that kinetic fractionation during methanogenesis, both through the acetoclastic and autotrophic pathways, results in a nearly symmetrical distribution of δ13C values in DIC and CH4 with respect to the isotope value of buried organic matter. An increased fractionation factor during methanogenesis leads to a larger difference between δ13CDIC and δ13CCH4. Near the sulphate methane transition zone, DIC is more depleted in 13C due to diffusive mixing with DIC produced by anaerobic oxidation of methane (AOM) and organoclastic sulphate reduction. The model also shows that an upward decrease in δ13CCH4 near the SMT can only be caused by equilibrium fractionation during AOM including a backward "leakage" of carbon from DIC to CH4 through the enzymatic pathway. However, this effect of reversibility has no influence on the DIC pool as long as methane is completely consumed at the SMT. Only a release of methane at the sediment-water interface, due to a fraction of the methane escaping re-oxidation, results in a small shift towards more positive δ13CDIC values. Methane escape at the SMT is possible if either the methane flux is too high to be entirely oxidized by AOM, or if bubbles of methane gas by-pass the sulphate reduction zone and escape episodically into the water column

  5. Calcium Carbonate Formation by Genetically Engineered Inorganic Binding Peptides

    NASA Astrophysics Data System (ADS)

    Gresswell, Carolyn Gayle

    Understanding how organisms are capable of forming (synthesize, crystallize, and organize) solid minerals into complex architectures has been a fundamental question of biomimetic materials chemistry and biomineralization for decades. This study utilizes short peptides selected using a cell surface display library for the specific polymorphs of calcium carbonate, i.e., aragonite and calcite, to identify two sets of sequences which can then be used to examine their effects in the formation, crystal structure, morphology of the CaCO3 minerals. A procedure of counter selection, along with fluorescence microscopy (FM) characterization, was adapted to insure that the sequences on the cells were specific to their respective substrate, i.e., aragonite or calcite. From the resulting two sets of sequences selected, five distinct strong binders were identified with a variety of biochemical characteristics and synthesized for further study. Protein derived peptides, using the known sequences of the proteins that are associated with calcite or aragonite, were also designed using a bioinformatics-based similarity analysis of the two sets of binders. In particular, an aragonite binding protein segment, AP7, a protein found in nacre, was chosen for this design and the resulting effects of the designed peptides and the AP7 were examined. Specifically, the binding affinities of the selected and the protein derived peptides off the cells were then tested using FM; these studies resulted in different binding characteristics of the synthesized and cellular bound peptides. Two of the peptides that displayed strong binding on the cells bound to neither of the CaCO 3 substrates and both the high and low similarity protein-derived peptides bound to both polymorphs. However, two of the peptides were found to only bind to their respective polymorph showing; these results are significant in that with this study it is demonstrated that the designed peptides based on experimental library

  6. Sources of dissolved inorganic carbon to the Canada Basin halocline: A multitracer study

    NASA Astrophysics Data System (ADS)

    Brown, Kristina A.; McLaughlin, Fiona; Tortell, Philippe D.; Yamamoto-Kawai, Michiyo; Francois, Roger

    2016-05-01

    We examine the dissolved inorganic carbon maximum in the Canada Basin halocline using a suite of geochemical tracers to gain insight into the factors that contribute to the persistence of this feature. Hydrographic and geochemical samples were collected in the upper 500 m of the southwestern Canada Basin water column in the summer of 2008 and fall of 2009. These observations were used to identify conservative and nonconservative processes that contribute dissolved inorganic carbon to halocline source waters, including shelf sediment organic matter remineralization, air-sea gas exchange, and sea-ice brine export. Our results indicate that the remineralization of organic matter that occurs along the Bering and Chukchi Sea shelves is the overwhelming contributor of dissolved inorganic carbon to Pacific Winter Water that occupies the middle halocline in the southwestern Canada Basin. Nonconservative contributions from air-sea exchange and sea-ice brine are not significant. The broad salinity range associated with the DIC maximum, compared to the narrow salinity range of the nutrient maximum, is due to mixing between Pacific and Atlantic water and not abiotic addition of DIC.

  7. Storage/Turnover Rate of Inorganic Carbon and Its Dissolvable Part in the Profile of Saline/Alkaline Soils

    PubMed Central

    Wang, Yugang; Wang, Zhongyuan; Li, Yan

    2013-01-01

    Soil inorganic carbon is the most common form of carbon in arid and semiarid regions, and has a very long turnover time. However, little is known about dissolved inorganic carbon storage and its turnover time in these soils. With 81 soil samples taken from 6 profiles in the southern Gurbantongute Desert, China, we investigated the soil inorganic carbon (SIC) and the soil dissolved inorganic carbon (SDIC) in whole profiles of saline and alkaline soils by analyzing their contents and ages with radiocarbon dating. The results showed that there is considerable SDIC content in SIC, and the variations of SDIC and SIC contents in the saline soil profile were much larger than that in the alkaline profile. SDIC storage accounted for more than 20% of SIC storage, indicating that more than 1/5 of the inorganic carbon in both saline and alkaline soil is not in non-leachable forms. Deep layer soil contains considerable inorganic carbon, with more than 80% of the soil carbon stored below 1 m, whether for SDIC or SIC. More importantly, SDIC ages were much younger than SIC in both saline soil and alkaline soil. The input rate of SDIC and SIC ranged from 7.58 to 29.54 g C m-2 yr-1 and 1.34 to 5.33 g C m-2 yr-1 respectively for saline soil, and from 1.43 to 4.9 g C m-2 yr-1 and 0.79 to 1.27 g C m-2 yr-1respectively for alkaline soil. The comparison of SDIC and SIC residence time showed that using soil inorganic carbon to estimate soil carbon turnover would obscure an important fraction that contributes to the modern carbon cycle: namely the shorter residence and higher input rate of SDIC. This is especially true for SDIC in deep layers of the soil profile. PMID:24312399

  8. Storage/Turnover rate of inorganic carbon and its dissolvable part in the profile of saline/alkaline soils.

    PubMed

    Wang, Yugang; Wang, Zhongyuan; Li, Yan

    2013-01-01

    Soil inorganic carbon is the most common form of carbon in arid and semiarid regions, and has a very long turnover time. However, little is known about dissolved inorganic carbon storage and its turnover time in these soils. With 81 soil samples taken from 6 profiles in the southern Gurbantongute Desert, China, we investigated the soil inorganic carbon (SIC) and the soil dissolved inorganic carbon (SDIC) in whole profiles of saline and alkaline soils by analyzing their contents and ages with radiocarbon dating. The results showed that there is considerable SDIC content in SIC, and the variations of SDIC and SIC contents in the saline soil profile were much larger than that in the alkaline profile. SDIC storage accounted for more than 20% of SIC storage, indicating that more than 1/5 of the inorganic carbon in both saline and alkaline soil is not in non-leachable forms. Deep layer soil contains considerable inorganic carbon, with more than 80% of the soil carbon stored below 1 m, whether for SDIC or SIC. More importantly, SDIC ages were much younger than SIC in both saline soil and alkaline soil. The input rate of SDIC and SIC ranged from 7.58 to 29.54 g C m(-2) yr(-1) and 1.34 to 5.33 g C m(-2) yr(-1) respectively for saline soil, and from 1.43 to 4.9 g C m(-2) yr(-1) and 0.79 to 1.27 g C m(-2) yr(-1)respectively for alkaline soil. The comparison of SDIC and SIC residence time showed that using soil inorganic carbon to estimate soil carbon turnover would obscure an important fraction that contributes to the modern carbon cycle: namely the shorter residence and higher input rate of SDIC. This is especially true for SDIC in deep layers of the soil profile.

  9. Carbon uptake sensitivity of the North Atlantic to climate change: A model study with the Bergen Climate Model

    NASA Astrophysics Data System (ADS)

    Goris, Nadine; Heinze, Christoph; Tjiputra, Jerry; Schwinger, Jörg

    2015-04-01

    mostly the subtropical gyre). The uptake reduction takes place mainly in the SPG-region accounting for 64.67% of the uptake differences in the North Atlantic. Further analysis shows that the changing CO2-flux in both SPG- and rNAT*-region is driven by an increasing oceanic pCO2, but the underlying mechanisms differ substantially. The pCO2-changes in the rNAT*-region are dominated by physical processes, that is increasing sea surface temperatures and a reduced freshwater flux. The latter processes are only of secondary importance for the pCO2 changes in the SPG-region, which are driven by reduced surface concentrations of dissolved inorganic carbon (DIC) and alkalinity. While the DIC concentration is reduced due to a decreasing DIC-transport into the SPG-region and a reduced carbon flux (both processes are counteracted by a declining biological production), the alkalinity concentration is reduced by the decreasing biological production (counteracted by a declining alkalinity-transport out of the SPG-region). The modeled interaction of deep convection (downwelling), high biological production, and surface circulation create the high climate sensitivity of carbon uptake in the SPG-region.

  10. Stable isotope mass balances versus concentration differences of dissolved inorganic carbon - implications for tracing carbon turnover in reservoirs.

    PubMed

    Barth, Johannes A C; Mader, Michael; Nenning, Franziska; van Geldern, Robert; Friese, Kurt

    2017-08-01

    The aim of this study was to identify sources of carbon turnover using stable isotope mass balances. For this purpose, two pre-reservoirs in the Harz Mountains (Germany) were investigated for their dissolved and particulate carbon contents (dissolved inorganic carbon (DIC), dissolved organic carbon, particulate organic carbon) together with their stable carbon isotope ratios. DIC concentration depth profiles from March 2012 had an average of 0.33 mmol L(-1). Increases in DIC concentrations later on in the year often corresponded with decreases in its carbon isotope composition (δ(13)CDIC) with the most negative value of -18.4 ‰ in September. This led to a carbon isotope mass balance with carbon isotope inputs of -28.5 ‰ from DOC and -23.4, -31.8 and -30.7 ‰ from algae, terrestrial and sedimentary matter, respectively. Best matches between calculated and measured DIC gains were achieved when using the isotope composition of algae. This shows that this type of organic material is most likely responsible for carbon additions to the DIC pool when its concentrations and δ(13)CDIC values correlate negatively. The presented isotope mass balance is transferable to other surface water and groundwater systems for quantification of organic matter turnover.

  11. Inorganic markers, carbonaceous components and stable carbon isotope from biomass burning aerosols in Northeast China.

    PubMed

    Cao, Fang; Zhang, Shi-Chun; Kawamura, Kimitaka; Zhang, Yan-Lin

    2016-12-01

    To better characterize the chemical compositions and sources of fine particulate matter (i.e. PM2.5) in Sanjiang Plain, Northeast China, total carbon (TC), organic carbon (OC), elemental carbon (EC), water-soluble organic carbon (WSOC), and inorganic ions as well as stable carbon isotopic composition (δ(13)C) were measured in this study. Intensively open biomass burning episodes are identified from late September to early October by satellite fire and aerosol optical depth maps. During the biomass-burning episode, concentrations of PM2.5, OC, EC, and WSOC are increased by a factor of 4-12 compared to those during the non-biomass-burning period. Non-sea-salt potassium is strongly correlated with PM2.5, OC, EC and WSOC, demonstrating an important contribution from biomass-burning emissions. The enrichment in both the non-sea-salt potassium and chlorine is significantly larger than other inorganic species, suggesting that biomass-burning aerosols in Sanjiang Plain are mostly fresh and less aged. In addition, the WSOC-to-OC ratio is lower than that reported in biomass-burning aerosols in tropical regions, further supporting that biomass-burning aerosols in Sanjiang Plain are mostly primary and secondary organic aerosols may be not significant. A lower average δ(13)C value (-26.2‰) is observed during the biomass-burning period, indicating a dominant contribution from combustion of C3 plants in the studied region.

  12. Inorganic carbon dynamics of melt-pond-covered first-year sea ice in the Canadian Arctic

    NASA Astrophysics Data System (ADS)

    Geilfus, N.-X.; Galley, R. J.; Crabeck, O.; Papakyriakou, T.; Landy, J.; Tison, J.-L.; Rysgaard, S.

    2015-03-01

    Melt pond formation is a common feature of spring and summer Arctic sea ice, but the role and impact of sea ice melt and pond formation on both the direction and size of CO2 fluxes between air and sea is still unknown. Here we report on the CO2-carbonate chemistry of melting sea ice, melt ponds and the underlying seawater as well as CO2 fluxes at the surface of first-year landfast sea ice in the Resolute Passage, Nunavut, in June 2012. Early in the melt season, the increase in ice temperature and the subsequent decrease in bulk ice salinity promote a strong decrease of the total alkalinity (TA), total dissolved inorganic carbon (TCO2) and partial pressure of CO2 (pCO2) within the bulk sea ice and the brine. As sea ice melt progresses, melt ponds form, mainly from melted snow, leading to a low in situ melt pond pCO2 (36 μatm). The percolation of this low salinity and low pCO2 meltwater into the sea ice matrix decreased the brine salinity, TA and TCO2, and lowered the in situ brine pCO2 (to 20 μatm). This initial low in situ pCO2 observed in brine and melt ponds results in air-ice CO2 fluxes ranging between -0.04 and -5.4 mmol m-2 day-1 (negative sign for fluxes from the atmosphere into the ocean). As melt ponds strive to reach pCO2 equilibrium with the atmosphere, their in situ pCO2 increases (up to 380 μatm) with time and the percolation of this relatively high concentration pCO2 meltwater increases the in situ brine pCO2 within the sea ice matrix as the melt season progresses. As the melt pond pCO2 increases, the uptake of atmospheric CO2 becomes less significant. However, since melt ponds are continuously supplied by meltwater, their in situ pCO2 remains undersaturated with respect to the atmosphere, promoting a continuous but moderate uptake of CO2 (~ -1 mmol m-2 day-1) into the ocean. Considering the Arctic seasonal sea ice extent during the melt period (90 days), we estimate an uptake of atmospheric CO2 of -10.4 Tg of C yr-1. This represents an additional

  13. CONTINUOUS, AUTOMATED AND SIMULTANEOUS MEASUREMENT OF OXYGEN UPTAKE AND CARBON DIOXIDE EVOLUTION IN BIOLOGICAL SYSTEMS

    EPA Science Inventory

    Commercial respirometers are capable of continuously and automatically measuring oxygen uptake in bioreactors. A method for continuously and automatically measuring carbon dioxide evolution can be retrofitted to commercial respirometers. Continuous and automatic measurements of...

  14. CONTINUOUS, AUTOMATED AND SIMULTANEOUS MEASUREMENT OF OXYGEN UPTAKE AND CARBON DIOXIDE EVOLUTION IN BIOLOGICAL SYSTEMS

    EPA Science Inventory

    Commercial respirometers are capable of continuously and automatically measuring oxygen uptake in bioreactors. A method for continuously and automatically measuring carbon dioxide evolution can be retrofitted to commercial respirometers. Continuous and automatic measurements of...

  15. Effects of inorganic carbon concentration on carbon formation, nitrate utilization, biomass and oil accumulation of Nannochloropsis oculata CS 179.

    PubMed

    Lin, Qiang; Gu, Na; Li, Gang; Lin, Junda; Huang, Liangmin; Tan, LingLing

    2012-05-01

    This investigation examined the effects of the inorganic carbon concentration (4, 0.8 and 0 g/L NaHCO(3)) on the carbon formation, nitrate utilization, growth and fatty acids compositions of Nannochloropsis oculata. The dissolved inorganic carbon (DIC) concentration in the three treatments decreased sharply during the first 6 days, and the percentage of dissolved organic carbon (DOC) (% of total organic carbon (TOC)) decreased with the depletion of the DIC. The NO(3)(-) assimilation of the algae was correlated with the DIC concentration. The algae in the highest DIC treatment had the highest specific grow rate (0.0843 d(-1)) (P<0.0001), and their biomass and fatty acid methyl esters (FAME) productivity were 84.00 and 9.69 mg/L/d, respectively (P<0.0001). Contents of C16 and C18 series (% of FAME) were high and the C16:0 increased with the decrease of C18:1 during the cultivation. The iodine value (IV) of the algae was low at the low DIC media.

  16. Rapid carbon-carbon bond formation and cleavage revealed by carbon isotope exchange between the carboxyl carbon and inorganic carbon in hydrothermal fluids

    NASA Astrophysics Data System (ADS)

    Glein, C. R.; Cody, G. D.

    2013-12-01

    The carbon isotopic composition of organic compounds in water-rock systems (e.g., hydrothermal vents, sedimentary basins, and carbonaceous meteorites) is generally interpreted in terms of the isotopic composition of the sources of such molecules, and the kinetic isotope effects of metabolic or abiotic reactions that generate or transform such molecules. This hinges on the expectation that the carbon isotopic composition of many organic compounds is conserved under geochemical conditions. This expectation is reasonable in light of the strength of carbon-carbon bonds (ca. 81 kcal/mol); in general, environmental conditions conducive to carbon-carbon bond cleavage typically lead to transformations of organic molecules (decarboxylation is a notable example). Geochemically relevant reactions that involve isotopic exchange between carbon atoms in organic molecules and inorganic forms of carbon with no change in molecular structure appear to be rare. Notwithstanding such rarity, there have been preliminary reports of relatively rapid carbon isotope exchange between the carboxyl group in carboxylic acids and carbon dioxide in hot water [1,2]. We have performed laboratory hydrothermal experiments to gain insights into the mechanism of this surprising reaction, using phenylacetate as a model structure. By mass spectrometry, we confirm that the carboxyl carbon undergoes facile isotopic exchange with 13C-labeled bicarbonate at moderate temperatures (i.e., 230 C). Detailed kinetic analysis reveals that the reaction rate is proportional to the concentrations of both reactants. Further experiments demonstrate that the exchange reaction only occurs if the carbon atom adjacent to the carboxyl carbon is bonded to a hydrogen atom. As an example, no carbon isotope exchange was observed for benzoate in experiments lasting up to one month. The requirement of an alpha C-H bond suggests that enolization (i.e., deprotonation of the H) is a critical step in the mechanism of the exchange

  17. Does Ocean Color Data Assimilation Improve Estimates of Global Ocean Inorganic Carbon?

    NASA Technical Reports Server (NTRS)

    Gregg, Watson

    2012-01-01

    Ocean color data assimilation has been shown to dramatically improve chlorophyll abundances and distributions globally and regionally in the oceans. Chlorophyll is a proxy for phytoplankton biomass (which is explicitly defined in a model), and is related to the inorganic carbon cycle through the interactions of the organic carbon (particulate and dissolved) and through primary production where inorganic carbon is directly taken out of the system. Does ocean color data assimilation, whose effects on estimates of chlorophyll are demonstrable, trickle through the simulated ocean carbon system to produce improved estimates of inorganic carbon? Our emphasis here is dissolved inorganic carbon, pC02, and the air-sea flux. We use a sequential data assimilation method that assimilates chlorophyll directly and indirectly changes nutrient concentrations in a multi-variate approach. The results are decidedly mixed. Dissolved organic carbon estimates from the assimilation model are not meaningfully different from free-run, or unassimilated results, and comparisons with in situ data are similar. pC02 estimates are generally worse after data assimilation, with global estimates diverging 6.4% from in situ data, while free-run estimates are only 4.7% higher. Basin correlations are, however, slightly improved: r increase from 0.78 to 0.79, and slope closer to unity at 0.94 compared to 0.86. In contrast, air-sea flux of C02 is noticeably improved after data assimilation. Global differences decline from -0.635 mol/m2/y (stronger model sink from the atmosphere) to -0.202 mol/m2/y. Basin correlations are slightly improved from r=O.77 to r=0.78, with slope closer to unity (from 0.93 to 0.99). The Equatorial Atlantic appears as a slight sink in the free-run, but is correctly represented as a moderate source in the assimilation model. However, the assimilation model shows the Antarctic to be a source, rather than a modest sink and the North Indian basin is represented incorrectly as a sink

  18. Photoproduction of dissolved organic carbon and inorganic nutrients from resuspended lake sediments.

    PubMed

    Hu, Bin; Wang, Peifang; Zhang, Nannan; Wang, Chao; Ao, Yanhui

    2016-11-01

    Sediments exposed to simulated solar radiation can serve as an important source of dissolved organic carbon (DOC) to surrounding waters. However, it is still unclear if dissolved nutrients can be photoproduced from lake sedimentary organic matter. In this study, a series of laboratory-based experiments was conducted to address the photoproduction of dissolved inorganic nutrients and DOC from resuspended Taihu Lake sediments. Dissolved inorganic nutrients and DOC were photoproduced after 8-h irradiation. The released NH4(+), NOx(-), and DOC levels ranged from 3.57 to 12.14, 1.43 to 6.43, and 24.17 to 69.17 μmol L(-1), respectively. The variation in the amount released indicated that sediment source had an effect on DOC and nutrient photorelease. More DOC and nutrients were released from higher concentration suspensions. However, due to the light absorption by suspended sediment, less DOC and nutrients were released from per gram of suspended sediment in high concentration suspensions. The decrease in DOC and increase in dissolved inorganic nitrogen during the last 2-h irradiation indicated that the photoproduction of inorganic nutrients proceeded via direct photodissolution of suspended sediments and subsequent photodegradation of the produced dissolved organic matter. Our results demonstrated that the photoproduction flux of NH4(+) and NOx(-) accounts for 12.3 and 6.5 % of wet deposition, respectively, which suggest that the photodissolution of suspended sediment could be a potential source of DOC and dissolved nutrients in shallow water ecosystems.

  19. Net carbon uptake has increased through warming-induced changes in temperate forest phenology

    SciTech Connect

    Keenan, Trevor; Gray, Josh; Friedl, Mark; Toomey, Michael; Bohrer, Gil; Hollinger, David; Munger, J. William; OKeefe, John; Hans, Schmid; Wing, Ian; Yang, Bai; Richardson, Andrew D.

    2014-01-01

    The timing of phenological events exerts a strong control over ecosystem function and leads to multiple feedbacks to the climate system1. Phenology is inherently sensitive to temperature (though the exact sensitivity is disputed2) and recent warming is reported to have led to earlier spring, later autumn3,4 and increased vegetation activity5,6. Such greening could be expected to enhance ecosystem carbon uptake7,8, though reports also suggest decreased uptake for boreal forests4,9. Here we assess changes in phenology of temperate forests over the eastern US during the past two decades, and quantify the resulting changes in forest carbon storage. We combine long-term ground observations of phenology, satellite indices, and ecosystem-scale carbon dioxide flux measurements, along with 18 terrestrial biosphere models. We observe a strong trend of earlier spring and later autumn. In contrast to previous suggestions4,9 we show that carbon uptake through photosynthesis increased considerably more than carbon release through respiration for both an earlier spring and later autumn. The terrestrial biosphere models tested misrepresent the temperature sensitivity of phenology, and thus the effect on carbon uptake. Our analysis of the temperature-phenology-carbon coupling suggests a current and possible future enhancement of forest carbon uptake due to changes in phenology. This constitutes a negative feedback to climate change, and is serving to slow the rate of warming.

  20. Spatial sensitivity of inorganic carbon to model setup: North Sea and Baltic Sea with ECOSMO

    NASA Astrophysics Data System (ADS)

    Castano Primo, Rocio; Schrum, Corinna; Daewel, Ute

    2015-04-01

    In ocean biogeochemical models it is critical to capture the key processes adequately so they do not only reproduce the observations but that those processes are reproduced correctly. One key issue is the choice of parameters, which in most cases are estimates with large uncertainties. This can be the product of actual lack of detailed knowledge of the process, or the manner the processes are implemented, more or less complex. In addition, the model sensitivity is not necessarily homogenous across the spatial domain modelled, which adds another layer of complexity to biogeochemical modelling. In the particular case of the inorganic carbon cycle, there are several sets of carbonate constants that can be chosen. The calculated air-sea CO2 flux is largely dependent on the parametrization chosen. In addition, the different parametrizations all the underlying processes that in some way impact the carbon cycle beyond the carbonate dissociation and fluxes give results that can be significantly different. Examples of these processes are phytoplankton growth rates or remineralization rates. Despite their geographical proximity, the North and Baltic Seas exhibit very different dynamics. The North Sea receives important inflows of Atlantic waters, while the Baltic Sea is an almost enclosed system, with very little exchange from the North Sea. Wind, tides, and freshwater supply act very differently, but dominantly structure the ecosystem dynamics on spatial and temporal scales. The biological community is also different. Cyanobacteria, which are important due to their ability to fix atmospheric nitrogen, and they are only present in the Baltic Sea. These differentiating features have a strong impact in the biogeochemical cycles and ultimately shape the variations in the carbonate chemistry. Here the ECOSMO model was employed on the North Sea and Baltic Sea. The model is set so both are modelled at the same time, instead of having them run separately. ECOSMO is a 3-D coupled

  1. Activation and splitting of carbon dioxide on the surface of an inorganic electride material.

    PubMed

    Toda, Yoshitake; Hirayama, Hiroyuki; Kuganathan, Navaratnarajah; Torrisi, Antonio; Sushko, Peter V; Hosono, Hideo

    2013-01-01

    Activation of carbon dioxide is the most important step in its conversion into valuable chemicals. Surfaces of stable oxide with a low work function may be promising for this purpose. Here we report that the surfaces of the inorganic electride [Ca24Al28O64](4+)(e(-))4 activate and split carbon dioxide at room temperature. This behaviour is attributed to a high concentration of localized electrons in the near-surface region and a corrugation of the surface that can trap oxygen atoms and strained carbon monoxide and carbon dioxide molecules. The [Ca24Al28O64](4+)(e(-))4 surface exposed to carbon dioxide is studied using temperature-programmed desorption, and spectroscopic methods. The results of these measurements, corroborated with ab initio simulations, show that both carbon monoxide and carbon dioxide adsorb on the [Ca24Al28O64](4+)(e(-))4 surface at RT and above and adopt unusual configurations that result in desorption of molecular carbon monoxide and atomic oxygen upon heating.

  2. Activation and splitting of carbon dioxide on the surface of an inorganic electride material

    PubMed Central

    Toda, Yoshitake; Hirayama, Hiroyuki; Kuganathan, Navaratnarajah; Torrisi, Antonio; Sushko, Peter V.; Hosono, Hideo

    2013-01-01

    Activation of carbon dioxide is the most important step in its conversion into valuable chemicals. Surfaces of stable oxide with a low work function may be promising for this purpose. Here we report that the surfaces of the inorganic electride [Ca24Al28O64]4+(e−)4 activate and split carbon dioxide at room temperature. This behaviour is attributed to a high concentration of localized electrons in the near-surface region and a corrugation of the surface that can trap oxygen atoms and strained carbon monoxide and carbon dioxide molecules. The [Ca24Al28O64]4+(e−)4 surface exposed to carbon dioxide is studied using temperature-programmed desorption, and spectroscopic methods. The results of these measurements, corroborated with ab initio simulations, show that both carbon monoxide and carbon dioxide adsorb on the [Ca24Al28O64]4+(e−)4 surface at RT and above and adopt unusual configurations that result in desorption of molecular carbon monoxide and atomic oxygen upon heating. PMID:23986101

  3. Robust sensor for extended autonomous measurements of surface ocean dissolved inorganic carbon.

    PubMed

    Fassbender, Andrea J; Sabine, Christopher L; Lawrence-Slavas, Noah; De Carlo, Eric H; Meinig, Christian; Maenner Jones, Stacy

    2015-03-17

    Ocean carbon monitoring efforts have increased dramatically in the past few decades in response to the need for better marine carbon cycle characterization. Autonomous pH and carbon dioxide (CO2) sensors capable of yearlong deployments are now commercially available; however, due to their strong covariance, this is the least desirable pair of carbonate system parameters to measure for high-quality, in situ, carbon-cycle studies. To expand the number of tools available for autonomous carbonate system observations, we have developed a robust surface ocean dissolved inorganic carbon (DIC) sensor capable of extended (>year) field deployments with a laboratory determined uncertainty of ±5 μmol kg(-1). Results from the first two field tests of this prototype sensor indicate that measurements of DIC are ∼90% more accurate than estimates of DIC calculated from contemporaneous and collocated measurements of pH and CO2. The improved accuracy from directly measuring DIC gives rise to new opportunities for quantitative, autonomous carbon-cycle studies.

  4. Isotopic Composition of Organic and Inorganic Carbon in Desert Biological Soil Crust Systems

    NASA Astrophysics Data System (ADS)

    Alexander, K.; Hartnett, H.; Anbar, A.; Beraldi, H.; Garcia-Pichel, F.

    2006-12-01

    Biological soil crusts (BSCs) are microbial communities that colonize soil surfaces in many arid regions. BSCs are important sources for fixed carbon and nitrogen in these ecosystems, and they greatly influence the structure, function, and appearance of desert soils. Biological activity of BSCs occurs during pulses of hydration requiring desert crusts to tolerate extremes in UV radiation, temperature, and desiccation. These characteristics make desert crusts unique systems that have received little consideration in the study of biogeochemical processes in extreme environments. This project investigates the impact of BSCs on carbon dynamics within desert soils. Soil cores ranging in depth from 8 to 12 cm were taken in March, 2006 from deserts near Moab, Utah. Two major BSC classes were identified: lichen-dominated (dark and pinnacled) soil crusts and cyanobacteria-dominated (light and flat) soil crusts. These two surface morphologies are related to the different biological communities. Carbon content and stable carbon isotopic composition were determined for the bulk carbon pool, as well as for the organic and inorganic carbon fractions of the soils. Expectedly, there was a net decrease in organic carbon content with depth (0.39-0.27 percent). Stable carbon isotope values for the organic fraction ranged from -5.8 per mil to -24.0 per mil (Avg: -14.4 per mil, S.D: 6.42 per mil). Stable carbon isotope values for the inorganic fraction ranged from 0.3 per mil to -3.6 per mil (Avg: -2.4 per mil, S.D.: 1.05 per mil). The variation in the isotopic composition of the organic carbon was due to a strong depletion below the surface soil value occurring between 3 and 5 cm depth, with an enrichment above the original surface value at depths below 6 to 10 cm. These data suggest that within desert soil crust systems the carbon isotopic signal is complex with both a clear biological imprint (lighter organic carbon) as well as evidence for some mechanism that results in

  5. Increase in observed net carbon dioxide uptake by land and oceans during the past 50 years.

    PubMed

    Ballantyne, A P; Alden, C B; Miller, J B; Tans, P P; White, J W C

    2012-08-02

    One of the greatest sources of uncertainty for future climate predictions is the response of the global carbon cycle to climate change. Although approximately one-half of total CO(2) emissions is at present taken up by combined land and ocean carbon reservoirs, models predict a decline in future carbon uptake by these reservoirs, resulting in a positive carbon-climate feedback. Several recent studies suggest that rates of carbon uptake by the land and ocean have remained constant or declined in recent decades. Other work, however, has called into question the reported decline. Here we use global-scale atmospheric CO(2) measurements, CO(2) emission inventories and their full range of uncertainties to calculate changes in global CO(2) sources and sinks during the past 50 years. Our mass balance analysis shows that net global carbon uptake has increased significantly by about 0.05 billion tonnes of carbon per year and that global carbon uptake doubled, from 2.4 ± 0.8 to 5.0 ± 0.9 billion tonnes per year, between 1960 and 2010. Therefore, it is very unlikely that both land and ocean carbon sinks have decreased on a global scale. Since 1959, approximately 350 billion tonnes of carbon have been emitted by humans to the atmosphere, of which about 55 per cent has moved into the land and oceans. Thus, identifying the mechanisms and locations responsible for increasing global carbon uptake remains a critical challenge in constraining the modern global carbon budget and predicting future carbon-climate interactions.

  6. Oceanic Carbon Dioxide Uptake in a Model of Century-Scale Global Warming

    PubMed

    Sarmiento; Le Quéré C

    1996-11-22

    In a model of ocean-atmosphere interaction that excluded biological processes, the oceanic uptake of atmospheric carbon dioxide (CO2) was substantially reduced in scenarios involving global warming relative to control scenarios. The primary reason for the reduced uptake was the weakening or collapse of the ocean thermohaline circulation. Such a large reduction in this ocean uptake would have a major impact on the future growth rate of atmospheric CO2. Model simulations that include a simple representation of biological processes show a potentially large offsetting effect resulting from the downward flux of biogenic carbon. However, the magnitude of the offset is difficult to quantify with present knowledge.

  7. Measurements of the stable carbon isotope composition of dissolved inorganic carbon in the northeastern Atlantic and Nordic Seas during summer 2012

    NASA Astrophysics Data System (ADS)

    Humphreys, M. P.; Achterberg, E. P.; Griffiths, A. M.; McDonald, A.; Boyce, A. J.

    2015-06-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in a batch process for 552 samples collected during two cruises in the northeastern Atlantic and Nordic Seas from June to August 2012. One cruise was part of the UK Ocean Acidification research programme, and the other was a repeat hydrographic transect of the Extended Ellett Line. In combination with measurements made of other variables on these and other cruises, these data can be used to constrain the anthropogenic component of dissolved inorganic carbon (DIC) in the interior ocean, and to help to determine the influence of biological carbon uptake on surface ocean carbonate chemistry. The measurements have been processed, quality-controlled and submitted to an in-preparation global compilation of seawater δ13CDIC data, and are available from the British Oceanographic Data Centre. The observed δ13CDIC values fall in a range from -0.58 to +2.37 ‰, relative to the Vienna Pee Dee Belemnite standard. The mean of the absolute differences between samples collected in duplicate in the same container type during both cruises and measured consecutively is 0.10 ‰, which corresponds to a 1σ uncertainty of 0.09 ‰, and which is within the range reported by other published studies of this kind. A crossover analysis was performed with nearby historical δ13CDIC data, indicating that any systematic offsets between our measurements and previously published results are negligible. Data doi:10.5285/09760a3a-c2b5-250b-e053-6c86abc037c0 (northeastern Atlantic), doi:10.5285/09511dd0-51db-0e21-e053-6c86abc09b95 (Nordic Seas).

  8. Predicting ocean carbon uptake in a warming climate: novel tracers and modeling approaches

    NASA Astrophysics Data System (ADS)

    Marinov, I.; Bernardello, R.; Palter, J. B.; Sarmiento, J. L.

    2012-12-01

    Under increasing atmospheric CO2 concentrations the changing Earth's radiative balance will influence the atmospheric and oceanic circulation. One of the consequences will be a modification of the ocean's ability to absorb and store CO2, which will feedback onto atmospheric CO2 and climate. To understand this detailed feedback process we carry out experiments in CM2Mc, a coarse version of the GFDL CM2, one of the climate models used in the IPCC Fourth Assessment report. The ocean's carbon uptake can be separated between solubility-driven and biologically-driven carbon pumps. A novel set of tracers in the ocean biogeochemical subroutine allows an unprecedented separation between these pumps. We run and analyze a control preindustrial run, wind-perturbation experiments and climate change simulations with atmospheric carbon concentrations rising according to historical (1880-2009) and projected IPCC scenarios. The simulation design allows us to quantify the separate (and in most cases opposing) impacts of 21st century winds and buoyancy forcing on the various ocean carbon pumps and on the anthropogenic CO2 uptake. The natural ocean carbon pump efficiency is shown to decrease over the 21st century, particularly in the Southern Ocean, slowing down the oceanic carbon uptake efficiency. Novel measures of ocean carbon pump strengths and carbon uptake efficiencies are discussed, as well as ways of analyzing the atmosphere-ocean carbon feedbacks in the system.

  9. Fluvial dissolved inorganic C dynamics in the Western Amazonian basin: where does this carbon come from?

    NASA Astrophysics Data System (ADS)

    Waldron, S.; Vihermaa, L. E.; Newton, J.; Krusche, A.; Salimon, C.

    2012-04-01

    The Amazon river and tributaries constitute globally a significant freshwater body and thus a source of atmospheric carbon dioxide. Aquatic carbon dioxide may originate from biological or physicochemical reprocessing of allochthonous dissolved, particulate or inorganic C (ecosystem-derived C, EDC) or it may derive from groundwater inputs of dissolved inorganic C through lithological weathering by soil-derived organic acids or by the dissolution of atmospheric carbon dioxide (minerogenic-derived C, MDC). In addition to quantifying and scaling catchment source import and export terms, accurate budgeting requires additional source differentiation. The significance of MDC is not usually considered by those assessing carbon dioxide efflux, yet differentiating MDC from EDC is crucial. For example, MDC should be less directly affected than EDC by future climatic change, becoming proportionally more important to fluvial carbon dioxide efflux in drought episodes. We are measuring the stable carbon isotopic ratio of dissolved inorganic C to determine the relative importance of MDC and EDC to total C loads in the Tambopata basin in Western Peru. This is an area little studied for C cycling, but important as the soils here are more nutrient rich than the remainder of the Amazon basin which is more studied. Our field station is in the Tambopata national park and since 2010 we have sampled four different river systems which vary in size and drainage characteristics: the Tambopata, (CA ~14,000 km sq.; ~30% of its in the Andes Mountains); La Torre (~2000 km sq.), New Colpita and Main Trail (both < 2 km sq. forest drainage but Main Trail only active in the wet season). Additionally the pH, conductivity, dissolved oxygen, water temperature and stage height have been monitored in these drainage systems where possible by logging at 15 minute intervals. Our data shows that there are statistically significant differences in carbon isotopic composition (ranging from -14 to -29 ‰) and

  10. Carbon Balance in an Irrigated Corn Field after Inorganic Fertilizer or Manure Application

    NASA Astrophysics Data System (ADS)

    Lentz, R. D.; Lehrsch, G. A.

    2014-12-01

    Little is known about inorganic fertilizer or manure effects on organic carbon (OC) and inorganic C (IC) losses from a furrow irrigated field, particularly in the context of other system C gains or losses. In 2003 and 2004, we measured dissolved organic and inorganic C (DOC, DIC), particulate OC and IC (POC, PIC) concentrations in irrigation inflow, runoff, and percolation waters (6-7 irrigations/y); C inputs from soil amendments and crop biomass; harvested C; and gaseous C emissions from field plots cropped to silage corn (Zea mays L.) in southern Idaho. Annual treatments included: (M) 13 (y 1) and 34 Mg/ha (y 2) stockpiled dairy manure; (F) 78 (yr 1) and 195 kg N/ha (y 2) inorganic N fertilizer; or (NA) no amendment--control. The mean annual total C input into M plots averaged 16.1 Mg/ha, 1.4-times greater than that for NA (11.5 Mg/ha) or F (11.1 Mg/ha), while total C outputs for the three treatments were similar, averaging 11.8 Mg/ha. Thus, the manure plots ended each growing season with an average net gain of 3.8 Mg C/ha (a positive net C flux), while the control (-0.5 Mg C/ha) and fertilizer (-0.4 Mg C/ha) treatments finished the season with a net C loss. Atmospheric CO2 incorporated into the crop biomass contributed 96% of the mean annual C input to NA and F plots but only 68% to M plots. We conclude that nutrient amendments substantially influence the short-term carbon balance of our furrow-irrigated system. Amendments had both direct and indirect influences on individual C components, such as the losses of DIC and POC in runoff and DOC in percolation water, producing temporally complex outcomes which may depend on environmental conditions external to the field.

  11. Oceanic heat, carbon uptake and enhanced Atlantic sea level rise under high carbon emission rates

    NASA Astrophysics Data System (ADS)

    Krasting, J. P.; Dunne, J. P.; Hallberg, R.; Stouffer, R. J.

    2016-12-01

    Thermal expansion of the ocean in response to anthropogenic climate warming is an important component of historical sea-level rise. Unlike global surface air temperature and other closely related climate variables that are nearly proportional to cumulative carbon emissions, the relationship between global sea level rise and cumulative emissions is less certain. The magnitude of sea level rise resulting from past carbon emissions depends on the integrated amount of warming and the time scales on which that warming occurs. Here, we present results from the GFDL-ESM2G model forced with range of idealized carbon emission rates - ranging from 2 to 25 Gt C yr-1 - that highlight the relationships between cumulative carbon emissions and heat and carbon uptake. Here we show that the Atlantic basin average sea level rise is larger than the Pacific on centennial time scales under present-day rates of carbon emissions and higher. This asymmetry relates to the shorter flushing time scales of the Atlantic and weakening of the Atlantic Meridional Overturning Circulation (AMOC). For a given level of cumulative emissions, we also find that sea-level rise is largest at low emission rates and is related to the long time scales of climate response associated with lower emission rates. While sea level rise is not proportional to cumulative emissions, our results do show, however, that there is a robust relationship between cumulative emissions and upper ocean (0-700m) Atlantic-minus-Pacific temperature differences across the range of emission rates tested with the model. In addition to local subsidence, changes in offshore winds, and ocean dynamical changes, we conclude that present-day high greenhouse gas emission rates make Atlantic coastal areas more vulnerable to sea-level rise over the coming decades. These results give further evidence that single global average measures become less representative of regional scale changes in sea level rise.

  12. Carbonate concretions as a significant component of ancient marine carbon cycles: Insights from paired organic and inorganic carbon isotope analyses of a Cretaceous shale

    NASA Astrophysics Data System (ADS)

    Loyd, S. J.

    2014-12-01

    Carbonate concretions often occur within fine-grained, organic-rich sedimentary rocks. This association reflects the common production of diagenetic minerals through biologic cycling of organic matter. Chemical analysis of carbonate concretions provides the rare opportunity to explore ancient shallow diagenetic environments, which are inherently transient due to progressive burial but are an integral component of the marine carbon cycle. The late Cretaceous Holz Shale (~80 Ma) contains abundant calcite concretions that exhibit textural and geochemical characteristics indicative of relatively shallow formation (i.e., near the sediment-water interface). Sampled concretions contain between 5.4 and 9.8 wt.% total inorganic carbon (TIC), or ~45 and 82 wt.% CaCO3, compared to host shale values which average ~1.5 wt.% TIC. Organic carbon isotope compositions (δ13Corg) are relatively constant in host and concretion samples ranging from ­-26.3 to -24.0‰ (VPDB). Carbonate carbon isotope compositions (δ13Ccarb) range from -22.5 to -3.4‰, indicating a significant but not entirely organic source of carbon. Concretions of the lower Holz Shale exhibit considerably elevated δ13Ccarb values averaging -4.8‰, whereas upper Holz Shale concretions express an average δ13Ccarb value of -17.0‰. If the remaining carbonate for lower Holz Shale concretions is sourced from marine fluids and/or dissolved marine carbonate minerals (e.g., shells), a simple mass balance indicates that ~28% of concretion carbon was sourced from organic matter and ~72% from late Cretaceous marine inorganic carbon (with δ13C ~ +2.5‰). Upper Holz Shale calculations indicate a ~73% contribution from organic matter and a ~27% contribution from inorganic carbon. When normalized for carbonate, organic contents within the concretions are ~2-13 wt.% enriched compared to host contents. This potentially reflects the protective nature of cementation that acts to limit permeability and chemical destruction of

  13. Carbon isotope fractionation of dissolved inorganic carbon (DIC) due to outgassing of carbon dioxide from a headwater stream

    USGS Publications Warehouse

    Doctor, D.H.; Kendall, C.; Sebestyen, S.D.; Shanley, J.B.; Ohte, N.; Boyer, E.W.

    2008-01-01

    The stable isotopic composition of dissolved inorganic carbon (??13C-DIC) was investigated as a potential tracer of streamflow generation processes at the Sleepers River Research Watershed, Vermont, USA. Downstream sampling showed ?? 13C-DIC increased between 3-5??? from the stream source to the outlet weir approximately 0??5 km downstream, concomitant with increasing pH and decreasing PCO2. An increase in ??13C-DIC of 2.4 ?? 0??1??? per log unit decrease of excess PCO2 (stream PCO2 normalized to atmospheric PCO2) was observed from downstream transect data collected during snowmelt. Isotopic fractionation of DIC due to CO2 outgassing rather than exchange with atmospheric CO2 may be the primary cause of increased ?? 13C-DIC values downstream when PCO2 of surface freshwater exceeds twice the atmospheric CO2 concentration. Although CO2 outgassing caused a general increase in stream ??13C-DIC values, points of localized groundwater seepage into the stream were identified by decreases in ??13C-DIC and increases in DIC concentration of the stream water superimposed upon the general downstream trend. In addition, comparison between snowmelt, early spring and summer seasons showed that DIC is flushed from shallow groundwater flowpaths during snowmelt and is replaced by a greater proportion of DIC derived from soil CO2 during the early spring growing season. Thus, in spite of effects from CO2 outgassing, ??13C of DIC can be a useful indicator of groundwater additions to headwater streams and a tracer of carbon dynamics in catchments. Copyright ?? 2007 John Wiley & Sons, Ltd.

  14. Shallow Remineralization in the Sargasso Sea Estimated from Seasonal Variations in Oxygen and Dissolved Inorganic Carbon

    NASA Technical Reports Server (NTRS)

    Ono, S.; Ennyu, A.; Najjar, R. G.; Bates, N.

    1998-01-01

    A diagnostic model of the mean annual cycles of dissolved inorganic carbon (DIC) and oxygen below the mixed layer at the Bermuda Atlantic Time-series Study (BATS) site is presented and used to estimate organic carbon remineralization in the seasonal thermocline. The model includes lateral and vertical advection as well as vertical, diffusion. Very good agreement is found for the remineralization estimates based on oxygen and DIC. Net remineralization averaged from mid-spring to early fall is found to be a maximum between 120 and 140 in. Remineralization integrated between 100 (the compensation depth) and 250 m during this period is estimated to be about 1 mol C/sq m. This flux is consistent with independent estimates of the loss of particulate and dissolved organic carbon.

  15. A systematic investigation of the preparation and properties of composite carbon molecular sieves containing inorganic oxides

    NASA Technical Reports Server (NTRS)

    Foley, Henry C.

    1990-01-01

    The objective of this research is to define the methodology for the preparation and characterization of new carbon-based molecular sieves with composite structures. Carbon molecular sieves have found increasing application in the field of separation and purification of gases. These materials are relatively easy to prepare and their surfaces can be modified to some extent. It is expected that by combining inorganic oxides with the carbonaceous structure one can begin to design composite materials with a wider range of possible chemical and physical properties. In this way, the IOM-CMS materials may confer distinct advantages over pure carbon molecular sieves, not just for separation, but also for catalysis. The most recent results in the design and characterization of these IOM-CMS materials are reviewed and summarized. Directions for further research are also presented.

  16. Switching predominance of organic versus inorganic carbon exports from an intermediate-size subarctic watershed

    USGS Publications Warehouse

    Dornblaser, Mark M.; Striegl, Robert G.

    2015-01-01

    Hydrologic exports of dissolved inorganic and organic carbon (DIC, DOC) reflect permafrost conditions in arctic and subarctic river basins. DIC yields in particular, increase with decreased permafrost extent. We investigated the influence of permafrost extent on DIC and DOC yield in a tributary of the Yukon River, where the upper watershed has continuous permafrost and the lower watershed has discontinuous permafrost. Our results indicate that DIC versus DOC predominance switches with interannual changes in water availability and flow routing in intermediate-size watersheds having mixed permafrost coverage. Large water yield and small concentrations from mountainous headwaters and small water yield and high concentrations from lowlands produced similar upstream and downstream carbon yields. However, DOC export exceeded DIC export during high-flow 2011 while DIC predominated during low-flow 2010. The majority of exported carbon derived from near-surface organic sources when landscapes were wet or frozen and from mineralized subsurface sources when infiltration increased.

  17. A systematic investigation of the preparation and properties of composite carbon molecular sieves containing inorganic oxides

    NASA Technical Reports Server (NTRS)

    Foley, Henry C.

    1990-01-01

    The objective of this research is to define the methodology for the preparation and characterization of new carbon-based molecular sieves with composite structures. Carbon molecular sieves have found increasing application in the field of separation and purification of gases. These materials are relatively easy to prepare and their surfaces can be modified to some extent. It is expected that by combining inorganic oxides with the carbonaceous structure one can begin to design composite materials with a wider range of possible chemical and physical properties. In this way, the IOM-CMS materials may confer distinct advantages over pure carbon molecular sieves, not just for separation, but also for catalysis. The most recent results in the design and characterization of these IOM-CMS materials are reviewed and summarized. Directions for further research are also presented.

  18. Carbon Availability Modifies Temperature Responses of Heterotrophic Microbial Respiration, Carbon Uptake Affinity, and Stable Carbon Isotope Discrimination.

    PubMed

    Min, Kyungjin; Lehmeier, Christoph A; Iv, Ford Ballantyne; Billings, Sharon A

    2016-01-01

    Microbial transformations of organic carbon (OC) generate a large flux of CO2 into the atmosphere and influence the C balance of terrestrial and aquatic ecosystems. Yet, inherent heterogeneity in natural environments precludes direct quantification of multiple microbial C fluxes that underlie CO2 production. Here we used a continuous flow bioreactor coupled with a stable C isotope analyzer to determine the effects of temperature and C availability (cellobiose concentration) on C fluxes and (13)C discrimination of a microbial population growing at steady-state in a homogeneous, well-mixed environment. We estimated C uptake affinity and C use efficiency (CUE) to characterize the physiological responses of microbes to changing environmental conditions. Temperature increased biomass-C specific respiration rate and C uptake affinity at lower C availability, but did not influence those parameters at higher C availability. CUE decreased non-linearly with increasing temperature. The non-linear, negative relationship between CUE and temperature was more pronounced under lower C availability than under relatively high C availability. We observed stable isotope fractionation between C substrate and microbial biomass C (7~12‰ depletion), and between microbial biomass and respired CO2 (4~10‰ depletion). Microbial discrimination against (13)C-containing cellobiose during C uptake was influenced by temperature and C availability, while discrimination during respiration was only influenced by C availability. Shifts in C uptake affinity with temperature and C availability may have modified uptake-induced (13)C fractionation. By stressing the importance of C availability on temperature responses of microbial C fluxes, C uptake affinity, CUE, and isotopic fractionation, this study contributes to a fundamental understanding of C flow through microbes. This will help guide parameterization of microbial responses to varying temperature and C availability within Earth-system models.

  19. Carbon Availability Modifies Temperature Responses of Heterotrophic Microbial Respiration, Carbon Uptake Affinity, and Stable Carbon Isotope Discrimination

    PubMed Central

    Min, Kyungjin; Lehmeier, Christoph A.; Billings, Sharon A.

    2016-01-01

    Microbial transformations of organic carbon (OC) generate a large flux of CO2 into the atmosphere and influence the C balance of terrestrial and aquatic ecosystems. Yet, inherent heterogeneity in natural environments precludes direct quantification of multiple microbial C fluxes that underlie CO2 production. Here we used a continuous flow bioreactor coupled with a stable C isotope analyzer to determine the effects of temperature and C availability (cellobiose concentration) on C fluxes and 13C discrimination of a microbial population growing at steady-state in a homogeneous, well-mixed environment. We estimated C uptake affinity and C use efficiency (CUE) to characterize the physiological responses of microbes to changing environmental conditions. Temperature increased biomass-C specific respiration rate and C uptake affinity at lower C availability, but did not influence those parameters at higher C availability. CUE decreased non-linearly with increasing temperature. The non-linear, negative relationship between CUE and temperature was more pronounced under lower C availability than under relatively high C availability. We observed stable isotope fractionation between C substrate and microbial biomass C (7~12‰ depletion), and between microbial biomass and respired CO2 (4~10‰ depletion). Microbial discrimination against 13C-containing cellobiose during C uptake was influenced by temperature and C availability, while discrimination during respiration was only influenced by C availability. Shifts in C uptake affinity with temperature and C availability may have modified uptake-induced 13C fractionation. By stressing the importance of C availability on temperature responses of microbial C fluxes, C uptake affinity, CUE, and isotopic fractionation, this study contributes to a fundamental understanding of C flow through microbes. This will help guide parameterization of microbial responses to varying temperature and C availability within Earth-system models. PMID

  20. Distribution of dissolved inorganic and organic carbon in the Eurasian Basin of the Arctic Ocean

    NASA Astrophysics Data System (ADS)

    Anderson, Leif G.; Olsson, Kristina; Skoog, Annelie

    Measurements of total carbonate (total inorganic carbon) and total organic carbon were carried out during the International Arctic Ocean Expedition 91 on three sections across the Nansen and Amundsen basins, and into the Makarov Basin. In the surface mixed layer a distinct front was observed to the north, identified by elevated total carbonate concentrations, reflecting the signature of Siberian river runoff. This front forms the southern border of the Siberian Branch of the Transpolar Drift, which is located over the northern part of the Nansen Basin, at the eastern part of the investigated area (about 30° E). To the west, the front is located over the tip of the Yermak Plateau, showing the very wide extent of the Transpolar Drift just north of the Fram Strait. Within the Siberian Branch, about 200 km north of the front, a maximum in the total organic carbon concentration may indicate a shorter residence time since the water left the river mouth, possibly related to a higher flow rate. At the tip of the Morris Jesup Plateau, clear signs of outflowing Canadian Basin waters are seen. In the surface layer, high total carbonate concentrations were present in the water of salinity 33.1, indicating upper halocline water. At intermediate depths (1500 - 2000 m), elevated total carbonate concentrations demonstrate the existence of the outflowing Canadian Basin intermediate water. Part of this outflowing water follows the continental slope to the south while part is injected into the Makarov Basin.

  1. Electrolytic aminated carbon materials for the electrocatalytic redox reactions of inorganic and organic compounds.

    PubMed

    Hayashida, Eriko; Takahashi, Yuichi; Nishi, Hideki; Uchiyama, Shunichi

    2011-06-01

    Some kinds of amine groups can be introduced to the glassy carbon surface by the electrode oxidation of the carbon electrode surface in ammonium carbamate solution, and this amine groups modified electrode is named as an aminated glassy carbon electrode. The existences of not only primary amine but also secondary and tertially amines were confirmed by X ray photoelectron spectroscopy. The applications of the aminated carbon material for the electrocatalytic reductions of oxygen, hydrogen peroxide, and organic compounds such as quinones were carried out, and the effects of amination on the formation of electrocatalytic sites for many species were revealed. The electrocatalyzed cyclic voltammograms of metal ions and metal chelate compounds obtained by aminated glassy carbon electrodes are also discussed. Moreover, we intend to describe that the aminated carbon electrode can exhibit the large reduction waves of inorganic oxoacids such as N02- or bromide ion. The introduced functional groups containing nitrogen atom can change the distribution of the electron densities of the graphite carbon surface, and this specific electron distribution environment may generate the various electrocatalytic activities. Copyright © 2011 The Research Centre for Eco-Environmental Sciences, Chinese Academy of Sciences. Published by Elsevier B.V. All rights reserved.

  2. Forest Carbon Uptake and the Fundamental Theorem of Calculus

    ERIC Educational Resources Information Center

    Zobitz, John

    2013-01-01

    Using the fundamental theorem of calculus and numerical integration, we investigate carbon absorption of ecosystems with measurements from a global database. The results illustrate the dynamic nature of ecosystems and their ability to absorb atmospheric carbon.

  3. Forest Carbon Uptake and the Fundamental Theorem of Calculus

    ERIC Educational Resources Information Center

    Zobitz, John

    2013-01-01

    Using the fundamental theorem of calculus and numerical integration, we investigate carbon absorption of ecosystems with measurements from a global database. The results illustrate the dynamic nature of ecosystems and their ability to absorb atmospheric carbon.

  4. Combined effects of inorganic carbon and light on Phaeocystis globosa Scherffel (Prymnesiophyceae)

    NASA Astrophysics Data System (ADS)

    Hoogstraten, A.; Peters, M.; Timmermans, K. R.; de Baar, H. J. W.

    2012-05-01

    Phaeocystis globosa (Prymnesiophyceae) is an ecologically dominating phytoplankton species in many areas around the world. It plays an important role in both the global sulfur and carbon cycles, by the production of dimethylsulfide (DMS) and the drawdown of inorganic carbon. Phaeocystis globosa has a polymorphic life cycle and is considered to be a harmful algal bloom (HAB) forming species. All these aspects make this an interesting species to study the effects of increasing carbon dioxide (CO2) concentrations, due to anthropogenic carbon emissions. Here, the combined effects of three different dissolved carbon dioxide concentrations (CO2(aq)) (low: 4 μmol kg-1, intermediate: 6-10 μmol kg-1 and high CO2(aq): 21-24 μmol kg-1) and two different light intensities (low light, suboptimal: 80 μmol photons m-2 s-1 and high light, light saturated: 240 μmol photons m-2 s-1) are reported. The experiments demonstrated that the specific growth rate of P. globosa in the high light cultures decreased with increasing CO2(aq) from 1.4 to 1.1 d-1 in the low and high CO2 cultures, respectively. Concurrently, the photosynthetic efficiency (FV/FM) increased with increasing CO2(aq) from 0.56 to 0.66. The different light conditions affected photosynthetic efficiency and cellular chlorophyll a concentrations, both of which were lower in the high light cultures as compared to the low light cultures. These results suggest that in future inorganic carbon enriched oceans, P. globosa will become less competitive and feedback mechanisms to global change may decrease in strength.

  5. Dissolved inorganic carbon and stable carbon isotopic evolution of neutral mine drainage interacting with atmospheric CO2(g).

    PubMed

    Abongwa, Pride Tamasang; Atekwana, Eliot Anong; Puckette, James

    2016-03-01

    We investigated the spatial variations in the concentrations of dissolved inorganic carbon (DIC), the stable carbon isotopic composition (δ(13)C) of DIC and the δ(13)C of carbonate precipitated from neutral mine drainage interacting with the atmospheric CO2(g). We assessed the chemical, DIC and δ(13)CDIC evolution of the mine drainage and the δ(13)C evolution of carbonate precipitates for a distance of 562 m from the end of an 8 km tunnel that drains a mine. Our results show that as the mine drainage interacts with atmospheric CO2(g) the outgassing of CO2 due to the high initial partial pressure of CO2 (pCO2) causes the DIC to evolve under kinetic conditions followed by equilibration and then under equilibrium conditions. The carbonate evolution was characterized by spatial increases in pH, decreasing concentrations of Ca(2+) and DIC and by the precipitation of carbonate. The δ(13)CDIC showed a larger enrichment from the tunnel exit to 38 m, moderate continuous enrichment to 318 m and almost no enrichment to 562 m. On the other hand, the δ(13)C of the carbonate precipitates also showed large enrichment from the tunnel exit to 38 m, moderate enrichment to 318 m after which the δ(13)C remained nearly constant. The enrichment in the δ(13)C of the DIC and the carbonate precipitates from 0 to 38 m from kinetic fractionation caused by CO2(g) outgassing was followed by a mix of kinetic fractionation and equilibrium fractionation controlled by carbon exchange between DIC and atmospheric CO2(g) to 318 m and then by equilibrium fractionation from 318 to 562 m. From the carbonate evolution in this neutral mine drainage, we estimated that 20% of the carbon was lost via CO2 outgassing, 12% was sequestered in sediments in the drainage ponds from calcite precipitation and the remainder 68% was exported to the local stream.

  6. Measurements of the stable carbon isotope composition of dissolved inorganic carbon in the Northeastern Atlantic and Nordic Seas during summer 2012

    NASA Astrophysics Data System (ADS)

    Humphreys, M. P.; Achterberg, E. P.; Griffiths, A. M.; McDonald, A.; Boyce, A. J.

    2015-01-01

    The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in samples collected during two cruises in the Northeastern Atlantic and Nordic Seas from June to August 2012. One cruise was part of the UK Ocean Acidification research programme, and the other was a repeat hydrographic transect of the Extended Ellett Line. In combination with measurements made of various other variables on these and other cruises, these data can be used to constrain the anthropogenic component of DIC in the interior ocean, and also assist in determining the influence of biological carbon uptake on surface ocean carbonate chemistry. The measurements have been processed, quality-controlled and submitted to an in-preparation global compilation of seawater δ13CDIC data, and are available from the British Oceanographic Data Centre. The observed δ13CDIC values fall in a range from -0.58 to +2.37‰, relative to the Vienna Peedee Belemnite standard. From duplicate samples collected during both cruises, the precision for the 552 results is 0.07‰, which is similar to other published studies of this kind. Data doi:10.5285/09760a3a-c2b5-250b-e053-6c86abc037c0 (Northeastern Atlantic), doi:10.5285/09511dd0-51db-0e21-e053-6c86abc09b95 (Nordic Seas).

  7. Effects of salinity and light on organic carbon and nitrogen uptake in a hypersaline microbial mat.

    PubMed

    Yannarell, Anthony C; Paerl, Hans W

    2007-12-01

    Utilization of dissolved organic matter (DOM) is thought to be the purview of heterotrophic microorganisms, but photoautotrophs can take up dissolved organic nitrogen (DON) and dissolved organic carbon (DOC). This study investigated DOC and DON uptake in a laminated cyanobacterial mat community from hypersaline Salt Pond (San Salvador, Bahamas). The total community uptake of (3)H-labeled substrates was measured in the light and in the dark and under conditions of high and low salinity. Salinity was the primary control of DOM uptake, with increased uptake occurring under low-salinity, 'freshened' conditions. DOC uptake was also enhanced in the light as compared with the dark and in samples incubated with the photosystem II inhibitor 3(3,4-dichlorophenyl)-1, 1-dimethylurea, suggesting a positive association between photosynthetic activity and DOC uptake. Microautoradiography revealed that some DOM uptake was attributed to cyanobacteria. Cyanobacteria DOM uptake was negatively correlated with that of smaller filamentous microorganisms, and DOM uptake by individual coccoid cells was negatively correlated with uptake by colonial coccoids. These patterns of activity suggest that Salt Pond microorganisms are engaged in resource partitioning, and DOM utilization may provide a metabolic boost to both heterotrophs and photoautrophs during periods of lowered salinity.

  8. Two decades of inorganic carbon dynamics along the West Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Hauri, C.; Doney, S. C.; Takahashi, T.; Erickson, M.; Jiang, G.; Ducklow, H. W.

    2015-11-01

    We present 20 years of seawater inorganic carbon measurements collected along the western shelf and slope of the Antarctic Peninsula. Water column observations from summertime cruises and seasonal surface underway pCO2 measurements provide unique insights into the spatial, seasonal, and interannual variability in this dynamic system. Discrete measurements from depths > 2000 m align well with World Ocean Circulation Experiment observations across the time series and underline the consistency of the data set. Surface total alkalinity and dissolved inorganic carbon data showed large spatial gradients, with a concomitant wide range of Ωarag (< 1 up to 3.9). This spatial variability was mainly driven by increasing influence of biological productivity towards the southern end of the sampling grid and meltwater input along the coast towards the northern end. Large inorganic carbon drawdown through biological production in summer caused high near-shore Ωarag despite glacial and sea-ice meltwater input. In support of previous studies, we observed Redfield behavior of regional C / N nutrient utilization, while the C / P (80.5 ± 2.5) and N / P (11.7 ± 0.3) molar ratios were significantly lower than the Redfield elemental stoichiometric values. Seasonal salinity-based predictions of Ωarag suggest that surface waters remained mostly supersaturated with regard to aragonite throughout the study. However, more than 20 % of the predictions for winters and springs between 1999 and 2013 resulted in Ωarag < 1.2. Such low levels of Ωarag may have implications for important organisms such as pteropods. Even though we did not detect any statistically significant long-term trends, the combination of on-going ocean acidification and freshwater input may soon induce more unfavorable conditions than the ecosystem experiences today.

  9. An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii.

    PubMed

    Wang, Yingjun; Spalding, Martin H

    2006-06-27

    Many photosynthetic microorganisms acclimate to CO(2) limited environments by induction and operation of CO(2)-concentrating mechanisms (CCMs). Despite their central role in CCM function, inorganic carbon (Ci) transport systems never have been identified in eukaryotic photosynthetic organisms. In the green alga Chlamydomonas reinhardtii, a mutant, pmp1, was described in 1983 with deficiencies in Ci transport, and a Pmp1 protein-associated Ci uptake system has been proposed to be responsible for Ci uptake in low CO(2) (air level)-acclimated cells. However, even though pmp1 represents the only clear genetic link to Ci transport in microalgae and is one of only a very few mutants directly affecting the CCM itself, the identity of Pmp1 has remained unknown. Physiological analyses indicate that C. reinhardtii possesses multiple Ci transport systems responsible for acclimation to different levels of limiting CO(2) and that the Pmp1-associated transport system is required specifically for low (air level) CO(2) acclimation. In the current study, we identified and characterized a pmp1 allelic mutant, air dier 1 (ad1) that, like pmp1, cannot grow in low CO(2) (350 ppm) but can grow either in high CO(2) (5% CO(2)) or in very low CO(2) (<200 ppm). Molecular analyses revealed that the Ad1/Pmp1 protein is encoded by LciB, a gene previously identified as a CO(2)-responsive gene. LciB and three related genes in C. reinhardtii compose a unique gene family that encode four closely related, apparently soluble plastid proteins with no clearly identifiable conserved motifs.

  10. The stoichiometric ratio during biological removal of inorganic carbon and nutrient in the Mississippi River plume and adjacent continental shelf

    NASA Astrophysics Data System (ADS)

    Huang, W.-J.; Cai, W.-J.; Powell, R. T.; Lohrenz, S. E.; Wang, Y.; Jiang, L.-Q.; Hopkinson, C. S.

    2012-02-01

    The stoichiometric ratios of dissolved inorganic carbon (DIC) and nutrients during biological removal have been widely assumed to follow the Redfield ratios (especially the C/N ratio) in large river plume ecosystems. However, this assumption has not been systematically examined and documented because DIC and nutrients are rarely studied simultaneously in a river plume area, a region in which they can be affected by strong river-ocean mixing as well as intense biological activity. We examined stoichiometric ratios of DIC, total alkalinity (TA), and nutrients (NO3, PO43- and Si(OH)4) data during biological removal in the Mississippi River plume and adjacent continental shelf in June 2003 and August 2004 with biological removals defined as the difference between measured values and values predicted on the basis of conservative mixing determined using a multi-endmember mixing model. Despite complex physical and biogeochemical influences, relationships between DIC and nutrients were strongly dependent on salinity range and geographic location, and influenced by biological removal. Lower C/Si and N/Si ratios in one nearshore area were attributed to a potential silicate source induced by water exchange with coastal salt marshes. When net biological uptake was separated from river-ocean mixing and the impact of marshes and bays excluded, stoichiometric ratios of C/N/Si were similar to the Redfield ratios, thus supporting the applicability of the Redfield-type C/N/Si ratios as a principle in river-plume biogeochemical models.

  11. Subsurface Monitor for Dissolved Inorganic Carbon at Geological Sequestration Site Phase 1 SBIR Final Report

    SciTech Connect

    Sheng Wu

    2012-08-03

    Phase I research of this SBIR contract has yielded anticipated results and enable us to develop a practical new instrument to measure the Dissolved Inorganic Carbons (DIC) as well as Supercritical (SC) CO2 in underground brine water at higher sensitivity, lower cost, higher frequency and longer period of time for the Monitoring, Verification & Accounting (MVA) of CO2 sequestration as well as Enhanced Oil Recovery (EOR). We show that reduced cost and improved performance are possible; both future and emerging market exist for the proposed new instrument.

  12. Effect of inorganic nutrients on relative contributions of fungi and bacteria to carbon flow from submerged decomposing leaf litter

    Treesearch

    Vladislav Gulis; Keller Suberkropp

    2003-01-01

    The relative contributions of fungi and bacteria to carbon flow from submerged decaying plant litter at different levels of inorganic nutrients (N and P) were studied. We estimated leaf mass loss, fungal and bacterial biomass and production, and microbial respiration and constructed partial carbon budgets for red maple leaf disks precolonized in a stream and then...

  13. On the relations between the oceanic uptake of CO{sub 2} and its carbon isotopes

    SciTech Connect

    Heimann, M.; Maier-Reimer, E.

    1996-03-01

    The first part of this paper reviews the derivation and compares the results of three methods to determine the oceanic uptake of excess carbon dioxide. For the time period 1970 to 1990, the three methods yield inconsistent uptake rates; however, a consistent scenario was established by using a nonlinear estimation to account for uncertainties in the available carbon cycle data. Parametric and sensitivity analyses show that the dynamic constraint and the ocean-atmosphere Carbon 13 budget methods appear to yield smaller errors in estimation of carbon dioxide uptake with respect to uncertainties in carbon cycle data. In the second part of this paper, two simulations of the three calculation methods are reported. The simulations used the three-dimensional Hamburg model of the ocean carbon cycle to determine the extent to which Carbon 13 and bomb radiocarbon may be used to track the fate of anthropogenic carbon dioxide in the ocean. Analysis of the simulation results shows that the Carbon 13 isotope tracks the oceanic penetration of man-made carbon dioxide, while bomb produced radiocarbon does not correlate as well. 52 refs., 9 figs., 3 tabs.

  14. Disequilibrium δ18O values in microbial carbonates as a tracer of metabolic production of dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Thaler, Caroline; Millo, Christian; Ader, Magali; Chaduteau, Carine; Guyot, François; Ménez, Bénédicte

    2017-02-01

    Carbon and oxygen stable isotope compositions of carbonates are widely used to retrieve paleoenvironmental information. However, bias may exist in such reconstructions as carbonate precipitation is often associated with biological activity. Several skeleton-forming eukaryotes have been shown to precipitate carbonates with significant offsets from isotopic equilibrium with water. Although poorly understood, the origin of these biologically-induced isotopic shifts in biogenic carbonates, commonly referred to as ;vital effects;, could be related to metabolic effects that may not be restricted to mineralizing eukaryotes. The aim of our study was to determine whether microbially-mediated carbonate precipitation can also produce offsets from equilibrium for oxygen isotopes. We present here δ18O values of calcium carbonates formed by the activity of Sporosarcina pasteurii, a carbonatogenic bacterium whose ureolytic activity produces ammonia (thus increasing pH) and dissolved inorganic carbon (DIC) that precipitates as solid carbonates in the presence of Ca2+. We show that the 1000 lnαCaCO3-H2O values for these bacterially-precipitated carbonates are up to 24.7‰ smaller than those expected for precipitation at isotopic equilibrium. A similar experiment run in the presence of carbonic anhydrase (an enzyme able to accelerate oxygen isotope equilibration between DIC and water) resulted in δ18O values of microbial carbonates in line with values expected at isotopic equilibrium with water. These results demonstrate for the first time that bacteria can induce calcium carbonate precipitation in strong oxygen isotope disequilibrium with water, similarly to what is observed for eukaryotes. This disequilibrium effect can be unambiguously ascribed to oxygen isotope disequilibrium between DIC and water inherited from the oxygen isotope composition of the ureolytically produced CO2, probably combined with a kinetic isotope effect during CO2 hydration/hydroxylation. The fact that

  15. Integration of inorganic nanostructures with polydopamine-derived carbon: tunable morphologies and versatile applications

    NASA Astrophysics Data System (ADS)

    Kong, Junhua; Seyed Shahabadi, Seyed Ismail; Lu, Xuehong

    2016-01-01

    Polydopamine (PDA), a mussel adhesive-inspired biomimetic polymer, has attracted tremendous attention owing to its extremely versatile adhesion properties, facile aqueous coating process, capability of self-assembly to form nanostructures, and abundant surface functional groups for secondary modification. PDA is also a fantastic carbon source because it gives nitrogen (N)-doped graphite-like carbon in high yield, and the carbonized PDA (C-PDA) thin coatings have similar properties to those of N-doped multilayered graphene, i.e., they exhibit high electrical conductivity, and good electrochemical and mechanical properties. In comparison with other carbon sources, an outstanding feature of PDA lies in its ease of integration with inorganic nanostructures and capability for easy tailoring the structure and morphology of the resultant composite nanostructures. In this article, different routes for the preparation of C-PDA-based composite nanostructures, such as carbon/metal oxide and carbon/Si hollow, mesoporous, core-shell, yolk-shell nanostructures, are introduced with typical examples. The structures, morphologies and properties of the C-PDA-based composite nanostructures are also reviewed, and their potential applications in various engineering fields, such as energy storage, solar water splitting, flexible electronics, catalysis, sensing and environmental engineering, are highlighted. Finally a future outlook for this fascinating composite-nanostructure enabler is also presented.

  16. Integration of inorganic nanostructures with polydopamine-derived carbon: tunable morphologies and versatile applications.

    PubMed

    Kong, Junhua; Seyed Shahabadi, Seyed Ismail; Lu, Xuehong

    2016-01-28

    Polydopamine (PDA), a mussel adhesive-inspired biomimetic polymer, has attracted tremendous attention owing to its extremely versatile adhesion properties, facile aqueous coating process, capability of self-assembly to form nanostructures, and abundant surface functional groups for secondary modification. PDA is also a fantastic carbon source because it gives nitrogen (N)-doped graphite-like carbon in high yield, and the carbonized PDA (C-PDA) thin coatings have similar properties to those of N-doped multilayered graphene, i.e., they exhibit high electrical conductivity, and good electrochemical and mechanical properties. In comparison with other carbon sources, an outstanding feature of PDA lies in its ease of integration with inorganic nanostructures and capability for easy tailoring the structure and morphology of the resultant composite nanostructures. In this article, different routes for the preparation of C-PDA-based composite nanostructures, such as carbon/metal oxide and carbon/Si hollow, mesoporous, core-shell, yolk-shell nanostructures, are introduced with typical examples. The structures, morphologies and properties of the C-PDA-based composite nanostructures are also reviewed, and their potential applications in various engineering fields, such as energy storage, solar water splitting, flexible electronics, catalysis, sensing and environmental engineering, are highlighted. Finally a future outlook for this fascinating composite-nanostructure enabler is also presented.

  17. [Biogeochemical processes of the major ions and dissolved inorganic carbon in the Guijiang River].

    PubMed

    Tang, Wen-Kui; Tao, Zhen; Gao, Quan-Zhou; Mao, Hai-Ruo; Jiang, Guang-Hui; Jiao, Shu-Lin; Zheng, Xiong-Bo; Zhang, Qian-Zhu; Ma, Zan-Wen

    2014-06-01

    Within the drainage basin, information about natural processes and human activities can be recorded in the chemical composition of riverine water. The analysis of the Guijiang River, the first level tributary of the Xijiang River, demonstrated that the chemical composition of water in the Guijiang River was mainly influenced by the chemical weathering of carbonate rocks within the drainage basin, in which CO2 was the main erosion medium, and that the weathering of carbonate rock by H2SO4 had a remarkable impact on the water chemical composition in the Guijiang River. Precipitation, human activities, the weathering of carbonate rocks and silicate rocks accounted for 2.7%, 6.3%, 72.8% and 18.2% of the total dissolved load, respectively. The stable isotopic compositions of dissolved inorganic carbon (delta13C(DIC)) indicated that DIC in the Guijiang River had been assimilated by the phytoplankton in photosynthesis. The primary production of phytoplankton contributed to 22.3%-30.9% of particulate organic carbon (POC) in the Guijiang River, which implies that phytoplankton can transform DIC into POC by photosynthesis, and parts of POC will sink into the bottom of the river in transit, which leads into the formation of burial organic carbon.

  18. Effect of carbon dioxide and bicarbonate as inorganic carbon sources on growth and adaptation of autohydrogenotrophic denitrifying bacteria.

    PubMed

    Ghafari, Shahin; Hasan, Masitah; Aroua, Mohamed Kheireddine

    2009-03-15

    Acclimation of autohydrogenotrophic denitrifying bacteria using inorganic carbon source (CO(2) and bicarbonate) and hydrogen gas as electron donor was performed in this study. In this regard, activated sludge was used as the seed source and sequencing batch reactor (SBR) technique was applied for accomplishing the acclimatization. Three distinct strategies in feeding of carbon sources were applied: (I) continuous sparging of CO(2), (II) bicarbonate plus continuous sparging of CO(2), and (III) only bicarbonate. The pH-reducing nature of CO(2) showed an unfavorable impact on denitrification rate; however bicarbonate resulted in a buffered environment in the mixed liquor and provided a suitable mean to maintain the pH in the desirable range of 7-8.2. As a result, bicarbonate as the only carbon source showed a faster adaptation, while carbon dioxide as the only carbon source as well as a complementary carbon source added to bicarbonate resulted in longer acclimation period. Adapted hydrogenotrophic denitrifying bacteria, using bicarbonate and hydrogen gas in the aforementioned pH range, caused denitrification at a rate of 13.33 mg NO(3)(-)-N/g MLVSS/h for degrading 20 and 30 mg NO(3)(-)-N/L and 9.09 mg NO(3)(-)-N/g MLVSS/h for degrading 50mg NO(3)(-)-N/L.

  19. The effect of temperature on carbon uptake and its fate in diverse strains of Prochlorococcus

    NASA Astrophysics Data System (ADS)

    Johnson, Z. I.

    2016-02-01

    The ecological success of the marine cyanobacteria Prochlorococcus is driven in part by its genomic diversity and the concentrations of the two dominant high light clades in the ocean have been shown to niche partition along latitudinal temperature gradients. Nevertheless, little is known about how temperature affects carbon uptake and its fate for these genetically distinct, yet closely related cyanobacteria. Here we present results from a series of steady state and temperature shift experiments. We show that as expected, temperature has a profound effect on carbon uptake and growth rate, but is different among the major clades of Prochlorococcus. However, the temperature response curves of carbon uptake and growth rate are uncoupled. Further, there are substantial differences among the clades in how temperature affects the partitioning of this carbon to particulate (i.e. retained) or dissolved (i.e. dissolved organic carbon release) fates. Physiology and transcriptomic data from temperature shift experiments show even more dramatic uncoupling of carbon uptake/fate growth rate (biomass accumulation or division) and regulation often with unexpected patterns. These results highlight the importance of temperature in poising the fundamental processes of Prochlorococcus photosynthesis and growth, and that the physiological and regulatory responses are different between the major genetic clades. These results also demonstrate that climate change, via increasing temperature, may significantly alter the distribution, biogeochemical rates and role of Prochlorococcus and its clades in broader marine microbial communities through changes in cell division and carbon fate

  20. Phytoplankton response to whole lake inorganic N fertilization along a gradient in dissolved organic carbon.

    PubMed

    Deininger, A; Faithfull, C L; Bergström, A-K

    2017-04-01

    Global change has increased inorganic nitrogen (N) and dissolved organic carbon (DOC; i.e., "browning") inputs to northern hemisphere boreal lakes. However, we do not know how phytoplankton in nutrient poor lake ecosystems of different DOC concentration respond to increased N availability. Here, we monitored changes in phytoplankton production, biomass and community composition in response to whole lake inorganic N fertilization in six boreal unproductive Swedish lakes divided into three lake pairs (control, N enriched) at three DOC levels (low, medium, high), with one reference year (2011) and 2 impact yr (2012, 2013). We found that phytoplankton biomass and production decreased with DOC concentration before N fertilization. Further, phytoplankton community composition also differed with respect to DOC, with a dominance of non-flagellated autotrophs at low DOC towards an increasing dominance of flagellated autotrophs with increased lake DOC concentration. The N fertilization increased phytoplankton biomass and production in all lakes, but did not affect phytoplankton community composition. However, the net response in biomass and production to N fertilization declined with increasing DOC, implying that the lake DOC concentration is critical in order to infer phytoplankton responses to N fertilization, and that the system switches from being primarily nutrient limited to becoming increasingly light limited with increased DOC concentration. In conclusion, our results show that browning will reduce phytoplankton production and biomass and influence phytoplankton community composition, whereas increased inorganic N loadings from deposition, forestry or other land use will primarily enhance phytoplankton biomass and production. Together, any change in the landscape that enhances inorganic N availability will increase phytoplankton production and biomass, but the positive effects of N will be much weaker or even neutralized in browner lakes as caused by light limitation.

  1. Biological uptake of polychlorinated biphenyls by Macoma balthica from sediment amended with activated carbon.

    PubMed

    McLeod, Pamela B; van den Heuvel-Greve, Martine J; Luoma, Samuel N; Luthy, Richard G

    2007-05-01

    This work characterizes the efficacy of activated carbon amendment in reducing polychlorinated biphenyl (PCB) bioavailability to clams (Macoma balthica) from field-contaminated sediment (Hunters Point Naval Shipyard, San Francisco Bay, CA, USA). Test methods were developed for the use of clams to investigate the effects of sediment amendment on biological uptake. Sediment was mixed with activated carbon for one month. Bioaccumulation tests (28 d) were employed to assess the relationships between carbon dose and carbon particle size on observed reductions in clam biological uptake of PCBs. Extraction and cleanup protocols were developed for the clam tissue. Efficacy of activated carbon treatment was found to increase with both increasing carbon dose and decreasing carbon particle size. Average reductions in bioaccumulation of 22, 64, and 84% relative to untreated Hunters Point sediment were observed for carbon amendments of 0.34, 1.7, and 3.4%, respectively. Average bioaccumulation reductions of 41, 73, and 89% were observed for amendments (dose = 1.7% dry wt) with carbon particles of 180 to 250, 75 to 180, and 25 to 75 microm, respectively, in diameter, indicating kinetic phenomena in these tests. Additionally, a biodynamic model quantifying clam PCB uptake from water and sediment as well as loss through elimination provided a good fit of experimental data. Model predictions suggest that the sediment ingestion route contributed 80 to 95% of the PCB burdens in the clams.

  2. Biological uptake of polychlorinated biphenyls by Macoma balthica from sediment amended with activated carbon

    USGS Publications Warehouse

    McLeod, Pamela B.; van den Heuvel-Greve, Martine J.; Luoma, S.N.; Luthy, R.G.

    2007-01-01

    This work characterizes the efficacy of activated carbon amendment in reducing polychlorinated biphenyl (PCB) bioavailability to clams (Macoma balthica) from field-contaminated sediment (Hunters Point Naval Shipyard, San Francisco Bay, CA, USA) Test methods were developed for the use of clams to investigate the effects of sediment amendment on biological uptake. Sediment was mixed with activated carbon for one month. Bioaccumulation tests (28 d) were employed to assess the relationships between carbon dose and carbon particle size on observed reductions in clam biological uptake of PCBs. Extraction and cleanup protocols were developed for the clam tissue. Efficacy of activated carbon treatment was found to increase with both increasing carbon dose and decreasing carbon particle size. Average reductions in bioaccumulation of 22, 64, and 84% relative to untreated Hunters Point sediment were observed for carbon amendments of 0.34, 1.7, and 3.4%, respectively. Average bioaccumulation reductions of 41, 73, and 89% were observed for amendments (dose = 1.7% dry wt) with carbon particles of 180 to 250, 75 to 180, and 25 to 75 ??m, respectively, in diameter, indicating kinetic phenomena in these tests. Additionally, a biodynamic model quantifying clam PCB uptake from water and sediment as well as loss through elimination provided a good fit of experimental data. Model predictions suggest that the sediment ingestion route contributed 80 to 95% of the PCB burdens in the clams. ?? 2007 SETAC.

  3. Photosynthetic use of inorganic carbon in deep-water kelps from the Strait of Gibraltar.

    PubMed

    García-Sánchez, María Jesús; Delgado-Huertas, Antonio; Fernández, José Antonio; Flores-Moya, Antonio

    2016-03-01

    Mechanisms of inorganic carbon assimilation were investigated in the four deep-water kelps inhabiting sea bottoms at the Strait of Gibraltar; these species are distributed at different depths (Saccorhiza polysiches at shallower waters, followed by Laminaria ochroleuca, then Phyllariopsis brevipes and, at the deepest bottoms, Phyllariopsis purpurascens). To elucidate the capacity to use HCO3(-) as a source of inorganic carbon for photosynthesis in the kelps, different experimental approaches were used. Specifically, we measured the irradiance-saturated gross photosynthetic rate versus pH at a constant dissolved inorganic carbon (DIC) concentration of 2 mM, the irradiance-saturated apparent photosynthesis (APS) rate versus DIC, the total and the extracellular carbonic anhydrase (CAext), the observed and the theoretical photosynthetic rates supported by the spontaneous dehydration of HCO3(-) to CO2, and the δ(13)C signature in tissues of the algae. While S. polyschides and L. ochroleuca showed photosynthetic activity at pH 9.5 (around 1.0 µmol O2 m(-2) s(-1)), the activity was close to zero in both species of Phyllariopsis. The APS versus DIC was almost saturated for the DIC values of natural seawater (2 mM) in S. polyschides and L. ochroleuca, but the relationship was linear in P. brevipes and P. purpurascens. The four species showed total and CAext activities but the inhibition of the CAext originated the observed photosynthetic rates at pH 8.0 to be similar to the theoretical rates that could be supported by the spontaneous dehydration of HCO3(-). The isotopic (13)C signatures ranged from -17.40 ± 1.81 to -21.11 ± 1.73 ‰ in the four species. Additionally, the δ(13)C signature was also measured in the deep-water Laminaria rodriguezii growing at 60-80 m, showing even a more negative value of -26.49 ± 1.25 ‰. All these results suggest that the four kelps can use HCO3(-) as external carbon source for photosynthesis mainly by the action of external CAext, but

  4. Uptake and Loss of Carbon Dioxide in Volumetric Analysis.

    ERIC Educational Resources Information Center

    Macca, Carlo

    1986-01-01

    Discusses the use of ratio diagrams, which plot the calculations of equilibrium concentrations of the species of the carbonate system. Provides examples to describe how these diagrams can be used to illustrate the behavior systems of interest in volumetric analysis, where absorption or loss of carbon dioxide takes place. (TW)

  5. Inorganic carbon cycling and biogeochemical processes in an Arctic inland sea (Hudson Bay)

    NASA Astrophysics Data System (ADS)

    Burt, William J.; Thomas, Helmuth; Miller, Lisa A.; Granskog, Mats A.; Papakyriakou, Tim N.; Pengelly, Leah

    2016-08-01

    The distributions of carbonate system parameters in Hudson Bay, which not only receives nearly one-third of Canada's river discharge but is also subject to annual cycles of sea-ice formation and melt, indicate that the timing and magnitude of freshwater inputs play an important role in carbon biogeochemistry and acidification in this unique Arctic ecosystem. This study uses basin-wide measurements of dissolved inorganic carbon (DIC) and total alkalinity (TA), as well as stable isotope tracers (δ18O and δ13CDIC), to provide a detailed assessment of carbon cycling processes within the bay. Surface distributions of carbonate parameters reveal the particular importance of freshwater inputs in the southern portion of the bay. Based on TA, we surmise that the deep waters in the Hudson Bay are largely of Pacific origin. Riverine TA end-members vary significantly both regionally and with small changes in near-surface depths, highlighting the importance of careful surface water sampling in highly stratified waters. In an along-shore transect, large increases in subsurface DIC are accompanied by equivalent decreases in δ13CDIC with no discernable change in TA, indicating a respiratory DIC production on the order of 100 µmol kg-1 DIC during deep water circulation around the bay.

  6. Early snowmelt decreases ablation period carbon uptake in a high elevation, subalpine forest, Niwot Ridge, Colorado, USA

    NASA Astrophysics Data System (ADS)

    Winchell, T. S.; Molotch, N. P.; Barnard, D. M.

    2015-12-01

    The snow ablation period is a time of great potential for carbon uptake in high-elevation, subalpine forests. During this period, water availability associated with snowmelt promotes photosynthetic carbon uptake, while snow cover diminishes carbon losses from soil respiration. Although the ablation period can be as short as two weeks, as much as 30% of the total seasonal carbon uptake can occur during this period. Varying ablation period dynamics, however, can result in varying rates of carbon uptake during this integral uptake period. We use fifteen years of observational climate flux and snow water equivalent (SWE) data for a subalpine forest in the Colorado Rocky Mountains to analyze carbon uptake trends during the annual ablation period. Specifically, we focus on how the timing of peak SWE affects carbon uptake during the ablation period. We find that when the snowmelt period occurs one month earlier than average, the forest experiences an ablation period mean air temperature of 2.7° C, approximately 5° C colder than an ablation period that occurs one month later than average. This early, colder atmospheric condition leads to daytime carbon uptake rates that are 2.5 gC/m2/day less than the later, warmer period, which results in 47 gC/m2 less ablation period carbon uptake. As most climate models project peak SWE to occur earlier under various warming scenarios, we can expect to see a trend of less carbon uptake during future ablation periods. We expect to see a decrease in total growing season carbon uptake if the post-snowmelt period is unable to compensate for the decrease in ablation period carbon uptake.

  7. Combining multiple ecosystem productivity measurements to constrain carbon uptake estimates in semiarid grasslands and shrublands

    NASA Astrophysics Data System (ADS)

    Maurer, G. E.; Krofcheck, D. J.; Collins, S. L.; Litvak, M. E.

    2016-12-01

    Recent observational and modeling studies have indicated that semiarid ecosystems are more dynamic contributors to the global carbon budget than once thought. Semiarid carbon fluxes, however, are generally small, with high interannual and spatial variability, which suggests that validating their global significance may depend on examining multiple productivity measures and their associated uncertainties and inconsistencies. We examined ecosystem productivity from eddy covariance (NEE), harvest (NPP), and terrestrial biome models (NEPm) at two very similar grassland sites and one creosote shrubland site in the Sevilleta National Wildlife Refuge of central New Mexico, USA. Our goal was to assess site and methodological correspondence in annual carbon uptake, patterns of interannual variability, and measurement uncertainty. One grassland site was a perennial carbon source losing 30 g C m-2 per year on average, while the other two sites were carbon sources or sinks depending on the year, with average net uptake of 5 and 25 g C m-2 per year at the grassland and shrubland site, respectively. Uncertainty values for cumulative annual NEE overlapped between the three sites in most years. When combined, aboveground and belowground annual NPP measurements were 15% higher than annual NEE values and did not confirm a loss of carbon at any site in any year. Despite differences in mean site carbon balance, year-to-year changes in cumulative annual NEE and NPP were similar at all sites with years 2010 and 2013 being favorable for carbon uptake and 2011 and 2012 being unfavorable at all sites. Modeled NEPm data for a number of nearby grid cells reproduced only a fraction of the observed range in carbon uptake and its interannual variability. These three sites are highly similar in location and climate and multiple carbon flux measurements confirm the high interannual variability in carbon flux. The exact magnitude of these fluxes, however, remains difficult to discern.

  8. Adaptation by macrophytes to inorganic carbon down a river with naturally variable concentrations of CO2.

    PubMed

    Maberly, S C; Berthelot, S A; Stott, A W; Gontero, B

    2015-01-01

    The productivity and ecological distribution of freshwater plants can be controlled by the availability of inorganic carbon in water despite the existence of different mechanisms to ameliorate this, such as the ability to use bicarbonate. Here we took advantage of a short, natural gradient of CO2 concentration, against a background of very high and relatively constant concentration of bicarbonate, in a spring-fed river, to study the effect of variable concentration of CO2 on the ability of freshwater plants to use bicarbonate. Plants close to the source, where the concentration of CO2 was up to 24 times air equilibrium, were dominated by Berula erecta. pH-drift results and discrimination against (13)C were consistent with this and the other species being restricted to CO2 and unable to use the high concentration of bicarbonate. There was some indication from stable (13)C data that B. erecta may have had access to atmospheric CO2 at low water levels. In contrast, species downstream, where concentrations of CO2 were only about 5 times air-equilibrium were almost exclusively able to use bicarbonate, based on pH-drift results. Discrimination against (13)C was also consistent with bicarbonate being the main source of inorganic carbon for photosynthesis in these species. There was, therefore, a transect downstream from the source of increasing ability to use bicarbonate that closely matched the decreasing concentration of CO2. This was produced largely by altered species composition, but partly by phenotypic changes in individual species.

  9. Inorganic carbon distribution and CO2 fluxes in a large European estuary (Tagus, Portugal).

    PubMed

    Oliveira, A P; Cabeçadas, G; Mateus, M D

    2017-08-07

    Ten field cruises were carried out in Tagus estuary from 1999 to 2007 to study the dynamics of the inorganic carbon system. Dissolved inorganic carbon (DIC) and total alkalinity (TA) increased with salinity. DIC and TA were generally conservative in the estuarine mixing zone (salinity > 10), while a complex distribution pattern was observed at the upper estuary. DIC values peaked 1786.9 ± 155.8 µmol kg(-1) at that segment. Estimated annual mean fluxes of DIC were 0.27 Tg C yr(-1) from the river to the estuary, and 0.37 Tg C yr(-1) from here to the coastal area. The Tagus estuary was always CO2 supersaturated, with partial pressure of CO2 (pCO2) reaching 9160 µatm in the upper estuary. An average emission of 0.11 Tg C yr(-1) was estimated from the estuary to the atmosphere, corresponding to 23% of exported DIC. Only 8% of the riverine DIC was ventilated. The non-conservative behaviour of CO2 parameters in the estuary segment under freshwater influence was attributed to alternations in the relevance of riverine/terrestrial runoff, photosynthesis, aerobic respiration, organic matter mineralization and CaCO3 precipitation/dissolution.

  10. The signature of the 13C/12C of dissolved inorganic carbon in the Strait of Gibraltar: a mixing case

    NASA Astrophysics Data System (ADS)

    Huertas, E.; Flecha, S.; Navarro, G.; Ruiz, J.; Stutsman, J.; Quay, P.

    2012-12-01

    The Strait of Gibraltar is a narrow and shallow channel that connects the Mediterranean Sea with the Atlantic Ocean. Previous studies have revealed that the water exchange pattern through the Strait plays an important role in the biogeochemical budgets of the Mediterranean and the North Atlantic. In particular, carbon fluxes in this area significantly contribute to the total carbon inventory of the North Atlantic, as the entrance of surface young Atlantic anthropogenic CO2 (CANT) rich waters into the Mediterranean through the Strait alleviates the accumulation of CANT in the former (Flecha et al., 2012). Recently, a carbon budget in the Strait was released, which shows the transport of the different species of carbon between the two water masses that encounter in this region (Huertas et al., 2009). However, the 13C/12C ratio (expressed as δ13C) of the total dissolved inorganic carbon (DIC) contained in both water types, which is a useful tracer of CO2 derived from fossil fuel and deforestation sources, had not been examined up to date. This work presents the first δ13C measurements in the Strait of Gibraltar using data collected in two oceanographic campaigns conducted in November 2011 and February 2012. The δ13C of the DIC was measured using the procedures described in Quay et al., (2003). Results obtained were also compared with other biogeochemical parameters recorded in the area, such as the apparent oxygen utilization (AOU) and nutrients. The spatial distribution of δ13C indicates that the Atlantic inflow (AI), as expected, presents higher values (maximum of 1.06 ‰) of the tracer in relation to the Mediterranean outflow (MOW) (minimum of 0.5 ‰) due to the enhanced biological activity in surface waters. This pattern leads to a net vertical δ13C loss equivalent to -19 ‰ in the water column. In addition, the relationship between AOU and δ13C reflects that the deep MOW is strongly influenced by the remineralization of organic matter that occurs in the

  11. Modeling the effects of organic nitrogen uptake by plants on the carbon cycling of boreal ecosystems

    NASA Astrophysics Data System (ADS)

    Zhu, Q.; Zhuang, Q.

    2013-08-01

    Boreal forest and tundra are the major ecosystems in the northern high latitudes in which a large amount of carbon is stored. These ecosystems are nitrogen-limited due to slow mineralization rate of the soil organic nitrogen. Recently, abundant field studies have found that organic nitrogen is another important nitrogen supply for boreal ecosystems. In this study, we incorporated a mechanism that allowed boreal plants to uptake small molecular amino acids into a process-based biogeochemical model, the Terrestrial Ecosystem Model (TEM), to evaluate the impact of organic nitrogen uptake on ecosystem carbon cycling. The new version of the model was evaluated at both boreal forest and tundra sites. We found that the modeled organic nitrogen uptake accounted for 36-87% of total nitrogen uptake by plants in tundra ecosystems and 26-50% for boreal forests, suggesting that tundra ecosystem might have more relied on the organic form of nitrogen than boreal forests. The simulated monthly gross ecosystem production (GPP) and net ecosystem production (NEP) tended to be larger with the new version of the model since the plant uptake of organic nitrogen alleviated the soil nitrogen limitation especially during the growing season. The sensitivity study indicated that the most important factors controlling the plant uptake of organic nitrogen were the maximum root uptake rate (Imax) and the radius of the root (r0) in our model. The model uncertainty due to uncertain parameters associated with organic nitrogen uptake at tundra ecosystem was larger than at boreal forest ecosystems. This study suggests that considering the organic nitrogen uptake by plants is important to boreal ecosystem carbon modeling.

  12. Inorganic phosphorus fertilizer ameliorates maize growth by reducing metal uptake, improving soil enzyme activity and microbial community structure.

    PubMed

    Wu, Wencheng; Wu, Jiahui; Liu, Xiaowen; Chen, Xianbin; Wu, Yingxin; Yu, Shixiao

    2017-09-01

    Recently, several studies have showed that both organic and inorganic fertilizers are effective in immobilizing heavy metals at low cost, in comparison to other remediation strategies for heavy metal-contaminated farmlands. A pot trial was conducted in this study to examine the effects of inorganic P fertilizer and organic fertilizer, in single application or in combination, on growth of maize, heavy metal availabilities, enzyme activities, and microbial community structure in metal-contaminated soils from an electronic waste recycling region. Results showed that biomass of maize shoot and root from the inorganic P fertilizer treatments were respectively 17.8 and 10.0 folds higher than the un-amended treatments (CK), while the biomass in the organic fertilizer treatments was only comparable to the CK. In addition, there were decreases of 85.0% in Cd, 74.3% in Pb, 66.3% in Cu, and 91.9% in Zn concentrations in the roots of maize grown in inorganic P fertilizer amended soil. Consistently, urease and catalase activities in the inorganic P fertilizer amended soil were 3.3 and 2.0 times higher than the CK, whereas no enhancement was observed in the organic fertilizer amended soil. Moreover, microbial community structure was improved by the application of inorganic P fertilizer, but not by organic fertilizer; the beneficial microbial groups such as Kaistobacter and Koribacter were most frequently detected in the inorganic P fertilizer amended soil. The negligible effect from the organic fertilizer might be ascribed to the decreased pH value in soils. The results suggest that the application of inorganic P fertilizer (or in combination with organic fertilizer) might be a promising strategy for the remediation of heavy metals contaminated soils in electronic waste recycling region. Copyright © 2017. Published by Elsevier Inc.

  13. Forest carbon uptake in North America's aging temperate deciduous forests: A data-theory-model mismatch?

    NASA Astrophysics Data System (ADS)

    Gough, C. M.; Curtis, P.; Bond-Lamberty, B. P.; Hardiman, B. S.; Scheuermann, C. M.; Nave, L. E.; Nadelhoffer, K. J.

    2015-12-01

    Century-old temperate deciduous forests in the US upper Midwest and Northeast power much of North America's terrestrial carbon sink, but these forests' carbon uptake capacity is expected to soon decline. But will this really happen? We marshal empirical data and ecological theory to show that declines in carbon uptake are not imminent in regrown temperate deciduous forests during coming decades, despite long-held assumptions and modeling results that predict declining carbon uptake during middle stages of ecosystem development. Age and production data for temperate deciduous forests, synthesized from published literature, do not provide evidence for declining net primary and ecosystem production (NPP and NEP, respectively) within the age-range most regional forests will occupy over the next half-century. Ecological theory suggests a mechanism for sustained carbon uptake in the region's aging forests in which high-frequency, low-severity disturbances maintain NPP and NEP by increasing ecosystem complexity. This theoretical model is supported by observations from the Forest Accelerated Succession Experiment in Michigan, USA, but such mechanisms sustaining production in old forests are not broadly represented in ecosystem models. Ecosystems experiencing low-frequency, high-severity disturbances that simplify ecosystem complexity do exhibit declining production during middle stages of succession, but we suggest that such scenarios have exerted a disproportionate influence on prevailing modeling and ecological assumptions regarding age-related declines in forest production. We conclude that there is wide ecological space for forests to sustain high rates of carbon uptake during middle stages of ecosystem development, and that advancing mechanistic understanding of long-term forest carbon cycle dynamics is essential to modeling the continent's future carbon sink strength.

  14. Dissolved inorganic carbon isotopic composition of the Gulf of Mexico deep-water masses.

    NASA Astrophysics Data System (ADS)

    Quintanilla-Terminel, J. G.; Herguera, J. C.; Ferreira-Bartrina, V.; Hernández-Ayón, J. M.; Camacho-Ibar, V.

    2014-12-01

    This study provides new data for the establishment of a carbon biogeochemical dynamics baseline in the deep Gulf of Mexico (GM) based on carbon isotopes in dissolved inorganic carbon. Water samples from 40 deep-water stations south of 25˚N were collected during XIXIMI-2 cruise, July 2011, aboard BO/Justo Sierra. Vertical profiles of temperature, salinity and dissolved oxygen (DO) were further measured in each station. In the Stable Isotopes Laboratory at CICESE we determined the carbon isotopic composition of the dissolved inorganic carbon (DIC) (δ13CDIC). Remarkably, density, DO and δ13CCID profiles showed a clear difference between the Loop current and the deep-waters of the GM south of 25˚N. We found the following average δ13CCID values in the Loop current and in the deep-waters of the Gulf: subtropical underwater (SUW): 0.73±0.06‰ and 0.86±0.04‰; 18 degree water (18W): 0.76 ± 0.08‰ and 0.58± 0.06‰; North Atlantic central water (NACW): 0.77 ± 0.05‰ and 0.71 ± 0.09‰; South Atlantic central water (SACW): 0.80 ± 0.08‰ and 0.77 ± 0.07‰; Antartic intermediate water (AAIW): 1.00 ± 0.06‰ and 0.90 ± 0.08‰; North Atlantic deep water (NADW): 1.03 ± 0.06‰ and 1.01 ± 0.10‰. We will discuss how the biological component, δ13CCID-BIO, of subsurface water masses match very closely the apparent oxygen utilization relation described by Kroopnick, 1985, with the exception of SUW, and as a consequence the 18W is probably the water mass most affected by organic carbon remineralization processes in the GM south of 25˚N. We further show how these waters seem to store a larger proportion of anthropogenic carbon than the deeper water masses.

  15. Inorganic carbon fluxes across the vadose zone of planted and unplanted soil mesocosms

    NASA Astrophysics Data System (ADS)

    Thaysen, E. M.; Jacques, D.; Jessen, S.; Andersen, C. E.; Laloy, E.; Ambus, P.; Postma, D.; Jakobsen, I.

    2014-03-01

    The efflux of carbon dioxide (CO2) from soils influences atmospheric CO2 concentrations and thereby climate change. The partitioning of inorganic carbon fluxes in the vadose zone between emission to the atmosphere and to the groundwater was investigated. Carbon dioxide partial pressure in the soil gas (pCO2), alkalinity, soil moisture and temperature were measured over depth and time in unplanted and planted (barley) mesocosms. The dissolved inorganic carbon (DIC) percolation flux was calculated from the pCO2, alkalinity and the water flux at the mesocosm bottom. Carbon dioxide exchange between the soil surface and the atmosphere was measured at regular intervals. The soil diffusivity was determined from soil radon-222 (222Rn) emanation rates and soil air Rn concentration profiles, and was used in conjunction with measured pCO2 gradients to calculate the soil CO2 production. Carbon dioxide fluxes were modelled using the HP1 module of the Hydrus 1-D software. The average CO2 effluxes to the atmosphere from unplanted and planted mesocosm ecosystems during 78 days of experiment were 0.1 ± 0.07 and 4.9 ± 0.07 μmol carbon (C) m-2 s-1, respectively, and largely exceeded the corresponding DIC percolation fluxes of 0.01 ± 0.004 and 0.06 ± 0.03 μmol C m-2 s-1. Post-harvest soil respiration (Rs) was only 10% of the Rs during plant growth, while the post-harvest DIC percolation flux was more than one third of the flux during growth. The Rs was controlled by production and diffusivity of CO2 in the soil. The DIC percolation flux was largely controlled by the pCO2 and the drainage flux due to low solution pH. Plant biomass and soil pCO2 were high in the mesocosms as compared to a standard field situation. Our results indicate no change of the cropland C balance under elevated atmospheric CO2 in a warmer future climate, in which plant biomass and soil pCO2 are expected to increase.

  16. B/Ca in coccoliths and relationship to calcification vesicle pH and dissolved inorganic carbon concentrations

    NASA Astrophysics Data System (ADS)

    Stoll, Heather; Langer, Gerald; Shimizu, Nobumichi; Kanamaru, Kinuyo

    2012-03-01

    Coccolithophorid algae are microscopic but prolific calcifiers in modern and ancient oceans. When the pH of seawater is modified, as may occur in the future due to ocean acidification, different species and strains of coccolithophorids have exhibited diverse calcification responses in laboratory culture. Since their biomineralization is a completely intracellular process, it is unclear why their response should be affected by extracellular seawater pH. Variations in the B/Ca in coccoliths are potential indicators of pH shifts in the intracellular coccolith vesicle where calcification occurs, because B/Ca in abiogenic calcites increases at higher pH due to the greater abundance of borate ions, the only B species incorporated into calcite. We used a SIMS ion probe to measure B/Ca of coccoliths from three different strains of Emiliania huxleyi and one strain of Coccolithus braarudii braarudii cultured under different seawater pH conditions to ascertain if the B/Ca can be used to elucidate how coccolithophorids respond to changing ocean pH. These data are interpreted with the aid of a conceptual model of cellular boron acquisition by coccolithophorids. Based on uptake in other plants, we infer that boron uptake by coccolithophorid cells is dominated by passive uptake of boric acid across the lipid bilayer. Subsequently, in the alkaline coccolith vesicle (C.V.), boron speciates according to the C.V. pH, and borate is incorporated into the coccolith. At increasing seawater pH, the relative abundance of the neutral boric acid in seawater decreases, lowering the potential B flux into the cell. Homeostasis or constant pH of the coccolith vesicle results in a decrease of the B/Ca in the coccolith with increasing seawater pH. In contrast, if coccolith vesicle pH increases with increasing seawater pH, then the B/Ca will increase as the fraction of borate in the coccolith vesicle increases. The coccolith B/Ca is also expected to depend inversely on the dissolved inorganic

  17. Optimization of inorganic carbon sources to improve the carbon fixation efficiency of the non-photosynthetic microbial community with different electron donors.

    PubMed

    Wang, Ya-nan; Wang, Lei; Shan, Yi-na; Hu, Jiajun; Tsang, Yiufai; Hu, Yu; Fu, Xiaohua; Le, Yiquan

    2015-01-01

    As the non-photosynthetic microbial community (NPMC) isolated from seawaters utilized inorganic carbon sources for carbon fixation, the concentrations and ratios of Na2CO3, NaHCO3, and CO2 were optimized by response surface methodology design. With H2 as the electron donor, the optimal carbon sources were 270 mg/L Na2CO3, 580 mg/L NaHCO3, and 120 mg/L CO2. The carbon fixation efficiency in response to total organic carbon (TOC) was up to 30.59 mg/L with optimal carbon sources, which was about 50% higher than that obtained with CO2 as the sole carbon source. The mixture of inorganic carbon sources developed a buffer system to prevent acidification or alkalization of the medium caused by CO2 or Na2CO3, respectively. Furthermore, CO2 and HCO3(-), the starting points of carbon fixation in the pathways of Calvin-Benson-Bassham and 3-hydroxypropionate cycles, were provided by the carbon source structure to facilitate carbon fixation by NPMC. However, in the presence of mixed electron donors composed of 1.25% Na2S, 0.50% Na2S2O3, and 0.457% NaNO2, the carbon source structure did not exhibit significant improvement in the carbon fixation efficiency, when compared with that achieved with CO2 as the sole carbon source. The positive effect of mixed electron donors on inorganic carbon fixation was much higher than that of the carbon source structure. Nevertheless, the carbon source structure could be used as an alternative to CO2 when using NPMC to fix carbon in industrial processes.

  18. Determination of the origin of dissolved inorganic carbon in groundwater around a reclaimed landfill in Otwock using stable carbon isotopes.

    PubMed

    Porowska, Dorota

    2015-05-01

    Chemical and isotopic analyses of groundwater from piezometers located around a reclaimed landfill in Otwock (Poland) were performed in order to trace the origin of dissolved inorganic carbon (DIC) in the groundwater. Due to differences in the isotopic composition of carbon from different sources, an analysis of stable carbon isotopes in the groundwater, together with the Keeling plot approach and a two-component mixing model allow us to evaluate the relative contributions of carbon from these sources in the groundwater. In the natural (background) groundwater, DIC concentrations and the isotopic composition of DIC (δ(13)CDIC) comes from two sources: decomposition of organic matter and carbonate dissolution within the aquifer sediments, whereas in the leachate-contaminated groundwater, DIC concentrations and δ(13)CDIC values depend on the degradation of organic matter within the aquifer sediments and biodegradation of organic matter stored in the landfill. From the mixing model, about 4-54% of the DIC pool is derived from organic matter degradation and 96-46% from carbonate dissolution in natural conditions. In the leachate-contaminated groundwater, about 20-53% of the DIC is derived from organic matter degradation of natural origin and 80-47% from biodegradation of organic matter stored in the landfill. Partial pressure of CO2 (P CO2) was generally above the atmospheric, hence atmospheric CO2 as a source of carbon in DIC pool was negligible in the aquifer. P CO2 values in the aquifer in Otwock were always one to two orders of magnitude above the atmospheric P CO2, and thus CO2 escaped directly into the vadose zone.

  19. Dynamics of soil organic and inorganic carbon in the cropland of upper Yellow River Delta, China

    NASA Astrophysics Data System (ADS)

    Guo, Yang; Wang, Xiujun; Li, Xianglan; Wang, Jiaping; Xu, Minggang; Li, Dongwei

    2016-10-01

    Soil inorganic carbon (SIC) and organic carbon (SOC) are important carbon reservoirs in terrestrial ecosystems. However, little attention was paid to SIC dynamics in cropland. We conducted a survey in the upper Yellow River Delta of North China Plain. We collected 155 soil samples from 31 profiles, and measured SOC, SIC and soluble Ca2+ and Mg2+ contents. Our results showed that mean SOC content decreased from 9.30 g kg‑1 near the surface to 2.36 g kg‑1 in 80–100 cm whereas mean SIC content increased from 10.48 to 12.72 g kg‑1. On average, SOC and SIC stocks over 0–100 cm were 5.73 kg C m‑2 and 16.89 kg C m‑2, respectively. There was a significantly positive correlation (r = 0.88, P < 0.001) between SOC and SIC in the cropland. We also found that SIC had a significantly positive correlation with both soluble Ca2+ (r = 0.57, P < 0.01) and Mg2+ (r = 0.43, P < 0.05). Our study suggested that increasing SOC might lead to an increase in SIC stocks in the cropland of North China Plain. This study highlights the importance of SIC in the carbon cycle of China’s semi-arid region.

  20. Determination of the δ13C of dissolved inorganic carbon in water; RSIL lab code 1710

    USGS Publications Warehouse

    Singleton, Glenda L.; Revesz, Kinga; Coplen, Tyler B.

    2012-01-01

    The purpose of the Reston Stable Isotope Laboratory (RSIL) lab code 1710 is to present a method to determine the δ13C of dissolved inorganic carbon (DIC) of water. The DIC of water is precipitated using ammoniacal strontium chloride (SrCl2) solution to form strontium carbonate (SrCO3). The δ13C is analyzed by reacting SrCO3 with 100-percent phosphoric acid (H3PO4) to liberate carbon quantitatively as carbon dioxide (CO2), which is collected, purified by vacuum sublimation, and analyzed by dual inlet isotope-ratio mass spectrometry (DI-IRMS). The DI-IRMS is a DuPont double-focusing mass spectrometer. One ion beam passes through a slit in a forward collector and is collected in the rear collector. The other measurable ion beams are collected in the front collector. By changing the ion-accelerating voltage under computer control, the instrument is capable of measuring mass/charge (m/z) 45 or 46 in the rear collector and m/z 44 and 46 or 44 and 45, respectively, in the front collector. The ion beams from these m/z values are as follows: m/z 44 = CO2 = 12C16O16O, m/z 45 = CO2 = 13C16O16O primarily, and m/z 46 = CO2 = 12C16O18O primarily. The data acquisition and control software calculates δ13C values.

  1. Dynamics of soil organic and inorganic carbon in the cropland of upper Yellow River Delta, China

    PubMed Central

    Guo, Yang; Wang, Xiujun; Li, Xianglan; Wang, Jiaping; Xu, Minggang; Li, Dongwei

    2016-01-01

    Soil inorganic carbon (SIC) and organic carbon (SOC) are important carbon reservoirs in terrestrial ecosystems. However, little attention was paid to SIC dynamics in cropland. We conducted a survey in the upper Yellow River Delta of North China Plain. We collected 155 soil samples from 31 profiles, and measured SOC, SIC and soluble Ca2+ and Mg2+ contents. Our results showed that mean SOC content decreased from 9.30 g kg−1 near the surface to 2.36 g kg−1 in 80–100 cm whereas mean SIC content increased from 10.48 to 12.72 g kg−1. On average, SOC and SIC stocks over 0–100 cm were 5.73 kg C m−2 and 16.89 kg C m−2, respectively. There was a significantly positive correlation (r = 0.88, P < 0.001) between SOC and SIC in the cropland. We also found that SIC had a significantly positive correlation with both soluble Ca2+ (r = 0.57, P < 0.01) and Mg2+ (r = 0.43, P < 0.05). Our study suggested that increasing SOC might lead to an increase in SIC stocks in the cropland of North China Plain. This study highlights the importance of SIC in the carbon cycle of China’s semi-arid region. PMID:27782204

  2. Tidal-induced inorganic carbon dynamics in the Strait of Gibraltar

    NASA Astrophysics Data System (ADS)

    de la Paz, Mercedes; Debelius, Bibiana; Macías, Diego; Vázquez, Agueda; Gómez-Parra, Abelardo; Forja, Jesus M.

    2008-08-01

    This study presents the distribution of dissolved inorganic carbon (DIC) along the Strait of Gibraltar, its tidal-induced variability, as well as the inorganic carbon exchange between the Atlantic Ocean and Mediterranean Sea. During November 2003, water column samples were collected at nine stations to measure total alkalinity (TA), pH, and dissolved oxygen (DO) for the spatial characterization of the carbonate system. At the same time, anchored samplings were carried out, above the Camarinal Sill and in the Eastern Section of the Strait, in order to assess the tidal mixing effects for oxygen and DIC distribution on the water column. Three distinct water masses can be discerned in this area: the Surface Atlantic Water (SAW), the Mediterranean Water (MW), and the less abundant North Atlantic Central Water (NACW). The observations show an increase in the DIC and a decrease in oxygen concentration with depth, related to the different physico-chemical features of each water mass. The results show the high time-dependence of the vertical distribution of DIC with the interface oscillation, affected by the intense mixing processes taking place in the Strait. Intense mixing episodes over the Camarinal Sill are responsible for an increase in the DIC concentrations in the upper layer of the Eastern Section of the Strait. Higher DIC concentrations in the Mediterranean than in the Atlantic waters are responsible for a net DIC transport of 1.47×10 12 mol C yr -1 to the Atlantic Ocean. Nevertheless, the net exchange is highly sensitive to the interface definition, as well as to the estimate of water volume transport used.

  3. Historical warming reduced due to enhanced land carbon uptake.

    PubMed

    Shevliakova, Elena; Stouffer, Ronald J; Malyshev, Sergey; Krasting, John P; Hurtt, George C; Pacala, Stephen W

    2013-10-15

    Previous studies have demonstrated the importance of enhanced vegetation growth under future elevated atmospheric CO2 for 21st century climate warming. Surprisingly no study has completed an analogous assessment for the historical period, during which emissions of greenhouse gases increased rapidly and land-use changes (LUC) dramatically altered terrestrial carbon sources and sinks. Using the Geophysical Fluid Dynamics Laboratory comprehensive Earth System Model ESM2G and a reconstruction of the LUC, we estimate that enhanced vegetation growth has lowered the historical atmospheric CO2 concentration by 85 ppm, avoiding an additional 0.31 ± 0.06 °C warming. We demonstrate that without enhanced vegetation growth the total residual terrestrial carbon flux (i.e., the net land flux minus LUC flux) would be a source of 65-82 Gt of carbon (GtC) to atmosphere instead of the historical residual carbon sink of 186-192 GtC, a carbon saving of 251-274 GtC.

  4. Historical warming reduced due to enhanced land carbon uptake

    PubMed Central

    Shevliakova, Elena; Stouffer, Ronald J.; Malyshev, Sergey; Krasting, John P.; Hurtt, George C.; Pacala, Stephen W.

    2013-01-01

    Previous studies have demonstrated the importance of enhanced vegetation growth under future elevated atmospheric CO2 for 21st century climate warming. Surprisingly no study has completed an analogous assessment for the historical period, during which emissions of greenhouse gases increased rapidly and land-use changes (LUC) dramatically altered terrestrial carbon sources and sinks. Using the Geophysical Fluid Dynamics Laboratory comprehensive Earth System Model ESM2G and a reconstruction of the LUC, we estimate that enhanced vegetation growth has lowered the historical atmospheric CO2 concentration by 85 ppm, avoiding an additional 0.31 ± 0.06 °C warming. We demonstrate that without enhanced vegetation growth the total residual terrestrial carbon flux (i.e., the net land flux minus LUC flux) would be a source of 65–82 Gt of carbon (GtC) to atmosphere instead of the historical residual carbon sink of 186–192 GtC, a carbon saving of 251–274 GtC. PMID:24062452

  5. Can frequent precipitation moderate the impact of drought on peatmoss carbon uptake in northern peatlands?

    PubMed

    Nijp, Jelmer J; Limpens, Juul; Metselaar, Klaas; van der Zee, Sjoerd E A T M; Berendse, Frank; Robroek, Bjorn J M

    2014-07-01

    Northern peatlands represent a large global carbon store that can potentially be destabilized by summer water table drawdown. Precipitation can moderate the negative impacts of water table drawdown by rewetting peatmoss (Sphagnum spp.), the ecosystem's key species. Yet, the frequency of such rewetting required for it to be effective remains unknown. We experimentally assessed the importance of precipitation frequency for Sphagnum water supply and carbon uptake during a stepwise decrease in water tables in a growth chamber. CO2 exchange and the water balance were measured for intact cores of three peatmoss species (Sphagnum majus, Sphagnum balticum and Sphagnum fuscum) representative of three hydrologically distinct peatland microhabitats (hollow, lawn and hummock) and expected to differ in their water table-precipitation relationships. Precipitation contributed significantly to peatmoss water supply when the water table was deep, demonstrating the importance of precipitation during drought. The ability to exploit transient resources was species-specific; S. fuscum carbon uptake increased linearly with precipitation frequency for deep water tables, whereas carbon uptake by S. balticum and S. majus was depressed at intermediate precipitation frequencies. Our results highlight an important role for precipitation in carbon uptake by peatmosses. Yet, the potential to moderate the impact of drought is species-specific and dependent on the temporal distribution of precipitation.

  6. Elevated CO2 maintains grassland net carbon uptake under a future heat and drought extreme.

    PubMed

    Roy, Jacques; Picon-Cochard, Catherine; Augusti, Angela; Benot, Marie-Lise; Thiery, Lionel; Darsonville, Olivier; Landais, Damien; Piel, Clément; Defossez, Marc; Devidal, Sébastien; Escape, Christophe; Ravel, Olivier; Fromin, Nathalie; Volaire, Florence; Milcu, Alexandru; Bahn, Michael; Soussana, Jean-François

    2016-05-31

    Extreme climatic events (ECEs) such as droughts and heat waves are predicted to increase in intensity and frequency and impact the terrestrial carbon balance. However, we lack direct experimental evidence of how the net carbon uptake of ecosystems is affected by ECEs under future elevated atmospheric CO2 concentrations (eCO2). Taking advantage of an advanced controlled environment facility for ecosystem research (Ecotron), we simulated eCO2 and extreme cooccurring heat and drought events as projected for the 2050s and analyzed their effects on the ecosystem-level carbon and water fluxes in a C3 grassland. Our results indicate that eCO2 not only slows down the decline of ecosystem carbon uptake during the ECE but also enhances its recovery after the ECE, as mediated by increases of root growth and plant nitrogen uptake induced by the ECE. These findings indicate that, in the predicted near future climate, eCO2 could mitigate the effects of extreme droughts and heat waves on ecosystem net carbon uptake.

  7. Elevated CO2 maintains grassland net carbon uptake under a future heat and drought extreme

    PubMed Central

    Roy, Jacques; Picon-Cochard, Catherine; Augusti, Angela; Benot, Marie-Lise; Thiery, Lionel; Darsonville, Olivier; Landais, Damien; Piel, Clément; Defossez, Marc; Devidal, Sébastien; Escape, Christophe; Ravel, Olivier; Fromin, Nathalie; Volaire, Florence; Milcu, Alexandru; Bahn, Michael; Soussana, Jean-François

    2016-01-01

    Extreme climatic events (ECEs) such as droughts and heat waves are predicted to increase in intensity and frequency and impact the terrestrial carbon balance. However, we lack direct experimental evidence of how the net carbon uptake of ecosystems is affected by ECEs under future elevated atmospheric CO2 concentrations (eCO2). Taking advantage of an advanced controlled environment facility for ecosystem research (Ecotron), we simulated eCO2 and extreme cooccurring heat and drought events as projected for the 2050s and analyzed their effects on the ecosystem-level carbon and water fluxes in a C3 grassland. Our results indicate that eCO2 not only slows down the decline of ecosystem carbon uptake during the ECE but also enhances its recovery after the ECE, as mediated by increases of root growth and plant nitrogen uptake induced by the ECE. These findings indicate that, in the predicted near future climate, eCO2 could mitigate the effects of extreme droughts and heat waves on ecosystem net carbon uptake. PMID:27185934

  8. Sudden increase in atmospheric CO2 concentration reveals strong coupling between shoot carbon uptake and root nutrient uptake in young walnut trees.

    PubMed

    Delaire, Mickaël; Frak, Ela; Sigogne, Monique; Adam, Boris; Beaujard, François; Le Roux, Xavier

    2005-02-01

    We studied the short-term (i.e., a few days) effect of a sudden increase in CO2 uptake by shoots on nutrient (NO3-, P ion, K+, Ca2+ and Mg2+) uptake by roots during vegetative growth of young walnut (Juglans nigra x J. major L.) trees. The increase in CO2 uptake was induced by a sudden increase in atmospheric CO2 concentration ([CO2]). Twelve 2-year-old trees were transplanted and grown in perlite-filled pots in a greenhouse. Rates of CO2 uptake and water loss by individual trees were determined by a branch bag method from 3 days before until 6 days after [CO2] was increased. Nutrient uptake rates were measured concurrently by a hydroponic recirculating nutrient solution system that provided non-limiting supplies of water and nutrients. Six control trees were kept in ambient [CO2] (360 ppm), and [CO2] was increased to 550 ppm for one set of three trees and to 800 ppm for another set of three trees. Before imposing the elevated [CO2] treatments, all trees exhibited similar daily water loss, CO2 uptake and nutrient uptake rates when expressed per unit leaf area to account for the tree size effect. Daily water loss rates were only slightly affected by elevated [CO2]. Carbon dioxide uptake rates greatly increased with increasing atmospheric [CO2], and nutrient uptake rates were proportional to CO2 uptake rates during the study period, except for P ion. Our results show that, despite the important carbon and nitrogen storage capacities previously observed in young walnut trees, nutrient uptake by roots is strongly coupled to carbon uptake by shoots over periods of a few days.

  9. Tracing source, mixing and uptaking processes of carbon in an epikarst spring-pond system in southeastern Guizhou of China by carbon isotopes (13C-14C)

    NASA Astrophysics Data System (ADS)

    Zhao, M.; Chen, B.; Liu, Z.; Li, H. C.; Yang, R.

    2015-12-01

    δ13C and Δ14C of dissolved inorganic carbon (DIC), particulate organic carbon (POC) and aquatic plants from a karst spring and two spring-fed ponds in Laqiao, Maolan County, Guizhou Province in January, July and October of 2013 were measured to understand the roles of aquatic photosynthesis through DIC uptake in karst surface waters. The mean Δ14C and δ13C values of DIC for the spring pool, midstream and downstream ponds are -60.6±26.3‰ and -13.53±1.97‰, -62.8±62.9‰ and -11.72±2.72‰, and -54.2±56.5‰ and -9.40±2.03‰, respectively. Both Δ14C and δ13C show seasonal variations, with lower Δ14C values but heavier δ13C values in dry season and vice versa in summer rainy season. This observation indicates that (1) the main carbon source of the spring DIC is from limestone bedrock dissolution and soil CO2 with higher contribution in summer due to higher productivity; and (2) 13C and 14C have different behaviors during DIC uptake by aquatic plants and during CO2 exchange between DIC and the atmospheric CO2. Biological uptake of CO2 will not affect the Δ14C of DIC, but lead to δ13CDIC enrichment. CO2 exchange between DIC and the atmospheric CO2 should elevate both the Δ14C and δ13C of DIC. In Laqiao spring-pond system, it seems that the effect of biological uptake on the Δ14C and δ13C of DIC is much stronger than that of CO2 exchange with the atmosphere. The mean Δ14C values of POC from the spring pool, midstream and downstream ponds are -308.1 ±64.3‰, -164.4±84.4‰ and -195.1±108.5‰, respectively, indicating mixture of aquatic algae and detrital particle (clay and dust). More aquatic algae were formed in the stream ponds especially in the summer. SEM results of the POC samples support this conclusion. Furthermore, the Δ14C values of the submerged aquatic plants range from -200.0‰ to -51.3 ‰ and were similar to those of the DIC, indicating that the aquatic plants used DIC for photosynthesis. The Δ14C value of an emergent plant

  10. Geochemistry of dissolved inorganic carbon in a Coastal Plain aquifer. 2. Modeling carbon sources, sinks, and δ13C evolution

    USGS Publications Warehouse

    McMahon, Peter B.; Chapelle, Francis H.

    1991-01-01

    Stable isotope data for dissolved inorganic carbon (DIC), carbonate shell material and cements, and microbial CO2 were combined with organic and inorganic chemical data from aquifer and confining-bed pore waters to construct geochemical reaction models along a flowpath in the Black Creek aquifer of South Carolina. Carbon-isotope fractionation between DIC and precipitating cements was treated as a Rayleigh distillation process. Organic matter oxidation was coupled to microbial fermentation and sulfate reduction. All reaction models reproduced the observed chemical and isotopic compositions of final waters. However, model 1, in which all sources of carbon and electron-acceptors were assumed to be internal to the aquifer, was invalidated owing to the large ratio of fermentation CO2 to respiration CO2 predicted by the model (5–49) compared with measured ratios (two or less). In model 2, this ratio was reduced by assuming that confining beds adjacent to the aquifer act as sources of dissolved organic carbon and sulfate. This assumption was based on measured high concentrations of dissolved organic acids and sulfate in confining-bed pore waters (60–100 μM and 100–380 μM, respectively) relative to aquifer pore waters (from less than 30 μM and 2–80 μM, respectively). Sodium was chosen as the companion ion to organic-acid and sulfate transport from confining beds because it is the predominant cation in confining-bed pore waters. As a result, excessive amounts of Na-for-Ca ion exchange and calcite precipitation (three to four times more cement than observed in the aquifer) were required by model 2 to achieve mass and isotope balance of final water. For this reason, model 2 was invalidated. Agreement between model-predicted and measured amounts of carbonate cement and ratios of fermentation CO2 to respiration CO2 were obtained in a reaction model that assumed confining beds act as sources of DIC, as well as organic acids and sulfate. This assumption was supported

  11. Geochemistry of dissolved inorganic carbon in a Coastal Plain aquifer. 2. Modeling carbon sources, sinks, and δ13C evolution

    USGS Publications Warehouse

    McMahon, Peter B.; Chapelle, Francis H.

    1991-01-01

    Stable isotope data for dissolved inorganic carbon (DIC), carbonate shell material and cements, and microbial CO2 were combined with organic and inorganic chemical data from aquifer and confining-bed pore waters to construct geochemical reaction models along a flowpath in the Black Creek aquifer of South Carolina. Carbon-isotope fractionation between DIC and precipitating cements was treated as a Rayleigh distillation process. Organic matter oxidation was coupled to microbial fermentation and sulfate reduction. All reaction models reproduced the observed chemical and isotopic compositions of final waters. However, model 1, in which all sources of carbon and electron-acceptors were assumed to be internal to the aquifer, was invalidated owing to the large ratio of fermentation CO2 to respiration CO2 predicted by the model (5–49) compared with measured ratios (two or less). In model 2, this ratio was reduced by assuming that confining beds adjacent to the aquifer act as sources of dissolved organic carbon and sulfate. This assumption was based on measured high concentrations of dissolved organic acids and sulfate in confining-bed pore waters (60–100 μM and 100–380 μM, respectively) relative to aquifer pore waters (from less than 30 μM and 2–80 μM, respectively). Sodium was chosen as the companion ion to organic-acid and sulfate transport from confining beds because it is the predominant cation in confining-bed pore waters. As a result, excessive amounts of Na-for-Ca ion exchange and calcite precipitation (three to four times more cement than observed in the aquifer) were required by model 2 to achieve mass and isotope balance of final water. For this reason, model 2 was invalidated. Agreement between model-predicted and measured amounts of carbonate cement and ratios of fermentation CO2 to respiration CO2 were obtained in a reaction model that assumed confining beds act as sources of DIC, as well as organic acids and sulfate. This assumption was

  12. Two decades of inorganic carbon dynamics along the Western Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Hauri, C.; Doney, S. C.; Takahashi, T.; Erickson, M.; Jiang, G.; Ducklow, H. W.

    2015-05-01

    We present 20 years of seawater inorganic carbon measurements collected along the western shelf and slope of the Antarctic Peninsula. Water column observations from summertime cruises and seasonal surface underway pCO2 measurements provide unique insights into the spatial, seasonal and interannual variability of the dynamic system. The discrete measurements from depths > 2000 m align well with World Ocean Circulation Experiment observations across the time-series and underline the consistency of the data set. Analysis shows large spatial gradients in surface alkalinity and dissolved inorganic carbon content, with a concomitant wide range of Ωarag from values < 1 up to 3.9. This spatial variability was mainly driven by increasing influence of biological productivity towards the southern end of the sampling grid and melt water input along the coast towards the northern end. Large inorganic carbon drawdown through biological production in summer caused high near-shore Ωarag despite glacial and sea-ice melt water input. In support of previous studies, we observed Redfield behavior of regional C / N nutrient utilization, while the C / P (80.5 ± 2.5) and N / P (11.7 ± 0.3) molar ratios were significantly lower than the Redfield elemental stoichiometric values. Seasonal predictions of Ωarag suggest that surface waters remained mostly supersaturated with regard to aragonite throughout the study. However, more than a third of the predictions for winters between 1999 and 2013 resulted in Ωarag < 1.3. Such low levels of Ωarag may have implications for important organisms such as pteropods. Despite large interannual variability, surface pCO2 measurements indicate a statistically significant increasing trend of up to 23 μatm per decade in fall and spring and a concomitant decreasing pH, pointing towards first signs of ocean acidification in the region. The combination of ongoing ocean acidification and freshwater input may soon provoke more unfavorable conditions than

  13. Inorganic and black carbon aerosols in the Los Angeles Basin during CalNex

    NASA Astrophysics Data System (ADS)

    Ensberg, J. J.; Craven, J. S.; Metcalf, A. R.; Allan, J. D.; Angevine, W. M.; Bahreini, R.; Brioude, J.; Cai, C.; Coe, H.; Gouw, J. A.; Ellis, R. A.; Flynn, J. H.; Haman, C. L.; Hayes, P. L.; Jimenez, J. L.; Lefer, B. L.; Middlebrook, A. M.; Murphy, J. G.; Neuman, J. A.; Nowak, J. B.; Roberts, J. M.; Stutz, J.; Taylor, J. W.; Veres, P. R.; Walker, J. M.; Seinfeld, J. H.

    2013-02-01

    We evaluate predictions from the Community Multiscale Air Quality (CMAQ version 4.7.1) model against a suite of airborne and ground-based meteorological measurements, gas- and aerosol-phase inorganic measurements, and black carbon (BC) measurements over Southern California during the CalNex field campaign in May/June 2010. Ground-based measurements are from the CalNex Pasadena ground site, and airborne measurements took place onboard the Center for Interdisciplinary Remotely-Piloted Aircraft Studies (CIRPAS) Navy Twin Otter and the NOAA WP-3D aircraft. BC predictions are in general agreement with observations at the Pasadena ground site and onboard the WP-3D, but are consistently overpredicted when compared to Twin Otter measurements. Adjustments to predicted inorganic mass concentrations, based on predicted aerosol size distributions and the AMS transmission efficiency, are shown to be significant. Owing to recent shipping emission reductions, the dominant source of sulfate in the L.A. Basin may now be long-range transport. Sensitivity studies suggest that severely underestimated ammonia emissions, and not the exclusion of crustal species (Ca2 +, K+, and Mg2 +), are the single largest contributor to measurement/model disagreement in the eastern part of the L.A. Basin. Despite overstated NOx emissions, total nitrate concentrations are underpredicted, which suggests a missing source of HNO3 and/or overprediction of deposition rates. Adding gas-phase NH3 measurements and size-resolved measurements, up to 10 μm, of nitrate and various cations (e.g. Na+, Ca2 +, K+) to routine monitoring stations in the L.A. Basin would greatly facilitate interpreting day-to-day fluctuations in fine and coarse inorganic aerosol.

  14. Nitrogen feedbacks increase future terrestrial ecosystem carbon uptake in an individual-based dynamic vegetation model

    NASA Astrophysics Data System (ADS)

    Wårlind, D.; Smith, B.; Hickler, T.; Arneth, A.

    2014-11-01

    Recently a considerable amount of effort has been put into quantifying how interactions of the carbon and nitrogen cycle affect future terrestrial carbon sinks. Dynamic vegetation models, representing the nitrogen cycle with varying degree of complexity, have shown diverging constraints of nitrogen dynamics on future carbon sequestration. In this study, we use LPJ-GUESS, a dynamic vegetation model employing a detailed individual- and patch-based representation of vegetation dynamics, to evaluate how population dynamics and resource competition between plant functional types, combined with nitrogen dynamics, have influenced the terrestrial carbon storage in the past and to investigate how terrestrial carbon and nitrogen dynamics might change in the future (1850 to 2100; one representative "business-as-usual" climate scenario). Single-factor model experiments of CO2 fertilisation and climate change show generally similar directions of the responses of C-N interactions, compared to the C-only version of the model as documented in previous studies using other global models. Under an RCP 8.5 scenario, nitrogen limitation suppresses potential CO2 fertilisation, reducing the cumulative net ecosystem carbon uptake between 1850 and 2100 by 61%, and soil warming-induced increase in nitrogen mineralisation reduces terrestrial carbon loss by 31%. When environmental changes are considered conjointly, carbon sequestration is limited by nitrogen dynamics up to the present. However, during the 21st century, nitrogen dynamics induce a net increase in carbon sequestration, resulting in an overall larger carbon uptake of 17% over the full period. This contrasts with previous results with other global models that have shown an 8 to 37% decrease in carbon uptake relative to modern baseline conditions. Implications for the plausibility of earlier projections of future terrestrial C dynamics based on C-only models are discussed.

  15. Nitrogen feedbacks increase future terrestrial ecosystem carbon uptake in an individual-based dynamic vegetation model

    NASA Astrophysics Data System (ADS)

    Wårlind, D.; Smith, B.; Hickler, T.; Arneth, A.

    2014-01-01

    Recently a considerable amount of effort has been put into quantifying how interactions of the carbon and nitrogen cycle affect future terrestrial carbon sinks. Dynamic vegetation models, representing the nitrogen cycle with varying degree of complexity, have shown diverging constraints of nitrogen dynamics on future carbon sequestration. In this study, we use the dynamic vegetation model LPJ-GUESS to evaluate how population dynamics and resource competition between plant functional types, combined with nitrogen dynamics, have influenced the terrestrial carbon storage in the past and to investigate how terrestrial carbon and nitrogen dynamics might change in the future (1850 to 2100; one exemplary "business-as-usual" climate scenario). Single factor model experiments of CO2 fertilisation and climate change show generally similar directions of the responses of C-N interactions, compared to the C-only version of the model, as documented in previous studies. Under a RCP 8.5 scenario, nitrogen limitation suppresses potential CO2 fertilisation, reducing the cumulative net ecosystem carbon uptake between 1850 and 2100 by 61%, and soil warming-induced increase in nitrogen mineralisation reduces terrestrial carbon loss by 31%. When environmental changes are considered conjointly, carbon sequestration is limited by nitrogen dynamics until present. However, during the 21st century nitrogen dynamics induce a net increase in carbon sequestration, resulting in an overall larger carbon uptake of 17% over the full period. This contradicts earlier model results that showed an 8 to 37% decrease in carbon uptake, questioning the often stated assumption that projections of future terrestrial C dynamics from C-only models are too optimistic.

  16. Effect of metal Additions on the Hydrogen Uptake of Microporous Carbon at Near-Ambient Temperature

    SciTech Connect

    Contescu, Cristian I; Gallego, Nidia C; Bhat, Vinay V

    2010-01-01

    Enhancing the hydrogen sorption capacity of microporous carbon materials at near-ambient temperature continue to be a challenge and the subject of intense research. Physisorption alone on microporous carbons is not strong enough to provide the desired levels of hydrogen uptake. Modifying carbons with small amounts of metals has been proven effective to increase the amounts adsorbed. However, very different mechanisms may be involved when the promoters are transition metals or alkali metals. In this presentation we compare the effect of additions of palladium and/or alkali metals on the hydrogen uptake of microporous carbons, in an attempt to differentiate between the possible mechanisms leading to enhanced hydrogen capacity and fast kinetics.

  17. Multifunctional organic–inorganic hybrid nanoparticles and nanosheets based on chitosan derivative and layered double hydroxide: cellular uptake mechanism and application for topical ocular drug delivery

    PubMed Central

    Chi, Huibo; Gu, Yan; Xu, Tingting; Cao, Feng

    2017-01-01

    To study the cellular uptake mechanism of multifunctional organic–inorganic hybrid nanoparticles and nanosheets, new chitosan–glutathione–valine–valine-layered double hydroxide (CG-VV-LDH) nanosheets with active targeting to peptide transporter-1 (PepT-1) were prepared, characterized and further compared with CG-VV-LDH nanoparticles. Both organic–inorganic hybrid nanoparticles and nanosheets showed a sustained release in vitro and prolonged precorneal retention time in vivo, but CG-VV-LDH nanoparticles showed superior permeability in the isolated cornea of rabbits than CG-VV-LDH nanosheets. Furthermore, results of cellular uptake on human corneal epithelial primary cells (HCEpiC) and retinal pigment epithelial (ARPE-19) cells indicated that both clathrin-mediated endocytosis and active transport of PepT-1 are involved in the internalization of CG-VV-LDH nanoparticles and CG-VV-LDH nanosheets. In summary, the CG-VV-LDH nanoparticle may be a promising carrier as a topical ocular drug delivery system for the treatment of ocular diseases of mid-posterior segments, while the CG-VV-LDH nanosheet may be suitable for the treatment of ocular surface diseases. PMID:28280329

  18. Development of a rhodamine-rhodanine-based fluorescent mercury sensor and its use to monitor real-time uptake and distribution of inorganic mercury in live zebrafish larvae.

    PubMed

    Bera, Kallol; Das, Anand Kant; Nag, Moupriya; Basak, Soumen

    2014-03-04

    We introduce a new rhodamine-rhodanine-based "turn-on" fluorescent sensor (RR1) and describe its application for detection of mercury, including in solution, in live cells, and in a living vertebrate organism. The sensor RR1, which is a one-pot synthesis from rhodamine B, undergoes a rapid and irreversible 1:1 stoichiometric reaction with Hg(2+) in aqueous medium. Using fluorescence correlation spectroscopy (FCS), RR1 was shown to detect the presence of as low as a 0.5 pM concentration of Hg(2+). It may also lend itself to tagging with biomolecules and nanoparticles, leading to the possibility of organelle-specific Hg detection. Results of experiments with mammalian cells and zebrafish show that RR1 is cell and organism permeable and that it responds selectively to mercury ions over other metal ions. In addition, real-time monitoring of inorganic mercury ion uptake by cells and live zebrafish using this chemosensor shows that saturation of mercury ion uptake occurs within 20-30 min in cells and organisms. We also demonstrate the acquisition of high-resolution real-time distribution maps of inorganic mercury (Hg(2+)) in the zebrafish brain by using a simple fluorescence confocal imaging technique.

  19. Polyphosphate accumulation is driven by transcriptome alterations that lead to near-synchronous and near-equivalent uptake of inorganic cations in an arbuscular mycorrhizal fungus.

    PubMed

    Kikuchi, Yusuke; Hijikata, Nowaki; Yokoyama, Kaede; Ohtomo, Ryo; Handa, Yoshihiro; Kawaguchi, Masayoshi; Saito, Katsuharu; Ezawa, Tatsuhiro

    2014-11-01

    Arbuscular mycorrhizal (AM) fungi accumulate a massive amount of phosphate as polyphosphate to deliver to the host, but the underlying physiological and molecular mechanisms have yet to be elucidated. In the present study, the dynamics of cationic components during polyphosphate accumulation were investigated in conjunction with transcriptome analysis. Rhizophagus sp. HR1 was grown with Lotus japonicus under phosphorus-deficient conditions, and extraradical mycelia were harvested after phosphate application at prescribed intervals. Levels of polyphosphate, inorganic cations and amino acids were measured, and RNA-Seq was performed on the Illumina platform. Phosphate application triggered not only polyphosphate accumulation but also near-synchronous and near-equivalent uptake of Na(+) , K(+) , Ca(2+) and Mg(2+) , whereas no distinct changes in the levels of amino acids were observed. During polyphosphate accumulation, the genes responsible for mineral uptake, phosphate and nitrogen metabolism and the maintenance of cellular homeostasis were up-regulated. The results suggest that inorganic cations play a major role in neutralizing the negative charge of polyphosphate, and these processes are achieved by the orchestrated regulation of gene expression. Our findings provide, for the first time, a global picture of the cellular response to increased phosphate availability, which is the initial process of nutrient delivery in the associations.

  20. Preliminary Study: Application of Off-Axis ICOS to Determine Stable Carbon Isotope in Dissolved Inorganic Carbon

    NASA Astrophysics Data System (ADS)

    Kim, Y. T.; Lee, J. M.; Hwang, J. H.; Piao, J.; Woo, N. C.

    2015-12-01

    CO2 is one of the major causes for global climate change. Because stable carbon isotope ratio is used to trace carbon source, several analytical techniques likes IRMS (Isotope Ratio Mass Spectrometry) and LAS (Laser Absorption Spectrometry) were extensively used. Off-axis ICOS, a kind of LAS, has merits on long-term stability and field application, therefore it is widely being used in CCS (Carbon Capture and Storage) field. The aim of this study is to extend the application scope of OA-ICOS to determine dissolved inorganic carbon (DIC). Because OA-ICOS showed dependence of δ13C on CO2 concentration, data processing is required. We tested CO2 Carbon Isotope Analyzer (CCIA-36-EP, Los Gatos Research) with both reference gas (δ13C= -28.28‰) and aqueous solutions prepared by dissolving sodium bicarbonate standards (δ13C= -12.26‰ and +3.96‰). The differences of δ13C between reference and measurement values are plotted by CO2 concentrations, then compared. At first, we checked the similarity between our curve pattern for reference gas and Guillon's research (δ13C= -43.99‰) by other Analyzer. To analyze aqueous samples, more errors can be caused than gas analysis. The carbon isotope fractionation occurs during dissolving standard reagents and extracting DIC as CO2 gas form. This effect is mixed with CO2 concentration dependence effect, therefore the curve patterns are different with that for reference gas. Our experiments are done for various δ13C values. It could be an important point to use OA-ICOS to analyze DIC, too.

  1. Southern Ocean heat and carbon uptake: mechanisms, recent trends, and future changes

    NASA Astrophysics Data System (ADS)

    Froelicher, T. L.

    2015-12-01

    The Southern Ocean's dominant influence on the global heat balance and nutrient and carbon cycles stems from the fact that it is the primary gateway through which Earth's cold, centuries old and nutrient rich deep and bottom waters interact with the atmosphere. The westerly winds in the Southern Hemisphere drive a strongly divergent surface flow that draws up water from below in a wide ring circling the Antarctic continent. In the first part of the talk, we assess the uptake, transport, and storage of oceanic anthropogenic carbon and heat in the Southern Ocean over the period 1861-2005 in a new set of carbon-climate Earth System Models. Simulations show that the Southern Ocean south of 30°S, covering only 30% of the global surface ocean area, accounts for more than 40% of global anthropogenic carbon uptake. Furthermore, the Southern Ocean takes up three quarters of the total excess heat generated by the increasing levels of greenhouse gases in the atmosphere. Anthropogenic carbon and heat storage show a common broad-scale pattern of change, but ocean heat storage is more structured than ocean carbon storage suggesting that different mechanisms are important. The Southern Ocean, however, remains the region where models differ the most in the representation of anthropogenic carbon and, in particular, heat uptake. While the Southern Ocean carbon uptake has increased considerably in recent decades, as expected based on the substantial increase in atmospheric CO2, there is considerable concern that this sink will saturate or even reverse in response to warming, changing ocean circulation and chemistry. In the second part of the talk, novel multi-millennial global warming simulations with a comprehensive Earth System Model under a 1% yr-1 atmospheric CO2 increase to 2xCO2 and constant forcing thereafter scenario will be used to explore future long-term changes in the Southern Ocean carbon uptake. We show that after full equilibration of the model with doubling of

  2. Determination of the origin of dissolved inorganic carbon in groundwater around a reclaimed landfill in Otwock using stable carbon isotopes

    SciTech Connect

    Porowska, Dorota

    2015-05-15

    Highlights: • Research showed the origin of DIC in the groundwater around a reclaimed landfill. • Carbon isotope was used to evaluate the contributions of carbon from different sources. • The leachate-contaminated water was isotopically distinct from the natural groundwater. • DIC in the natural groundwater comes from organic matter and dissolution of carbonates. • In the contaminated water, DIC comes from organic matter in the aquifer and landfill. - Abstract: Chemical and isotopic analyses of groundwater from piezometers located around a reclaimed landfill in Otwock (Poland) were performed in order to trace the origin of dissolved inorganic carbon (DIC) in the groundwater. Due to differences in the isotopic composition of carbon from different sources, an analysis of stable carbon isotopes in the groundwater, together with the Keeling plot approach and a two-component mixing model allow us to evaluate the relative contributions of carbon from these sources in the groundwater. In the natural (background) groundwater, DIC concentrations and the isotopic composition of DIC (δ{sup 13}C{sub DIC}) comes from two sources: decomposition of organic matter and carbonate dissolution within the aquifer sediments, whereas in the leachate-contaminated groundwater, DIC concentrations and δ{sup 13}C{sub DIC} values depend on the degradation of organic matter within the aquifer sediments and biodegradation of organic matter stored in the landfill. From the mixing model, about 4–54% of the DIC pool is derived from organic matter degradation and 96–46% from carbonate dissolution in natural conditions. In the leachate-contaminated groundwater, about 20–53% of the DIC is derived from organic matter degradation of natural origin and 80–47% from biodegradation of organic matter stored in the landfill. Partial pressure of CO{sub 2} (P CO{sub 2}) was generally above the atmospheric, hence atmospheric CO{sub 2} as a source of carbon in DIC pool was negligible in the

  3. Contrast of volatile fatty acid driven and inorganic acid or base driven phosphorus release and uptake in enhanced biological phosphorus removal.

    PubMed

    Randall, Andrew A

    2012-04-01

    Addition of an inorganic acid or base was detrimental to net phosphorus removals in short-term batch experiments, suggesting there might be system upset when pH changes. In contrast, addition of volatile fatty acids (VFAs) increased anaerobic phosphorus release and aerobic phosphorus uptake while maintaining or improving net phosphorus removals. The effect of pH change differed if the acid or base added was inorganic versus organic. Volatile fatty acids that resulted in poly-3-hydroxy-butyrate rather than poly-3-hydroxy-valerate resulted in greater net phosphorus removals, and this corresponded to differences in consumption of reducing equivalents. Acetic acid resulted in improved net phosphorus removal compared to sodium acetate, suggesting that acid forms of VFAs might be superior as supplemental VFAs. It is hypothesized that anaerobic phosphorus release following addition of inorganic acid is primarily a result of phosphorus and proton (H+) symport (excretion from the cell) for pH homeostasis, whereas addition of VFAs results in phosphorus and H+ release to maintain the proton motive force.

  4. Deuterium uptake in magnetic-fusion devices with lithium-conditioned carbon walls.

    PubMed

    Krstic, P S; Allain, J P; Taylor, C N; Dadras, J; Maeda, S; Morokuma, K; Jakowski, J; Allouche, A; Skinner, C H

    2013-03-08

    Lithium wall conditioning has lowered hydrogenic recycling and dramatically improved plasma performance in many magnetic-fusion devices. In this Letter, we report quantum-classical atomistic simulations and laboratory experiments that elucidate the roles of lithium and oxygen in the uptake of hydrogen in amorphous carbon. Surprisingly, we show that lithium creates a high oxygen concentration on a carbon surface when bombarded by deuterium. Furthermore, surface oxygen, rather than lithium, plays the key role in trapping hydrogen.

  5. The Global Influence of Cloud Optical Thickness on Terrestrial Carbon Uptake

    NASA Astrophysics Data System (ADS)

    Zhu, P.; Cheng, S. J.; Keppel-Aleks, G.; Butterfield, Z.; Steiner, A. L.

    2016-12-01

    Clouds play a critical role in regulating Earth's climate. One important way is by changing the type and intensity of solar radiation reaching the Earth's surface, which impacts plant photosynthesis. Specifically, the presence of clouds modifies photosynthesis rates by influencing the amount of diffuse radiation as well as the spectral distribution of solar radiation. Satellite-derived cloud optical thickness (COT) may provide the observational constraint necessary to assess the role of clouds on ecosystems and terrestrial carbon uptake across the globe. Previous studies using ground-based observations at individual sites suggest that below a COT of 7, there is a greater increase in light use efficiency than at higher COT values, providing evidence for higher carbon uptake rates than expected given the reduction in radiation by clouds. However, the strength of the COT-terrestrial carbon uptake correlation across the globe remains unknown. In this study, we investigate the influence of COT on terrestrial carbon uptake on a global scale, which may provide insights into cloud conditions favorable for plant photosynthesis and improve our estimates of the land carbon sink. Global satellite-derived MODIS data show that tropical and subtropical regions tend to have COT values around or below the threshold during growing seasons. We find weak correlations between COT and GPP with Fluxnet MTE global GPP data, which may be due to the uncertainty of upscaling GPP from individual site measurements. Analysis with solar-induced fluorescence (SIF) as a proxy for GPP is also evaluated. Overall, this work constructs a global picture of the role of COT on terrestrial carbon uptake, including its temporal and spatial variations.

  6. Effect of Nutrient/Carbon Supplements on Biological Phosphate and Nitrate Uptake by Protozoan Isolates

    NASA Astrophysics Data System (ADS)

    Akpor, O. B.; Momba, M. N. B.; Okonkwo, J.

    This study was aimed at investigating the effect of nine different nutrient/carbon supplements in mixed liquor on nutrient uptake ability of three wastewater protozoan isolates, which have previously been screened for phosphate and nitrate uptake efficiency. The results revealed that over 50% of phosphate was removed in the presence of sodium acetate, glucose or sucrose. Similarly, nitrate uptake of over 60% was observed in the presence of sodium acetate, sodium succinate, glucose or sucrose. These trends were common in all the isolates. Chemical Oxygen Demand (COD) removal in the mixed liquor was only found to be significantly removed in mixed liquors that were supplemented with glucose, sucrose or sodium succinate. In the presence of sodium acetate, COD was observed to increase. The findings of this investigation have revealed that nutrient uptake and COD removal by the test protozoan isolates may be dependent primarily on the initial nutrient supplement in mixed liquor.

  7. Oceanic carbon dioxide uptake in a model of century-scale global warming

    SciTech Connect

    Sarmiento, J.L.; Le Quere, C.

    1996-11-22

    In a model of ocean-atmosphere interaction that excluded biological processes, the oceanic uptake of atmospheric carbon dioxide (CO{sub 2}) was substantially reduced in scenarios involving global warming relative to control scenarios. The primary reason for the reduced uptake was the weakening or collapse of the ocean thermohaline circulation. Such a large reduction in this ocean uptake would have a major impact o the future growth rate of atmospheric CO{sub 2}. Model simulations that include a simple representation of biological processes show a potentially large offsetting effect resulting from the downward flux of biogenic carbon. However, the magnitude of the offset is difficult to quantify with present knowledge. 19 refs., 3 figs., 2 tabs.

  8. Continuous-flow analysis of dissolved inorganic carbon content in seawater.

    PubMed

    Stoll, M H; Bakker, K; Nobbe, G H; Haese, R R

    2001-09-01

    A rapid, continuous-flow determination of total inorganic carbon (TIC) in seawater samples is presented. The method runs on an autoanalyzer Traacs 800 spectrophotometric system and is calibrated versus certified reference materials readily available. A typical analysis speed of 45 samples/h can be reached with an accuracy of 2-3 microM and a precision of approximately 2.5 microM. The analysis requires only a small amount of sample and is thus ideally suited for pore water samples and samples taken from cultures where sample volume is at a premium. The speed of the analysis makes mapping of oceanic surface water characteristics possible. Potential interference of sulfide in anoxic (e.g., pore water) samples can be masked by the addition of a hydrogen peroxide step. Although the latter is a strong oxidative reagent, no significant effect on TIC concentration due to oxidation of (labile) organic matter could be found.

  9. Inorganic arsenic speciation by differential pulse anodic stripping voltammetry using thoria nanoparticles-carbon paste electrodes.

    PubMed

    Pereira, F J; Vázquez, M D; Debán, L; Aller, A J

    2016-05-15

    Two novel thoria (ThO2) nanoparticles-carbon paste electrodes were used to evaluate an anodic stripping voltammetric method for the direct determination of arsenite and total inorganic arsenic (arsenite plus arsenate) in water samples. The effect of Ag((I)), Cu((II)), Hg((II)), Sb((III)) and Se((IV)) ions on the electrochemical response of arsenic was assayed. The developed electroanalytical method offers a rapid procedure with improved analytical characteristics including good repeatability (3.4%) at low As((III)) concentrations, high selectivity, lower detection limit (0.1 μg L(-1)) and high sensitivity (0.54 μA μg(-1) L). The analytical capability of the optimized method was demonstrated by the determination of arsenic in certified reference materials (trace elements in natural water, trace elements in water and coal fly ash). Copyright © 2016 Elsevier B.V. All rights reserved.

  10. Benthic Primary Production in a Saltmarsh Pond: Insights from Fluxes of Dissolved Inorganic Carbon and Oxygen

    NASA Astrophysics Data System (ADS)

    Karolewski, J. S.; Stanley, R. H.; Howard, E. M.; Spivak, A. C.

    2014-12-01

    Salt marshes are important carbon sinks that exist at continental margins and act as mediators in the exchange of nutrients and carbon between terrestrial and marine environments. Within salt marshes, 10-20% of total surface area is covered by marshtop ponds. The fractional area of marshtop ponds is predicted to increase as sea level rises. Despite their potential importance, the balance between autotrophic and heterotrophic processes within such ponds remain poorly understood. To quantify the balance of metabolic fluxes within salt marsh ponds, chemical fluxes of dissolved inorganic carbon (DIC) and dissolved oxygen (DO) were measured in July, 2014 in benthic flux chambers inserted into a salt marsh pond in the Plum Island Estuary Long-Term Ecosystem Research (PIE-LTER) site. Light and dark chambers were used to enable separation of rates of photosynthesis and respiration. Separate chambers were used to enclose sediment covered by primarily benthic microalgae and primarily benthic macroalgae. Net ecosystem metabolism in the microalgae was ~10 and in the macroalgae ~15 mmol C/m2/hour. Respiration rates were ~10 mmol C/m2/ hour for both microalgae and macroalgae. The resulting fluxes of net ecosystem production in the ponds will be compared with overall marsh net ecosystem flux as measured by an eddy flux tower that was located 100 meters from the pond. Additionally, concurrent measurements of DIC and DO allow quantification of the C:O ratio during respiration (i.e. respiratory quotient) in this system.

  11. Organic and Inorganic Carbon in Paddy Soil as Evaluated by Mid-Infrared Photoacoustic Spectroscopy

    PubMed Central

    Changwen, Du; Jianmin, Zhou; Goyne, Keith W.

    2012-01-01

    Paddy soils are classified as wetlands which play a vital role in climatic change and food production. Soil carbon (C), especially soil organic C (SOC), in paddy soils has been received considerable attention as of recent. However, considerably less attention has been given to soil inorganic carbon (SIC) in paddy soils and the relationship between SOC and SIC at interface between soil and the atmosphere. The objective of this research was to investigate the utility of applying Fourier transform mid-infrared photoacoustic spectroscopy (FTIR-PAS) to explore SOC and SIC present near the surface (0–10 µm) of paddy soils. The FTIR-PAS spectra revealed an unique absorption region in the wavenumber range of 1,350–1,500 cm−1 that was dominated by C-O (carbonate) and C-H bending vibrations (organic materials), and these vibrations were used to represented SIC and SOC, respectively. A circular distribution between SIC and SOC on the surface of paddy soils was determined using principal component analysis (PCA), and the distribution showed no significant relationship with the age of paddy soil. However, SIC and SOC were negatively correlated, and higher SIC content was observed near the soil surface. This relationship suggests that SIC in soil surface plays important roles in the soil C dynamics. PMID:22912863

  12. Comparisons of Three Methods for Organic and Inorganic Carbon in Calcareous Soils of Northwestern China

    PubMed Central

    Wang, Xiujun; Wang, Jiaping; Zhang, Juan

    2012-01-01

    With increasing interest in the carbon cycle on arid land, there is an urgent need to quantify both soil organic carbon (SOC) and inorganic carbon (SIC) thus to assess various methods. Here, we present a study employing three methods for determinations of SOC and SIC in the Yanqi Basin of northwest China. We use an elemental analyzer for both SOC and SIC, the Walkley-Black method for SOC, a modified pressure calcimeter method for SIC, and a simple loss-on-ignition (LOI) procedure for determinations of SOC and SIC. Our analyses show that all three approaches produce consistently low values for SOC (1–14 g kg−1) and high values for SIC (8–53 g kg−1). The Walkley-Black method provides an accurate estimate of SOC with 100% recovery for most soil samples. The pressure calcimeter method is as accurate as the elemental analysis for measuring SIC. In addition, SOC and SIC can be accurately estimated using a two-step LOI approach, i.e., (1) combustion at 375°C for 17 hours to estimate SOC, and (2) subsequent combustion at 800°C for 12 hours to estimate SIC. There are strong linear relationships for both SOC and SIC between the elemental analysis and LOI method, which demonstrates the capability of the two-step LOI technique for estimating SOC and SIC in this arid region. PMID:22952957

  13. Characterization of inorganic carbon-supported microfiltration and ultrafiltration membranes by aqueous phenol adsorption

    SciTech Connect

    Bialopiotrowicz, T.; Blanpain-Avet, P.; Lalande, M.

    1999-06-01

    The adsorption of phenol on inorganic carbon-supported microfiltration and ultrafiltration membranes has been determined. Using the statistical Student`s t-test, it has been shown that phenol adsorption data are well fitted to the Langmuir and BET isotherm equations. It was thus concluded that the adsorption of phenol was monomolecular and that the specific surface area (SSA) calculated from these data was essential. M1 and M2 ultrafiltration membranes were found to have a higher SSA than microfiltration M14 and carbon support membranes. Assuming that a simple model of the porous structure consisted of a packed bed of spherical particles, it was possible to determine an apparent average pore diameter from SSA data using the Carman-Kozeny equation. The SSA determined from phenol adsorption was found to be close to that measured from mercury porosimetry for the microfiltration membrane and carbon support. Such a result is due to the fact that there is a common basis between the Carman-Kozeny equation employed in the adsorption method and the determination of the ratio 4 V/A (V = total porous volume, A = total pore area) in the mercury porosimetry method (as both methods consider a constant volume/surface ratio of the pores along the microporous membrane thickness).

  14. Organic and inorganic carbon in paddy soil as evaluated by mid-infrared photoacoustic spectroscopy.

    PubMed

    Changwen, Du; Jianmin, Zhou; Goyne, Keith W

    2012-01-01

    Paddy soils are classified as wetlands which play a vital role in climatic change and food production. Soil carbon (C), especially soil organic C (SOC), in paddy soils has been received considerable attention as of recent. However, considerably less attention has been given to soil inorganic carbon (SIC) in paddy soils and the relationship between SOC and SIC at interface between soil and the atmosphere. The objective of this research was to investigate the utility of applying Fourier transform mid-infrared photoacoustic spectroscopy (FTIR-PAS) to explore SOC and SIC present near the surface (0-10 µm) of paddy soils. The FTIR-PAS spectra revealed an unique absorption region in the wavenumber range of 1,350-1,500 cm(-1) that was dominated by C-O (carbonate) and C-H bending vibrations (organic materials), and these vibrations were used to represented SIC and SOC, respectively. A circular distribution between SIC and SOC on the surface of paddy soils was determined using principal component analysis (PCA), and the distribution showed no significant relationship with the age of paddy soil. However, SIC and SOC were negatively correlated, and higher SIC content was observed near the soil surface. This relationship suggests that SIC in soil surface plays important roles in the soil C dynamics.

  15. Lithium isotopes in foraminifera shells as a novel proxy for the ocean dissolved inorganic carbon (DIC)

    NASA Astrophysics Data System (ADS)

    Vigier, Nathalie; Rollion-Bard, Claire; Levenson, Yaël; Erez, Jonathan

    2015-01-01

    Past ocean pH and pCO2 are critical parameters for establishing relationships between Earth's climate and the carbon cycle. Previous pCO2 estimates are associated with large uncertainties and are debated. In this study, laboratory cultures of the foraminiferan genus Amphistegina were performed in order to examine the possible factors that control the Li isotope composition (δ7Li) of their shells. δ7Li is insensitive to temperature and pH variations but correlates positively with the Dissolved Inorganic Carbon (DIC) of seawater. Li/Ca ratio in the shells shows negative correlation with δ7Li, consistent with published data for planktonic foraminifera from core tops and from short periods during the Cenozoic. We propose that the sensitivity of δ7Li and Li/Ca ratio to DIC is a biological phenomenon and is related to biomineralization mechanisms in foraminifera. We used the published foraminiferal δ7Li records, and our experimental results, to determine the paleo-ocean DIC and pH for the last glacial-interglacial cycle. The results are consistent with published estimates of pH and pCO2 based on boron isotopes and ice cores. We suggest Li and its isotopes may serve as a new complementary proxy for the paleo-ocean carbonate chemistry.

  16. Variations in phytodetritus derived carbon uptake of the intertidal foraminifera Ammonia tepida and Haynesina germanica

    NASA Astrophysics Data System (ADS)

    Wukovits, Julia; Bukenberger, Patrick; Enge, Annekatrin; Wanek, Wolfgang; Watzka, Margarete; Heinz, Petra

    2016-04-01

    Phytodetritus represents a major component of particulate organic carbon in intertidal mudflats. Estuaries and tidal currents yield an extensive amount of these particles that display a substantial nutrient source for littoral food webs. For benthic foraminifera, a group of marine protists, phytodetritus serves as the main food source. Foraminifera are considered to play a significant role in marine carbon turnover processes and show seasonally very high population densities in intertidal sediments. Therefore, it is important to gather explicit data about the specific carbon uptake behavior of intertidal foraminiferal species. In this study, laboratory feeding experiments were carried out to observe phytodetrital carbon uptake of foraminiferal specimen collected in the German Wadden Sea. Artificially produced phytodetritus was labelled with 13C to follow carbon ingestion into foraminiferal cytoplasm over time at different simulated conditions. The experiments were performed with monocultures under exclusion of other meiofauna. Chlorophyte detritus (Dunaliella tertiolecta) was fed to the two common species Ammonia tepida and Haynesina germanica. Ammonia tepida showed a significantly higher affinity to this food source than H. germanica. Testing the effect of temperature revealed a significant decrease of carbon ingestion with increasing temperature in H. germanica. Observations focusing on A. tepida showed a rising phytodetrital carbon content in the biomass of juvenile individuals in contrast to adult foraminifera. In general, carbon uptake reaches saturation levels a few hours after food supply. Furthermore, A. tepida benefits from constant availability of fresh food rather than from a high amount of phytodetritus derived from a single food pulse. Our investigations showed that the foraminiferal impact on intertidal processing of phytodetrital carbon sources is species specific, temperature related and depends on developmental stage and input dynamics

  17. Tracing solid waste leachate in groundwater using δ13 C from dissolved inorganic carbon.

    PubMed

    Haarstad, Ketil; Mæhlum, Trond

    2013-01-01

    Tracers can be used to monitor emissions of leachate from landfills in order to detect hydrological pathways and to evaluate environmental pollution. We investigated the stable carbon isotope ratio (δ(13)C-Σ CO (2)) in dissolved inorganic carbon and tritium ((3)H) in water, in addition to the tracers of pollution commonly found in relatively high concentrations in leachate, such as chloride (Cl), organic matter (COD), nitrogen (total and NH(4)-N), iron (Fe), electrical conductivity (EC) and pH. The sampling was performed at seven landfills in the south-eastern part of Norway during a period of 5 years. The objective was to evaluate the potential for tracing leachate in the environment with emphasis on groundwater pollution. By measuring the δ(13)C-Σ CO (2) in leachates, groundwaters and surface waters, the influence of leachate can be identified. The value of δ(13)C-Σ CO (2) varied from-5.5 to 25.9 ‰ in leachate, from-25.4 to 14.7 ‰ in groundwater and from-19.7 to-13.1 ‰ in creeks. A comparison of the carbon isotope ratio with COD, EC and the concentrations of total and NH (4)-N, Cl and Fe showed that δ(13)C-Σ CO (2) is a good tracer for leachate due to higher sensitivity compared to other parameters. The mean concentrations of all the studied parameters were higher in the leachate samples; however, only the carbon isotope ratio showed significant differences between all the groups with strong and middle pollution and samples with low pollution, showing that it can be used as a convenient tracer for leachate in groundwater and surface water. The carbon isotope ratio showed strong correlation between nitrogen, EC and bicarbonate, but not with pH. Tritium was only sporadically found in measureable concentrations and is not considered as a suitable tracer at the sampled locations.

  18. Estimating global carbon uptake by lichens and bryophytes with a process-based model

    NASA Astrophysics Data System (ADS)

    Porada, P.; Weber, B.; Elbert, W.; Pöschl, U.; Kleidon, A.

    2013-11-01

    Lichens and bryophytes are abundant globally and they may even form the dominant autotrophs in (sub)polar ecosystems, in deserts and at high altitudes. Moreover, they can be found in large amounts as epiphytes in old-growth forests. Here, we present the first process-based model which estimates the net carbon uptake by these organisms at the global scale, thus assessing their significance for biogeochemical cycles. The model uses gridded climate data and key properties of the habitat (e.g. disturbance intervals) to predict processes which control net carbon uptake, namely photosynthesis, respiration, water uptake and evaporation. It relies on equations used in many dynamical vegetation models, which are combined with concepts specific to lichens and bryophytes, such as poikilohydry or the effect of water content on CO2 diffusivity. To incorporate the great functional variation of lichens and bryophytes at the global scale, the model parameters are characterised by broad ranges of possible values instead of a single, globally uniform value. The predicted terrestrial net uptake of 0.34 to 3.3 Gt yr-1 of carbon and global patterns of productivity are in accordance with empirically-derived estimates. Considering that the assimilated carbon can be invested in processes such as weathering or nitrogen fixation, lichens and bryophytes may play a significant role in biogeochemical cycles.

  19. Estimating global carbon uptake by lichens and bryophytes with a process-based model

    NASA Astrophysics Data System (ADS)

    Porada, P.; Weber, B.; Elbert, W.; Pöschl, U.; Kleidon, A.

    2013-02-01

    Lichens and bryophytes are abundant globally and they may even form the dominant autotrophs in (sub)polar ecosystems, in deserts and at high altitudes. Moreover, they can be found in large amounts as epiphytes in old-growth forests. Here, we present the first process-based model which estimates the net carbon uptake by these organisms at the global scale, thus assessing their significance for biogeochemical cycles. The model uses gridded climate data and key properties of the habitat (e.g. disturbance intervals) to predict processes which control net carbon uptake, namely photosynthesis, respiration, water uptake and evaporation. It relies on equations used in many dynamical vegetation models, which are combined with concepts specific to lichens and bryophytes, such as poikilohydry or the effect of water content on CO2 diffusivity. To incorporate the great functional variation of lichens and bryophytes at the global scale, the model parameters are characterised by broad ranges of possible values instead of a single, globally uniform value. The predicted terrestrial net carbon uptake of 0.34 to 3.3 (Gt C) yr-1 and global patterns of productivity are in accordance with empirically-derived estimates. Considering that the assimilated carbon can be invested in processes such as weathering or nitrogen fixation, lichens and bryophytes may play a significant role in biogeochemical cycles.

  20. Using satellite-derived optical thickness to assess the influence of clouds on terrestrial carbon uptake

    Treesearch

    S.J. Cheng; A.L. Steiner; D.Y. Hollinger; G. Bohrer; K.J. Nadelhoffer

    2016-01-01

    Clouds scatter direct solar radiation, generating diffuse radiation and altering the ratio of direct to diffuse light. If diffuse light increases plant canopy CO2 uptake, clouds may indirectly influence climate by altering the terrestrial carbon cycle. However, past research primarily uses proxies or qualitative categories of clouds to connect...

  1. O3 uptake and drought stress effects on carbon acquisition of ponderosa pine in natural stands

    Treesearch

    N.E. Grulke; H.K. Preisler; C. Rose; J. Kirsch; L. Balduman

    2002-01-01

    • The effect of O3 exposure or uptake on carbon acquisition (net assimilation (A) or gross photosynthesis (Pg)), with and without drought stress, is reported here in 40-yr-old-ponderosa pine (Pinus ponderosa) trees. • Maximum daily gas exchange was...

  2. Kinetic effect of Pd additions on the hydrogen uptake of chemically activated, ultramicroporous carbon

    SciTech Connect

    Bhat, Vinay V; Contescu, Cristian I; Gallego, Nidia C

    2010-01-01

    The effect of mixing chemically-activated ultramicroporous carbon (UMC) with Pd nanopowder is investigated. Results show that Pd addition doubles the rate of hydrogen uptake, but does not enhance the hydrogen capacity or improve desorption kinetics. The effect of Pd on the rate of hydrogen adsorption supports the occurrence of the hydrogen spillover mechanism in the Pd - UMC system.

  3. Direct uptake of organic carbon by grass roots and allocation in leaves and phytoliths: 13C labeling evidence

    NASA Astrophysics Data System (ADS)

    Alexandre, A.; Balesdent, J.; Cazevieille, P.; Chevassus-Rosset, C.; Signoret, P.; Mazur, J.-C.; Harutyunyan, A.; Doelsch, E.; Basile-Doelsch, I.; Miche, H.; Santos, G. M.

    2015-12-01

    In the rhizosphere, the uptake of low molecular weight carbon (C) and nitrogen (N) by plant roots has been well documented. While organic N uptake relatively to total uptake is important, organic C uptake is supposed to be low relatively to the plant's C budget. Recently, radiocarbon analyses demonstrated that a fraction of C from the soil was occluded in amorphous silica micrometric particles that precipitate in plant cells (phytoliths). Here, we investigated whether and in which extent organic C absorbed by grass roots, under the form of either intact amino acids (AAs) or microbial metabolites, can feed the organic C occluded in phytoliths. For this purpose we added 13C- and 15N-labeled AAs to the silicon-rich hydroponic solution of the grass Festuca arundinacea. The experiment was designed to prevent C leakage from the labeled nutritive solution to the chamber atmosphere. After 14 days of growth, the 13C and 15N enrichments (13C-excess and 15N-excess) in the roots, stems and leaves, and phytoliths, as well as the 13C-excess in AAs extracted from roots and stems and leaves, were quantified relatively to a control experiment in which no labelled AAs were added. The net uptake of 13C derived from the labeled AAs supplied to the nutritive solution (AA-13C) by Festuca arundinacea represented 4.5 % of the total AA-13C supply. AA-13C fixed in the plant represented only 0.13 % of total C. However, the experimental conditions may have underestimated the extent of the process under natural and field conditions. Previous studies showed that 15N and 13C can be absorbed by the roots in several organic and inorganic forms. In the present experiment, the fact that phenylalanine and methionine, that were supplied in high amount to the nutritive solution, were more 13C-enriched than other AAs in the roots and stems and leaves strongly suggested that part of AA-13C was absorbed and translocated in its original AA form. The concentration of AA-13C represented only 0.15 % of the

  4. Inorganic carbon in a high latitude estuary-fjord system in Canada's eastern Arctic

    NASA Astrophysics Data System (ADS)

    Turk, D.; Bedard, J. M.; Burt, W. J.; Vagle, S.; Thomas, H.; Azetsu-Scott, K.; McGillis, W. R.; Iverson, S. J.; Wallace, D. W. R.

    2016-09-01

    Rapidly changing conditions in the Arctic can have a significant impact on biogeochemical cycles and can be particularly important in high latitude estuary-fjord systems with abundant and diverse freshwater sources. This study provides a first look into the inorganic carbon system and its relation to freshwater sources in Cumberland Sound in the east coast of Baffin Island, Nunavut, Canada. These data contribute to the very limited set of inorganic carbon measurements in high latitude estuary-fjord systems. During the ice-free conditions in August 2011, the meteoric freshwater fractions (MW) in the upper 40 m ranged from 11 to 21% and no sea ice melt (SIM) was present in the Sound. Surface waters were undersaturated with pCO2 (260 and 300 μatm), and DIC and TA ranged between 1779 and 1966 μmol DIC kg-1, and 1922 and 2140 μmol TA kg-1, respectively. Aragonite saturation (ΩAr) state ranged from 1.9 in the surface to 1.4 in the subsurface waters. Data show decreasing TA and ΩAr with increasing MW fraction and suggest that Cumberland Sound waters would become aragonite undersaturated (ΩAr < 1) at MW = 0.37 (95% CI: 0.29 to 0.56). Estimated local δ18O (-19.2‰) and TA (174 μmol TA kg-1) end-members indicate MW was most likely a mixture of river water and glacial melt. In August 2012, MW fractions at the surface were between 8 and 11.5%, and SIM between 7 and 23%. Significant interannual variability of summertime SIM could potentially result in ΩAr undersaturation.

  5. Functional polarity of the tentacle of the sea anemone Anemonia viridis: role in inorganic carbon acquisition.

    PubMed

    Furla, P; Bénazet-Tambutté, S; Jaubert, J; Allemand, D

    1998-02-01

    The oral epithelial layers of anthozoans have a polarized morphology: photosynthetic endosymbionts live within endodermal cells facing the coelenteric cavity and are separated from the external seawater by the ectodermal layer and the mesoglea. To study if this morphology plays a role in the supply of inorganic carbon for symbiont photosynthesis, we measured the change in pH and the rate of OH- (H+) fluxes induced by each cell layer on a tentacle of the sea anemone Anemonia viridis. Light-induced pH increase of the medium bathing the endodermal layers led to the generation of a transepithelial pH gradient of approximately 0.8 pH units across the tentacle, whereas darkness induced acidification of this medium. The light-induced pH change was associated with an increase of total alkalinity. Only the endodermal layer was able to induce a net OH- secretion (H+ absorption). The light-induced OH- secretion by the endodermal cell layer was dependent on the presence of HCO3- in the compartment facing the ectoderm and was sensitive to several inhibitors of ion transport. [14C] HCO3- incorporation into photosynthates confirmed the ectodermal supply, the extent of which varied from 25 to > 90%, according to HCO3- availability. Our results suggest that the light-induced OH- secretion by the endodermal cell layer followed the polarized transport of HCO3- and its subsequent decarboxylation within the endodermal cell layer. This polarity may play a significant role both in inorganic carbon absorption and in the control of light-enhanced calcification in scleractinian corals.

  6. Carbon uptake, microbial community structure, and mineralization of layered mats from Imperial Geyser, Yellowstone National Park

    NASA Astrophysics Data System (ADS)

    Woycheese, K. M.; Grabenstatter, J.; Haddad, A.; Ricci, J. N.; Johnson, H.; Berelson, W.; Spear, J. R.; Caporaso, J. G.; International Geobiology Course 2011

    2011-12-01

    Layered microbial mats provide an analog for early microbial communities, and remain one of the few microbiological structures consistently preserved in the geologic record. Despite this, growth rates, metabolic capabilities, and methods of mineralization in modern communities are poorly understood. Imperial Geyser, an alkaline siliceous hot spring in Yellowstone National Park, provides a useful setting to study these parameters. Mat and water samples (T = 64-40 °C) were collected for 13C analysis and 13C-spiked bicarbonate and acetate incubation experiments. Carbon isotopes were measured for the stream water, pore water and biomass. We experimentally determined rates of bicarbonate uptake, acetate uptake and mineral content. Bicarbonate uptake rates ranged from 0 - 0.4% per day, while acetate uptake rates ranged from 0 - 2.0% per day. These results indicate that the mat biomass is capable of turnover in about 300 days resulting in potential growth rates of 1-2 cm/year. Organic carbon content (% dry weight) ranged from 2 to 16%, and decreased with depth in the mat. The mineral content of these mats is predominantly amorphous SiO2. An inverse correlation between mineral percent and bicarbonate uptake rate was observed, suggesting that there may be a link between metabolism and the prevention of mineralization. Comparing the 13C and carbon uptake rates with 16S rDNA pyrosequencing data we were able to hypothesize the carbon fixation pathways and heterotrophic interactions occurring in this environment. In general, two patterns of 13C values were observed. The first pattern was characterized by increased heterotrophy with depth. In the other, preliminary evidence supporting a photoheterotrophic lifestyle for Roseiflexus spp. was found.

  7. A novel method for concurrent measurements of dissolved inorganic carbon concentration and its carbon isotope composition δ13C

    NASA Astrophysics Data System (ADS)

    Huang, K.; Cai, W. J.; Kim-Hak, D.; Jonsson, B. F.

    2016-02-01

    The concentration of dissolved inorganic carbon ([DIC]) and its stable carbon isotopic composition (δ13C) in the surface ocean are key to studying the important processes in the carbon cycle, e.g., photosynthesis and respiration, calcification, water mass mixing, and, in particularly, the Suess effect as well as the penetration of anthropogenic carbon into the surface ocean and the subsequent ocean acidification. Real-time, shipboard measurements of these properties are highly desired. Here we present a new method that concurrently measures [DIC] and δ13C of DIC in the surface ocean. The method couples sample acidification and delivery techniques (Apollo Scitech) with a cavity ring-down spectrometer (CRDS, Picarro), and works automatically to analyzer samples at the throughput of 8 minutes/sample. In each sampling cycle, a syringe pump withdraws a fixed volume of phosphoric acid and seawater sample, and injects them slowly into a reaction chamber where they were mixed. In the meantime, the CO2 evolved from the acidified sample is purged by a CO2-free gas flow into a CRDS carbon isotope analyzer for measurements of the CO2 concentration and δ13C-CO2. The concurrent injection, acidification, and purging yield a broad, flat peak of CO2 which is precisely and frequently measured by the CRDS analyzer. [DIC] and δ13C can then be calculated by integrating the concentration and δ13C of the CO2 peak. The precision of the [DIC] and δ13C is <0.15% (3 mmol kg-1 when [DIC] = 2000 μmol kg-1), and <0.1‰, relatively. The system is automated to run continuously onboard a research vessel as well as discrete samples in a lab environment.

  8. The effects of accelerated carbonation on CO(2) uptake and metal release from incineration APC residues.

    PubMed

    Baciocchi, Renato; Costa, Giulia; Di Bartolomeo, Elisabetta; Polettini, Alessandra; Pomi, Raffaella

    2009-12-01

    This work presents the results of a study on accelerated carbonation of incinerator air pollution control residues, with a particular focus on the modifications in the leaching behaviour of the ash. Aqueous carbonation experiments were carried out using 100% CO(2) at different temperatures, pressures and liquid-to-solid ratios, in order to assess their influence on process kinetics, CO(2) uptake and the leaching behaviour of major and trace elements. The ash showed a particularly high reactivity towards CO(2), owing to the abundance of calcium hydroxides phases, with a maximum CO(2) uptake of approximately 250g/kg. The main effects of carbonation on trace metal leaching involved a significant decrease in mobility for Pb, Zn and Cu at high pH values, a slight change or mobilization for Cr and Sb, and no major effects on the release of As and soluble salts. Geochemical modelling of leachates indicated solubility control by different minerals after carbonation. In particular, in the stability pH range of carbonates, solubility control by a number of metal carbonates was clearly suggested by modelling results. These findings indicate that accelerated carbonation of incinerator ashes has the potential to convert trace contaminants into sparingly soluble carbonate forms, with an overall positive effect on their leaching behaviour.

  9. Remote Sensing of Evapotranspiration and Carbon Uptake at Harvard Forest

    NASA Technical Reports Server (NTRS)

    Min, Qilong; Lin, Bing

    2005-01-01

    A land surface vegetation index, defined as the difference of microwave land surface emissivity at 19 and 37 GHz, was calculated for a heavily forested area in north central Massachusetts. The microwave emissivity difference vegetation index (EDVI) was estimated from satellite SSM/I measurements at the defined wavelengths and used to estimate land surface turbulent fluxes. Narrowband visible and infrared measurements and broadband solar radiation observations were used in the EDVI retrievals and turbulent flux estimations. The EDVI values represent physical properties of crown vegetation such as vegetation water content of crown canopies. The collocated land surface turbulent and radiative fluxes were empirically linked together by the EDVI values. The EDVI values are statistically sensitive to evapotranspiration fractions (EF) with a correlation coefficient (R) greater than 0.79 under all-sky conditions. For clear skies, EDVI estimates exhibit a stronger relationship with EF than normalized difference vegetation index (NDVI). Furthermore, the products of EDVI and input energy (solar and photosynthetically-active radiation) are statistically significantly correlated to evapotranspiration (R=0.95) and CO2 uptake flux (R=0.74), respectively.

  10. Estimating the carbon budget and maximizing future carbon uptake for a temperate forest region in the U.S.

    PubMed

    Peckham, Scott D; Gower, Stith T; Buongiorno, Joseph

    2012-06-19

    Forests of the Midwest U.S. provide numerous ecosystem services. Two of these, carbon sequestration and wood production, are often portrayed as conflicting. Currently, carbon management and biofuel policies are being developed to reduce atmospheric CO2 and national dependence on foreign oil, and increase carbon storage in ecosystems. However, the biological and industrial forest carbon cycles are rarely studied in a whole-system structure. The forest system carbon balance is the difference between the biological (net ecosystem production) and industrial (net emissions from forest industry) forest carbon cycles, but to date this critical whole system analysis is lacking. This study presents a model of the forest system, uses it to compute the carbon balance, and outlines a methodology to maximize future carbon uptake in a managed forest region. We used a coupled forest ecosystem process and forest products life cycle inventory model for a regional temperate forest in the Midwestern U.S., and found the net system carbon balance for this 615,000 ha forest was positive (2.29 t C ha-1 yr-1). The industrial carbon budget was typically less than 10% of the biological system annually, and averaged averaged 0.082 t C ha-1 yr-1. Net C uptake over the next 100-years increased by 22% or 0.33 t C ha-1 yr-1 relative to the current harvest rate in the study region under the optized harvest regime. The forest's biological ecosystem current and future carbon uptake capacity is largely determined by forest harvest practices that occurred over a century ago, but we show an optimized harvesting strategy would increase future carbon sequestration, or wood production, by 20-30%, reduce long transportation chain emissions, and maintain many desirable stand structural attributes that are correlated to biodiversity. Our results for this forest region suggest that increasing harvest over the next 100 years increases the strength of the carbon sink, and that carbon

  11. Estimating the carbon budget and maximizing future carbon uptake for a temperate forest region in the U.S.

    PubMed Central

    2012-01-01

    Background Forests of the Midwest U.S. provide numerous ecosystem services. Two of these, carbon sequestration and wood production, are often portrayed as conflicting. Currently, carbon management and biofuel policies are being developed to reduce atmospheric CO2 and national dependence on foreign oil, and increase carbon storage in ecosystems. However, the biological and industrial forest carbon cycles are rarely studied in a whole-system structure. The forest system carbon balance is the difference between the biological (net ecosystem production) and industrial (net emissions from forest industry) forest carbon cycles, but to date this critical whole system analysis is lacking. This study presents a model of the forest system, uses it to compute the carbon balance, and outlines a methodology to maximize future carbon uptake in a managed forest region. Results We used a coupled forest ecosystem process and forest products life cycle inventory model for a regional temperate forest in the Midwestern U.S., and found the net system carbon balance for this 615,000 ha forest was positive (2.29 t C ha-1 yr-1). The industrial carbon budget was typically less than 10% of the biological system annually, and averaged averaged 0.082 t C ha-1 yr-1. Net C uptake over the next 100-years increased by 22% or 0.33 t C ha-1 yr-1 relative to the current harvest rate in the study region under the optized harvest regime. Conclusions The forest’s biological ecosystem current and future carbon uptake capacity is largely determined by forest harvest practices that occurred over a century ago, but we show an optimized harvesting strategy would increase future carbon sequestration, or wood production, by 20-30%, reduce long transportation chain emissions, and maintain many desirable stand structural attributes that are correlated to biodiversity. Our results for this forest region suggest that increasing harvest over the next 100 years increases the strength of

  12. Uptake of chloride and carbonate ions by calcium monosulfoaluminate hydrate

    SciTech Connect

    Mesbah, Adel; Cau-dit-Coumes, Celine; Frizon, Fabien

    2012-08-15

    Decommissioning of old nuclear reactors may produce waste streams containing chlorides and carbonates, including radioactive {sup 36}Cl{sup -} and {sup 14}CO{sub 3}{sup 2-}. Their insolubilization by calcium monosulfoaluminate hydrate was investigated. Carbonates were readily depleted from the solution, giving at thermodynamic equilibrium monocarboaluminate, monocarboaluminate + calcite, or calcite only, depending on the initial ratio between the anion and calcium monosulfoaluminate hydrate. Chloride ions reacted more slowly and were precipitated as Kuzel's salt, Kuzel's and Friedel's salts, or Friedel's salt only. Rietveld refinement of X-Ray powder diffraction patterns was successfully used to quantify the phase distributions, which were compared to thermodynamic calculations. Moreover, analysing the lattice parameters of Kuzel's salt as a function of its chloride content showed the occurrence of a restricted solid solution towards the sulfate side with general formula 3CaO{center_dot}Al{sub 2}O{sub 3}{center_dot}xCaCl{sub 2}{center_dot}(1 - x)CaSO{sub 4}{center_dot}(12 - 2x){center_dot}H{sub 2}O (0.36 {<=} x {<=} 0.50).

  13. Intertidal salt marshes as an important source of inorganic carbon to the coastal ocean

    USGS Publications Warehouse

    Wang, Zhaohui Aleck; Kroeger, Kevin D.; Ganju, Neil K.; Gonneea, Meagan; Chu, Sophie N.

    2016-01-01

    Dynamic tidal export of dissolved inorganic carbon (DIC) to the coastal ocean from highly productive intertidal marshes and its effects on seawater carbonate chemistry are thoroughly evaluated. The study uses a comprehensive approach by combining tidal water sampling of CO2parameters across seasons, continuous in situ measurements of biogeochemically-relevant parameters and water fluxes, with high-resolution modeling in an intertidal salt marsh of the U.S. northeast region. Salt marshes can acidify and alkalize tidal water by injecting CO2 (DIC) and total alkalinity (TA). DIC and TA generation may also be decoupled due to differential effects of marsh aerobic and anaerobic respiration on DIC and TA. As marsh DIC is added to tidal water, the buffering capacity first decreases to a minimum and then increases quickly. Large additions of marsh DIC can result in higher buffering capacity in ebbing tide than incoming tide. Alkalization of tidal water, which mostly occurs in the summer due to anaerobic respiration, can further modify buffering capacity. Marsh exports of DIC and alkalinity may have complex implications for the future, more acidified ocean. Marsh DIC export exhibits high variability over tidal and seasonal cycles, which is modulated by both marsh DIC generation and by water fluxes. The marsh DIC export of 414 g C m−2 yr−1, based on high-resolution measurements and modeling, is more than twice the previous estimates. It is a major term in the marsh carbon budget and translates to one of the largest carbon fluxes along the U.S. East Coast.

  14. Drivers of inorganic carbon dynamics in first-year sea ice: A model study

    NASA Astrophysics Data System (ADS)

    Moreau, Sébastien; Vancoppenolle, Martin; Delille, Bruno; Tison, Jean-Louis; Zhou, Jiayun; Kotovich, Marie; Thomas, David; Geilfus, Nicolas-Xavier; Goosse, Hugues

    2015-04-01

    Sea ice is an active source or a sink for carbon dioxide (CO2), although to what extent is not clear. Here, we analyze CO2 dynamics within sea ice using a one-dimensional halo-thermodynamic sea ice model including gas physics and carbon biogeochemistry. The ice-ocean fluxes, and vertical transport, of total dissolved inorganic carbon (DIC) and total alkalinity (TA) are represented using fluid transport equations. Carbonate chemistry, the consumption and release of CO2 by primary production and respiration, the precipitation and dissolution of ikaite (CaCO3•6H2O) and ice-air CO2 fluxes, are also included. The model is evaluated using observations from a 6-month field study at Point Barrow, Alaska and an ice-tank experiment. At Barrow, results show that the DIC budget is mainly driven by physical processes, wheras brine-air CO2 fluxes, ikaite formation, and net primary production, are secondary factors. In terms of ice-atmosphere CO2 exchanges, sea ice is a net CO2 source and sink in winter and summer, respectively. The formulation of the ice-atmosphere CO2 flux impacts the simulated near-surface CO2 partial pressure (pCO2), but not the DIC budget. Because the simulated ice-atmosphere CO2 fluxes are limited by DIC stocks, and therefore < 2 mmol m-2 day-1, we argue that the observed much larger CO2 fluxes from eddy covariance retrievals cannot be explained by a sea ice direct source and must involve other processes or other sources of CO2. Finally, the simulations suggest that near surface TA/DIC ratios of ~2, sometimes used as an indicator of calcification, would rather suggest outgassing.

  15. Drivers of inorganic carbon dynamics in first-year sea ice: A model study

    NASA Astrophysics Data System (ADS)

    Moreau, Sébastien; Vancoppenolle, Martin; Delille, Bruno; Tison, Jean-Louis; Zhou, Jiayun; Kotovitch, Marie; Thomas, David N.; Geilfus, Nicolas-Xavier; Goosse, Hugues

    2015-01-01

    ice is an active source or a sink for carbon dioxide (CO2), although to what extent is not clear. Here, we analyze CO2 dynamics within sea ice using a one-dimensional halothermodynamic sea ice model including gas physics and carbon biogeochemistry. The ice-ocean fluxes, and vertical transport, of total dissolved inorganic carbon (DIC) and total alkalinity (TA) are represented using fluid transport equations. Carbonate chemistry, the consumption, and release of CO2 by primary production and respiration, the precipitation and dissolution of ikaite (CaCO3·6H2O) and ice-air CO2 fluxes, are also included. The model is evaluated using observations from a 6 month field study at Point Barrow, Alaska, and an ice-tank experiment. At Barrow, results show that the DIC budget is mainly driven by physical processes, wheras brine-air CO2 fluxes, ikaite formation, and net primary production, are secondary factors. In terms of ice-atmosphere CO2 exchanges, sea ice is a net CO2 source and sink in winter and summer, respectively. The formulation of the ice-atmosphere CO2 flux impacts the simulated near-surface CO2 partial pressure (pCO2), but not the DIC budget. Because the simulated ice-atmosphere CO2 fluxes are limited by DIC stocks, and therefore <2 mmol m-2 d-1, we argue that the observed much larger CO2 fluxes from eddy covariance retrievals cannot be explained by a sea ice direct source and must involve other processes or other sources of CO2. Finally, the simulations suggest that near-surface TA/DIC ratios of ˜2, sometimes used as an indicator of calcification, would rather suggest outgassing.

  16. Recent increase in oceanic carbon uptake driven by weaker upper-ocean overturning.

    PubMed

    DeVries, Tim; Holzer, Mark; Primeau, Francois

    2017-02-08

    The ocean is the largest sink for anthropogenic carbon dioxide (CO2), having absorbed roughly 40 per cent of CO2 emissions since the beginning of the industrial era. Recent data show that oceanic CO2 uptake rates have been growing over the past decade, reversing a trend of stagnant or declining carbon uptake during the 1990s. Here we show that ocean circulation variability is the primary driver of these changes in oceanic CO2 uptake over the past several decades. We use a global inverse model to quantify the mean ocean circulation during the 1980s, 1990s and 2000s, and then estimate the impact of decadal circulation changes on the oceanic CO2 sink using a carbon cycling model. We find that during the 1990s an enhanced upper-ocean overturning circulation drove increased outgassing of natural CO2, thus weakening the global CO2 sink. This trend reversed during the 2000s as the overturning circulation weakened. Continued weakening of the upper-ocean overturning is likely to strengthen the CO2 sink in the near future by trapping natural CO2 in the deep ocean, but ultimately may limit oceanic uptake of anthropogenic CO2.

  17. Estimation of Terrestrial COS Uptake From a Global Carbon Cycle Model (CLM-4.0)

    NASA Astrophysics Data System (ADS)

    Fu, W.; Dickinson, R. E.; Gu, L.; Hoffman, F. M.

    2012-12-01

    Carbonyl sulfide (COS), an analog of carbon dioxide is a useful atmospheric tracer of carbon cycle processes. Previous studies have shown that the rate of COS uptake is closely related to the rate of gross primary production (GPP). Here, we implemented mechanistic and empirical descriptions of leaf and soil COS uptake into a global land model featuring carbon and nitrogen interactions, the Community Land Model version 4 model, and obtained new COS flux estimates based on physiological and environmental conditions in the model. Also, using a simulation experiment, we demonstrated that some ecosystem variables, such as LRU (Leaf Relative Uptake) and ERU (Ecosystem Relative Uptake), could provide additional constraints on responses of photosynthesis and respiration to environmental forcings. The ERU calculated from CLM4.0 shows regional and seasonal differences in the balance of ecosystem respiration (RECO) and GPP, and atmospheric measurements of ERU should reflect this variation. Understanding these ecosystem variables is essential for improving predictions of future responses of the terrestrial biosphere to changing environmental conditions.

  18. Glutamine carbon disposal and net glutamine uptake in fetuses of fed and fasted ewes.

    PubMed

    Levitsky, L L; Stonestreet, B S; Mink, K; Zheng, Q

    1993-11-01

    We have traced ovine fetal glutamine carbon uptake and disposal in 7 chronically catheterized fetuses of fed ewes and 10 fetuses of 48-h fasted ewes. Net fetal glutamine uptake (Fick principle, antipyrine blood flow) was 10.0 +/- 2.0 mumol.kg-1 x min-1 in fed fetuses and 6.4 +/- 1.4 mumol.kg-1 x min-1 in fasted fetuses [not significant (NS)]. However, net fetal glutamine uptake was linearly related to the umbilical vein glutamine level (P < 0.05) in fed and fasted fetuses. In contrast, fetal glutamate transfer to the placenta was 4.0 +/- 0.8 mumol.kg-1.min-1 in the fed state and 2.7 +/- 0.1 mumol.kg-1 x min-1 in the fasted state. Net fetal glutamine uptake and fetal glutamate transfer to the placenta were directly correlated (P < 0.05). Fetal glutamine carbon disposal was measured using a primed continuous infusion of [U-14C]-glutamine over a 3-h period and blood sampling during the last hour of infusion (steady state). Disposal was 20.9 +/- 2.6 mumol.kg-1 x min-1 in the fed state and 18.6 +/- 2.3 mumol.kg-1 x min-1 in the maternal fasted state (NS). Glutamine carbon disposal did not correlate with fetal arterial glutamine levels and was not influenced by maternal nutritional state.

  19. Recent increase in oceanic carbon uptake driven by weaker upper-ocean overturning

    NASA Astrophysics Data System (ADS)

    Devries, Tim; Holzer, Mark; Primeau, Francois

    2017-02-01

    The ocean is the largest sink for anthropogenic carbon dioxide (CO2), having absorbed roughly 40 per cent of CO2 emissions since the beginning of the industrial era. Recent data show that oceanic CO2 uptake rates have been growing over the past decade, reversing a trend of stagnant or declining carbon uptake during the 1990s. Here we show that ocean circulation variability is the primary driver of these changes in oceanic CO2 uptake over the past several decades. We use a global inverse model to quantify the mean ocean circulation during the 1980s, 1990s and 2000s, and then estimate the impact of decadal circulation changes on the oceanic CO2 sink using a carbon cycling model. We find that during the 1990s an enhanced upper-ocean overturning circulation drove increased outgassing of natural CO2, thus weakening the global CO2 sink. This trend reversed during the 2000s as the overturning circulation weakened. Continued weakening of the upper-ocean overturning is likely to strengthen the CO2 sink in the near future by trapping natural CO2 in the deep ocean, but ultimately may limit oceanic uptake of anthropogenic CO2.

  20. Enhancing the adsorption of ionic liquids onto activated carbon by the addition of inorganic salts.

    PubMed

    Neves, Catarina M S S; Lemus, Jesús; Freire, Mara G; Palomar, Jose; Coutinho, João A P

    2014-09-15

    Most ionic liquids (ILs) are either water soluble or present a non-negligible miscibility with water that may cause some harmful effects upon their release into the environment. Among other methods, adsorption of ILs onto activated carbon (AC) has shown to be an effective technique to remove these compounds from aqueous solutions. However, this method has proved to be viable only for hydrophobic ILs rather than for the hydrophilic that, being water soluble, have a larger tendency for contamination. In this context, an alternative approach using the salting-out ability of inorganic salts is here proposed to enhance the adsorption of hydrophilic ILs onto activated carbon. The effect of the concentrations of Na2SO4 on the adsorption of five ILs onto AC was investigated. A wide range of ILs that allow the inspection of the IL cation family (imidazolium- and pyridinium-based) and the anion nature (accounting for its hydrophilicity and fluorination) through the adsorption onto AC was studied. In general, it is shown that the use of Na2SO4 enhances the adsorption of ILs onto AC. In particular, this effect is highly relevant when dealing with hydrophilic ILs that are those that are actually poorly removed by AC. In addition, the COnductor like Screening MOdel for Real Solvents (COSMO-RS) was used aiming at complementing the experimental data obtained. This work contributes with the development of novel methods to remove ILs from water streams aiming at creating "greener" processes.

  1. Technical Note: Mesocosm approach to quantify dissolved inorganic carbon percolation fluxes

    NASA Astrophysics Data System (ADS)

    Thaysen, E. M.; Jessen, S.; Ambus, P.; Beier, C.; Postma, D.; Jakobsen, I.

    2014-02-01

    Dissolved inorganic carbon (DIC) fluxes across the vadose zone are influenced by a complex interplay of biological, chemical and physical factors. A novel soil mesocosm system was evaluated as a tool for providing information on the mechanisms behind DIC percolation to the groundwater from unplanted soil. Carbon dioxide partial pressure (pCO2), alkalinity, soil moisture and temperature were measured with depth and time, and DIC in the percolate was quantified using a sodium hydroxide trap. Results showed good reproducibility between two replicate mesocosms. The pCO2 varied between 0.2 and 1.1%, and the alkalinity was 0.1-0.6 meq L-1. The measured cumulative effluent DIC flux over the 78-day experimental period was 185-196 mg L-1 m-2 and in the same range as estimates derived from pCO2 and alkalinity in samples extracted from the side of the mesocosm column and the drainage flux. Our results indicate that the mesocosm system is a promising tool for studying DIC percolation fluxes and other biogeochemical transport processes in unsaturated environments.

  2. Enhancing the adsorption of ionic liquids onto activated carbon by the addition of inorganic salts

    PubMed Central

    Neves, Catarina M. S. S.; Lemus, Jesús; Freire, Mara G.; Palomar, Jose; Coutinho, João A. P.

    2014-01-01

    Most ionic liquids (ILs) are either water soluble or present a non-negligible miscibility with water that may cause some harmful effects upon their release into the environment. Among other methods, adsorption of ILs onto activated carbon (AC) has shown to be an effective technique to remove these compounds from aqueous solutions. However, this method has proved to be viable only for hydrophobic ILs rather than for the hydrophilic that, being water soluble, have a larger tendency for contamination. In this context, an alternative approach using the salting-out ability of inorganic salts is here proposed to enhance the adsorption of hydrophilic ILs onto activated carbon. The effect of the concentrations of Na2SO4 on the adsorption of five ILs onto AC was investigated. A wide range of ILs that allow the inspection of the IL cation family (imidazolium- and pyridinium-based) and the anion nature (accounting for its hydrophilicity and fluorination) through the adsorption onto AC was studied. In general, it is shown that the use of Na2SO4 enhances the adsorption of ILs onto AC. In particular, this effect is highly relevant when dealing with hydrophilic ILs that are those that are actually poorly removed by AC. In addition, the COnductor like Screening MOdel for Real Solvents (COSMO-RS) was used aiming at complementing the experimental data obtained. This work contributes with the development of novel methods to remove ILs from water streams aiming at creating “greener” processes. PMID:25516713

  3. Inorganic Carbon and pH in the Gulf of Mexico: Understanding the Deepwater Horizon Region

    NASA Astrophysics Data System (ADS)

    Young, J.; Yvon-Lewis, S. A.; Bianchi, T. S.; Shields, M. R.; Du, M.

    2014-12-01

    The breakdown and respiration of oil compounds may contribute to the dissolved inorganic carbon (DIC) pool and thus ocean acidification. The Gulf of Mexico (GOM) has an abundance of natural seeps as well as numerous man-made structures that could provide a source of hydrocarbons to the water column. Samples of seawater were collected on the first GISR (Gulf Integrated Spill Research) cruise (G01) during the first week of July 2012. This cruise covered an area of ~1360 km2 roughly centered on the site of the Deepwater Horizon disaster. Alkalinity profiles for the southeastern most stations indicate lower (~100 μmol/kg) alkalinities at depth when compared to other stations sampled. This results in calculated pHs that are ~0.5 units lower at depth than they are at the other stations. Another group of stations show increased DIC concentrations on the order of 100-150 μmol/kg higher than average at depths at 800 m and 1200 m leading to calculated pHs about 0.2 to 0.4 below average for those depths in all of the stations sampled. These features may or may not be persistent in this region, and the elevated DIC concentrations may be related to organic matter (petroleum or other) oxidation. Samples were collected from this same region 2 years later (June 2014) and the persistence of these features will be discussed in the context of linkages with organic carbon respiration and low pHs.

  4. Interaction of UV radiation and inorganic carbon supply in the inhibition of photosynthesis: spectral and temporal responses of two marine picoplankters.

    PubMed

    Sobrino, Cristina; Neale, Patrick J; Lubián, Luis M

    2005-01-01

    The effect of ultraviolet radiation (UVR) on inhibition of photosynthesis was studied in two species of marine picoplankton with different carbon concentration mechanisms: Nannochloropsis gaditana Lubian possesses a bicarbonate uptake system and Nannochloris atomus Butcher a CO2 active transport system. Biological weighting functions (BWFs) for inhibition of photosynthesis by UVR and photosynthesis vs irradiance (PI) curves for photosynthetically active radiation (PAR) were estimated for both species grown with an enriched CO2 supply (high dissolved inorganic carbon [DIC]: 1% CO2 in air) and in atmospheric CO2 levels (low DIC: 0.03% CO2). The response to UVR and PAR exposures was different in each species depending on the DIC treatment. Under PAR exposure, rates of maximum photosynthesis were similar between treatments in N. gaditana. However, the cultures growing in high DIC had lower sensitivity to UVR than the low DIC cultures. In contrast, N. atomus had higher rates of photosynthesis under PAR exposure with high DIC, but the BWFs were not significantly different between treatments. The results suggest that one or more processes in N. gaditana associated with HCO3- transport are target(s) for UV photodamage because there was relatively less UV inhibition of the high DIC-grown cultures in which inorganic carbon fixation is supplied by passive CO2 diffusion. Time courses of photochemical efficiency in PAR, during UV exposure and during subsequent recovery in PAR, were determined using a pulse amplitude modulated fluorometer. The results were consistent with the BWFs. In all time courses, a steady state was obtained after an initial decrease, consistent with a dynamic balance between damage and repair as found for other phytoplankton. However, the relationship of response to exposure showed a steep decline in activity that is consistent with a constant rate of repair. A novel feature of a model developed from a constant repair rate is an explicit threshold for

  5. Regeneration of spent powdered activated carbon saturated with inorganic ions by cavitation united with ion exchange method.

    PubMed

    Li, Gang; Gao, Hong; Li, Yansheng; Yang, Huixin

    2011-06-01

    Using ion exchange resin as transfer media, regenerate powdered activated carbon (PAC) adsorbed inorganic ions by cavitation to enhance the transfer; we studied how the regeneration time and the mass ratio of resin and PAC influence the regeneration rate respectively through re-adsorption. The result showed that the effective regeneration of PAC saturated with inorganic ions was above 90% using ion exchange resin as media and transfer carrier, the quantity of PAC did not reduced but activated in the process. Copyright © 2011 The Research Centre for Eco-Environmental Sciences, Chinese Academy of Sciences. Published by Elsevier B.V. All rights reserved.

  6. Air-water CO2 Fluxes and Inorganic Carbon Dynamics in a Microtidal, Eutrophic Estuary

    NASA Astrophysics Data System (ADS)

    Crosswell, J.; Hales, B. R.; Paerl, H. W.

    2010-12-01

    Though the role of coastal margins in the global carbon cycle is on a slow rise up the scientific agenda, carbon dynamics in microtidal estuaries have been largely ignored. High spatial and temporal variability of wind and water conditions in these systems make integration of air-water CO2 fluxes particularly difficult. Given the high degree of monitoring effort required to accurately determine air-water CO2 fluxes, does the short term variability and significance in the coastal carbon cycle justifies the means? In an effort to address this question we examined air-water CO2 fluxes in the microtidal, eutrophic Neuse River Estuary, NC (NRE) from June 2009 to July 2010. High-resolution, continuous-flow surveys of CO2 partial pressure, pCO2, were conducted biweekly spanning the longitudinal axis of the estuary from the tidal freshwater region to the polyhaline border with the Pamlico Sound. Lateral transects were conducted in each of three hydrologically distinct sections. Discrete surface and bottom water dissolved inorganic carbon (DIC) samples were input into a conservative tracer box model to determine estuarine carbon cycle parameters and exchange coefficients. High temporal variability of air-water CO2 fluxes was closely associated with climatological events affecting estuarine stratification and riverine discharge. The greatest flux rate increase over a 10 day period (-3.01 to 54.76 t-C d-1) was observed during the steepest rise (>500%) in river discharge. Smoother trends were observed on seasonal scales with maximum and minimum whole estuary air-water CO2 flux rates of 54.76 and -20.84 t-C d-1 in mid-fall and late-spring respectively. Air-water CO2 fluxes in the NRE were found to account for up to 5% of total estuarine C import during undersaturated conditions and 14% of C export during oversaturated conditions. Though accurate characterization of air-water CO2 fluxes requires intensive monitoring resources, the magnitude and variability of these exchanges

  7. Inorganic/organic doped carbon aerogels as biosensing materials for the detection of hydrogen peroxide.

    PubMed

    Dong, Sheying; Li, Nan; Suo, Gaochao; Huang, Tinglin

    2013-12-17

    In this article, three different inorganic/organic doped carbon aerogel (CA) materials (Ni-CA, Pd-CA, and Ppy-CA) were, respectively, mixed with ionic liquid (IL) to form three stable composite films, which were used as enhanced elements for an integrated sensing platform to increase the surface area and to improve the electronic transmission rate. Subsequently, the effect of the materials performances such as adsorption, specific surface area and conductivity on electrochemistry for myoglobin (Mb) was discussed using N2 adsorption-desorption isotherm measurements, scanning electron microscopy (SEM), and electrochemical impedance spectroscopy (EIS). Moreover, they could act as sensors toward the detection of hydrogen peroxide (H2O2) with lower detection limits (1.68 μM, 1.02 μM, and 0.85 μM, for Ni-CA/IL/Mb-CPE, Pd-CA/IL/Mb-CPE, and Ppy-CA/IL/Mb-CPE, respectively) and smaller apparent Michaelis-Menten constants KM. The results indicated that the electroconductibility of the doped CA materials would become dominant, thus playing an important role in facilitating the electron transfer. Meanwhile, the synergetic effect with [BMIm]BF4 IL improved the capability of the composite inorganic/organic doped CA/IL matrix for protein immobilization. This work demonstrates the feasibility and the potential of a series of CA-based hybrid materials as biosensors, and further research and development are required to prepare other functional CAs and make them valuable for more extensive application in biosensing.

  8. TOPICAL REVIEW Recent developments in inorganically filled carbon nanotubes: successes and challenges

    NASA Astrophysics Data System (ADS)

    Gautam, Ujjal K.; Costa, Pedro M. F. J.; Bando, Yoshio; Fang, Xiaosheng; Li, Liang; Imura, Masataka; Golberg, Dmitri

    2010-10-01

    Carbon nanotubes (CNTs) are a unique class of nanomaterials that can be imagined as rolled graphene sheets. The inner hollow of a CNT provides an extremely small, one-dimensional space for storage of materials. In the last decade, enormous effort has been spent to produce filled CNTs that combine the properties of both the host CNT and the guest filling material. CNTs filled with various inorganic materials such as metals, alloys, semiconductors and insulators have been obtained using different synthesis approaches including capillary filling and chemical vapor deposition. Recently, several potential applications have emerged for these materials, such as the measurement of temperature at the nanoscale, nano-spot welding, and the storage and delivery of extremely small quantities of materials. A clear distinction between this class of materials and other nanostructures is the existence of an enormous interfacial area between the CNT and the filling matter. Theoretical investigations have shown that the lattice mismatch and strong exchange interaction of CNTs with the guest material across the interface should result in reordering of the guest crystal structure and passivation of the surface dangling bonds and thus yielding new and interesting physical properties. Despite preliminary successes, there remain many challenges in realizing applications of CNTs filled with inorganic materials, such as a comprehensive understanding of their growth and physical properties and control of their structural parameters. In this article, we overview research on filled CNT nanomaterials with special emphasis on recent progress and key achievements. We also discuss the future scope and the key challenges emerging out of a decade of intensive research on these fascinating materials.

  9. Temperature responses of carbon monoxide and hydrogen uptake by vegetated and unvegetated volcanic cinders

    PubMed Central

    King, Caitlin E; King, Gary M

    2012-01-01

    Ecosystem succession on a large deposit of volcanic cinders emplaced on Kilauea Volcano in 1959 has resulted in a mosaic of closed-canopy forested patches and contiguous unvegetated patches. Unvegetated and unshaded surface cinders (Bare) experience substantial diurnal temperature oscillations ranging from moderate (16 °C) to extreme (55 °C) conditions. The surface material of adjacent vegetated patches (Canopy) experiences much smaller fluctuations (14–25 °C) due to shading. To determine whether surface material from these sites showed adaptations by carbon monoxide (CO) and hydrogen (H2) consumption to changes in ambient temperature regimes accompanying succession, we measured responses of CO and H2 uptake to short-term variations in temperature and long-term incubations at elevated temperature. Based on its broader temperature optimum and lower activation energy, Canopy H2 uptake was less sensitive than Bare H2 uptake to temperature changes. In contrast, Bare and Canopy CO uptake responded similarly to temperature during short-term incubations, indicating no differences in temperature sensitivity. However, during extended incubations at 55 °C, CO uptake increased for Canopy but not Bare material, which indicated that the former was capable of thermal adaptation. H2 uptake for material from both sites was completely inhibited at 55 °C throughout extended incubations. These results indicated that plant development during succession did not elicit differences in short-term temperature responses for Bare and Canopy CO uptake, in spite of previously reported differences in CO oxidizer community composition, and differences in average daily and extreme temperatures. Differences associated with vegetation due to succession did, however, lead to a notable capacity for thermophilic CO uptake by Canopy but not Bare material. PMID:22258097

  10. Temperature responses of carbon monoxide and hydrogen uptake by vegetated and unvegetated volcanic cinders.

    PubMed

    King, Caitlin E; King, Gary M

    2012-08-01

    Ecosystem succession on a large deposit of volcanic cinders emplaced on Kilauea Volcano in 1959 has resulted in a mosaic of closed-canopy forested patches and contiguous unvegetated patches. Unvegetated and unshaded surface cinders (Bare) experience substantial diurnal temperature oscillations ranging from moderate (16 °C) to extreme (55 °C) conditions. The surface material of adjacent vegetated patches (Canopy) experiences much smaller fluctuations (14-25 °C) due to shading. To determine whether surface material from these sites showed adaptations by carbon monoxide (CO) and hydrogen (H(2)) consumption to changes in ambient temperature regimes accompanying succession, we measured responses of CO and H(2) uptake to short-term variations in temperature and long-term incubations at elevated temperature. Based on its broader temperature optimum and lower activation energy, Canopy H(2) uptake was less sensitive than Bare H(2) uptake to temperature changes. In contrast, Bare and Canopy CO uptake responded similarly to temperature during short-term incubations, indicating no differences in temperature sensitivity. However, during extended incubations at 55 °C, CO uptake increased for Canopy but not Bare material, which indicated that the former was capable of thermal adaptation. H(2) uptake for material from both sites was completely inhibited at 55 °C throughout extended incubations. These results indicated that plant development during succession did not elicit differences in short-term temperature responses for Bare and Canopy CO uptake, in spite of previously reported differences in CO oxidizer community composition, and differences in average daily and extreme temperatures. Differences associated with vegetation due to succession did, however, lead to a notable capacity for thermophilic CO uptake by Canopy but not Bare material.

  11. [Preliminary research on the feature of dissolved inorganic carbon in Wulixia Reservoir in summer, Guangxi, China].

    PubMed

    Liu, Wen; Pu, Jun-Bing; Yu, Shi; Zhang, Cheng; Au, Yik-Yu; Yuan, Dao-Xian; Yang, Hui; Tang, Wei

    2014-08-01

    To gain more knowledge on the transformation process of dissolved inorganic carbon in a karst reservoir, in situ monitoring, sampling and lab experiments of water columns were carried out at various sampling sites along the flow line in Wulixia Reservoir, Guangxi, China during early July, 2013. Results showed that: (1) The hydrochemical characteristics of study areas were controlled by the carbonate equilibrium system and the hydrochemical type of all water samples was HCO3-Ca + Mg. (2) The DIC concentration decreased gradually (DIC(Average) : from 1.03 to 0.78 mmol x L(-1)) and the delta13C(DIC) increased gradually (delta13C(DIC(Average) : from -10.21per thousand to -6.62 per thousand) from the reservoir end area to dam area. Meanwhile, with the depth increase in water column, the DIC concentration increased gradually (DIC(Average) : from 0.86 to 1.05 mmol x L(-1)) and the delta13C(DIC) decreased gradually (delta13C(DIC(Average) : from -7.88 per thousand to -13.39 per thousand) from the surface to the bottom of the reservoir. Possible reasons for these research results were found as follows: (1) Dissolution-precipitation process of carbonate substance could be inhibited by other processes such as biogeochemical processes, which played little role in delta13C(DIC) variations. (2) Thermal stratification existed in the study areas which could influence the distribution of DIC and delta13C(DIC) by affecting the distribution of plankton and its orientation and strength of metabolism process, and the extent of organic matter decomposition, and so on.

  12. Using water chemistry time series to model dissolved inorganic carbon dynamics in the western Amazon basin

    NASA Astrophysics Data System (ADS)

    Vihermaa, Leena; Waldron, Susan; Newton, Jason

    2013-04-01

    Two small streams (New Colpita and Main Trail) and two rivers (Tambopata and La Torre), in the Tambopata National Reserve, Madre de Dios, Peru, were sampled for water chemistry (conductivity, pH and dissolved oxygen) and hydrology (stage height and flow velocity). In the small streams water chemistry and hydrology variables were logged at 15 minute intervals from Feb 2011 to November 2012. Water samples were collected from all four channels during field campaigns spanning different seasons and targeting the hydrological extremes. All the samples were analysed for dissolved inorganic carbon (DIC) concentration and δ13C (sample size ranging from 77 to 172 depending on the drainage system) and a smaller subset for dissolved organic carbon (DOC) and particulate organic carbon (POC) concentrations. Strong positive relationships were found between conductivity and both DIC concentration and δ13C in the New Colpita stream and the La Torre river. In Tambopata river the trends were less clear and in the Main Trail stream there was very little change in DIC and isotopic composition. The conductivity data was used to model continuous DIC time series for the New Colpita stream. The modelled DIC data agreed well with the measurements; the concordance correlation coefficients between predicted and measured data were 0.91 and 0.87 for mM-DIC and δ13C-DIC, respectively. The predictions of δ13C-DIC were improved when calendar month was included in the model, which indicates seasonal differences in the δ13C-DIC conductivity relationship. At present, continuous DIC sampling still requires expensive instrumentation. Therefore, modelling DIC from a proxy variable which can be monitored continuously with ease and at relatively low cost, such as conductivity, provides a powerful alternative method of DIC determination.

  13. Organic matter turnover in reservoirs of the Harz Mountains (Germany): evidence from 13C/12C changes in dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Barth, Johannes A. C.; Nenning, Franziska; van Geldern, Robert; Mader, Michael; Friese, Kurt

    2014-05-01

    The Harz Mountains in Germany host several reservoirs for drinking water and electricity supply, the largest of which is the Rappbode System with its two pre-reservoirs. They are the Hassel and the Rappbode pre-reservoirs that have about the same size. These pre-reservoirs were investigated in a comparative study in order to quantify turnover of dissolved organic carbon (DOC) as a representative for organic matter. The objective was to find out how organic matter turnover in these reservoirs may affect dissolved inorganic carbon (DIC) and related CO2 dynamics. Depth profiles of dissolved organic and inorganic carbon (DOC and DIC) were established together with their carbon stable isotope distributions (expressed as δ13CDIC and δ13CDOC). Our results showed up to 104 % increase of DIC contents by organic matter turnover when calculated via isotope mass balances. This contrasted observations of DIC concentration differences between waters collected at the surface and at 12 m depth. These concentration comparisons showed much less DIC increases, and in some cases even decreases, between surface and bottom waters. Such discrepancies could be explained by formation of CO2 at depths below the photic zone that reached calculated values above 7000 ppmV. Such high CO2 concentrations may have reduced the DIC pool by upwards migration. Despite such a concentration decrease, turnover of organic matter has likely incorporated its isotope signal into the DIC pool. While not all DOC present was transposed to DIC, other forms of organic matter from sediments may also have transferred their isotope ratio on the DIC pool. However, with its stable isotope ratio of -28.5 permille the measured DOC was representative of C3 plants and can be assumed as a proxy for other forms of sedimentary carbon including carbon from pore waters and particulate organic matter. Other carbon turnover, including DOC leaching, increased import to the reservoirs after precipitation events and

  14. Global and regional ocean carbon uptake and climate change: sensitivity to a substantial mitigation scenario

    NASA Astrophysics Data System (ADS)

    Vichi, Marcello; Manzini, Elisa; Fogli, Pier Giuseppe; Alessandri, Andrea; Patara, Lavinia; Scoccimarro, Enrico; Masina, Simona; Navarra, Antonio

    2011-11-01

    Under future scenarios of business-as-usual emissions, the ocean storage of anthropogenic carbon is anticipated to decrease because of ocean chemistry constraints and positive feedbacks in the carbon-climate dynamics, whereas it is still unknown how the oceanic carbon cycle will respond to more substantial mitigation scenarios. To evaluate the natural system response to prescribed atmospheric "target" concentrations and assess the response of the ocean carbon pool to these values, 2 centennial projection simulations have been performed with an Earth System Model that includes a fully coupled carbon cycle, forced in one case with a mitigation scenario and the other with the SRES A1B scenario. End of century ocean uptake with the mitigation scenario is projected to return to the same magnitude of carbon fluxes as simulated in 1960 in the Pacific Ocean and to lower values in the Atlantic. With A1B, the major ocean basins are instead projected to decrease the capacity for carbon uptake globally as found with simpler carbon cycle models, while at the regional level the response is contrasting. The model indicates that the equatorial Pacific may increase the carbon uptake rates in both scenarios, owing to enhancement of the biological carbon pump evidenced by an increase in Net Community Production (NCP) following changes in the subsurface equatorial circulation and enhanced iron availability from extratropical regions. NCP is a proxy of the bulk organic carbon made available to the higher trophic levels and potentially exportable from the surface layers. The model results indicate that, besides the localized increase in the equatorial Pacific, the NCP of lower trophic levels in the northern Pacific and Atlantic oceans is projected to be halved with respect to the current climate under a substantial mitigation scenario at the end of the twenty-first century. It is thus suggested that changes due to cumulative carbon emissions up to present and the projected concentration

  15. Li isotopes in foraminifera: a new proxy for past ocean dissolved inorganic carbon

    NASA Astrophysics Data System (ADS)

    Vigier, N.; Rollion-Bard, C.; Erez, J.

    2009-12-01

    Past ocean pH and pCO2 are critical parameters for establishing relationships between Earth climate and carbon cycle. For the Miocene-Pleistocene period, two main proxies have been used: carbon isotopes of di-unsaturated alkenones extracted from sea cores, and boron isotope signatures of marine carbonates [1, 2]. Both techniques lead to selfconsistent palaeooceanic pH or pCO2 estimates, but are associated with large uncertainties. Moreover, the paleovariations calculated from boron isotope measurements are a matter of debate. Additional proxies are therefore needed. Based on an in-situ analytical technique recently developed [3], we analysed a series of foraminifera - Amphistegina - cultured under various conditions (in pH, T and Dissolved Inorganic Carbon). We show that the lithium isotope signature of the foraminifera correlates with the DIC (r2 = 0.93). Conversely, there is no dependency of Li isotope signature on pH or T. A simple model of biomineralization in which growth rate is a key parameter can fit the whole dataset, including published values for other foraminifera species [4, 5]. This strongly suggests that the DIC-δ7Li correlation highlighted by the cultured Amphistegina can also be applied to other species. These results, combined with the published oceanic Li and B isotope paleovariations [2, 4, 5], allow us to estimate the ocean DIC and pCO2 evolution for the past 18Ma. The similarity with the pCO2 curve given by carbon isotopes measured in di-unsaturated alkenones is striking. This supports the use of Li isotopes as a new proxy and adds support to the existing data. It also suggests, in contrast with the common view, a less significant role of river input on the variation of the ocean Li isotope composition, at least for the period considered. [1] Pagani et al. (2005) Science 309, 600-603. [2] Pearson & Palmer (2000) Nature 406, 695-699. [3] Vigier et al. (2007) G-cubed 8, Q01003 [4] Hall et al. (2005) Mar. Geology 217, 255-265 [5] Hathorne

  16. Differential Assimilation of Inorganic Carbon and Leucine by Prochlorococcus in the Oligotrophic North Pacific Subtropical Gyre

    PubMed Central

    Björkman, Karin M.; Church, Matthew J.; Doggett, Joseph K.; Karl, David M.

    2015-01-01

    The light effect on photoheterotrophic processes in Prochlorococcus, and primary and bacterial productivity in the oligotrophic North Pacific Subtropical Gyre was investigated using 14C-bicarbonate and 3H-leucine. Light and dark incubation experiments were conducted in situ throughout the euphotic zone (0–175 m) on nine expeditions to Station ALOHA over a 3-year period. Photosynthetrons were also used to elucidate rate responses in leucine and inorganic carbon assimilation as a function of light intensity. Taxonomic group and cell-specific rates were assessed using flow cytometric sorting. The light:dark assimilation rate ratios of leucine in the top 150 m were ∼7:1 for Prochlorococcus, whereas the light:dark ratios for the non-pigmented bacteria (NPB) were not significant different from 1:1. Prochlorococcus assimilated leucine in the dark at per cell rates similar to the NPB, with a contribution to the total community bacterial production, integrated over the euphotic zone, of approximately 20% in the dark and 60% in the light. Depth-resolved primary productivity and leucine incorporation showed that the ratio of Prochlorococcus leucine:primary production peaked at 100 m then declined steeply below the deep chlorophyll maximum (DCM). The photosynthetron experiments revealed that, for Prochlorococcus at the DCM, the saturating irradiance (Ek) for leucine incorporation was reached at approximately half the light intensity required for light saturation of 14C-bicarbonate assimilation. Additionally, high and low red fluorescing Prochlorococcus populations (HRF and LRF), co-occurring at the DCM, had similar Ek values for their respective substrates, however, maximum assimilation rates, for both leucine and inorganic carbon, were two times greater for HRF cells. Our results show that Prochlorococcus contributes significantly to bacterial production estimates using 3H-leucine, whether or not the incubations are conducted in the dark or light, and this should be

  17. Differential Assimilation of Inorganic Carbon and Leucine by Prochlorococcus in the Oligotrophic North Pacific Subtropical Gyre.

    PubMed

    Björkman, Karin M; Church, Matthew J; Doggett, Joseph K; Karl, David M

    2015-01-01

    The light effect on photoheterotrophic processes in Prochlorococcus, and primary and bacterial productivity in the oligotrophic North Pacific Subtropical Gyre was investigated using (14)C-bicarbonate and (3)H-leucine. Light and dark incubation experiments were conducted in situ throughout the euphotic zone (0-175 m) on nine expeditions to Station ALOHA over a 3-year period. Photosynthetrons were also used to elucidate rate responses in leucine and inorganic carbon assimilation as a function of light intensity. Taxonomic group and cell-specific rates were assessed using flow cytometric sorting. The light:dark assimilation rate ratios of leucine in the top 150 m were ∼7:1 for Prochlorococcus, whereas the light:dark ratios for the non-pigmented bacteria (NPB) were not significant different from 1:1. Prochlorococcus assimilated leucine in the dark at per cell rates similar to the NPB, with a contribution to the total community bacterial production, integrated over the euphotic zone, of approximately 20% in the dark and 60% in the light. Depth-resolved primary productivity and leucine incorporation showed that the ratio of Prochlorococcus leucine:primary production peaked at 100 m then declined steeply below the deep chlorophyll maximum (DCM). The photosynthetron experiments revealed that, for Prochlorococcus at the DCM, the saturating irradiance (E k) for leucine incorporation was reached at approximately half the light intensity required for light saturation of (14)C-bicarbonate assimilation. Additionally, high and low red fluorescing Prochlorococcus populations (HRF and LRF), co-occurring at the DCM, had similar E k values for their respective substrates, however, maximum assimilation rates, for both leucine and inorganic carbon, were two times greater for HRF cells. Our results show that Prochlorococcus contributes significantly to bacterial production estimates using (3)H-leucine, whether or not the incubations are conducted in the dark or light, and this should

  18. Nitrogen deposition: how important is it for global terrestrial carbon uptake?

    NASA Astrophysics Data System (ADS)

    Bala, G.; Devaraju, N.; Chaturvedi, R. K.; Caldeira, K.; Nemani, R.

    2013-07-01

    Global carbon budget studies indicate that the terrestrial ecosystems have remained a~large sink for carbon despite widespread deforestation activities. CO2-fertilization, N deposition and re-growth of mid-latitude forests are believed to be key drivers for land carbon uptake. In this study, we assess the importance of N deposition by performing idealized near-equilibrium simulations using the Community Land Model 4.0 (CLM4). In our equilibrium simulations, only 12-17% of the deposited Nitrogen is assimilated into the ecosystem and the corresponding carbon uptake can be inferred from a C : N ratio of 20:1. We calculate the sensitivity of the terrestrial biosphere for CO2-fertilization, climate warming and N deposition as changes in total ecosystem carbon for unit changes in global mean atmospheric CO2 concentration, global mean temperature and Tera grams of Nitrogen deposition per year, respectively. Based on these sensitivities, it is estimated that about 242 PgC could have been taken up by land due to the CO2 fertilization effect and an additional 175 PgC taken up as a result of the increased N deposition since the pre-industrial period. Because of climate warming, terrestrial ecosystem could have lost about 152 PgC during the same period. Therefore, since preindustrial times terrestrial carbon losses due to warming may have been approximately compensated by effects of increased N deposition, whereas the effect of CO2-fertilization is approximately indicative of the current increase in terrestrial carbon stock. Our simulations also suggest that the sensitivity of carbon storage to increased N deposition decreases beyond current levels, indicating climate warming effects on carbon storage may overwhelm N deposition effects in the future.

  19. Nitrogen deposition: how important is it for global terrestrial carbon uptake?

    NASA Astrophysics Data System (ADS)

    Bala, G.; Devaraju, N.; Chaturvedi, R. K.; Caldeira, K.; Nemani, R.

    2013-11-01

    Global carbon budget studies indicate that the terrestrial ecosystems have remained a large sink for carbon despite widespread deforestation activities. CO2 fertilization, N deposition and re-growth of mid-latitude forests are believed to be key drivers for land carbon uptake. In this study, we assess the importance of N deposition by performing idealized near-equilibrium simulations using the Community Land Model 4.0 (CLM4). In our equilibrium simulations, only 12-17% of the deposited nitrogen is assimilated into the ecosystem and the corresponding carbon uptake can be inferred from a C : N ratio of 20 : 1. We calculate the sensitivity of the terrestrial biosphere for CO2 fertilization, climate warming and N deposition as changes in total ecosystem carbon for unit changes in global mean atmospheric CO2 concentration, global mean temperature and Tera grams of nitrogen deposition per year, respectively. Based on these sensitivities, it is estimated that about 242 PgC could have been taken up by land due to the CO2 fertilization effect and an additional 175 PgC taken up as a result of the increased N deposition since the pre-industrial period. Because of climate warming, the terrestrial ecosystem could have lost about 152 PgC during the same period. Therefore, since pre-industrial times terrestrial carbon losses due to warming may have been more or less compensated by effects of increased N deposition, whereas the effect of CO2 fertilization is approximately indicative of the current increase in terrestrial carbon stock. Our simulations also suggest that the sensitivity of carbon storage to increased N deposition decreases beyond current levels, indicating that climate warming effects on carbon storage may overwhelm N deposition effects in the future.

  20. Carbon Uptake and Storage in Old-Growth and Second-Growth Forests in Central Vermont

    NASA Astrophysics Data System (ADS)

    Lloyd, A. H.; Weisser, O.

    2013-12-01

    Managing forests towards the goal of maximizing carbon uptake and storage provides an important tool for climate change mitigation. There is significant spatial and temporal variation among forests, even within an ecosystem type, in annual uptake and storage of carbon. Understanding the causes for that variation is important in refining management practices and restoration goals that promote carbon storage. We explore the variation in carbon storage and uptake among forests differing in age in central Vermont, comparing young, intermediate-aged, and old-growth forests. We generally expected that younger forests would have a higher annual uptake of carbon than older forests. Significant uncertainty exists, however, about the temporal trajectory from a young, rapidly growing forest to an old-growth forest that may be in a steady-state, with no net uptake of carbon. Within each forest, we compare differences among functional groups of species (e.g., hardwoods versus softwoods) in contribution to overall forest carbon uptake and storage. Our study sites include an old-growth hemlock/mixed hardwood forest that has not been directly affected by human activities, and which contains trees upwards of 350 years old; a 130-year-old mixed hardwood forest that has recolonized former pasture land; and a 90-year-old mixed hardwood forest on formerly agricultural floodplain land. Carbon storage in live and dead biomass pools was estimated from allometric equations, based on repeated measurements of tree diameters in permanently marked study plots. Historical patterns of carbon storage in living biomass were estimated by reconstructing tree diameter from measured increment cores, and then estimating the living biomass in each year. As expected, the old-growth forest stored almost twice the C in live biomass as the two second-growth forests, which stored equivalent amounts of carbon, despite the difference in age. Dead biomass was a larger pool of C in the old-growth forest than in

  1. Carbon-Impurity Affected Depth Elemental Distribution in Solution-Processed Inorganic Thin Films for Solar Cell Application.

    PubMed

    Rehan, Shanza; Kim, Ka Young; Han, Jeonghyeob; Eo, Young-Joo; Gwak, Jihye; Ahn, Seung Kyu; Yun, Jae Ho; Yoon, KyungHoon; Cho, Ara; Ahn, SeJin

    2016-03-02

    A common feature of the inorganic thin films including Cu(In,Ga)(S,Se)2 fabricated by nonvacuum solution-based approaches is the doubled-layered structure, with a top dense inorganic film and a bottom carbon-containing residual layer. Although the latter has been considered to be the main efficiency limiting factor, (as a source of high series resistance), the exact influence of this layer is still not clear, and contradictory views are present. In this study, using a CISe as a model system, we report experimental evidence indicating that the carbon residual layer itself is electrically benign to the device performance. Conversely, carbon was found to play a significant role in determining the depth elemental distribution of final film, in which carbon selectively hinders the diffusion of Cu during selenization, resulting in significantly Cu-deficient top CISe layer while improving the film morphology. This carbon-affected compositional and morphological impact on the top CISe films is a determining factor for the device efficiency, which was supported by the finding that CISe solar cells processed from the precursor film containing intermediate amount of carbon demonstrated high efficiencies of up to 9.15% whereas the performances of the devices prepared from the precursor films with very high and very low carbon were notably poor.

  2. Uptake of carbon-11-methionine and fluorodeoxyglucose in non-Hodgkin's lymphoma: A PET study

    SciTech Connect

    Leskinen-Kallio, S.; Ruotsalainen, U.; Nagren, K.T.; Teraes, M.J.; Joensuu, H. )

    1991-06-01

    Uptake of L-(methyl-11C)methionine (11C-methionine) and (18F)-2-fluoro-2-deoxy-D-glucose (FDG) was studied with PET in 14 patients with non-Hodgkin's lymphomas. The low molecular weight fraction of venous plasma separated by fast gel filtration was used as the input function for 11C-methionine studies, and tracer accumulation was analyzed according to Patlak and Gjedde. The average uptake rate of 11C-methionine was 0.0775 {plus minus} 0.0245 min-1 (s.d.) and of FDG 0.0355 {plus minus} 0.0293 min-1, 11C-methionine uptake rate being significantly higher than that of FDG (p less than 0.01). Carbon-11-methionine accumulated strongly in all but one of the lymphomas. FDG accumulated clearly in lymphomas of high-grade malignancy, whereas two intermediate- and three low-grade malignant lymphomas had a poor uptake rate. The tumor/plasma ratio of both 11C-methionine and FDG increased faster in high and intermediate-grade lymphomas than in low-grade lymphomas, but there was considerable overlap between the histologic grades. Carbon-11-methionine seems to be preferable in detecting tumors, while FDG was superior to 11C-methionine in distinguishing the high-grade malignant lymphomas from the other grades.

  3. Measurements of the dissolved inorganic carbon system and associated biogeochemical parameters in the Canadian Arctic, 1974-2009

    NASA Astrophysics Data System (ADS)

    Giesbrecht, K. E.; Miller, L. A.; Davelaar, M.; Zimmermann, S.; Carmack, E.; Johnson, W. K.; Macdonald, R. W.; McLaughlin, F.; Mucci, A.; Williams, W. J.; Wong, C. S.; Yamamoto-Kawai, M.

    2014-03-01

    We have assembled and conducted primary quality control on previously publicly unavailable water column measurements of the dissolved inorganic carbon system and associated biogeochemical parameters (oxygen, nutrients, etc.) made on 26 cruises in the subarctic and Arctic regions dating back to 1974. The measurements are primarily from the western side of the Canadian Arctic, but also include data that cover an area ranging from the North Pacific to the Gulf of St. Lawrence. The data were subjected to primary quality control (QC) to identify outliers and obvious errors. This data set incorporates over four thousand individual measurements of total inorganic carbon (TIC), alkalinity, and pH from the Canadian Arctic over a period of more than 30 years and provides an opportunity to increase our understanding of temporal changes in the inorganic carbon system in northern waters and the Arctic Ocean. The data set is available for download on the CDIAC (Carbon Dioxide Information Analysis Center) website: http://cdiac.ornl.gov/ftp/oceans/IOS_Arctic_Database/ (doi:10.3334/CDIAC/OTG.IOS_ARCT_CARBN).

  4. Sustained carbon uptake and storage following moderate disturbance in a Great Lakes forest.

    PubMed

    Gough, Christopher M; Hardiman, Brady S; Nave, Lucas E; Bohrer, Gil; Maurer, Kyle D; Vogel, Christoph S; Nadelhoffer, Knute J; Curtis, Peter S

    2013-07-01

    Carbon (C) uptake rates in many forests are sustained, or decline only briefly, following disturbances that partially defoliate the canopy. The mechanisms supporting such functional resistance to moderate forest disturbance are largely unknown. We used a large-scale experiment, in which > 6700 Populus (aspen) and Betula (birch) trees were stem-girdled within a 39-ha area, to identify mechanisms sustaining C uptake through partial canopy defoliation. The Forest Accelerated Succession Experiment in northern Michigan, USA, employs a suite of C-cycling measurements within paired treatment and control meteorological flux tower footprints. We found that enhancement of canopy light-use efficiency and maintenance of light absorption maintained net ecosystem production (NEP) and aboveground wood net primary production (NPP) when leaf-area index (LAI) of the treatment forest temporarily declined by nearly half its maximum value. In the year following peak defoliation, redistribution of nitrogen (N) in the treatment forest from senescent early successional aspen and birch to non-girdled later successional species facilitated the recovery of total LAI to pre-disturbance levels. Sustained canopy physiological competency following disturbance coincided with a downward shift in maximum canopy height, indicating that compensatory photosynthetic C uptake by undisturbed, later successional subdominant and subcanopy vegetation supported C-uptake resistance to disturbance. These findings have implications for ecosystem management and modeling, demonstrating that forests may tolerate considerable leaf-area losses without diminishing rates of C uptake. We conclude that the resistance of C uptake to moderate disturbance depends not only on replacement of lost leaf area, but also on rapid compensatory photosynthetic C uptake during defoliation by emerging later successional species.

  5. On the relations between the oceanic uptake of CO2 and its carbon isotopes

    NASA Astrophysics Data System (ADS)

    Heimann, Martin; Maier-Reimer, Ernst

    1996-03-01

    The recent proposals to estimate the oceanic uptake of CO2 by monitoring the oceanic change in 13C/12C isotope ratio [Quay et al., 1992] or the air-sea 13C/12C isotopic disequilibrium [Tans et al., 1993] is reviewed. Because the history of atmospheric CO2 and 13CO2 since preindustrial times is almost the same and increasing in an almost exponential fashion, the oceanic penetration depth of both tracers must be the same. This dynamic constraint permits the establishment of yet a third method to estimate the global ocean uptake of CO2 from 13C measurements. Using available observations in conjunction with canonical values for global carbon cycle parameters, the three methods yield inconsistent oceanic CO2 uptake rates for the time period 1970-1990, ranging from 0.6 to 3.1 GtC yr-1. However, uncertainties in the available carbon cycle data must be taken into account. Using a nonlinear estimation procedure, a consistent scenario with an oceanic CO2 uptake rate of 2.1±0.9 GtC yr-1 can be established. The method also permits an investigation of the sensitivities of the different approaches. An analysis of the results of two three-dimensional simulations with the Hamburg model of the oceanic carbon cycle shows that the 13C isotope indeed tracks the oceanic penetration of anthropogenic CO2. Because of its different time history, bomb produced radiocarbon, as measured at the time of the Geochemical Ocean Sections Study (GEOSECS), correlates not as well to excess carbon.

  6. Influence of cloud optical thickness on surface diffuse light and carbon uptake in forests and croplands

    NASA Astrophysics Data System (ADS)

    Cheng, S. J.; Steiner, A. L.; Nadelhoffer, K. J.

    2014-12-01

    Accurately modeling atmospheric CO2 removal by terrestrial ecosystems requires an understanding of how atmospheric conditions change the rate of photosynthesis across major vegetation types. Diffuse light, which is created from interactions between incident solar radiation and atmospheric aerosols and clouds, has been postulated to increase carbon uptake in terrestrial ecosystems. To determine how cloud conditions affect carbon uptake through its influence on diffuse light, we quantify the relationship between cloud optical thickness, which indicates surface light attenuation by clouds, and surface diffuse light. We then examine the relationship between cloud optical thickness and gross primary productivity (GPP) to determine whether cloud properties could modulate GPP in temperate ecosystems. Surface diffuse light and GPP data are obtained from publically available Ameriflux data (Mead Crop sites, University of Michigan Biological Station, Morgan Monroe, and Howland Forest) and cloud optical thickness data over the Ameriflux sites are retrieved from NASA's Moderate Resolution Imaging Spetroradiometer. We compare the response of GPP to cloud optical thickness between croplands and forests, as well as within ecosystem types to determine ecosystem-specific responses and the role of plant community composition on ecosystem-level GPP under varying cloud conditions. By linking atmospheric cloud properties to surface light conditions and ecosystem carbon fluxes, we refine understanding of land-atmosphere carbon cycling and how changes in atmospheric cloud conditions may influence the future of the land carbon sink.

  7. Contributions of nitrogen deposition and forest regrowth to terrestrial carbon uptake.

    PubMed

    Churkina, Galina; Trusilova, Kristina; Vetter, Mona; Dentener, Frank

    2007-05-29

    The amount of reactive nitrogen deposited on land has doubled globally and become at least five-times higher in Europe, Eastern United States, and South East Asia since 1860 mostly because of increases in fertilizer production and fossil fuel burning. Because vegetation growth in the Northern Hemisphere is typically nitrogen-limited, increased nitrogen deposition could have an attenuating effect on rising atmospheric CO2 by stimulating the vegetation productivity and accumulation of carbon in biomass. This study shows that elevated nitrogen deposition would not significantly enhance land carbon uptake unless we consider its effects on re-growing forests. Our results suggest that nitrogen enriched land ecosystems sequestered 0.62-2.33 PgC in the 1980s and 0.75-2.21 PgC in the 1990s depending on the proportion and age of re-growing forests. During these two decades land ecosystems are estimated to have absorbed 13-41% of carbon emitted by fossil fuel burning. Although land ecosystems and especially forests with lifted nitrogen limitations have the potential to decelerate the rise of CO2 concentrations in the atmosphere, the effect is only significant over a limited period of time. The carbon uptake associated with forest re-growth and amplified by high nitrogen deposition will decrease as soon as the forests reach maturity. Therefore, assessments relying on carbon stored on land from enhanced atmospheric nitrogen deposition to balance fossil fuel emissions may be inaccurate.

  8. Plant diversity effects on ecosystem evapotranspiration and carbon uptake: a controlled environment (Ecotron) and modeling approach

    NASA Astrophysics Data System (ADS)

    Milcu, Alexandru; Roy, Jacques

    2016-04-01

    Effects of species and functional diversity of plants on ecosystem evapotranspiration and carbon fluxes have been rarely assessed simultaneously. Here we present the results from an experiment that combined a lysimeter setup in a controlled environment facility (Ecotron) with large ecosystem samples/ monoliths originating from a long-term biodiversity experiment ("The Jena Experiment") and a modelling approach. We aimed at (1) quantifying the impact of plant species richness (4 vs. 16 species) on day- and night-time ecosystem water vapor fluxes and carbon uptake, (2) partitioning ecosystem evapotranspiration into evaporation and plant transpiration using the Shuttleworth and Wallace (SW) energy partitioning model, and (3) identifying the most parsimonious predictors of water vapor vapor and CO2 fluxes using plant functional trait-based metrics such as functional diversity and community weighted means. The SW model indicated that at low plant species richness, a higher proportion of the available energy was diverted to evaporation (a non-productive flux), while at higher species richness the proportion of ecosystem transpiration (a production-related water flux) increased. This led to an increased carbon gain per amount of water vapor loss (i.e. increased water use efficiency). While the LAI controlled the carbon and water fluxes, we also found that the diversity of plant functional traits, and in particular of leaf nitrogen concentration are potential important predictors of ecosystem transpiration and carbon uptake and consequently significantly contributed to increase in water use efficiency in communities with higher plant diversity.

  9. Microbial Group Specific Uptake Kinetics of Inorganic Phosphate and Adenosine-5′-Triphosphate (ATP) in the North Pacific Subtropical Gyre

    PubMed Central

    Björkman, Karin; Duhamel, Solange; Karl, David M.

    2012-01-01

    We investigated the concentration dependent uptake of inorganic phosphate (Pi) and adenosine-5′-triphosphate (ATP) in microbial populations in the North Pacific Subtropical Gyre (NPSG). We used radiotracers to measure substrate uptake into whole water communities, differentiated microbial size classes, and two flow sorted groups; Prochlorococcus (PRO) and non-pigmented bacteria (NPB). The Pi concentrations, uptake rates, and Pi pool turnover times (Tt) were (mean, ±SD); 54.9 ± 35.0 nmol L−1 (n = 22), 4.8 ± 1.9 nmol L−1 day−1 (n = 19), and 14.7 ± 10.2 days (n = 19), respectively. Pi uptake into >2 μm cells was on average 12 ± 7% (n = 15) of the total uptake. The kinetic response to Pi (10–500 nmol L−1) was small, indicating that the microorganisms were close to their maximum uptake velocity (Vmax). Vmax averaged 8.0 ± 3.6 nmol L−1 day−1 (n = 19) in the >0.2 μm group, with half saturation constants (Km) of 40 ± 28 nmol L−1 (n = 19). PRO had three times the cell specific Pi uptake rate of NPB, at ambient concentrations, but when adjusted to cells L−1 the rates were similar, and these two groups were equally competitive for Pi. The Tt of γ-P-ATP in the >0.2 μm group were shorter than for the Pi pool (4.4 ± 1.0 days; n = 6), but this difference diminished in the larger size classes. The kinetic response to ATP was large in the >0.2 μm class with Vmax exceeding the rates at ambient concentrations (mean 62 ± 27 times; n = 6) with a mean Vmax for γ-P-ATP of 2.8 ± 1.0 nmol L−1 day−1, and Km at 11.5 ± 5.4 nmol L−1 (n = 6). The NPB contribution to γ-P-ATP uptake was high (95 ± 3%, n = 4) at ambient concentrations but decreased to ∼50% at the highest ATP amendment. PRO had Km values 5–10 times greater than NPB. The above indicates that PRO and NPB were in close competition in terms of Pi acquisition

  10. Microstructure-Dependent Gas Adsorption: Accurate Predictions of Methane Uptake in Nanoporous Carbons

    SciTech Connect

    Ihm, Yungok; Cooper, Valentino R; Gallego, Nidia C; Contescu, Cristian I; Morris, James R

    2014-01-01

    We demonstrate a successful, efficient framework for predicting gas adsorption properties in real materials based on first-principles calculations, with a specific comparison of experiment and theory for methane adsorption in activated carbons. These carbon materials have different pore size distributions, leading to a variety of uptake characteristics. Utilizing these distributions, we accurately predict experimental uptakes and heats of adsorption without empirical potentials or lengthy simulations. We demonstrate that materials with smaller pores have higher heats of adsorption, leading to a higher gas density in these pores. This pore-size dependence must be accounted for, in order to predict and understand the adsorption behavior. The theoretical approach combines: (1) ab initio calculations with a van der Waals density functional to determine adsorbent-adsorbate interactions, and (2) a thermodynamic method that predicts equilibrium adsorption densities by directly incorporating the calculated potential energy surface in a slit pore model. The predicted uptake at P=20 bar and T=298 K is in excellent agreement for all five activated carbon materials used. This approach uses only the pore-size distribution as an input, with no fitting parameters or empirical adsorbent-adsorbate interactions, and thus can be easily applied to other adsorbent-adsorbate combinations.

  11. Response of stomatal conductance to drought in ponderosa pine: implications for carbon and ozone uptake.

    PubMed

    Panek, J A; Goldstein, A H

    2001-03-01

    To gain insight into the limitations imposed by a typical Mediterranean-climate summer drought on the uptake of carbon and ozone in the ponderosa pine (Pinus ponderosa Dougl. ex Laws.) ecosystem, we compared diurnal trends in leaf physiology of young trees in a watered and a control plot located in the Sierra Nevada Mountains, CA, USA (Blodgett Forest, 38 degrees 53' N, 120 degrees 37' W, 1315 m elevation). Predawn water potential of trees in the watered plot remained above -0.3 MPa throughout the growing season, whereas it dropped in the control plot from -0.24 to -0.52 MPa between late May and mid-August. Photosynthesis and stomatal conductance of trees in the watered plot were relatively insensitive to atmospheric vapor pressure deficit (VPD), whereas gas exchange of trees in the control plot varied with changes in soil water, VPD and temperature. Although the 1998 growing season was abnormally wet, we saw a pronounced drought effect at the control site. Over the 2 months following the onset of watering, carbon and ozone uptake were measured on three days at widely spaced intervals. Carbon uptake per unit leaf area by 1-year-old foliage of trees in the control plot was 39, 35 and 30% less, respectively, than in the watered plot, and estimated ozone deposition per unit leaf area (ozone concentration times stomatal conductance) was 36, 46 and 41% less.

  12. Stable carbon isotopes in dissolved inorganic carbon: extraction and implications for quantifying the contributions from silicate and carbonate weathering in the Krishna River system during peak discharge.

    PubMed

    Laskar, Amzad H; Gandhi, Naveen; Thirumalai, Kaustubh; Yadava, Madhusudan G; Ramesh, Rengaswamy; Mahajan, Ramakant R; Kumar, Dharmendra

    2014-06-01

    We present a comparative study of two offline methods, a newly developed method and an existing one, for the measurement of the stable carbon isotopic composition (δ(13)C) of dissolved inorganic carbon (DIC; δ(13)CDIC) in natural waters. The measured δ(13)CDIC values of different water samples, prepared from laboratory Na2CO3, ground and oceanic waters, and a laboratory carbonate isotope standard, are found to be accurate and reproducible to within 0.5 ‰\\ (1σ). The extraction of CO2 from water samples by these methods does not require pre-treatment or sample poisoning and can be applied to a variety of natural waters to address carbon cycling in the hydrosphere. In addition, we present a simple method (based on a two-end-member mixing model) to estimate the silicate-weathering contribution to DIC in a river system by using the concentration of DIC and its δ(13)C. This approach is tested with data from the Krishna River system as a case study, thereby quantifying the contribution of silicate and carbonate weathering to DIC, particularly during peak discharge.

  13. The gene required for inorganic carbon transport of Synechocystis PCC6803

    SciTech Connect

    Ogawa, Teruo )

    1990-05-01

    Cyanobacteria possess a CO{sub 2}-concentrating mechanism which involves active transport of inorganic carbon (C{sub i}). Two mutants (RKa and RKb) of {und Synechocystis} PCC6803 defective in C{sub i} transport have been isolated. These mutants required high CO{sub 2} for growth. A clone which complements RKb contained a 5.2 kbp DNA insert. By subcloning, we have constructed a complementing clone with a 1.2 kbp DNA insert. Sequencing of the insert DNA revealed an open reading frame (ORF) which codes a hydrophobic protein consists of 80 amino acids. Insertion of kanamycin resistance gene cartridge into the ORF in the wild-type cells of {und Synechocystis} led to the loss of C{sub i}-transport activity. Sequenching of DNA in the same region of the genome in RKb indicated that the mutation is the change of AAA (Lys) to TAA (stop codon). The clone did not complement RKa. Isolation of a clone which complements RKa is in progress.

  14. Inorganic Nanoparticle-Modified Poly(Phenylene Sulphide)/Carbon Fiber Laminates: Thermomechanical Behaviour

    PubMed Central

    Díez-Pascual, Ana M.; Naffakh, Mohammed

    2013-01-01

    Carbon fiber (CF)-reinforced high-temperature thermoplastics such as poly(phenylene sulphide) (PPS) are widely used in structural composites for aerospace and automotive applications. The porosity of CF-reinforced polymers is a very important topic for practical applications since there is a direct correlation between void content and mechanical properties. In this study, inorganic fullerene-like tungsten disulphide (IF-WS2) lubricant nanoparticles were used to manufacture PPS/IF-WS2/CF laminates via melt-blending and hot-press processing, and the effect of IF-WS2 loading on the quality, thermal and mechanical behaviour of the hybrid composites was investigated. The addition of IF-WS2 improved fiber impregnation, resulting in lower degree of porosity and increased delamination resistance, compression and flexural properties; their reinforcement effect was greater at temperatures above the glass transition (Tg). IF-WS2 contents higher than 0.5 wt % increased Tg and the heat deflection temperature while reduced the coefficient of thermal expansion. The multiscale laminates exhibited higher ignition point and notably reduced peak heat release rate compared to PPS/CF. The coexistence of micro- and nano-scale fillers resulted in synergistic effects that enhanced the stiffness, strength, thermal conductivity and flame retardancy of the matrix. The results presented herein demonstrate that the IF-WS2 are very promising nanofillers to improve the thermomechanical properties of conventional thermoplastic/CF composites. PMID:28811429

  15. Ionising radiation effect on the luminescence emission of inorganic and biogenic calcium carbonates

    NASA Astrophysics Data System (ADS)

    Boronat, C.; Correcher, V.; Virgos, M. D.; Garcia-Guinea, J.

    2017-06-01

    As known, the luminescence emission of mineral phases could be potentially employed for dosimetric purposes in the case of radiological terrorism or radiation accident where conventional monitoring is not available. In this sense, this paper reports on the thermo- (TL) and cathodoluminescence (CL) emission of both biogenic (common periwinkle - littorina littorera - shell made of calcite 90% and aragonite 10%) and inorganic (aragonite 100%) Ca-rich carbonates previously characterized by X-ray diffraction and Raman spectroscopy. Whereas the aragonite sample displays the main CL waveband peaked in the red region (linked to point defects), the more intense emission obtained from the common periwinkle shell appears at higher energies (mainly associated with structural defects). The UV-blue TL emission of the samples, regardless of the origin, displays (i) an acceptable ionizing radiation sensitivity, (ii) linear dose response in the range of interest (up to 8 Gy), (iii) reasonable stability of the TL signal after 700 h of storage with an initial decay of ca. 88% for the mineral sample and 60% for the biogenic sample and maintaining the stability from 150 h onwards. (iv) The tests of thermal stability of the TL emission performed in the range of 180-320 °C confirm a continuum in the trap system.

  16. Assessment of bacterial community structure in nitrifying biofilm under inorganic carbon-sufficient and -limited conditions.

    PubMed

    Bae, Hyokwan; Chung, Yun-Chul; Yang, Heejeong; Lee, Changsoo; Aryapratama, Rio; Yoo, Young J; Lee, Seockheon

    2015-01-01

    In this work, nitrification and changes in the composition of the total bacterial community under inorganic carbon (IC)-limited conditions, in a nitrifying moving bed biofilm reactor, was investigated. A culture-independent analysis of cloning and sequencing based on the 16S rRNA gene was applied to quantify the bacterial diversity and to determine bacterial taxonomic assignment. IC concentrations had significant effects on the stability of ammonia-oxidation as indicated by the reduction of the nitrogen conversion rate with high NH4(+)-N loadings. The predominance of Nitrosomonas europaea was maintained in spite of changes in the IC concentration. In contrast, heterotrophic bacterial species contributed to a high bacterial diversity, and to a dynamic shift in the bacterial community structure, under IC-limited conditions. In this study, individual functions of heterotrophic bacteria were estimated based on taxonomic information. Possible key roles of coexisting heterotrophic bacteria are the assimilation of organic compounds of extracellular polymeric substances produced by nitrifiers, and biofilm formation by providing a filamentous structure and aggregation properties.

  17. High-frequency spectrophotometric measurements of total dissolved inorganic carbon in seawater.

    PubMed

    Wang, Zhaohui Aleck; Chu, Sophie N; Hoering, Katherine A

    2013-07-16

    A new spectrophotometric method was developed to achieve continuous measurements of total dissolved inorganic carbon (DIC) in seawater. It uses a countercurrent flow design and a highly CO2-permeable membrane (Teflon AF 2400) to achieve flow-through CO2 equilibration between an acidified sample and an indicator solution with a fast response time of ~22 s. This method improves the spatiotemporal resolution by more than 1 order of magnitude compared to the existing spectrophotometric method. The flow-through equilibration allows for continuous (~1 Hz) detection and real-time data smoothing. The method had a short-term precision of ± 2.0 μmol kg(-1) for a given flow-through sample. It achieved a field precision of ± 3.6 μmol kg(-1) and successfully captured high DIC variability down to minute scales. Measurements by the new method over the typical range of oceanic DIC showed good agreement with measurements made by an established method (mean differences -1.6 to 0.3 μmol kg(-1) with 1σ ± 6.0-6.7 μmol kg(-1)). This level of precision and accuracy is comparable to that of the existing spectrophotometric method. The characteristics of the new method make it particularly suitable for high-frequency, submerged measurements required for mobile observing platforms in the ocean. It can also be adapted for high-frequency, spectrophotometric measurements of seawater CO2 fugacity.

  18. Predicting Dissolved Inorganic Carbon in Photoautotrophic Microalgae Culture via the Nitrogen Source.

    PubMed

    Nguyen, Binh T; Rittmann, Bruce E

    2015-08-18

    Dissolved inorganic carbon (DIC) and pH are key factors that control the growth rate of microalgae growing photoautotrophically. Being able to quantify how DIC and pH independently affect growth kinetics requires a means to control each parameter independently. In this study, we used the Proton Condition (PC) to develop means to control pH and DIC independently. Using the PC, we found that different N sources systematically affect the alkalinity and the DIC in distinct ways. With pH controlled at a fixed level by CO2 addition, using nitrate as the N source increased the alkalinity and DIC concentration in proportion to the increase in biomass concentration. In contrast, using ammonium caused the alkalinity and DIC to decline, while using ammonium nitrate left the DIC nearly unchanged. Experiments with a model photoautotroph cyanobacterium, Synechocystis sp. PCC 6803, in batch experiments with modified BG-11 media and a pH-stat confirmed all of the DIC predictions of the PC-based model. Thus, this study provides a mechanistic basis for managing the DIC for photoautotrophic cultures through the N source. In particular, using ammonium nitrate makes it possible to control DIC and pH independently in a pH-stat.

  19. Consistency of TTO-NAS inorganic carbon data with modern measurements

    NASA Astrophysics Data System (ADS)

    Tanhua, Toste; Wallace, Douglas W. R.

    2005-07-01

    We compare alkalinity and total dissolved inorganic carbon (DIC) measurements made during the Transient Tracers in the Ocean, North Atlantic Study (TTO-NAS) in 1981 with modern measurements from a TTO reoccupation cruise in 2004 (M60/5). We find that the TTO-NAS alkalinity values are 3.6 +/- 2.3 μmol kg-1 higher than modern alkalinity data tied to Certified Reference Materials. The TTO-NAS DIC values re-calculated from original alkalinity and discrete-pCO2 data using currently accepted constants are 3.8 μmol kg-1 higher than those reported in the revised TTO data set. This difference is reduced to 0.7 μmol kg-1 when our suggested correction to the TTO-NAS alkalinity is applied. These re-calculated DIC values are 2.4 μmol kg-1 too low relative to contemporaneous measurements made by the vacuum extraction/manometric Certified method. Application of this correction brings the TTO data into almost perfect agreement with modern measurements for slowly-ventilated deep water of the eastern Atlantic.

  20. Inorganic Nanoparticle-Modified Poly(Phenylene Sulphide)/ Carbon Fiber Laminates: Thermomechanical Behaviour.

    PubMed

    Díez-Pascual, Ana M; Naffakh, Mohammed

    2013-07-26

    Carbon fiber (CF)-reinforced high-temperature thermoplastics such as poly(phenylene sulphide) (PPS) are widely used in structural composites for aerospace and automotive applications. The porosity of CF-reinforced polymers is a very important topic for practical applications since there is a direct correlation between void content and mechanical properties. In this study, inorganic fullerene-like tungsten disulphide (IF-WS₂) lubricant nanoparticles were used to manufacture PPS/IF-WS₂/CF laminates via melt-blending and hot-press processing, and the effect of IF-WS₂ loading on the quality, thermal and mechanical behaviour of the hybrid composites was investigated. The addition of IF-WS₂ improved fiber impregnation, resulting in lower degree of porosity and increased delamination resistance, compression and flexural properties; their reinforcement effect was greater at temperatures above the glass transition (Tg). IF-WS₂ contents higher than 0.5 wt % increased Tg and the heat deflection temperature while reduced the coefficient of thermal expansion. The multiscale laminates exhibited higher ignition point and notably reduced peak heat release rate compared to PPS/CF. The coexistence of micro- and nano-scale fillers resulted in synergistic effects that enhanced the stiffness, strength, thermal conductivity and flame retardancy of the matrix. The results presented herein demonstrate that the IF-WS₂ are very promising nanofillers to improve the thermomechanical properties of conventional thermoplastic/CF composites.

  1. Photosynthesis in estuarine intertidal microphytobenthos is limited by inorganic carbon availability.

    PubMed

    Vieira, Sónia; Cartaxana, Paulo; Máguas, Cristina; Marques da Silva, Jorge

    2016-04-01

    The effects of dissolved inorganic carbon (DIC) availability on photosynthesis were studied in two estuarine intertidal microphytobenthos (MPB) communities and in the model diatom species Phaeodactylum tricornutum. Kinetics of DIC acquisition, measured with a liquid-phase oxygen electrode, showed higher K(1/2)(DIC) (0.31 mM) and Vm (7.78 nmol min(-1) µg (Chl a)(-1)) for MPB suspensions than for P. tricornutum (K(1/2)(DIC) = 0.23 mM; Vm = 4.64 nmol min(-1) µg (Chl a)(-1)), suggesting the predominance of species with lower affinity for DIC and higher photosynthetic capacity in the MPB. The net photosynthetic rate of the MPB suspensions reached saturation at a DIC concentration of 1-1.5 mM. This range was lower than the concentrations found in the interstitial water of the top 5-mm sediment layer, suggesting no limitation of photosynthesis by DIC in the MPB communities. Accordingly, carbon isotope discrimination revealed a moderate activity of CO2-concentrating mechanisms in the MPB. However, addition of NaHCO3 to intact MPB biofilms caused a significant increase in the relative maximum photosynthetic electron transport rate (rETR max) measured by imaging pulse-amplitude modulated chlorophyll a fluorescence. These results suggest local depletion of DIC at the photic layer of the sediment (the first few hundred µm), where MPB cells accumulate during diurnal low tides. This work provides the first direct experimental evidence of DIC limitation of photosynthesis in highly productive intertidal MPB communities.

  2. Water column profiles of particulate inorganic carbon in the northeast subarctic Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Sutton, J. N.; Bishop, J. K.; Martinez, E. J.; Weiss, G. A.; Weiss, A.; Derr, A.; Strubhar, W.; Robert, M.; Wood, T.

    2013-12-01

    High resolution and real-time measurement of particulate inorganic carbon (PIC) content in seawater is necessary to improve our spatial and temporal understanding of marine carbon flux and the possible effects of ocean acidification on the biological pump. On four occasions since August 2012, we have mapped PIC distribution from surface to bottom at 26 stations along the IOS-Canada Line P transect from western Vancouver Island, BC, Canada to Ocean Station PAPA, 50N 145W using a prototype (PIC001) and a near-commercial quality (PIC008) optical birefringence sensor. The sensors are highly modified 6000m-rated WETLabs C-star transmissometers, which use a polarized laser beam and a cross-polarized receiver to measure photons emitted after passing through birefringent solids. At major stations along Line P (P2, P4, P8, P12, P16, P20, P26), one-liter rosette-collected calibration water samples were filtered through 0.45 μm Supor filters using a small-volume direct filtration system. These samples were analysed for acid-leachable particulate elements (with emphasis on Ca, Na, and Mg) by inductively coupled plasma mass spectrometry (ICPMS). ICPMS PIC was calculated as residual Ca after correction for seawater Ca using Na data. Here we report results for late summer (Aug. 2012) and winter (Feb. 2013). As expected, high levels of PIC (> 100 nmol L-1 to > 2000 nmol L-1) were found in surface waters but rapidly declined at depths greater than 200m and increased again in the nepheloid layer (>50 nmol L-1). Striking seasonal differences in PIC content and PIC profile shape were observed particularly at near shore stations P2, P4, P8 and P12. The results from this research, including sensor evolution and calibration performance, will be presented.

  3. Inorganic carbon limitation and mixotrophic growth in Chlamydomonas from an acidic mining lake.

    PubMed

    Tittel, Jörg; Bissinger, Vera; Gaedke, Ursula; Kamjunke, Norbert

    2005-06-01

    Plankton communities in acidic mining lakes (pH 2.5-3.3) are species-poor because they face extreme environmental conditions, e.g. 150mg l(-1) Fe2+ +Fe3+. We investigated the growth characteristics of the dominant pigmented species, the flagellate Chlamydomonas acidophila, in semi-continuous culture experiments under in situ conditions. The following hypotheses were tested: (1) Low inorganic carbon (IC) concentrations in the epilimnion (e.g. 0.3 mg l(-1)) arising from the low pH limit phototrophic growth (H-1); (2) the additional use of dissolved organic carbon (mixotrophy) leads to higher growth rates under IC-limitation (H-2), and (3) phagotrophy is not relevant (H-3). H-1 was supported as the culture experiments, in situ PAR and IC concentrations indicated that IC potentially limited phototrophic growth in the mixed surface layers. H-2 was also supported: mixotrophic growth always exceeded pure phototrophic growth even when photosynthesis was saturated. Dark growth in filtered lake water illuminated prior to inoculation provided evidence that Chlamydomonas was able to use the natural DOC. The alga did not grow on bacteria, thus confirming H-3. Chlamydomonas exhibited a remarkable resistance to starvation in the dark. The compensation light intensity (ca. 20 micromol photons m(-2) s(-1)) and the maximum phototrophic growth (1.50 d(-1)) fell within the range of algae from non-acidic waters. Overall, Chlamydomonas, a typical r-strategist in circum-neutral systems, showed characteristics of a K-strategist in the stable, acidic lake environment in achieving moderate growth rates and minimizing metabolic losses.

  4. [Study on the content and carbon isotopic composition of water dissolved inorganic carbon from rivers around Xi'an City].

    PubMed

    Guo, Wei; Li, Xiang-Zhong; Liu, Wei-Guo

    2013-04-01

    In this study, the content and isotopic compositions of water dissolved inorganic carbon (DIC) from four typical rivers (Chanhe, Bahe, Laohe and Heihe) around Xi'an City were studied to trace the possible sources of DIC. The results of this study showed that the content of DIC in the four rivers varied from 0.34 to 5.66 mmol x L(-1) with an average value of 1.23 mmol x L(-1). In general, the content of DIC increased from the headstream to the river mouth. The delta13C(DIC) of four rivers ranged from -13.3 per thousand to -7.2 per thousand, with an average value of -10.1 per thousand. The delta13C(DIC) values of river water were all negative (average value of -12.6 per thousand) at the headstream of four rivers, but the delta13C(DIC) values of downstream water were more positive (with an average value of -9.4 per thousand). In addition, delta13C(DIC) of river water showed relatively negative values (the average value of delta13C(DIC) was -10.5 per thousand) near the estuary of the rivers. The variation of the DIC content and its carbon isotope suggested that the DIC sources of the rivers varied from the headstream to the river mouth. The negative delta13C(DIC) value indicated that the DIC may originate from the soil CO2 at the headstream of the rivers. On the other hand, the delta13C(DIC) values of river water at the middle and lower reaches of rivers were more positive, and it showed that soil CO2 produced by respiration of the C4 plants (like corn) and soil carbonates with positive delta13C values may be imported into river water. Meanwhile, the input of pollutants with low delta13C(DIC) values may result in a decrease of delta13C(DIC) values in the rivers. The study indicated that the DIC content and carbon isotope may be used to trace the sources of DIC in rivers around Xi'an City. Our study may provide some basic information for tracing the sources of DIC of rivers in the small watershed area in the Loess Plateau of China.

  5. Impact of sulfuric and nitric acids on carbonate dissolution, and the associated deficit of CO2 uptake in the upper-middle reaches of the Wujiang River, China.

    PubMed

    Huang, Qi-Bo; Qin, Xiao-Qun; Liu, Peng-Yu; Zhang, Lian-Kai; Su, Chun-Tian

    2017-08-01

    Carbonate weathering and the CO2 consumption in karstic area are extensive affected by anthropogenic activities, especially sulfuric and nitric acids usage in the upper-middle reaches of Wujiang River, China. The carbonic acid would be substituted by protons from sulfuric and nitric acids which can be reduce CO2 absorption. Therefore, The goal of this study was to highlight the impacts of sulfuric and nitric acids on carbonate dissolution and the associated deficit of CO2 uptaking during carbonate weathering. The hydrochemistries and carbon isotopic signatures of dissolved inorganic carbon from groundwater were measured during the rainy season (July; 41 samples) and post-rainy season (October; 26 samples). Our results show that Ca(2+) and Mg(2+) were the dominant cations (55.87-98.52%), and HCO3(-) was the dominant anion (63.63-92.87%). The combined concentrations of Ca(2+) and Mg(2+) commonly exceeded the equivalent concentration of HCO3(-), with calculated [Ca(2+)+Mg(2+)]/[HCO3(-)] equivalent ratios of 1.09-2.12. The mean measured groundwater δ(13)CDIC value (-11.38‰) was higher than that expected for carbonate dissolution mediated solely by carbonic acid (-11.5‰), and the strong positive correlation of these values with [SO4(2-)+NO3(-)]/HCO3(-) showed that additional SO4(2-) and NO3(-) were required to compensate for this cation excess. Nitric and sulfuric acids are, therefore, suggested to have acted as the additional proton-promoted weathering agents of carbonate in the region, alongside carbonic acid. The mean contribution of atmospheric/pedospheric CO2 to the total aquatic HCO3(-) decreased by 15.67% (rainy season) and 14.17% (post-rainy season) due to the contributions made by these acids. The annual mean deficit of soil CO2 uptake by carbonate weathering across the study area was 14.92%, which suggests that previous workers may have overestimated the absorption of CO2 by carbonate weathering in other karstic areas worldwide. Copyright © 2017 Elsevier

  6. Impact of sulfuric and nitric acids on carbonate dissolution, and the associated deficit of CO2 uptake in the upper-middle reaches of the Wujiang River, China

    NASA Astrophysics Data System (ADS)

    Huang, Qi-bo; Qin, Xiao-qun; Liu, Peng-yu; Zhang, Lian-kai; Su, Chun-tian

    2017-08-01

    Carbonate weathering and the CO2 consumption in karstic area are extensive affected by anthropogenic activities, especially sulfuric and nitric acids usage in the upper-middle reaches of Wujiang River, China. The carbonic acid would be substituted by protons from sulfuric and nitric acids which can be reduce CO2 absorption. Therefore, The goal of this study was to highlight the impacts of sulfuric and nitric acids on carbonate dissolution and the associated deficit of CO2 uptaking during carbonate weathering. The hydrochemistries and carbon isotopic signatures of dissolved inorganic carbon from groundwater were measured during the rainy season (July; 41 samples) and post-rainy season (October; 26 samples). Our results show that Ca2 + and Mg2 + were the dominant cations (55.87-98.52%), and HCO3- was the dominant anion (63.63-92.87%). The combined concentrations of Ca2 + and Mg2 + commonly exceeded the equivalent concentration of HCO3-, with calculated [Ca2 + + Mg2 +]/[HCO3-] equivalent ratios of 1.09-2.12. The mean measured groundwater δ13CDIC value (- 11.38‰) was higher than that expected for carbonate dissolution mediated solely by carbonic acid (- 11.5‰), and the strong positive correlation of these values with [SO42 - + NO3-]/HCO3- showed that additional SO42 - and NO3- were required to compensate for this cation excess. Nitric and sulfuric acids are, therefore, suggested to have acted as the additional proton-promoted weathering agents of carbonate in the region, alongside carbonic acid. The mean contribution of atmospheric/pedospheric CO2 to the total aquatic HCO3- decreased by 15.67% (rainy season) and 14.17% (post-rainy season) due to the contributions made by these acids. The annual mean deficit of soil CO2 uptake by carbonate weathering across the study area was 14.92%, which suggests that previous workers may have overestimated the absorption of CO2 by carbonate weathering in other karstic areas worldwide.

  7. Ocean Heat and Carbon Uptake in Transient Climate Change: Identifying Model Uncertainty

    NASA Technical Reports Server (NTRS)

    Romanou, Anastasia; Marshall, John

    2015-01-01

    Global warming on decadal and centennial timescales is mediated and ameliorated by the oceansequestering heat and carbon into its interior. Transient climate change is a function of the efficiency by whichanthropogenic heat and carbon are transported away from the surface into the ocean interior (Hansen et al. 1985).Gregory and Mitchell (1997) and Raper et al. (2002) were the first to identify the importance of the ocean heat uptakeefficiency in transient climate change. Observational estimates (Schwartz 2012) and inferences from coupledatmosphere-ocean general circulation models (AOGCMs; Gregory and Forster 2008; Marotzke et al. 2015), suggest thatocean heat uptake efficiency on decadal timescales lies in the range 0.5-1.5 W/sq m/K and is thus comparable to theclimate feedback parameter (Murphy et al. 2009). Moreover, the ocean not only plays a key role in setting the timing ofwarming but also its regional patterns (Marshall et al. 2014), which is crucial to our understanding of regional climate,carbon and heat uptake, and sea-level change. This short communication is based on a presentation given by A.Romanou at a recent workshop, Oceans Carbon and Heat Uptake: Uncertainties and Metrics, co-hosted by US CLIVARand OCB. As briefly reviewed below, we have incomplete but growing knowledge of how ocean models used in climatechange projections sequester heat and carbon into the interior. To understand and thence reduce errors and biases inthe ocean component of coupled models, as well as elucidate the key mechanisms at work, in the final section we outlinea proposed model intercomparison project named FAFMIP. In FAFMIP, coupled integrations would be carried out withprescribed overrides of wind stress and freshwater and heat fluxes acting at the sea surface.

  8. Dissolved organic carbon uptake in streams: A review and assessment of reach-scale measurements

    NASA Astrophysics Data System (ADS)

    Mineau, Madeleine M.; Wollheim, Wilfred M.; Buffam, Ishi; Findlay, Stuart E. G.; Hall, Robert O.; Hotchkiss, Erin R.; Koenig, Lauren E.; McDowell, William H.; Parr, Thomas B.

    2016-08-01

    Quantifying the role that freshwater ecosystems play in the global carbon cycle requires accurate measurement and scaling of dissolved organic carbon (DOC) removal in river networks. We reviewed reach-scale measurements of DOC uptake from experimental additions of simple organic compounds or leachates to inform development of aquatic DOC models that operate at the river network, regional, or continental scale. Median DOC uptake velocity (vf) across all measurements was 2.28 mm min-1. Measurements using simple compound additions resulted in faster vf (2.94 mm min-1) than additions of leachates (1.11 mm min-1). We also reviewed published data of DOC bioavailability for ambient stream water and leaf leachate DOC from laboratory experiments. We used these data to calculate and apply a correction factor to leaf leachate uptake velocity to estimate ambient stream water DOC uptake rates at the reach scale. Using this approach, we estimated a median ambient stream DOC vf of 0.26 mm min-1. Applying these DOC vf values (0.26, 1.11, 2.28, and 2.94 mm min-1) in a river network inverse model in seven watersheds revealed that our estimated ambient DOC vf value is plausible at the network scale and 27 to 45% of DOC input was removed. Applying the median measured simple compound or leachate vf in whole river networks would require unjustifiably high terrestrial DOC inputs to match observed DOC concentrations at the basin mouth. To improve the understanding and importance of DOC uptake in fluvial systems, we recommend using a multiscale approach coupling laboratory assays, with reach-scale measurements, and modeling.

  9. Beyond temperature: Clumped isotope signatures in dissolved inorganic carbon species and the influence of solution chemistry on carbonate mineral composition

    USGS Publications Warehouse

    Tripati, Aradhna K.; Hill, Pamela S.; Eagle, Robert A.; Mosenfelder, Jed L.; Tang, Jianwu; Schauble, Edwin A.; Eiler, John M.; Zeebe, Richard E.; Uchikawa, Joji; Coplen, Tyler B.; Ries, Justin B.; Henry, Drew

    2015-01-01

    “Clumped-isotope” thermometry is an emerging tool to probe the temperature history of surface and subsurface environments based on measurements of the proportion of 13C and 18O isotopes bound to each other within carbonate minerals in 13C18O16O22- groups (heavy isotope “clumps”). Although most clumped isotope geothermometry implicitly presumes carbonate crystals have attained lattice equilibrium (i.e., thermodynamic equilibrium for a mineral, which is independent of solution chemistry), several factors other than temperature, including dissolved inorganic carbon (DIC) speciation may influence mineral isotopic signatures. Therefore we used a combination of approaches to understand the potential influence of different variables on the clumped isotope (and oxygen isotope) composition of minerals.We conducted witherite precipitation experiments at a single temperature and at varied pH to empirically determine 13C-18O bond ordering (Δ47) and δ18O of CO32- and HCO3- molecules at a 25 °C equilibrium. Ab initio cluster models based on density functional theory were used to predict equilibrium 13C-18O bond abundances and δ18O of different DIC species and minerals as a function of temperature. Experiments and theory indicate Δ47 and δ18O compositions of CO32- and HCO3- ions are significantly different from each other. Experiments constrain the Δ47-δ18O slope for a pH effect (0.011 ± 0.001; 12 ⩾ pH ⩾ 7). Rapidly-growing temperate corals exhibit disequilibrium mineral isotopic signatures with a Δ47-δ18O slope of 0.011 ± 0.003, consistent with a pH effect.Our theoretical calculations for carbonate minerals indicate equilibrium lattice calcite values for Δ47 and δ18O are intermediate between HCO3− and CO32−. We analyzed synthetic calcites grown at temperatures ranging from 0.5 to 50 °C with and without the enzyme carbonic anhydrase present. This enzyme catalyzes oxygen isotopic exchange between DIC species and is present in many

  10. Beyond temperature: Clumped isotope signatures in dissolved inorganic carbon species and the influence of solution chemistry on carbonate mineral composition

    NASA Astrophysics Data System (ADS)

    Tripati, Aradhna K.; Hill, Pamela S.; Eagle, Robert A.; Mosenfelder, Jed L.; Tang, Jianwu; Schauble, Edwin A.; Eiler, John M.; Zeebe, Richard E.; Uchikawa, Joji; Coplen, Tyler B.; Ries, Justin B.; Henry, Drew

    2015-10-01

    "Clumped-isotope" thermometry is an emerging tool to probe the temperature history of surface and subsurface environments based on measurements of the proportion of 13C and 18O isotopes bound to each other within carbonate minerals in 13C18O16O22- groups (heavy isotope "clumps"). Although most clumped isotope geothermometry implicitly presumes carbonate crystals have attained lattice equilibrium (i.e., thermodynamic equilibrium for a mineral, which is independent of solution chemistry), several factors other than temperature, including dissolved inorganic carbon (DIC) speciation may influence mineral isotopic signatures. Therefore we used a combination of approaches to understand the potential influence of different variables on the clumped isotope (and oxygen isotope) composition of minerals. We conducted witherite precipitation experiments at a single temperature and at varied pH to empirically determine 13C-18O bond ordering (Δ47) and δ18O of CO32- and HCO3- molecules at a 25 °C equilibrium. Ab initio cluster models based on density functional theory were used to predict equilibrium 13C-18O bond abundances and δ18O of different DIC species and minerals as a function of temperature. Experiments and theory indicate Δ47 and δ18O compositions of CO32- and HCO3- ions are significantly different from each other. Experiments constrain the Δ47-δ18O slope for a pH effect (0.011 ± 0.001; 12 ⩾ pH ⩾ 7). Rapidly-growing temperate corals exhibit disequilibrium mineral isotopic signatures with a Δ47-δ18O slope of 0.011 ± 0.003, consistent with a pH effect. Our theoretical calculations for carbonate minerals indicate equilibrium lattice calcite values for Δ47 and δ18O are intermediate between HCO3- and CO32-. We analyzed synthetic calcites grown at temperatures ranging from 0.5 to 50 °C with and without the enzyme carbonic anhydrase present. This enzyme catalyzes oxygen isotopic exchange between DIC species and is present in many natural systems. The two

  11. Measurements of the dissolved inorganic carbon system and associated biogeochemical parameters in the Canadian Arctic, 1974-2009

    NASA Astrophysics Data System (ADS)

    Giesbrecht, K. E.; Miller, L. A.; Zimmermann, S.; Carmack, E.; Johnson, W. K.; Macdonald, R. W.; McLaughlin, F.; Mucci, A.; Williams, W. J.; Wong, C. S.; Yamamoto-Kawai, M.

    2013-06-01

    We have assembled and conducted primary quality control on previously publically-unavailable water column measurements of the dissolved inorganic carbon system and associated biogeochemical parameters (oxygen, nutrients, etc.) made on 25 cruises in the subarctic and Arctic regions dating from as far back as 1974. The measurements are primarily from the western side of the Canadian Arctic, but also include data ranging from the North Pacific to the Gulf of St. Lawrence. The data were subjected to primary quality control (QC) to identify outliers and obvious errors. This dataset incorporates over four thousand individual measurements of total inorganic carbon (TIC), alkalinity, and pH from the Canadian Arctic over a period of more than 30 yr and provides an opportunity to increase our understanding of temporal changes in the inorganic carbon system in northern waters and the Arctic Ocean. The dataset is available for download on the CDIAC website: http://cdiac.ornl.gov/ftp/oceans/IOS_Arctic_Database/ (doi:10.3334/CDIAC/OTG.IOS_ARCT_CARBN).

  12. New multifunctional porous materials based on inorganic-organic hybrid single-walled carbon nanotubes: gas storage and high-sensitive detection of pesticides.

    PubMed

    Wang, Feng; Zhao, Jinbo; Gong, Jingming; Wen, Lili; Zhou, Li; Li, Dongfeng

    2012-09-10

    Single-walled carbon nanotubes (SWNTs) that are covalently functionalized with benzoic acid (SWNT-PhCOOH) can be integrated with transition-metal ions to form 3D porous inorganic-organic hybrid frameworks (SWNT-Zn). In particular, N(2)-adsorption analysis shows that the BET surface area increases notably from 645.3 to 1209.9 m(2)  g(-1) for SWNTs and SWNT-Zn, respectively. This remarkable enhancement in the surface area of SWNT-Zn is presumably due to the microporous motifs from benzoates coordinated to intercalated zinc ions between the functionalized SWNTs; this assignment was also corroborated by NLDFT pore-size distributions. In addition, the excess-H(2)-uptake maximum of SWNT-Zn reaches about 3.1 wt. % (12 bar, 77 K), which is almost three times that of the original SWNTs (1.2 wt. % at 12 bar, 77 K). Owing to its inherent conductivity and pore structure, as well as good dispersibility, SWNT-Zn is an effective candidate as a sensitive electrochemical stripping voltammetric sensor for organophosphate pesticides (OPs): By using solid-phase extraction (SPE) with SWNT-Zn-modified glassy carbon electrode, the detection limit of methyl parathion (MP) is 2.3 ng mL(-1).

  13. Sources and Dynamics of Inorganic Carbon within the Upper Reaches of the Xi River Basin, Southwest China

    PubMed Central

    Zou, Junyu

    2016-01-01

    The carbon isotopic composition (δ13C) of dissolved and particulate inorganic carbon (DIC; PIC) was used to compare and analyze the origin, dynamics and evolution of inorganic carbon in two headwater tributaries of the Xi River, Southwest China. Carbonate dissolution and soil CO2 were regarded as the primary sources of DIC on the basis of δ13CDIC values which varied along the Nanpan and Beipan Rivers, from −13.9‰ to 8.1‰. Spatial trends in DIC differed between the two rivers (i.e., the tributaries), in part because factors controlling pCO2, which strongly affected carbonate dissolution, differed between the two river basins. Transport of soil CO2 and organic carbon through hydrologic conduits predominately controlled the levels of pCO2 in the Nanpan River. However, pCO2 along the upper reaches of the Nanpan River also was controlled by the extent of urbanization and industrialization relative to agriculture. DIC concentrations in the highly urbanized upper reaches of the Nanpan River were typical higher than in other carbonate-dominated areas of the upper Xi River. Within the Beipan River, the oxidation of organic carbon is the primary process that maintains pCO2 levels. The pCO2 within the Beipan River was more affected by sulfuric acid from coal industries, inputs from a scenic spot, and groundwater than along the Nanpan River. With regards to PIC, the contents and δ13C values in the Nanpan River were generally lower than those in the Beipan River, indicating that chemical and physical weathering contributes more marine carbonate detritus to the PIC along the Beipan River. The CO2 evasion flux from the Nanpan River was higher than that in the Beipan River, and generally higher than along the middle and lower reaches of the Xi River, demonstrating that the Nanpan River is an important net source of atmospheric CO2 in Southwest China. PMID:27513939

  14. Sources and Dynamics of Inorganic Carbon within the Upper Reaches of the Xi River Basin, Southwest China.

    PubMed

    Zou, Junyu

    2016-01-01

    The carbon isotopic composition (δ13C) of dissolved and particulate inorganic carbon (DIC; PIC) was used to compare and analyze the origin, dynamics and evolution of inorganic carbon in two headwater tributaries of the Xi River, Southwest China. Carbonate dissolution and soil CO2 were regarded as the primary sources of DIC on the basis of δ13CDIC values which varied along the Nanpan and Beipan Rivers, from -13.9‰ to 8.1‰. Spatial trends in DIC differed between the two rivers (i.e., the tributaries), in part because factors controlling pCO2, which strongly affected carbonate dissolution, differed between the two river basins. Transport of soil CO2 and organic carbon through hydrologic conduits predominately controlled the levels of pCO2 in the Nanpan River. However, pCO2 along the upper reaches of the Nanpan River also was controlled by the extent of urbanization and industrialization relative to agriculture. DIC concentrations in the highly urbanized upper reaches of the Nanpan River were typical higher than in other carbonate-dominated areas of the upper Xi River. Within the Beipan River, the oxidation of organic carbon is the primary process that maintains pCO2 levels. The pCO2 within the Beipan River was more affected by sulfuric acid from coal industries, inputs from a scenic spot, and groundwater than along the Nanpan River. With regards to PIC, the contents and δ13C values in the Nanpan River were generally lower than those in the Beipan River, indicating that chemical and physical weathering contributes more marine carbonate detritus to the PIC along the Beipan River. The CO2 evasion flux from the Nanpan River was higher than that in the Beipan River, and generally higher than along the middle and lower reaches of the Xi River, demonstrating that the Nanpan River is an important net source of atmospheric CO2 in Southwest China.

  15. Sensitivity Analysis Tailored to Constrain 21st Century Terrestrial Carbon-Uptake

    NASA Astrophysics Data System (ADS)

    Muller, S. J.; Gerber, S.

    2013-12-01

    The long-term fate of terrestrial carbon (C) in response to climate change remains a dominant source of uncertainty in Earth-system model projections. Increasing atmospheric CO2 could be mitigated by long-term net uptake of C, through processes such as increased plant productivity due to "CO2-fertilization". Conversely, atmospheric conditions could be exacerbated by long-term net release of C, through processes such as increased decomposition due to higher temperatures. This balance is an important area of study, and a major source of uncertainty in long-term (>year 2050) projections of planetary response to climate change. We present results from an innovative application of sensitivity analysis to LM3V, a dynamic global vegetation model (DGVM), intended to identify observed/observable variables that are useful for constraining long-term projections of C-uptake. We analyzed the sensitivity of cumulative C-uptake by 2100, as modeled by LM3V in response to IPCC AR4 scenario climate data (1860-2100), to perturbations in over 50 model parameters. We concurrently analyzed the sensitivity of over 100 observable model variables, during the extant record period (1970-2010), to the same parameter changes. By correlating the sensitivities of observable variables with the sensitivity of long-term C-uptake we identified model calibration variables that would also constrain long-term C-uptake projections. LM3V employs a coupled carbon-nitrogen cycle to account for N-limitation, and we find that N-related variables have an important role to play in constraining long-term C-uptake. This work has implications for prioritizing field campaigns to collect global data that can help reduce uncertainties in the long-term land-atmosphere C-balance. Though results of this study are specific to LM3V, the processes that characterize this model are not completely divorced from other DGVMs (or reality), and our approach provides valuable insights into how data can be leveraged to be better

  16. Evaluation of organic and inorganic amendments on maize growth and uptake of cd and zn from contaminated paddy soils.

    PubMed

    Putwattana, Narupot; Kruatrachue, Maleeya; Kumsopa, Acharaporn; Pokethitiyook, Prayad

    2015-01-01

    Pot and field experiments were conducted to investigate the effects of soil amendments (cow manure, rice straw, zeolite, dicalcium phosphate) on the growth and metal uptake (Cd, Zn) of maize (Zea mays) grown in Cd/Zn contaminated soil. The addition of cow manure and rice straw significantly increased the dry biomass, shoot and root length, and grain yield of maize when compared with the control. In pot study, cow manure, rice straw, and dicalcium phosphate all proved effective in reducing Cd and Zn concentrations in shoots and roots. Cd and Zn concentrations in the grains of maize grown in field study plots with cow manure and dicalcium phosphate amendments to highly contaminated soil (Cd 36.5 mg kg(-1) and Zn 1520.8 mg kg(-1)) conformed to acceptable standards for animal feed. Additionally both cow manure and dicalcium phosphate amendments resulted in the significant decrease of Cd and Zn concentrations in shoots of maize.

  17. Sea spray geoengineering can reduce ocean net primary productivity and carbon uptake

    NASA Astrophysics Data System (ADS)

    Partanen, Antti-Ilari; Keller, David; Korhonen, Hannele; Matthews, Damon

    2016-04-01

    contrast to previous studies on geoengineering and carbon cycle, geoengineering decreased the ocean carbon uptake during the whole 21st century. Even though carbon export into deep ocean was increased due to geoengineering, the upper ocean was gaining carbon at a lower rate than in CTRL. The exact reasons why cooling climate (compared to CTRL) did not increase ocean carbon uptake also in the upper ocean in any part of the simulation require more investigation. Our results imply that dynamics between radiation, carbon cycle, and ocean need to be considered to understand the effects of sea spray geoengineering on the marine ecosystems and carbon uptake. Considering only the reduced sunlight for marine ecosystems would lead to a strong underestimation of the impacts.

  18. Decomposition of climate change effects on ocean natural and anthropogenic carbon uptake.

    NASA Astrophysics Data System (ADS)

    Bernardello, Raffaele; Marinov, Irina; Palter, Jaime; Sarmiento, Jorge; Galbraith, Eric

    2013-04-01

    The ocean has been the only net sink of anthropogenic CO2 over the last 200 years, removing more than 30% of emitted anthropogenic carbon [Sabine et al., 2004]. The Southern Ocean accounts for up to half of this sink through the formation of various bottom, intermediate and mode water masses [Gruber et al., 2009]. Therefore, understanding the full range of global warming's possible consequences for the Earth system hinges on an understanding of the Southern Ocean's continued ability to serve as a carbon sink in the future. Many of the physical processes that are crucial to ocean carbon uptake and storage are expected to change under warming conditions, with consequences that are difficult to predict. The recent observed increase in the strength of the Southern Ocean Westerlies might enhance the anthropogenic carbon uptake through a more vigorous vertical mixing. However, this could also cause a decrease in natural carbon storage with a compensating effect. On the other hand, projected changes in buoyancy fluxes are expected to work in the opposite direction leading to a reduction of the vertical mixing. Finally, CO2 solubility at the sea surface will be affected by changes in temperature and salinity. We use a coupled atmosphere-ocean model (CM2Mc, Gallbraith et al., 2011) to perform a series of modeling experiments aimed to quantify the separate impact of these mechanisms on the various processes responsible for the functioning of the ocean carbon pumps. The experiments are based on the IPCC rcp8.5 scenario for the 21st century climate and consist in a combination of perturbations in which only one of the forcing factors is varying. This approach allows us to evaluate the relative importance of each process on the ability of the ocean to store carbon through the solubility and biological pumps. We also discuss the future climate projected changes in the relative importance of the Southern Ocean with respect to the global Ocean, for the total carbon uptake

  19. Basalt Weathering, Nutrient Uptake, And Carbon Release By An Exotic And A Native Arizona Grass Species Under Different Temperature Conditions

    NASA Astrophysics Data System (ADS)

    Gallas, G.; Dontsova, K.; Chorover, J.; Hunt, E.; Ravi, S.

    2010-12-01

    basalt weathering. All of the leachate samples showed higher pH than the input water, and the pH was elevated in treatments that contained grass. This indicated that in the presence of vegetation there was more proton absorption. The trends in total nitrogen concentrations indicate a dependence on temperature; the same can be said of anion concentrations. Anion leaching is lower at higher temperatures possibly due to greater plant uptake. Both organic and inorganic carbon concentrations were found to be higher in grass treatments than in control treatments. Because both dissolved CO2 and soluble organic exudates encourage mineral dissolution, this could be causative of the weathering enhancements observed. Denudation of nutrient elements differed between plant species and between temperatures, possibly relating to plant uptake and secondary mineral formation. This study gives unique insight into plant-mineral interactions as a function of plant species and temperature that is essential for understanding Earth systems under changing climate.

  20. Tailoring the Pore Environment of Metal-Organic and Molecular Materials Decorated with Inorganic Anions: Platforms for Highly Selective Carbon Capture

    NASA Astrophysics Data System (ADS)

    Nugent, Patrick S.

    Due to their high surface areas and structural tunability, porous metal-organic materials, MOMs, have attracted wide research interest in areas such as carbon capture, as the judicious choice of molecular building block (MBB) and linker facilitates the design of MOMs with myriad topologies and allows for a systematic variation of the pore environment. Families of MOMs with modular components, i.e. MOM platforms, are eminently suitable for targeting the selective adsorption of guest molecules such as CO2 because their pore size and pore functionality can each be tailored independently. MOMs with saturated metal centers (SMCs) that promote strong yet reversible CO2 binding in conjunction with favorable adsorption kinetics are an attractive alternative to MOMs containing unsaturated metal centers (UMCs) or amines. Whereas MOMs with SMCs and exclusively organic linkers typically have poor CO2 selectivity, it has been shown that a versatile, long known platform with SMCs, pillared square grids with inorganic anion pillars and pcu topology, exhibits high and selective CO 2 uptake, a moderate CO2 binding affinity, and good stability under practical conditions. As detailed herein, the tuning of pore size and pore functionality in this platform has modulated the CO2 adsorption properties and revealed variants with unprecedented selectivity towards CO 2 under industrially relevant conditions, even in the presence of moisture. With the aim of tuning pore chemistry while preserving pore size, we initially explored the effect of pillar substitution upon the carbon capture properties of a pillared square grid, [Cu(bipy)2(SiF6)] (SIFSIX-1-Cu). Room temperature CO2, CH4, and N 2 adsorption isotherms revealed that substitution of the SiF6 2- ("SIFSIX") inorganic pillar with TiF6 2- ("TIFSIX") or SnF62- ("SNIFSIX") modulated CO2 uptake, CO2 affinity (heat of adsorption, Qst), and selectivity vs. CH4 and N2. TIFSIX-1-Cu and SNIFSIX-1-Cu were calculated to exhibit the highest CO2/N 2

  1. Soil uptake of carbon monoxide emitted in the exhaust of a gasoline-powered engine.

    PubMed

    Tilley, David R; Mentzer, Jeff

    2006-02-01

    Carbon monoxide (CO) poses dangers to both human and environmental health, sickening thousands of people annually in the United States and decreasing the capacity of the atmosphere to oxidize greenhouse gases. Globally, soil ecosystems with their populations of bacteria, fungi, and algae are estimated to remove 9-36% of total CO emissions, which makes them the second largest CO sink after hydroxyl oxidation. Our aim was determine whether soil ecosystems could remove CO from an atmosphere mixed with gasoline-powered engine exhaust. Sealed microcosms containing no soil (NoSoil), nonvegetated soil (Soil), or vegetated soil (Soil+Veg), were exposed to 800, 100, and 50 ppm of CO for 1 hr. The uptake rate of CO was found to be higher at the 800 ppm level suggesting first-order rate kinetics. Soil+Veg exhibited a significantly higher CO uptake rate than either Soil or NoSoil (P<0.05), and Soil exhibited significantly higher uptake than NoSoil (P<0.05). As a free ecosystem service, the uptake of CO by soil ecosystems needs to be properly valued and ecologically engineered into the urban traffic network in a manner analogous to how wetlands, vegetated swales, and other ecologically based storm water treatment systems have improved urban runoff.

  2. Root exudates stimulate the uptake and metabolism of organic carbon in germinating spores of Glomus intraradices.

    PubMed

    Bücking, Heike; Abubaker, Jehad; Govindarajulu, Manjula; Tala, Marie; Pfeffer, Philip E; Nagahashi, Gerald; Lammers, Peter; Shachar-Hill, Yair

    2008-01-01

    * Root exudates play a key role during the presymbiotic growth phase and have been shown to stimulate hyphal branching and the catabolic metabolism of arbuscular mycorrhizal (AM) fungal spores. * Here, the effect of root exudates on presymbiotic growth, uptake of exogenous carbon and transcript levels for genes putatively involved in the carbon metabolism of germinating spores were determined. * Crude root exudates led to a slight acceleration of spore germination, increased germ tube branching and stimulated uptake and catabolic metabolism of acetate, and to a greater extent of glucose, but had no effect on gene expression. By contrast, partially purified root exudates increased the transcript levels of acyl-CoA dehydrogenase (ss-oxidation of fatty acids to acetyl-CoA), malate synthase (glyoxylate cycle) and glutamine-fructose-6-phosphate aminotransferase (chitin biosynthesis), but did not differ from crude root exudates in their effect on substrate uptake and respiration. The expression of glycogen synthase (glycogen biosynthesis), glucose-6-phosphate dehydrogenase (pentose phosphate pathway) and neutral trehalase (hydrolysis of trehalose) were only marginally or not affected by root exudates. * Root exudates have an effect on both membrane activity and gene expression and the results are discussed in relation to the catabolic and anabolic metabolism of spores during presymbiotic growth.

  3. Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis.

    PubMed

    Fellbaum, Carl R; Gachomo, Emma W; Beesetty, Yugandhar; Choudhari, Sulbha; Strahan, Gary D; Pfeffer, Philip E; Kiers, E Toby; Bücking, Heike

    2012-02-14

    The arbuscular mycorrhizal (AM) symbiosis, formed between the majority of land plants and ubiquitous soil fungi of the phylum Glomeromycota, is responsible for massive nutrient transfer and global carbon sequestration. AM fungi take up nutrients from the soil and exchange them against photosynthetically fixed carbon (C) from the host. Recent studies have demonstrated that reciprocal reward strategies by plant and fungal partners guarantee a "fair trade" of phosphorus against C between partners [Kiers ET, et al. (2011) Science 333:880-882], but whether a similar reward mechanism also controls nitrogen (N) flux in the AM symbiosis is not known. Using mycorrhizal root organ cultures, we manipulated the C supply to the host and fungus and followed the uptake and transport of N sources in the AM symbiosis, the enzymatic activities of arginase and urease, and fungal gene expression in the extraradical and intraradical mycelium. We found that the C supply of the host plant triggers the uptake and transport of N in the symbiosis, and that the increase in N transport is orchestrated by changes in fungal gene expression. N transport in the symbiosis is stimulated only when the C is delivered by the host across the mycorrhizal interface, not when C is supplied directly to the fungal extraradical mycelium in the form of acetate. These findings support the importance of C flux from the root to the fungus as a key trigger for N uptake and transport and provide insight into the N transport regulation in the AM symbiosis.

  4. Comparison of Inorganic Carbon System Parameters Measured in the Atlantic Ocean from 1990 to 1998 and Recommended Adjustments

    SciTech Connect

    Wanninkhof, R.

    2003-05-21

    As part of the global synthesis effort sponsored by the Global Carbon Cycle project of the National Oceanic and Atmospheric Administration (NOAA) and U.S. Department of Energy, a comprehensive comparison was performed of inorganic carbon parameters measured on oceanographic surveys carried out under auspices of the Joint Global Ocean Flux Study and related programs. Many of the cruises were performed as part of the World Hydrographic Program of the World Ocean Circulation Experiment and the NOAA Ocean-Atmosphere Carbon Exchange Study. Total dissolved inorganic carbon (DIC), total alkalinity (TAlk), fugacity of CO{sub 2}, and pH data from twenty-three cruises were checked to determine whether there were systematic offsets of these parameters between cruises. The focus was on the DIC and TAlk state variables. Data quality and offsets of DIC and TAlk were determined by using several different techniques. One approach was based on crossover analyses, where the deep-water concentrations of DIC and TAlk were compared for stations on different cruises that were within 100 km of each other. Regional comparisons were also made by using a multiple-parameter linear regression technique in which DIC or TAlk was regressed against hydrographic and nutrient parameters. When offsets of greater than 4 {micro}mol/kg were observed for DIC and/or 6 {micro}mol/kg were observed for TAlk, the data taken on the cruise were closely scrutinized to determine whether the offsets were systematic. Based on these analyses, the DIC data and TAlk data of three cruises were deemed of insufficient quality to be included in the comprehensive basinwide data set. For several of the cruises, small adjustments in TAlk were recommended for consistency with other cruises in the region. After these adjustments were incorporated, the inorganic carbon data from all cruises along with hydrographic, chlorofluorocarbon, and nutrient data were combined as a research quality product for the scientific community.

  5. Mechanistic controls of surface warming by ocean heat and carbon uptake: Experiments using idealised ocean models with and without overturning

    NASA Astrophysics Data System (ADS)

    Katavouta, Anna; Williams, Richard; Goodwin, Philip

    2017-04-01

    Transient climate response to emissions (TCRE) is an empirically derived index that relates global surface warming to cumulative carbon emissions in Earth system models. TCRE is nearly constant (i.e. surface warming is proportional to carbon emissions), and independent of the emissions pathway and model complexity, for reasons that are not yet fully understood. In our view, this proportionality is driven by ocean ventilation. To explore the link between TCRE and ocean heat and carbon uptake, we use an idealised 1-D atmosphere-ocean model with three layers (i.e., atmosphere, ocean mixed layer, interior ocean) with or without circulation. The model is forced using idealised carbon emission scenarios and drives the temperature and carbon concentration for each layer. The experiments reveal that an increase in carbon emissions eventually leads to ocean declining heat uptake, which causes the dependence of surface warming on radiative forcing from anthropogenic carbon to increase with time. In contrast, an increase in carbon emissions amplifies the ocean carbon uptake which acts to decrease the dependence of radiative forcing on carbon emissions. These two partially compensating effects lead to the nearly linear dependence between surface temperature and cumulative carbon emissions. The linear dependence holds in experiments with and without circulation. However, the TCRE value depends on the circulation and associated ventilation of heat and carbon. Hence, differences in circulation patterns amongst climate models may be responsible for the spread in their response.

  6. Climatological variations of total alkalinity and total dissolved inorganic carbon in the Mediterranean Sea surface waters

    NASA Astrophysics Data System (ADS)

    Gemayel, E.; Hassoun, A. E. R.; Benallal, M. A.; Goyet, C.; Rivaro, P.; Abboud-Abi Saab, M.; Krasakopoulou, E.; Touratier, F.; Ziveri, P.

    2015-12-01

    A compilation of data from several cruises between 1998 and 2013 was used to derive polynomial fits that estimate total alkalinity (AT) and total dissolved inorganic carbon (CT) from measurements of salinity and temperature in the Mediterranean Sea surface waters. The optimal equations were chosen based on the 10-fold cross-validation results and revealed that second- and third-order polynomials fit the AT and CT data respectively.