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Sample records for ionized tetrahydrofuran studied

  1. Study of Electron Ionization and Fragmentation of Non-hydrated and Hydrated Tetrahydrofuran Clusters

    NASA Astrophysics Data System (ADS)

    Neustetter, Michael; Mahmoodi-Darian, Masoomeh; Denifl, Stephan

    2017-05-01

    Mass spectroscopic investigations on tetrahydrofuran (THF, C4H8O), a common model molecule of the DNA-backbone, have been carried out. We irradiated isolated THF and (hydrated) THF clusters with low energy electrons (electron energy 70 eV) in order to study electron ionization and ionic fragmentation. For elucidation of fragmentation pathways, deuterated TDF (C4D8O) was investigated as well. One major observation is that the cluster environment shows overall a protective behavior on THF. However, also new fragmentation channels open in the cluster. In this context, we were able to solve a discrepancy in the literature about the fragment ion peak at mass 55 u in the electron ionization mass spectrum of THF. We ascribe this ion yield to the fragmentation of ionized THF clusters.

  2. Study of Electron Ionization and Fragmentation of Non-hydrated and Hydrated Tetrahydrofuran Clusters

    NASA Astrophysics Data System (ADS)

    Neustetter, Michael; Mahmoodi-Darian, Masoomeh; Denifl, Stephan

    2017-03-01

    Mass spectroscopic investigations on tetrahydrofuran (THF, C4H8O), a common model molecule of the DNA-backbone, have been carried out. We irradiated isolated THF and (hydrated) THF clusters with low energy electrons (electron energy 70 eV) in order to study electron ionization and ionic fragmentation. For elucidation of fragmentation pathways, deuterated TDF (C4D8O) was investigated as well. One major observation is that the cluster environment shows overall a protective behavior on THF. However, also new fragmentation channels open in the cluster. In this context, we were able to solve a discrepancy in the literature about the fragment ion peak at mass 55 u in the electron ionization mass spectrum of THF. We ascribe this ion yield to the fragmentation of ionized THF clusters.

  3. An (e, 2e + ion) study of low-energy electron-impact ionization and fragmentation of tetrahydrofuran with high mass and energy resolutions

    SciTech Connect

    Ren, Xueguang Pflüger, Thomas; Weyland, Marvin; Baek, Woon Yoon; Rabus, Hans; Ullrich, Joachim; Dorn, Alexander

    2014-10-07

    We study the low-energy (E{sub 0} = 26 eV) electron-impact induced ionization and fragmentation of tetrahydrofuran using a reaction microscope. All three final-state charged particles, i.e., two outgoing electrons and one fragment ion, are detected in triple coincidence such that the momentum vectors and, consequently, the kinetic energies for charged reaction products are determined. The ionic fragments are clearly identified in the experiment with a mass resolution of 1 amu. The fragmentation pathways of tetrahydrofuran are investigated by measuring the ion kinetic energy spectra and the binding energy spectra where an energy resolution of 1.5 eV has been achieved using the recently developed photoemission electron source. Here, we will discuss the fragmentation reactions for the cations C{sub 4}H{sub 8}O{sup +}, C{sub 4}H{sub 7}O{sup +}, C{sub 2}H{sub 3}O{sup +}, C{sub 3}H{sub 6}{sup +}, C{sub 3}H{sub 5}{sup +}, C{sub 3}H{sub 3}{sup +}, CH{sub 3}O{sup +}, CHO{sup +}, and C{sub 2}H{sub 3}{sup +}.

  4. An (e, 2e + ion) study of low-energy electron-impact ionization and fragmentation of tetrahydrofuran with high mass and energy resolutions.

    PubMed

    Ren, Xueguang; Pflüger, Thomas; Weyland, Marvin; Baek, Woon Yoon; Rabus, Hans; Ullrich, Joachim; Dorn, Alexander

    2014-10-07

    We study the low-energy (E0 = 26 eV) electron-impact induced ionization and fragmentation of tetrahydrofuran using a reaction microscope. All three final-state charged particles, i.e., two outgoing electrons and one fragment ion, are detected in triple coincidence such that the momentum vectors and, consequently, the kinetic energies for charged reaction products are determined. The ionic fragments are clearly identified in the experiment with a mass resolution of 1 amu. The fragmentation pathways of tetrahydrofuran are investigated by measuring the ion kinetic energy spectra and the binding energy spectra where an energy resolution of 1.5 eV has been achieved using the recently developed photoemission electron source. Here, we will discuss the fragmentation reactions for the cations C4H8O(+), C4H7O(+), C2H3O(+), C3H6(+), C3H5(+), C3H3(+), CH3O(+), CHO(+), and C2H3(+).

  5. Tetrahydrofuran

    Integrated Risk Information System (IRIS)

    DRAFT - DO NOT CITE OR QUOTE EPA / 635 / R - 11 / 006D www.epa.gov / iris TOXICOLOGICAL REVIEW OF TETRAHYDROFURAN ( CAS No . 109 - 99 - 9 ) In Support of Summary Information on the Integrated Risk Information System ( IRIS ) July 2011 NOTICE This document is a Final Agency Review / Interagency Scien

  6. Cross sections for ionization of tetrahydrofuran by protons at energies between 300 and 3000 keV

    NASA Astrophysics Data System (ADS)

    Wang, Mingjie; Rudek, Benedikt; Bennett, Daniel; de Vera, Pablo; Bug, Marion; Buhr, Ticia; Baek, Woon Yong; Hilgers, Gerhard; Rabus, Hans

    2016-05-01

    Double-differential cross sections for ionization of tetrahydrofuran by protons with energies from 300 to 3000 keV were measured at the Physikalisch-Technische Bundesanstalt ion accelerator facility. The electrons emitted at angles between 15∘ and 150∘ relative to the ion-beam direction were detected with an electrostatic hemispherical electron spectrometer. Single-differential and total ionization cross sections have been derived by integration. The experimental results are compared to the semiempirical Hansen-Kocbach-Stolterfoht model as well as to the recently reported method based on the dielectric formalism. The comparison to the latter showed good agreement with experimental data in a broad range of emission angles and energies of secondary electrons. The scaling property of ionization cross sections for tetrahydrofuran was also investigated. Compared to molecules of different size, the ionization cross sections of tetrahydrofuran were found to scale with the number of valence electrons at large impact parameters.

  7. Pseudorotation motion in tetrahydrofuran: an ab initio study.

    PubMed

    Rayón, Víctor M; Sordo, Jose A

    2005-05-22

    The use of different models based on experimental information about the observed level splitings, rotational constants, and far-infrared transition frequencies leads to different predictions on the equilibrium geometry for tetrahydrofuran. High-level ab initio calculations [coupled cluster singles, doubles (triples)/complete basis set (second order Moller-Plesset triple, quadrupole, quintuple)+zero-point energy(anharmonic)] suggest that the equilibrium conformation of tetrahydrofuran is an envelope C(s) structure. The theoretical geometrical parameters might be helpful to plan further microwave spectroscopic studies in order to get a physical interpretation of the measurements.

  8. Theoretical and experimental quantification of doubly and singly differential cross sections for electron-induced ionization of isolated tetrahydrofuran molecules

    SciTech Connect

    Champion, Christophe; Quinto, Michele A.; Bug, Marion U.; Baek, Woon Y.; Weck, Philippe F.

    2014-07-29

    Electron-induced ionization of the commonly used surrogate of the DNA sugar-phosphate backbone, namely, the tetrahydrofuran molecule, is here theoretically described within the 1st Born approximation by means of quantum-mechanical approach. Comparisons between theory and recent experiments are reported in terms of doubly and singly differential cross sections.

  9. Theoretical and experimental quantification of doubly and singly differential cross sections for electron-induced ionization of isolated tetrahydrofuran molecules

    DOE PAGES

    Champion, Christophe; Quinto, Michele A.; Bug, Marion U.; ...

    2014-07-29

    Electron-induced ionization of the commonly used surrogate of the DNA sugar-phosphate backbone, namely, the tetrahydrofuran molecule, is here theoretically described within the 1st Born approximation by means of quantum-mechanical approach. Comparisons between theory and recent experiments are reported in terms of doubly and singly differential cross sections.

  10. Inhalation developmental toxicology studies: Teratology study of tetrahydrofuran in mice and rats: Final report

    SciTech Connect

    Mast, T.J.; Evanoff, J.J.; Stoney, K.H.; Westerberg, R.B.; Rommereim, R.L.; Weigel, R.J.

    1988-08-01

    Tetrahydrofuran (THF), a four-carbon cyclic ether, is widely used as an industrial solvent. Although it has been used in large quantities for many years, few long-term toxicology studies, and no reproductive or developmental studies, have been conducted on THF. This study addresses the potential for THF to cause developmental toxicity in rodents by exposing Sprague-Dawley rats and Swiss (CD-1) mice to 0, 600, 1800, or 5000 ppm tetrahydrofuran (THF) vapors, 6 h/day, 7 dy/wk. Each treatment group consisted of 10 virgin females (for comparison), and approx.33 positively mated rats or mice. Positively mated mice were exposed on days 6--17 of gestation (dg), and rats on 6--19 dg. The day of plug or sperm detection was designated as O dg. Body weights were obtained throughout the study period, and uterine and fetal body weights were obtained at sacrifice (rats, 20 dg; mice, 18 dg). Implants were enumerated and their status recorded and live fetuses were examined for gross, visceral, skeletal, and soft-tissue craniofacial defects. 27 refs., 6 figs., 23 tabs.

  11. Transcriptomics and proteomic studies reveal acaricidal mechanism of octadecanoic acid-3, 4 - tetrahydrofuran diester against Sarcoptes scabiei var. cuniculi

    PubMed Central

    Song, Xu; Chen, Zhenzhen; Jia, Renyong; Cao, Mei; Zou, Yuanfeng; Li, Lixia; Liang, Xiaoxia; Yin, Lizi; He, Changliang; Yue, Guizhou; Yin, Zhongqiong

    2017-01-01

    In our previous study, a new compound, octadecanoic acid-3, 4-tetrahydrofuran diester, possessing potent acaricidal activity was obtained from neem oil. This study performed RNA-seq transcriptomics and iTRAQ proteomics to uncover the acaricidal mechanism of the compound against Sarcoptes scabiei var. cuniculi. The results of transcriptomics indicated that after treatment with octadecanoic acid-3, 4-tetrahydrofuran diester, genes related to “Energy metabolism” were significantly up-/down-regulated, including citrate cycle, oxidative phosphorylation pathway and fatty acid metabolism. Proteomics analysis showed accordant changes of proteins related to oxidative phosphorylation pathway. The target proteins of the compound were NADH dehydrogenase, Ubiquinol-cytochrome c reductase, Cytochrome c oxidase, ATP synthase, enolase and superoxide dismutase. In transcriptomics-proteomics correlation analysis, the concordance rate between protein abundances and their corresponding mRNAs was 57%, while others (43%) were discordant changes, suggesting divergent regulating effects of octadecanoic acid-3, 4-tetrahydrofuran diester. These results suggested that the acaricidal mechanism of octadecanoic acid-3, 4-tetrahydrofuran diester attributed to interference with energy metabolism, especially oxidative phosphorylation pathway. PMID:28361965

  12. Analytical validation applied to simultaneous determination of solvents dichloromethane (DCM), methyl isobutyl ketone (MIBK), tetrahydrofuran (THF) and toluene (TOL) in urine by headspace extraction and injection on chromatographic system with a flame ionization detector

    NASA Astrophysics Data System (ADS)

    Muna, E. D. M.; Pereira, R. P.

    2016-07-01

    The determination of the volatile organic solvents dichloromethane (DCM), methyl isobutyl ketone (MIBK), tetrahydrofuran (THF) and toluene (TOL) is applied on toxicological monitoring of employees in various industrial activities. The gas chromatography technique with flame ionization detector and headspace injection system has been applied. The analytical procedure developed allows the simultaneous determination of the above-mentioned solvents and the accuracy of the method was tested following the INMETRO guidelines through the DOQ-CGRE 008 Rev.04-July/2011.

  13. Observations related to tetrahydrofuran and methane hydrates for laboratory studies of hydrate-bearing sediments

    USGS Publications Warehouse

    Lee, J.Y.; Yun, T.S.; Santamarina, J.C.; Ruppel, C.

    2007-01-01

    The interaction among water molecules, guest gas molecules, salts, and mineral particles determines the nucleation and growth behavior of gas hydrates in natural sediments. Hydrate of tetrahydrofuran (THF) has long been used for laboratory studies of gas hydrate-bearing sediments to provide close control on hydrate concentrations and to overcome the long formation history of methane hydrate from aqueous phase methane in sediments. Yet differences in the polarizability of THF (polar molecule) compared to methane (nonpolar molecule) raise questions about the suitability of THF as a proxy for methane in the study of hydrate-bearing sediments. From existing data and simple macroscale experiments, we show that despite its polar nature, THF's large molecular size results in low permittivity, prevents it from dissolving precipitated salts, and hinders the solvation of ions on dry mineral surfaces. In addition, the interfacial tension between water and THF hydrate is similar to that between water and methane hydrate. The processes that researchers choose for forming hydrate in sediments in laboratory settings (e.g., from gas, liquid, or ice) and the pore-scale distribution of the hydrate that is produced by each of these processes likely have a more pronounced effect on the measured macroscale properties of hydrate-bearing sediments than do differences between THF and methane hydrates themselves.

  14. Observations related to tetrahydrofuran and methane hydrates for laboratory studies of hydrate-bearing sediments

    NASA Astrophysics Data System (ADS)

    Lee, J. Y.; Yun, T. S.; Santamarina, J. C.; Ruppel, C.

    2007-06-01

    The interaction among water molecules, guest gas molecules, salts, and mineral particles determines the nucleation and growth behavior of gas hydrates in natural sediments. Hydrate of tetrahydrofuran (THF) has long been used for laboratory studies of gas hydrate-bearing sediments to provide close control on hydrate concentrations and to overcome the long formation history of methane hydrate from aqueous phase methane in sediments. Yet differences in the polarizability of THF (polar molecule) compared to methane (nonpolar molecule) raise questions about the suitability of THF as a proxy for methane in the study of hydrate-bearing sediments. From existing data and simple macroscale experiments, we show that despite its polar nature, THF's large molecular size results in low permittivity, prevents it from dissolving precipitated salts, and hinders the solvation of ions on dry mineral surfaces. In addition, the interfacial tension between water and THF hydrate is similar to that between water and methane hydrate. The processes that researchers choose for forming hydrate in sediments in laboratory settings (e.g., from gas, liquid, or ice) and the pore-scale distribution of the hydrate that is produced by each of these processes likely have a more pronounced effect on the measured macroscale properties of hydrate-bearing sediments than do differences between THF and methane hydrates themselves.

  15. Experimental study on the effect of ammonia on the phase behavior of tetrahydrofuran clathrates.

    PubMed

    Vu, Tuan Hoang; Gloesener, Elodie; Choukroun, Mathieu; Ibourichene, Anaïs; Hodyss, Robert

    2014-11-26

    Clathrate hydrates, ice-like crystalline compounds in which small guest molecules are enclosed inside cages formed by tetrahedrally hydrogen-bonded water molecules, are naturally abundant on Earth and are generally expected to exist on icy celestial bodies. A prototypical example is Saturn's moon Titan, where dissociation of methane clathrates, a major crustal component, could contribute significantly to the replenishment of atmospheric methane. Ammonia is an important clathrate inhibiting agent that may be present (potentially at high concentrations) in Titan's interior. In this study, low-temperature Raman experiments are conducted to examine the dissociation point of tetrahydrofuran clathrates, an ambient-pressure analogue of methane clathrates, over a wide range of ammonia concentrations from 0 to 25 wt %. A phase diagram for the H2O-THF-NH3 system is generated, showing two main results: (i) ammonia lowers the dissociation point of clathrate hydrates to a similar extent compared to the melting of water ice and (ii) THF clathrate exhibits a "liquidus-like" behavior in the presence of ammonia, with a eutectic temperature of about 203.6 K. As temperatures higher than this estimated eutectic are anticipated within Titan's icy crust, these results imply that partial dissociation of clathrates can occur readily and may contribute to outgassing from the interior.

  16. Pervaporation study for the dehydration of tetrahydrofuran-water mixtures by polymeric and ceramic membranes.

    PubMed

    McGinness, Colleen A; Slater, C Stewart; Savelski, Mariano J

    2008-12-01

    Pervaporation technology can effectively separate a tetrahydrofuran (THF) solvent-water waste stream at an azeotropic concentration. The performance of a Sulzer 2210 polyvinyl alcohol (PVA) membrane and a Pervatech BV silica membrane were studied, as the operating variables feed temperature and permeate pressure, were varied. The silica membrane was found to exhibit a flux of almost double that of the PVA membrane, but both membranes had comparable separation ability in purifying the solvent-water mixture. At benchmark feed conditions of 96 wt% THF and 4 wt% water, 50 degrees C and 10 torr permeate pressure, the silica membrane flux was 0.276 kg/m(2)hr and selectivity was 365. For both membranes, flux was found to increase at an exponential rate as the feed temperature increased from 20 to 60 degrees C. The flux through the silica membrane increases at a 6% faster rate than the PVA membrane. Flux decreased as permeate pressure was increased from 5 to 25 torr for both membranes. The amount of water in the permeate decreased exponentially as the permeate pressure was increased, but increased linearly with increasing temperature. Optimum conditions for flux and selectivity are at low permeate pressure and high feed temperature. When a small amount of salt is added to the feed solution, an increase in flux is observed. Overall models for flux and permeate concentration were created from the experimental data. The models were used to predict scale-up performance in separating an azeotropic feed waste to produce dehydrated THF solvent for reuse and a permeate stream with a dilute THF concentration.

  17. Anisotropy in growth kinetics of tetrahydrofuran clathrate hydrate: a molecular dynamics study.

    PubMed

    Nada, Hiroki

    2009-04-09

    The growth kinetics of a tetrahydrofuran (THF) clathrate hydrate at the interface between the clathrate and an aqueous THF solution were investigated by means of a molecular dynamic simulation. The simulation was carried out for the interface of both the {100} and {111} planes of the THF clathrate. The simulation indicated the same anisotropic growth as that observed in real systems: the growth of the THF clathrate was much slower at the {111} interface than at the {100} interface. When the THF clathrate grew, THF molecules that were dissolved in the solution first were arranged at both large and small cage sites on the interface. Subsequently, the formation of cages by H(2)O molecules occurred in regions surrounded or sandwiched by those arranged THF molecules. As the formation of cages progressed, the THF molecules that had once been arranged at small cage sites gradually moved away from the sites, and finally the structure of the clathrate was completely formed. Simulation results strongly suggested that the rate-determining process for clathrate growth was the rearrangement of THF molecules at the interface from a disordered state to a state in which THF molecules were ideally arranged at large cage sites only. This rearrangement occurred much more slowly at the {111} interface than at the {100} interface, owing to the formation of a modified structure in which large and small cages were formed at opposite positions of the {111} interface. The anisotropic growth kinetics of the THF clathrate, which were obtained in this study, are consistent with the fact that growth shapes of THF clathrates in real systems are octahedral with flat {111} planes.

  18. Molecular dynamics study on the nucleation of methane + tetrahydrofuran mixed guest hydrate.

    PubMed

    Wu, Jyun-Yi; Chen, Li-Jen; Chen, Yan-Ping; Lin, Shiang-Tai

    2016-04-21

    The nucleation of methane (CH4), tetrahydrofuran (THF), and CH4 + THF hydrates are investigated by microsecond MD simulations. These three systems exhibit distinct structural developments in the aqueous phase quantified by the formation of cage structures of hydrogen bonded water molecules. The development of a cluster of cages in the CH4 system is limited by the scarce CH4 molecules in the solution, while in the THF system it is limited by the short lifetime of cages. In the CH4 + THF mixed guest system, a small cluster of caged CH4 molecules can be rapidly stabilized by abundant neighboring cages of THF molecules. Therefore, the induction time of the CH4 + THF mixed guest system is found to be significantly shorter than that of the pure CH4 and pure THF systems. Furthermore, the structure of cages found in the initially formed cage clusters are often different from the typical 5(12)6(n) (n = 0, 2, 3, 4) cages observed in clathrate hydrate systems. The cluster of cages may grow or transform into structure I or II clathrate hydrate in the later stages.

  19. Mechanistic Study of Tetrahydrofuran- acetogenins In Triggering Endoplasmic Reticulum Stress Response-apotoposis in Human Nasopharyngeal Carcinoma

    PubMed Central

    Juang, Shin-Hun; Chiang, Chang-Ying; Liang, Fong-Pin; Chan, Hsiu-Hui; Yang, Jai-Sing; Wang, Shih-Hao; Lin, Yu-Chin; Kuo, Ping-Chung; Shen, Meng-Ru; Thang, Tran Dinh; Nguyet, Bui Thi Minh; Kuo, Sheng-Chu; Wu, Tian-Shung

    2016-01-01

    For past three decades, numerous studies have elucidated the antiproliferative effects of acetogenins in hopes of developing a new class of clinical anticancer agents. However, clear and definitive action mechanisms of acetogenins were less clarified. In the present study, three tetrahydrofuran (THF)-containing acetogenins were found to have potent and selective antiproliferative activity against human nasopharyngeal carcinoma (NPC) cell lines and their methotrexate-resistant counterparts. The THF-containing acetogenins induced G2/M phase arrest, mitochondrial damage and apoptosis, and increased cytosolic and mitochondrial Ca2+ in NPCs. Microarray analysis of NPC-TW01 cells treated with squamostatin A, a non-adjacent bis-THF acetogenin, demonstrated an increased endoplasmic reticulum (ER)-stress response (ESR). Enhanced ESR in squamostatin A-treated cells was confirmed by real-time PCR, Western blot and shRNA gene knockdown experiments. Although our results showed that squamostatin A-induced ESR was independent of extracellular Ca2+, the presence of extracellular Ca2+ enhanced the antiproliferative effect of acetogenins. In vivo analyses demonstrated that squamostatin A showed good pharmacokinetic properties and significantly retarded NPC tumor growth in the xenograft mouse model. Conclusively, our work demonstrates that acetogenins are effective and selective inducers of the ESR that can block NPC proliferation, and illustrate a previously unappreciated antitumor mechanism of acetogenins that is effective against nasopharyngeal malignancies. PMID:28000792

  20. Acoustical studies of some derivatives of 1,5-benzodiazepines formamide and tetrahydrofuran solutions at 298.15 K

    NASA Astrophysics Data System (ADS)

    Baluja, S.; Movaliya, J.; Godvani, N.

    2009-12-01

    Some derivatives of 1,5-benzodiazepines have been synthesized and characterized by TLC, IR, NMR, and Mass Spectral data. The ultrasonic velocity, density and viscosity of these synthesized compounds have been measured in dimethyl formamide and tetrahydrofuran at 298.15 K. From these experimental data, various acoustical parameters such as isentropic compressibility, intermolecular free path length, molar compressibility, Rao’s molar sound function, relaxation strength, internal pressure, free volume etc., have been calculated which helps in understanding the molecular interactions occurring in these solutions.

  1. Inter- versus intra-molecular cyclization of tripeptides containing tetrahydrofuran amino acids: a density functional theory study on kinetic control.

    PubMed

    Kumar, N V Suresh; Priyakumar, U Deva; Singh, Harjinder; Roy, Saumya; Chakraborty, Tushar Kanti

    2012-07-01

    Density functional B3LYP method was used to investigate the preference of intra- and inter-molecular cyclizations of linear tripeptides containing tetrahydrofuran amino acids. Two distinct model pathways were conceived for the cyclization reaction, and all possible transition states and intermediates were located. Analysis of the energetics indicate intermolecular cyclization being favored by both thermodynamic and kinetic control. Geometric and NBO analyses were performed to explain the trends obtained along both the reaction pathways. Conceptual density functional theory-based reactive indices also show that reaction pathways leading to intermolecular cyclization of the tripeptides are relatively more facile compared to intramolecular cyclization.

  2. Design, Synthesis, Biological Evaluation and X-ray Structural Studies of HIV-1 Protease Inhibitors Containing Substituted Fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligands

    PubMed Central

    Ghosh, Arun K.; Martyr, Cuthbert D.; Kassekert, Luke A.; Nyalapatla, Prasanth R.; Steffey, Melinda; Agniswamy, Johnson; Wang, Yuan-Fang; Weber, Irene T.; Amano, Masayuki; Mitsuya, Hiroaki

    2015-01-01

    Design, synthesis, biological and X-ray crystallographic studies of a series of potent HIV-1 protease inhibitors are described. Various polar functionalities have been incorporated on the tetrahydropyranyl-tetrahydrofuran-derived P2 ligand to interact with the backbone atoms in the S2 subsite. The majority of the inhibitors showed very potent enzyme inhibitory and antiviral activity. Two high-resolution X-ray structures of 30b- and 30j-bound HIV-1 protease provide insight into ligand-binding site interactions. In particular, the polar functionalities on the P2 ligand appear to form unique hydrogen bonds with Gly48 amide NH and amide carbonyl groups in the flap region. PMID:26462551

  3. Low latitude middle atmosphere ionization studies

    NASA Technical Reports Server (NTRS)

    Bassi, J. P.

    1976-01-01

    Low latitude middle atmosphere ionization was studied with data obtained from three blunt conductivity probes and one Gerdien condenser. An investigation was conducted into the effects of various ionization sources in the 40 to 65 Km altitude range. An observed enhancement of positive ion conductivity taking place during the night can be explained by an atmsopheric effect, with cosmic rays being the only source of ionization only if the ion-ion recombination coefficient (alpha sub i) is small(10 to the -7 power cu cm/s) and varies greatly with altitude. More generally accepted values of alpha sub i ( approximately equal to 3x10 to the -7 power cu cm/s) require an additional source of ionization peaking at about 65 Km, and corresponding approximately to the integrated effect of an X-ray flux measured on a rocket flown in conjunction with the ionization measurements. The reasonable assumption of an alpha sub i which does not vary with altitude in the 50-70 Km range implies an even greater value alpha sub i and a more intense and harder X-ray spectrum.

  4. Study of collective effect in ionization cooling

    SciTech Connect

    Huang, D.; Ng, K.Y.; Roberts, T.J.; /MUONS Inc., Batavia

    2009-09-01

    As a charged particle passes through a non-gaseous medium, it polarizes the medium and induces wake fields behind it. Same thing happens in ionization cooling. The interaction with wake fields perturbs the stopping power of beam particles. The perturbation strongly depends on the densities of both the incident beam and the medium. To understand this collective effect, detailed studies have been carried out. Both analytic and simulation results are obtained and compared.

  5. Tetrahydrofuran hydrate decomposition characteristics in porous media

    NASA Astrophysics Data System (ADS)

    Song, Yongchen; Wang, Pengfei; Wang, Shenglong; Zhao, Jiafei; Yang, Mingjun

    2016-12-01

    Many tetrahydrofuran (THF) hydrate properties are similar to those of gas hydrates. In the present work THF hydrate dissociation in four types of porous media is studied. THF solution was cooled to 275.15 K with formation of the hydrate under ambient pressure, and then it dissociated under ambient conditions. THF hydrate dissociation experiments in each porous medium were conducted three times. Magnetic resonance imaging (MRI) was used to obtain images. Decomposition time, THF hydrate saturation and MRI mean intensity (MI) were measured and analyzed. The experimental results showed that the hydrate decomposition time in BZ-4 and BZ-3 was similar and longer than that in BZ-02. In each dissociation process, the hydrate decomposition time of the second and third cycles was shorter than that of the first cycle in BZ-4, BZ-3, and BZ-02. The relationship between THF hydrate saturation and time is almost linear.

  6. Multiphoton ionization studies of xenon clusters

    SciTech Connect

    Echt, O.; Cook, M.C.; Castleman, A.W.

    1987-04-03

    Non-resonant multiphoton ionization of xenon clusters has revealed the same magic numbers as found in the case of electron-impact ionization. Large dissociation rates are found for the trimer through pentamer ion, measured on a time scale of approx 10/sup -7/ s after ionization.

  7. Transition-metal triflate catalyzed unprecedented formation of oxime ketals of tetrahydrofuran via C-H functionalization

    NASA Astrophysics Data System (ADS)

    Shafi, Syed

    2015-02-01

    Benzaldehyde O-tetrahydrofuran-2-yl oximes were formed through the C-H functionalization from the reaction between benzaldoximes and aqueous tetrahydrofuran catalyzed by water tolerant transition metal triflates (Lewis acids). The formation of oxime ketal has been confirmed from 2D NMR analysis (HMBC and HSQC studies).

  8. 21 CFR 178.3950 - Tetrahydrofuran.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... provisions of this section. (a) It is used as a solvent in the casting of film from a solution of polymeric... copolymerized with one another in any combination, or it may be used as a solvent in the casting of film... of tetrahydrofuran in the film does not exceed 1.5 percent by weight of film....

  9. 21 CFR 178.3950 - Tetrahydrofuran.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... provisions of this section. (a) It is used as a solvent in the casting of film from a solution of polymeric... copolymerized with one another in any combination, or it may be used as a solvent in the casting of film... of tetrahydrofuran in the film does not exceed 1.5 percent by weight of film....

  10. 21 CFR 178.3950 - Tetrahydrofuran.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... solvent in the casting of film from a solution of polymeric resins of vinyl chloride, vinyl acetate, or..., or it may be used as a solvent in the casting of film prepared from vinyl chloride copolymers complying with § 177.1980 of this chapter. (b) The residual amount of tetrahydrofuran in the film does...

  11. 21 CFR 178.3950 - Tetrahydrofuran.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Tetrahydrofuran. 178.3950 Section 178.3950 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION (CONTINUED) INDIRECT FOOD ADDITIVES: ADJUVANTS, PRODUCTION AIDS, AND SANITIZERS Certain Adjuvants...

  12. 21 CFR 178.3950 - Tetrahydrofuran.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 3 2011-04-01 2011-04-01 false Tetrahydrofuran. 178.3950 Section 178.3950 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION (CONTINUED) INDIRECT FOOD ADDITIVES: ADJUVANTS, PRODUCTION AIDS, AND...

  13. Kinetic isotope effects and tunneling in cyclic double and triple proton transfer between acetic acid and methanol in tetrahydrofuran studied by dynamic /sup 1/H and /sup 2/H NMR spectroscopy

    SciTech Connect

    Gerritzen, D.; Limbach, H.H.

    1984-02-22

    Previous studies of proton exchange and hydrogen bonding between acetic acid (A) and methanol (B) in tetrahydrofuran-d/sub 8/ have been extended to the study of the primary kinetic H/D isotope effects of the exchange. For this purpose a new combination of dynamic /sup 1/H and /sup 2/H NMR spectroscopy has been used to perform an ''NMR proton inventory''. The following rate law was obtained at deuterium fractions D=0 and D=1 of the exchangeable protonic sites: NU=k/sup LL/ C/sub A/C/sub B/+k/sub LLL/C/sub A//sup 2/C/sub B/ (L=H,D). This was attributed to a superposition of cyclic double and triple proton exchange involving one and two molecules of acetic acid and one molecule of methanol. Additional experiments were carried out at intermediate deuterium fractions. Thus, the kinetic HH/HD/DD and HHH/HHD/DDD isotope effects of the exchange as a function of the temperature was measured successfully. This has been achieved for the first time for well-defined intermolecular multiple-proton-transfer reactions. The possibility of determining the number of protons transferred in a chemical reaction by performing an NMR proton inventory is discussed. The rule of the geometric mean (RGM) is fulfilled for the kinetic isotope effects of the LLL process, which are almost independent of temperature within the margin of error. By contrast, the RGM is not fullfilled for the LL process, and the kinetic isotope effects depend strongly on the temperature. The energies of activation and frequency factors fit Bell's criteria of tunneling. The kinetic results are in good agreement with predictions of transition-state theory but can be explained by an intermolecular tunneling model. The results are proof that acetic acid and methanol form cyclic hydrogen-bonded 1:1 and 2:1 complexes which have very low concentration in tetrahydrofuran.

  14. An efficient route towards a new branched tetrahydrofurane δ-sugar amino acid from a pyrolysis product of cellulose.

    PubMed

    Defant, Andrea; Mancini, Ines; Torri, Cristian; Malferrari, Danilo; Fabbri, Daniele

    2011-02-01

    (1R,5S)-1-hydroxy-3,6-dioxa-bicyclo[3.2.1]octan-2-one, is a bicyclic lactone obtained in gram-scale by catalytic pyrolysis of the renewable source cellulose. Now it has been used as a chiral building block in the preparation of the new δ-sugar amino acid, (3R,5S)-5-(aminoethyl)-3-hydroxytetrahydrofurane-3-carboxylic acid, by an efficient synthesis in five steps with a 67% overall yield. The structure of this tetrahydrofurane amino acid, isolated in protonated form, was assigned by extensive mono- and bidimensional (1)H- and (13)C-NMR analysis and mass spectrometry, including measurements by electrospray and matrix-assisted laser desorption ionization techniques, the latter one for high-resolution experiments. This amino acid is an isoster of dipeptide glycine-alanine (H-Gly-Ala-OH), with a potential use in the access of new peptidomimetics with conformationally restricted structures due to the presence of tetrahydrofurane ring. As a preliminary study in order to disclose this effect, density functional theory calculation performed in water using polar continuum model was applied to the new amino acid and H-Gly-Ala-OH dipeptide, so that to evaluate and compare the relative torsional angles for the energy-minimized structures.

  15. Simulation study of the ionizing front in the critical ionization velocity phenomenon

    NASA Technical Reports Server (NTRS)

    Machida, S.; Goertz, C. K.; Lu, G.

    1988-01-01

    The simulation of the critical ionization velocity for a neutral gas cloud moving across the static magnetic field is presented. A low-beta plasma is studied, using a two and a half-dimensional electrostatic code linked with the Plasma and Neutral Interaction Code (Goertz and Machida, 1987). The physics of the ionizing front and the instabilities which occur there are discussed. Results are presented from four numerical runs designed so that the effects of the charge separation field can be distinguished from the wave heating.

  16. IRIS Toxicological Review of Tetrahydrofuran (THF) (External ...

    EPA Pesticide Factsheets

    EPA is conducting a peer review and public comment of the scientific basis supporting the human health hazard and dose-response assessment of tetrahydrofuran (THF) that when finalized will appear on the Integrated Risk Information System (IRIS) database. EPA is undertaking an Integrated Risk Information System (IRIS) health assessment for tetrahydrofuran. IRIS is an EPA database containing Agency scientific positions on potential adverse human health effects that may result from chronic (or lifetime) exposure to chemicals in the environment. IRIS contains chemical-specific summaries of qualitative and quantitative health information in support of two steps of the risk assessment paradigm, i.e., hazard identification and dose-response evaluation. IRIS assessments are used in combination with specific situational exposure assessment information to evaluate potential public health risk associated with environmental contaminants.

  17. IRIS Toxicological Review of Tetrahydrofuran (THF) ...

    EPA Pesticide Factsheets

    EPA is releasing the draft report, Toxicological Review of Tetrahydrofuran, that was distributed to Federal agencies and White House Offices for comment during the Science Discussion step of the IRIS Assessment Development Process. Comments received from other Federal agencies and White House Offices are provided below with external peer review panel comments. EPA is undertaking an Integrated Risk Information System (IRIS) health assessment for tetrahydrofuran. IRIS is an EPA database containing Agency scientific positions on potential adverse human health effects that may result from chronic (or lifetime) exposure to chemicals in the environment. IRIS contains chemical-specific summaries of qualitative and quantitative health information in support of two steps of the risk assessment paradigm, i.e., hazard identification and dose-response evaluation. IRIS assessments are used in combination with specific situational exposure assessment information to evaluate potential public health risk associated with environmental contaminants.

  18. Structure and reactivity of lithium amides. /sup 6/Li, /sup 13/C, and /sup 15/N NMR spectroscopic studies and colligative measurements of lithium diphenylamide and lithium diphenylamide-lithium bromide complex solvated by tetrahydrofuran

    SciTech Connect

    DePue, J.S.; Collum, D.B.

    1988-08-03

    /sup 6/Li, /sup 13/C, and /sup 15/N NMR spectroscopic studies of lithium diphenylamide in THF/hydrocarbon solutions (THF = tetrahydrofuran) detected two different species. /sup 6/Li and /sup 15/N NMR spectroscopic studies of (/sup 6/Li, /sup 15/N)lithium diphenylamide showed the species observed at low THF concentrations to be a cyclic oligomer. Structural analogies provided strong support for a dimer while colligative measurements at 0/degrees/C indicated the dimer to be di- or trisolvated. On the basis of the observed mass action effects, the species appearing at intermediate THF concentrations is assigned as a contact or solvent-separated ion-paired monomer. Lithium diphenylamide forms a 1:1 adduct with lithium bromide at low THF concentrations. A combination of /sup 6/Li-/sup 15/N double labeling studies and colligative measurements supports a trisolvated cyclic mixed dimer structure. Although detailed spectroscopic studies at elevated THF concentrations were precluded by high fluctionality, the similarity of the /sup 13/C chemical shifts of lithium diphenylamide in the presence and absence of lithium bromide provide indirect evidence that the mixed dimer undergoes a THF concentration dependent dissociation to the monomeric amide and free lithium bromide. 24 references, 9 figures, 2 tables.

  19. (e,2e) ionization studies of diatomic & triatomic molecules

    NASA Astrophysics Data System (ADS)

    Nixon, Kate; Murray, Andrew; Kaiser, Christian; Al-Hagan, Ola; Colgan, James; Madison, Don

    2009-10-01

    (e,2e) studies yield the most detailed experimental data on electron impact ionization of atomic & molecular targets for comparison to quantum collision theories. Coincidence techniques are here used to measure the probability of ionization as a function of the incident electron scattering angle and angle of the electron ejected from the target. In Manchester we study this process at low energies, where the ionization probability is greatest & the interaction most complex. We recently considered ionization of simple molecules (eg H2 & H2O) from a coplanar geometry to the perpendicular plane[1-4], and have discovered the interaction is far more complex than for ionization of atoms [5]. We here present comparisons between theory & experiment, and discuss new methods we intend to implement to study ionization from laser-aligned atoms & molecules. References. [1] J Colgan et al Phys Rev Lett 101 233201 (2008) [2] O Al-Hagan et al Nature Physics 5 59 (2009) [3] J Colgan et al Phys Rev A 79 052704 (2009) [4] C Kaiser et al J Phys B 40 2563 (2007) [5] A J Murray et al J Phys B 36 4875 (2003) & references therein

  20. Theoretical electron impact total cross sections for tetrahydrofuran (C4H8O)

    NASA Astrophysics Data System (ADS)

    Swadia, Mohit; Thakar, Yogesh; Vinodkumar, Minaxi; Limbachiya, Chetan

    2017-04-01

    We report electron impact total cross sections for tetrahydrofuran (C4H8O) from ionization threshold to 5 keV. We have employed Spherical Complex Optical Potential (SCOP) to calculate total cross sections QT, total inelastic cross sections Qinel and total elastic cross sections Qel and have used Complex Scattering Potential - ionization contribution (CSP-ic) formalisms to compute total ionization cross sections Qion and summed total excitation cross sections ∑ Qexc. We have compared our cross sections with available experimental as well as theoretical results and have found good agreement wherever available. This is the maiden attempt to report the total excitation cross sections for this target. Contribution to the Topical Issue "Low-Energy Interactions related to Atmospheric and Extreme Conditions", edited by S. Ptasinska, M. Smialek-Telega, A. Milosavljevic, B. Sivaraman.

  1. Nurses and ionizing radiation: A study of two institutions

    SciTech Connect

    Miracle, V.A.; Wigginton, M.A.

    1990-05-01

    The results of this study revealed that the nurses studied were exposed to ionizing radiation at levels defined as safe. However, since the actual exposure level that increases health risks is unknown, it is recommended that critical care nurses take as many precautions as possible to minimize exposure that, over the long run, could have deleterious effects.

  2. Study of ambient air ionization with femtosecond laser pulses

    NASA Astrophysics Data System (ADS)

    Wang, Yi; Wang, Xiaolei; Zhang, Nan; Zhai, Hongchen; Zhu, Xiaonong

    2005-01-01

    The laser induced ionization of ambient air is studied experimentally with laser pulses whose durations range from 50 fs up to 10 ps at 800 nm. It is found that the minimum pulse energy for detectable air ionization follows the scaling law of ɛth varies direct as tpx, with 0.23 < x < 0.5, and x tends to rise for longer pulses within the range of 50 fs - 500 fs. For laser pulses from 0.7 ps to 10 ps, however, x is approximately equal to 0.8. The dependence of the critical intensity for air ionization on the beam spot size is also examined with a variety of focused laser beam spot sizes in the experiments.

  3. Trehalose promotes Rhodococcus sp. strain YYL colonization in activated sludge under tetrahydrofuran (THF) stress

    PubMed Central

    He, Zhixing; Zhang, Kai; Wang, Haixia; Lv, Zhenmei

    2015-01-01

    Few studies have focused on the role of compatible solutes in changing the microbial community structure in bioaugmentation systems. In this study, we investigated the influence of trehalose as a biostimulant on the microbial community in tetrahydrofuran (THF)-treated wastewater bioaugmentation systems with Rhodococcus sp. YYL. Functional gene profile changes were used to study the variation in the microbial community. Soluble di-iron monooxygenases (SDIMO), particularly group-5 SDIMOs (i.e., tetrahydrofuran and propane monooxygenases), play a significant role in the initiation of the ring cleavage of tetrahydrofuran. Group-5 SDIMOs genes are enriched upon trehalose addition, and exogenous tetrahydrofuran monooxygenase (thmA) genes can successfully colonize bioaugmentation systems. Cytochrome P450 monooxygenases (P450s) have a significant role in catalyzing the region- and stereospecific oxidation of non-activated hydrocarbons, and THF was reported to inhibit P450s in the environment. The CYP153 family was chosen as a representative P450 to study the inhibitory effects of THF. The results demonstrated that CYP153 family genes exhibited significant changes upon THF treatment and that trehalose helped maintain a rich diversity and high abundance of CYP153 family genes. Biostimulation with trehalose could alleviate the negative effects of THF stress on microbial diversity in bioaugmentation systems. Our results indicated that trehalose as a compatible solute plays a significant role for environmental strains under extreme conditions. PMID:26029182

  4. The effect of conformation on the ionization energetics of n-butylbenzene. I. A threshold ionization study

    NASA Astrophysics Data System (ADS)

    Tong, Xin; Ford, Mark S.; Dessent, Caroline E. H.; Müller-Dethlefs, Klaus

    2003-12-01

    Conformational isomers of the aromatic hydrocarbon n-butylbenzene have been studied using two-color REMPI (resonance enhanced multiphoton ionization) and MATI (mass analyzed threshold ionization) spectroscopy to explore the effect of conformation on ionization dynamics. Gauche- and anti-cationic conformers were selectively produced by two-color excitation via the respective S1 origins. Adiabatic ionization potentials of the gauche- and anti-conformations were determined to be 70 148 and 69 955±5 cm-1, respectively. Analysis of the REMPI and MATI spectra allowed the determination of the S0 (38 cm-1), S1 (100 cm-1), and D0 (-155 cm-1) gauche- and anti-conformer energy differences. Spectral features and vibrational modes are interpreted with the aid of MP2/cc-pVDZ ab initio calculations, and ionization-induced changes in the molecular conformations discussed.

  5. Predicting differential cross sections of electron scattering from tetrahydrofuran

    NASA Astrophysics Data System (ADS)

    Zhang, Lulu; Sun, Weiguo; Zhang, Yi; Fan, Zhixiang; Hu, Shide; Fan, Qunchao

    2017-04-01

    A difference algebraic converging method for electron scattering from molecule (DACMe) is suggested based on the recently proposed difference converging method (DCM) to predict unknown differential cross sections (DCSs). The applications of the DACMe to electron scattering from tetrahydrofuran (THF) molecule at energies below 20 eV show that: (1) the DACMe DCSs excellently reproduce all the available experimental data; (2) the DACMe method correctly predicts unknown DCSs that may not be given experimentally; (3) the DACMe can be used as an economic and useful alternative method to predict the correct DCSs where such scattering data are required; (4) the DACMe method does not depend on the size and the stereochemistry structure of a scattering molecule; (5) the algebraic modification to the DCM enhances the computational efficiency of the DCM theoretical study by at least 110 times.

  6. The study of the effects of ionizing and non-ionizing radiations on birth weight of newborns to exposed mothers

    PubMed Central

    Mortazavi, S. M. J.; Shirazi, K. R.; Mortazavi, G.

    2013-01-01

    Objectives: Life evolved in an environment filled with a wide variety of ionizing and non-ionizing radiation. It was previously reported that medical exposures to pregnant women increases the risk of low birth weight. This study intends to investigate the relationship between exposure to ionizing and non-ionizing radiation and the risk of low birth weight. Materials and Methods: One thousand two hundred mothers with their first-term labor (vaginal or cesarean) whose newborns’ history had been registered in neonates’ screening program in Shiraz were interviewed and surveyed. Data collection was performed by the assessment of mother's history of radiography before and during pregnancy, physical examination of the mother for height and weight and weighing and examining the newborn for any diagnosis of disease and anomalies. Results: There were no statistical significant differences between the mean weight of newborns whose mothers had been exposed to some common sources of ionizing and non-ionizing radiations such as dental or non dental radiographies, mobile phone, cordless phone and cathode ray tube (CRT) and those of non-exposed mothers. Conclusions: The findings of this study cast doubt on previous reports, which indicated that exposure to ionizing radiation during pregnancy increased the risk of low birth weight. PMID:23633865

  7. ECC study in positron impact ionization in molecular hydrogen

    NASA Astrophysics Data System (ADS)

    Campeanu, R. I.; Zohouri Haghian, N.

    2012-12-01

    The electron capture to the continuum phenomenon in positron impact ionization of molecular hydrogen is studied with the distorted wave Born approximation. Our theoretical model produces results which are in better agreement with the experiment than the more elaborate models of [J. Fiol, V.D. Rodriguez, R.O. Barrachina, J. Phys. B: At. Mol. Opt. Phys. 34, 933 (2001)] and [A. Benedek, R.I. Campeanu, J. Phys. B: At. Mol. Opt. Phys. 40, 1589 (2007)] previously employed in this study.

  8. Theoretical studies of photoexcitation and ionization in H2O

    NASA Technical Reports Server (NTRS)

    Diercksen, G. H. F.; Kraemer, W. P.; Rescigno, T. N.; Bender, C. F.; Mckoy, B. V.; Langhoff, S. R.; Langhoff, P. W.

    1982-01-01

    Theoretical studies using Franck-Condon and static-exchange approximations are reported for the complete dipole excitation and ionization spectrum in H2O, where (1) large Cartesian Gaussian basis sets are used to represent the required discrete and continuum electronic eigenfunctions at the ground state equilibrium geometry, and (2) previously devised moment-theory techniques are employed in constructing the continuum oscillator-strength densities from the calculated spectra. Comparisons are made of the calculated excitation and ionization profiles with recent experimental photoabsorption studies and corresponding spectral assignments, electron impact-excitation cross sections, and dipole and synchrotron-radiation studies of partial-channel photoionization cross sections. The calculated partial-channel cross sections are found to be atomic-like, and dominated by 2p-kd components. It is suggested that the latter transition couples with the underlying 1b(1)-kb(1) channel, accounting for a prominent feature in recent synchrotron-radiation measurements.

  9. Design of Gem-difluoro-bis-Tetrahydrofuran as P2-Ligand for HIV-1 Protease Inhibitors to Improve Brain Penetration: Synthesis, X-ray Studies, and Biological Evaluation

    PubMed Central

    Yashchuk, Sofiya; Mizuno, Akira; Chakraborty, Nilanjana; Agniswamy, Johnson; Wang, Yuan-Fang; Aoki, Manabu; Gomez, Pedro Miguel Salcedo; Amano, Masayuki; Weber, Irene T.; Mitsuya, Hiroaki

    2015-01-01

    Structure-based design, synthesis, biological evaluation and X-ray structural studies of fluorine containing HIV-1 protease inhibitors are described. The synthesis of both enantiomers of the gem-difluoro-bis-THF ligands was carried out in a stereoselective manner using a Reformatskii-Claisen reaction as the key step. Optically active ligands HIV-1LAI were converted to protease inhibitors. Two of these inhibitors (3 and 4) exhibited HIV-1 protease inhibitory Ki’s in picomolar range. Both inhibitors showed very potent antiviral activity with EC50 values of 0.8 nM and 3.1 nM respectively against the laboratory strain HIV-1LAI. Both inhibitors exhibited improved lipophilicity profiles compared to darunavir. Also, both inhibitors showed much improved blood-brain-barrier permeability in an in vitro model. A high resolution X-ray structure of inhibitor 4-bound HIV-1 protease was determined. The X-ray structure revealed that fluoro ligand makes extensive interactions with the HIV-1 protease S2 subsite, including hydrogen-bonding interactions with the protease backbone atoms. Also, both fluorine atoms on the bis-THF ligand formed strong interactions with the flap Gly48 carbonyl oxygen. PMID:25336073

  10. IRIS Toxicological Review of Tetrahydrofuran (Thf) (External Review Draft)

    EPA Science Inventory

    EPA is conducting a peer review and public comment of the scientific basis supporting the human health hazard and dose-response assessment of tetrahydrofuran (THF) that when finalized will appear on the Integrated Risk Information System (IRIS) database.

  11. IRIS Toxicological Review of Tetrahydrofuran (THF) (External Review Draft)

    EPA Science Inventory

    EPA is conducting a peer review and public comment of the scientific basis supporting the human health hazard and dose-response assessment of tetrahydrofuran (THF) that when finalized will appear on the Integrated Risk Information System (IRIS) database.

  12. Biodegradation Kinetics of Tetrahydrofuran, Benzene, Toluene, and Ethylbenzene as Multi-substrate by Pseudomonas oleovorans DT4

    PubMed Central

    Chen, Dong-Zhi; Ding, Yun-Feng; Zhou, Yu-Yang; Ye, Jie-Xu; Chen, Jian-Meng

    2014-01-01

    The biodegradation kinetics of tetrahydrofuran, benzene (B), toluene (T), and ethylbenzene (E) were systematically investigated individually and as mixtures by a series of aerobic batch degradation experiments initiated by Pseudomonas oleovorans DT4. The Andrews model parameters, e.g., maximum specific growth rates (μmax), half saturation, and substrate inhibition constant, were obtained from single-substrate experiments. The interaction parameters in the sum kinetics model (SKIP) were obtained from the dual substrates. The μmax value of 1.01 for tetrahydrofuran indicated that cell growth using tetrahydrofuran as carbon source was faster than the growth on B (μmax, B = 0.39) or T (μmax, T = 0.39). The interactions in the dual-substrate experiments, including genhancement, inhibition, and co-metabolism, in the mixtures of tetrahydrofuran with B or T or E were identified. The degradation of the four compounds existing simultaneously could be predicted by the combination of SKIP and co-metabolism models. This study is the first to quantify the interactions between tetrahydrofuran and BTE. PMID:25561017

  13. Resonant enhanced multiphoton ionization studies of atomic oxygen

    NASA Technical Reports Server (NTRS)

    Dixit, S. N.; Levin, D.; Mckoy, V.

    1987-01-01

    In resonant enhanced multiphoton ionization (REMPI), an atom absorbs several photons making a transition to a resonant intermediate state and subsequently ionizing out of it. With currently available tunable narrow-band lasers, the extreme sensitivity of REMPI to the specific arrangement of levels can be used to selectively probe minute amounts of a single species (atom) in a host of background material. Determination of the number density of atoms from the observed REMPI signal requires a knowledge of the multiphoton ionization cross sections. The REMPI of atomic oxygen was investigated through various excitation schemes that are feasible with available light sources. Using quantum defect theory (QDT) to estimate the various atomic parameters, the REMPI dynamics in atomic oxygen were studied incorporating the effects of saturation and a.c. Stark shifts. Results are presented for REMPI probabilities for excitation through various 2p(3) (4S sup o) np(3)P and 2p(3) (4S sup o) nf(3)F levels.

  14. Cleave and capture chemistry illustrated through bimetallic-induced fragmentation of tetrahydrofuran.

    PubMed

    Mulvey, Robert E; Blair, Victoria L; Clegg, William; Kennedy, Alan R; Klett, Jan; Russo, Luca

    2010-07-01

    The cleavage of ethers is commonly encountered in organometallic chemistry, although rarely studied in the context of new, emerging bimetallic reagents. Recently, it was reported that a bimetallic sodium-zinc base can deprotonate cyclic tetrahydrofuran under mild conditions without opening its heterocyclic (OC(4)) ring. In marked contrast to this synergic sedation, herein we show that switching to the more reactive sodium-magnesium or sodium-manganese bases promotes cleavage of at least six bonds in tetrahydrofuran, but uniquely the ring fragments are captured in separate crystalline complexes. Oxide fragments occupy guest positions in bimetallic, inverse crown ethers and C(4) fragments ultimately appear in bimetallated butadiene molecules. These results demonstrate the special synergic reactivity that can be executed by bimetallic reagents, which include the ability to capture and control, and thereby study, reactive fragments from sensitive substrates.

  15. Cleave and capture chemistry illustrated through bimetallic-induced fragmentation of tetrahydrofuran

    NASA Astrophysics Data System (ADS)

    Mulvey, Robert E.; Blair, Victoria L.; Clegg, William; Kennedy, Alan R.; Klett, Jan; Russo, Luca

    2010-07-01

    The cleavage of ethers is commonly encountered in organometallic chemistry, although rarely studied in the context of new, emerging bimetallic reagents. Recently, it was reported that a bimetallic sodium-zinc base can deprotonate cyclic tetrahydrofuran under mild conditions without opening its heterocyclic (OC4) ring. In marked contrast to this synergic sedation, herein we show that switching to the more reactive sodium-magnesium or sodium-manganese bases promotes cleavage of at least six bonds in tetrahydrofuran, but uniquely the ring fragments are captured in separate crystalline complexes. Oxide fragments occupy guest positions in bimetallic, inverse crown ethers and C4 fragments ultimately appear in bimetallated butadiene molecules. These results demonstrate the special synergic reactivity that can be executed by bimetallic reagents, which include the ability to capture and control, and thereby study, reactive fragments from sensitive substrates.

  16. Copper-catalyzed intramolecular alkene carboetherification: synthesis of fused-ring and bridged-ring tetrahydrofurans.

    PubMed

    Miller, Yan; Miao, Lei; Hosseini, Azade S; Chemler, Sherry R

    2012-07-25

    Fused-ring and bridged-ring tetrahydrofuran scaffolds are found in a number of natural products and biologically active compounds. A new copper-catalyzed intramolecular carboetherification of alkenes for the synthesis of bicyclic tetrahydrofurans is reported herein. The reaction involves Cu-catalyzed intramolecular addition of alcohols to unactivated alkenes and subsequent aryl C-H functionalization provides the C-C bond. Mechanistic studies indicate a primary carbon radical intermediate is involved and radical addition to the aryl ring is the likely C-C bond-forming mechanism. Preliminary catalytic enantioselective reactions are promising (up to 75% ee) and provide evidence that copper is involved in the alkene addition step, likely through a cis-oxycupration mechanism. Catalytic enantioselective alkene carboetherification reactions are rare and future development of this new method into a highly enantioselective process is promising. During the course of the mechanistic studies a protocol for alkene hydroetherification was also developed.

  17. Laser ionization/MS study of smog formation

    SciTech Connect

    Hewitt, A.D.; Lee, C.M.; Quimpo, B.C.

    1995-12-01

    Resonance-enhanced multiphoton ionization/time-of-flight mass spectrometry (REMPI/TOFMS) is a highly sensitive and selective technique which we are using to study atmospheric chemistry kinetics and reaction mechanisms. We are presently focusing our attention on toluene, the most abundant of the aromatic hydrocarbons in the troposphere, in order to understand the oxidation pathways which lead to smog formation. Our most recent results monitoring toluene and products of the OH + toluene reaction will be discussed, as well as our future plans to detect short-lived reaction intermediates, such as the methylhydroxycyclohexadienyl radical, formed by the addition of OH to the aromatic ring of toluene.

  18. Separation of tetrahydrofuran from aqueous mixtures by pervaporation

    SciTech Connect

    Mencarini, J. Jr.; Coppola, R.; Slater, C.S. )

    1994-02-01

    Studies on the separation of tetrahydrofuran (THF) and water by pervaporation were conducted. A silicalite-filled silicone composite membrane was used for organic permeation and a polyvinyl alcohol composite membrane for dehydration. Effects of feed concentration, feed temperature, permeate-side pressure, and type of membrane were studied. The silicone composite membrane yielded a selectivity of 205 and a THF flux of 1.1 kg m[sup 2][center dot]h at benchmark conditions of 50[degree]C feed temperature. 2 torr permeate-side pressure, and a feed concentration of 4.4% w/w THF. An increase in temperature increased the flux exponentially in an Arrhenius-type manner, but had little effect on selectivity. These data show that the trend agrees with an Arrhenius-type relationship. An increase in feed concentration increased the flux, but the selectivity for THF decreased. As the permeate-side pressure increased, the flux decreased in a sigmoidal fashion, but the selectivity for THF increased. Some initial studies on dehydration were also performed. Use of pervaporation in a solvent recovery reuse system in industry has also been examined. 22 refs., 10 figs.

  19. A Study of Muon Ionization Cooling at MICE

    SciTech Connect

    Sakamoto, Hideyuki

    2010-02-01

    A Neutrino Factory based on a high-energy muon storage-ring is proposed to study neutrino oscillation with high precision. An emittance reduction of muon beam by ionization cooling, which has never been demonstrated in practice, is one of the critical issues for Neutrino Factory. The international Muon Ionisation Cooling Experiment (MICE) is the first experiment to verify an effect of the ionization cooling with muons. MICE will measure a change in transverse emittance of approximately 10% with a precision of ±0.1%. In order to meet the requirements, muon trackers based on 350 μm diameter scintillating fibers have been proposed. The construction of such trackers is a very challenging task and some innovative techniques are needed to realize, since there have been no trackers made with such a small diameter of scintillating fibers in the world. Upstream and downstream SciFi trackers have been successfully constructed with the international collaboration of UK, US and Japan by 2008. Both of the trackers have been tested with cosmic-rays at the RAL by 2009, at which high tracking efficiencies more than 90% are measured for both trackers. It is also confirmed that by collecting the misalignments found in both of the trackers, the requirements for the emittance measurement is met.

  20. Study of the surface ionization detector for gas chromatography.

    PubMed

    Li, Weiwei; Wu, Dapeng; Chen, Shiheng; Peng, Hong; Guan, Yafeng

    2011-09-23

    The structure of the surface ionization detector (SID) and the operation parameters of GC-SID were investigated to reduce peak tailing and to enhance sensitivity. The performances of the GC-SID, including its repeatability, linearity, sensitivity, selectivity, and tolerance towards water vapor, were evaluated systematically. Compared with nitrogen-phosphorus detector (NPD), the SID was able to detect fg level triethylamine, and selectively respond to alkylamines, some anilines, and some nitrogen heterocyclic compounds. Among alkylamines, the SID sensitivity to diisobutylamine was rather small. Even so, it was also still 10 times higher than that on NPD. The SID selectivity, defined as the sensitivity ratio between triethylamine and various tested non-nitrogen compounds, was higher than 10(6). It was found that the SID is highly tolerant towards water vapor, allowing direct injection of water sample. Finally, the GC-SID was applied to directly measure trace amines in headspace gases of rotted meat and trace simazine in tap water. The SID sensitivity to simazine was proven to be 5 times higher than that on flame ionization detector (FID). This study suggests that the SID is a promising GC detector. Copyright © 2011 Elsevier B.V. All rights reserved.

  1. Thermodynamic Functions of Solvation of Hydrocarbons, Noble Gases, and Hard Spheres in Tetrahydrofuran-Water Mixtures.

    PubMed

    Sedov, I A; Magsumov, T I

    2015-07-16

    Thermodynamic solvation properties of mixtures of water with tetrahydrofuran at 298 K are studied. The Gibbs free energies and enthalpies of solvation of n-octane and toluene are determined experimentally. For molecular dynamics simulations of the binary solvent, we have modified a TraPPE-UA model for tetrahydrofuran and combined it with the SPC/E potential for water. The excess thermodynamic functions of neon, xenon, and hard spheres with two different radii are calculated using the particle insertion method. Simulated and real systems share the same characteristic trends for the thermodynamic functions. A maximum is present on dependencies of the enthalpy of solvation from the composition of solvent at 70-90 mol % water, making it higher than in both of the cosolvents. It is caused by a high enthalpy of cavity formation in the mixtures rich with water due to solvent reorganization around the cavity, which is shown by calculation of the enthalpy of solvation of hard spheres. Addition of relatively small amounts of tetrahydrofuran to water effectively suppresses the hydrophobic effect, leading to a quick increase of both the entropy and enthalpy of cavity formation and solvation of low polar molecules.

  2. Mid-infrared fiber-optic evanescent field spectroscopy for in situ monitoring of tetrahydrofuran hydrate formation and dissociation.

    PubMed

    Schwenk, M; Katzir, A; Mizaikoff, B

    2017-02-27

    Tetrahydrofuran is a relevant auxiliary molecule when storing carbon dioxide or hydrocarbons as gas hydrates. The present study demonstrates the application of in situ mid-infrared fiber-optic evanescent field absorption spectroscopy for studying the formation and dissociation of THF hydrates. Thereby, the utility of this analytical technique for providing unique molecular-level insight even under harsh environmental conditions is evidenced.

  3. IRIS Toxicological Review of Tetrahydrofuran (THF) (Interagency Science Discussion Draft)

    EPA Science Inventory

    EPA is releasing the draft report, Toxicological Review of Tetrahydrofuran, that was distributed to Federal agencies and White House Offices for comment during the Science Discussion step of the IRIS Assessment Development Proc...

  4. IRIS Toxicological Review of Tetrahydrofuran (THF) (Interagency Science Discussion Draft)

    EPA Science Inventory

    EPA is releasing the draft report, Toxicological Review of Tetrahydrofuran, that was distributed to Federal agencies and White House Offices for comment during the Science Discussion step of the IRIS Assessment Development Proc...

  5. IRIS Toxicological Review of Tetrahydrofuran (THF) (Final Report)

    EPA Science Inventory

    EPA has released the Toxicological Review of Tetrahydrofuran: in support of the Integrated Risk Information System (IRIS). Now final, this assessment may be used by EPA’s program and regional offices to inform decisions to protect human health.

  6. An Introduction to Multiphoton Ionization and Study of Ionization Rate of Hydrogen Atom

    SciTech Connect

    Shrestha, N.; Nakarmi, J. J.; Jha, L. N.

    2009-04-19

    From a semiclassical point of view, we discuss the problem of nonlinear interaction between electromagnetic radiation and atoms. The time-dependent Schroedinger equation for single electron systems is solved using perturbative technique to obtain transition probability. We also discuss higher order perturbation used in multiple processes where two or more quanta are emitted instead of a single photon. The approach is based on the assumption that the perturbation is small. From the transition probability ionization rate and absorption, the cross-section of hydrogen atoms is calculated. Variation in photon energy and field strength is analyzed. Variation of cross-section with photon energy is discussed.

  7. Ionization Study of Isomeric Molecules in Strong-field Laser Pulses

    NASA Astrophysics Data System (ADS)

    Zigo, Stefan; Le, Anh-Thu; Timilsina, Pratap; Trallero-Herrero, Carlos A.

    2017-02-01

    Through the use of the technique of time-of-flight mass spectroscopy, we obtain strong-field ionization yields for randomly oriented 1,2-dichloroethylene (1,2-DCE) (C2H2Cl2) and 2-butene (C4H8). We are interested in studying the effect of conformal structure in strong-field ionization and, in particular, the role of molecular polarity. That is, we can perform strong-field ionization studies in polar vs non-polar molecules that have the same chemical composition. We report our findings through the ionization yields and the ratio (trans/cis) of each stereoisomer pair as a function of intensity.

  8. Ionization efficiency studies for xenon ions with thesuperconducting ECR ion source VENUS

    SciTech Connect

    Leitner, Daniela; Lyneis, Claude M.; Todd, DamonS.; Tarvainen,Olli

    2007-06-05

    Ionization efficiency studies for high charge state xenon ions using a calibrated gas leak are presented. A 75% enriched {sup 129}Xe gas leak with a gas flow equivalent to 5.11p{mu}A was used in all the measurements. The experiments were performed at the VENUS (Versatile ECR ion source for Nuclear Science) ion source for 18 GHz, 28 GHz and double frequency operation. Overall, total ionization efficiencies close to 100% and ionization efficiencies into a single charge state up to 22% were measured. The influence of the biased disk on the ionization efficiency was studied and the results were somewhat surprising. When the biased disk was removed from the plasma chamber, the ionization efficiency was dramatically reduced for single frequency operation. However, using double frequency heating the ionization efficiencies achieved without the biased disk almost matched the ionization efficiencies achieved with the biased probe. In addition, we have studied the influence of the support gas on the charge state distribution of the xenon ions. Either pure oxygen or a mixture of oxygen and helium were used as support gases. The addition of a small amount of helium can increase the ionization efficiency into a single charge state by narrowing the charge state distribution. Furthermore by varying the helium flow the most efficient charge state can be shifted over a wide range without compromising the ionization efficiency. This is not possible using only oxygen as support gas. Results from these studies are presented and discussed.

  9. Single- and multi-photon ionization studies of organosulfur species

    SciTech Connect

    Cheung, Yu -San

    1999-02-12

    Accurate ionization energies (IE`s) for molecular species are used for prediction of chemical reactivity and are of fundamental importance to chemists. The IE of a gaseous molecule can be determined routinely in a photoionization or a photoelectron experiment. IE determinations made in conventional photoionization and photoelectron studies have uncertainties in the range of 3--100 meV (25--250 cm-1). In the past decade, the most exciting development in the field of photoionization and photoelectron spectroscopy has been the availability of high resolution, tunable ultraviolet (UV) and vacuum ultraviolet (VUV) laser sources. The laser pulsed field ionization photoelectron (PFI-PE) scheme is currently the state-of-the-art photoelectron spectroscopic technique and is capable of providing photoelectron energy resolution close to the optical resolution. The author has focused attention on the photoionization processes of some sulfur-containing species. The studies of the photoionization and photodissociation on sulfur-containing compounds [such as CS2, CH3SH, CH3SSCH3, CH3CH2SCH2CH3, HSCH2CH2SH and C4H4S (thiophene) and sulfur-containing radicals, such as HS, CS, CH3S, CH3CH2S and CH3SS], have been the major subjects in the group because sulfur is an important species contributing to air pollution in the atmosphere. The modeling of the combustion and oxidation of sulfur compounds represents important steps for the control of both the production and the elimination of sulfur-containing pollutants. Chapter 1 is a general introduction of the thesis. Chapters 2 and 6 contain five papers published in, or accepted for publication in, academic periodicals. In Chapter 7, the progress of the construction in the laboratory of a new vacuum ultraviolet laser system equipped with a reflectron mass

  10. Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions. Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies

    SciTech Connect

    Ghosh, Arun K.; Martyr, Cuthbert D.; Osswald, Heather L.; Sheri, Venkat Reddy; Kassekert, Luke A.; Chen, Shujing; Agniswamy, Johnson; Wang, Yuan-Fang; Hayashi, Hironori; Aoki, Manabu; Weber, Irene T.; Mitsuya, Hiroaki

    2015-10-30

    Structure-based design, synthesis, and biological evaluation of a series of very potent HIV-1 protease inhibitors are described. In an effort to improve backbone ligand–binding site interactions, we have incorporated basic-amines at the C4 position of the bis-tetrahydrofuran (bis-THF) ring. We speculated that these substituents would make hydrogen bonding interactions in the flap region of HIV-1 protease. Synthesis of these inhibitors was performed diastereoselectively. A number of inhibitors displayed very potent enzyme inhibitory and antiviral activity. Inhibitors 25f, 25i, and 25j were evaluated against a number of highly-PI-resistant HIV-1 strains, and they exhibited improved antiviral activity over darunavir. Two high resolution X-ray structures of 25f- and 25g-bound HIV-1 protease revealed unique hydrogen bonding interactions with the backbone carbonyl group of Gly48 as well as with the backbone NH of Gly48 in the flap region of the enzyme active site. These ligand–binding site interactions are possibly responsible for their potent activity.

  11. Studying Simple Molecular Ionization using Radiation Emission Spectroscopy

    NASA Astrophysics Data System (ADS)

    Proctor, Christopher; Lemmer, Kristina; Western Michigan University Aerospace LaboratoryPlasma Experiments Team

    2015-11-01

    This study focuses on radiation emission from the formation of simple molecular plasma using a DC glow discharge. The purpose is to measure the emission from argon and molecular nitrogen gas as a function of time with an optical emission spectroscopy system operating in kinetic mode as the gases go from their neutral state to ionized state. The end goal of the research is to develop a diagnostic tool that will be used to study the formation of plasma discharges from complex molecules. The kinetic mode of the CCD camera allows for fast data acquisition so that the species present and their relative concentrations as a function of time can be measured as the plasma is forming. The primary difficulty in the development of this diagnostic tool is designing a device and data analysis technique to allow for kinetic mode operation of the CCD camera. Experimental devices have been designed and built to enable the CCD to operate in kinetic mode, including a fiber optic adapter, camera mount, and twin razor blade system. The twin blades allow for the reduction of exposed pixels on the CCD camera and thereby allow the camera to store data on rows of pixels, rather than imaging the entire camera, allowing for faster data transfer. PhD in Aerospace Engineering.

  12. Theoretical study on interfacial impact ionization in AlN/GaN periodically stacked structure

    NASA Astrophysics Data System (ADS)

    Zheng, Jiyuan; Wang, Lai; Wu, Xingzhao; Hao, Zhibiao; Sun, Changzheng; Xiong, Bing; Luo, Yi; Han, Yanjun; Wang, Jian; Li, Hongtao; Li, Mo; Kang, Jianbin; Li, Qian

    2017-07-01

    A theoretical study on interfacial ionization in the AlN/GaN periodically stacked structure (PSS) avalanche photodiode (APD) has been carried out to explain why the experimental electron ionization coefficient is higher than that in the simulation result. Full band structures for GaN and AlN are combined at the heterojunction interface of the PSS APD for the calculation of the suitable initial ionization state in AlN. Many suitable initial states exist in the Γ valley of AlN, where scattering rates are restricted and ultimately result in a higher ionization coefficient.

  13. New adjacent Bis-tetrahydrofuran Annonaceous acetogenins from Annona muricata.

    PubMed

    Chang, Fang-Rong; Liaw, Chih-Chuang; Lin, Chih-Yuan; Chou, Chi-Jung; Chiu, Hui-Fen; Wu, Yang-Chang

    2003-03-01

    Bioactivity-guided fractionation led to the isolation of two new Annonaceous acetogenins, annocatacin A ( 1). and annocatacin B ( 2). from the seeds and the leaves, respectively, of Annona muricata. Compounds 1 and 2 are the first examples where the adjacent bis-tetrahydrofuran ring system is located at C-15. The new structures were elucidated and characterized by spectral and chemical methods. Both Annonaceous acetogenins 1 and 2 showed significant in vitro cytotoxicity toward the human hepatoma cell lines, Hep G2 and 2,2,15, and were compared with the known adjacent bis-tetrahydrofuran acetogenins, neoannonin ( 3). desacetyluvaricin ( 4). bullatacin ( 5). asimicin ( 6). annoglaucin ( 7). squamocin ( 8). and rollimusin ( 9).

  14. Molecular Driving Forces behind the Tetrahydrofuran-Water Miscibility Gap.

    PubMed

    Smith, Micholas Dean; Mostofian, Barmak; Petridis, Loukas; Cheng, Xiaolin; Smith, Jeremy C

    2016-02-04

    The tetrahydrofuran-water binary system exhibits an unusual closed-loop miscibility gap (transitions from a miscible regime to an immiscible regime back to another miscible regime as the temperature increases). Here, using all-atom molecular dynamics simulations, we probe the structural and dynamical behavior of the binary system in the temperature regime of this gap at four different mass ratios, and we compare the behavior of bulk water and tetrahydrofuran. The changes in structure and dynamics observed in the simulations indicate that the temperature region associated with the miscibility gap is distinctive. Within the miscibility-gap temperature region, the self-diffusion of water is significantly altered and the second virial coefficients (pair-interaction strengths) show parabolic-like behavior. Overall, the results suggest that the gap is the result of differing trends with temperature of minor structural changes, which produces interaction virials with parabolic temperature dependence near the miscibility gap.

  15. Preliminary studies of a new monitor ionization chamber.

    PubMed

    Yoshizumi, Maíra T; Vivolo, Vitor; Caldas, Linda V E

    2010-01-01

    A new monitor ionization chamber was developed at Instituto de Pesquisas Energéticas e Nucleares (IPEN) in order to monitor X-ray beams. The main difference of this monitor ionization chamber in relation to other monitor chambers is its geometry, which consists of a ring-shaped sensitive volume. Because of this geometry, the monitor chamber has a central hole through which the direct radiation beam passes. The operational characteristics of the monitor chamber were evaluated: saturation, ion collection efficiency and polarity effect. Besides these tests, the short- and medium-term stabilities of its response were also evaluated. During the tests the leakage current was always negligible. All results showed values within those recommended internationally (IEC, 1997. Medical electrical equipment-dosimeters with ionization chambers and/or semi-conductor detectors as used in X-ray diagnostic imaging. IEC 61674. International Electrotechnical Commission, Genève). Copyright 2009 Elsevier Ltd. All rights reserved.

  16. Practical implications of some recent studies in electrospray ionization fundamentals.

    PubMed

    Cech, N B; Enke, C G

    2001-01-01

    In accomplishing successful electrospray ionization analyses, it is imperative to have an understanding of the effects of variables such as analyte structure, instrumental parameters, and solution composition. Here, we review some fundamental studies of the ESI process that are relevant to these issues. We discuss how analyte chargeability and surface activity are related to ESI response, and how accessible parameters such as nonpolar surface area and reversed phase HPLC retention time can be used to predict relative ESI response. Also presented is a description of how derivitizing agents can be used to maximize or enable ESI response by improving the chargeability or hydrophobicity of ESI analytes. Limiting factors in the ESI calibration curve are discussed. At high concentrations, these factors include droplet surface area and excess charge concentration, whereas at low concentrations ion transmission becomes an issue, and chemical interference can also be limiting. Stable and reproducible non-pneumatic ESI operation depends on the ability to balance a number of parameters, including applied voltage and solution surface tension, flow rate, and conductivity. We discuss how changing these parameters can shift the mode of ESI operation from stable to unstable, and how current-voltage curves can be used to characterize the mode of ESI operation. Finally, the characteristics of the ideal ESI solvent, including surface tension and conductivity requirements, are discussed. Analysis in the positive ion mode can be accomplished with acidified methanol/water solutions, but negative ion mode analysis necessitates special constituents that suppress corona discharge and facilitate the production of stable negative ions.

  17. Dielectric relaxation of amides and tetrahydrofuran polar mixture in C6H6 from conductivity measurement under 9.90 GHz electric field

    NASA Astrophysics Data System (ADS)

    Sahoo, S.; Sit, S. K.

    2017-01-01

    Dielectric relaxation studies of binary ( jk) polar mixtures of tetrahydrofuran with N-methyl acetamide, N, N-dimethyl acetamide, N-methyl formamide and N, N-dimethyl formamide dissolved in benzene(i) for different weight fractions ( w j k 's) of the polar solutes and mole fractions ( x j 's) of tetrahydrofuran at 25 ∘C are attempted by measuring the conductivity of the solution under 9.90 GHz electric field using Debye theory. The estimated relaxation time ( τ j k 's) and dipole moment ( μ j k 's) agree well with the reported values signifying the validity of the proposed methods. Structural and associational aspects are predicted from the plot of τ j k and μ j k against x j of tetrahydrofuran to arrive at solute-solute (dimer) molecular association upto x j =0.3 of tetrahydrofuran and thereafter solute-solvent (monomer) molecular association upto x j =1.0 for all systems except tetrahydrofuran + N, N-dimethyl acetamide.

  18. INSTRUMENTS AND METHODS OF INVESTIGATION: Surface-ionization field mass-spectrometry studies of nonequilibrium surface ionization

    NASA Astrophysics Data System (ADS)

    Blashenkov, Nikolai M.; Lavrent'ev, Gennadii Ya

    2007-01-01

    The ionization of polyatomic molecules on tungsten and tungsten oxide surfaces is considered for quasiequilibrium or essentially nonequilibrium conditions (in the latter case, the term nonequilibrium surface ionization is used for adsorbate ionization). Heterogeneous reactions are supposed to proceed through monomolecular decay of polyatomic molecules or fragments of multimolecular complexes. The nonequilibrium nature of these reactions is established. The dependences of the current density of disordered ions on the surface temperature, electric field strength, and ionized particle energy distribution are obtained in analytical form. Heterogeneous dissociation energies, the ionization potentials of radicals, and the magnitude of reaction departure from equilibrium are determined from experimental data, as are energy exchange times between reaction products and surfaces, the number of molecules in molecular complexes, and the number of effective degrees of freedom in molecules and complexes. In collecting the data a new technique relying on surface-ionization field mass-spectrometry was applied.

  19. Numerical and experimental study on atmospheric pressure ionization waves propagating through a U-shape channel

    NASA Astrophysics Data System (ADS)

    Yan, Wen; Xia, Yang; Bi, Zhenhua; Song, Ying; Wang, Dezhen; Sosnin, Eduard A.; Skakun, Victor S.; Liu, Dongping

    2017-08-01

    A 2D computational study of ionization waves propagating in U-shape channels at atmospheric pressure was performed, with emphasis on the effect of voltage polarity and the curvature of the bend. The discharge was ignited by a HV needle electrode inside the channel, and power was applied in the form of a trapezoidal pulse lasting 2 µs. We have shown that behavior of ionization waves propagating in U-shape channels was quite different with that in straight tubes. For positive polarity of applied voltage, the ionization waves tended to propagate along one side of walls rather than filling the channel. The propagation velocity of ionization waves predicted by the simulation was in good agreement with the experiment results; the velocity was first increasing rapidly in the vicinity of the needle tip and then decreasing with the increment of propagation distance. Then we have studied the influence of voltage polarity on discharge characteristics. For negative polarity, the ionization waves tended to propagate along the opposite side of the wall, while the discharge was more diffusive and volume-filling compared with the positive case. It was found that the propagation velocity for the negative ionization wave was higher than that for the positive one. Meanwhile, the propagation of the negative ionization wave depended less on the pre-ionization level than the positive ionization wave. Finally, the effect of the radius of curvature was studied. Simulations have shown that the propagation speeds were sensitive to the radii of the curvature of the channels for both polarities. Higher radii of curvature tended to have higher speed and longer length of plasma. The simulation results were supported by experimental observations under similar discharge conditions.

  20. Long Cycle Life Secondary Lithium Cells Utilizing Tetrahydrofuran.

    DTIC Science & Technology

    1984-04-01

    11D-Ri49 762 LONG CYCLE LIFE SECONDARY LITHIUM CELLS UTILIZING 1/1 TETRRHYDROFURAN(U) EIC LABS INC NORWOOD MR K M ABRAHAM ET AL. APR 84 TR-12 N80914...Contract No. N00014-77-C-0155 TECHNICAL REPORT NO. 12 I LONG CYCLE LIFE SECONDARY LITHIUM CELLS UTILIZING TETRAHYDROFURAN By K. M. Abraham J. S. Foos...CONTRACT OF GRANT NUMBER(s) K. 14. Abraham , j. S. Foos and J. L. Goldman N00014-77-C-0155 9. PERFORMING ORGANIZATION NAME AND ADDRESS 10PRAM ELEORMNT

  1. Elastic Scattering of Low-Energy Electrons byTetrahydrofuran

    SciTech Connect

    Trevisan, Cynthia S.; Orel, Ann E.; Rescigno, Thomas N.

    2006-05-09

    We present the results of ab initio calculations for elasticelectron scattering by tetrahydrofuran (THF) using the complex Kohnvariational method. We carried out fixed-nuclei calculations at theequilibrium geometry of the target molecule for incident electronenergies up to 20 eV. The calculated momentum transfer cross sectionsclearly reveal the presence of broad shape resonance behavior in the 8-10eV energy range, in agreement with recent experiments. The calculateddifferential cross sections at 20 eV, which include the effects of thelong-range electron-dipole interaction, are alsofound to be in agreementwith the most recent experimental findings.

  2. Numerical studies of ablation and ionization of railgun materials

    SciTech Connect

    Schnurr, N.M.; Kerrisk, J.F.

    1985-01-01

    The intense radiation from the arc in a railgun may cause vaporization and partial ionization of rail and insulator material. The mass of material added to the arc can have a significant adverse effect on projectile velocity. A numerical model has been developed to predict the change in mass of the arc as a function of several parameters. That model has been incorporated in the Los Alamos Railgun Estimator (LARGE) code and simulations have been run to assess the accuracy of the model. Analytical predictions were found to be in good agreement with experimental data for railgun tests run at Los Alamos. Ablation appears to have a significant effect on railgun performance.

  3. Tetrahydrofuran: two-generation reproduction toxicity in Wistar rats by continuous administration in the drinking water.

    PubMed

    Hellwig, J; Gembardt, C; Jasti, S

    2002-10-01

    In a two-generation reproduction toxicity study, 25 male and 25 female Wistar rats per dose group and generation were exposed continuously to tetrahydrofuran in the drinking water for at least 70 days prior to and during mating, gestation, parturition and lactation to weaning, at concentrations of 0, 1000, 3000 or 9000 ppm (approximately 100, 300 and 700 mg/kg/day in males and females premating, 100, 300 and 800 mg/kg/day in females during gestation, and 200, 500 and 1300 mg/kg/day in females during lactation) through two successive generations. In both generations and sexes, water consumption was dose-relatedly reduced at all doses; food consumption and body weight were reduced at 9000 ppm. Necropsy kidney weights were increased in 9000 ppm F0 males. Pup body weight gain during lactation was reduced in both generations (F1 and F2 pups) and eye opening delayed in the first generation (F1 pups) at 9000 ppm; there were no treatment-related malformations. The NOAEL of tetrahydrofuran in drinking water is 9000 ppm for parental fertility and reproductive performance, and 3000 ppm for systemic parental and developmental toxicity.

  4. Theoretical study of electron impact-ionization of molecules

    NASA Astrophysics Data System (ADS)

    Al-Hagan, Ola

    There has been impressive progress in the area of theoretical treatments of electron impact ionization (e,2e) of atoms and molecules in the last decade. Most recently, low to intermediate incident electron energies have been reported for molecular systems. In this dissertation, different theoretical models will be used to calculate the fully differential cross section (FDCS) for (e,2e) processes for low to intermediate incident electron energies for a variety of final state electron angles and energies for the diatomic molecules H2 and N2, the triatomic molecule H2O, and the boimolecule HCOOH. In addition, there has been a large amount of interest in diatomic molecules inspired by the possibility of observing an interference effect due to the two molecular centers playing the role of a double slit. In this dissertation, the interference effect for the diatomic molecules H2 and N2 will be examined. Finally, there is presently considerable experimental effort directed towards measuring the FDCS for a specific molecular orientation. Most recently, the FDCS for single ionization of aligned hydrogen molecules was measured by Alexander Dorn's experimental group in Heidelberg, Germany. These measurements were successful for the first time to observe features of the FDCS for different alignment of H2. Theoretical calculations for aligned H2 will be presented. These calculations were able to obtain good agreement with the experimental data especially in the binary peak region.

  5. Ionization Study of Isomeric Molecules in Strong-field Laser Pulses

    PubMed Central

    Zigo, Stefan; Le, Anh-Thu; Timilsina, Pratap; Trallero-Herrero, Carlos A.

    2017-01-01

    Through the use of the technique of time-of-flight mass spectroscopy, we obtain strong-field ionization yields for randomly oriented 1,2-dichloroethylene (1,2-DCE) (C2H2Cl2) and 2-butene (C4H8). We are interested in studying the effect of conformal structure in strong-field ionization and, in particular, the role of molecular polarity. That is, we can perform strong-field ionization studies in polar vs non-polar molecules that have the same chemical composition. We report our findings through the ionization yields and the ratio (trans/cis) of each stereoisomer pair as a function of intensity. PMID:28186110

  6. Ionization Study of Isomeric Molecules in Strong-field Laser Pulses

    DOE PAGES

    Zigo, Stefan; Le, Anh-Thu; Timilsina, Pratap; ...

    2017-02-10

    Through the use of the technique of time-of-flight mass spectroscopy, we obtain strong-field ionization yields for randomly oriented 1,2-dichloroethylene (1,2-DCE) (C2H2Cl2) and 2-butene (C4H8). Here, we are interested in studying the effect of conformal structure in strong-field ionization and, in particular, the role of molecular polarity. That is, we can perform strong-field ionization studies in polar vs non-polar molecules that have the same chemical composition. Here, we report our findings through the ionization yields and the ratio (trans/cis) of each stereoisomer pair as a function of intensity.

  7. Vacuum ultraviolet pulsed field ionization-photoelectron and infrared-photoinduced Rydberg ionization study of trans-1,3-butadiene.

    PubMed

    Hou, Y; Woo, H-K; Wang, P; Xing, X; Ng, C Y; Lau, K-C

    2008-09-21

    The vacuum ultraviolet (VUV) laser pulsed field ionization-photoelectron (PFI-PE) spectrum of trans-1,3-butadiene (trans-CH(2)[Double Bond]CHCH[Double Bond]CH(2)) has been measured in the region of 0-1700 cm(-1) above its ionization energy (IE) to probe the vibrational modes nu(i) (+) (i=1-18) of trans-CH(2)[Double Bond]CHCH[Double Bond]CH(2) (+). The high-frequency vibrational modes nu(i) (+) (i=19, 22, and 23) of trans-CH(2)[Double Bond]CHCH[Double Bond]CH(2) (+) have also been probed by the VUV-infrared-photoinduced Rydberg ionization (VUV-IR-PIRI) measurement. On the basis of the semiempirical simulation of the origin VUV-PFI-PE band, the IE(trans-CH(2)[Double Bond]CHCH[Double Bond]CH(2)) is determined to be 73 150.1+/-1.5 cm(-1) (9.06946+/-0.00019 eV). This value has been used to benchmark the state-of-the-art theoretical IE prediction based on the CCSD(T,Full)/CBS procedures, the calculation of which is reported in the present study. The vibrational bands observed in the VUV-PFI-PE and VUV-IR-PIRI spectra were assigned based on ab initio anharmonic vibrational frequencies and Franck-Condon factor calculations for the photoionization transitions. Combining the VUV-PFI-PE and VUV-IR-PIRI measurements, 17 fundamental vibrational frequencies of trans-CH(2)[Double Bond]CHCH[Double Bond]CH(2) (+) have been determined, including nu(1) (+)=182+/-3, nu(2) (+)=300+/-3, nu(3) (+)=428+/-3, nu(4) (+)=514+/-3, nu(5) (+)=554+/-5, nu(6) (+)=901+/-3, nu(7) (+)=928+/-5, nu(8) (+)=994+/-3, nu(9) (+)=1008+/-5, nu(10) (+)=1094+/-5, nu(13) (+)=1258+/-3, nu(14) (+)=1293+/-3, nu(16) (+)=1479+/-3, nu(18) (+)=1620+/-3, nu(19) (+)=2985+/-10, nu(22) (+)=3030+/-10, and nu(23) (+)=3105+/-10 cm(-1).

  8. STUDIES ON THE MECHANISM OF ACTION OF IONIZING RADIATIONS

    PubMed Central

    Barron, E. S. Guzman; Flood, Veronica

    1950-01-01

    Thiol compounds, such as glutathione, 2,3-dimercaptopropanol (BAL), propane-1,3-dithiol, and N-phenylaminopropanedithiol, were readily oxidized by x-rays, beta rays, and gamma rays. The ionic yield for this oxidation was about the same, 3 at pH 7, on irradiation with x-rays and with beta rays; it was 23 per cent less on irradiation with gamma rays. The ionic yield varied with the hydrogen ion concentration, increasing as the pH value increased. There was no reduction of oxidized glutathione on irradiation with dosages of x-rays and gamma rays which produced oxidation of the reduced compound. In the absence of oxygen, the oxidation of thiols by ionizing radiations was only 33 per cent of that obtained in the presence of dissolved oxygen. When the thiol solutions were irradiated in the presence of dissolved oxygen, catalase protected them from oxidation by 17 to 27 per cent. PMID:15402707

  9. Studies of sidescatter and backscatter from pre-ionized plasmas

    NASA Astrophysics Data System (ADS)

    Herbst, M. J.; Clayton, C. E.; Peebles, W. A.; Chen, F. F.

    1980-07-01

    Stimulated Brillouin scattering at 180 deg and sidescatter at 90 deg are observed when CO2 laser light is incident on an arc-preionized, underdense plasma target. Scattering occurs in short spikes, sometimes early in the pulse, sometimes delayed by as much as 700 nsec. This time behavior depends critically on the state of preionization and is explained by the evolution of a laser-driven ionization wave. Using ruby laser interferometry, it is possible to infer the sources of backscatter and sidescatter within this disturbance. In addition, by using a smooth input pulse, it is found that the spikiness of Brillouin scatter is not due solely to mode beating in the input beam.

  10. VUV Photo-processing of PAH Cations: Quantitative Study on the Ionization versus Fragmentation Processes

    NASA Astrophysics Data System (ADS)

    Zhen, Junfeng; Rodriguez Castillo, Sarah; Joblin, Christine; Mulas, Giacomo; Sabbah, Hassan; Giuliani, Alexandre; Nahon, Laurent; Martin, Serge; Champeaux, Jean-Philippe; Mayer, Paul M.

    2016-05-01

    Interstellar polycyclic aromatic hydrocarbons (PAHs) are strongly affected by the absorption of vacuum ultraviolet (VUV) photons in the interstellar medium (ISM), yet the branching ratio between ionization and fragmentation is poorly studied. This is crucial for the stability and charge state of PAHs in the ISM in different environments, affecting in turn the chemistry, the energy balance, and the contribution of PAHs to the extinction and emission curves. We studied the interaction of PAH cations with VUV photons in the 7-20 eV range from the synchrotron SOLEIL beamline, DESIRS. We recorded by action spectroscopy the relative intensities of photo-fragmentation and photo-ionization for a set of eight PAH cations ranging in size from 14 to 24 carbon atoms, with different structures. At photon energies below ˜13.6 eV fragmentation dominates for the smaller species, while for larger species ionization is immediately competitive after the second ionization potential (IP). At higher photon energies all species behave similarly; the ionization yield gradually increases, leveling off between 0.8 and 0.9 at ˜18 eV. Among isomers, PAH structure appears to mainly affect the fragmentation cross section but not the ionization cross section. We also measured the second IP for all species and the third IP for two of them; all are in good agreement with theoretical ones, confirming that PAH cations can be further ionized in the diffuse ISM. Determining actual PAH dication abundances in the ISM will require detailed modeling. Our measured photo-ionization yields for several PAH cations provide a necessary ingredient for such models.

  11. VUV photo-processing of PAH cations: quantitative study on the ionization versus fragmentation processes

    PubMed Central

    Zhen, Junfeng; Castillo, Sarah Rodriguez; Joblin, Christine; Mulas, Giacomo; Sabbah, Hassan; Giuliani, Alexandre; Nahon, Laurent; Martin, Serge; Champeaux, Jean-Philippe; Mayer, Paul M.

    2016-01-01

    Interstellar polycyclic aromatic hydrocarbons (PAHs) are strongly affected by the absorption of vacuum ultraviolet (VUV) photons in the interstellar medium (ISM), yet the branching ratio between ionization and fragmentation is poorly studied. This is crucial for the stability and charge state of PAHs in the ISM in different environments, affecting in turn the chemistry, the energy balance, and the contribution of PAHs to the extinction and emission curves. We studied the interaction of PAH cations with VUV photons in the 7 – 20 eV range from the synchrotron SOLEIL beamline, DESIRS. We recorded by action spectroscopy the relative intensities of photo-fragmentation and photo-ionization for a set of eight PAH cations ranging in size from 14 to 24 carbon atoms, with different structures. At photon energies below ~13.6 eV fragmentation dominates for the smaller species, while for larger species ionization is immediately competitive after the second ionization potential (IP). At higher photon energies, all species behave similarly, the ionization yield gradually increases, leveling off between 0.8 and 0.9 at ~18 eV. Among isomers, PAH structure appears to mainly affect the fragmentation cross section, but not the ionization cross section. We also measured the second IP for all species and the third IP for two of them, all are in good agreement with theoretical ones confirming that PAH cations can be further ionized in the diffuse ISM. Determining actual PAH dication abundances in the ISM will require detailed modeling. Our measured photo-ionization yields for several PAH cations provide a necessary ingredient for such models. PMID:27212712

  12. VUV photo-processing of PAH cations: quantitative study on the ionization versus fragmentation processes.

    PubMed

    Zhen, Junfeng; Castillo, Sarah Rodriguez; Joblin, Christine; Mulas, Giacomo; Sabbah, Hassan; Giuliani, Alexandre; Nahon, Laurent; Martin, Serge; Champeaux, Jean-Philippe; Mayer, Paul M

    2016-05-10

    Interstellar polycyclic aromatic hydrocarbons (PAHs) are strongly affected by the absorption of vacuum ultraviolet (VUV) photons in the interstellar medium (ISM), yet the branching ratio between ionization and fragmentation is poorly studied. This is crucial for the stability and charge state of PAHs in the ISM in different environments, affecting in turn the chemistry, the energy balance, and the contribution of PAHs to the extinction and emission curves. We studied the interaction of PAH cations with VUV photons in the 7 - 20 eV range from the synchrotron SOLEIL beamline, DESIRS. We recorded by action spectroscopy the relative intensities of photo-fragmentation and photo-ionization for a set of eight PAH cations ranging in size from 14 to 24 carbon atoms, with different structures. At photon energies below ~13.6 eV fragmentation dominates for the smaller species, while for larger species ionization is immediately competitive after the second ionization potential (IP). At higher photon energies, all species behave similarly, the ionization yield gradually increases, leveling off between 0.8 and 0.9 at ~18 eV. Among isomers, PAH structure appears to mainly affect the fragmentation cross section, but not the ionization cross section. We also measured the second IP for all species and the third IP for two of them, all are in good agreement with theoretical ones confirming that PAH cations can be further ionized in the diffuse ISM. Determining actual PAH dication abundances in the ISM will require detailed modeling. Our measured photo-ionization yields for several PAH cations provide a necessary ingredient for such models.

  13. Fundamental sputtering studies: Nonresonant ionization of sputtered neutrals

    SciTech Connect

    Burnett, J.W.; Pellin, M.J.; Calaway, W.F.; Gruen, D.M. ); Yates, J.T. Jr. . Dept. of Chemistry)

    1989-01-04

    Because of the practical importance of sputtering, numerous theories and computer simulations are used for predicting many aspects of the sputtering process. Unfortunately, many of the calculated sputtering results are untested by experiment. Until recently, most sputtering experiments required either very high ion fluences or the detection of only minor constituents of the sputtered flux, i.e., ions. These techniques may miss the subtleties involved in the sputtering process. High-detection-efficiency mass spectrometry, coupled with the laser ionization of neutral atoms, allows the detection of the major sputtered species with very low incident ion fluences. The depth-of-origin of sputtered atoms is one example of an important but poorly understood aspect of the sputtering process. By following the sputtering yield of a substrate atom with various coverages of an adsorbed overlayer, the depth of origin of sputtered atoms has been determined. Our results indicate that two-thirds of the sputtered flux originates in the topmost atomic layer. The ion-dose dependence of sputtering yields has long been assumed to be quite minor for low- to-moderate primary ion fluences. We have observed a two-fold decrease in the sputtering yield of the Ru(0001) surface for very low primary ion fluences. Data analysis results in a cross section for damage of 2.7 {plus minus} 1.0 {times} 10{sup {minus}15}cm{sup 2}. 40 refs., 3 figs., 2 tabs.

  14. Rotational spectrum and internal dynamics of tetrahydrofuran-krypton.

    PubMed

    Gou, Qian; Feng, Gang; Evangelisti, Luca; Maris, Assimo; Marchini, Marianna; Velino, Biagio; Caminati, Walther

    2012-01-16

    The rotational spectrum of the tetrahydrofuran-krypton van der Waals complex has been investigated by pulsed-jet Fourier transform microwave spectroscopy. The spectra of the (84)Kr and (86)Kr isotopologues have been assigned and the krypton atom is located nearly over the oxygen atom, almost perpendicular to the COC plane. Each rotational transition is split into two component lines due to, according to the observed Coriolis coupling term between the tunneling states, the residual pseudorotational effects of the ring in the complex. The splitting between the two vibrational sublevels is 87.462(2) and 87.062(2) MHz for the (84)Kr and (86)Kr isotopologues, respectively. These splittings have been used to determine the barrier to inversion, B(2) = 67 cm(-1). The dissociation energy has been estimated to be 3.7 kJ  mol(-1) from centrifugal distortion effects.

  15. Electrochemical stability of LiMF6 (M = P, As, Sb) in tetrahydrofuran and sulfolane

    NASA Technical Reports Server (NTRS)

    Nanjundiah, C.; Goldman, J. L.; Dominey, L. A.; Koch, V. R.

    1988-01-01

    The electrochemical stability of LiSbF6 and LiPF6 in aprotic organic solvents has been investigated. Electrochemical studies, conductivity measurements, and open-circuit stability tests were conducted on LiSbF6 in tetrahydrofuran and sulfolane. Cyclic voltammetric studies of SbF6(-) were compared with those of AsF6(-) and PF6(-) anions. Sb(V) was reduced to Sb(III), and then to Sb(0). AsF6(-) was reduced to AsF3, while no reduction of PF6(-) was observed. The reduction products of AsF6(-) and SbF6(-) passivated the glassy carbon electrode, presumably due to LiF precipitation. Peak potentials were observed to shift in the positive direction as a function of concentration. This was accounted for on the basis of a follow-up chemical reaction.

  16. Numerical studies of wall-plasma interactions and ionization phenomena in an ablative pulsed plasma thruster

    NASA Astrophysics Data System (ADS)

    Yang, Lei; Zeng, Guangshang; Tang, Haibin; Huang, Yuping; Liu, Xiangyang

    2016-07-01

    Wall-plasma interactions excited by ablation controlled arcs are very critical physical processes in pulsed plasma thrusters (PPTs). Their effects on the ionization processes of ablated vapor into discharge plasma directly determine PPT performances. To reveal the physics governing the ionization phenomena in PPT discharge, a modified model taking into account the pyrolysis effect of heated polytetrafluoroethylene propellant on the wall-plasma interactions was developed. The feasibility of the modified model was analyzed by creating a one-dimensional simulation of a rectangular ablative PPT. The wall-plasma interaction results based on this modified model were found to be more realistic than for the unmodified model; this reflects the dynamic changes of the inflow parameters during discharge in our model. Furthermore, the temporal and spatial variations of the different plasma species in the discharge chamber were numerically studied. The numerical studies showed that polytetrafluoroethylene plasma was mainly composed of monovalent ions; carbon and fluorine ions were concentrated in the upstream and downstream discharge chamber, respectively. The results based on this modified model were in good agreement with the experimental formation times of the various plasma species. A large number of short-lived and highly ionized carbon and fluorine species (divalent and trivalent ions) were created during initial discharge. These highly ionized species reached their peak density earlier than the singly ionized species.

  17. Spectroscopic Study of ThCl+ by Two-Photon Ionization

    NASA Astrophysics Data System (ADS)

    Bartlett, Joshua; VanGundy, Robert A.; Heaven, Michael; Peterson, Kirk

    2016-06-01

    Despite the irreplaceable role experimental data plays for evaluating the performance of computational predictions, diatomic actinide species have not received much spectroscopic attention. As an early actinide element, thorium-containing species are ideal candidates for these types of studies. The electronic structure is expected to be relatively simple compared to later actinides, and therefore allows straightforward assessment of calculations. Here, we have studied ThCl+ for the first time via resonant two-photon ionization of jet-cooled ThCl produced by laser ablation of the metal reacted with dilute Cl2. Laser-induced Fluorescence (LIF) spectra have been recorded for the neutral molecule from 16000 - 23500 cm-1 in search of a suitable intermediate state for subsequent two-photon ionization experiments. Monochromator dispersion of the fluorescence has recovered the ground state vibration and anharmonic constants of ThCl. Resonant Two-Photon Ionization (R2PI) within a time-of-flight mass spectrometer was used to confirm ThCl production, and Pulsed Field Ionization Zero Kinetic Energy photoelectron spectroscopy (PFI-ZEKE) has been performed to identify the ionization energy as well as several of the low-lying states of the ThCl+ molecule. These constants have been predicted at the CASPT2 and CCSD(T) levels of theory, and a discussion of the calculations' performance will be presented alongside the recorded spectra.

  18. Numerical studies of wall–plasma interactions and ionization phenomena in an ablative pulsed plasma thruster

    SciTech Connect

    Yang, Lei; Zeng, Guangshang; Huang, Yuping; Tang, Haibin; Liu, Xiangyang

    2016-07-15

    Wall–plasma interactions excited by ablation controlled arcs are very critical physical processes in pulsed plasma thrusters (PPTs). Their effects on the ionization processes of ablated vapor into discharge plasma directly determine PPT performances. To reveal the physics governing the ionization phenomena in PPT discharge, a modified model taking into account the pyrolysis effect of heated polytetrafluoroethylene propellant on the wall–plasma interactions was developed. The feasibility of the modified model was analyzed by creating a one-dimensional simulation of a rectangular ablative PPT. The wall–plasma interaction results based on this modified model were found to be more realistic than for the unmodified model; this reflects the dynamic changes of the inflow parameters during discharge in our model. Furthermore, the temporal and spatial variations of the different plasma species in the discharge chamber were numerically studied. The numerical studies showed that polytetrafluoroethylene plasma was mainly composed of monovalent ions; carbon and fluorine ions were concentrated in the upstream and downstream discharge chamber, respectively. The results based on this modified model were in good agreement with the experimental formation times of the various plasma species. A large number of short-lived and highly ionized carbon and fluorine species (divalent and trivalent ions) were created during initial discharge. These highly ionized species reached their peak density earlier than the singly ionized species.

  19. Photoelectron and electron momentum spectroscopy of tetrahydrofuran from a molecular dynamical perspective.

    PubMed

    Shojaei, S H Reza; Morini, Filippo; Deleuze, Michael S

    2013-03-07

    The results of experimental studies of the valence electronic structure of tetrahydrofuran employing He I photoelectron spectroscopy as well as Electron Momentum Spectroscopy (EMS) have been reinterpreted on the basis of Molecular Dynamical simulations employing the classical MM3 force field and large-scale quantum mechanical simulations employing Born-Oppenheimer Molecular Dynamics in conjunction with the dispersion corrected ωB97XD exchange-correlation functional. Analysis of the produced atomic trajectories demonstrates the importance of thermal deviations from the lowest energy path for pseudorotation, in the form of considerable variations of the ring-puckering amplitude. These deviations are found to have a significant influence on several outer-valence electron momentum distributions, as well as on the He I photoelectron spectrum.

  20. Numerical study of the ionization process and radiation transport in the channel of plasma accelerator

    NASA Astrophysics Data System (ADS)

    Kozlov, A. N.; Konovalov, V. S.

    2017-10-01

    The study of the axisymmetric ionizing gas flows in a channel of the quasi-steady plasma accelerator is presented. Model is based on the MHD and radiation transport equations. The MHD model for a three-component medium consisting of atoms, ions and electrons takes into account the basic mechanisms of the electrical conductivity and heat transport. The model of the radiation transport includes the basic mechanisms of emission and absorption for the different parts of the spectrum. Results of the numerical studies of ionization process and radiation transport are obtained in the approximation of the local thermodynamic equilibrium.

  1. Surface ionization mass spectrometry of drugs in the thermal and hyperthermal energy range -- a comparative study

    NASA Astrophysics Data System (ADS)

    Dagan, Shai; Amirav, Aviv; Fujü, Toshihiro

    1995-12-01

    Thermal and hyperthermal surface ionization (SI) mass spectra of nicotine, caffeine and lidocaine were obtained using a rhenium oxide surface. Thermal surface ionization was studied on an oxidized surface positioned inside an electron impact ion source, while hyperthermal surface ionization (HSI) was obtained upon seeding the compounds into a hydrogen or helium supersonic molecular beam that scattered from the rhenium oxide surface. Both HSI and SI provide rich, informative and complementary mass spectral information. The results indicate that SI follows thermal dissociation processes on the surface prior to the desorption of the ion, while in HSI no thermal equilibrium is established and the ionization process is impulsive, followed by mostly unimolecular ion dissociation. HSI mass spectra are similar to electron impact mass spectra in the fragment ion masses, but the observed relative intensities are different. HSI is a softer ionization method compared to SI, and enables the degree of ion fragmentation to be tuned so that it can be minimized to a low level at low molecular kinetic energy. In SI, limited control over the degree of fragmentation is possible through the surface temperature. The analytical mass spectrometric applications of SI and HSI are briefly mentioned.

  2. Hot-cavity studies for the Resonance Ionization Laser Ion Source

    NASA Astrophysics Data System (ADS)

    Henares, J. L.; Lecesne, N.; Hijazi, L.; Bastin, B.; Kron, T.; Lassen, J.; Le Blanc, F.; Leroy, R.; Osmond, B.; Raeder, S.; Schneider, F.; Wendt, K.

    2016-09-01

    The Resonance Ionization Laser Ion Source (RILIS) has emerged as an important technique in many Radioactive Ion Beam (RIB) facilities for its reliability, and ability to ionize target elements efficiently and element selectively. GISELE is an off-line RILIS test bench to study the implementation of an on-line laser ion source at the GANIL separator facility. The aim of this project is to determine the best technical solution which combines high selectivity and ionization efficiency with small ion beam emittance and stable long term operation. The ion source geometry was tested in several configurations in order to find a solution with optimal ionization efficiency and beam emittance. Furthermore, a low work function material was tested to reduce the contaminants and molecular sidebands generated inside the ion source. First results with ZrC ionizer tubes will be presented. Furthermore, a method to measure the energy distribution of the ion beam as a function of the time of flight will be discussed.

  3. Numerical Study on Blast Wave Propagation Driven by Unsteady Ionization Plasma

    SciTech Connect

    Ogino, Yousuke; Sawada, Keisuke; Ohnishi, Naofumi

    2008-04-28

    Understanding the dynamics of laser-produced plasma is essential for increasing the available thrust and energy conversion efficiency from a pulsed laser to a blast wave in a gas-driven laser-propulsion system. The performance of a gas-driven laser-propulsion system depends heavily on the laser-driven blast wave dynamics as well as on the ionizing and/or recombining plasma state that sustains the blast wave. In this study, we therefore develop a numerical simulation code for a laser-driven blast wave coupled with time-dependent rate equations to explore the formation of unsteady ionizing plasma produced by laser irradiation. We will also examine the various properties of blast waves and unsteady ionizing plasma for different laser input energies.

  4. Kinematic Study of Ionized and Molecular Gases in Ultracompact HII Region in Monoceros R2

    NASA Astrophysics Data System (ADS)

    Kim, Hwihyun; Lacy, John H.; Jaffe, Daniel Thomas

    2017-06-01

    Monoceros R2 (Mon R2) is an UltraCompact HII region (UCHII) surrounded by several PhotoDissociation Regions (PDRs). It is an excellent example to investigate the chemistry and physics of early stage of massive star formation due to its proximity (830pc) and brightness. Previous studies suggest that the wind from the star holds the ionized gas up against the dense molecular core and the higher pressure at the head drives the ionized gas along the shell. In order for the model to work, there should be evidence for dense molecular gas along the shell walls, irradiated by the UCHII region and perhaps entrained into the flow along the walls.We obtained the Immersion Grating INfrared Spectrograph (IGRINS) spectra of Mon R2 to study the kinematic patterns in the areas where ionized and molecular gases interact. The position-velocity maps from the high resolution (R~45,000) H- and K-band (1.4-2.5μm) IGRINS spectra demonstrate that the ionized gases (Brackett and Pfund series, He and Fe emission lines; Δv ≈ 40km/s) flow along the walls of the surrounding clouds. This is consistent with the model by Zhu et al. (2008). In the PV maps of the H2 emission lines there is no obvious motion (Δv ≈ 10km/s) of the molecular hydrogen right at the ionization boundary. This implies that the molecular gas is not taking part in the flow as the ionized gas is moving along the cavity walls.This work used the Immersion Grating Infrared Spectrograph (IGRINS) that was developed under a collaboration between the University of Texas at Austin and the Korea Astronomy and Space Science Institute (KASI) with the financial support of the US National Science Foundation (NSF; grant AST-1229522), of the University of Texas at Austin, and of the Korean GMTProject of KASI.

  5. Ionization of cytosine monomer and dimer studied by VUV photoionization and electronic structure calculations

    SciTech Connect

    Kostko, Oleg; Bravaya, Ksenia; Krylov, Anna; Ahmed, Musahid

    2009-12-14

    We report a combined theoretical and experimental study of ionization of cytosine monomers and dimers. Gas-phase molecules are generated by thermal vaporization of cytosine followed by expansion of the vapor in a continuous supersonic jet seeded in Ar. The resulting species are investigated by single photon ionization with tunable vacuum-ultraviolet (VUV) synchrotron radiation and mass analyzed using reflectron mass spectrometry. Energy onsets for the measured photoionization efficiency (PIE) spectra are 8.60+-0.05 eV and 7.6+-0.1 eV for the monomer and the dimer, respectively, and provide an estimate for the adiabatic ionization energies (AIE). The first AIE and the ten lowest vertical ionization energies (VIEs) for selected isomers of cytosine dimer computed using equation-of-motion coupled-cluster (EOM-IP-CCSD) method are reported. The comparison of the computed VIEs with the derivative of the PIE spectra, suggests that multiple isomers of the cytosine dimer are present in the molecular beam. The calculations reveal that the large red shift (0.7 eV) of the first IE of the lowest-energy cytosine dimer is due to strong inter-fragment electrostatic interactions, i.e., the hole localized on one of the fragments is stabilized by the dipole moment of the other. A sharp rise in the CH+ signal at 9.20+-0.05 eV is ascribed to the formation of protonated cytosine by dissociation of the ionized dimers. The dominant role of this channel is supported by the computed energy thresholds for the CH+ appearance and the barrierless or nearly barrierless ionization-induced proton transfer observed for five isomers of the dimer.

  6. Reactions associated with ionization in water: a direct ab initio dynamics study of ionization in (H2O)17

    SciTech Connect

    Furuhama, Ayako; Dupuis, Michel; Hirao, Kimihiko

    2006-05-07

    A quasi-classical ab initio dynamics calculation of the (H2O)17 cluster, which is the first water cluster that includes a four-fold coordinated water molecule, has been carried out to obtain a detailed picture of the elementary processes and energy redistribution induced by ionization in a model of aqueous water. Well within 100 fs after ionization, a proton is seen to have transferred from the “ionized molecule” to a neighboring molecule, forming a hydronium ion and a hydroxyl radical. Two neighboring water molecules to the ionized water molecule play an important role in the reaction, in what we term a “reactive trimer”. The reaction time is gated by the encounter of the “ionized” water molecule with these two neighboring molecules and this occurs at ~ 35 fs after ionization. We find that the distance of approach between the “ionized” molecule and the neighboring molecule reflects best the time characteristics of the transfer of a proton, and thus of the formation of a hydronium ion and an OH radical. These findings are consistent with those for smaller cyclic clusters, albeit the dynamics of the transferring proton is much damped in our simulation compared to the small cyclic cluster cases. We use a partitioning scheme for the kinetic energy of the << OLE Object: Microsoft Equation 3.0 >> system that distinguishes the “reactive trimer” and the surrounding medium. The analysis of the simulation indicates that the kinetic energy of the surrounding medium increases markedly right after the event of ionization. The increase in kinetic energy is consistent with a reorganization of the surrounding medium, in this case an orientation relaxation, from a configuration as a hydrogen bond donor to the “ionized” tetra-coordinated water molecule, into a configuration where the surrounding water molecule have turned their dipoles for a more favorable interaction with the “ionized” water cation. Battelle operates the Pacific Northwest National

  7. Epoxygenase Eicosanoids: Synthesis of Tetrahydrofuran-Diol Metabolites and Their Vasoactivity

    PubMed Central

    Falck, J. R.; Reddy, L. Manmohan; Byun, Kihwan; Campbell, William B.; Yi, Xiu-Yu

    2007-01-01

    Eight members of a recently identified family of tetrahydrofuran-diols (THFDs), originating from epoxyeicosatrienoic acids (EETs), were prepared stereospecifically from D-(+)-glucose. The THFDs potently induced relaxation of pre-contracted bovine arteries. PMID:17293113

  8. Studies of nanosecond pulse surface ionization wave discharges over solid and liquid dielectric surfaces

    NASA Astrophysics Data System (ADS)

    Petrishchev, Vitaly; Leonov, Sergey; Adamovich, Igor V.

    2014-12-01

    Surface ionization wave discharges generated by high-voltage nanosecond pulses, propagating over a planar quartz surface and over liquid surfaces (distilled water and 1-butanol) have been studied in a rectangular cross section test cell. The discharge was initiated using a custom-made, alternating polarity, high-voltage nanosecond pulse plasma generator, operated at a pulse repetition rate of 100-500 Hz, with a pulse peak voltage and current of 10-15 kV and 7-20 A, respectively, a pulse FWHM of ˜100 ns, and a coupled pulse energy of 2-9 mJ/pulse. Wave speed was measured using a capacitive probe. ICCD camera images demonstrated that the ionization wave propagated predominantly over the quartz wall or over the liquid surface adjacent to the grounded waveguide placed along the bottom wall of the test cell. Under all experimental conditions tested, the surface plasma ‘sheet’ was diffuse and fairly uniform, both for positive and negative polarities. The parameters of ionization wave discharge propagating over distilled water and 1-butanol surfaces were close to those of the discharge over a quartz wall. No perturbation of the liquid surface by the discharge was detected. In most cases, the positive polarity surface ionization wave propagated at a higher speed and over a longer distance compared to the negative polarity wave. For all three sets of experiments (surface ionization wave discharge over quartz, water and 1-butanol), wave speed and travel distance decreased with pressure. Diffuse, highly reproducible surface ionization wave discharge was also observed over the liquid butanol-saturated butanol vapor interface, as well as over the distilled water-saturated water vapor interface, without buffer gas flow. No significant difference was detected between surface ionization discharges sustained using single-polarity (positive or negative), or alternating polarity high-voltage pulses. Plasma emission images yielded preliminary evidence of charge removal from the

  9. Syntheses of 2, 5-dialkylfuran and tetrahydrofuran carbinols and their cytotoxic activity.

    PubMed

    Krauss, Jürgen; Unterreitmeier, Doris; Antlsperger, Dorothee

    2003-08-01

    2, 5-Dialkylfuran and tetrahydrofuran compounds as structural elements of Annonaceae acetogenins like Asitrocinwere synthesized starting from furfural by Grignard reactions, lithiation of the furan ring and addition of aliphatic aldehydes. Hydrogenation of the furan rings over Pd-catalyst gave the corresponding tetrahydrofurans. All resulting compounds showed no or rather less antimicrobial activity against grampositive, gram-negative bacteria and fungi compared to tetracycline or clotrimazol but high cytotoxic activity against HL 60 cell line determined in the MTT assay.

  10. Visible-Light-Promoted Vinylation of Tetrahydrofuran with Alkynes through Direct C-H Bond Functionalization.

    PubMed

    Li, Jing; Zhang, Jing; Tan, Haibo; Wang, David Zhigang

    2015-05-15

    Mild and direct C-H bond functionalizations and vinylations of tetrahydrofuran with alkynes have been accomplished through visible light photocatalysis, yielding a range of vinyl tetrahydrofurans under the synergistic actions of organic dye-type photocatalyst eosin Y, tert-butyl hydroperoxide (t-BuOOH), and a 45 W household lightbulb. A significant kinetic isotope effect (KIE) was recorded, which helps shed light on the mechanistic course.

  11. Electron Impact Ionization and Fragmentation Dynamics of Small Atomic and Molecular Clusters

    NASA Astrophysics Data System (ADS)

    Dorn, Alexander

    2016-09-01

    New ionization and fragmentation reactions emerge if target atoms or molecules are embedded in an environment as it is the case in small clusters or in the condensed phase. These can be intermolecular energy and charge transfer processes or a completely modified fragmentation behavior of the molecular ions. Here we study low energy electron impact induced ionization with a multi-electron and ion imaging spectrometer (reaction microscope) and a supersonic gas jet target which can produce small clusters of various target species. Interatomic reactions are studied for the model system of weakly bound Ar2 dimers. Here, the coincident detection of three electrons and two ions gives detailed insight in interatomic Coulombic decay and radiative charge transfer processes. Such processes were also found in bio-relevant systems like water clusters. We studied pure and water-mixed clusters of tetrahydrofuran (C4H8O, THF) which is the simplest analog of deoxyribose in the DNA backbone. One observation is that ionization of the outermost valence orbital for the monomer leads to stable THF ions. In contrast if THF is bound to another THF or a water molecule the molecular ring breaks. In addition we identify intermolecular Coulombic decay induced by energy transfer from a water molecule ionized in the inner valence shell to the neighboring THF molecule.

  12. Choosing populations to study the health effects of low-dose ionizing radiation.

    PubMed Central

    Dreyer, N A; Loughlin, J E; Friedlander, E R; Clapp, R W; Fahey, F H

    1981-01-01

    In January 1978, the United States Congress requested information about the utility of additional epidemiologic studies for quantifying the health effects of low-dose ionizing radiation. In our judgment, no single population can be recommended for study on purely scientific grounds, since the largest group offers only a small chance to obtain a definitive result. On the other hand, if social pressures and regulatory agencies mandate that such studies be attempted, we would recommend prospective cohort studies of occupational populations. We propose that a national worker registry be developed using ionizing radiation as the prototype for studying other occupational exposures. The problems related to studying low-level radiation are not unique, but apply equally to investigations dealing with a great variety of toxic agents. A national plan for collecting information on workers' exposure and health could provide a cost-efficient means to answer public health questions posed by the Congress, scientists and the public. PMID:7294269

  13. Studying the Effect of Ionization Radiation of 60Co on the Spirulina

    NASA Astrophysics Data System (ADS)

    Ai, Weidang; Guo, Shuang-Sheng; Ai, Weidang; Dong, Wen-Ping; Qin, Li-Feng; Tang, Yong-Kang

    It studied the effect of ionization radiation on the Spirulina plastensis(No.6) by using the γ-rays of 60 Co. In the experiment, Spirulina were irradiated, and the dose of the ionization radiation covered 0, 0.5, 1.0, 1.5, 2.0, 2.5, 3.0kGy. After irradiating, these Spirulina were cultured under the same conditions. During the course of the experiment, the growth rate, photosynthetic efficiency and nutrition quality of the Spirulina, were analyzed. From the results, low dose of γ-rays (less than 1.5kGy) could improve the content of phycobilin and protein of Spirulina. Only small changes in the morphology of algae filament were found at dose less than 1.0kGy. But with the increase of the dose of γ-rays (more than 1.5kGy), the filaments would break up or even disintegrate. Spirulina had stronger ionization radiation proof and self-rehabilitation capacity, but the growth of Spirulina was stagnated. The LD50 (i.e. the dose resulted in 50% death of the Spirulina) of the colony was 2.0kGy. Considering the capacity of being resistant to γ-rays irradiation, Spirulina can be considered as one of the key biological components in the Controlled Ecological Life Support System (CELSS) for future long-term space missions. Keywords: Controlled Ecological Life Support System (CELSS); Spirulina; ionization radiation; biological component

  14. Ionization and excitation in collisions between antiprotons and H(1s) atoms studied with Sturmian bases

    SciTech Connect

    Winter, Thomas G.

    2011-02-15

    Coupled two-center as well as one-center Sturmian cross sections have been determined for ionization and excitation in p-bar-H(1s) collisions at p-bar energies from 1 to 16 000 keV, following the author's recent work for p-H(1s) collisions [Phys. Rev. A 80, 032701 (2009)]. Basis convergence is studied in detail. Results for ionization and excitation are compared to other coupled-state results and to numerical results, as well as limited experimental results for ionization only. Except for the large, two-center coupled-Gaussian-pseudostate calculation of Toshima for ionization only [Phys. Rev. A 64, 024701 (2001)], previous calculations employed one-center bases, including a one-center Sturmian calculation by Igarashi et al. [Phys. Rev. A 61, 062712 (2000)]. A strong contrast with p-H collisions is confirmed at intermediate energies, while at high energies the extent of agreement is revealed between coupled-state results for the two collisional systems, as well as with first Born results.

  15. Benchmark theoretical study of the ionization threshold of benzene and oligoacenes

    NASA Astrophysics Data System (ADS)

    Deleuze, M. S.; Claes, L.; Kryachko, E. S.; François, J.-P.

    2003-08-01

    In straightforward continuation of Green's function studies of the ultraviolet photoelectron spectra of polycyclic aromatic compounds [Deleuze et al., J. Chem. Phys. 115, 5859 (2001); M. S. Deleuze, ibid. 116, 7012 (2002)], we present a benchmark theoretical determination of the ionization thresholds of benzene, naphthalene, anthracene, naphthacene (tetracene), pentacene, and hexacene, within chemical accuracy [0.02-0.07 eV]. The vertical ionization potentials of these compounds have been obtained from series of single-point calculations at the Hartree-Fock, second-, third-, and partial fourth-order Møller-Plesset (MP2, MP3, MP4SDQ) levels, and from coupled cluster calculations including single and double excitations (CCSD) as well as a perturbative estimate of connected triple excitations [CCSD(T)], using basis sets of improving quality, introducing up to 510, 790, 1070, 1350, 1630, and 1910 basis functions in the computations, respectively. A focal point analysis of the convergence of the calculated ionization potentials has been performed in order to extrapolate the CCSD(T) results to an asymptotically (cc-pV∞Z) complete basis set. The present results confirm the adequacy of the outer-valence Green's function scheme for strongly correlated systems. Adiabatic ionization energies have been further determined by incorporating Beck-three-parameter Lee-Yang-Parr functional corrections for zero-point vibrational energies and for geometrical relaxations. Extension of the analysis to the CCSD(T)/cc-pV∞Z level shows that the energy minimum form of the benzene radical cation is an obtuse structure related to the 2B2g state. Isotopic shifts of the adiabatic ionization potentials, due to deuterium substitution of hydrogens, have also been discussed.

  16. Computer study of convection of weakly ionized plasma in a nonuniform magnetic field.

    NASA Technical Reports Server (NTRS)

    Shiau, J. N.

    1972-01-01

    A weakly ionized plasma in a strong and nonuniform magnetic field exhibits an instability analogous to the flute instability in a fully ionized plasma. The instability sets in at a critical magnetic field. To study the final state of the plasma after the onset of the instability, the plasma equations are integrated numerically assuming a certain initial spectrum of small disturbances. In the regime studied, numerical results indicate a final steadily oscillating state consisting of a single finite amplitude mode together with a time-independent modification of the original equilibrium. These results agree with the analytic results obtained by Simon in the slightly supercritical regime. As the magnetic field is increased further, the wavelength of the final oscillation becomes nonunique. There exists a subinterval in the unstable wave band. Final stable oscillation with a wavelength in this subinterval can be established if the initial disturbance has a sufficiently strong component at the particular wavelength.

  17. The study of ionizing radiation effects on polypropylene and rice husk ash composite

    NASA Astrophysics Data System (ADS)

    Alfaro, E. F.; Dias, D. B.; Silva, L. G. A.

    2013-03-01

    The aim of this work was to study the ionizing radiation effects on polypropylene/20% of rice husk ash composites. The composites were irradiated by electron beam at different doses and the mechanical and thermal properties were evaluated using tensile strength, Izod impact, hardness, softening temperature, differential scanning calorimetry (DSC) and thermogravimetry (TG). The results showed that the properties decreased by increasing irradiation dose due to chain scission.

  18. Fully differential study on dissociative ionization dynamics of deuteron molecules in strong elliptical laser fields

    NASA Astrophysics Data System (ADS)

    Shao, Yun; He, Peilun; Liu, Ming-Ming; Sun, Xufei; Li, Min; Deng, Yongkai; Wu, Chengyin; He, Feng; Gong, Qihuang; Liu, Yunquan

    2017-03-01

    Deuteron momentum distributions from the dissociative ionization of D2 in intense elliptically polarized laser fields have been explored in a joint experimental and numerical study. The asymmetrical charge localization in the dissociative D2 + offers a large torque, and thus an elliptically polarized laser field efficiently rotates the molecular ion during its dissociation, resulting in the emission of deuterons finally deviating from the bond direction at the instant of tunneling ionization of D2. The rotating torque of the molecular ions increases with the field ellipticity, leading to an ellipticity-dependent tilt angle for the deuteron momentum distribution. Due to the notable rotation of D2 + during its dissociation, the photoelectron angular distributions in the laboratory frame and the molecular frame are distinct, which illustrates that the axial recoil approximation is broken for discussing the photoelectron angular distributions of molecules in elliptically polarized laser fields.

  19. Oxidative Cyclization of 1,5-Dienes with Hydrogen Peroxide Catalyzed by an Osmium(III) Complex: Synthesis of cis-Tetrahydrofurans.

    PubMed

    Sugimoto, Hideki; Kanetake, Takayuki; Maeda, Kazuki; Itoh, Shinobu

    2016-03-18

    Stereoselective oxidative cyclization of 1,5-dienes with hydrogen peroxide catalyzed by [Os(III)(OH)(H2O)(L-N4Me2)](PF6)2 (1: L-N4Me2 = N,N'-dimethyl-2,11-diaza-[3,3](2,6)pyridinophane) is explored. 1,5-Dienes involving geraniol derivatives are converted to the corresponding tetrahydrofurans in modest to high yields. The products exclusively have the cis-conformation with respect to the substituents at the 2- and 5-positions of the tetrahydrofuran ring. The products also have a syn-conformation with respect to the furan oxygen atom and the hydroxyl groups. Mechanistic studies including a direct reaction of the oxo-hydroxo-osmium(V) complex, 2, with a dihydroxylated geraniol derivative are performed.

  20. Impact of APCI ionization source in liquid chromatography tandem mass spectrometry based tissue distribution studies.

    PubMed

    Khatal, Laxman; Gaur, Ashwani; Naphade, Ashish; Kandikere, Vishwottam; Mookhtiar, Kasim

    2016-10-01

    Measurement of test article concentration in tissue samples has been an important part of pharmacokinetic study and has helped to co-relate pharmacokinetic/pharmacodynamic relationships since the 1950s. Bioanalysis of tissue samples using LC-MS/MS comes with unique challenges in terms of sample handling and inconsistent analyte response owing to nonvolatile matrix components. Matrix effect is a phenomenon where the target analyte response is either suppressed or enhanced in the presence of matrix components. Based on previous reports electrospray ionization (ESI) mode of ionization is believed to be more affected by matrix components than atmospheric pressure chemical ionization (APCI) or atmospheric pressure photoionization. To explore the impact of ionization source with respect to bioanalysis of tissue samples, five structurally diverse compounds - atenolol, verapamil, diclofenac, propranolol and flufenamic acid - were selected. Quality control standards were spiked into 10 different biological matrices like whole blood, liver, heart, brain, spleen, kidney, skeletal muscle, eye and skin tissue and were quantified against calibration standards prepared in rat plasma. Quantitative bioanalysis was performed utilizing both APCI and ESI mode and results were compared. Quality control standards when analyzed with APCI mode were found to be more consistent in terms of accuracy and precision as compared with ESI mode. Additionally, for some instances, up to 20-fold broader dynamic linearity range was observed with APCI mode as compared with ESI mode. As phospholid interferences have poor response in APCI mode, protein precipitation extraction technique can be used for multimatrix quantitation, which is more amenable to automation. The approach of multiple biological matrix quantitation against a single calibration curve helps bioanalysts to reduce turnaround time. Copyright © 2016 John Wiley & Sons, Ltd.

  1. Heat capacity of tetrahydrofuran clathrate hydrate and of its components, and the clathrate formation from supercooled melt.

    PubMed

    Tombari, E; Presto, S; Salvetti, G; Johari, G P

    2006-04-21

    We report a thermodynamic study of the formation of tetrahydrofuran clathrate hydrate by explosive crystallization of water-deficient, near stoichiometric, and water-rich solutions, as well as of the heat capacity, C(p), of (i) supercooled tetrahydrofuran-H2O solutions and of the clathrate hydrate, (ii) tetrathydrofuran (THF) liquid, and (iii) supercooled water and the ice formed on its explosive crystallization. In explosive freezing of supercooled solutions at a temperature below 257 K, THF clathrate hydrate formed first. The nucleation temperature depends on the cooling rate, and excess water freezes on further cooling. The clathrate hydrate melts reversibly at 277 K and C(p) increases by 770 J/mol K on melting. The enthalpy of melting is 99.5 kJ/mol and entropy is 358 J/mol K. Molar C(p) of the empty host lattice is less than that of the ice, which is inconsistent with the known lower phonon frequency of H2O in the clathrate lattice. Analysis shows that C(p) of THF and ice are not additive in the clathrate. C(p) of the supercooled THF-H2O solutions is the same as that of water at 247 K, but less at lower temperatures and more at higher temperatures. The difference tends to become constant at 283 K. The results are discussed in terms of the hydrogen-bonding changes between THF and H2O.

  2. Study of Electrochemical Reactions Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Liu, Pengyuan; Lanekoff, Ingela T.; Laskin, Julia; Dewald, Howard D.; Chen, Hao

    2012-07-03

    The combination of electrochemistry (EC) and mass spectrometry (MS) is a powerful analytical tool for studying mechanisms of redox reactions, identification of products and intermediates, and online derivatization/recognition of analytes. This work reports a new coupling interface for EC/MS by employing nanospray desorption electrospray ionization (nano-DESI), a recently developed ambient ionization method. We demonstrate online coupling of nano-DESI-MS with a traditional electrochemical flow cell, in which the electrolyzed solution emanating from the cell is ionized by nano-DESI for MS analysis. Furthermore, we show first coupling of nano-DESI-MS with an interdigitated array (IDA) electrode enabling chemical analysis of electrolyzed samples directly from electrode surfaces. Because of its inherent sensitivity, nano-DESI enables chemical analysis of small volumes and concentrations of sample solution. Specifically, good-quality signal of dopamine and its oxidized form, dopamine ortho-quinone, was obtained using 10 μL of 1 μM solution of dopamine on the IDA. Oxidation of dopamine, reduction of benzodiazepines, and electrochemical derivatization of thiol groups were used to demonstrate the performance of the technique. Our results show the potential of nano-DESI as a novel interface for electrochemical mass spectrometry research.

  3. In-gas-cell laser ionization studies of plutonium isotopes at IGISOL

    NASA Astrophysics Data System (ADS)

    Pohjalainen, I.; Moore, I. D.; Kron, T.; Raeder, S.; Sonnenschein, V.; Tomita, H.; Trautmann, N.; Voss, A.; Wendt, K.

    2016-06-01

    In-gas-cell resonance laser ionization has been performed on long-lived isotopes of Pu at the IGISOL facility, Jyväskylä. This initiates a new programme of research towards high-resolution optical spectroscopy of heavy actinide elements which can be produced in sufficient quantities at research reactors and transported to facilities elsewhere. In this work a new gas cell has been constructed for fast extraction of laser-ionized elements. Samples of 238-240,242Pu and 244Pu have been evaporated from Ta filaments, laser ionized, mass separated and delivered to the collinear laser spectroscopy station. Here we report on the performance of the gas cell through studies of the mass spectra obtained in helium and argon, before and after the radiofrequency quadrupole cooler-buncher. This provides valuable insight into the gas phase chemistry exhibited by Pu, which has been additionally supported by measurements of ion time profiles. The resulting monoatomic yields are sufficient for collinear laser spectroscopy. A gamma-ray spectroscopic analysis of the Pu samples shows a good agreement with the assay provided by the Mainz Nuclear Chemistry department.

  4. Study of fast electron transport and ionization in isochorically heated solid foil

    NASA Astrophysics Data System (ADS)

    Sawada, Hiroshi; Sentoku, Yasuhiko; Pandit, Rishi; Yabuuchi, Toshinori; Zastrau, Ulf; Foerster, Eckhart; Beg, Farhat; McLean, Harry; Chen, Hui; Park, J.-B.; Patel, Prav; Link, Anthony; Ping, Yuan

    2016-10-01

    Interaction of a high-power, short-pulse laser with a solid target generates a significant number of relativistic MeV electrons, subsequently heating the target isochorically in the transport process. Fast electron driven ionization of a solid titanium foil was studied by measuring Ti K-alpha x-rays and performing 2-D particle-in-cell simulations. The experiment was performed using the 50 TW Leopard short-pulse laser at UNR's Nevada Terawatt Facility. The 15 J, 0.35 ps laser was tightly focused on to a various sized, 2- μm thick Ti foil within a 8 μm spot to achieve the peak intensity of 2×1019 W/cm2. The transport of the fast electrons produced 4.51 keV Ti K-alpha x-rays. The yields and 2-D monochromatic images were recorded with a Bragg crystal spectrometer and a spherically bent crystal imager. The ionization degree of the heated foil was determined to be 15 from the ionized K-alpha lines and the missing emission in the images. 2-D PIC simulations using a PICLS code with a radiation transport module were performed to calculate the K-alpha profiles and spectra. Details of the experiment and comparison will be presented.

  5. Generation of naphthoquinone radical anions by electrospray ionization: solution, gas-phase, and computational chemistry studies.

    PubMed

    Vessecchi, Ricardo; Naal, Zeki; Lopes, José N C; Galembeck, Sérgio E; Lopes, Norberto P

    2011-06-02

    Radical anions are present in several chemical processes, and understanding the reactivity of these species may be described by their thermodynamic properties. Over the last years, the formation of radical ions in the gas phase has been an important issue concerning electrospray ionization mass spectrometry studies. In this work, we report on the generation of radical anions of quinonoid compounds (Q) by electrospray ionization mass spectrometry. The balance between radical anion formation and the deprotonated molecule is also analyzed by influence of the experimental parameters (gas-phase acidity, electron affinity, and reduction potential) and solvent system employed. The gas-phase parameters for formation of radical species and deprotonated species were achieved on the basis of computational thermochemistry. The solution effects on the formation of radical anion (Q(•-)) and dianion (Q(2-)) were evaluated on the basis of cyclic voltammetry analysis and the reduction potentials compared with calculated electron affinities. The occurrence of unexpected ions [Q+15](-) was described as being a reaction between the solvent system and the radical anion, Q(•-). The gas-phase chemistry of the electrosprayed radical anions was obtained by collisional-induced dissociation and compared to the relative energy calculations. These results are important for understanding the formation and reactivity of radical anions and to establish their correlation with the reducing properties by electrospray ionization analyses.

  6. Comparison of the Reactivity of the Three Distonic Isomers of the Pyridine Radical Cation Toward Tetrahydrofuran in Solution and in the Gas Phase

    PubMed Central

    Widjaja, Fanny; Jin, Zhicheng; Nash, John J.; Kenttämaa, Hilkka I.

    2013-01-01

    The reactivity of the three distonic isomers of the pyridine radical cation toward tetrahydrofuran is compared in solution and in the gas phase. In solution, the distonic ions were generated by UV photolysis at 300 nm from iodo-precursors in acidic 50:50 tetrahydrofuran/water solutions. In the gas phase, the ions were generated by collisionally activated dissociation (CAD) of protonated iodo-precursors in an FT-ICR mass spectrometer, as described in the literature. The same major reaction, hydrogen atom abstraction, was observed in solution and in the gas phase. Attempts to cleave the iodine atom from the 2-iodopyridinium cation in the gas phase and in solution yielded the 2-pyridyl cation in addition to the desired 2-dehydropyridinium cation. In the gas phase, this ion was ejected prior to the examination of the desired ion’s chemical properties. This was not possible in solution. This study suggests that solvation effects are not significant for radical reactions of charged radicals. On the other hand, the even-electron ion studied, the 2-pyridyl cation, shows substantial solvation effects. For example, in solution, the 2-pyridyl cation forms a stable adduct with tetrahydrofuran, whereas in the gas phase, only addition/elimination reactions were observed. PMID:23345033

  7. Sustainable Synthesis of Chiral Tetrahydrofurans through the Selective Dehydration of Pentoses

    PubMed Central

    Foster, Robert W; Tame, Christopher J; Bučar, Dejan-Krešimir; Hailes, Helen C; Sheppard, Tom D

    2015-01-01

    l-Arabinose is an abundant resource available as a waste product of the sugar beet industry. Through use of a hydrazone-based strategy, l-arabinose was selectively dehydrated to form a chiral tetrahydrofuran on a multi-gram scale without the need for protecting groups. This approach was extended to other biomass-derived reducing sugars and the mechanism of the key cyclization investigated. This methodology was applied to the synthesis of a range of functionalized chiral tetrahydrofurans, as well as a formal synthesis of 3R-3-hydroxymuscarine. PMID:26407081

  8. Electrospray ionization mass spectrometric studies of some imidazole amidoximes and nitrolic acids and their esters.

    PubMed

    Oresmaa, Larisa; Aulaskari, Paula; Vainiotalo, Pirjo

    2006-01-01

    The fragmentations of the [M+H]+ ions of imidazole amidoximes, and nitrolic acids and their esters, were studied by collision-induced dissociation experiments and by determining the accurate masses of the product ions on an electrospray ionization Fourier transform ion cyclotron resonance mass spectrometer. The fragmentation pathways of the amidoximes varied with the substituent in the imidazole ring at position 1N, allowing two regioisomers to be distinguished. Nitrolic acids decompose in solution to nitrile oxides, and the studied nitrolic acid behaved in the same way in the gas phase. The esters decompose similarly to their parent compounds.

  9. Photoelectron imaging of tetrahydrofuran cluster anions (THF)n- (1<=n<=100)

    NASA Astrophysics Data System (ADS)

    Young, Ryan M.; Yandell, Margaret A.; Niemeyer, Markus; Neumark, Daniel M.

    2010-10-01

    Anionic tetrahydrofuran clusters (THF)n- (1≤n≤100) are studied with photoelectron imaging as gas-phase precursors for electrons solvated in THF. Photoelectron spectra of clusters up to n =5 show two peaks, one of which is attributed to a solvated open chain radical anion and the other to the closed THF ring. At n =6, the spectra change shape abruptly, which become more characteristic of (THF)n- clusters containing solvated electrons. From n =6-100, the vertical detachment energies (VDEs) of these solvated electron clusters increase from 1.96 to 2.71 eV, scaling linearly with n-1/3. For fully deuterated (THF-d8)n- clusters, the apparent transition to a solvated electron cluster is delayed to n =11. Extrapolation of the VDEs to infinite cluster size yields a value of 3.10 eV for the bulk photoelectric threshold. The relatively large VDEs at onset and small stabilization with increasing cluster size compared to other solvated electron clusters may reflect the tendency of the bulk solvent to form preexisting voids that can readily solvate a free electron.

  10. Photoelectron imaging of tetrahydrofuran cluster anions (THF)(n) (-) (1≤n≤100).

    PubMed

    Young, Ryan M; Yandell, Margaret A; Niemeyer, Markus; Neumark, Daniel M

    2010-10-21

    Anionic tetrahydrofuran clusters (THF)(n) (-) (1≤n≤100) are studied with photoelectron imaging as gas-phase precursors for electrons solvated in THF. Photoelectron spectra of clusters up to n=5 show two peaks, one of which is attributed to a solvated open chain radical anion and the other to the closed THF ring. At n=6, the spectra change shape abruptly, which become more characteristic of (THF)(n) (-) clusters containing solvated electrons. From n=6-100, the vertical detachment energies (VDEs) of these solvated electron clusters increase from 1.96 to 2.71 eV, scaling linearly with n(-1/3). For fully deuterated (THF-d8)(n) (-) clusters, the apparent transition to a solvated electron cluster is delayed to n=11. Extrapolation of the VDEs to infinite cluster size yields a value of 3.10 eV for the bulk photoelectric threshold. The relatively large VDEs at onset and small stabilization with increasing cluster size compared to other solvated electron clusters may reflect the tendency of the bulk solvent to form preexisting voids that can readily solvate a free electron.

  11. The inhibition of tetrahydrofuran clathrate-hydrate formation with antifreeze protein

    NASA Astrophysics Data System (ADS)

    Zeng, H.; Wilson, L. D.; Walker, V. K.; Ripmeester, J. A.

    2003-01-01

    The effect of Type I fish antifreeze protein (AFP) from the winter flounder, Pleuronectes americanus (Walbaum), (WfAFP) on the formation of tetrahydrofuran (THF) clathrate hydrate was studied by observing changes in THF crystal morphology and determining the induction time for nucleation. AFP retarded THF clathrate-hydrate growth at the tested temperatures and modified the THF clathrate-hydrate crystal morphology from octahedral to plate-like. AFP appears to be even more effective than the kinetic inhibitor, polyvinylpyrrolidone (PVP). Recombinant AFP from an insect, a spruce budworm, Choristoneura fumiferana (Clem.), moth, (Cf) was also tested for inhibition activity by observation of the THF-hydrate-crystal-growth habit. Like WfAFP, CfAFP appeared to show adsorption on multiple THF-hydrate-crystal faces. A protein with no antifreeze activity, cytochrome C, was used as a control and it neither changed the morphology of the THF clathrate-hydrate crystals, nor retarded the formation of the hydrate. Preliminary experiments on the inhibition activity of WfAFP on a natural gas hydrate assessed induction time and the amount of propane gas consumed. Similar to the observations for THF, the data indicated that WfAFP inhibited propane-hydrate growth. Taken together, these results support our hypothesis that AFPs can inhibit clathrate-hydrate growth and as well, offer promise for the understanding of the inhibition mechanism.

  12. Comparative toxicity of C60 aggregates toward mammalian cells: role of tetrahydrofuran (THF) decomposition.

    PubMed

    Kovochich, Michael; Espinasse, Benjamin; Auffan, Melanie; Hotze, Ernest M; Wessel, Lauren; Xia, Tian; Nel, Andre E; Wiesner, Mark R

    2009-08-15

    C60 fullerene is a promising material because of its unique physiochemical properties. However, previous studies have reported that colloidal aggregates of C60 (nC60) produce toxicity in fish and human cell cultures. The preparation method of nC60 raises questions as to whether the observed effects stem from fullerenes or from the organic solvents used during the preparation of the suspensions. In this paper, we set out to elucidate the mechanism by which tetrahydrofuran (THF) treatment to enhance the preparation of nC60 leads to cytotoxicity in a mouse macrophage cell line. Our results demonstrate that THF/nC60 but not fullerol or aqueous nC60 generates cellular toxicity through a pathway that involves increased intracellular flux and mitochondrial perturbation in RAW 264.7 cells. Interestingly, the supernatant of the THF/n60 suspension rather than the colloidal fullerene aggregates mimics the cytotoxic effects due to the presence of gamma-butyrolactone and formic acid. Thus, the role of nC60 in the cellular responses is likely not due to the direct effect of the nC60 material surface on the cells but is related to the conversion of THF into a toxic byproduct during preparation of the suspension.

  13. Synthesis and structure of two crystalline forms of (cyclooctatetraene)thorium(IV) dichloride-bis(tetrahydrofuran)

    SciTech Connect

    Zalkin, Allan; Templeton, David H.; Le Vanda, Carole; Streitwieser, Andrew

    1980-09-01

    Th(C{sub 8}H{sub 8})Cl{sub 2}(OC{sub 4}H{sub 8}){sub 2} crystallizes in two modifications. The {alpha}-form, space group P2{sub 1}/n, has dimensions: a = 8.589(4) {Angstrom}, b = 27.222(10) {Angstrom}, c = 7.950(4) {Angstrom}, {beta} = 96.92(5){degrees}, Z = 4 and d{sub x} = 1.99 g/cm{sup 3}. The {beta}-form, space group P2{sub 1}/c, has dimensions: a = 13.036(6) {Angstrom}, b = 11.601 (6) {Angstrom}, c = 24.598(10) {Angstrom}, {beta} = 102.90(5) {degrees}, z = 8 and d{sub x} = 2.02 q/cm{sup 3}. The {alpha}-form has one molecule in the asymmetric unit whereas the {beta}-form has two which are chemically equivalent but crystallographically different. The study thus yields three independent determinations of the same molecular structure. Thorium is bonded to the cyclooctatetraene ring, to two chlorine atoms, and to two oxygen atoms from the tetrahydrofuran moieties. Significant distances (averaged) are: Th-Cl = 2.69 {Angstrom}, Th-O = 2.57 {Angstrom}, and Th to plane of C{sub 8}H{sub 8} = 2.02 {Angstrom}.

  14. Case-control study of congenital malformations and occupational exposure to low-level ionizing radiation

    SciTech Connect

    Sever, L.E.; Gilbert, E.S.; Hessol, N.A.; McIntyre, J.M.

    1988-02-01

    In a case-control study, the authors investigated the association of parental occupational exposure to low-level external whole-body penetrating ionizing radiation and risk of congenital malformations in their offspring. Cases and controls were ascertained from births in two counties in southeastern Washington State, where the Hanford Site has been a major employer. A unique feature of this study was the linking of quantitative individual measurement of external whole-body penetrating ionizing radiation exposure of employees at the Hanford Site, using personal dosimeters, and the disease outcome, congenital malformations. The study population included 672 malformation cases and 977 matched controls from births occurring from 1957 through 1980. Twelve specific malformation types were analyzed for evidence of association with employment of the parents at Hanford and with occupational exposure to ionizing radiation. Two defects, congenital dislocation of the hip and tracheoesophageal fistula, showed statistically significant associations with employment of the parents at Hanford, but not with parental radiation exposure. Neural tube defects showed a significant association with parental preconception exposure, on the basis of a small number of cases. Eleven other defects, including Down syndrome, for which an association with radiation was considered most likely, showed no evidence of such an association. When all malformations were analyzed as a group, there was no evidence of an association with employment of the parents at Hanford, but the relation of parental exposure to radiation before conception was in the positive direction (one-tailed p value between 0.05 and 0.10). Given the number of statistical tests conducted, some or all of the observed positive correlations are likely to represent false positive findings. 30 references.

  15. Embryos of the zebrafish Danio rerio in studies of non-targeted effects of ionizing radiation.

    PubMed

    Choi, V W Y; Yu, K N

    2015-01-01

    The use of embryos of the zebrafish Danio rerio as an in vivo tumor model for studying non-targeted effects of ionizing radiation was reviewed. The zebrafish embryo is an animal model, which enables convenient studies on non-targeted effects of both high-linear-energy-transfer (LET) and low-LET radiation by making use of both broad-beam and microbeam radiation. Zebrafish is also a convenient embryo model for studying radiobiological effects of ionizing radiation on tumors. The embryonic origin of tumors has been gaining ground in the past decades, and efforts to fight cancer from the perspective of developmental biology are underway. Evidence for the involvement of radiation-induced genomic instability (RIGI) and the radiation-induced bystander effect (RIBE) in zebrafish embryos were subsequently given. The results of RIGI were obtained for the irradiation of all two-cell stage cells, as well as 1.5 hpf zebrafish embryos by microbeam protons and broad-beam alpha particles, respectively. In contrast, the RIBE was observed through the radioadaptive response (RAR), which was developed against a subsequent challenging dose that was applied at 10 hpf when <0.2% and <0.3% of the cells of 5 hpf zebrafish embryos were exposed to a priming dose, which was provided by microbeam protons and broad-beam alpha particles, respectively. Finally, a perspective on the field, the need for future studies and the significance of such studies were discussed.

  16. Resonantly enhanced multiphoton ionization under XUV FEL radiation: a case study of the role of harmonics

    NASA Astrophysics Data System (ADS)

    Nikolopoulos, G. M.; Lambropoulos, P.

    2015-12-01

    We provide a detailed quantitative study of the possible role of a small admixture of harmonics on resonant two-photon ionization. The motivation comes from the occasional presence of 2nd and 3rd harmonics in FEL radiation. We obtain the dependence of ionic yields on the intensity of the fundamental, the percentage of 2nd harmonic and the detuning of the fundamental from resonance. Having examined the cases of one and two intermediate resonances, we arrive at results of general validity and global behaviour, showing that even a small amount of harmonic may seem deceptively innocuous.

  17. Single-photon double and triple ionization of acetaldehyde (ethanal) studied by multi-electron coincidence spectroscopy

    NASA Astrophysics Data System (ADS)

    Zagorodskikh, S.; Zhaunerchyk, V.; Mucke, M.; Eland, J. H. D.; Squibb, R. J.; Karlsson, L.; Linusson, P.; Feifel, R.

    2015-12-01

    Single-photon multiple ionization processes of acetaldehyde (ethanal) have been experimentally investigated by utilizing a multi-particle coincidence technique based on the time-of-flight magnetic bottle principle, in combination with either a synchrotron radiation source or a pulsed helium discharge lamp. The processes investigated include double and triple ionization in the valence region as well as single and double Auger decay of core-ionized acetaldehyde. The latter are studied site-selectively for chemically different carbon core vacancies, scrutinizing early theoretical predictions specifically made for the case of acetaldehyde. Moreover, Auger processes in shake-up and core-valence ionized states are investigated. In the cases where the processes involve simultaneous emission of two electrons, the distributions of the energy sharing are presented, emphasizing either the knock-out or shake-off mechanism.

  18. A combined electron-ion spectrometer for studying complete kinematics of molecular dissociation upon shell selective ionization

    SciTech Connect

    Saha, K.; Banerjee, S. B.; Bapat, B.

    2013-07-15

    A combined electron-ion spectrometer has been built to study dissociation kinematics of molecular ions upon various electronic decay processes ensuing from ionization of neutral molecules. The apparatus can be used with various ionization agents. Ion time-of-flight (ToF) spectra arising from various electronic decay processes are acquired by triggering the ToF measurement in coincidence with energy analyzed electrons. The design and the performance of the spectrometer in a photoionization experiment is presented in detail. Electron spectra and ion time of flight spectra resulting from valence and 2p{sub 1/2} ionization of Argon and those from valence ionization of CO are presented to demonstrate the capability of the instrument. The fragment ion spectra show remarkable differences (both kinematic and cross sectional) dependent on the energy of the ejected electron, corresponding to various electron loss and decay mechanisms in dissociative photoionization of molecules.

  19. Theoretical study of the fragmentation pathways of norbornane in its doubly ionized ground state.

    PubMed

    Knippenberg, Stefan; Hajgató, Balazs; François, Jean-Pierre; Deleuze, Michael S

    2007-10-25

    The potential energy surface of norbornane in its dicationic singlet ground state has been investigated in detail using density functional theory along with the nonlocal hybrid and gradient-corrected Becke three-parameter Lee-Yang-Parr functional (B3LYP) and the cc-pVDZ basis set. For the sake of more quantitative insight into the chemical reactions induced by double ionization of norbornane, this study was supplemented by a calculation of basic thermodynamic state functions coupled to a focal point analysis of energy differences obtained using correlation treatments and basis sets of improving quality, enabling an extrapolation of these energy differences at the CCSD(T) level in the limit of an asymptotically complete (cc-pV infinity Z) basis set. Our results demonstrate the likelihood of an ultrafast intramolecular rearrangement of the saturated hydrocarbon cage after a sudden removal of two electrons into a kinetically metastable five-membered cyclic C5H8+-CH+-CH3 intermediate, prior to a Coulomb explosion into C5H7+=CH2 and CH3+ fragments, which might explain a tremendous rise of electron-impact (e, 2e) ionization cross sections at electron binding energies around the double-ionization threshold. The first step is straightforward and strongly exothermic (DeltaH298 = -114.0 kcal mol-1). The second step is also exothermic (DeltaH298 = -10.2 kcal mol-1) but requires an activation enthalpy (DeltaH298) of 39.7 kcal/mol. The various factors governing the structure of this intermediate, such as electrostatic interactions, inductive effects, cyclic strains, and methylenic hyperconjugation interactions, are discussed in detail.

  20. Feasibility study of mid-infrared absorption spectroscopy using electrospray ionization

    NASA Astrophysics Data System (ADS)

    Ahmed, Tahsin; Foster, Erick; Bohn, Paul; Howard, Scott

    2016-09-01

    Precise detection of trace amount of molecules, such as the disease biomarkers present in biofluids or explosive residues, requires high sensitivity detection. electrospray ionization-mass spectrometry (ESI-MS) is a common and effective technique for sensitive trace molecular detection in small-volume liquid samples. In ESI-MS, nano-liter volume samples are ionized and aerosolized by ESI, and fed into MS for mass analysis. ESI-MS has proven to be a reliable ionization technique for coupling liquid phase separations like liquid chromatography (LC) and capillary zone electrophoresis (CE) with the highly specific resolving power of MS. While CE and ESI can be performed on a microfluidic chip having a footprint of a few cm2, MS is typically at least 100 times bigger in size than a micro-chip. A reduced size, weight, and power profile would enable semi-portable applications in forensics, environmental monitoring, defense, and biological/pharmaceutical applications. To achieve this goal, we present an initial study evaluating the use of mid-infrared absorption spectroscopy (MIRAS) in place of MS to create a ESI-MIRAS system. To establish feasibility, we perform ESI-MIRAS on phospholipid samples, which have been previously demonstrated to be separable by CE. Phospholipids are biomarkers of degenerative neurological, kidney, and bone diseases and can be found in biofluids such as blood, urine and cerebrospinal fluid. To establish sensitivity limits, calibration samples of 100 μM concentration are electrospray deposited on to a grounded Si wafer for different times (1 minutes to 4 minutes with a 1 minute step). The minimum detectable concentration-time product, where a FTIR globar is used as the MIR source, is found 200 μM·s.

  1. X-Ray Gas Ionization Studies with a Single-Walled Nanotube (SWNT) Sensor

    NASA Astrophysics Data System (ADS)

    Asare Agyapong, Paul

    Due to their high surface areas, Single-Walled Nanotubes (SWNTs) and their thin films, are wonderful media for sensing applications. To establish the radiation sensing mechanism and limits of an SWNT ion sensor, we performed gas ionization studies with an Amptek Mini-x x-ray source. We irradiated the sensor under varying conditions of source to sensor distance, gas concentration, and fill-gas type. The mechanism of the SWNT sensor, which is responsive to the gaseous ions the radiation generates, resembles that of conventional gas filled detectors with reduced power requirements. Additionally, the small size of the sensor favors the development of miniaturized and portable radiation detectors which retain high sensitivity. Sensor responsiveness to radiation, such as x-rays and gamma rays, can be maximized by enclosure in various noble gasses, which are chemically non-reactive, have small magnitudes of ionization potentials, and readily produce charged species when subjected to radiation. When encapsulated with gaseous argon, the SWNT sensors were shown to be up to 246% more sensitive to 1.34 Sv dose of 20 keV x-rays than sensors enclosed in air. The dependence of the sensors' electrical response to fill-gas material helps to push the minimum detection capabilities of this technology to new limits. Optimal performance may result through the use of more readily ionized gasses such as xenon or penning gas mixtures. Through Monte Carlo simulation and PIN diode measurements, the x-ray source intensity was determined and used to establish exposure rates for each test case. These sensors display changes in resistivity when exposed to charged ions, with no direct response to x-rays, gamma rays, and neutron radiation particles.

  2. Electrospray ionization mass spectrometric studies on the characteristic fragmentation of Asp/cyclen conjugates.

    PubMed

    Ma, Chunying; Li, Chao; Luan, Xingrong; Zhang, Jin; Qiao, Renzhong; Zhao, Yufen

    2014-03-30

    Differentiation and structural characterization of Asp/cyclen conjugates by electrospray ionization tandem mass spectrometry (ESI-MS(n)) are significantly important for their biomedical application. Hence, the present study is conducted. The fragmentations of Asp/cyclen conjugates generated by positive ion mode electrospray ionization were examined here by low-energy collision-induced dissociation (CID). ESI-MS(n) spectra of cyclen were acquired to confirm cyclen contraction products derived from the studied compounds. The fragments derived from the Asp/cyclen conjugates were proved by deuterium-exchange experiments. Asp/cyclen conjugates displayed characteristic dissociation pathways, including cleavages of amide bonds, loss of NH3 and cyclen contraction pathways. It was observed that cleavages of C-terminal amide bonds generated b2 and b2  + H2O ions from the protonated CyclenAspAspAsp and a b1  + H2O ion from the protonated CyclenAspAsp. In addition, various cyclen contraction products were also observed. In ESI-MS(n) spectra of studied compounds, fragments of bn-1  + H2O or cyclic anhydride were generated due to facile mobilization of C-terminal or side-chain COOH protons. In addition, the cyclen contraction products were detected. These results might provide sufficient information for the identification of Asp/cyclen conjugates by mass spectrometry. Copyright © 2014 John Wiley & Sons, Ltd.

  3. Manipulation of a Schlenk Line: Preparation of Tetrahydrofuran Complexes of Transition-Metal Chlorides

    ERIC Educational Resources Information Center

    Davis, Craig M.; Curran, Kelly A.

    2007-01-01

    Before taking an inorganic laboratory course few students have experience handling air-sensitive materials using Schlenk techniques. This exercise introduces them to techniques they will employ in later syntheses. The procedure involves the formation of anhydrous tetrahydrofuran complexes of transition-metal chlorides from metal-chloride hydrates;…

  4. Manipulation of a Schlenk Line: Preparation of Tetrahydrofuran Complexes of Transition-Metal Chlorides

    ERIC Educational Resources Information Center

    Davis, Craig M.; Curran, Kelly A.

    2007-01-01

    Before taking an inorganic laboratory course few students have experience handling air-sensitive materials using Schlenk techniques. This exercise introduces them to techniques they will employ in later syntheses. The procedure involves the formation of anhydrous tetrahydrofuran complexes of transition-metal chlorides from metal-chloride hydrates;…

  5. Analysis of HIF-1 inhibition by manassantin A and analogues with modified tetrahydrofuran configurations

    PubMed Central

    Kasper, Amanda C.; Moon, Eui Jung; Hu, Xiangqian; Park, Yongho; Wooten, Ceshea M.; Kim, Hyoungsu; Yang, Weitao; Dewhirst, Mark W.; Hong, Jiyong

    2009-01-01

    We have shown that manassantin A downregulated the HIF-1α expression and inhibited the secretion of VEGF. We have also demonstrated that the 2,3-cis-3,4-trans-4,5-cis-configuration of the tetrahydrofuran is critical to the HIF-1 inhibition of manassantin A. PMID:19423348

  6. Analysis of HIF-1 inhibition by manassantin A and analogues with modified tetrahydrofuran configurations.

    PubMed

    Kasper, Amanda C; Moon, Eui Jung; Hu, Xiangqian; Park, Yongho; Wooten, Ceshea M; Kim, Hyoungsu; Yang, Weitao; Dewhirst, Mark W; Hong, Jiyong

    2009-07-15

    We have shown that manassantin A downregulated the HIF-1alpha expression and inhibited the secretion of VEGF. We have also demonstrated that the 2,3-cis-3,4-trans-4,5-cis-configuration of the tetrahydrofuran is critical to the HIF-1 inhibition of manassantin A.

  7. Valence ionized states of iron pentacarbonyl and eta5-cyclopentadienyl cobalt dicarbonyl studied by symmetry-adapted cluster-configuration interaction calculation and collision-energy resolved Penning ionization electron spectroscopy.

    PubMed

    Fukuda, Ryoichi; Ehara, Masahiro; Nakatsuji, Hiroshi; Kishimoto, Naoki; Ohno, Koichi

    2010-02-28

    Valence ionized states of iron pentacarbonyl Fe(CO)(5) and eta(5)-cyclopentadienyl cobalt dicarbonyl Co(eta(5)-C(5)H(5))(CO)(2) have been studied by ultraviolet photoelectron spectroscopy, two-dimensional Penning ionization electron spectroscopy (2D-PIES), and symmetry-adapted cluster-configuration interaction calculations. Theory provided reliable assignments for the complex ionization spectra of these molecules, which have metal-carbonyl bonds. Theoretical ionization energies agreed well with experimental observations and the calculated wave functions could explain the relative intensities of PIES spectra. The collision-energy dependence of partial ionization cross sections (CEDPICS) was obtained by 2D-PIES. To interpret these CEDPICS, the interaction potentials between the molecules and a Li atom were examined in several coordinates by calculations. The relation between the slope of the CEDPICS and the electronic structure of the ionized states, such as molecular symmetry and the spatial distribution of ionizing orbitals, was analyzed. In Fe(CO)(5), an attractive interaction was obtained for the equatorial CO, while the interaction for the axial CO direction was repulsive. For Co(eta(5)-C(5)H(5))(CO)(2), the interaction potential in the direction of both Co-C-O and Co-Cp ring was attractive. These anisotropic interactions and ionizing orbital distributions consistently explain the relative slopes of the CEDPICS.

  8. Valence ionization spectra of group six metal hexacarbonyls studied by the symmetry-adapted cluster-configuration interaction method.

    PubMed

    Fukuda, Ryoichi; Hayaki, Seigo; Nakatsuji, Hiroshi

    2009-11-07

    The valence ionization spectra up to 20 eV of group six metal carbonyls, chromium hexacarbonyl, molybdenum hexacarbonyl, and tungsten hexacarbonyl were studied by the symmetry-adapted cluster-configuration interaction (SAC-CI) method. The assignments of the spectra are given based on reliable SAC-CI calculations. The relativistic effects including the spin-orbit effects are important for the ionization spectrum of W(CO)(6). The relation between the metal-CO distance and ionization energies was examined. The lowest ionization energies of the three metal carbonyls are approximately the same because of the energy dependence of the metal-CO length and relativistic effects. In Cr(CO)(6), the Cr-CO interaction significantly increases the lowest ionization energy in comparison with Mo(CO)(6) and W(CO)(6) because of the relatively short metal-CO bond length. The relativistic effect reduces the lowest ionization energy of W(CO)(6) because the effective core potential of 5d electrons is more efficiently screened as a result of the relativistic contraction of the inner electrons.

  9. Epidemiologic Study of One Million American Workers and Military Veterans Exposed to Ionizing Radiation

    SciTech Connect

    Boice, John D.

    2015-02-27

    A pilot study was completed demonstrating the feasibility of conducting an epidemiologic study assessing cancer and other disease mortality among nearly one million US veterans and workers exposed to ionizing radiation, a population 10 times larger than atomic bomb survivor study with high statistical power to evaluate low dose rate effects. Among the groups enumerated and/or studied were: (1) 194,000 Department of Energy Uranium Workers; (2) 6,700 Rocketdyne Radiation Workers; (3) 7,000 Mound Radiation Workers; (4) 156,000 DOE Plutonium Workers; (5) 212,000 Nuclear Power Plant Workers; (6) 130,000 Industrial Radiography Workers; (7) 1.7 million Medical Workers and (8) 135,000 Atomic Veterans.

  10. Studies of ground-state dynamics in isolated species by ionization-detected stimulated Raman techniques

    SciTech Connect

    Felker, P.M.

    1993-12-01

    First, the author aims to develop methods of nonlinear Raman spectroscopy for application in studies of sparse samples. Second, the author wishes to apply such methods to structural and dynamical studies of species (molecules, complexes, and clusters) in supersonic molecular beams. In the past year, the author has made progress in several areas. The first pertains to the application of mass-selective ionization-detected stimulated Raman spectroscopies (IDSRS) to the size-specific vibrational spectroscopy of solute-solvent{sub n} clusters. The second involves the application of IDSRS methods to studies of jet-cooled benzene clusters. The third pertains to the use of IDSRS methods in the study of intermolecular vibrational transitions in van der Waals complexes.

  11. Spectral analysis of ionized noble gases and implications for astronomy and laser studies

    NASA Astrophysics Data System (ADS)

    Almandos, J. Reyna; Bredice, F.; Raineri, M.; Gallardo, M.

    2009-05-01

    Studies of emission spectra of noble gas ions have been carried out in La Plata for more than 35 years, several of them in collaboration with other groups. Knowledge of the wavelengths, intensities and shapes of the lines of different species of neon, argon, krypton and xenon in intermediate and high degrees of ionization is important not only to study plasma conditions, but also to help in the understanding of laser emission mechanisms. With the purpose of continuing this line of work we present an overview of some studies concerning the spectral analysis of several ions of noble gases with implications for astronomy and laser studies. The spectra were recorded from the vacuum ultraviolet to infrared regions, using pulsed discharges. In some cases time-series observations were made. Earlier analyses for these ions were revised and extended. New energy levels, classified lines and oscillator strengths were established. The results of these analyses were supported by using relativistic Hartree-Fock calculations.

  12. Recent advances in the study of ionizing radiation damage and repair.

    PubMed

    Arrand, J E; Michael, B D

    1992-06-01

    This workshop, organized under the auspices of the EC Concerted Action Programme on DNA Repair and Cancer, was held at the CRC Gray Laboratory, Northwood, Middlesex, UK, 23-25 October 1991. The 42 participants were drawn mainly from laboratories participating in the EC Concerted Action, with a few visitors from elsewhere. The discussions centred on the increasing convergence of classical radiobiology and biophysics with molecular biology and mammalian cell genetics to study mechanisms of DNA strand break accumulation and repair following exposure to ionizing radiation. There was a strong emphasis on the application of this research both to cancer radiotherapy and to detection of individuals at risk from cancer due to exposure to ionizing radiation. The first two days were organized as six workshop sessions; on the third day we joined forces with Julie Denekamp and dedicated a session to the memory of our late friend and colleague, Nic McNally. The rest of this day was devoted to reviews by his colleagues and collaborators of the fields of research to which he contributed so much. An evening of music and readings, organized by Joanna and Rachel McNally, completed the memorial. Here we review the first seven sessions of the workshop, emphasizing the more recent approaches and the new information they have given us.

  13. Heterogeneous clusters as a model system for the study of ionization dynamics within tampered samples

    SciTech Connect

    Ziaja, B.; Chapman, H. N.; Santra, R.; Laarmann, T.; Weckert, E.; Bostedt, C.; Moeller, T.

    2011-09-15

    Tampering of a sample with a layer of another material is a promising technique to slow down the expansion dynamics within laser irradiated samples, with sound implications for single-particle diffraction imaging. Ideally, if an imaged object is covered by a layer of another material, during the irradiation this layer will be primarily ionized and will expand fast due to Coulomb repulsion, whereas the object located within the net neutral core will expand more slowly (hydrodynamically). We investigate the details of the electronic damage within the tampered samples during their irradiation with an intense extreme ultraviolet (EUV) pulse. We study heterogeneous clusters composed of noble gas atoms, Xe and Ar, for which chemical-bond effects can be neglected. Using a fully nonequilibrium kinetic equation code, we demonstrate the influence of cluster composition on ionization dynamics; in particular, on the electronic damage. The results are obtained for the wavelength of 32 nm, which is available at the free-electron laser in Hamburg (FLASH) facility, but our conclusions can also have implications for samples with a more complex structure and irradiated at a much shorter wavelength.

  14. Studying the chemistry of cationized triacylglycerols using electrospray ionization mass spectrometry and density functional theory computations.

    PubMed

    Grossert, J Stuart; Cubero Herrera, Lisandra; Ramaley, Louis; Melanson, Jeremy E

    2014-08-01

    Analysis of triacylglycerols (TAGs), found as complex mixtures in living organisms, is typically accomplished using liquid chromatography, often coupled to mass spectrometry. TAGs, weak bases not protonated using electrospray ionization, are usually ionized by adduct formation with a cation, including those present in the solvent (e.g., Na(+)). There are relatively few reports on the binding of TAGs with cations or on the mechanisms by which cationized TAGs fragment. This work examines binding efficiencies, determined by mass spectrometry and computations, for the complexation of TAGs to a range of cations (Na(+), Li(+), K(+), Ag(+), NH4(+)). While most cations bind to oxygen, Ag(+) binding to unsaturation in the acid side chains is significant. The importance of dimer formation, [2TAG + M](+) was demonstrated using several different types of mass spectrometers. From breakdown curves, it became apparent that two or three acid side chains must be attached to glycerol for strong cationization. Possible mechanisms for fragmentation of lithiated TAGs were modeled by computations on tripropionylglycerol. Viable pathways were found for losses of neutral acids and lithium salts of acids from different positions on the glycerol moiety. Novel lactone structures were proposed for the loss of a neutral acid from one position of the glycerol moiety. These were studied further using triple-stage mass spectrometry (MS(3)). These lactones can account for all the major product ions in the MS(3) spectra in both this work and the literature, which should allow for new insights into the challenging analytical methods needed for naturally occurring TAGs.

  15. Studying the Chemistry of Cationized Triacylglycerols Using Electrospray Ionization Mass Spectrometry and Density Functional Theory Computations

    NASA Astrophysics Data System (ADS)

    Grossert, J. Stuart; Herrera, Lisandra Cubero; Ramaley, Louis; Melanson, Jeremy E.

    2014-08-01

    Analysis of triacylglycerols (TAGs), found as complex mixtures in living organisms, is typically accomplished using liquid chromatography, often coupled to mass spectrometry. TAGs, weak bases not protonated using electrospray ionization, are usually ionized by adduct formation with a cation, including those present in the solvent (e.g., Na+). There are relatively few reports on the binding of TAGs with cations or on the mechanisms by which cationized TAGs fragment. This work examines binding efficiencies, determined by mass spectrometry and computations, for the complexation of TAGs to a range of cations (Na+, Li+, K+, Ag+, NH4 +). While most cations bind to oxygen, Ag+ binding to unsaturation in the acid side chains is significant. The importance of dimer formation, [2TAG + M]+ was demonstrated using several different types of mass spectrometers. From breakdown curves, it became apparent that two or three acid side chains must be attached to glycerol for strong cationization. Possible mechanisms for fragmentation of lithiated TAGs were modeled by computations on tripropionylglycerol. Viable pathways were found for losses of neutral acids and lithium salts of acids from different positions on the glycerol moiety. Novel lactone structures were proposed for the loss of a neutral acid from one position of the glycerol moiety. These were studied further using triple-stage mass spectrometry (MS3). These lactones can account for all the major product ions in the MS3 spectra in both this work and the literature, which should allow for new insights into the challenging analytical methods needed for naturally occurring TAGs.

  16. Resonance ionization mass spectrometric study of the promethium/samarium isobaric pair

    SciTech Connect

    Shaw, R.W.; Young, J.P.; Smith, D.H.

    1988-01-01

    Samarium daughters are problematic in isotope ratio measurements of promethium because they are isobaric. Resonance ionization mass spectrometry was utilized to circumvent this problem. An ionization selectivity factor of at least 1000:1 has been measured for promethium over samarium at 584.6 nm. Resonance ionization spectra have been recorded for both elements over the 528-560 and 580-614 nm wavelength ranges.

  17. Study of bis(bibenzyls) in bryophytes using electron ionization time-of-flight and electrospray ionization triple-quadrupole mass spectrometry.

    PubMed

    Guo, Huaifang; Xing, Jie; Xie, Chunfeng; Qu, Jianbo; Gao, Yanhui; Lou, Hongxiang

    2007-01-01

    A detailed analysis of mass spectra generated from bis(bibenzyl) compounds in bryophytes under electron ionization time-of-flight (EI-TOF) and electrospray ionization triple-quadrupole (ESI-TQ) mass spectrometry conditions is reported. Proposed structures of the fragment ions were obtained by tracking the functional groups of 15 bis(bibenzyls), the structures of which are similar except for some alkoxyl substituents and linkage sites of biphenyl ether bonds. The elucidation was aided by the use of accurate mass measurements. Attempts have been made to provide rational pathways for the formation of these fragment ions, and a generalized fragmentation mechanism is proposed. The bis(bibenzyls) mentioned in this study include three types according to their structure characteristics, i.e. one biphenyl ether bond (A-type), two biphenyl ether bonds (B-type), one biphenyl ether and one biphenyl bond (C-type). The three types display different EI-MS and ESI-MS/MS product profiles, by which the bis(bibenzyl) type and the number of alkoxyl substituents can be identified. Isomers of bis(bibenzyls) can be differentiated to some extent, while the linkage sites of biphenyl ether bonds are difficult to identify. The structure-fragmentation relationships will facilitate the characterization of other bis(bibenzyls) and this will be of value for the high-throughput screening of novel bis(bibenzyls) in bryophytes.

  18. Single and double ionization of magnesium by electron impact: A classical study

    NASA Astrophysics Data System (ADS)

    Dubois, J.; Berman, S. A.; Chandre, C.; Uzer, T.

    2017-02-01

    We consider electron impact-driven single and double ionization of magnesium in the energy range of 10 to 100 eV. Our classical Hamiltonian model of these (e ,2 e ) and (e ,3 e ) processes sheds light on their total cross sections and reveals the underlying ionization mechanisms. Two pathways are at play in single ionization: delayed and direct. In contrast, only the direct process is observed in double ionization, ruling out the excitation-autoionization channel. We also provide evidence that the so-called Two-Step 2 mechanism predominates over the Two-Step 1 mechanism, in agreement with experiments.

  19. Absolute vibrational cross sections for 1-19 eV electron scattering from condensed tetrahydrofuran (THF)

    NASA Astrophysics Data System (ADS)

    Lemelin, V.; Bass, A. D.; Cloutier, P.; Sanche, L.

    2016-02-01

    Absolute cross sections (CSs) for vibrational excitation by 1-19 eV electrons impacting on condensed tetrahydrofuran (THF) were measured with a high-resolution electron energy loss spectrometer. Experiments were performed under ultra-high vacuum (3 × 10-11 Torr) at a temperature of about 20 K. The magnitudes of the vibrational CSs lie within the 10-17 cm2 range. Features observed near 4.5, 9.5, and 12.5 eV in the incident energy dependence of the CSs were compared to the results of theoretical calculations and other experiments on gas and solid-phase THF. These three resonances are attributed to the formation of shape or core-excited shape resonances. Another maximum observed around 2.5 eV is not found in the calculations but has been observed in gas-phase studies; it is attributed to the formation of a shape resonance.

  20. Absolute vibrational cross sections for 1–19 eV electron scattering from condensed tetrahydrofuran (THF)

    PubMed Central

    Lemelin, V.; Bass, A. D.; Cloutier, P.; Sanche, L.

    2016-01-01

    Absolute cross sections (CSs) for vibrational excitation by 1–19 eV electrons impacting on condensed tetrahydrofuran (THF) were measured with a high-resolution electron energy loss spectrometer. Experiments were performed under ultra-high vacuum (3 × 10−11 Torr) at a temperature of about 20 K. The magnitudes of the vibrational CSs lie within the 10−17 cm2 range. Features observed near 4.5, 9.5, and 12.5 eV in the incident energy dependence of the CSs were compared to the results of theoretical calculations and other experiments on gas and solid-phase THF. These three resonances are attributed to the formation of shape or core-excited shape resonances. Another maximum observed around 2.5 eV is not found in the calculations but has been observed in gas-phase studies; it is attributed to the formation of a shape resonance. PMID:26896993

  1. Theoretical study of γ-aminobutyric acid conformers: Intramolecular interactions and ionization energies

    NASA Astrophysics Data System (ADS)

    Wang, Ke-Dong; Wang, Mei-Ting; Meng, Ju

    2014-10-01

    Allowing for all combinations of internal single-bond rotamers, 1,296 unique trial structures of γ-Aminobutyric acid (GABA) are obtained. All of these structures are optimized at the M06-2X level of theory and a total of 68 local minimal conformers are found. The nine low-lying conformers are used for further studies. According to the calculated relative Gibbs free energies at M06-2X level of theory, we find that the dispersion is important for the relative energy of GABA. The intramolecular hydrogen bonds and hyperconjugative interaction and their effects on the conformational stability are studied. The results show that both of them have great influence on the conformers. The vertical ionization energies (VIE) are calculated and match the experimental data well. The results show that the neutral GABA in the gas phase is a multi-conformer system and at least four conformations exist.

  2. Study of multi-electron ionization and charge exchange in HIBF

    NASA Astrophysics Data System (ADS)

    Wu, Linchun

    Beam ion stripping on background gases or plasma in a Heavy Ion Beam Fusion (HIBF) chamber increases the charge state of the beam and the diameter of the focus, complicating the final focusing on the focusing target. To model beam transport in the chamber, it is necessary to know the beam charge-state evolution, including both ionization and charge exchange dynamics. The main objective of this research is to explore theoretical approaches including scaling law. Improved models are developed to calculate multi-electron loss, especially ion stripping and charge exchange cross sections, for both near-term experiments and future power plant scale HIBF research. First, a new space-charge neutralization approach that uses electron injection is proposed for the ion beam transport in HIBF chamber. An analytical study was performed to illustrate the plasma dynamics and final neutralization effects with this technique. The results examine the effect of different injected electron profiles. Next, to improve the accuracy of such simulations, methods to improve cross sections of ionization and charge exchange are studied. Both classical and quantum mechanical approaches are examined. Attention is focused on the interaction by low-charge-state heavy ions. Multi-electron processes for dressed ions, including screening and anti-screening effects, internuclear forces, are given special attention, This analysis is complex and requires a combining several different theoretical approaches. Finally, a Classic Trajectory Monte Carlo (CTMC) model based on an improvement of Olson's n-body CTMC method is presented. This model solves the n-body ion-atom ionization problem in a regime of intent to HIBF. In the paper, a new and complete computational module for these interactions has been developed. The cross section data for Xe, Cs, and Bi ions colliding with various background gases (Xe, N2, Ar and Flibe) is presented. After the calculation of the cross section data, the predicted energy

  3. A study to control chemical reactions using Si:2p core ionization: site-specific fragmentation.

    PubMed

    Nagaoka, Shin-ichi; Fukuzawa, Hironobu; Prümper, Georg; Takemoto, Mai; Takahashi, Osamu; Yamaguchi, Katsuhiro; Kakiuchi, Takuhiro; Tabayashi, Kiyohiko; Suzuki, Isao H; Harries, James R; Tamenori, Yusuke; Ueda, Kiyoshi

    2011-08-18

    In an aim to create a "sharp" molecular knife, we have studied site-specific fragmentation caused by Si:2p core photoionization of bridged trihalosilyltrimethylsilyl molecules in the vapor phase. Highly site-specific bond dissociation has been found to occur around the core-ionized Si site in some of the molecules studied. The site specificity in fragmentation and the 2p binding energy difference between the two Si sites depend in similar ways on the intersite bridge and the electronegativities of the included halogen atoms. The present experimental and computational results show that for efficient "cutting" the following conditions for the two atomic sites to be separated by the knife should be satisfied. First, the sites should be located far from each other and connected by a chain of saturated bonds so that intersite electron migration can be reduced. Second, the chemical environments of the atomic sites should be as different as possible.

  4. Charge transfer to solvent dynamics in iodide aqueous solution studied at ionization threshold.

    PubMed

    Kothe, Alexander; Wilke, Martin; Moguilevski, Alexandre; Engel, Nicholas; Winter, Bernd; Kiyan, Igor Yu; Aziz, Emad F

    2015-01-21

    We explore the early-time electronic relaxation in NaI aqueous solution exposed to a short UV laser pulse. Rather than initiating the charge transfer reaction by resonant photoexcitation of iodide, in the present time-resolved photoelectron spectroscopy study the charge-transfer-to-solvent (CTTS) states are populated via electronic excitation above the vacuum level. By analyzing the temporal evolution of electron yields from ionization of two transient species, assigned to CTTS and its first excited state, we determine both their ultrafast population and relaxation dynamics. Comparison with resonant-excitation studies shows that the highly excited initial states exhibit similar relaxation characteristics as found for resonant excitation. Implications for structure and dynamical response of the hydration cage are discussed.

  5. Double ionization of helium by bare ions: Theoretical study of the fully differential cross sections

    SciTech Connect

    Lopez, S. D.; Garibotti, C. R.; Otranto, S.

    2011-06-15

    This work presents a theoretical study of fully differential cross sections (FDCSs) for the double ionization of an He target by ion impact within a distorted wave model. The initial atomic system is described by two approximated wave functions of different accuracy proposed by Bonham and Kohl. For the final channel several models are considered based upon improvements and simplifications of the well-known three-body Coulomb (3C) model. The influence of the receding projectile on the resulting fragments is also studied by implementing a model with effective charges that depend on the momenta of the four particles. The FDCSs resulting for different electron energy sharing are discussed. The sensitivity of the FDCSs to the projectile charge sign and magnitude is explored over the energy range 700 keV/amu through 6 MeV/amu.

  6. Double and single ionization of He and other targets studied using cold target recoil momentum spectroscopy

    SciTech Connect

    Doerner, R.; Feagin, J. M.; Brauning, H.; Jagutzki, O.; Jung, M.; Kanter, E. P.; Khemliche, H.; Kravis, S.; Mergel, V.; Prior, M. H.; Schmidt-Boeking, H.; Spielberger, L.; Ullrich, J.; Unverzagt, M.; Vogt, T.

    1997-04-01

    Double ionization of an atom by a single photon is the simplest and most fundamental many-electron process. The ejection of two electrons following the absorption of one photon is strictly prohibited in an independent electron approximation. Thus determining the probability of double photoionization alone is already a challenging test of the understanding of electron-electron correlation. Furthermore, in the slow breakup of a bound system into three charged particles, the final state wave function must represent a high degree of few-body Coulomb correlation involving the simultaneous interaction of all three particles. The case of double photoionization is again particularly well suited to study this problem as the energy and the angular momentum delivered to the system can be very well controlled. Helium, as the most basic three body system, has been the target of extensive studies over the past decades. The purpose of this project has been to study double and single ionization using cold target recoil ion momentum spectroscopy (COLTRIMS). This technique has been widely applied within the area of ion-atom collisions to study the dynamics of energy and momentum transfer in collisions between few-electron systems, and the entire technical machinery has been transferred to photon-atom collisions. The technique uses space- and time-imaging of He{sup +} and He{sup ++} recoil ions created in photon-He collisions to measure the full momentum vector of each ion produced. Event-mode recording is used and a solid angle of nearly 4{pi} is realized, allowing an extremely high data-collection efficiency. In order to reduce the initial momentum spread of the He target a precooled supersonic He jet is used.

  7. Ionizable Nitroxides for Studying Local Electrostatic Properties of Lipid Bilayers and Protein Systems by EPR

    PubMed Central

    Voinov, Maxim A.; Smirnov, Alex I.

    2016-01-01

    Electrostatic interactions are known to play one of the major roles in the myriad of biochemical and biophysical processes. In this Chapter we describe biophysical methods to probe local electrostatic potentials of proteins and lipid bilayer systems that is based on an observation of reversible protonation of nitroxides by EPR. Two types of the electrostatic probes are discussed. The first one includes methanethiosulfonate derivatives of protonatable nitroxides that could be used for highly specific covalent modification of the cysteine’s sulfhydryl groups. Such spin labels are very similar in magnetic parameters and chemical properties to conventional MTSL making them suitable for studying local electrostatic properties of protein-lipid interfaces. The second type of EPR probes is designed as spin-labeled phospholipids having a protonatable nitroxide tethered to the polar head group. The probes of both types report on their ionization state through changes in magnetic parameters and a degree of rotational averaging, thus, allowing one to determine the electrostatic contribution to the interfacial pKa of the nitroxide, and, therefore, determining the local electrostatic potential. Due to their small molecular volume these probes cause a minimal perturbation to the protein or lipid system while covalent attachment secure the position of the reporter nitroxides. Experimental procedures to characterize and calibrate these probes by EPR and also the methods to analyze the EPR spectra by least-squares simulations are also outlined. The ionizable nitroxide labels and the nitroxide-labeled phospholipids described so far cover an exceptionally wide pH range from ca. 2.5 to 7.0 pH units making them suitable to study a broad range of biophysical phenomena especially at the negatively charged lipid bilayer surfaces. The rationale for selecting proper electrostatically neutral interface for calibrating such probes and example of studying surface potential of lipid bilayer is

  8. One- and two-photon ionization of DNA single and double helices studied by laser flash photolysis at 266 nm.

    PubMed

    Marguet, Sylvie; Markovitsi, Dimitra; Talbot, Francis

    2006-06-15

    The ionization of the DNA single and double helices (dA)20, (dT)20, (dAdT)10(dAdT)10 and (dA)20(dT)20, induced by nanosecond pulses at 266 nm, is studied by time-resolved absorption spectroscopy. The variation of the hydrated electron concentration with the absorbed laser intensity shows that, in addition to two-photon ionization, one-photon ionization takes place for (dAdT)10(dAdT)10, (dA)20(dT)20 and (dA)20 but not for (dT)20. The spectra of all adenine-containing oligomers at the microsecond time-scale correspond to the adenine deprotonated radical formed in concentrations comparable to that of the hydrated electron. The quantum yield for one-photon ionization of the oligomers (ca. 10(-3)) is higher by at least 1 order of magnitude than that of dAMP, showing clearly that organization of the bases in single and double helices leads to an important lowering of the ionization potential. The propensity of (dAdT)10(dAdT)10, containing alternating adenine-thymine sequences, to undergo one-photon ionization is lower than that of (dA)20(dT)20 and (dA)20, containing adenine runs. Pairing of the (dA)20 with the complementary strand leads to a decrease of quantum yield for one photon ionization by about a factor of 2.

  9. Time-dependent density-functional-theory study of the suppressed tunneling ionization of vanadium

    NASA Astrophysics Data System (ADS)

    Chu, Xi; Groenenboom, Gerrit C.

    2016-11-01

    Using a time-dependent density-functional-theory (TDDFT) method that incorporates the exact exchange, we reproduce the measured ionization suppression for vanadium in 1500-nm lasers of 1.4 to 2.8 ×1013W /cm2 . The calculated ionization yields are 0.07 to 0.5 in 100 fs sin2 pulses. For weaker laser intensities a method with more configurations is needed to properly describe the multiphoton, rather than tunneling, ionization of a transition-metal atom. Our calculations show that the isotropic component of the induced potential increases the binding energy of the electron while the dipole component elevates the potential barrier of tunneling ionization. Both effects suppress the tunneling ionization.

  10. Rectilinear six-dimensional ionization cooling channel for a muon collider: A theoretical and numerical study

    DOE PAGES

    Stratakis, Diktys; Palmer, Robert B.

    2015-03-06

    A Muon Collider requires a reduction of the six-dimensional emittance of the captured muon beam by several orders of magnitude. In this study, we describe a novel rectilinear cooling scheme that should meet this requirement. First, we present the conceptual design of our proposed scheme wherein we detail its basic features. Then, we establish the theoretical framework to predict and evaluate the performance of ionization cooling channels and discuss its application to our specific case. In conclusion, we present the first end-to-end simulation of 6D cooling for a Muon Collider and show a notable reduction of the 6D emittance bymore » five orders of magnitude. We find good agreement between simulation and theory.« less

  11. A review of certain low-level ionizing radiation studies in mice and guinea pigs.

    PubMed

    Congdon, C C

    1987-05-01

    Starting in the early 1940s, Egon Lorenz and collaborators at the National Cancer Institute began an extended study of chronic low-level ionizing radiation effects in what was then the tolerance range for man. Observations on life span, body weight and radiation carcinogenesis, among others, were made in mice, guinea pigs and rabbits. At the then-permissible exposure level, 0.1 R** per 8-h day until natural death, experimental mice and guinea pigs had a slightly greater mean life span compared to control animals. In addition, there was marked weight gain during the growth phase in both species. Increased tumor incidence was also observed at the 0.1-R level in mice. The primary hypothesis for increased median life span has been rebound regenerative hyperplasia during the early part of the exposure; in the presence of continuing injury, there is physiological enhancement of defense mechanisms against intercurrent infection. The body weight gain has not been explained.

  12. Fragmentation dynamics of ionized neon trimer inside helium nanodroplets: a theoretical study.

    PubMed

    Bonhommeau, David; Viel, Alexandra; Halberstadt, Nadine

    2004-06-22

    We report a theoretical study of the fragmentation dynamics of Ne(3) (+) inside helium nanodroplets, following vertical ionization of the neutral neon trimer. The motion of the neon atoms is treated classically, while transitions between the electronic states of the ionic cluster are treated quantum mechanically. A diatomics-in-molecules description of the potential energy surfaces is used, in a minimal basis set consisting of three effective p orbitals on each neon atom for the missing electron. The helium environment is modeled by a friction force acting on the neon atoms when their speed exceeds the Landau velocity. A reasonable range of values for the corresponding friction coefficient is obtained by comparison with existing experimental measurements.

  13. Study of total ionizing dose radiation effects on enclosed gate transistors in a commercial CMOS technology

    NASA Astrophysics Data System (ADS)

    Li, Dong-Mei; Wang, Zhi-Hua; Huangfu, Li-Ying; Gou, Qiu-Jing

    2007-12-01

    This paper studies the total ionizing dose radiation effects on MOS (metal-oxide-semiconductor) transistors with normal and enclosed gate layout in a standard commercial CMOS (compensate MOS) bulk process. The leakage current, threshold voltage shift, and transconductance of the devices were monitored before and after γ-ray irradiation. The parameters of the devices with different layout under different bias condition during irradiation at different total dose are investigated. The results show that the enclosed layout not only effectively eliminates the leakage but also improves the performance of threshold voltage and transconductance for NMOS (n-type channel MOS) transistors. The experimental results also indicate that analogue bias during irradiation is the worst case for enclosed gate NMOS. There is no evident different behaviour observed between normal PMOS (p-type channel MOS) transistors and enclosed gate PMOS transistors.

  14. Experimental and theoretical study on nonsequential double ionization of carbon disulfide in strong near-IR laser fields

    NASA Astrophysics Data System (ADS)

    Zuo, Wanlong; Ben, Shuai; Lv, Hang; Zhao, Lei; Guo, Jing; Liu, Xue-Shen; Xu, Haifeng; Jin, Mingxing; Ding, Dajun

    2016-05-01

    Nonsequential double ionization (NSDI) of carbon disulfide CS2 in strong 800-nm laser fields is studied experimentally and theoretically. A knee structure is observed in the intensity-dependent double ionization (DI) yield in linearly polarized laser fields, which exhibits a strong dependence on the laser ellipticity. The electron momentum distributions and energy trajectories after DI in both linearly and circularly polarized laser fields are investigated by employing the two-dimensional classical ensemble method. The results clearly show the evidence of NSDI in the strong-field DI of CS2 molecules. It is demonstrated that, similar to that of atoms, NSDI of CS2 molecules is produced via laser-driven electron recollision with the ion core and presents electron-electron correlations in the process. Analysis indicates that both mechanisms in atomic strong-field NSDI, i.e., recollision impact ionization and recollision excitation with subsequent ionization, may also be contributed to NSDI of CS2 in strong laser fields. Further studies are no doubt necessary for a full understanding of the underlying physical mechanism of molecular strong-field NSDI, due to the multicenter character of the molecular structure and the complex molecular excited states that could be involved in the ionization.

  15. Atmospheric pressure chemical ionization studies of non-polar isomeric hydrocarbons using ion mobility spectrometry and mass spectrometry with different ionization techniques

    NASA Technical Reports Server (NTRS)

    Borsdorf, H.; Nazarov, E. G.; Eiceman, G. A.

    2002-01-01

    The ionization pathways were determined for sets of isomeric non-polar hydrocarbons (structural isomers, cis/trans isomers) using ion mobility spectrometry and mass spectrometry with different techniques of atmospheric pressure chemical ionization to assess the influence of structural features on ion formation. Depending on the structural features, different ions were observed using mass spectrometry. Unsaturated hydrocarbons formed mostly [M - 1]+ and [(M - 1)2H]+ ions while mainly [M - 3]+ and [(M - 3)H2O]+ ions were found for saturated cis/trans isomers using photoionization and 63Ni ionization. These ionization methods and corona discharge ionization were used for ion mobility measurements of these compounds. Different ions were detected for compounds with different structural features. 63Ni ionization and photoionization provide comparable ions for every set of isomers. The product ions formed can be clearly attributed to the structures identified. However, differences in relative abundance of product ions were found. Although corona discharge ionization permits the most sensitive detection of non-polar hydrocarbons, the spectra detected are complex and differ from those obtained with 63Ni ionization and photoionization. c. 2002 American Society for Mass Spectrometry.

  16. Atmospheric pressure chemical ionization studies of non-polar isomeric hydrocarbons using ion mobility spectrometry and mass spectrometry with different ionization techniques

    NASA Technical Reports Server (NTRS)

    Borsdorf, H.; Nazarov, E. G.; Eiceman, G. A.

    2002-01-01

    The ionization pathways were determined for sets of isomeric non-polar hydrocarbons (structural isomers, cis/trans isomers) using ion mobility spectrometry and mass spectrometry with different techniques of atmospheric pressure chemical ionization to assess the influence of structural features on ion formation. Depending on the structural features, different ions were observed using mass spectrometry. Unsaturated hydrocarbons formed mostly [M - 1]+ and [(M - 1)2H]+ ions while mainly [M - 3]+ and [(M - 3)H2O]+ ions were found for saturated cis/trans isomers using photoionization and 63Ni ionization. These ionization methods and corona discharge ionization were used for ion mobility measurements of these compounds. Different ions were detected for compounds with different structural features. 63Ni ionization and photoionization provide comparable ions for every set of isomers. The product ions formed can be clearly attributed to the structures identified. However, differences in relative abundance of product ions were found. Although corona discharge ionization permits the most sensitive detection of non-polar hydrocarbons, the spectra detected are complex and differ from those obtained with 63Ni ionization and photoionization. c. 2002 American Society for Mass Spectrometry.

  17. Ionizing radiation

    USDA-ARS?s Scientific Manuscript database

    This chapter gives a comprehensive review on ionizing irradiation of fresh fruits and vegetables. Topics include principles of ionizing radiation, its effects on pathogenic and spoilage microorganisms, shelf-life, sensory quality, nutritional and phytochemical composition, as well as physiologic and...

  18. Exploitation of a Multienzymatic Stereoselective Cascade Process in the Synthesis of 2-Methyl-3-Substituted Tetrahydrofuran Precursors.

    PubMed

    Brenna, Elisabetta; Crotti, Michele; Gatti, Francesco G; Marinoni, Ludovico; Monti, Daniela; Quaiato, Sara

    2017-02-17

    Enantiopure 2-methyl-3-substituted tetrahydrofurans are key precursors of several biologically active products (drugs, flavors, and agrochemicals). Thus, a stereocontrolled and efficient methodology for the obtainment of these synthons is highly desirable. We exploited a two-step multienzymatic stereoselective cascade reduction of α-bromo-α,β-unsaturated ketones to give the corresponding bromohydrins in good yields, with high ee and de values. The cascade process is catalyzed by an ene-reductase and an alcohol dehydrogenase. Further manipulations of these bromohydrins, by two diastereodivergent routes, allowed the preparation of the tetrahydrofuran synthons. One route is based on a lipase catalyzed cleavage of the protecting group. The second route is characterized by a camphor sulfonic acid mediated isomerization of a β-hydroxyepoxide to give the tetrahydrofuran-2-ol. Finally, the synthesis of the most odorous and pleasant stereoisomer of the roasted meat aroma, i.e., (2S,3R)-2-methyl-3-thioacetate tetrahydrofuran, is reported as well.

  19. Strategies to control alkoxy radical-initiated relay cyclizations for the synthesis of oxygenated tetrahydrofuran motifs.

    PubMed

    Zhu, Hai; Leung, Joe C T; Sammis, Glenn M

    2015-01-16

    Radical relay cyclizations initiated by alkoxy radicals are a powerful tool for the rapid construction of substituted tetrahydrofurans. The scope of these relay cyclizations has been dramatically increased with the development of two strategies that utilize an oxygen atom in the substrate to accelerate the desired hydrogen atom transfer (HAT) over competing pathways. This has enabled a chemoselective 1,6-HAT over a competing 1,5-HAT. Furthermore, this allows for a chemoselective 1,5-HAT over competing direct cyclizations and β-fragmentations. Oxygen atom incorporation leads to a general increase in cyclization diastereoselectivity over carbon analogues. This chemoselective relay cyclization strategy was utilized in the improved synthesis of the tetrahydrofuran fragment in (−)-amphidinolide K.

  20. A Study of the Complexation of Mercury(II) with Dicysteinyl Tetrapeptides by Electrospray Ionization Mass Spectrometry.

    PubMed

    Mazlo, Johanna; Ngu-Schwemlein, Maria

    2016-01-08

    In this study we evaluated a method for the characterization of complexes, formed in different relative ratios of mercury(II) to dicysteinyl tetrapeptide, by electrospray ionization orbitrap mass spectrometry. This strategy is based on previous successful characterization of mercury-dicysteinyl complexes involving tripeptides by utilizing mass spectrometry among other techniques. Mercury(II) chloride and a dicysteinyl tetrapeptide were incubated in a degassed buffered medium at varying stoichiometric ratios. The complexes formed were subsequently analyzed on an electrospray mass spectrometer consisting of a hybrid linear ion- and orbi- trap mass analyzer. The electrospray ionization mass spectrometry (ESI-MS) spectra were acquired in the positive mode and the observed peaks were then analyzed for distinct mercury isotopic distribution patterns and associated monoisotopic peak. This work demonstrates that an accurate stoichiometry of mercury and peptide in the complexes formed under specified electrospray ionization conditions can be determined by using high resolution ESI MS based on distinct mercury isotopic distribution patterns.

  1. Environmental analysis of the life cycle emissions of 2-methyl tetrahydrofuran solvent manufactured from renewable resources.

    PubMed

    Slater, C Stewart; Savelski, Mariano J; Hitchcock, David; Cavanagh, Eduardo J

    2016-01-01

    An environmental analysis has been conducted to determine the cradle to gate life cycle emissions to manufacture the green solvent, 2-methyl tetrahydrofuran. The solvent is considered a greener chemical since it can be manufactured from renewable resources with a lower life cycle footprint. Analyses have been performed using different methods to show greenness in both its production and industrial use. This solvent can potentially be substituted for other ether and chlorinated solvents commonly used in organometallic and biphasic reactions steps in pharmaceutical and fine chemical syntheses. The 2-methyl tetrahydrofuran made from renewable agricultural by-products is marketed by Penn A Kem under the name ecoMeTHF™. The starting material, 2-furfuraldehyde (furfural), is produced from corn cob waste by converting the available pentosans by acid hydrolysis. An evaluation of each step in the process was necessary to determine the overall life cycle and specific CO2 emissions for each raw material/intermediate produced. Allocation of credits for CO2 from the incineration of solvents made from renewable feedstocks significantly reduced the overall carbon footprint. Using this approach, the overall life cycle emissions for production of 1 kg of ecoMeTHF™ were determined to be 0.191 kg, including 0.150 kg of CO2. Life cycle emissions generated from raw material manufacture represents the majority of the overall environmental impact. Our evaluation shows that using 2-methyl tetrahydrofuran in an industrial scenario results in a 97% reduction in emissions, when compared to typically used solvents such as tetrahydrofuran, made through a conventional chemical route.

  2. Stereodivergent organocatalytic intramolecular Michael addition/lactonization for the asymmetric synthesis of substituted dihydrobenzofurans and tetrahydrofurans.

    PubMed

    Belmessieri, Dorine; de la Houpliere, Alix; Calder, Ewen D D; Taylor, James E; Smith, Andrew D

    2014-07-28

    A stereodivergent asymmetric Lewis base catalyzed Michael addition/lactonization of enone acids into substituted dihydrobenzofuran and tetrahydrofuran derivatives is reported. Commercially available (S)-(-)-tetramisole hydrochloride gives products with high syn diastereoselectivity in excellent enantioselectivity (up to 99:1 d.r.syn/anti , 99 % eesyn ), whereas using a cinchona alkaloid derived catalyst gives the corresponding anti-diastereoisomers as the major product (up to 10:90 d.r.syn/anti , 99 % eeanti ).

  3. Reductive cyclizations of hydroxysulfinyl ketones: enantioselective access to tetrahydropyran and tetrahydrofuran derivatives.

    PubMed

    Carreño, M Carmen; Des Mazery, Renaud; Urbano, Antonio; Colobert, Françoise; Solladié, Guy

    2003-10-03

    The stereocontrolled formation of cis-2,5-disubstituted tetrahydrofurans and cis-2,6-disubstituted tetrahydropyrans is achieved from enantiopure ketosulfinyl esters by reduction, Weinreb's amide, and ketone formation, followed by the reductive cyclization (Et3SiH/TMSOTf) of the resulting hydroxysulfinyl ketones. The sulfoxide-bearing heterocycles were transformed into two natural products, (-)-centrolobine (1) and both enantiomers of cis-(6-methyltetrahydropyran-2-yl)acetic acid (2).

  4. Ab initio study of thiol aqueous phase ionization energies. Methyl mercaptan and cysteamine

    SciTech Connect

    Colson, A.O.; Sevilla, M.D. )

    1994-10-13

    The ionization energies of two thiol model compounds (methyl mercaptan and cysteamine) are calculated at the ROHF/6-31G* level to aid our understanding of the mechanisms involved in DNA radioprotection. Methyl mercaptan, the thiolate anion, and its trihydrated form are fully geometry optimized. The resulting gas-phase Koopmans ionization energies are 9.68, 1.67, and 3.63 eV, respectively. The ionization energy for the solvated methylthiolate anion, CH[sub 3]S[sup [minus

  5. The cage fragmentation of doubly ionized norbornane: A Born-Oppenheimer molecular dynamics study

    NASA Astrophysics Data System (ADS)

    Knippenberg, S.; Hajgató, B.

    2013-10-01

    Results are reported of Born-Oppenheimer molecular dynamics calculations performed on the singlet dication of norbornane, starting from the neutral ground state geometry. Intramolecular rearrangements and charge dissociation processes, which probably take place in the innermost valence ionization spectrum, are discussed and an analysis by means of natural bond orders and Wiberg bond indices has been performed. The outcome of these simulations and the observed cage fragmentation might explain a tremendous rise of electron-impact (e, 2e) ionization cross sections of norbornane at electron binding energies around the double-ionization threshold.

  6. Comments on ionization cooling channels

    DOE PAGES

    Neuffer, David

    2017-09-25

    Ionization cooling channels with a wide variety of characteristics and cooling properties are being developed. These channels can produce cooling performances that are largely consistent with the linear ionization cooling theory developed previously. In this study, we review ionization cooling theory, discuss its application to presently developing cooling channels, and discuss criteria for optimizing cooling.

  7. Study on the Properties of Ionized Metal Plasma Methodology on Titanium

    SciTech Connect

    Leow, M. T.; Hassan, Z.; Lee, K. E.; Omar, G.; Lim, S. P.; Chan, C. F.; Siew, E. T.; Chuah, Z. M.

    2010-07-07

    Ionized Metal Plasma (IMP) deposition was used in depositing metal interconnection of titanium metal film. Inductively coupled plasma (ICP) was attached to chamber wall where it creates an electromagnetic field, thus, ionizing the sputtered metal atoms from target. The film morphology was observed by scanning electron microscope (SEM). Acoustic measurement of titanium film thickness showed that there was a comparable result with film resistance measured by 4-point probe. Results show that higher plasma density would cause tensile properties on the film stress.

  8. Ionizing radiation-induced mutagenesis: radiation studies in Neurospora predictive for results in mammalian cells

    NASA Technical Reports Server (NTRS)

    Evans, H. H.; DeMarini, D. M.

    1999-01-01

    Ionizing radiation was the first mutagen discovered and was used to develop the first mutagenicity assay. In the ensuing 70+ years, ionizing radiation became a fundamental tool in understanding mutagenesis and is still a subject of intensive research. Frederick de Serres et al. developed and used the Neurospora crassa ad-3 system initially to explore the mutagenic effects of ionizing radiation. Using this system, de Serres et al. demonstrated the dependence of the frequency and spectra of mutations induced by ionizing radiation on the dose, dose rate, radiation quality, repair capabilities of the cells, and the target gene employed. This work in Neurospora predicted the subsequent observations of the mutagenic effects of ionizing radiation in mammalian cells. Modeled originally on the mouse specific-locus system developed by William L. Russell, the N. crassa ad-3 system developed by de Serres has itself served as a model for interpreting the results in subsequent systems in mammalian cells. This review describes the primary findings on the nature of ionizing radiation-induced mutagenesis in the N. crassa ad-3 system and the parallel observations made years later in mammalian cells.

  9. Ionizing radiation-induced mutagenesis: radiation studies in Neurospora predictive for results in mammalian cells

    NASA Technical Reports Server (NTRS)

    Evans, H. H.; DeMarini, D. M.

    1999-01-01

    Ionizing radiation was the first mutagen discovered and was used to develop the first mutagenicity assay. In the ensuing 70+ years, ionizing radiation became a fundamental tool in understanding mutagenesis and is still a subject of intensive research. Frederick de Serres et al. developed and used the Neurospora crassa ad-3 system initially to explore the mutagenic effects of ionizing radiation. Using this system, de Serres et al. demonstrated the dependence of the frequency and spectra of mutations induced by ionizing radiation on the dose, dose rate, radiation quality, repair capabilities of the cells, and the target gene employed. This work in Neurospora predicted the subsequent observations of the mutagenic effects of ionizing radiation in mammalian cells. Modeled originally on the mouse specific-locus system developed by William L. Russell, the N. crassa ad-3 system developed by de Serres has itself served as a model for interpreting the results in subsequent systems in mammalian cells. This review describes the primary findings on the nature of ionizing radiation-induced mutagenesis in the N. crassa ad-3 system and the parallel observations made years later in mammalian cells.

  10. Background Ionizing Radiation and the Risk of Childhood Cancer: A Census-Based Nationwide Cohort Study

    PubMed Central

    Lupatsch, Judith E.; Zwahlen, Marcel; Röösli, Martin; Niggli, Felix; Grotzer, Michael A.; Rischewski, Johannes; Egger, Matthias; Kuehni, Claudia E.

    2015-01-01

    Background Exposure to medium or high doses of ionizing radiation is a known risk factor for cancer in children. The extent to which low-dose radiation from natural sources contributes to the risk of childhood cancer remains unclear. Objectives In a nationwide census-based cohort study, we investigated whether the incidence of childhood cancer was associated with background radiation from terrestrial gamma and cosmic rays. Methods Children < 16 years of age in the Swiss National Censuses in 1990 and 2000 were included. The follow-up period lasted until 2008, and incident cancer cases were identified from the Swiss Childhood Cancer Registry. A radiation model was used to predict dose rates from terrestrial and cosmic radiation at locations of residence. Cox regression models were used to assess associations between cancer risk and dose rates and cumulative dose since birth. Results Among 2,093,660 children included at census, 1,782 incident cases of cancer were identified including 530 with leukemia, 328 with lymphoma, and 423 with a tumor of the central nervous system (CNS). Hazard ratios for each millisievert increase in cumulative dose of external radiation were 1.03 (95% CI: 1.01, 1.05) for any cancer, 1.04 (95% CI: 1.00, 1.08) for leukemia, 1.01 (95% CI: 0.96, 1.05) for lymphoma, and 1.04 (95% CI: 1.00, 1.08) for CNS tumors. Adjustment for a range of potential confounders had little effect on the results. Conclusions Our study suggests that background radiation may contribute to the risk of cancer in children, including leukemia and CNS tumors. Citation Spycher BD, Lupatsch JE, Zwahlen M, Röösli M, Niggli F, Grotzer MA, Rischewski J, Egger M, Kuehni CE, for the Swiss Pediatric Oncology Group and the Swiss National Cohort. 2015. Background ionizing radiation and the risk of childhood cancer: a census-based nationwide cohort study. Environ Health Perspect 123:622–628; http://dx.doi.org/10.1289/ehp.1408548 PMID:25707026

  11. High-resolution pulsed-field ionization photoelectron study of O{sub 2}

    SciTech Connect

    Hsu, C.W.; Evans, M.; Stimson, S.

    1997-04-01

    There have been numerous photoionization studies of O{sub 2} over the past 10 years. Using the pulsed field ionization (PFI) photoelectron spectroscopy (PES) technique, the electronic ground state of O{sub 2}{sup +} (X{sup 2}{Pi}{sub g}{sup {minus}}) has been well studied on the rotationally resolved level by several groups. However, due to the difficulty of producing photon energies above 18 eV using the tunable lasers, the electronic excited states of O{sub 2}{sup +} have been mostly studied on the vibrationally resolved level using the threshold photoelectron spectroscopy (TPES) and the synchrotron radiation. Recently, the authors developed a new technique for performing the PFI-PE experiments using multi-bunch synchrotron radiation at the Chemical Dynamics Beamline of the Advanced Light Source (ALS). Using the high resolution VUV light from the ALS, they have obtained the PFI-PE spectra of O{sub 2} between 12 and 24 eV. In this abstract, the authors report for the first time the rotationally resolved spectra of O{sub 2}{sup +} (b{sup 4}{Sigma}{sub g}{sup {minus}}, v{sup +}=0).

  12. Fragmentation study of aminoalcohol-diterpenoid alkaloids by electrospray ionization time-of-flight mass spectrometry.

    PubMed

    Liu, Xiuxiu; Tang, Minghai; Wang, Lu; Chao, Ruobing

    2016-01-15

    Aminoalcohol-diterpenoid alkaloids were found to be a group of cardioactive substances in the lateral roots of Aconitum carmichaeli Debx. Studies on the fragmentation behaviors and features of these alkaloids in mass spectrometry would be important for their structural identification and in vivo metabolic research, which has not received much attention thus far. In this study, the fragmentation behaviors of 14 aminoalcohol-diterpenoid alkaloids were investigated by utilizing high-resolution time-of-flight tandem mass spectrometry. By analysis of the obtained MS(2) data, we summarized the fragmentation features of the corresponding alkaloids under different collision energy. The dissociation of functional groups from the skeleton was observed as the main fragmentation way in electrospray ionization (ESI) mode. The order of fragmentation sites was C1/C3 > C16 > C15 > C6 > N, with loss of one or more CH3OH, H2O, C2H4 (substituent on N atom) or CO (at C15 ) groups. The first systematic investigations on the fragmentation of aminoalcohol-diterpenoid alkaloids are described in this paper, setting the stage for an in-depth identification and study of the corresponding components in complex systems. Copyright © 2015 John Wiley & Sons, Ltd.

  13. Coupled Cluster Studies of Ionization Potentials and Electron Affinities of Single-Walled Carbon Nanotubes.

    PubMed

    Peng, Bo; Govind, Niranjan; Aprà, Edoardo; Klemm, Michael; Hammond, Jeff R; Kowalski, Karol

    2017-02-16

    In this paper, we apply equation-of-motion coupled cluster (EOM-CC) methods in the studies of the vertical ionization potentials (IPs) and electron affinities (EAs) for a series of single-walled carbon nanotubes (SWCNT). The EOM-CC formulations for IPs and EAs employing excitation manifolds spanned by single and double excitations (IP/EA-EOM-CCSD) are used to study the IPs and EAs of the SWCNTs as a function of the nanotube length. Several armchair nanotubes corresponding to C20nH20 models with n = 2-6 have been used in benchmark calculations. In agreement with previous studies, we demonstrate that the electronegativity of C20nH20 systems remains, to a large extent, independent of the nanotube length. We also compare IP/EA-EOM-CCSD results with those obtained with coupled cluster models with single and double excitations corrected by perturbative triples, CCSD(T), and density functional theory (DFT) using global and range-separated hybrid exchange-correlation functionals.

  14. Study of spatial distributions of highly ionized nonequilibrium helium plasma at atmospheric pressures

    NASA Astrophysics Data System (ADS)

    Chinnov, V. F.; Kavyrshin, D. I.; Ageev, A. G.; Korshunov, O. V.; Sargsyan, M. A.; Efimov, A. V.

    2016-11-01

    Experimental study of helium plasma in the state of quasistationary heating under atmospheric pressure was made. The plasma state is shown to fail to be described by Saha- Boltzmann approximation at high ionization levels α i = 0.5-0.9, temperatures 2.5-4.0 eV and electron concentrations about 1017 cm-3. The deviation from the equilibrium state of the plasma is caused by lack of spatial uniformity due to charged particles loss by ambipolar diffusion. In order to thoroughly study the temporal changes of plasma radiation characteristics, spectroscopic analysis was carried out with DFS-452 spectrometer and high-speed CMOS camera Andor iStar attached to its output. The system yields the spatial resolution of 30-50 μm and temporal resolution of 5-50 μs. Electron concentration ne was measured from the half-width of the local Hei spectrum line contours having dominant quadruple Stark effect with well-known constants. In order to determine the temperature of heavy particles, Doppler component of HeI line triplet at 1083 nm was studied. The temporal evolution of the following important characteristics has been determined for helium plasma during pulsed heating: current power, intensities of a number of HeI and HeII spectral lines, electron temperatures and concentrations.

  15. Ionized physical vapor deposition of Cu on 300 mm wafers: A modeling study

    NASA Astrophysics Data System (ADS)

    Rauf, Shahid; Ventzek, Peter L. G.; Arunachalam, Valli

    2001-03-01

    A two-dimensional model has been used to understand the physics and process engineering issues associated with a conceptual 300 mm Cu internal-coil ionized physical vapor deposition reactor. It has been found that inductive coupling from the coil is the primary source of plasma production. Since the coil is in direct contact with the plasma, a significant fraction of the coil power is deposited in the gas capacitively as well. This results in sputtering of the Cu coil, which tends to improve Cu flux uniformity at the outer edges of the wafer. Since the Cu ionization threshold is much lower than Ar, Cu+ density is comparable to Ar+ density even though ground state Cu density is much smaller than Ar. Significant fraction of the neutral Cu flux to the wafer is in the metastable or athermal state. The effects of several actuators, reactor dimensions, and buffer gas on important plasma and process quantities have also been investigated. Electron density in the reactor and Cu ionization fraction increases with increasing total coil power because of enhanced ionization. Total coil power however does not affect the Cu density appreciably, except near the coil where enhanced coil sputtering increases the Cu density. Decrease in dc target voltage with increasing coil power decreases Cu+ loss to the target and results in an increase in total Cu flux to the wafer. Electron and Cu density in the reactor increase with increasing dc target power. This is due to enhancement in target sputtering and consequent ionization of the sputtered Cu. While this increases the total Cu flux to the wafer, ionization fraction is not affected much. It is demonstrated that uniformity of Cu flux to the wafer and ionization fraction can be controlled by means of the terminating capacitor at the coil. Decreasing the terminating capacitance increases the coil voltage, enhances coil sputtering and enhances Cu flux toward the outer edges of the wafer. This, however, decreases the amount of power that

  16. Deciphering the bipolar planetary nebula Abell 14 with 3D ionization and morphological studies

    NASA Astrophysics Data System (ADS)

    Akras, S.; Clyne, N.; Boumis, P.; Monteiro, H.; Gonçalves, D. R.; Redman, M. P.; Williams, S.

    2016-04-01

    Abell 14 is a poorly studied object despite being considered a born-again planetary nebula. We performed a detailed study of its 3D morphology and ionization structure using the SHAPE and MOCASSIN codes. We found that Abell 14 is a highly evolved, bipolar nebula with a kinematical age of ˜19 400 yr for a distance of 4 kpc. The high He abundance, and N/O ratio indicate a progenitor of 5 M⊙ that has experienced the third dredge-up and hot bottom burning phases. The stellar parameters of the central source reveal a star at a highly evolved stage near to the white dwarf cooling track, being inconsistent with the born-again scenario. The nebula shows unexpectedly strong [N I] λ5200 and [O I] λ6300 emission lines indicating possible shock interactions. Abell 14 appears to be a member of a small group of highly evolved, extreme type-I planetary nebulae (PNe). The members of this group lie at the lower-left corner of the PNe regime on the [N II]/Hα versus [S II]/Hα diagnostic diagram, where shock-excited regions/objects are also placed. The low luminosity of their central stars, in conjunction with the large physical size of the nebulae, result in a very low photoionization rate, which can make any contribution of shock interaction easily perceptible, even for small velocities.

  17. Epidemiologic studies of ionizing radiation and cancer: past successes and future challenges.

    PubMed Central

    Samet, J M

    1997-01-01

    The health effects of radiation have been a focus for research since early in the 20th century. As the century ends, extensive experimental and epidemiologic evidence has been accumulated that addresses the adverse consequences of radiation exposure; epidemiologic studies of radiation-exposed groups from the general population and specific occupational groups provide quantitative estimates of the cancer risks associated with exposure. This report provides a perspective on the extensive epidemiologic evidence on the health effects of ionizing radiation and on likely needs for further epidemiologic research on radiation and health. Epidemiologic studies have proved informative on the quantitative risks of radiation-caused cancer but we now face the challenges of more precisely characterizing risks at lower levels of exposure and also of assessing modifiers of the risks, including dose rate, genetic susceptibility, and other environmental exposures. This report considers investigative approaches, such as pooled analysis of multiple data sets, that can be used to address these complex questions and the limitations of these approaches for addressing societal concerns about the risks of radiation exposure. PMID:9255575

  18. New Modeling Approaches to Study DNA Damage by the Direct and Indirect Effects of Ionizing Radiation

    NASA Technical Reports Server (NTRS)

    Plante, Ianik; Cucinotta, Francis A.

    2012-01-01

    DNA is damaged both by the direct and indirect effects of radiation. In the direct effect, the DNA itself is ionized, whereas the indirect effect involves the radiolysis of the water molecules surrounding the DNA and the subsequent reaction of the DNA with radical products. While this problem has been studied for many years, many unknowns still exist. To study this problem, we have developed the computer code RITRACKS [1], which simulates the radiation track structure for heavy ions and electrons, calculating all energy deposition events and the coordinates of all species produced by the water radiolysis. In this work, we plan to simulate DNA damage by using the crystal structure of a nucleosome and calculations performed by RITRACKS. The energy deposition events are used to calculate the dose deposited in nanovolumes [2] and therefore can be used to simulate the direct effect of the radiation. Using the positions of the radiolytic species with a radiation chemistry code [3] it will be possible to simulate DNA damage by indirect effect. The simulation results can be compared with results from previous calculations such as the frequencies of simple and complex strand breaks [4] and with newer experimental data using surrogate markers of DNA double ]strand breaks such as . ]H2AX foci [5].

  19. The study of radiation induced DNA-protein crosslinks by electrospray ionization mass spectrometry

    SciTech Connect

    Lipton, M.S.; Fuciarelli, A.F.; Springer, D.L.; Edmonds, C.G.

    1995-12-31

    The authors have used peptide-thymine and histone-thymine solutions to model protein-DNA cross-linking chemistry induced in intact chromatin by low dosage of g-irradiation. Induced thymine crosslinking to model peptide systems has been evaluated by on-line liquid chromatography-electrospray ionization mass spectrometry (ESI-MS) and tandem mass spectrometry (MS-MS) with sensitivity comparable or superior to conventional GC-MS determinations. Radiation damage at doses as low as 0.1 Gy can be detected by this method. Additionally, thymine modified H2B can also be examined by ESI-MS and tandem-MS of the intact protein and proteinase digests. Limited information on the sites of thymine crosslinking can be obtained by tandem mass spectrometry on the intact multiply charged molecular species. More detailed information on the sites of thymine-protein crosslinking is obtained by on-line LC-ESI-MS of selective proteolysis products of the modified histones. Further MS-MS experiments on the selective proteolysis products will reveal specific modified amino acids and their sequence location. These methods reveal the nature, extent and site of radiation induced modification of the oligopeptides. Studies are being extended to the examination of the radiation induced covalent interactions between histones and oligonucleotides in higher states of organization. The eventual object is to study DNA-protein crosslinking interactions in model and native genomic nucleosome systems.

  20. Amifostine, a radioprotectant agent, protects rat brain tissue lipids against ionizing radiation induced damage: An FTIR microspectroscopic imaging study

    SciTech Connect

    Cakmak G.; Miller L.; Zorlu, F.; Severcan, F.

    2012-03-03

    Amifostine is the only approved radioprotective agent by FDA for reducing the damaging effects of radiation on healthy tissues. In this study, the protective effect of amifostine against the damaging effects of ionizing radiation on the white matter (WM) and grey matter (GM) regions of the rat brain were investigated at molecular level. Sprague-Dawley rats, which were administered amifostine or not, were whole-body irradiated at a single dose of 800 cGy, decapitated after 24 h and the brain tissues of these rats were analyzed using Fourier transform infrared microspectroscopy (FTIRM). The results revealed that the total lipid content and CH{sub 2} groups of lipids decreased significantly and the carbonyl esters, olefinic=CH and CH{sub 3} groups of lipids increased significantly in the WM and GM after exposure to ionizing radiation, which could be interpreted as a result of lipid peroxidation. These changes were more prominent in the WM of the brain. The administration of amifostine before ionizing radiation inhibited the radiation-induced lipid peroxidation in the brain. In addition, this study indicated that FTIRM provides a novel approach for monitoring ionizing radiation induced-lipid peroxidation and obtaining different molecular ratio images can be used as biomarkers to detect lipid peroxidation in biological systems.

  1. A MULTIWAVELENGTH STUDY ON THE FATE OF IONIZING RADIATION IN LOCAL STARBURSTS

    SciTech Connect

    Hanish, D. J.; Oey, M. S.; Rigby, J. R.; Lee, J. C.; De Mello, D. F.

    2010-12-20

    The fate of ionizing radiation is vital for understanding cosmic ionization, energy budgets in the interstellar and intergalactic medium, and star formation rate indicators. The low observed escape fractions of ionizing radiation have not been adequately explained, and there is evidence that some starbursts have high escape fractions. We examine the spectral energy distributions (SEDs) of a sample of local star-forming galaxies, containing 13 local starburst galaxies and 10 of their ordinary star-forming counterparts, to determine if there exist significant differences in the fate of ionizing radiation in these galaxies. We find that the galaxy-to-galaxy variations in the SEDs are much larger than any systematic differences between starbursts and non-starbursts. For example, we find no significant differences in the total absorption of ionizing radiation by dust, traced by the 24 {mu}m, 70 {mu}m, and 160 {mu}m MIPS bands of the Spitzer Space Telescope, although the dust in starburst galaxies appears to be hotter than that of non-starburst galaxies. We also observe no excess ultraviolet flux in the Galaxy Evolution Explorer bands that could indicate a high escape fraction of ionizing photons in starburst galaxies. The small H{alpha} fractions of the diffuse, warm ionized medium (WIM) in starburst galaxies are apparently due to temporarily boosted H{alpha} luminosity within the star-forming regions themselves, with an independent, constant WIM luminosity. This independence of the WIM and starburst luminosities contrasts with WIM behavior in non-starburst galaxies and underscores our poor understanding of radiation transfer in both ordinary and starburst galaxies.

  2. Combined vacuum ultraviolet laser and synchrotron pulsed field ionization study of CH2BrCl.

    PubMed

    Li, Juan; Yang, Jie; Mo, Yuxiang; Lau, K C; Qian, X M; Song, Y; Liu, Jianbo; Ng, C Y

    2007-05-14

    The pulsed field ionization-photoelectron (PFI-PE) spectrum of bromochloromethane (CH2BrCl) in the region of 85,320-88,200 cm-1 has been measured using vacuum ultraviolet laser. The vibrational structure resolved in the PFI-PE spectrum was assigned based on ab initio quantum chemical calculations and Franck-Condon factor predictions. At energies 0-1400 cm-1 above the adiabatic ionization energy (IE) of CH2BrCl, the Br-C-Cl bending vibration progression (nu1+=0-8) of CH2BrCl+ is well resolved and constitutes the major structure in the PFI-PE spectrum, whereas the spectrum at energies 1400-2600 cm-1 above the IE(CH2BrCl) is found to exhibit complex vibrational features, suggesting perturbation by the low lying excited CH2BrCl+(A 2A") state. The assignment of the PFI-PE vibrational bands gives the IE(CH2BrCl)=85,612.4+/-2.0 cm-1 (10.6146+/-0.0003 eV) and the bending frequencies nu1+(a1')=209.7+/-2.0 cm-1 for CH2BrCl+(X2A'). We have also examined the dissociative photoionization process, CH2BrCl+hnu-->CH2Cl++Br+e-, in the energy range of 11.36-11.57 eV using the synchrotron based PFI-PE-photoion coincidence method, yielding the 0 K threshold or appearance energy AE(CH2Cl+)=11.509+/-0.002 eV. Combining the 0 K AE(CH2Cl+) and IE(CH2BrCl) values obtained in this study, together with the known IE(CH2Cl), we have determined the 0 K bond dissociation energies (D0) for CH2Cl+-Br (0.894+/-0.002 eV) and CH2Cl-Br (2.76+/-0.01 eV). We have also performed CCSD(T, full)/complete basis set (CBS) calculations with high-level corrections for the predictions of the IE(CH2BrCl), AE(CH2Cl+), IE(CH2Cl), D0(CH2Cl+-Br), and D0(CH2Cl-Br). The comparison between the theoretical predictions and experimental determinations indicates that the CCSD(T, full)/CBS calculations with high-level corrections are highly reliable with estimated error limits of <17 meV.

  3. Hypercalcitoninemia and hypocalcemia in acutely ill children: studies in serum calcium, blood ionized calcium, and calcium-regulating hormones.

    PubMed

    Sanchez, G J; Venkataraman, P S; Pryor, R W; Parker, M K; Fry, H D; Blick, K E

    1989-06-01

    We studied the hypotheses that serum calcium and blood ionized calcium would be low in acutely ill children and would rise with clinical improvement. In 15 children admitted to the pediatric intensive care unit, the blood ionized calcium level was 4.45 +/- 0.06 mg/dl (1.11 +/- 0.015 mmol/L) on entry versus 5.17 +/- 0.03 mg/dl (1.29 +/- 0.01 mmol/L) in control subjects (p less than 0.005), rose significantly on days 2 and 3, and was 5.12 +/- 0.04 mg/dl (1.28 +/- 0.01 mmol/L) at discharge (p less than 0.005). Changes in serum calcium level were similar, whereas serum magnesium and phosphorus levels were normal and did not change. Basal serum parathyroid hormone concentrations were elevated, rose further during the study, and were normal at discharge. Serum parathyroid hormone levels correlated inversely with blood ionized calcium levels, indicating that compensatory hyperparathyroidism occurs with low blood ionized calcium concentrations. Basal serum calcitonin values were evaluated on entry and decreased with clinical improvement. Serum calcitonin levels correlated significantly with low blood ionized calcium levels, indicating that hypercalcitoninemia may play a role in the pathogenesis of hypocalcemia in these children. Urine calcium excretion was not increased in the four children studied. We speculate that with clinical improvement, a rise in serum parathyroid hormone levels and a decline in serum calcitonin levels may help restore normocalcemia in these acutely ill children.

  4. Optimization of the ionization time of an atom with tailored laser pulses: a theoretical study

    NASA Astrophysics Data System (ADS)

    Kammerlander, David; Castro, Alberto; Marques, Miguel A. L.

    2017-05-01

    How fast can a laser pulse ionize an atom? We address this question by considering pulses that carry a fixed time-integrated energy per-area, and finding those that achieve the double requirement of maximizing the ionization that they induce, while having the shortest duration. We formulate this double-objective quantum optimal control problem by making use of the Pareto approach to multi-objective optimization, and the differential evolution genetic algorithm. The goal is to find out how a precise time-profiling of ultra-fast, large-bandwidth pulses may speed up the ionization process. We work on a simple one-dimensional model of hydrogen-like atoms (the Pöschl-Teller potential) that allows to tune the number of bound states that play a role in the ionization dynamics. We show how the detailed shape of the pulse accelerates the ionization, and how the presence or absence of bound states influences the velocity of the process.

  5. Serum Ionized Calcium Quantification for Staging Canine Periodontal Disease: A Preliminary Study.

    PubMed

    Miguel Carreira, L; Daniela, Dias; Pedro, Azevedo

    2015-06-01

    Periodontal diseases (PD) are infectious, inflammatory, progressive diseases of the oral cavity affecting people and dogs. PD takes 2 forms: gingivitis and periodontitis. Diagnosing or staging PD can be achieved only with dental x-rays and periodontal probing, both of which require the use of general anesthesia in dogs. This study aimed to determine whether serum ionized calcium ([iCa(2+)]) levels can be useful in preliminary PD staging in dogs. A sample of 40 dogs (n = 40) was divided into 4 groups (n = 10 each) based on the following PD stages: G1 (gingivitis), G2 (initial periodontitis), G3 (moderate periodontitis), and G4 (severe periodontitis). The groups were then subjected to [iCa(2+)] quantification. Statistically significant differences were observed between PD stages and [iCa(2+)] for all stages except G3 and G4. Therefore, this parameter can be used as an additional tool to establish and monitor preliminary PD status. Copyright © 2015 Elsevier Inc. All rights reserved.

  6. Review of certain low-level ionizing radiation studies in mice and guinea pigs

    SciTech Connect

    Congdon, C.C.

    1987-05-01

    Starting in the early 1940s, Egon Lorenz and collaborators at the National Cancer Institute began an extended study of chronic low-level ionizing radiation effects in what was then the tolerance range for man. Observations on life span, body weight and radiation carcinogenesis, among others, were made in mice, guinea pigs and rabbits. At the then-permissible exposure level, 0.1 R** per 8-h day until natural death, experimental mice and guinea pigs had a slightly greater mean life span compared to control animals. In addition, there was marked weight gain during the growth phase in both species. Increased tumor incidence was also observed at the 0.1-R level in mice. The primary hypothesis for increased median life span has been rebound regenerative hyperplasia during the early part of the exposure; in the presence of continuing injury, there is physiological enhancement of defense mechanisms against intercurrent infection. The body weight gain has not been explained. 32 references.

  7. Theoretical study of energy deposition in ionization chambers for tritium measurements

    SciTech Connect

    Chen, Zhilin; Peng, Shuming; Meng, Dan; He, Yuehong; Wang, Heyi

    2013-10-15

    Energy deposition in ionization chambers has been theoretically studied for tritium measurements in gaseous form. A one-dimension model is introduced to establish the quantitative relationship between energy deposition rate and many factors, including carrier gas, gas pressure, wall material, chamber size, and gas temperature. Energy deposition rate has been calculated at pressure varying from 5 kPa to 500 kPa based on some approximations. It is found that energy deposition rate varies greatly for different parameters, especially at low gas pressure. For the same chamber, energy deposition rate in argon is much higher than in deuterium, as much as 70.7% higher at 5 kPa. Gold plated chamber gives highest energy deposition rate in the calculations while aluminum chamber results in the lowest. As chamber size gets smaller, β ray emitted by tritium will deposit less energy in the sensitive region of the chamber. For chambers flowing through with the same gas, energy deposition rate in a 10 L chamber is 23.9% higher than in a 0.05 L chamber at 5 kPa. Gas temperature also places slight influence on energy deposition rate, and 373 K will lead to 6.7% lower deposition rate than 233 K at 5 kPa. In addition, experiments have been performed to obtain energy deposition rate in a gold plated chamber, which show good accordance with theoretical calculations.

  8. Theoretical study of energy deposition in ionization chambers for tritium measurements

    NASA Astrophysics Data System (ADS)

    Chen, Zhilin; Peng, Shuming; Meng, Dan; He, Yuehong; Wang, Heyi

    2013-10-01

    Energy deposition in ionization chambers has been theoretically studied for tritium measurements in gaseous form. A one-dimension model is introduced to establish the quantitative relationship between energy deposition rate and many factors, including carrier gas, gas pressure, wall material, chamber size, and gas temperature. Energy deposition rate has been calculated at pressure varying from 5 kPa to 500 kPa based on some approximations. It is found that energy deposition rate varies greatly for different parameters, especially at low gas pressure. For the same chamber, energy deposition rate in argon is much higher than in deuterium, as much as 70.7% higher at 5 kPa. Gold plated chamber gives highest energy deposition rate in the calculations while aluminum chamber results in the lowest. As chamber size gets smaller, β ray emitted by tritium will deposit less energy in the sensitive region of the chamber. For chambers flowing through with the same gas, energy deposition rate in a 10 L chamber is 23.9% higher than in a 0.05 L chamber at 5 kPa. Gas temperature also places slight influence on energy deposition rate, and 373 K will lead to 6.7% lower deposition rate than 233 K at 5 kPa. In addition, experiments have been performed to obtain energy deposition rate in a gold plated chamber, which show good accordance with theoretical calculations.

  9. Numerical studies of the behavior of ionized residual gas in an energy recovering linac

    NASA Astrophysics Data System (ADS)

    Pöplau, Gisela; van Rienen, Ursula; Meseck, Atoosa

    2015-04-01

    Next generation light sources such as energy recovering linacs (ERLs) are highly sensitive to instabilities due to ionized residual gas, which must be mitigated for successful operation. Vacuum pumps are insufficient for removal of the ions, as the ions are trapped by the beam's electrical potential. Two effective measures are (i) introducing clearing gaps in the bunch train, and (ii) installing clearing electrodes which pull out the trapped ions from the electrical potential of the beam. In this paper, we present numerical studies on the behavior of ion clouds that interact with bunch trains in an ERL taking into account the effects of the clearing gaps and clearing electrodes. We present simulations with different compositions of the residual gas. Simulations are done using the MOEVE PIC Tracking software package developed at Rostock University, which has been upgraded to include the behavior of ion clouds in the environment of additional electromagnetic fields, such as generated by clearing electrodes. The simulations use the parameters of the Berlin Energy Recovery Linac Project (bERLinPro) to allow for the deduction of appropriate measures for bERLinPro 's design and operation.

  10. Study of the Ionization Dynamics and Equation of State of a Strongly Coupled Plasma

    SciTech Connect

    Shepherd, R; Audebert, P; Geindre, J P; Iglesias, C; Foord, M; Rogers, F; Gauthier, J C; Springer, P

    2003-02-06

    Preliminary experiments to study the ionization dynamics and equation of state of a strongly coupled plasma have been performed at the LLNL COMET laser facility. In these experiment, a 1.0 J, 500 fs, 532 nm laser was used to create a uniform, warm dense plasma.The primary diagnostic, Fourier Domain Interferometry (FDI), was used to provide information about the position of the critical density of the target and thus the expansion hydrodynamics, laying the ground work for the plasma characterization. The plasmas were determined to be strongly coupled. In addition work was performed characterizing the back-lighter. A von Hamos spectrograph coupled to a 500 fs X-ray streak camera (TREX-VHS) developed at LLNL was used for these measurements. This diagnostic combines high collection efficiency ({approx} 10{sup -4} steradians) with fast temporal response ({approx} 500 fs), allowing resolution of extremely transient spectral variations. The TREX-VHS will be used to determine the time history, intensity, and spectral content of the back-lighter resulting in absorption measurements that provide insight into bound states in strongly coupled conditions.

  11. A new dynamical atmospheric ionizing radiation (AIR) model for epidemiological studies

    NASA Technical Reports Server (NTRS)

    De Angelis, G.; Clem, J. M.; Goldhagen, P. E.; Wilson, J. W.

    2003-01-01

    A new Atmospheric Ionizing Radiation (AIR) model is currently being developed for use in radiation dose evaluation in epidemiological studies targeted to atmospheric flight personnel such as civilian airlines crewmembers. The model will allow computing values for biologically relevant parameters, e.g. dose equivalent and effective dose, for individual flights from 1945. Each flight is described by its actual three dimensional flight profile, i.e. geographic coordinates and altitudes varying with time. Solar modulated primary particles are filtered with a new analytical fully angular dependent geomagnetic cut off rigidity model, as a function of latitude, longitude, arrival direction, altitude and time. The particle transport results have been obtained with a technique based on the three-dimensional Monte Carlo transport code FLUKA, with a special procedure to deal with HZE particles. Particle fluxes are transformed into dose-related quantities and then integrated all along the flight path to obtain the overall flight dose. Preliminary validations of the particle transport technique using data from the AIR Project ER-2 flight campaign of measurements are encouraging. Future efforts will deal with modeling of the effects of the aircraft structure as well as inclusion of solar particle events. Published by Elsevier Ltd on behalf of COSPAR.

  12. A Theoretical Study of the Outer Layers of Eight Kepler F-stars: The Relevance of Ionization Processes

    NASA Astrophysics Data System (ADS)

    Brito, Ana; Lopes, Ilídio

    2017-07-01

    We have analyzed the theoretical model envelopes of eight Kepler F-stars by computing the phase shift of the acoustic waves, α (ω ), and its related function, β (ω ). The latter is shown to be a powerful probe of the external stellar layers since it is particularly sensitive to the partial ionization zones located in these upper layers. We found that these theoretical envelopes can be organized into two groups, each of which is characterized by a distinct β (ω ) shape that we show to reflect the differences related to the magnitudes of ionization processes. Since β (ω ) can also be determined from the experimental frequencies, we compared our theoretical results with the observable β (ω ). Using the function β (ω ), and with the purpose of quantifying the magnitude of the ionization processes occurring in the outer layers of these stars, we define two indexes, {{Δ }}{β }1 and {{Δ }}{β }2. These indexes allow us to connect the microphysics of the interior of the star with macroscopic observable characteristics. Motivated by the distinct magnetic activity behaviors of F-stars, we studied the relation between the star’s rotation period and these indexes. We found a trend, in the form of a power-law dependence, that favors the idea that ionization is acting as an underlying mechanism, which is crucial for understanding the relation between rotation and magnetism and even observational features such as the Kraft break.

  13. Comparative Study of the Dissociative Ionization of 1,1,1-Trichloroethane Using Nanosecond and Femtosecond Laser Pulses

    PubMed Central

    du Plessis, Anton; Strydom, Christien; Botha, Lourens

    2010-01-01

    Changes in the laser induced molecular dissociation of 1,1,1-trichloroethane (TCE) were studied using a range of intensities and standard laser wavelengths with nanosecond and femtosecond pulse durations. TCE contains C-H, C-C and C-Cl bonds and selective bond breakage of one or more of these bonds is of scientific interest. Using laser ionization time of flight mass spectrometry, it was found that considerable variation of fragment ion peak heights as well as changes in relative peak ratios is possible by varying the laser intensity (by attenuation), wavelength and pulse duration using standard laser sources. The nanosecond laser dissociation seems to occur via C-Cl bond breakage, with significant fragmentation and only a few large mass ion peaks observed. In contrast, femtosecond laser dissociative ionization results in many large mass ion peaks. Evidence is found for various competing dissociation and ionization pathways. Variation of the nanosecond laser intensity does not change the fragmentation pattern, while at high femtosecond intensities large changes are observed in relative ion peak sizes. The total ionization yield and fragmentation ratios are presented for a range of wavelengths and intensities, and compared to the changes observed due to a linear chirp variation. PMID:20480004

  14. Study of Hydrophobic and Ionizable Hydrophilic Copolymers at Polymer/Solid and Polymer/Liquid Interfaces

    SciTech Connect

    Perahia, Dvora

    2011-11-01

    Joint experimental-computational efforts were set to characterize the interfacial effects on the structure and dynamics of polymers consisting of highly rigid hydrophilic-ionizable and hydrophobic sub-units within one polymeric chain casted into thin films of several molecular dimensions. Focusing on the ultra thin film region we separate out the interfacial effects from bulk characteristics. Specifically, the study sought to: identify the parameters that control the formation of a stable polymer-solid interface. The study consists of two components, experimental investigations and computational efforts. The experimental component was designed to derive empirical trends that can be used to correlate the set of coupled polymer molecular parameters with the interfacial characteristics of these polymers, and their response to presence of solvents. The computational study was designed to provide molecular insight into the ensemble averages provided by the experimental efforts on multiple length scales from molecular dimensions, to the nanometer lengths to a macroscopic understanding of solvent interactions with structured polymers. With the ultimate goal of correlating molecular parameters to structure, dynamics and properties of ionic polymers, the first stage of the research began with the study of two systems, one which allowed tailoring the flexibility of the backbone without the presence of ionic groups, but with a potential to sulfonate groups at a later stage, and a polymer whose backbone is rigid and the density of the ionic group can be varied. The combined experimental and computational studies significantly extended the understanding of polymers at interfaces from model systems to polydispersed copolymers with blocks of varying nature and complexity. This new insight directly affects the design of polymers for sustainable energy applications from batteries and fuel cells to solar energy.

  15. A Comparative PCET Study of a Donor-Acceptor Pair Linked by Ionized and Non-ionized Asymmetric Hydrogen-Bonded Interfaces

    PubMed Central

    Young, Elizabeth R.; Rosenthal, Joel; Hodgkiss, Justin M.

    2012-01-01

    A Zn(II) porphyrin-amidinium is the excited state electron donor (D) to a naphthalene diimide acceptor (A) appended with either a carboxylate or sulfonate functionality. The two-point hydrogen bond (---[H+]---) formed between the amidinium and carboxylate or sulfonate establishes a proton-coupled electron transfer (PCET) pathway for charge transfer. The two D---[H+]---A assemblies differ only by the proton configuration within the hydrogen bonding interface. Specifically, the amidinium transfers a proton to the carboxylate to form a non-ionized amidine-carboxylic acid two-point hydrogen network whereas the amidinium maintains both protons when bound to the sulfonate functionality forming an ionized amidinium-sulfonate two-point hydrogen network. These two interface configurations within the dyads thus allow for a direct comparison of PCET kinetics for the same donor and acceptor juxtaposed by an ionized and non-ionized hydrogen-bonded interface. Analysis of PCET kinetics ascertained from transient absorption and transient emission spectroscopy reveal that the ionized interface is more strongly impacted by the local solvent environment, thus establishing that the initial static configuration of the proton interface is a critical determinant to the kinetics of PCET. PMID:19489645

  16. Muon Tracking Studies in a Skew Parametric Resonance Ionization Cooling Channel

    SciTech Connect

    Sy, Amy; Afanaciev, Andre; Derbenev, Yaroslav S.; Johnson, Rolland; Morozov, Vasiliy

    2015-09-01

    Skew Parametric-resonance Ionization Cooling (SPIC) is an extension of the Parametric-resonance Ionization Cooling (PIC) framework that has previously been explored as the final 6D cooling stage of a high-luminosity muon collider. The addition of skew quadrupoles to the PIC magnetic focusing channel induces coupled dynamic behavior of the beam that is radially periodic. The periodicity of the radial motion allows for the avoidance of unwanted resonances in the horizontal and vertical transverse planes, while still providing periodic locations at which ionization cooling components can be implemented. A first practical implementation of the magnetic field components required in the SPIC channel is modeled in MADX. Dynamic features of the coupled correlated optics with and without induced parametric resonance are presented and discussed.

  17. Shock tube study of ionization rates of NaCl-contaminated argon

    NASA Technical Reports Server (NTRS)

    Schneider, K.-P.; Park, C.

    1975-01-01

    Electron density, electron temperature, and concentration of excited sodium atoms are measured in the weakly ionized regime behind a shock wave in impure argon in a shock tube using microwave techniques and spectrally resolved radiometry. Evidence is presented to show that an apparent increase in the rate of ionization is due to electron detachment of negative chlorine ions produced from sodium chloride vapor contained as an impurity. To be consistent with this chemical model, rate coefficients are found in the temperature range between 5500 and 8600 K for the dissociation of NaCl into an ion pair, dissociation of NaCl into a neutral pair, and electron detachment of a negative chlorine ion. Electron temperature is lower than heavy-particle temperature by roughly 1000 K. The electron-argon impact-ionization rate coefficient is a weak function of electron temperature in contradiction to expectation.

  18. Electron transfer, excitation, and ionization in {alpha}-H collisions studied with a Sturmian basis

    SciTech Connect

    Winter, Thomas G.

    2007-12-15

    Cross sections have been determined for electron transfer, direct excitation, and ionization in collisions between {alpha} particles and H(1s) atoms at {alpha} energies 3 keV-38.4 MeV, extending earlier work [Phys. Rev. A 25, 697 (1982)] restricted to total transfer at 20-200 keV. Transfer as well as excitation cross sections into individual states up to 3d have been determined with several coupled-Sturmian pseudostate bases, and tests of basis sensitivity have been carried out. These and ionization cross sections have been compared with existing experimental and other coupled-state results. Structure is observed in the lower-energy excitation cross sections, which is believed not to be an artifact of the bases used. Ionization and excitation cross sections have also been compared with corresponding Born results at higher energies.

  19. Cosmic ray studies with a gas Cherenkov counter in association with an ionization spectrometer

    NASA Technical Reports Server (NTRS)

    Balasubrahmanyan, V. K.; Ormes, J. F.; Arens, J. F.; Siohan, F.; Yodh, G. B.; Simon, M.; Spiegelhauer, H.

    1980-01-01

    The results from a balloon-borne gas Cherenkov counter (threshold 16.5 GeV/nucleon) and an ionization spectrometer are presented. The gas Cherenkov counter provides an absolute energy distribution for the response of the calorimeter for 5 or = Z 26 nuclei of cosmic rays. The contribution of scintillation to the gas Cherenkov pulse height was obtained by independently selecting particles below the gas Cherenkov threshold using the ionization spectrometer. Energy spectra were derived by minimizing the chi squared between Monte Carlo simulted data and flight data. Best fit power laws, dN/dE = AE-gamma, were determined for C, N, O, Ne, Mg, and Si. The power laws, all consistent with E (-2.7) are not good fits to the data. A better fit is obtained using the spectrum derived from the spectrometer. The data from the ionization calorimeter and the gas Cherenkov are thus completely self-consistent.

  20. Preferential formation of the different hydrogen bonds and their effects in tetrahydrofuran and tetrahydropyran microhydrated complexes.

    PubMed

    Vallejos, Margarita M; Peruchena, Nélida M

    2012-04-26

    The role of cycloether-water (c-w) and water-water (w-w) hydrogen bonds (H-bonds) on the stability of the tetrahydrofuran THF/(H(2)O)(n) and the tetrahydropyran THP/(H(2)O)(n) complexes with n = 1-4 was investigated herein using the density functional and ab initio methods and the atoms in molecules theory. Geometry optimizations for these complexes were carried out with various possible initial guess structures. It was revealed that the major contributions of the mono and dihydrated complexes came from c-w H-bonds. A competition between c-w and w-w H-bonds contribution was observed for trihydrated complexes. For most of tetrahydrated complexes, the inter-water H-bonds provided the greatest contribution, whereas the c-w contributions were small but not negligible. It was confirmed that to produce a hydrophobic hydration of cycloethers, the C-H···O(w) H-bond should be associated with a network of H-bonds that connects both portions of the solute, through the formation of a bifunctional H-bond. A linear correlation is obtained for the sum of electron density at the bond critical points (ρ(b)) with the interaction energy (ΔE) and with the solute-solvent interaction energy (ΔE(s-w)) of the microhydrated complexes. In addition, a new way to estimate the energetic contribution as well as the preferential formation of the different H-bonds based completely on ρ(b) was found. Even more, it allows to differentiate the contribution from c-w interactions in both hydrophilic and hydrophobic contributions, it is therefore a useful tool for studying the hydration of large biomolecules. The analysis of the modifications in the atomic and group properties brought about by successive addition of H(2)O molecules allowed to pinpoint the atoms or molecular groups that undergo the greatest changes in electron population and energetic stabilization. It was identified that the remarkable stabilization of the water oxygen atoms is crucial for the stabilization of the complexes.

  1. Phase Diagram of the System Water-Tetrahydrofuran-Ammonia at Titan's Crust Conditions

    NASA Astrophysics Data System (ADS)

    Munoz Iglesias, V.; Vu, T. H.; Choukroun, M.; Hodyss, R. P.; Smythe, W. D.; Sotin, C.

    2016-12-01

    Titan's crust is made of water ice, clathrate hydrates and ammonia hydrates. The atmosphere, mainly composed by nitrogen, also has a 5 % of methane (CH4) in the closer layer to the surface. CH4 is destroyed by the atmospheric photochemistry, and should have disappeared several million years ago. Different CH4 sources for this replenishment have been proposed, with a leading candidate being the dissociation of CH4-clathrates. In this work we have evaluated using calorimetry the effect of ammonia (NH3) on tetrahydrofuran (THF) clathrates, which we use as a 1 bar-proxy to understand the effect of NH3 on clathrates. We have studied the thermal evolution of the system H2O-THF-NH3, from 77 to 298 K, at THF:H2O molar ratios below and above THF-clathrate stoichiometry (1:17) and NH3 concentrations up to 30 wt%. Two phase diagrams can be drawn. At THF:H2O ratios below clathrate stoichiometry (1 THF to 17 H2O), H2O is in excess and the eutectic composition is formed by THF-clathrates, ammonia hydrates and water ice. The resulting phase diagram is parallel to the corresponding to the system H2O-NH3, which suggests that the effect of NH3 on clathrates is the same as on water ice. On the other hand, when THF is in excess relative to the stoichiometric ratio of clathrates to water, the extra THF forms a solid phase with the NH3. Both ammonia hydrates and THF-NH3 solids have lower melting temperatures than THF-clathrates and their melting promotes the same effect, which is the partial dissociation of the clathrates. This results in a very complex phase diagram, with an apparently THF-NH3 solid solution at low temperatures, and a phase behavior suggestive of immiscibility between a phase rich in NH3 and a phase rich in THF at higher temperatures. This research is supported by an appointment to the NASA Postdoctoral Program at the Jet Propulsion Laboratory, California Institute of Technology, administered by Universities Space Research Association (USRA) through a contract with

  2. Ionization energies of argon clusters: A combined experimental and theoretical study

    NASA Astrophysics Data System (ADS)

    Echt, O.; Fiegele, T.; Rümmele, M.; Probst, M.; Matt-Leubner, S.; Urban, J.; Mach, P.; Leszczynski, J.; Scheier, P.; Märk, T. D.

    2005-08-01

    We have measured appearance energies of Arn+,n⩽30, by electron impact of gas phase clusters. Quantum-chemical calculations have been performed to determine the adiabatic and vertical ionization energies of argon clusters up to n =4 and 6, respectively. The experimental appearance energy of the dimer ion approaches, under suitable cluster source conditions, the adiabatic ionization energy. The agreement with values obtained by photoionization and threshold photoelectron-photoion coincidence (TPEPICO) spectra demonstrates that autoionizing Rydberg states are accessible by electron impact. Appearance energies of larger clusters, though, exceed the TPEPICO values by about 0.5 eV.

  3. Active vibrations of 1-cyanonaphthalene cation studied by mass-analyzed threshold ionization spectroscopy

    NASA Astrophysics Data System (ADS)

    Shivatare, Vidya; Tzeng, Sheng Yuan; Tzeng, Wen Bih

    2013-02-01

    We apply the two-color resonant two-photon mass-analyzed threshold ionization (MATI) spectroscopic technique to record the cation spectra of 1-cyanonaphthalene via four intermediate vibronic levels. The adiabatic ionization energy is determined to be 69 466 ± 5 cm-1. The distinct bands at 416, 472, 516, 669, and 852 cm-1 result from in-plane ring deformation vibrations of the cation. Analysis of these MATI spectra suggests that the molecular geometry and vibrational coordinates of the observed vibrations of the cation in the ground D0 state resemble those of the neutral in the electronically excited S1 state.

  4. Electron ionization of the nucleobases adenine and hypoxanthine near the threshold: a combined experimental and theoretical study.

    PubMed

    Dawley, M Michele; Tanzer, Katrin; Cantrell, William A; Plattner, Peter; Brinkmann, Nicole R; Scheier, Paul; Denifl, Stephan; Ptasińska, Sylwia

    2014-12-07

    Electron ionization of the DNA nucleobase, adenine, and the tRNA nucleobase, hypoxanthine, was investigated near the threshold region (∼5-20 eV) using a high-resolution hemispherical electron monochromator and a quadrupole mass spectrometer. Ion efficiency curves of the threshold regions and the corresponding appearance energies (AEs) are presented for the parent cations and the five most abundant fragment cations of each molecule. The experimental ionization energies (IEs) of adenine and hypoxanthine were determined to be 8.70 ± 0.3 eV and 8.88 ± 0.5 eV, respectively. Quantum chemical calculations (B3LYP/6-311+G(2d,p)) yielded a vertical IE of 8.08 eV and an adiabatic IE of 8.07 eV for adenine and a vertical IE of 8.51 eV and an adiabatic IE of 8.36 eV for hypoxanthine, and the lowest energy optimized structures of the fragment cations and their respective neutral species were calculated. The enthalpies of the possible reactions from the adenine and hypoxanthine cations were also obtained computationally, which assisted in determining the most likely electron ionization pathways leading to the major fragment cations. Our results suggest that the imidazole ring is more stable than the pyrimidine ring in several of the fragmentation reactions from both adenine and hypoxanthine. This electron ionization study contributes to the understanding of the biological effects of electrons on nucleobases and to the database of the electronic properties of biomolecules, which is necessary for modeling the damage of DNA in living cells that is induced by ionizing radiation.

  5. 2,5-Disubstituted tetrahydrofurans as selective serotonin re-uptake inhibitors.

    PubMed

    Voelker, Troy; Xia, Haiji; Fandrick, Keith; Johnson, Robert; Janowsky, Aaron; Cashman, John R

    2009-03-01

    Enhancement of 5-hydroxytryptamine (5-HT, serotonin) neurotransmission is a viable means of treating depression. On the basis of this observation, agents that inhibit re-uptake of 5-HT were prepared based on (-)-cocaine and aryltropanes as lead compounds because they are reasonably potent 5-HT re-uptake inhibitors. Molecular dissection of an aryltropane provided a series of 5- and 6-membered ring compounds. From among this library of compounds a series of disubstituted tetrahydrofurans bearing 2-alkyl aryl and 5-alkyl amino groups were identified as having highly potent and selective 5-HT re-uptake inhibition. The compounds were evaluated for their ability to compete with radiolabeled RTI-55 binding and to inhibit re-uptake of neurotransmitters at the human dopamine, serotonin and norepinephrine transporters. Based on potency (e.g., K(i)=800 pM) and significant functional selectivity (e.g., IC(50) ratios for human dopamine:serotonin or norepinephrine:serotonin, >or=1397) highly potent and selective serotonin re-uptake inhibitors were identified. Optimal features playing a dominant role in binding affinity and re-uptake inhibition included lipophilic substitution on the aromatic moiety, trans relative stereochemistry of the 2,5-disubstituted tetrahydrofuran ring, and a total of four or five methylene groups between the alkyl amine and the alkyl aryl moiety and the tetrahydrofuran group. A number of the most potent serotonin re-uptake inhibitors were tested in Balb/c mice in the forced-swim test (FST), a behavioral test used to measure the effects of antidepressant agents. Acute administration of 32c (10mg/kg), or 32d (10mg/kg) ip tended to decrease the duration of mouse immobility in the FST although the effect was not statistically significant.

  6. IONIZATION CHAMBER

    DOEpatents

    Redman, W.C.; Shonka, F.R.

    1958-02-18

    This patent describes a novel ionization chamber which is well suited to measuring the radioactivity of the various portions of a wire as the wire is moved at a uniform speed, in order to produce the neutron flux traverse pattern of a reactor in which the wire was previously exposed to neutron radiation. The ionization chamber of the present invention is characterized by the construction wherein the wire is passed through a tubular, straight electrode and radiation shielding material is disposed along the wire except at an intermediate, narrow area where the second electrode of the chamber is located.

  7. Mechanical properties of sand, silt, and clay containing tetrahydrofuran hydrate

    USGS Publications Warehouse

    Yun, T.S.; Santamarina, C.J.; Ruppel, C.

    2007-01-01

    The mechanical behavior of hydrate-bearing sediments subjected to large strains has relevance for the stability of the seafloor and submarine slopes, drilling and coring operations, and the analysis of certain small-strain properties of these sediments (for example, seismic velocities). This study reports on the results of comprehensive axial compression triaxial tests conducted at up to 1 MPa confining pressure on sand, crushed silt, precipitated silt, and clay specimens with closely controlled concentrations of synthetic hydrate. The results show that the stress-strain behavior of hydrate-bearing sediments is a complex function of particle size, confining pressure, and hydrate concentration. The mechanical properties of hydrate-bearing sediments at low hydrate concentration (probably 50% of pore space), the behavior becomes more independent of stress because the hydrates control both stiffness and strength and possibly the dilative tendency of sediments by effectively increasing interparticle coordination, cementing particles together, and filling the pore space. The cementation contribution to the shear strength of hydrate-bearing sediments decreases with increasing specific surface of soil minerals. The lower the effective confining stress, the greater the impact of hydrate formation on normalized strength.

  8. Mechanical properties of sand, silt, and clay containing tetrahydrofuran hydrate

    NASA Astrophysics Data System (ADS)

    Yun, T. S.; Santamarina, J. C.; Ruppel, C.

    2007-04-01

    The mechanical behavior of hydrate-bearing sediments subjected to large strains has relevance for the stability of the seafloor and submarine slopes, drilling and coring operations, and the analysis of certain small-strain properties of these sediments (for example, seismic velocities). This study reports on the results of comprehensive axial compression triaxial tests conducted at up to 1 MPa confining pressure on sand, crushed silt, precipitated silt, and clay specimens with closely controlled concentrations of synthetic hydrate. The results show that the stress-strain behavior of hydrate-bearing sediments is a complex function of particle size, confining pressure, and hydrate concentration. The mechanical properties of hydrate-bearing sediments at low hydrate concentration (probably < 40% of pore space) appear to be determined by stress-dependent soil stiffness and strength. At high hydrate concentrations (>50% of pore space), the behavior becomes more independent of stress because the hydrates control both stiffness and strength and possibly the dilative tendency of sediments by effectively increasing interparticle coordination, cementing particles together, and filling the pore space. The cementation contribution to the shear strength of hydrate-bearing sediments decreases with increasing specific surface of soil minerals. The lower the effective confining stress, the greater the impact of hydrate formation on normalized strength.

  9. Differential cross sections for electron-impact vibrational-excitation of tetrahydrofuran at intermediate impact energies

    SciTech Connect

    Do, T. P. T.; Lopes, M. C. A.; Konovalov, D. A.; White, R. D.; Brunger, M. J. E-mail: darryl.jones@flinders.edu.au; Jones, D. B. E-mail: darryl.jones@flinders.edu.au

    2015-03-28

    We report differential cross sections (DCSs) for electron-impact vibrational-excitation of tetrahydrofuran, at intermediate incident electron energies (15-50 eV) and over the 10°-90° scattered electron angular range. These measurements extend the available DCS data for vibrational excitation for this species, which have previously been obtained at lower incident electron energies (≤20 eV). Where possible, our data are compared to the earlier measurements in the overlapping energy ranges. Here, quite good agreement was generally observed where the measurements overlapped.

  10. Tris(4-formyl-phen-yl)phosphane oxide tetra-hydro-furan hemisolvate.

    PubMed

    Kakoullis, James; Fronczek, Frank R; Maverick, Andrew W

    2013-01-01

    The title compound, C21H15O4P·0.5C4H8O, contains an ordered phosphane oxide in a general position and a tetra-hydro-furan solvent mol-ecule disordered about a twofold axis. All three aldehyde substituents are nearly coplanar with their attached benzene rings, with C-C-C-O torsion angles in the range 1.64 (17)-4.24 (19)°. All three have different conformations with respect to the P=O group, one syn, one anti, and one gauche. Two of the aldehyde substituents form inter-molecular C-H⋯O contacts.

  11. Palladium-catalyzed synthesis of 2,1'-disubstituted tetrahydrofurans from gamma-hydroxy internal alkenes. Evidence for alkene insertion into a Pd-O bond and stereochemical scrambling via beta-hydride elimination.

    PubMed

    Hay, Michael B; Wolfe, John P

    2005-11-30

    Palladium-catalyzed reactions of gamma-hydroxy internal acyclic alkenes with aryl bromides afford 2,1'-disubstituted tetrahydrofurans in good yields with diastereoselectivities of 3-5:1. The analogous transformations of substrates bearing internal cyclic alkenes afford fused bicyclic and spirocyclic tetrahydrofuran derivatives in good yields with excellent diastereoselectivities (>20:1). A series of deuterium labeling experiments indicate that the origin of the modest diastereoselectivity in reactions of acyclic internal alkene substrates likely derives from a series of reversible beta-hydride elimination and sigma-bond rotation processes that occur following a rare intramolecular alkene syn-insertion into an intermediate Pd(Ar)(OR) complex. In addition, these studies shed light on the chemoselectivity of insertion, suggesting that the alkene inserts into the Pd-O bond in preference to the Pd-C bond.

  12. Palladium-Catalyzed Synthesis of 2,1′-Disubstituted Tetrahydrofurans from γ-Hydroxy Internal Alkenes. Evidence for Alkene Insertion into a Pd-O bond and Stereochemical Scrambling via β-Hydride Elimination

    PubMed Central

    Hay, Michael B.; Wolfe, John P.

    2009-01-01

    Palladium-catalyzed reactions of γ-hydroxy internal acyclic alkenes with aryl bromides afford 2,1′-disubstituted tetrahydrofurans in good yields with diastereoselectivities of 3-5:1. The analogous transformations of substrates bearing internal cyclic alkenes afford fused bicyclic and spirocyclic tetrahydrofuran derivatives in good yields with excellent diastereoselectivities (>20:1). A series of deuterium labeling experiments indicate that the origin of the modest diastereoselectivity in reactions of acyclic internal alkene substrates likely derives from a series of reversible β-hydride elimination and σ-bond rotation processes that occur following a rare intramolecular syn-alkene insertion into an intermediate Pd(Ar)(OR) complex. In addition, these studies shed light on the chemoselectivity of insertion, suggesting that the alkene inserts into the Pd-O bond in preference to the Pd-C bond. PMID:16305233

  13. New MOF based on lithium tetrahydrofuran-2,3,4,5-tetracarboxylate: Its structure and conductivity behavior

    SciTech Connect

    Zima, Vitezslav; Patil, Deepak S.; Raja, Duraisamy Senthil; Chang, Ting-Guang; Lin, Chia-Her; Shimakawa, Koichi; Wagner, Tomas

    2014-09-15

    A novel metal–organic framework, [Li{sub 6}(HTFTA){sub 2}(H{sub 2}O){sub 3}]·3H{sub 2}O (LiTFTA, H{sub 4}TFTA is tetrahydrofuran-2,3,4,5-tetracarboxylic acid), has been synthesized under solvothermal conditions and its structure was determined by single-crystal X-ray diffraction studies. It has six different LiO{sub 4} tetrahedra which forms two kinds of tetranuclear clusters that are coordinated to the ligands and form an overall three-dimensional structure with channels running along the crystallographic a axis. Some of the carboxylate groups of the ligand moiety jut out into the channels and the channels are occupied by water molecules. The proton conductivity behavior of LiTFTA with respect to temperature and relative humidity was analyzed by our newly developed impedance data analysis method called a random-walk approach. The results were compared with the data obtained by an analysis using an equivalent electric circuit model. Based on the physical parameters obtained by the random-walk method and the known structure we suggested the mechanism of the proton conductivity in this material. The proton conduction proceeds most probably by a vehicle conduction mechanism which employs mainly water molecules of crystallization present in the channels of LiTFTA. The value of the diffusion coefficient increases with temperature whereas the number of charge carriers remains constant. On the other hand, both the number of charge carriers and diffusion coefficient increase with increasing relative humidity. - Graphical abstract: Structure of a new metal organic framework was determined and its ionic conductivity was evaluated using a random-walk approach. - Highlights: • Lithium tetrahydrofuran-2,3,4,5-tetracarboxylate is a MOF with water-filled pores. • The impedance spectra indicate that this material is ion conductive. • Conductivity was evaluated using a random walk approach. • The number of charge carriers and diffusion coefficient was determined.

  14. Ionizing Radiation and Risk of Chronic Lymphocytic Leukemia in the 15-Country Study of Nuclear Industry Workers

    PubMed Central

    Vrijheid, Martine; Cardis, Elisabeth; Ashmore, Patrick; Auvinen, Anssi; Gilbert, Ethel; Habib, Rima R.; Malker, Hans; Muirhead, Colin R.; Richardson, David B.; Rogel, Agnes; Schubauer-Berigan, Mary; Tardy, Hélène; Telle-Lamberton, Maylis

    2014-01-01

    In contrast to other types of leukemia, chronic lymphocytic leukemia (CLL) has long been regarded as non-radiogenic, i.e. not caused by ionizing radiation. However, the justification for this view has been challenged. We therefore report on the relationship between CLL mortality and external ionizing radiation dose within the 15-country nuclear workers cohort study. The analyses included, in seven countries with CLL deaths, a total of 295,963 workers with more than 4.5 million person-years of follow-up and an average cumulative bone marrow dose of 15 mSv; there were 65 CLL deaths in this cohort. The relative risk (RR) at an occupational dose of 100 mSv compared to 0 mSv was 0.84 (95% CI 0.39, 1.48) under the assumption of a 10-year exposure lag. Analyses of longer lag periods showed little variation in the RR, but they included very small numbers of cases with relatively high doses. In conclusion, the largest nuclear workers cohort study to date finds little evidence for an association between low doses of external ionizing radiation and CLL mortality. This study had little power due to low doses, short follow-up periods, and uncertainties in CLL ascertainment from death certificates; an extended follow-up of the cohorts is merited and would ideally include incident cancer cases. PMID:18959468

  15. Electron ionization of acetylene.

    PubMed

    King, Simon J; Price, Stephen D

    2007-11-07

    Relative partial ionization cross sections and precursor specific relative partial ionization cross sections for fragment ions formed by electron ionization of C2H2 have been measured using time-of-flight mass spectrometry coupled with a 2D ion-ion coincidence technique. We report data for the formation of H+, H+2, C2+, C+/C2+ 2, CH+/C2H+2, CH+2, C+2, and C2H+ relative to the formation of C2H+2, as a function of ionizing electron energy from 30-200 eV. While excellent agreement is found between our data and one set of previously published absolute partial ionization cross sections, some discrepancies exist between the results presented here and two other recent determinations of these absolute partial ionization cross sections. We attribute these differences to the loss of some translationally energetic fragment ions in these earlier studies. Our relative precursor-specific partial ionization cross sections enable us, for the first time, to quantify the contribution to the yield of each fragment ion from single, double, and triple ionization. Analysis shows that at 50 eV double ionization contributes 2% to the total ion yield, increasing to over 10% at an ionizing energy of 100 eV. From our ion-ion coincidence data, we have derived branching ratios for charge separating dissociations of the acetylene dication. Comparison of our data to recent ab initio/RRKM calculations suggest that close to the double ionization potential C2H2+2 dissociates predominantly on the ground triplet potential energy surface (3Sigma*g) with a much smaller contribution from dissociation via the lowest singlet potential energy surface (1Delta g). Measurements of the kinetic energy released in the fragmentation reactions of C2H2+2 have been used to obtain precursor state energies for the formation of product ion pairs, and are shown to be in good agreement with available experimental data and with theory.

  16. "Magic" Ionization Mass Spectrometry.

    PubMed

    Trimpin, Sarah

    2016-01-01

    The systematic study of the temperature and pressure dependence of matrix-assisted ionization (MAI) led us to the discovery of the seemingly impossible, initially explained by some reviewers as either sleight of hand or the misinterpretation by an overzealous young scientist of results reported many years before and having little utility. The “magic” that we were attempting to report was that with matrix assistance, molecules, at least as large as bovine serum albumin (66 kDa), are lifted into the gas phase as multiply charged ions simply by exposure of the matrix:analyte sample to the vacuum of a mass spectrometer. Applied heat, a laser, or voltages are not necessary to achieve charge states and ion abundances only previously observed with electrospray ionization (ESI). The fundamentals of how solid phase volatile or nonvolatile compounds are converted to gas-phase ions without added energy currently involves speculation providing a great opportunity to rethink mechanistic understanding of ionization processes used in mass spectrometry. Improved understanding of the mechanism(s) of these processes and their connection to ESI and matrix-assisted laser desorption/ionization may provide opportunities to further develop new ionization strategies for traditional and yet unforeseen applications of mass spectrometry. This Critical Insights article covers developments leading to the discovery of a seemingly magic ionization process that is simple to use, fast, sensitive, robust, and can be directly applied to surface characterization using portable or high performance mass spectrometers.

  17. "Magic" Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Trimpin, Sarah

    2016-01-01

    The systematic study of the temperature and pressure dependence of matrix-assisted ionization (MAI) led us to the discovery of the seemingly impossible, initially explained by some reviewers as either sleight of hand or the misinterpretation by an overzealous young scientist of results reported many years before and having little utility. The "magic" that we were attempting to report was that with matrix assistance, molecules, at least as large as bovine serum albumin (66 kDa), are lifted into the gas phase as multiply charged ions simply by exposure of the matrix:analyte sample to the vacuum of a mass spectrometer. Applied heat, a laser, or voltages are not necessary to achieve charge states and ion abundances only previously observed with electrospray ionization (ESI). The fundamentals of how solid phase volatile or nonvolatile compounds are converted to gas-phase ions without added energy currently involves speculation providing a great opportunity to rethink mechanistic understanding of ionization processes used in mass spectrometry. Improved understanding of the mechanism(s) of these processes and their connection to ESI and matrix-assisted laser desorption/ionization may provide opportunities to further develop new ionization strategies for traditional and yet unforeseen applications of mass spectrometry. This Critical Insights article covers developments leading to the discovery of a seemingly magic ionization process that is simple to use, fast, sensitive, robust, and can be directly applied to surface characterization using portable or high performance mass spectrometers.

  18. Matrix-Free UV-Laser Desorption Ionization Mass Spectrometry as a Versatile Approach for Accelerating Dereplication Studies on Lichens.

    PubMed

    Le Pogam, Pierre; Schinkovitz, Andreas; Legouin, Béatrice; Le Lamer, Anne-Cécile; Boustie, Joël; Richomme, Pascal

    2015-10-20

    The present study examined the suitability of laser desorption/ionization time-of-flight mass spectrometry (LDI-MS) for the rapid chemical fingerprinting of lichen extracts. Lichens are known to produce a wide array of secondary metabolites. Most of these compounds are unique to the symbiotic condition but some can be found in many species. Therefore, dereplication, that is, the rapid identification of known compounds within a complex mixture is crucial in the search for novel natural products. Over the past decade, significant advances were made in analytical techniques and profiling methods specifically adapted to crude lichen extracts, but LDI-MS has never been applied in this context. However, most classes of lichen metabolites have UV chromophores, which are quite similar to commercial matrix molecules used in matrix-assisted laser desorption ionization (MALDI). It is consequently postulated that these molecules could be directly detectable by matrix-free LDI-MS. The present study evaluated the versatility of this technique by investigating the LDI properties of a vast array of single lichen metabolites as well as lichen extracts of known chemical composition. Results from the LDI experiments were compared with those obtained by direct ESI-MS detection as well as LC-ESI-MS. It was shown that LDI ionization leads to strong molecular ion formation with little fragmentation, thus, facilitating straightforward spectra interpretation and representing a valuable alternative to time-consuming LC-MS analysis.

  19. Epalrestat tetra-hydro-furan monosolvate: crystal structure and phase transition.

    PubMed

    Umeda, Daiki; Putra, Okky Dwichandra; Gunji, Mihoko; Fukuzawa, Kaori; Yonemochi, Etsuo

    2017-07-01

    The title compound, epalrestat {systematic name: (5Z)-5-[(2E)-2-methyl-3-phenyl-prop-2-en-1-yl-idene]-4-oxo-2-sulfanyl-idene-1,3-thia-zolidine-3-acetic acid}, crystallized as a tetra-hydro-furan monosolvate, C15H13NO3S2·C4H8O. Epalrestat, an important drug for diabetic neuropathy, has been reported to exist in polymphic, solvated and co-crystal forms. In the mol-ecule reported here, the phenyl ring is inclined to the rhodamine ring by 22.31 (9)°, and the acetic acid group is almost normal to the rhodamine ring, making a dihedral angle of 88.66 (11)°. In the crystal, pairs of O-H⋯O hydrogen bonds are observed between the carb-oxy-lic acid groups of epalerstat mol-ecules, forming inversion dimers with an R2(2)(8) loop. The dimers are linked by pairs of C-H⋯O hydrogen bonds, forming chains along [101]. The solvate mol-ecules are linked to the chain by a C-H⋯O(tetra-hydro-furan) hydrogen bond. A combination of thermal analysis and powder X-ray diffraction revealed that title compound desolvated into epalerstat Form II. One C atom of the tetra-hydro-furan solvate mol-ecule is positionally disordered and has a refined occupancy ratio of 0.527 (18):0.473 (18).

  20. In vitro antileishmanial and antimalarial activities of tetrahydrofuran lignans isolated from Nectandra megapotamica (Lauraceae).

    PubMed

    da Silva Filho, Ademar A; Costa, Eveline S; Cunha, Wilson R; e Silva, Márcio L A; Nanayakkara, N P Dhammika; Bastos, Jairo K

    2008-10-01

    Seven tetrahydrofuran lignans, isolated from Nectandra megapotamica (Lauraceae), were evaluated for their in vitro antileishmanial and antimalarial activities. Among the evaluated compounds, machilin-G (1a) and veraguensin (2a) showed the highest antileishmanial activities, displaying for both compounds an IC(50) value of 18 microg/mL and an IC(90) value of 36 microg/mL, while galgravin (1b), nectandrin-A (1c), nectandrin-B (1d), calopeptin (2b) and ganshisandrine (3) were inactive against Leishmania donovani. In the antimalarial assay against Plasmodium falciparum, it was observed that calopeptin (2b) displayed moderate activity, with IC(50) values of 3800 ng/mL (D6 clone) and 3900 ng/mL (W2 clone), while the lignans 1a-1d, 2a and 3 were inactive. In order to compare the effect on the parasites with toxicity to mammalian cells, the cytotoxic activity of the isolated compounds were evaluated against the Vero cells, showing that all evaluated tetrahydrofuran lignans exhibited no cytotoxicity at the maximum dose tested. (c) 2008 John Wiley & Sons, Ltd.

  1. Electron impact ionization in plasma technologies; studies on atomic boron and BN molecule

    SciTech Connect

    Joshi, Foram M.; Joshipura, K. N.; Chaudhari, Asha S.

    2016-05-06

    Electron impact ionization plays important role in plasma technologies. Relevant cross sections on atomic boron are required to understand the erosion processes in fusion experiments. Boronization of plasma exposed surfaces of tokomaks has proved to be an effective way to produce very pure fusion plasmas. This paper reports comprehensive theoretical investigations on electron scattering with atomic Boron and Boron Nitride in solid phases. Presently we determine total ionization cross-section Q{sub ion} and the summed-electronic excitation cross section ΣQ{sub exc} in a standard quantum mechanical formalism called SCOP and CSP-ic methods. Our calculated cross sections are examined as functions of incident electron energy along with available comparisons.

  2. Studies of Flow in Ionized Gas: Historical Perspective, Contemporary Experiments, and Applications

    SciTech Connect

    Popovic, S.; Vuskovic, L.

    2007-04-23

    Since the first observations that a very small ionized fraction (order of 1 ppm) could strongly affect the gas flow, numerous experiments with partially or fully wall-free discharges have demonstrated the dispersion of shock waves, the enhancement of lateral forces in the flow, the prospects of levitation, and other aerodynamic effects with vast potential of application. A review of physical effects and observations are given along with current status of their interpretation. Special attention will be given to the physical problems of energy efficiency in generating wall-free discharges and the phenomenology of filamentary discharges. Comments and case examples are given on the current status of availability of necessary data for modelling and simulation of the aerodynamic phenomena in weakly ionized gas.

  3. Cosmic ray studies with a gas Cerenkov counter in association with an ionization spectrometer

    NASA Technical Reports Server (NTRS)

    Balasubrahmanyan, V. K.; Ormes, J. F.; Arens, J. F.; Siohan, F.; Simon, M.; Spiegelhauer, H.; Yodh, G. B.

    1980-01-01

    The results from a balloon-borne gas Cerenkov counter (threshold 16.5 GeV/nuc) and an ionization spectrometer are presented. The gas Cerenkov counter provides an absolute energy calibration for the response of the calorimeter for the Z range of 5-26 nuclei of cosmic rays. The contribution of scintillation to the gas Cerenkov pulse height has been obtained by independently selecting particles below the gas Cerenkov threshold using the ionization spectrometer. Energy spectra were derived by minimizing the chi-squared between a Monte Carlo simulated data and flight data. Best fit power laws were determined for C, N, O, Ne, Mg, and Si. The power laws, all consistent with E exp-2.7, are not good fits to the data. A better fit is obtained using the spectrum derived from the spectrometer.

  4. Photon-echo studies of collisional relaxation in weakly ionized noble-gas mixtures.

    PubMed

    Woodworth, M R

    1983-06-01

    Photon-echo relaxation rates are measured in weakly ionized plasmas of binary mixtures of noble gases, in which the photon echo generated on a transition in one noble-gas species is damped primarily by atoms of the second species. The special cases of pure krypton and xenon are extensions of previous work in pure helium, neon, and argon. With the exception of mixtures with helium as the perturber, measured relaxation rates are consistent with collisional line-broadening calculations.

  5. Multielectron coincidence study of the double Auger decay of 3d-ionized krypton

    SciTech Connect

    Andersson, E.; Hedin, L.; Rubensson, J.-E.; Karlsson, L.; Feifel, R.; Fritzsche, S.; Linusson, P.; Eland, J. H. D.

    2010-10-15

    Multielectron coincidence data for triple ionization of krypton have been recorded above the 3d ionization threshold at two photon energies (140 and 150 eV). Three principal transition pathways have been observed, two involving double Auger transitions from Kr{sup +}, and one involving single Auger transitions from Kr{sup 2+} created by direct single-photon double ionization. The decay of the 3d{sup 9} {sup 2}D{sub 5/2,3/2} states in Kr{sup +} has been analyzed in some detail and is found to be strongly dominated by cascade processes where two electrons with well-defined energies are emitted. The decay paths leading to the 4s{sup 2}4p{sup 3} {sup 4}S, {sup 2}D, and {sup 2}P states of Kr{sup 3+} are analyzed and energies of seven intermediate states in Kr{sup 2+} are given. A preliminary investigation of the decay paths from Kr{sup +} 3d{sup 9}4p{sup 5}nl shake-up states has also been carried out.

  6. Large-area field-ionization detector for the study of Rydberg atoms

    NASA Astrophysics Data System (ADS)

    Jones, A. C. L.; Piñeiro, A. M.; Roeder, E. E.; Rutbeck-Goldman, H. J.; Tom, H. W. K.; Mills, A. P.

    2016-11-01

    We describe here the development and characterization of a micro-channel plate (MCP) based detector designed for the efficient collection and detection of Rydberg positronium (Ps) atoms for use in a time-of-flight apparatus. The designed detector collects Rydberg atoms over a large area (˜4 times greater than the active area of the MCP), ionizing incident atoms and then collecting and focusing the freed positrons onto the MCP. Here we discuss the function, design, and optimization of the device. The detector has an efficiency for Rydberg Ps that is two times larger than that of the γ-ray scintillation detector based scheme it has been designed to replace, with half the background signal. In principle, detectors of the type described here could be readily employed for the detection of any Rydberg atom species, provided a sufficient field can be applied to achieve an ionization rate of ≥108/s. In such cases, the best time resolution would be achieved by collecting ionized electrons rather than the positive ions.

  7. Charge migration in the bifunctional PENNA cation induced and probed by ultrafast ionization: a dynamical study

    NASA Astrophysics Data System (ADS)

    Mignolet, B.; Levine, R. D.; Remacle, F.

    2014-06-01

    A full dynamical simulation shows that the charge transfer between the amine and the phenyl moieties of the cation of the bifunctional molecule 2-phenylethyl-N,N-dimethylamine can be induced and subsequently probed by two ultrashort photoionizations. The first ionization of the pump-probe scheme is by a 1.5 fs UV or 6 fs IR pulse that ionizes the neutral. The pump pulse can be tailored to produce a coherent superposition of the electronic states of the cation that differ in their energy and spatial localization of their electron density. The time-dependent amplitudes of the states of the superposition means that the state of the cation is not stationary and we show that it is beating between the two ends of the molecule. This beating is next probed by a second attosecond XUV pulse. The ultrafast photoionization of the cation to the dication probes the spatial charge reorganization in the cation. We use the computed time-dependent molecular frame photoelectron angular distributions as a quantitative measure of the charge migration. The computation of the dynamics are carried out by a coupled equation scheme that includes an electronic manifold for the three charge states: neutral, cation and dication, the coupling to the ionization continua of the cation and the dication and the dynamics induced by the pump and the probe pulses.

  8. Studies of the Twin Helix Parametric-resonance Ionization Cooling Channel with COSY INFINITY

    SciTech Connect

    J.A. Maloney, K.B. Beard, R.P. Johnson, A. Afanasev, S.A. Bogacz, Y.S. Derbenev, V.S. Morozov, B. Erdelyi

    2012-07-01

    A primary technical challenge to the design of a high luminosity muon collider is an effective beam cooling system. An epicyclic twin-helix channel utilizing parametric-resonance ionization cooling has been proposed for the final 6D cooling stage. A proposed design of this twin-helix channel is presented that utilizes correlated optics between the horizontal and vertical betatron periods to simultaneously focus transverse motion of the beam in both planes. Parametric resonance is induced in both planes via a system of helical quadrupole harmonics. Ionization cooling is achieved via periodically placed wedges of absorbing material, with intermittent rf cavities restoring longitudinal momentum necessary to maintain stable orbit of the beam. COSY INFINITY is utilized to simulate the theory at first order. The motion of particles around a hyperbolic fixed point is tracked. Comparison is made between the EPIC cooling channel and standard ionization cooling effects. Cooling effects are measured, after including stochastic effects, for both a single particle and a distribution of particles.

  9. The 30 Doradus Nebula: An Imaging Study of Molecular and Ionized Hydrogen

    NASA Astrophysics Data System (ADS)

    Yeh, Sherry; Seaquist, E. R.; Matzner, C. D.

    2013-01-01

    We present the very first, fully calibrated H2 1--0 S(1) image of the entire 30 Doradus nebula. The observations were carried out using the NOAO Extremely Wide Field Infrared Imager on the CTIO 4-meter telescope. Together with a Brγ image of 30 Dor taken by NEWFIRM, our images reveal the morphologies of the warm molecular gas and ionized gas in 30 Doradus. Based on the morphologies of H2 and Brγ, line ratio H2 to Brγ, and Cloudy models, we found that the H2 emission is formed inside the photodissociation regions of 30 Doradus, very close to the surface in association with the ionization front of the HII region. We also suggest that the bright H2-emitting area, which expands from the northeast to the southwest of R136, is a photodissociation region viewed face-on, while many clumps and elephant trunk features located at the outer shells of 30 Doradus are also photodissociation regions viewed edge-on. The characteristic radiation to gas pressure ratio is evaluated at selected regions in 30 Doradus, and we conclude that radiation pressure is not the dominating force at the current phase of 30 Doradus, while the pressurization of stellar winds and the injection of photoevaporative flows are likely the major feedback mechanisms acting to reduce the observed ionization parameter in 30 Doradus.

  10. Theoretical study of ionization and one-electron oxidation potentials of N-heterocyclic compounds.

    PubMed

    Sviatenko, Liudmyla K; Gorb, Leonid; Hill, Frances C; Leszczynski, Jerzy

    2013-05-15

    A number of density functionals was utilized to predict gas-phase adiabatic ionization potentials (IPs) for nitrogen-rich heterocyclic compounds. Various solvation models were applied to the calculation of difference in free energies of solvation of oxidized and reduced forms of heterocyclic compounds in acetonitrile (AN) for correct reproduction of their standard oxidation potentials. We developed generally applicable protocols that could successfully predict the gas-phase adiabatic ionization potentials of nitrogen-rich heterocyclic compounds and their standard oxidation potentials in AN. This approach is supported by a MPW1K/6-31+G(d) level of theory which uses SMD(UA0) approximation for estimation of solvation energy of neutral molecules and PCM(UA0) model for ionized ones. The mean absolute derivation (MAD) and root mean square error (RMSE) of the current theoretical models for IP are equal to 0.22 V and 0.26, respectively, and for oxidation potentials MAD = 0.13 V and RMSE = 0.17.

  11. Understanding the Phase Behavior of Tetrahydrofuran + Carbon Dioxide, + Methane, and + Water Binary Mixtures from the SAFT-VR Approach.

    PubMed

    Míguez, J M; Piñeiro, M M; Algaba, J; Mendiboure, B; Torré, J P; Blas, F J

    2015-11-05

    The high-pressure phase diagrams of the tetrahydrofuran(1) + carbon dioxide(2), + methane(2), and + water(2) mixtures are examined using the SAFT-VR approach. Carbon dioxide molecule is modeled as two spherical segments tangentially bonded, water is modeled as a spherical segment with four associating sites to represent the hydrogen bonding, methane is represented as an isolated sphere, and tetrahydrofuran is represented as a chain of m tangentially bonded spherical segments. Dispersive interactions are modeled using the square-well intermolecular potential. In addition, two different molecular model mixtures are developed to take into account the subtle balance between water-tetrahydrofuran hydrogen-bonding interactions. The polar and quadrupolar interactions present in water, tetrahydrofuran, and carbon dioxide are treated in an effective way via square-well potentials of variable range. The optimized intermolecular parameters are taken from the works of Giner et al. (Fluid Phase Equil. 2007, 255, 200), Galindo and Blas (J. Phys. Chem. B 2002, 106, 4503), Patel et al. (Ind. Eng. Chem. Res. 2003, 42, 3809), and Clark et al. (Mol. Phys. 2006, 104, 3561) for tetrahydrofuran, carbon dioxide, methane, and water, respectively. The phase diagrams of the binary mixtures exhibit different types of phase behavior according to the classification of van Konynenburg and Scott, ranging from types I, III, and VI phase behavior for the tetrahydrofuran(1) + carbon dioxide(2), + methane(2), and + water(2) binary mixtures, respectively. This last type is characterized by the presence of a Bancroft point, positive azeotropy, and the so-called closed-loop curves that represent regions of liquid-liquid immiscibility in the phase diagram. The system exhibits lower critical solution temperatures (LCSTs), which denote the lower limit of immiscibility together with upper critical solution temperatures (UCSTs). This behavior is explained in terms of competition between the incompatibility

  12. A new approach for the study of gas-phase ion-ion reactions using electrospray ionization.

    PubMed

    Ogorzalek Loo, R R; Udseth, H R; Smith, R D

    1992-10-01

    A simple flow reactor which facilitates the study and application of ion-ion and ion-molecule reactions at near atmospheric pressures is reported. Reactant ions were generated by electrospray ionization and discharge ionization methods, although any ionization sources amenable to atmospheric pressure may be used. Ions of opposite charge are generated in spatially separate ion sources and are swept into capillary inlets where the flows are merged and where reaction(s) can occur. Among the reactions investigated were the partial neutralization of multiply protonated polypeptides and proteins such as melittin, bradykinin, cytochrome c, and myoglobin by reaction with discharge-generated anions, the partial neutralization of multiply charged anions of oligodeoxyadenylic acid (d(pA)3) by reaction with discharge-generated cations, the partial neutralization of bovine A-chain insulin anions by reaction with myoglobin [M+nH](n+) ions, and the reaction of multiply protonated melittin with discharge-generated cations. The cation-anion reactions generally resulted in a shift to lower charge (higher mass-to-charge ratio) in the products' charge state distributions and the transfer of solvent molecules to the macromolecule products. Multiply protonated melittin was detected in a less highly solvated state with the positive discharge in operation.

  13. Study on the inclusion complexes of cyclodextrin and sulphonated azo dyes by electrospray ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Zhang, Huarong; Chen, Gang; Wang, Ling; Ding, Lan; Tian, Yuan; Jin, Weiqun; Zhang, Hanqi

    2006-05-01

    The inclusion complexes of [alpha]-, [beta]-cyclodextrin ([alpha]-, [beta]-CD) and sulphonated azo dyes ligands (Orange II, Ponceau SX, Allura red AC and Tartrazine) were studied by electrospray ionization mass spectrometry (ESI-MS) and the dissociation constants (KD) of the inclusion complexes were determined. A new method to obtain the dissociation constants of CD-ligand inclusion complexes without curve fitting was developed. Once the total concentrations of CD and ligand have been known, KD can be calculated from the sum peak intensities of free CD and inclusion complex and the number of binding site can be obtained from the mass spectrum. Ponceau SX, Allura red AC and Tartrazine binding to [alpha]-CD form 1:1 inclusion complexes with KD values of 1.33 × 10-5 mol L-1, 4.85 × 10-6 mol L-1 and 7.47 × 10-5 mol L-1, respectively. The obtained KD values of the inclusion complexes of above-mentioned three sulphonated azo dyes ligands binding to [beta]-CD in turn are 3.93 × 10-6 mol L-1, 6.50 × 10-6 mol L-1 and 1.12 × 10-4 mol L-1, respectively. The 1:1 and 1:2 inclusion complexes are found in the systems of CD and Orange II. KD,1 and KD,2 of [alpha]-CD and Orange II inclusion complexes are 4.05 × 10-4 mol L-1 and 4.60 × 10-7 (mol L-1)2, respectively. 3.94 × 10-5 mol L-1 and 1.72 × 10-7 (mol L-1)2 are the KD,1 and KD,2 of [beta]-CD and Orange II inclusion complexes, respectively. The competition experiments were performed to validate the results obtained by one ligand. According to the proposed method, the KD values of inclusion complexes regardless of any stoichiometric relation of host and guest can be obtained.

  14. A comparative study of disinfection efficiency and regrowth control of microorganism in secondary wastewater effluent using UV, ozone, and ionizing irradiation process.

    PubMed

    Lee, O-Mi; Kim, Hyun Young; Park, Wooshin; Kim, Tae-Hun; Yu, Seungho

    2015-09-15

    Ionizing radiation technology was suggested as an alternative method to disinfection processes, such as chlorine, UV, and ozone. Although many studies have demonstrated the effectiveness of irradiation technology for microbial disinfection, there has been a lack of information on comparison studies of disinfection techniques and a regrowth of each treatment. In the present study, an ionizing radiation was investigated to inactivate microorganisms and to determine the critical dose to prevent the regrowth. As a result, it was observed that the disinfection efficiency using ionizing radiation was not affected by the seasonal changes of wastewater characteristics, such as temperature and turbidity. In terms of bacterial regrowth after disinfection, the ionizing radiation showed a significant resistance of regrowth, whereas, on-site UV treatment is influenced by the suspended solid, temperature, or precipitation. The electric power consumption was also compared for the economic feasibility of each technique at a given value of disinfection efficiency of 90% (1-log), showing 0.12, 36.80, and 96.53 Wh/(L/day) for ionizing radiation, ozone, and UV, respectively. The ionizing radiation requires two or three orders of magnitude lower power consumption than UV and ozone. Consequently, ionizing radiation can be applied as an effective and economical alternative technique to other conventional disinfection processes. Copyright © 2015 Elsevier B.V. All rights reserved.

  15. Non-hydrolytic formation of silica and polysilsesquioxane particles from alkoxysilane monomers with formic acid in toluene/tetrahydrofuran solutions

    NASA Astrophysics Data System (ADS)

    Boday, Dylan J.; Tolbert, Stephanie; Keller, Michael W.; Li, Zhe; Wertz, Jason T.; Muriithi, Beatrice; Loy, Douglas A.

    2014-03-01

    Silica and polysilsesquioxane particles are used as fillers in composites, catalyst supports, chromatographic separations media, and even as additives to cosmetics. The particles are generally prepared by hydrolysis and condensation of tetraalkoxysilanes and/or organotrialkoxysilanes, respectively, in aqueous alcohol solutions. In this study, we have discovered a new, non-aqueous approach to prepare silica and polysilsesquioxane particles. Spherical, nearly monodisperse, silica particles (600-6,000 nm) were prepared from the reaction of tetramethoxysilane with formic acid (4-8 equivalents) in toluene or toluene/tetrahydrofuran solutions. Polymerization of organotrialkoxysilanes with formic acid failed to afford particles, but bridged polysilsesquioxane particles were obtained from monomers with two trialkoxysilyl group attached to an organic-bridging group. The mild acidic conditions allowed particles to be prepared from monomers, such as bis(3-triethoxysilylpropyl)tetrasulfide, which are unstable to Stöber or base-catalyzed emulsion polymerization conditions. The bridged polysilsesquioxane particles were generally less spherical and more polydisperse than silica particles. Both silica and bridged polysilsesquioxane nanoparticles could be prepared in good yields at monomer concentrations considerably higher than used in Stöber or emulsion approaches.

  16. New MOF based on lithium tetrahydrofuran-2,3,4,5-tetracarboxylate: Its structure and conductivity behavior

    NASA Astrophysics Data System (ADS)

    Zima, Vitezslav; Patil, Deepak S.; Raja, Duraisamy Senthil; Chang, Ting-Guang; Lin, Chia-Her; Shimakawa, Koichi; Wagner, Tomas

    2014-09-01

    A novel metal-organic framework, [Li6(HTFTA)2(H2O)3]·3H2O (LiTFTA, H4TFTA is tetrahydrofuran-2,3,4,5-tetracarboxylic acid), has been synthesized under solvothermal conditions and its structure was determined by single-crystal X-ray diffraction studies. It has six different LiO4 tetrahedra which forms two kinds of tetranuclear clusters that are coordinated to the ligands and form an overall three-dimensional structure with channels running along the crystallographic a axis. Some of the carboxylate groups of the ligand moiety jut out into the channels and the channels are occupied by water molecules. The proton conductivity behavior of LiTFTA with respect to temperature and relative humidity was analyzed by our newly developed impedance data analysis method called a random-walk approach. The results were compared with the data obtained by an analysis using an equivalent electric circuit model. Based on the physical parameters obtained by the random-walk method and the known structure we suggested the mechanism of the proton conductivity in this material. The proton conduction proceeds most probably by a vehicle conduction mechanism which employs mainly water molecules of crystallization present in the channels of LiTFTA. The value of the diffusion coefficient increases with temperature whereas the number of charge carriers remains constant. On the other hand, both the number of charge carriers and diffusion coefficient increase with increasing relative humidity.

  17. The effect of tetrahydrofuran on the enzymatic activity and microbial community in activated sludge from a sequencing batch reactor.

    PubMed

    Yao, Yanlai; Lu, Zhenmei; Min, Hang; Gao, Haichun; Zhu, Fengxiang

    2012-01-01

    Tetrahydrofuran (THF) is a toxic and carcinogenic compound that is commonly released from pharmaceutical, chemical and related industry wastewater. Currently, the effects of THF contamination on wastewater are unknown and a better understanding of THF toxicity toward biological processes in wastewater treatment is critical. In this study, we firstly investigated the toxic effects of THF on enzymatic activity and the microbial diversity in activated sludge from a sequencing batch reactor during long-term exposure to 10 mM THF. The activity of five enzymes (catalase, dehydrogenase, urease, phosphatase and protease) was remarkably decreased in the presence of 10 mM THF during a period of 85 days. Of these five affected enzymes, dehydrogenase activity was close to detection level limits and was nearly completely inhibited. Analysis of the microbial community demonstrated that THF, at a concentration of 10 mM, altered the distribution of microbes within the community and significantly decreased microbial diversity during long-term contamination, according to denaturing gradient gel electrophoresis (DGGE) analysis. The fraction of Actinobacteria increased in the community, while the fraction of Proteobacteria significantly decreased after THF exposure.

  18. The effect of air cavity size in cylindrical ionization chambers on the measurements in high-energy radiotherapy photon beams—an experimental study

    NASA Astrophysics Data System (ADS)

    Swanpalmer, John; Johansson, Karl-Axel

    2012-07-01

    The present investigation is a continuation of a previous study on the effect of the diameter of the air cavity in cylindrical ionization chambers on perturbation correction factors. Measurements were made using high-energy radiotherapy photon beams (4, 6 and 15 MV) in a water phantom. Two different pairs of cylindrical ionization chambers were used. The chambers in each pair had identical materials and construction but different air cavity diameters. The same methods were employed as in our previous investigation. The diameter of the air cavity in cylindrical ionization chambers influences the mass ionization (the measured ionization expressed per unit mass of air in the chamber air cavity) at the depth where the maximum ionization is observed and a normalization at this depth is therefore not correct. The corrections obtained at depths of 50 and 100 mm in the phantom showed that the air cavity diameter in cylindrical ionization chambers has a greater effect on the perturbation effects than the photon beam quality. The corrections found at depths of 50 and 100 mm are smaller than those currently used in dosimetry protocols.

  19. Unusual under-threshold ionization of neon clusters studied by ion spectroscopy

    NASA Astrophysics Data System (ADS)

    Nagaya, K.; Sugishima, A.; Iwayama, H.; Murakami, H.; Yao, M.; Fukuzawa, H.; Liu, X.-J.; Motomura, K.; Ueda, K.; Saito, N.; Foucar, L.; Rudenko, A.; Kurka, M.; Kühnel, K.-U.; Ullrich, J.; Czasch, A.; Dörner, R.; Feifel, R.; Nagasono, M.; Higashiya, A.; Yabashi, M.; Ishikawa, T.; Togashi, T.; Kimura, H.; Ohashi, H.

    2013-08-01

    We carried out time-of-flight mass spectrometry for neon clusters that were exposed to intense free electron laser pulses with the wavelength of 62 nm, which induce optical transition from the ground state (2s2 2p6) to an excited state (2s2 2p5 nl ) in the Ne atoms. In contrast to Ne+ ions produced by two-photon absorption from isolated Ne atoms, the Ne+ ion yield from Ne clusters shows a linear dependence on the laser intensity (I). We discuss the ionization mechanisms which give the linear behaviour with respect to I and expected features in the electron emission spectrum.

  20. Status of Studies of Achromat-based 6D Ionization Cooling Rings for Muons

    SciTech Connect

    Ding, X.; Kirk, H.; Cline, D.; Garren, A.A.; Berg, J.S.

    2011-09-04

    Six dimensional ionization cooling of muons is needed to achieve the necessary luminosity for a muon collider. If that cooling could occur over multiple turns in a closed ring, there would be significant cost savings over a single-pass cooling channel. We report on the status of a cooling ring with achromatic arcs. The achromatic design permits the design to easily switch between a closed ring and a snaking geometry on injection or extraction from the ring. The ring is designed with sufficient space in each superperiod for injection and extraction magnets. We describe the ring's lattice design, performance, and injection/extraction requirements.

  1. Inosine octamer stabilized by alkali earth metal cations - as studied by electrospray ionization mass spectrometry.

    PubMed

    Frańska, Magdalena

    2014-01-01

    By using electrospray ionization mass spectrometry, inosine was found to be able to form an octamer stabilized by alkali earth metal cation, namely Ca(2+), Sr(2+) and Ba(2+), of which the most stable is that stabilized by Ca(2+) (ion [I8+Ca](2+)). It was established that 9-methylhypoxanthine (M) did not form an analogical octamer, since ion [M8+Ca](2+) was not detected. On the other hand, 9-methylhypoxanthine can form "mixed" octamers together with inosine (ions [InMm+Ca](2+), n + m = 8, were detected).

  2. Study of Simvastatin Self-Association Using Electrospray-Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Vetrova, E. V.; Lekar, A. V.; Filonova, O. V.; Borisenko, S. N.; Maksimenko, E. V.; Borisenko, N. I.

    2015-07-01

    Self-association of simvastatin, which is widely used to treat coronary heart disease, was investigated using electrospray-ionization mass spectrometry. Formation of simvastatin self-associates in various solvents was demonstrated using mass spectrometry. Solvation effects were shown to play a special role in the formation of the self-associates. Self-associates containing from two to fi ve simvastatin molecules were detected in mass spectra of an aqueous MeOH (20%) solution of simvastatin. The formation of simvastatin self-associates could compete with the complexation of supramolecular structures during the synthesis of new generation drugs.

  3. Vibrations of pyrazine and its ion as studied by threshold ionization spectroscopy

    SciTech Connect

    Zhu, L.; Johnson, P. )

    1993-08-15

    The pump--probe threshold ionization photoelectron spectra of pyrazine have been recorded using nine different vibrations of [ital S][sub 1] as intermediate resonances. The extensive vibrational structure in these spectra of the ionic ground state have enabled the measurement of 12 of its vibrational frequencies and their assignments. Three new vibrational assignments of [ital S][sub 1] are also made. MP2/6-31G* calculations of the vibrational frequencies of the neutral ground, [ital S][sub 1], and the ionic ground state are compared with the experimental values, finding that certain vibrations of [ital S][sub 1] and the ion which engage in extensive vibronic coupling are not properly determined by the calculated force field. Most vibrational frequencies are accurately reproduced, however. Variations in the complexity of the threshold ionization spectra with the level of [ital S][sub 1] excitation indicate that internal vibrational relaxation is taking place at a very low energy in that state, possibly involving vibronic interactions and mixing with the triplet manifold.

  4. Potential Energy Surfaces of Core-Hole and Shake-Up States for Dissociative Ionization Studies.

    PubMed

    Corral, Inés; González-Vázquez, Jesús; Martín, Fernando

    2017-04-11

    The theoretical description of core-hole and core-hole excited (shake-up) states resulting from the interaction of a molecule with X-ray free-electron lasers, attosecond pulses, and synchrotron radiation is a challenging task, as these states lie in the ionization continuum and, therefore, are subject to variational collapse. Although much effort has been devoted in the past to describe core-hole states in the Franck-Condon (FC) region, very few attempts, even less for shake-up states, have been reported near the dissociation threshold, where multistate degeneracy introduces additional complications. Knowledge of the whole potential energy surface (PES) is, however, essential when dissociative ionization resulting from the interaction with XUV or X-ray light occurs. In this work, we gauge the accuracy of two widely used multiconfigurational methods, CASSCF and MRCI, to obtain the potential energy curves of core-hole states of CO, N2, and the small polyatomic molecule BF3, from the FC region up to the dissociation limit, and show that CASSCF in combination with a triple-ζ basis set provides a very reasonable compromise between accuracy and computational cost to correctly describe core-hole and shake-up states in the entire PES. Besides providing the vibrational spectroscopic constants associated with these states, we also analyze the corresponding bonding and dissociation properties, which, in some cases, are counterintuitive and significantly different from those of bound states.

  5. Desorption chemical ionization and fast atom bombardment mass spectrometric studies of the glucuronide metabolites of doxylamine.

    PubMed

    Lay, J O; Korfmacher, W A; Miller, D W; Siitonen, P; Holder, C L; Gosnell, A B

    1986-11-01

    Three glucuronide metabolites of doxylamine succinate were collected in a single fraction using high-performance liquid chromatography (HPLC) from the urine of dosed male Fischer 344 rats. The metabolites were then separated using an additional HPLC step into fractions containing predominantly a single glucuronide metabolite. Analysis of the metabolites by methane and ammonia desorption chemical ionization, with and without derivatization, revealed fragment ions suggestive of a hydroxylated doxylamine moiety. Identification of the metabolites as glucuronides of doxylamine, desmethyldoxylamine and didesmethyldoxylamine was accomplished, based on determination of the molecular weight and exact mass of each metabolite using fast atom bombardment (FAB) ionization. This assignment was confirmed by the fragmentation observed in FAB mass spectrometric and tandem mass spectrometric experiments. Para-substitution of the glucuronide on the phenyl moiety was observed by 500-MHz nuclear magnetic resonance (NMR) spectrometry. A fraction containing all three glucuronide metabolites, after a single stage of HPLC separation, was also analysed by FAB mass spectrometry, and the proton- and potassium-containing quasimolecular ions for all three metabolites were observed.

  6. Atmospheric Ionization Measurements

    NASA Astrophysics Data System (ADS)

    Slack, Thomas; Mayes, Riley

    2015-04-01

    The measurement of atmospheric ionization is a largely unexplored science that potentially holds the key to better understanding many different geophysical phenomena through this new and valuable source of data. Through the LaACES program, which is funded by NASA through the Louisiana Space Consortium, students at Loyola University New Orleans have pursued the goal of measuring high altitude ionization for nearly three years, and were the first to successfully collect ionization data at altitudes over 30,000 feet using a scientific weather balloon flown from the NASA Columbia Scientific Ballooning Facility in Palestine, TX. In order to measure atmospheric ionization, the science team uses a lightweight and highly customized sensor known as a Gerdien condenser. Among other branches of science the data is already being used for, such as the study of aerosol pollution levels in the atmosphere, the data may also be useful in meteorology and seismology. Ionization data might provide another variable with which to predict weather or seismic activity more accurately and further in advance. Thomas Slack and Riley Mayes have served as project managers for the experiment, and have extensive knowledge of the experiment from the ground up. LaSPACE Louisiana Space Consortium.

  7. Model study of modern oil-based paint media by triacylglycerol profiling in positive and negative ionization modes.

    PubMed

    Degano, Ilaria; La Nasa, Jacopo; Ghelardi, Elisa; Modugno, Francesca; Colombini, Maria Perla

    2016-12-01

    Lipid binders have traditionally been determined in paintings by using gas chromatography/mass spectrometry (GC/MS) to identify the characteristic profiles and ratios of fatty acids . However, the presence of mixtures in contemporary and modern oil paints makes the GC/MS determination of fatty acids insufficient to fully characterize the lipid binding media. In this study we prove that triacylglycerol (TAG) profiling by high-performance liquid chromatography with high-resolution tandem mass spectrometry, using ESI in positive and negative ionization modes is highly effective. We exploited this analytical approach to study the curing and degradation processes undergone by six plant oils used in the formulation of media in modern paints, using both natural and artificial ageing experiments. We believe that is the first time that a negative ionization mode has been applied for this purpose and that a survey with HPLC-ESI-Q-ToF has been carried out to study the ageing kinetics of plant oils. TAG profiling enabled us to study the evolution over time of the constituents of modern oils, with respect to curing and ageing. The data analyzed in this study demonstrate that our approach is efficient to study the oxidation of TAGs during ageing. The data also improve current knowledge on the properties of vegetable oils, which could lead to the development of new paint materials and conservation treatments for modern and contemporary works of art.

  8. Time Resolved Studies of Interfacial Reactions of Ozone with Pulmonary Phospholipid Surfactants Using Field Induced Droplet Ionization Mass Spectrometry

    PubMed Central

    Kim, Hugh I.; Kim, Hyungjun; Shin, Young Shik; Beegle, Luther W.; Goddard, William A.; Heath, James R.; Kanik, Isik; Beauchamp, J. L.

    2013-01-01

    Field induced droplet ionization mass spectrometry (FIDI-MS) comprises a soft ionization method to sample ions from the surface of microliter droplets. A pulsed electric field stretches neutral droplets until they develop dual Taylor cones, emitting streams of positively and negatively charged submicrometer droplets in opposite directions, with the desired polarity being directed into a mass spectrometer for analysis. This methodology is employed to study the heterogeneous ozonolysis of 1-palmitoyl-2-oleoyl-sn-phosphatidylglycerol (POPG) at the air–liquid interface in negative ion mode using FIDI mass spectrometry. Our results demonstrate unique characteristics of the heterogeneous reactions at the air–liquid interface. We observe the hydroxyhydroperoxide and the secondary ozonide as major products of POPG ozonolysis in the FIDI-MS spectra. These products are metastable and difficult to observe in the bulk phase, using standard electrospray ionization (ESI) for mass spectrometric analysis. We also present studies of the heterogeneous ozonolysis of a mixture of saturated and unsaturated phospholipids at the air–liquid interface. A mixture of the saturated phospholipid 1,2-dipalmitoyl-sn-phosphatidylglycerol (DPPG) and unsaturated POPG is investigated in negative ion mode using FIDI-MS while a mixture of 1,2-dipalmitoyl-sn-phosphatidylcholine (DPPC) and 1-stearoyl-2-oleoyl-sn-phosphatidylcholine (SOPC) surfactant is studied in positive ion mode. In both cases FIDI-MS shows the saturated and unsaturated pulmonary surfactants form a mixed interfacial layer. Only the unsaturated phospholipid reacts with ozone, forming products that are more hydrophilic than the saturated phospholipid. With extensive ozonolysis only the saturated phospholipid remains at the droplet surface. Combining these experimental observations with the results of computational analysis provides an improved understanding of the interfacial structure and chemistry of a surfactant layer system

  9. Time resolved studies of interfacial reactions of ozone with pulmonary phospholipid surfactants using field induced droplet ionization mass spectrometry.

    PubMed

    Kim, Hugh I; Kim, Hyungjun; Shin, Young Shik; Beegle, Luther W; Goddard, William A; Heath, James R; Kanik, Isik; Beauchamp, J L

    2010-07-29

    Field induced droplet ionization mass spectrometry (FIDI-MS) comprises a soft ionization method to sample ions from the surface of microliter droplets. A pulsed electric field stretches neutral droplets until they develop dual Taylor cones, emitting streams of positively and negatively charged submicrometer droplets in opposite directions, with the desired polarity being directed into a mass spectrometer for analysis. This methodology is employed to study the heterogeneous ozonolysis of 1-palmitoyl-2-oleoyl-sn-phosphatidylglycerol (POPG) at the air-liquid interface in negative ion mode using FIDI mass spectrometry. Our results demonstrate unique characteristics of the heterogeneous reactions at the air-liquid interface. We observe the hydroxyhydroperoxide and the secondary ozonide as major products of POPG ozonolysis in the FIDI-MS spectra. These products are metastable and difficult to observe in the bulk phase, using standard electrospray ionization (ESI) for mass spectrometric analysis. We also present studies of the heterogeneous ozonolysis of a mixture of saturated and unsaturated phospholipids at the air-liquid interface. A mixture of the saturated phospholipid 1,2-dipalmitoyl-sn-phosphatidylglycerol (DPPG) and unsaturated POPG is investigated in negative ion mode using FIDI-MS while a mixture of 1,2-dipalmitoyl-sn-phosphatidylcholine (DPPC) and 1-stearoyl-2-oleoyl-sn-phosphatidylcholine (SOPC) surfactant is studied in positive ion mode. In both cases FIDI-MS shows the saturated and unsaturated pulmonary surfactants form a mixed interfacial layer. Only the unsaturated phospholipid reacts with ozone, forming products that are more hydrophilic than the saturated phospholipid. With extensive ozonolysis only the saturated phospholipid remains at the droplet surface. Combining these experimental observations with the results of computational analysis provides an improved understanding of the interfacial structure and chemistry of a surfactant layer system when

  10. An efficient and economical process for lignin depolymerization in biomass-derived solvent tetrahydrofuran.

    PubMed

    Long, Jinxing; Zhang, Qi; Wang, Tiejun; Zhang, Xinghua; Xu, Ying; Ma, Longlong

    2014-02-01

    The depolymerization of renewable lignin for phenolic monomer, a versatile biochemical and precursor for biofuel, has attracted increasing attention. Here, an efficient base-catalyzed depolymerization process for this natural aromatic polymer is presented with cheap industrial solid alkali MgO and biomass-derived solvent tetrahydrofuran (THF). Results showed that more than 13.2% of phenolic monomers were obtained under 250°C for 15 min, because of the excellent lignin dissolution of THF and its promotion effect on the catalytic activity of MgO. Furthermore, comparison characterization on the raw material, products and residual solid using elemental analysis, FT-IR, TG-DSC, Py-GC-MS and chemo-physical absorption and desorption demonstrated that this base-catalyzed process can inhibit char formation significantly. Whereas, the fact that thermal repolymerization of oligomer on the pore and surface of catalyst resulting in the declination of the catalytic performance is responsible for the residue formation.

  11. The role of electron-impact vibrational excitation in electron transport through gaseous tetrahydrofuran

    SciTech Connect

    Duque, H. V.; Do, T. P. T.; Konovalov, D. A.; White, R. D.; Brunger, M. J. E-mail: darryl.jones@flinders.edu.au; Jones, D. B. E-mail: darryl.jones@flinders.edu.au

    2015-03-28

    In this paper, we report newly derived integral cross sections (ICSs) for electron impact vibrational excitation of tetrahydrofuran (THF) at intermediate impact energies. These cross sections extend the currently available data from 20 to 50 eV. Further, they indicate that the previously recommended THF ICS set [Garland et al., Phys. Rev. A 88, 062712 (2013)] underestimated the strength of the electron-impact vibrational excitation processes. Thus, that recommended vibrational cross section set is revised to address those deficiencies. Electron swarm transport properties were calculated with the amended vibrational cross section set, to quantify the role of electron-driven vibrational excitation in describing the macroscopic swarm phenomena. Here, significant differences of up to 17% in the transport coefficients were observed between the calculations performed using the original and revised cross section sets for vibrational excitation.

  12. Stereospecific Cross-Coupling Reactions of Aryl-Substituted Tetrahydrofurans, Tetrahydropyrans, and Lactones

    PubMed Central

    2015-01-01

    The stereospecific ring-opening of O-heterocycles to provide acyclic alcohols and carboxylic acids with controlled formation of a new C–C bond is reported. These reactions provide new methods for synthesis of acyclic polyketide analogs with complex stereochemical arrays. Stereoselective synthesis of the cyclic template is utilized to control relative configuration; subsequent stereospecific nickel-catalyzed ring-opening affords the acyclic product. Aryl-substituted tetrahydrofurans and tetrahydropyrans undergo nickel-catalyzed Kumada-type coupling with a range of Grignard reagents to furnish acyclic alcohols with high diastereoselectivity. Enantioenriched lactones undergo Negishi-type cross-coupling with dimethylzinc to afford enantioenriched carboxylic acids. Application in a two-step enantioselective synthesis of an anti-dyslipidemia agent is demonstrated. PMID:25308512

  13. Distinctive manifestations of segmental motion in amorphous poly(tetrahydrofuran) and polyisobutylene

    SciTech Connect

    Santangelo, P.G.; Ngai, K.L.; Roland, C.M. )

    1993-05-24

    Polyisobutylene (PIB) and poly(tetrahydrofuran) (PTHF) exhibit segmental relaxation behavior that is distinctly different from that found for other amorphous polymers. These unusual properties include a segmental relaxation dispersion that is much broader when measured mechanically than as seen by other spectroscopic techniques, a relative insensitivity of the segmental relaxation time to temperature, a small steepness index, and an absence of encroachment of the segmental modes in time scale toward the Rouse region as temperature is lowered. It is proposed herein that these phenomena are the result of the very low extent to which segmental relaxation in PIB and PTHF is constrained by nonbonded neighboring segments. This weak intermolecular coupling, deduced from quasi-elastic neutron scattering measurements, solid-state NMR spectroscopy, and the temperature dependence of the segmental relaxation time, arises from the smooth, symmetric, and flexible structure of the two polymers.

  14. False Results Caused by Solvent Impurity in Tetrahydrofuran for MALDI TOF MS Analysis of Amines

    NASA Astrophysics Data System (ADS)

    Lou, Xianwen; Leenders, Christianus M. A.; van Onzen, Arthur H. A. M.; Bovee, Ralf A. A.; van Dongen, Joost L. J.; Vekemans, Jef A. J. M.; Meijer, E. W.

    2013-11-01

    Tetrahydrofuran (THF) is one of the most frequently used solvents in the MALDI TOF MS analysis of synthetic compounds. However, it should be used with caution because a trace amount of 4-hydroxybutanal (HBA) might be generated and accumulated in THF during storage. Since only a tiny amount of analytes is required in MALDI MS measurements, a trace amount of HBA might have a significant effect on the MS results. It was found that HBA will quickly react with primary and secondary amino compounds, leading to false results about the sample composition with an extra series of ions with additional mass of 70 Da in between. The formation of HBA can be inhibited by butylated hydroxytoluene (BHT) antioxidant. Therefore, when THF is required as the solvent for sample preparation, it is strongly recommended to use a BHT-stabilized one, at least for the analysis of compounds with amino groups.

  15. On the hydrogen bonding between N-methylformamide and acetone and tetrahydrofuran

    NASA Astrophysics Data System (ADS)

    Almeida, Glauco G.; Borges, Alexandre; Cordeiro, João M. M.

    2014-04-01

    Liquid mixtures of N-methylformamide (NMF)-acetone (ACT) and NMF-tetrahydrofuran (THF) 20 mol% NMF have been investigated using Monte Carlo simulations, aiming to obtain new details on the hydrogen bonding donation of the peptide bond in non-aqueous media. There are strong evidences of the H-bonding between NMF and each of the solvents, but the results indicate significant differences between the H-bond interactions in each mixture. THF solvates better the amide than ACT. The NMF-THF H-bonds are more directed and the structure of the solvation shell is much more ordered in the NMF-THF mixture than in the NMF-ACT one.

  16. A study of the effects of therapeutic doses of ionizing radiation in vitro on Lactobacillus isolates originating from the vagina - a pilot study.

    PubMed

    Gosiewski, Tomasz; Mróz, Tomasz; Ochońska, Dorota; Pabian, Wojciech; Bulanda, Malgorzata; Brzychczy-Wloch, Monika

    2016-05-31

    Ionizing radiation is used as a therapeutic option in the treatment of certain neoplastic lesions located, among others, in the pelvic region. The therapeutic doses of radiation employed often result in adverse effects manifesting themselves primarily in the form of genital tract infections in patients or diarrhea. The data available in the literature indicate disorders in the microbial ecosystem caused by ionizing radiation, which leads to the problems mentioned above. In the present study, we examined the influence of ionizing radiation on 52 selected strains of bacteria: Lactobacillus crispatus, L. fermentum, L. plantarum, L. reuteri, L. acidophilus L. amylovorus, L. casei, L. helveticus, L. paracasei, L. rhamnosus, L. salivarius and L. gasseri. This collection of Lactobacillus bacteria isolates of various species, obtained from the genital tract and gastrointestinal tract of healthy women, was tested for resistance to therapeutic doses of ionizing radiation. The species studied, were isolated from the genital tract (n = 30) and from the anus (n = 22) of healthy pregnant women. Three doses of 3 Gy (fractionated dose) and 50 Gy (total dose of the whole radiotherapy cycle) were applied. The greatest differences in survival of the tested strains in comparison to the control group (not subjected to radiation) were observed at the dose of 50 Gy. However, the results were not statistically significant. Survival decrease to zero was not demonstrated for any of the tested strains. Therapeutic doses of radiation do not affect the Lactobacillus bacteria significantly.

  17. Sonic and resistivity measurements on Berea sandstone containing tetrahydrofuran hydrates: a possible analogue to natural-gas-hydrate deposits. [Tetrahydrofuran hydrates

    SciTech Connect

    Pearson, C.; Murphy, J.; Halleck, P.; Hermes, R.; Mathews, M.

    1983-01-01

    Deposits of natural gas hydrates exist in arctic sedimentary basins and in marine sediments on continental slopes and rises. However, the physical properties of such sediments are largely unknown. In this paper, we report laboratory sonic and resistivity measurements on Berea sandstone cores saturated with a stoichiometric mixture of tetrahydrofuran (THF) and water. We used THF as the guest species rather than methane or propane gas because THF can be mixed with water to form a solution containing proportions of the proper stoichiometric THF and water. Because neither methane nor propane is soluble in water, mixing the guest species with water sufficiently to form solid hydrate is difficult. Because THF solutions form hydrates readily at atmospheric pressure it is an excellent experimental analogue to natural gas hydrates. Hydrate formation increased the sonic P-wave velocities from a room temperature value of 2.5 km/s to 4.5 km/s at -5/sup 0/C when the pores were nearly filled with hydrates. Lowering the temperature below -5/sup 0/C did not appreciably change the velocity however. In contrast, the electrical resistivity increases nearly two orders of magnitude upon hydrate formation and continues to increase more slowly as the temperature is further decreased. In all cases the resistivities are nearly frequency independent to 30 kHz and the loss tangents are high, always greater than 5. The dielectric loss shows a linear decrease with frequency suggesting that ionic conduction through a brine phase dominates at all frequencies, even when the pores are nearly filled with hydrates. We find that the resistivities are strongly a function of the dissolved salt content of the pore water. Pore water salinity also influences the sonic velocity, but this effect is much smaller and only important near the hydrate formation temperature.

  18. Micellar versus hydro-organic mobile phases for retention-hydrophobicity relationship studies with ionizable diuretics and an anionic surfactant.

    PubMed

    Ruiz-Angel, M J; Carda-Broch, S; García-Alvarez-Coque, M C; Berthod, A

    2004-03-19

    Logarithm of retention factors (log k) of a group of 14 ionizable diuretics were correlated with the molecular (log P o/w) and apparent (log P(app)) octanol-water partition coefficients. The compounds were chromatographed using aqueous-organic (reversed-phase liquid chromatography, RPLC) and micellar-organic mobile phases (micellar liquid chromatography, MLC) with the anionic surfactant sodium dodecyl sulfate (SDS), in the pH range 3-7, and a conventional octadecylsilane column. Acetonitrile was used as the organic modifier in both modes. The quality of the correlations obtained for log P(app) at varying ionization degree confirms that this correction is required in the aqueous-organic mixtures. The correlation is less improved with SDS micellar media because the acid-base equilibriums are shifted towards higher pH values for acidic compounds. In micellar chromatography, an electrostatic interaction with charged solutes is added to hydrophobic forces; consequently, different correlations should be established for neutral and acidic compounds, and for basic compounds. Correlations between log k and the isocratic descriptors log k(w), log k(wm) (extrapolated retention to pure water in the aqueous-organic and micellar-organic systems, respectively), and psi0 (extrapolated mobile phase composition giving a k = 1 retention factor or twice the dead time), and between these descriptors and log P(app) were also satisfactory, although poorer than those between log k and log P(app) due to the extrapolation. The study shows that, in the particular case of the ionizable diuretics studied, classical RPLC gives better results than MLC with SDS in the retention hydrophobicity correlations.

  19. A simple assay for the study of human hair follicle damage induced by ionizing irradiation.

    PubMed

    Poeggeler, Burkhard; Bodó, Enikö; Nadrowitz, Roger; Dunst, Juergen; Paus, Ralf

    2010-08-01

    Due to its rapidly proliferating matrix keratinocytes, the hair follicle is highly sensitive to ionizing irradiation (IR)-induced skin damage and thus an instructive and clinically relevant model organ for investigating the effects of IR on rapidly dividing epithelial-mesenchymal interaction systems. Here, we have assessed the impact of IR on organ-cultured human scalp hair follicles. We show that IR significantly inhibits the proliferation and induces apoptosis of hair follicle matrix keratinocytes, disrupts normal hair follicle pigmentation, and upregulates a number of quantitative toxicity and viability markers (oxidative stress indicators, DNA oxidative damage, LDH release). This introduces human hair follicle organ culture as an excellent novel research tool for radiobiology and invites exploitation as a preclinical assay system for testing candidate radioprotectants.

  20. Ab initio Study on Ionization Energies of 3-Amino-1-propanol

    NASA Astrophysics Data System (ADS)

    Wang, Ke-dong; Jia, Ying-bin; Lai, Zhen-jiang; Liu, Yu-fang

    2011-06-01

    Fourteen conformers of 3-amino-1-propanol as the minima on the potential energy surface are examined at the MP2/6-311++G** level. Their relative energies calculated at B3LYP, MP3 and MP4 levels of theory indicated that two most stable conformers display the intramolecular OH···N hydrogen bonds. The vertical ionization energies of these conformers calculated with ab initio electron propagator theory in the P3/aug-cc-pVTZ approximation are in agreement with experimental data from photoelectron spectroscopy. Natural bond orbital analyses were used to explain the differences of IEs of the highest occupied molecular ortibal of conformers. Combined with statistical mechanics principles, conformational distributions at various temperatures are obtained and the temperature dependence of photoelectron spectra is interpreted.

  1. Spectroscopic study of ionizing and recombining plasma in a stationary plasma source

    NASA Astrophysics Data System (ADS)

    Namba, S.; Goto, M.; Tsuboi, H.; Oda, T.; Sato, K.

    2000-09-01

    A hot cathode, which is composed of La2O3-W needles, has been constructed and tested in a modified arc discharge source in order to produce a high-density plasma by large discharge current. No damage of needles was found after 100 h at a discharge current of 300 A. Characteristics of generated helium plasmas have been investigated by spectroscopic observations. The electron density has been found to be ≧2×1014cm-3 at a discharge current 100 A with this cathode. Experimental results were analyzed with calculations based on a collisional radiative model including an effect of radiation trapping. As a result, generated plasmas were shown to be classified into two groups by the pressure of neutral helium, that is, an ionizing plasma and recombining plasma. In low temperature recombining plasma, population inversions between He+ ion n=2 and the higher excited levels have been obtained.

  2. Experimental and theoretical fully differential study of coherence effects in ionization of He by proton impact

    NASA Astrophysics Data System (ADS)

    Schulz, Michael; Arthanayaka, Thusitha; Lamichhane, Basu; Hasan, Ahmad; Gurung, Sudip; Remolina, Juan; Borbely, Sandor; Jarai-Szabo, Ferenc; Nagy, Ladislau

    2016-09-01

    We have measured and calculated fully differential cross sections (FDCS) for ionization of He by 75 keV proton impact. Results were obtained for transverse projectile coherence lengths of 3.3 and 1.0 a.u. The coherence length is related to the maximum dimension of a diffracting object that can be coherently illuminated by the projectiles. In the calculation impact parameter dependent amplitudes a(b) are computed and multiplied by a wave packet of varying width, reflecting the coherence length, which describes the projectile. The scattering angle dependent transition amplitude is then obtained from a Fourier transform. Pronounced coherence effects observed in the data are qualitatively well reproduced by the calculation. Along with extensive data published already the present work therefore confirms the presence of such effects beyond reasonable doubt. Work supported by NSF Grant No. PHY-1401586.

  3. The Chandra X-Ray Observatory and its Role for the Study of Ionized Plasmas

    NASA Technical Reports Server (NTRS)

    Weisskopf, Martin C.

    2010-01-01

    NASA's Chandra X-Ray Observatory was launched in July of 1999. Featuring a 1000cm2-class X-ray telescope with sub-arcsecond angular resolution, the Observatory has observed targets from the solar system including the earth s moon, comets, and planets to the most distant galaxy clusters and active galactic nuclei. Capable of performing moderate energy resolution image-resolved spectroscopy using its CCD detectors, and high-resolution grating spectroscopy, the Observatory has produced, and continues to produce, valuable data and insights into the emission mechanisms of the ionized plasmas in which the X-rays originate. We present a brief overview of the Observatory to provide insight as to how to use it for your investigations. We also present an, admittedly brief and biased, overview of some of the results of investigations performed with Chandra that may be of interest to this audience.

  4. A parametric study of dissociation and ionization models at 12 km/sec

    NASA Technical Reports Server (NTRS)

    Mitcheltree, R. A.

    1991-01-01

    Thermochemical nonequilibrium-solution dependence on available models for the chemical reaction rates is examined. Solutions from the Kang and Dunn (1973) reaction-rate set, the Park rate set of 1987, and the Park rate set of 1991 are compared. The blunt-nosed, axisymmetric geometry considered is a 60-deg sphere cone with nose radius of 1.07 m and cicular aft skirt. The nonequilibrium test case is 12 km/sec entry into the earth's atmosphere at 80 km altitude. The model variations are implemented into the Langley aerothermodynamics upwind relaxation algorithm code. While variations in the reaction rates have no effect on the surface pressure distribution and little effect on the convective heating, the effect on degree of ionization and radiative heating can be a factor of three.

  5. Spectroscopy of neutral and ionized PAHs. From laboratory studies to astronomical observations

    NASA Technical Reports Server (NTRS)

    Salama, Farid

    2005-01-01

    Polycyclic Aromatic Hydrocarbons (PAHs) are an important and ubiquitous component of carbon-bearing materials in space. PAHs are the best-known candidates to account for the IR emission bands (UIR bands) and PAH spectral features are now being used as new probes of the ISM. PAHs are also thought to be among the carriers of the diffuse interstellar absorption bands (DIBs). In the model dealing with the interstellar spectral features, PAHs are present as a mixture of radicals, ions and neutral species. PAH ionization states reflect the ionization balance of the medium while PAH size, composition, and structure reflect the energetic and chemical history of the medium. A major challenge for laboratory astrochemistry is to reproduce (in a realistic way) the physical conditions that are associated with the emission and absorption interstellar zones. An extensive laboratory program has been developed at NASA Ames to assess the physical and chemical properties of PAHs in such environments and to describe how they influence the radiation and energy balance in space and the interstellar chemistry. PAHs, neutrals and ions, are expanded through a pulsed discharge nozzle (PDN) and probed with high-sensitivity cavity ringdown spectroscopy (CRDS). These laboratory experiments provide unique information on the spectra of free, cold large carbon molecules and ions in the gas phase from the ultraviolet and visible range to the near-infrared range. Intrinsic band profiles and band positions of cold gas-phase PAHs can now be measured with high-sensitivity spectroscopy and directly compared to the astronomical data. Preliminary conclusions from the comparison of the laboratory data with astronomical observations of interstellar and circumstellar environments will also be discussed.

  6. Photochemistry of limonene secondary organic aerosol studied with chemical ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Pan, Xiang

    Limonene is one of the most abundant monoterpenes in the atmosphere. Limonene easily reacts with gas-phase oxidants in air such as NO3, ozone and OH. Secondary organic aerosol (SOA) is formed when low vapor pressure products condense into particles. Chemicals in SOA particles can undergo further reactions with oxidants and with solar radiation that significantly change SOA composition over the course of several days. The goal of this work was to characterize radiation induced reaction in SOA. To perform experiments, we have designed and constructed an Atmospheric Pressure Chemical Ionization Mass Spectrometer (APCIMS) coupled to a photochemical cell containing SOA samples. In APCIMS, (H2O)nH 3O+ clusters are generated in a 63Ni source and react with gaseous organic analytes. Most organic chemicals are not fragmented by the ionization process. We have focused our attention on limonene SOA prepared in two different ways. The first type of SOA is produced by oxidation of limonene by ozone; and the second type of SOA is formed by the NO3-induced oxidation of limonene. They model the SOA formed under daytime and nighttime conditions, respectively. Ozone initiated oxidation is the most important chemical sink for limonene both indoors, where it is used for cleaning purposes, and outdoors. Terpenes are primarily oxidized by reactions with NO3 at night time. We generated limonene SOA under different ozone and limonene concentrations. The resulting SOA samples were exposed to wavelength-tunable radiation in the UV-Visible range between 270 nm and 630 nm. The results show that the photodegradation rates strongly depend on radiation wavelengths. Gas phase photodegradation products such as acetone, formaldehyde, acetaldehyde, and acetic acid were shown to have different production rates for SOA formed in different concentration conditions. Even for SOA prepared under the lowest concentrations, the SOA photodegradation was efficient. The conclusion is that exposure of SOA to

  7. Spectroscopy of neutral and ionized PAHs. From laboratory studies to astronomical observations

    NASA Technical Reports Server (NTRS)

    Salama, Farid

    2005-01-01

    Polycyclic Aromatic Hydrocarbons (PAHs) are an important and ubiquitous component of carbon-bearing materials in space. PAHs are the best-known candidates to account for the IR emission bands (UIR bands) and PAH spectral features are now being used as new probes of the ISM. PAHs are also thought to be among the carriers of the diffuse interstellar absorption bands (DIBs). In the model dealing with the interstellar spectral features, PAHs are present as a mixture of radicals, ions and neutral species. PAH ionization states reflect the ionization balance of the medium while PAH size, composition, and structure reflect the energetic and chemical history of the medium. A major challenge for laboratory astrochemistry is to reproduce (in a realistic way) the physical conditions that are associated with the emission and absorption interstellar zones. An extensive laboratory program has been developed at NASA Ames to assess the physical and chemical properties of PAHs in such environments and to describe how they influence the radiation and energy balance in space and the interstellar chemistry. PAHs, neutrals and ions, are expanded through a pulsed discharge nozzle (PDN) and probed with high-sensitivity cavity ringdown spectroscopy (CRDS). These laboratory experiments provide unique information on the spectra of free, cold large carbon molecules and ions in the gas phase from the ultraviolet and visible range to the near-infrared range. Intrinsic band profiles and band positions of cold gas-phase PAHs can now be measured with high-sensitivity spectroscopy and directly compared to the astronomical data. Preliminary conclusions from the comparison of the laboratory data with astronomical observations of interstellar and circumstellar environments will also be discussed.

  8. Studying interfacial reactions of cholesterol sulfate in an unsaturated phosphatidylglycerol layer with ozone using field induced droplet ionization mass spectrometry.

    PubMed

    Ko, Jae Yoon; Choi, Sun Mi; Rhee, Young Min; Beauchamp, J L; Kim, Hugh I

    2012-01-01

    Field-induced droplet ionization (FIDI) is a recently developed ionization technique that can transfer ions from the surface of microliter droplets to the gas phase intact. The air-liquid interfacial reactions of cholesterol sulfate (CholSO(4)) in a 1-palmitoyl-2-oleoyl-sn-phosphatidylglycerol (POPG) surfactant layer with ozone (O(3)) are investigated using field-induced droplet ionization mass spectrometry (FIDI-MS). Time-resolved studies of interfacial ozonolysis of CholSO(4) reveal that water plays an important role in forming oxygenated products. An epoxide derivative is observed as a major product of CholSO(4) oxidation in the FIDI-MS spectrum after exposure of the droplet to O(3) for 5 s. The abundance of the epoxide product then decreases with continued O(3) exposure as the finite number of water molecules at the air-liquid interface becomes exhausted. Competitive oxidation of CholSO(4) and POPG is observed when they are present together in a lipid surfactant layer at the air-liquid interface. Competitive reactions of CholSO(4) and POPG with O(3) suggest that CholSO(4) is present with POPG as a well-mixed interfacial layer. Compared with CholSO(4) and POPG alone, the overall ozonolysis rates of both CholSO(4) and POPG are reduced in a mixed layer, suggesting the double bonds of both molecules are shielded by additional hydrocarbons from one another. Molecular dynamics simulations of a monolayer comprising POPG and CholSO(4) correlate well with experimental observations and provide a detailed picture of the interactions between CholSO(4), lipids, and water molecules in the interfacial region. © American Society for Mass Spectrometry, 2011

  9. Single cell ionization by a laser trap: a preliminary study in measuring radiation dose and charge in BT20 breast carcinoma cells

    PubMed Central

    Kelley, Michele; Gao, Ying; Erenso, Daniel

    2016-01-01

    In this work, a preliminary study in the application of a laser trap for ionization of living carcinoma cells is presented. The study was conducted using BT20 breast carcinoma cells cultured and harvested in our laboratory. Each cell, for a total of 50 cells, was trapped and ionized by a high intensity infrared laser at 1064 nm. The threshold radiation dose and the resultant charge from the ionization for each cell were determined. With the laser trap serving as a radiation source, the cell underwent dielectric breakdown of the membrane. When this process occurs, the cell becomes highly charged and its dielectric susceptibility changes. The charge creates an increasing electrostatic force while the changing dielectric susceptibility diminishes the strength of the trapping force. Consequently, at some instant of time the cell gets ejected from the trap. The time inside the trap while the cell is being ionized, the intensity of the radiation, and the post ionization trajectory of the cell were used to determine the threshold radiation dose and the charge for each cell. The measurement of the charge vs ionization radiation dose at single cell level could be useful in the accuracy of radiotherapy as the individual charges can collectively create a strong enough electrical interaction to cause dielectric breakdown in other cells in a tumor. PMID:27699110

  10. Evaluation of a hydrophilic ionic liquid as a salting-out phase separation agent to a water-tetrahydrofuran homogeneous system for aqueous biphasic extraction separation.

    PubMed

    Hirayama, Naoki; Higo, Takaaki; Imura, Hisanori

    2012-01-01

    The use of a hydrophilic ionic liquid (IL), 1-butyl-3-methylimidazolium chloride (C(4)mimCl), as a salting-out phase separation agent to a water-tetrahydrofuran homogeneous system was studied for possible applications to novel aqueous biphasic extraction separation. The IL showed a salting-out phase-separation ability. Also, differences in the polarity between the formed two phases were smaller than that when using NaCl as a salting-out agent. This result suggested that C(4)mimCl remaining in water-rich phase acts not only as a salting-out agent, but also a component of a mixed-solvent. Possible uses of C(4)mimCl/NaCl mixed salting-out agent system were also discussed.

  11. Annonacin, a mono-tetrahydrofuran acetogenin, arrests cancer cells at the G1 phase and causes cytotoxicity in a Bax- and caspase-3-related pathway.

    PubMed

    Yuan, Shyng-Shiou F; Chang, Hsueh-Ling; Chen, Hsiao-Wen; Yeh, Yao-Tsung; Kao, Ying-Hsien; Lin, Kuei-Hsiang; Wu, Yang-Chang; Su, Jinu-Huang

    2003-05-09

    Annonaceous acetogenins are a group of potential anti-neoplastic agents isolated from Annonaceae plants. In this study, we purified annonacin, a cytotoxic mono-tetrahydrofuran acetogenin, from the seeds of Annona reticulata and analyzed its biological effects. Herein, we have shown that annonacin caused significant cell death in various cancer cell lines. T24 bladder cancer cells at the S phase were more vulnerable to the cytotoxicity of annonacin. Furthermore, annonacin activated p21 in a p53-independent manner and arrested T24 cells at the G1 phase. It also induced Bax expression, enhanced caspase-3 activity, and caused apoptotic cell death in T24 cells. In summary, these results suggest that annonacin is potentially a promising anti-cancer compound.

  12. Diastereoselective Synthesis of Highly Substituted Tetrahydrofurans by Pd-Catalyzed Tandem Oxidative Cyclization-Redox Relay Reactions Controlled by Intramolecular Hydrogen Bonding.

    PubMed

    Brooks, Joshua L; Xu, Liping; Wiest, Olaf; Tan, Derek S

    2017-01-06

    Palladium-catalyzed oxidative cyclization of alkenols provides a convenient entry into cyclic ethers but typically proceeds with little or no diastereoselectivity for cyclization of trisubstituted olefins to form tetrahydrofurans due to the similar energies of competing 5-membered transition-state conformations. Herein, a new variant of this reaction has been developed in which a PdCl2/1,4-benzoquinone catalyst system coupled with introduction of a hydrogen-bond acceptor in the substrate enhances both diastereoselectivity and reactivity. Cyclization occurs with 5-exo Markovnikov regioselectivity. Mechanistic and computational studies support an anti-oxypalladation pathway in which intramolecular hydrogen bonding increases the nucleophilicity of the alcohol and enforces conformational constraints that enhance diastereoselectivity. The cyclization is followed by a tandem redox-relay process that provides versatile side-chain functionalities for further derivatization.

  13. Reactivity of niobium and tantalum pentahalides with cyclic ethers and the isolation and characterization of intermediates in the polymerization of tetrahydrofuran.

    PubMed

    Marchetti, Fabio; Pampaloni, Guido; Zacchini, Stefano

    2008-01-07

    The complexes MX5(THF) (M = Nb, X = Cl, 2a; M = Ta, X = F, 2c, X = Cl, 2d) and [MX4(THF){O(CH2)4O(CH2)3CH2)}][MX6] (M = Nb, X = Cl, 3a; M = Ta, X = Cl, 3d, X = Br, 3e, X = I, 3f) result from reactions of MX5 with 0.5 and 1.5 equiv of THF, respectively. Compounds 3 contain the unprecedented 4-(tetrahydrofuran-1-ium)-butan-1-oxo ligand and are likely to play a role in the course of THF polymerization catalyzed by MX5. The addition of L (L = 2,5-dimethyltetrahydrofuran, tetrahydropyran, 1,4-dioxane) to MX5 results in the formation of the hexacoordinated complexes MX5(L). The molecular structures of 2d, 3d, and NbCl5(dioxane), 6a, have been ascertained by X-ray diffraction studies.

  14. High performance electrospray ionization mass spectrometry in the study of the noncovalent associations of proteins and DNA

    SciTech Connect

    Smith, R.D.; Hofstadler, S.A.; Bruce, J.A.

    1995-12-01

    The ability to study the non-covalent associations of biopolymers under near physiological conditions using electrospray ionization-mass spectrometry has opened new opportunities for the study of a range of crucial biological processes. The use of new instrumentation based upon Fourier transform ion cyclotron resonance mass spectrometry will also be presented, and shown to open new opportunities and applications based upon improved resolution, sensitivity, and extended multi-dimensional mass spectrometric capabilities. In this presentation, studies showing the broad utility of ESI-MS for studies of binding and stoichiometry of biomolecular structure and interactions will be presented. The conditions under which quantitative data can be obtained in such studies will be discussed. Systems described will include protein quaternary structure, protein-protein complexes of relevance to DNA repair, oligonucleotide duplexes and quadruplexes, and the interaction of smaller molecules with these biopolymers (e.g., protein inhibitors).

  15. Modelling studies of the conjugate-hemisphere differences in ionospheric ionization at equatorial anomaly latitudes

    NASA Astrophysics Data System (ADS)

    Balan, N.; Bailey, G. J.; Moffett, R. J.; Su, Y. Z.; Titheridge, J. E.

    1995-03-01

    The relative importance of the equatorial plasma fountain (caused by vertical E x B drift at the equator) and neutral winds in leading to the ionospheric variations at equatorial-anomaly latitudes, with particular emphasis on conjugate-hemisphere differences, is investigated using a plasmasphere model. Values of ionospheric electron content (IEC) and peak electron density (Nmax) computed at conjugate points in the magnetic latitude range 10-30 deg at longitude 158 deg W reproduce the observed seasonal, solar activity, and latitudinal variations of IEC and Nmax, including the conjugate-hemisphere differences. The model results show that the plasma fountain, in the absence of neutral winds, produces almost identical effects at conjugate points in all seasons; neutral winds cause conjugate-hemisphere differences by modulating the fountain and moving the ionospheres at the conjugate hemispheres to different altitudes. At equinox, the neutral winds, mainly the zonal wind, modulate the fountain to supply more ionization to the northern hemisphere during evening and night-time hours and, at the same time, cause smaller chemical loss in the southern hemisphere by raising the ionosphere. The gain of ionization through the reduction in chemical loss is greater than that supplied by the fountain and causes stronger premidnight enhancements in IEC and Nmax (with delayed peaks) in the southern hemisphere at all latitudes (10-30 deg). The same mechanism, but with the hemispheres of more flux and less chemical loss interchanged, causes stronger daytime IEC in the northern hemisphere at all latitudes. At solstice, the neutral winds, mainly the meriodional wind, modulate the fountain differently at different altitudes and latitudes with a general interhemispheric flow from the summer to the winter hemisphere at altitudes above the F-region peaks. The interhemispheric flow causes stronger premidnight enhancements in IEC and Nmax and stronger daytime Nmax in the winter hemisphere

  16. Results from a Pre-Ionization Study of a 30 kW RMF-FRC Experiment for Space Propulsion

    NASA Astrophysics Data System (ADS)

    Hill, Carrie; Uchizono, Nolan; Holmes, Michael

    2016-10-01

    Field-Reversed-Configuration (FRC) plasma thrusters are an attractive concept for in-space propulsion. These thrusters operate in a quasi-steady manner by expelling successive bursts of FRC plasmoids on the order of the neutral-gas refill rate. Pre-ionization (PI) of the seed gas is a challenge for these repetitive systems as the starting mix is a combination of the hot remnants from the recently-departed FRC and the cold refill gas. Pre-ionization of this mixture is critical to the RMF current drive and energy coupling of the system and therefore must be optimized to maximize performance. An empirical PI study was conducted on a 30-kW RMF-FRC benchtop experiment to examine how coil geometry and initial plasma distribution affects the plasmoid formation and acceleration processes. Three different inductively-coupled PI coil geometries were investigated. Their effectiveness was monitored by recording the downstream plasma velocity distribution, density, and energy coupling to the RMF antennas. The initial seed plasma created by these sources was also mapped in limited regions to compare the starting conditions for the FRC plasmoid in each case.

  17. RF Pre-Ionization to Create Faster, Hotter MHD-Driven Jets and Studies of Plasma Expansion Into a Vacuum

    NASA Astrophysics Data System (ADS)

    Chaplin, Vernon; Bellan, Paul

    2013-10-01

    We are studying MHD-driven jets relevant to astrophysical jets and fusion plasmas. Previous experiments at Caltech have focused on plasmas created by breaking down neutral gas using high voltage. The Paschen breakdown criterion governing this process sets an undesirable lower limit for the jet density. To overcome this constraint, we have developed a pre-ionization system powered by a pulsed, battery-powered, 3 kW 13.56 MHz RF amplifier. Pre-ionization of plasma in a tube behind the jet experiment's center electrode is expected to enable the formation of lower density, hotter, faster jets. Thus far, argon jets have been created with v >30 km/s, twice as fast as was previously achievable. The expansion of the RF plasma into the chamber prior to the discharge of the main capacitor bank involves surprisingly complex dynamics. There are two phases: initially plasma expansion along the background magnetic field is inhibited and the primary source of emission away from the RF antenna appears to be neutral atoms excited by fast electrons or photons from the RF source. At a later time, either before or after RF turn-off depending on the magnetic field configuration, a relatively high density (ne >1018 m-3) , cold (Te < 0.5 eV) cloud of plasma emerges from the source tube.

  18. Fragmentation studies and electrospray ionization mass spectrometry of lapachol: protonated, deprotonated and cationized species.

    PubMed

    Vessecchi, Ricardo; Emery, Flavio S; Galembeck, Sérgio E; Lopes, Norberto P

    2010-07-30

    Electrospray ionization mass spectrometric analysis of lapachol (2-hydroxy-3-(3-methyl-2-butenyl)-1,4-naphthoquinone) was accomplished in order to elucidate the gas-phase dissociation reactions of this important biologically active natural product. The occurrence of protonated and cationized species in the positive mode and of deprotonated species in the negative mode was explored by means of collision-induced dissociation (CID) experiments. For the protonated molecule, the H(2)O and C(4)H(8) losses occur by two competitive channels. For the deprotonated molecule, the even-electron rule is not conserved, and the radicalar species are eliminated by formation of distonic anions. The fragmentation mechanism for each ion was suggested on the basis of computational thermochemistry. Atomic charges, relative energies, and frontier orbitals were employed aiming at a better understanding of the gas-phase reactivity of lapachol. Potential energy surfaces for fragmentation reactions were obtained by the B3LYP/6-31+G(d,p) model.

  19. Negative chemical ionization studied of human and food chain contamination with xenobiotic chemicals.

    PubMed Central

    Dougherty, R C; Whitaker, M J; Smith, L M; Stalling, D L; Kuehl, D W

    1980-01-01

    Negative chemical ionization mass spectrometry with a mixture of isobutane, methylene chloride, and oxygen as the reagent gas has been used to explore contamination of environmental substrates with xenobiotic chemicals. The substrates in question, fish tissue, human seminal plasma, and human adipose tissue, were cleaned up by one of the following three cleanup procedures: (1) continuous liquid-liquid extraction steam distillation; (2) gel-permeation chromatography; and (3) adsorption on activated carbon followed by elution with toluene. The third procedure was used only for the examination of planar polychlorinated aromatic hydrocarbons in environmental samples. Using these techniques, we have found evidence for contamination of fish samples with polychloronaphthalenes, polychlorostyrenes, polychlorobiphenyls, polychlorodibenzofurans, and polychlorodibenzodioxins among other chemicals. The polychlorodibenzodioxins appeared only in the spectra of extracts of fish obtained from the Tittabawassee River at Midland Michigan. The polychlorodibenzofuran ions appeared in NCI mass spectra of fish that were significantly contaminated (above 2 ppm) with polychlorobiphenyls. Toxic substances occurring in human seminal plasma included pentachlorophenol, hexachlorobenzene, DDT metabolites, and polychlorobiphenyls. We have investigated toxic substances in human seminal plasma because of the apparent decrease in sperm density in U.S. males over the last 30 years. Results of screening human adipose tissue for contamination with xenobiotic chemicals have been largely coincident with result of the EPA human monitoring program. Polychlorobiphenyls, DDT metabolites, nonachlor, and chlordane have appeared in most samples examined. Detection limits for all of these chemicals were of the order of 1 ppb. PMID:7428739

  20. Cluster model studies of anion and molecular specificities via electrospray ionization photoelectron spectroscopy

    DOE PAGES

    Wang, Xue -Bin

    2017-01-06

    Ion specificity, a widely observed macroscopic phenomenon in condensed phases and at interfaces, is essentially a fundamental chemical physical issue. We have been investigating such effects using cluster models in an “atom-by-atom” and “molecule-by-molecule” fashion not possible with condensed-phase methods. We use electrospray ionization (ESI) to generate molecular and ionic clusters to simulate key molecular entities involved in local binding regions, and characterize them employing negative ion photoelectron spectroscopy (NIPES). Inter- and intramolecular interactions and binding configurations are directly obtained as functions of cluster size and composition, providing insightful molecular-level description and characterization over the local active sites that playmore » crucial roles in determining solution chemistry and condensed phase phenomena. Finally, the topics covered in this article are relevant to a wide scope of research fields ranging from ion specific effects in electrolyte solutions, ion selectivity/recognition in normal functioning of life, to molecular specificity in aerosol particle formation, as well as in rational material design and synthesis.« less

  1. Density functional theory study on the ionization potentials and electron affinities of thymine-formamide complexes

    NASA Astrophysics Data System (ADS)

    Sun, Haitao; Tang, Ke; Li, Yanmin; Su, Chunfang; Zhou, Zhengyu; Wang, Zhizhong

    The effect of hydrogen bond interactions on ionization potentials (IPs) and electron affinities (EAs) of thymine-formamide complexes (T-F) have been investigated employing the density functional theory B3LYP at 6-311++G(d, p) basis set level. All complexes experience a geometrical change on either electron detachment or attachment, and the change might be facilitated or hindered according to the strength of the hydrogen-bonding interaction involved. The strength of hydrogen bonds presents an opposite changing trend on the two processes. A more important role that H-bonding interaction plays in the process of electron attachment than in the process of electron detachment can be seen by a comparison of the IPs and EAs of complexes with that of isolated thymine. Futhermore, the EAs of isolated thymine are in good agreement with the experimental values (AEA is 0.79 eV, VEA is -0.29 eV [Wetmore et al., Chem Phys Lett 2000, 322, 129]). The calculated total NPA charge distributions reveal that nearly all the negative charges locate on thymine monomer in the anions and even in the cationic states, there are a few negative charges on thymine monomer. An analysis of dissociation energies predicts the processes T-F+→ T++ F and T-F- → T- + F to be the most energetically favorable for T-F+ and T-F-, respectively. Content:text/plain; charset="UTF-8"

  2. Ionization and fragmentation of complex molecules studied with a density functional theory based approach

    NASA Astrophysics Data System (ADS)

    Kirchner, Tom

    2013-05-01

    Ion-impact induced ionization and fragmentation of complex molecules have important applications in many branches of science. If the molecule is H2O an obvious topic to address is the radiobiological relevance of these processes, e.g. in the context of hadron therapy, to name just one example. From a more fundamental physics viewpoint ion-molecule collision systems constitute interesting many-body systems, whose analysis poses challenges to both experimentalists and theorists. This talk will describe a theoretical approach to ion-molecule collisions, which is based on density functional theory to describe the nonperturbative electron dynamics. The basis generator method applied in the past successfully to ion-atom collisions is adapted to deal with the multi-center problem one faces when one considers molecular targets. Cross sections for single- and multiple-electron processes (capture and transfer to the continuum) are obtained directly from solving time-dependent Kohn-Sham-type orbital equations and using a Slater determinant based analysis. Fragmentation yields are predicted on the basis of a semi-phenomenological model which uses the calculated cross sections as input. Results will be presented for various ions impacting on water molecules in the energy range of 10-5000 keV/amu and compared with experimental data and previous theoretical calculations where available. First applications of the model to collisions involving CH4 molecules will also be discussed. This work has been supported by SHARCNET and NSERC Canada.

  3. Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry: Mechanistic Studies and Methods for Improving the Structural Identification of Carbohydrates

    PubMed Central

    Lai, Yin-Hung; Wang, Yi-Sheng

    2017-01-01

    Although matrix-assisted laser desorption/ionization (MALDI) mass spectrometry is one of the most widely used soft ionization methods for biomolecules, the lack of detailed understanding of ionization mechanisms restricts its application in the analysis of carbohydrates. Structural identification of carbohydrates achieved by MALDI mass spectrometry helps us to gain insights into biological functions and pathogenesis of disease. In this review, we highlight mechanistic details of MALDI, including both ionization and desorption. Strategies to improve the ion yield of carbohydrates are also reviewed. Furthermore, commonly used fragmentation methods to identify the structure are discussed. PMID:28959517

  4. Mechanism for the formation of gas-phase protonated alcohol-ether adducts by VUV laser ionization and density-functional calculations

    SciTech Connect

    Lam, Selay; Shi, Y.J.; Mosey, N.J.; Woo, T.K.; Lipson, R.H.

    2004-11-22

    The neutral vapors above liquid alcohol/ether mixtures (diethyl ether/methanol, diethyl ether/ethanol, tetrahydrofuran/methanol, and tetrahydrofuran/ethanol) were co-expanded with He in a supersonic jet, ionized with a 118-nm vacuum ultraviolet laser, and detected in a time-of-flight mass spectrometer. In each case, features attributed to protonated alcohol-ether dimers and protonated ether monomers were observed, as well as those ions obtained by ionizing neat alcohol or ether samples alone. Theoretical calculations, carried out to establish the energetics of the various possible reactions leading to the formation of the observed binary adducts, indicate that the most thermodynamically favorable pathway corresponds to the addition of a protonated alcohol monomer to neutral ether.

  5. Clinical Application of Ambient Ionization Mass Spectrometry

    PubMed Central

    Li, Li-Hua; Hsieh, Hua-Yi; Hsu, Cheng-Chih

    2017-01-01

    Ambient ionization allows mass spectrometry analysis directly on the sample surface under atmospheric pressure with almost zero sample pretreatment. Since the development of desorption electrospray ionization (DESI) in 2004, many other ambient ionization techniques were developed. Due to their simplicity and low operation cost, rapid and on-site clinical mass spectrometry analysis becomes real. In this review, we will highlight some of the most widely used ambient ionization mass spectrometry approaches and their applications in clinical study. PMID:28337399

  6. Studies of the mechanism of the cluster formation in a thermally sampling atmospheric pressure ionization mass spectrometer

    SciTech Connect

    Albrecht, Sascha Stroh, Fred; Klopotowski, Sebastian Derpmann, Valerie Klee, Sonja Brockmann, Klaus J. Benter, Thorsten

    2014-01-15

    In this study a thermally sampling atmospheric pressure ionization mass spectrometer is described and characterized. The ion transfer stage offers the capability to sample cluster ions at thermal equilibrium and during this transfer fundamental processes possibly affecting the cluster distribution are also readily identified. Additionally, the transfer stage combines optional collision-induced dissociation (CID) analysis of the cluster composition with thermal equilibrium sampling of clusters. The performance of the setup is demonstrated with regard to the proton-bound water cluster system. The benefit of the studied processes is that they can help to improve future transfer stages and to understand cluster ion reactions in ion mobility tubes and high-pressure ion sources. In addition, the instrument allows for the identification of fragmentation and protonation reactions caused by CID.

  7. Light scattering study of partially ionized poly(acrylic acid) systems : comparison between gels and solutions

    NASA Astrophysics Data System (ADS)

    Moussaid, A.; Munch, J. P.; Schosseler, F.; Candau, S. J.

    1991-06-01

    Static and quasielastic light scattering experiments have been performed on the reaction bath of partially neutralized poly(acrylic acid) solutions and gels. The intensity scattered from gels is independent on the scattering wavevector, giving thus evidence that the gels are homogeneous at the scale of the wavelength of the light, contrary to what is generally observed in neutral gels. The comparison of the time and ensemble averages of the autocorrelation function of scattered light intensity shows that the gels behave with respect to that experiment as ergodic media. The variations of the intensity scattered from gels and solutions, with the ionization degree and the polymer concentration were found to be in good agreement with those predicted from simple theoretical arguments. The variations of the cooperative diffusion with these same parameters were found similar for gels and solutions. Des mesures de diffusion statique et quasiélastique de la lumière ont été effectuées sur des solutions et des gels d'acide poly(acrylique) partiellement ionisés. L'intensité diffusée par les gels est indépendante du vecteur d'onde de transfert, ce qui montre leur homogénéité, contrairement au cas des gels neutres. La comparaison des moyennes temporelle et spatiale de la fonction d'autocorrélation de l'intensité de la lumière diffusée montre que ces gels se comportent comme des milieux ergodiques. Les variations de l'intensité diffusée par les gels et les solutions en fonction de la concentration en polymère et du degré d'ionisation sont en bon accord avec les prédictions théoriques. Les variations du coefficient de diffusion avec ces mêmes paramètres sont identiques pour les gels et les solutions.

  8. Electrospray Ionization Mechanisms for Large Polyethylene Glycol Chains Studied Through Tandem Ion Mobility Spectrometry

    NASA Astrophysics Data System (ADS)

    Larriba, Carlos; de la Mora, Juan Fernandez; Clemmer, David E.

    2014-08-01

    Ion mobility mass spectrometry (IMS-MS) is used to investigate the abundance pattern, n z (m) of Poly-(ethyleneglycol) (PEG) electrosprayed from water/methanol as a function of mass and charge state. We examine n z (m) patterns from a diversity of solution cations, primarily dimethylammonium and triethylammonium. The ability of PEG chains to initially attach to various cations in the spraying chamber, and to retain them (or not) on entering the MS, provide valuable clues on the ionization mechanism. Single chains form in highly charged and extended shapes in most buffers. But the high initial charge they hold under atmospheric pressure is lost on transit to the vacuum system for large cations. In contrast, aggregates of two or more chains carry in all buffers at most the Rayleigh charge of a water drop of the same volume. This shows either that they form via Dole's charge residue mechanism, or that highly charged and extended aggregates are ripped apart by Coulombic repulsion. IMS-IMS experiments in He confirm these findings, and provide new mechanistic insights on the stability of aggregates. When collisionally activated, initially globular dimers are stable. However, slightly nonglobular dimers projecting out a linear appendix are segregated into two monomeric chains. The breakup of a charged dimer is therefore a multi-step process, similar to the Fenn-Consta polymer extrusion mechanism. The highest activation barrier is associated to the first step, where a short chain segment carrying a single charge escapes (ion-evaporates) from a charged drop, leading then to gradual field extrusion of the whole chain out of the drop.

  9. Liquid chromatographic study of the enzymatic degradation of endomorphins, with identification by electrospray ionization mass spectrometry.

    PubMed

    Péter, A; Tóth, G; Tömböly, C; Laus, G; Tourwè, D

    1999-06-18

    The recently discovered native endomorphins play an important role in opioid analgesia, but their metabolic fate in the organism remains relatively little known. This paper describes the application of high-performance liquid chromatography combined with electrospray ionization mass spectrometry to identify the degradation products resulting from the incubation of endomorphins with proteolytic enzymes. The native endomorphin-1, H-Tyr-Pro-Trp-Phe-NH2 (1), and endomorphin-2, H-Tyr-Pro-Phe-Phe-NH2 (2), and an analog of endomorphin-2, H-Tyr-Pro-Phe-Phe-OH (3), were synthetized, and the levels of their resistance against carboxypeptidase A, carboxypeptidase Y, aminopeptidase M and proteinase A were determined. The patterns of peptide metabolites identified by this method indicated that carboxypeptidase Y first hydrolyzes the C-terminal amide group to a carboxy group, and then splits the peptides at the Trp3-Phe4 or Phe3-Phe4 bond. The remaining fragment peptides are stable against the enzymes investigated. Carboxypeptidase A degrades only analog 3 at the Phe3-Phe4 bond. Aminopeptidase M cleaves the peptides at the Pro2-Trp3 or Pro2-Phe3 bond. The C-terminal fragments hydrolyze further, giving amino acids and Phe-NH2-s while the N-terminal part displays a resistance to further aminopeptidase M digestion. Proteinase A exhibits a similar effect to carboxypeptidase Y: the C-terminal amide group is first converted to a carboxy group, and one amino acid is then split off from the C-terminal side.

  10. H II Region Ionization of the Interstellar Medium: A Case Study of NGC 7538

    NASA Astrophysics Data System (ADS)

    Luisi, Matteo; Anderson, L. D.; Balser, Dana S.; Bania, T. M.; Wenger, Trey V.

    2016-06-01

    Using data from the Green Bank Telescope, we analyze the radio continuum (free-free) and radio recombination line (RRL) emission of the compact H ii region NGC 7538 (Sharpless 158). We detect extended radio continuum and hydrogen RRL emission beyond the photodissociation region (PDR) toward the north and east, but a sharp decrease in emission toward the south and west. This indicates that a non-uniform PDR morphology is affecting the amount of radiation “leaking” through the PDR. The strongest carbon RRL emission is found in the western PDR that appears to be dense. We compute a leaking fraction f R = 15 ± 5% of the radio continuum emission measured in the plane of the sky which represents a lower limit when accounting for the three-dimensional geometry of the region. We detect an average {}4{{{He}}}+/{{{H}}}+ abundance ratio by number of 0.088 ± 0.003 inside the H ii region and a decrease in this ratio with increasing distance from the region beyond the PDR. Using Herschel Space Observatory data, we show that small dust temperature enhancements to the north and east of NGC 7538 coincide with extended radio emission, but that the dust temperature enhancements are mostly contained within a second PDR to the east. Unlike the giant H ii region W43, the radiation leaking from NGC 7538 seems to only affect the local ambient medium. This suggests that giant H ii regions may have a large effect in maintaining the ionization of the interstellar medium.

  11. Electron-impact ionization and dissociative ionization of biomolecules

    NASA Astrophysics Data System (ADS)

    Huo, Winifred

    2006-05-01

    Oxidative damages by ionizing radiation are the source of radiation-induced damages to human health. It is recognized that secondary electrons play a role in the damage process, particularly important is the damage of DNA by electrons, potentially leading to mutagenesis. The damage can be direct, by creating a DNA lesion, or indirect, by producing radicals that attack the DNA. Molecular-level study of electron interaction with DNA provides information on the damage pathways and dominant mechanisms. This investigation focuses on ionization and dissociative ionization (DI) of DNA fragments by electron-impact. For ionization we use the improved binary-encounter dipole (iBED) model [W.M. Huo, Phys. Rev. A64, 042719-1 (2001)]. For DI it is assumed that electron motion is much faster than nuclear motion, allowing DI to be treated as a two-step process and the DI cross section given by the product of the ionization cross section and dissociation probability. The ionization study covers DNA bases, sugar phosphate backbone, and nucleotides. An additivity principle is observed. For example, the sum of the ionization cross sections of the separate deoxyribose and phosphate fragments is in close agreement with the C3'- and C5'-deoxyribose-phospate cross sections, differing by less than 5%. The result implies that certain properties of the DNA, like the total ionization cross section, are localized properties and an additivity principle may apply. This allows us to obtain properties of a larger molecular system built up from the results of smaller subsystem fragments. The DI of guanine and cytosine has been studied. For guanine, a proton is produced from the channel where the ionized electron originates from a molecular orbital with significant charge density along the N(1)-H bond. The interaction of the proton with cytosine was also studied.

  12. Broadband non-selective excitation of plutonium isotopes for isotope ratio measurements in resonance ionization mass spectrometry: a theoretical study.

    PubMed

    Sankari, M

    2012-10-15

    Making isotope ratio measurements with minimum isotope bias has always been a challenging task to mass spectrometrists, especially for the specific case of plutonium, owing to the strategic importance of the element. In order to use resonance ionization mass spectrometry (RIMS) as a tool for isotope ratio measurements, optimization of the various laser parameters and other atomic and system parameters is critical to minimize isotopic biases. Broadband simultaneous non-selective excitation of the isotopes of plutonium in the triple resonance excitation scheme with λ(1) = 420.77 nm, λ(2) = 847.28 nm, and λ(3) = 767.53 nm based on density matrix formalism has been theoretically computed for the determination of isotope ratios. The effects of the various laser parameters and other factors such as the atomization temperature and the dimensions of the atomic beam on the estimation of isotope ratios were studied. The effects of Doppler broadening, and time-dependent excitation parameters such as Rabi frequencies, ionization rate and the effect of non-Lorenztian lineshape have all been incorporated. The average laser powers and bandwidths for the three-excitation steps were evaluated for non-selective excitation. The laser intensity required to saturate the three-excitation steps were studied. The two-dimensional lineshape contour and its features were investigated, while the reversal of peak asymmetry of two-step and two-photon excitation peaks under these conditions is discussed. Optimized powers for the non-selective ionization of the three transitions were calculated as 545 mW, 150 mW and 545 mW and the laser bandwidth for all the three steps was ~20 GHz. The isotopic bias between the resonant and off-resonant isotope under the optimized conditions was no more than 9%, which is better than an earlier reported value. These optimized laser power and bandwidth conditions are better than in the earlier experimental work since these comprehensive calculations yield

  13. Three new anti-proliferative Annonaceous acetogenins with mono-tetrahydrofuran ring from graviola fruit (Annona muricata).

    PubMed

    Sun, Shi; Liu, Jingchun; Kadouh, Hoda; Sun, Xiuxiu; Zhou, Kequan

    2014-06-15

    Bioassay-guided fractionation of the fruit powder of graviola (Annona muricata) yielded three novel compounds: muricins J, K, and L. The compounds are all C35 Annonaceous acetogenins with a mono-tetrahydrofuran ring and four hydroxyls. Their structures were elucidated by spectral methods and chemical modification after isolation via chromatographic techniques and HPLC purification. These three acetogenins demonstrated an antiproliferative against human prostate cancer PC-3 cells.

  14. Unexpected lateral-lithiation-induced alkylative ring opening of tetrahydrofurans in deep eutectic solvents: synthesis of functionalised primary alcohols.

    PubMed

    Sassone, Francesca C; Perna, Filippo M; Salomone, Antonio; Florio, Saverio; Capriati, Vito

    2015-06-11

    o-Tolyl-substituted tetrahydrofurans undergo highly regioselective ring opening with the concomitant formation of new C-C bonds as the result of a lateral lithiation reaction. This reaction provides a new method for the synthesis of functionalised primary alcohols and can be run directly in protic eutectic mixtures as benign reaction media at 0 °C and under air, competitively with protonolysis.

  15. Laser desorption ionization mass spectrometry in the study of natural and synthetic melanins. II--Serotonin melanins.

    PubMed

    Bertazzo, A; Biasiolo, M; Costa, C; Allegri, G; Elli, G; Seraglia, R; Traldi, P

    1994-07-01

    Various biosynthetic melanins obtained by enzymic oxidation of serotonin with polyphenol oxidase from Psalliota campestris mushroom or potato, and with tyrosinase from Sepia officinalis or from Sigma were studied by means of laser desorption ionization mass spectrometry. Various oligomeric clusters were evidenced, proving that the examined melanins are composed of sets of different oligomers, the production of which strongly depends on the enzyme reaction. While serotonin melanins obtained with polyphenol oxidase from potato showed wide species distribution with molecular weights ranging from 2008 to 13,000 Da, the same melanins obtained from mushroom showed oligomer distributions from 1505 to 9000 Da. Serotonin melanins prepared with tyrosinase from Sepia showed oligomers from 1636 to 18,000 Da. A dopa-melanin obtained with mushroom polyphenol oxidase showed oligomer species from 1709 to 17,874 Da. Comparison of molecular weight distributions of the various oligomer sets in serotonin melanins with those in tyrosine melanins revealed clear differences, which are investigated and discussed.

  16. Complexation of diazaperylene and bisisoquinoline with transition metal ions in the gas phase studied by electrospray ionization mass spectrometry.

    PubMed

    Starke, Ines; Kammer, Stefan; Grunwald, Nicolas; Schilde, Uwe; Holdt, Hans-Jürgen; Kleinpeter, Erich

    2008-01-01

    The complex formation of the ligands 1,12-diazaperylene (dap), 1,1'-bisisoquinoline (bis), 2,2'-bipyridine (bpy) and 1,10-phenanthroline (phen) with transition metal ions (M = Fe, Co, Ni, Cu, Zn, Ru, Os, Re, Pd, Pt, Ag and Cd) in the gas phase has been studied by electrospray ionization mass spectrometry. With the exception of Ru, Os, Fe, Ni and Cu, singly charged complexes [MLn](+) (n = 1,2) were observed. The complexes of dap and bis with Ru, Os, Fe and Ni ions, and the mixed ligand complexes with bpy and phen, are preferably of the doubly charged type [ML3]2+. In addition, collision-induced dissociation (CID) measurements were employed to evaluate the relative stabilities of these complexes. The CID experiments of mixed-ligand complexes which contain both dap and phen or dap and bpy exhibit preferential elimination of bpy, indicating that bpy is a weaker ligand than phen and dap.

  17. A study for the detection of ionizing particles with phototransistors on thick high-resistivity silicon substrates

    NASA Astrophysics Data System (ADS)

    Batignani, G.; Angelini, C.; Bisogni, M. G.; Boscardin, M.; Bettarini, S.; Bondioli, M.; Bosisio, L.; Bucci, F.; Calderini, G.; Carpinelli, M.; Ciacchi, M.; Dalla Betta, G. F.; Dittongo, S.; Forti, F.; Giorgi, M. A.; Gregori, P.; Han, D. J.; Manfredi, P. F.; Manghisoni, M.; Marchiori, G.; Neri, N.; Novelli, M.; Paoloni, E.; Piemonte, C.; Rachevskaia, I.; Rama, M.; Ratti, L.; Re, V.; Rizzo, G.; Ronchin, S.; Rosso, V.; Simi, G.; Speziali, V.; Stefanini, A.; Zorzi, N.

    2004-09-01

    We report on bipolar NPN phototransistors fabricated at ITC-IRST on thick high-resistivity silicon substrates. The phototransistor emitter is composed of a phosphorus n+ implant, the base is a diffused high-energy boron implant, and the collector is the 600-800 μm thick silicon bulk, contacted on the backplane. We have studied the current amplification for two different doping profiles of the emitter, obtaining values of β ranging from 60 to 3000. For various emitter and base configurations, we measured the static device characteristics and extracted the leakage currents and the base resistance, verifying the fundamental relationship between them and the total base capacitances. The use of such phototransistors to detect ionizing particles is exploited and discussed.

  18. Numerical study of electric potential formation in a weakly ionized plasma flowing supersonically through open magnetic field lines

    NASA Astrophysics Data System (ADS)

    Laosunthara, Ampan; Takeda, Jun; Akatsuka, Hiroshi

    2017-01-01

    We investigate the mechanism of space potential formation due to a diverging magnetic field on a rarefied weakly ionized plasma flowing supersonically by performing a hybrid simulation. Ions and neutrals are treated by the particle-based direct simulation Monte Carlo method, while electrons are treated as a fluid to save time and memory. We apply an electron continuity equation in order to treat the electron velocity independently of the ion velocity. We find the number density of ions (and electrons) distributed along the magnetic field. We also find electron rotation along the flowing direction. Since we remove the current-free condition assumed in our previous study, we find that the longitudinal variation in the space potential agrees reasonably well with our previous experimental results.

  19. A numerical study of the interhemispheric asymmetry of the equatorial ionization anomaly in solstice at solar minimum

    NASA Astrophysics Data System (ADS)

    Dang, Tong; Luan, Xiaoli; Lei, Jiuhou; Dou, Xiankang; Wan, Weixing

    2016-09-01

    In this study, the mechanisms of interhemispheric asymmetry of the equatorial ionization anomaly (EIA) in June solstice at solar minimum were investigated through a series of simulations using the Thermosphere Ionosphere Electrodynamics General Circulation Model. Our results indicate that the transequatorial neutral wind is the main cause of the interhemispheric asymmetry. The transequatorial wind transports plasma from the summer hemisphere to winter hemisphere, leading to an enhancement in the winter EIA crest. Meanwhile, the ion production and loss are also important factors in producing the EIA asymmetry through photochemical processes. The longitudinal variations of the EIA interhemispheric asymmetry are also explored through imposing each term of ion continuity equation longitudinally independent. Our term analysis results suggest that the neutral wind variation dominates the longitudinal patterns of the interhemispheric asymmetry, while the E × B drift and photochemical process contribute less.

  20. Advantages of using tetrahydrofuran-water as mobile phases in the quantitation of cyclosporin A in monkey and rat plasma by liquid chromatography-tandem mass spectrometry.

    PubMed

    Li, Austin C; Li, Yinghe; Guirguis, Micheal S; Caldwell, Robert G; Shou, Wilson Z

    2007-01-04

    A new analytical method is described here for the quantitation of anti-inflammatory drug cyclosporin A (CyA) in monkey and rat plasma. The method used tetrahydrofuran (THF)-water mobile phases to elute the analyte and internal standard, cyclosporin C (CyC). The gradient mobile phase program successfully eluted CyA into a sharp peak and therefore improved resolution between the analyte and possible interfering materials compared with previously reported analytical approaches, where CyA was eluted as a broad peak due to the rapid conversion between different conformers. The sharp peak resulted from this method facilitated the quantitative calculation as multiple smoothing and large number of bunching factors were not necessary. The chromatography in the new method was performed at 30 degrees C instead of 65-70 degrees C as reported previously. Other advantages of the method included simple and fast sample extraction-protein precipitation, direct injection of the extraction supernatant to column for analysis, and elimination of evaporation and reconstitution steps, which were needed in solid phase extraction or liquid-liquid extraction reported before. This method is amenable to high-throughput analysis with a total chromatographic run time of 3 min. This approach has been verified as sensitive, linear (0.977-4000 ng/mL), accurate and precise for the quantitation of CyA in monkey and rat plasma. However, compared with the usage of conventional mobile phases, the only drawback of this approach was the reduced detection response from the mass spectrometer that was possibly caused by poor desolvation in the ionization source. This is the first report to demonstrate the advantages of using THF-water mobile phases to elute CyA in liquid chromatography.

  1. Lead(II)-catalyzed oxidation of guanine in solution studied with electrospray ionization mass spectrometry.

    PubMed

    Banu, Laura; Blagojevic, Voislav; Bohme, Diethard K

    2012-10-04

    The oxidation of guanine was investigated in water/methanol solution both in the absence and in the presence of Pb(II) with a variable temperature reactor coupled to a tandem mass spectrometer that allowed signature ions of solution reagents and products to be monitored by electrospray ionization (ESI). Two different oxidizing agents were employed, one strong (peroxymonosulfuric acid) and one weaker (hydrogen peroxide). Peroxymonosulfuric acid was observed to oxidize guanine rapidly at room temperature, k(app) > 10(-2) s(-1), whether in the absence or in the presence of Pb(II), to produce spiroiminohydantoin. Guanine did not show measurable oxidation by hydrogen peroxide in the absence of Pb(II) at concentrations of H(2)O(2) up to 1 M at temperatures up to 333 K (k(app) < 3 × 10(-8) s(-1) at 298 K), but in the presence of Pb(II), it was observed to produce both 5-carboxamido-5-formamido-2-iminohydantoin (2-Ih) and imidazolone (Iz) in a ratio of 2.3 ± 0.1 with a total rate enhancement of more than 4 × 10(3). The activation energy was measured to be 82 ± 11 kJ mol(-1) and is more than 120 kJ mol(-1) lower than that for the uncatalyzed oxidation with hydrogen peroxide measured to be at least 208 ± 26 kJ mol(-1). An activation energy of 113 ± 9 kJ mol(-1) has been reported by Bruskov et al. (Nucleic Acids Res.2002, 30, 1354) for the heat-induced oxidation by hydrogen peroxide of guanine embedded as guanosine in DNA which leads to the production of 8-oxo-7,8-dihydro-guanine (8-oxo-Gua). The atomic lead dication lowers the activation energy by activating the hydrogen peroxide oxidant, possibly by O-O bond activation, and by directing the oxidation, possibly through coordination to the functional groups adjacent to the carbon C5: the C6 carbonyl group and the N7 nitrogen. The coupling of tandem mass spectrometry (MS(2)) with a simple variable temperature reactor by ESI proved to be very effective for measuring reaction kinetics and activation energies in solution

  2. Characteristics of tetrahydrofuran-based electrolytes with magnesium alkoxide additives for rechargeable magnesium batteries

    NASA Astrophysics Data System (ADS)

    Kim, In-Tae; Yamabuki, Kazuhiro; Sumimoto, Michinori; Tsutsumi, Hiromori; Morita, Masayuki; Yoshimoto, Nobuko

    2016-08-01

    The electrochemical behavior of magnesium (Mg) metal was investigated in tetrahydrofuran (THF)-based solutions containing magnesium bromide (MgBr2) and/or magnesium ethoxide (Mg(OEt)2). THF solutions containing a single solute, MgBr2 or Mg(OEt)2, show no visible faradaic current based on Mg deposition and/or dissolution. However, the electrolyte system containing both solutes, MgBr2 + Mg(OEt)2/THF, gives a reversible current response of Mg deposition and dissolution. The ionic structure of the electrolyte system containing the binary solute was examined by infrared (IR) spectroscopy and density functional theory (DFT) calculations. It was confirmed that MgBr2 and Mg(OEt)2 are coordinated (solvated) with THF molecules to form an EtOsbnd Mgsbnd Br·4THF complex. The DFT calculations also suggest the possible formation of μ-complexes for the MgBr2/Mg(OEt)2 binary system in THF. The voltammetric responses at the Pt electrode indicate low overpotential and high coulombic efficiency for Mg deposition and dissolution in THF-based solutions containing suitable molar ratios of MgBr2 and Mg(OEt)2. The constant-current charge-discharge cycling of Mg in MgBr2 + Mg(OEt)2/THF electrolyte also shows low overpotential and good cyclability over 300 cycles.

  3. A high selective cataluminescence sensor for the determination of tetrahydrofuran vapor

    NASA Astrophysics Data System (ADS)

    Cao, Xiaoan; Dai, Huimei; Chen, Suilin; Zeng, Jiayi; Zhang, Keke; Sun, Yan

    2013-02-01

    A novel tetrahydrofuran (THF) vapor sensor was designed based on the cataluminescence (CTL) of THF on nanosized γ-Al2O3/MgO (mol ratio = 1.5:1). SEM and XRD were applied for its characterization. We found that the CTL was strongly produced when THF vapor flowed through a nanosized Al-Mg mixed-metal oxide surface, while the CTL was weakly generated when THF vapor flowed through a single nanosized γ-Al2O3 or MgO surface. Quantitative analysis was performed at an optimal temperature of 279 °C, a wavelength of 460 nm and a flow rate of 360 mL min-1. The linear range of the CTL intensity versus concentrations of THF vapor was 1.0-3000 mL m-3 with a detection limit of 0.67 mL m-3. No (or only very low) interference was observed by formaldehyde, methanol, ethanol, benzene, toluene, ethyl acetate, ammonia, cyclohexane, chloroform, glycol armour ether, glycol ether, isopropyl ether and n-butyl ether or acetic acid. Since the response of the sensor was rapid and the system was easy to handle, we believe that the sensor has great potential for real-world use.

  4. Diffusive hydrogen inter-cage migration in hydrogen and hydrogen-tetrahydrofuran clathrate hydrates.

    PubMed

    Cao, Huayu; English, Niall J; MacElroy, J M D

    2013-03-07

    Classical equilibrium molecular dynamics simulations have been performed to investigate the diffusive properties of inter-cage hydrogen migration in both pure hydrogen and mixed hydrogen-tetrahydrofuran sII hydrates at 0.05 kbar from 200 K and up to 250-260 K. For mixed H2-THF systems in which there is single H2 occupation of the small cage (labelled "1S1L"), we found that no H2 migration occurs. However, for more densely filled H2-THF and pure-H2 systems, in which there is more than single H2 occupation in the small cage, there is an onset of inter-cage H2 migration events from the small cages to neighbouring cavities at around 200 K. The mean square displacements of the hydrogen molecules were fitted to a mathematical model consisting of an anomalous term and a Fickian component, and nonlinear regression fitting was conducted to estimate long-time (inter-cage) diffusivities. An approximate Arrhenius temperature relationship for the diffusion coefficient was examined and an estimation of the hydrogen hopping energy barrier was calculated for each system.

  5. Solvent-guest control of two extremely similar tetrahydrofuran inclusion structures.

    PubMed

    Gao, Jiabin; Bhadbhade, Mohan M; Bishop, Roger

    2014-02-01

    Racemic 2,4,6,8-tetracarbomethoxybicyclo[3.3.0]octa-2,6-diene-3,7-diol, C16H18O10 (1), was known previously to yield two solvent-free polymorphs and also a clathrate inclusion crystal form. Crystallization of (1) yields two inclusion compounds containing tetrahydrofuran (THF): (1)4·THF is obtained from a mixture of THF and methanol, whereas (1)2·THF is obtained from pure THF. The X-ray crystal structures reveal that the two compounds are extremely similar and that their host arrangements are essentially identical. They differ, however, in the proportion, orientation and host-guest interaction of the included THF molecules. The disordered guest molecules in (1)4·THF are oriented along the guest channel direction, whereas in (1)2·THF they lie across the channel. This unusual solvent-guest control of inclusion structures has implications relating to the formation of polymorphic structures and other competing crystal forms.

  6. Effects of cyclic structure inhibitors on the morphology and growth of tetrahydrofuran hydrate crystals

    NASA Astrophysics Data System (ADS)

    Li, Sijia; Wang, Yanhong; Lang, Xuemei; Fan, Shuanshi

    2013-08-01

    Morphology and growth of hydrate crystals with cyclic structure inhibitors at a hydrate-liquid interface were directly observed through a microscopic manipulating apparatus. Tetrahydrofuran (THF) hydrate was employed as an objective. The effects of four kind of cyclic structure inhibitors, polyvinylpyrrolidone (PVP), poly(N-vinyl-2-pyrrolidone-co-2-vinyl pyridine) (PVPP), poly(2-vinyl pyridine-co-N-vinylcaprolactam) (PVPC) and poly(N-vinylcaprolactam) (PVCap), were investigated. Morphological patterns between each hydrate crystal growth from hydrate-liquid interface into droplet were found differ significantly. Lamellar structure growth of hydrate crystal was observed without inhibitor, while with PVP was featheriness-like, PVPP was like long dendritic crystal, PVPC was Mimosa pudica leaf-like and PVCap was like weeds. The growth rate of hydrate crystal without inhibitor was 0.00498 mm3/s, while with PVPP, PVPC and PVCap, were 0.00339 mm3/s, 0.00350 mm3/s, 0.00386 mm3/s and 0.00426 mm3/s, respectively. Cyclic structure inhibitors can decrease the growth rate, degree of reduction in growth rate of hydrate crystals decrease with the increase of cylinder number.

  7. Cosolvent pretreatment in cellulosic biofuel production: Effect of tetrahydrofuran-water on lignin structure and dynamics

    DOE PAGES

    Smith, Micholas Dean; Mostofian, Barmak; Cheng, Xiaolin; ...

    2015-10-05

    The deconstruction of cellulose is an essential step in the production of ethanol from lignocellulosic biomass. However, the presence of lignin hinders this process. Recently, a novel cosolvent based biomass pretreatment method called CELF (Cosolvent Enhanced Lignocellulosic Fractionation) which employs tetrahydrofuran (THF) in a single phase mixture with water, was found to be highly effective at solubilizing and extracting lignin from lignocellulosic biomass and achieving high yields of fermentable sugars. Here, using all-atom molecular-dynamics simulation, we find that THF preferentially solvates lignin, and in doing so, shifts the equilibrium configurational distribution of the biopolymer from a crumpled globule to coil,more » independent of temperature. Whereas pure water is a bad solvent for lignin, the THF : water cosolvent acts as a "theta" solvent, in which solvent : lignin and lignin : lignin interactions are approximately equivalent in strength. Furthermore, under these conditions, polymers do not aggregate, thus providing a mechanism for the observed lignin solubilization that facilitates unfettered access of celluloytic enzymes to cellulose.« less

  8. Cosolvent pretreatment in cellulosic biofuel production: Effect of tetrahydrofuran-water on lignin structure and dynamics

    SciTech Connect

    Smith, Micholas Dean; Mostofian, Barmak; Cheng, Xiaolin; Petridis, Loukas; Cai, Charles M.; Wyman, Charles E.; Smith, Jeremy C.

    2015-10-05

    The deconstruction of cellulose is an essential step in the production of ethanol from lignocellulosic biomass. However, the presence of lignin hinders this process. Recently, a novel cosolvent based biomass pretreatment method called CELF (Cosolvent Enhanced Lignocellulosic Fractionation) which employs tetrahydrofuran (THF) in a single phase mixture with water, was found to be highly effective at solubilizing and extracting lignin from lignocellulosic biomass and achieving high yields of fermentable sugars. Here, using all-atom molecular-dynamics simulation, we find that THF preferentially solvates lignin, and in doing so, shifts the equilibrium configurational distribution of the biopolymer from a crumpled globule to coil, independent of temperature. Whereas pure water is a bad solvent for lignin, the THF : water cosolvent acts as a "theta" solvent, in which solvent : lignin and lignin : lignin interactions are approximately equivalent in strength. Furthermore, under these conditions, polymers do not aggregate, thus providing a mechanism for the observed lignin solubilization that facilitates unfettered access of celluloytic enzymes to cellulose.

  9. Sonic spray ionization technology: performance study and application to a LC/MS analysis on a monolithic silica column for heroin impurity profiling.

    PubMed

    Dams, Riet; Benijts, Tom; Günther, Wolfgang; Lambert, Willy; De Leenheer, André

    2002-07-01

    Sonic spray (SS) ionization is a relatively novel atmospheric pressure ionization technique for LC/MS, based on the principle of "spray ionization", which only recently became commercially available. In this paper, we evaluate the performance of this ion source as an interface for LC/MS in comparison with the more traditional and better studied pneumatically assisted electrospray or ion spray (IS). The effect of organic modifiers, volatile acids, and buffer systems in the LC eluent on the ionization efficiency of both interfaces is described and some possible explanations for the observed phenomena are highlighted. We could conclude that the presence of organic solvents gradually increased the ionization efficiency for IS and SS, while volatile acids or buffers gave a significant signal suppression. Furthermore, we present the application of the sonic spray interface to a fast LC/MS analysis, for the simultaneous determination of the seven prime opium alkaloids in heroin impurity profiling. Chromatographic separation is performed in 5 min on a monolithic silica column (Chromolith Performance) with a gradient elution system and an optimized flow of 5 mL/min. By means of a postcolumn split of approximately 1/20, a coupling between the fast LC system and the mass spectrometer is made. The method is validated and successfully applied to the analysis of real-time seized heroin street samples.

  10. Ionizing diagnostic radiation exposure in patients with Crohn's disease: A retrospective study in a medium hospital and its predictive factors.

    PubMed

    Merino Rodríguez, Esther; Carrera Alonso, Elisa; Torralba González de Suso, Miguel; Sánchez da Silva, Marta; Martínez López, María; Sánchez-Tembleque Zarandona, María Dolores

    2017-10-04

    It is estimated that diagnostic medical radiation exposure may be responsable for 0.5-2% of cancers worldwide. Because of the relapsing course of Crohn's disease (CD), these patients usually requiere multiple ionizing radiation test. Stimating the total cumulative effective dose received by our CD patients and identifying the risk factors associated with the exposure to a cumulative effective dose due to the disease (CEED) > 50mSv. Retrospective cohort study (2001-2014). patients with CD. Risk dose >50mSv. For calculating de cumulative effective dose and the CEED, all the ionizing test done were taken. For identifying predictive factors for receiving a CEDD >50mSv, an univariate and a multivariate logistic regression analyses were performed using a >50mSv dose as dependent variable. Of the 267 patients analyzed the 24.6% of them received a cumulative effective dose > 50mSv and the 15.2% a CEED>50mSv. In the multivariate analysis, the following variables were identified as independent predictors associated with a CEDD >50mSv: major surgery (OR= 2.1; IC95% [1.1-3.8]; p=.019) and severity (OR= 20.6; IC95% [4.5-94.8]; p<.01). Patients with CD are more at risk of receiving risk CEED, so it would be advisable to monitor the cumulative effective dose received to anticipate our intervention in order to avoid reaching that dose. The ultrasounds and abdominal resonance enterography are alternatives in these cases, although their accessibility is limited in some centers. Copyright © 2017 Elsevier España, S.L.U. All rights reserved.

  11. A comparative study of highly-ionized Al plasma based on dual pulse laser-induced breakdown spectroscopy

    NASA Astrophysics Data System (ADS)

    Khalil, A. A. I.; Younis, W. O.; Gandol, M. A.

    2017-03-01

    We built a collinear dual-pulse laser-induced breakdown spectroscopy (DP-LIBS) system to study the aluminum (Al) plasma emission by installing a pair of Nd: YAG lasers operating at 266 and 1064 nm. The spectral intensities of selected aluminum doubly-ionized lines were employed to evaluate the optical emission spectra. The influences of the energy ratio of two pulsed lasers on the LIBS intensity for different Al doubly-ionized spectral lines were investigated. The de-excitation rate parameters of the excited ion and the electron impact excitation were computed using the analytical formulas proposed by Smeets and Vriens. The transition probabilities and energy states were computed using Hibbert's configuration interaction, computer package (CIV3). By solving the coupled rate equations including 1 s 22 s 22 p 6n s (2S), 1 s 22 s 22 p 6n p (2P), 1 s 22 s 22 p 6n d (2D) (n = 3-5) and 1 s 22 s 22 p 6n f (2F) (n = 4, 5) states, the level population densities were computed. We also proposed a theoretical population model in order to investigate the effectiveness of the various processes that might affect the population of the upper levels in Al plasma by using the rate coefficients. In addition, the population densities for the 19 upper levels were also computed. Good compatibility between the experimental and the theoretical model data had been observed. Our results might be significant as reference data for the optimization of the DP-LIBS spectrometry and diagnostics of laser produced plasmas.

  12. Studies on inverse optogalvanic and Penning ionization effects in ytterbium and neon transitions in Yb-Ne hollow cathode lamp

    NASA Astrophysics Data System (ADS)

    Kumar, P.; Saini, V. K.; Purbia, G. S.; Prakash, O.; Dixit, S. K.; Nakhe, S. V.

    2014-02-01

    This paper presents novel observations on inverse optogalvanic effect in Yb transition at 679.9 nm (3P1→3S1) in contrast with the observed normal optogalvanic effect at 648.9 nm (3P0→3S1) transition and Penning ionization in Yb3Ne mixture by probing Ne transitions at 626.65 (1s3→2p5), 633.44 (1s5→2p8), 650.65 (1s4→2p8) and 659.89 nm (1s2→2p2) in Yb3Ne hollow cathode lamp. These conclusions are derived by studying the optogalvanic signals temporal profile probed by DCM dye based narrow line-width ~2 GHz, short pulse ~20 ns, high repetition rate 5.0 kHz tunable dye laser, as a function of discharge current. The observed inverse optogalvanic effect is attributed to the transfer of Yb population in the level 3P0 through radiative decay from the upper level 3S1 of the transition. This proposition is confirmed by recording the emission spectra of Yb3Ne hollow cathode lamp. The Penning ionization signature in Ne optogalvanic signals is due to the quasi-resonances between Yb and Ne energy levels. Penning signature observed in optogalvanic signal of Ne transition at 650.65 nm is unique and attributed to the increase in concentration of Ne metastable level 1s5 through radiative decay from the 2p8 level.

  13. A vacuum-ultraviolet laser pulsed field ionization-photoelectron study of sulfur monoxide (SO) and its cation (SO+).

    PubMed

    Lam, Chow-Shing; Wang, Hailing; Xu, Yuntao; Lau, Kai-Chung; Ng, C Y

    2011-04-14

    Vacuum ultraviolet (VUV) laser pulsed field ionization-photoelectron (PFI-PE) spectroscopy has been applied to the study of the sulfur monoxide radical (SO) prepared by using a supersonically cooled radical beam source based on the 193 nm excimer laser photodissociation of SO(2). The vibronic VUV-PFI-PE bands for the photoionization transitions SO(+)(X(2)Π(1∕2); v(+) = 0) ← SO(X(3)Σ(-); v = 0); and SO(+)((2)Π(3∕2); v(+) = 0) ← SO(X(3)Σ(-); v = 0) have been recorded. On the basis of the semiempirical simulation of rotational branch contours observed in these PFI-PE bands, we have obtained highly precise ionization energies (IEs) of 83,034.2 ± 1.7 cm(-1) (10.2949 ± 0.0002 eV) and 83,400.4 ± 1.7 cm(-1) (10.3403 ± 0.0002 eV) for the formation of SO(+)(X(2)Π(1∕2); v(+) = 0) and SO(+)((2)Π(3∕2); v(+) = 0), respectively. The present VUV-PFI-PE measurement has enabled the direct determination of the spin-orbit coupling constant (A(0)) for SO(+)(X(2)Π(1∕2,3∕2)) to be 365.36 ± 0.12 cm(-1). We have also performed high-level ab initio quantum chemical calculations at the coupled-cluster level up to full quadruple excitations and complete basis set (CBS) extrapolation. The zero-point vibrational energy correction, the core-valence electronic correction, the spin-orbit coupling, and the high-level correction are included in the calculation. The IE[SO(+)(X(2)Π(1∕2,3∕2))] and A(0) predictions thus obtained are found to be in remarkable agreement with the experimental determinations.

  14. A comparative study of highly-ionized Al plasma based on dual pulse laser-induced breakdown spectroscopy

    NASA Astrophysics Data System (ADS)

    Khalil, A. A. I.; Younis, W. O.; Gandol, M. A.

    2016-10-01

    We built a collinear dual-pulse laser-induced breakdown spectroscopy (DP-LIBS) system to study the aluminum (Al) plasma emission by installing a pair of Nd: YAG lasers operating at 266 and 1064 nm. The spectral intensities of selected aluminum doubly-ionized lines were employed to evaluate the optical emission spectra. The influences of the energy ratio of two pulsed lasers on the LIBS intensity for different Al doubly-ionized spectral lines were investigated. The de-excitation rate parameters of the excited ion and the electron impact excitation were computed using the analytical formulas proposed by Smeets and Vriens. The transition probabilities and energy states were computed using Hibbert's configuration interaction, computer package (CIV3). By solving the coupled rate equations including 1s 22s 22p 6ns (2S), 1s 22s 22p 6np (2P), 1s 22s 22p 6nd (2D) (n = 3-5) and 1s 22s 22p 6nf (2F) (n = 4, 5) states, the level population densities were computed. We also proposed a theoretical population model in order to investigate the effectiveness of the various processes that might affect the population of the upper levels in Al plasma by using the rate coefficients. In addition, the population densities for the 19 upper levels were also computed. Good compatibility between the experimental and the theoretical model data had been observed. Our results might be significant as reference data for the optimization of the DP-LIBS spectrometry and diagnostics of laser produced plasmas.

  15. Study of the mass spectrometric behaviors of anthocyanins in negative ionization mode and its applications for characterization of anthocyanins and non-anthocyanin polyphenols

    USDA-ARS?s Scientific Manuscript database

    A study of the mass spectroscopic behaviors of anthocyanins in the negative ionization mode was reported and it can be used for differentiation anthocyanins from other non-anthocyanin polyphenols. For the study, an ultra-high performance liquid chromatography with high resolution mass spectrometry (...

  16. Coincidence studies of capture and ionization in highly charged Iq+-He and Uq+-He collisions at medium velocities

    NASA Astrophysics Data System (ADS)

    Datz, S.; Hippler, R.; Andersen, L. H.; Dittner, P. F.; Knudsen, H.; Krause, H. F.; Miller, P. D.; Pepmiller, P. L.; Rosseel, T.; Schuch, R.; Stolterfoht, N.; Yamazaki, Y.; Vane, C. R.

    1990-04-01

    Electron capture and ionization processes were investigated for Iq+-He and Uq+-He collisions at incident energies 0.1-1.0 MeV/nucleon and for incident charge states q=5-44. Cross sections for single-electron capture, transfer ionization, single ionization, and double ionization were obtained using a projectile-ion recoil-ion coincidence technique. A pronounced interplay among the different electronic processes was observed. Cross sections for single ionization show a rather weak charge-state dependence, in disagreement with recent calculations of McKenzie and Olson [Phys. Rev. A 35, 2863 (1987)]. In a second experiment, photon recoil-ion coincidences were measured to obtain partial cross sections for capture into certain projectile n states. These measurements provide strong evidence that transfer ionization populates lower projectile n states than does single-electron capture. Zero-degree electron spectroscopy, coincident with charge capture for 0.5 MeV/nucleon U30+ projectiles revealed that the free electron in transfer ionization is released from the projectile to its continuum and from high-lying Rydberg states of the projectile.

  17. Femtosecond time-resolved ionization spectroscopy of ultrafast internal-conversion dynamics in polyatomic molecules: Theory and computational studies

    NASA Astrophysics Data System (ADS)

    Seel, Matthias; Domcke, Wolfgang

    1991-12-01

    A framework for the theoretical description of two-pulse time-resolved ionization spectroscopy of ultrafast excited-state dynamics of polyatomic molecules is developed. The radiation-matter interaction as well as intramolecular couplings in the excited-state manifold are treated nonperturbatively by solving the time-dependent Schrödinger equation. The numerical solution is based on a discretization of the ionization continua which becomes particularly efficient for ultrashort laser pulses. With this method converged computations of ionization signals become possible even for complex molecular systems. Computer simulations are performed for a model system representing three-dimensional non-Born-Oppenheimer excited-state dynamics on conically intersecting potential-energy surfaces (the S1 and S2 surfaces of pyrazine). The dependence of the observable time-resolved ionization signals (total ion yield as well as photoelectron spectrum) on the properties of the laser pulses (carrier frequency and pulse duration) is explored. It is demonstrated that ultrafast electronic decay processes as well as coherent vibrational motion in excited states can be monitored by pump-probe ionization with suitable pulses. The dependence of the time-resolved ionization signals on properties of the cation (ionization potentials and potential-energy surfaces) is also discussed.

  18. Intravenous magnesium sulphate relieves migraine attacks in patients with low serum ionized magnesium levels: a pilot study.

    PubMed

    Mauskop, A; Altura, B T; Cracco, R Q; Altura, B M

    1995-12-01

    1. We tested the hypothesis that patients with an acute attack of migraine headache and low serum levels (< 0.54 mmol/l) of ionized magnesium are more likely to respond to an intravenous infusion of magnesium sulphate (MgSO4) than patients with higher serum ionized magnesium levels. 2. Serum ionized magnesium levels were drawn immediately before infusion of 1 g of MgSO4 in 40 consecutive patients with an acute migraine headache. 3. Pain reduction of 50% or more as measured on a headache intensity verbal scale of 1 to 10, occurred within 15 min of infusion in 35 patients. In 21 patients, at least this degree of improvement or complete relief persisted for 24h or more. Pain relief lasted at least 24h in 18 of 21 patients (86%) with serum ionized magnesium levels below 0.54 mmol/l, and in 3 of 19 patients (16%) with ionized magnesium levels at or above 0.54 mmol/l (P < 0.001). Mean ionized magnesium levels in patients with relief lasting for at least 24h were significantly lower than in patients with no relief or brief relief (P < 0.01). 4. Measurement of serum ionized magnesium levels may be useful in identifying patients with migraine headaches who may respond to an intravenous infusion of MgSO4.

  19. A patient-specific quality assurance study on absolute dose verification using ionization chambers of different volumes in RapidArc treatments.

    PubMed

    Syam Kumar, S A; Sukumar, Prabakar; Sriram, Padmanaban; Rajasekaran, Dhanabalan; Aketi, Srinu; Vivekanandan, Nagarajan

    2012-01-01

    The recalculation of 1 fraction from a patient treatment plan on a phantom and subsequent measurements have become the norms for measurement-based verification, which combines the quality assurance recommendations that deal with the treatment planning system and the beam delivery system. This type of evaluation has prompted attention to measurement equipment and techniques. Ionization chambers are considered the gold standard because of their precision, availability, and relative ease of use. This study evaluates and compares 5 different ionization chambers: phantom combinations for verification in routine patient-specific quality assurance of RapidArc treatments. Fifteen different RapidArc plans conforming to the clinical standards were selected for the study. Verification plans were then created for each treatment plan with different chamber-phantom combinations scanned by computed tomography. This includes Medtec intensity modulated radiation therapy (IMRT) phantom with micro-ionization chamber (0.007 cm(3)) and pinpoint chamber (0.015 cm(3)), PTW-Octavius phantom with semiflex chamber (0.125 cm(3)) and 2D array (0.125 cm(3)), and indigenously made Circular wax phantom with 0.6 cm(3) chamber. The measured isocenter absolute dose was compared with the treatment planning system (TPS) plan. The micro-ionization chamber shows more deviations when compared with semiflex and 0.6 cm(3) with a maximum variation of -4.76%, -1.49%, and 2.23% for micro-ionization, semiflex, and farmer chambers, respectively. The positive variations indicate that the chamber with larger volume overestimates. Farmer chamber shows higher deviation when compared with 0.125 cm(3). In general the deviation was found to be <1% with the semiflex and farmer chambers. A maximum variation of 2% was observed for the 0.007 cm(3) ionization chamber, except in a few cases. Pinpoint chamber underestimates the calculated isocenter dose by a maximum of 4.8%. Absolute dose measurements using the semiflex

  20. Numerical Study of the Wave-Vector Dependence of the Electron Interband Impact Ionization Rate in Bulk GaAs

    NASA Technical Reports Server (NTRS)

    Wang, Yang; Brennan, Kevin F.

    1994-01-01

    Ensemble Monte Carlo calculations of the electron interband impact ionization rate in bulk GaAs are presented using a wave-vector (k)-dependent formulation of the ionization transition rate. The transition rate is evaluated through use of numerically generated wavefunctions determined via a k-p calculation within the first two conduction bonds at numerous points within a finely spaced three-dimensional grid in k space. The transition rate is determined to be greatest for states within the second conduction band. It is found that the interband impact ionization transition rate in bulk GaAs is best characterized as having an exceedingly "soft" threshold energy. As a consequence, the dead space, defined as the distance over which the ionization probability for a given carrier is assumed to be zero, is estimated to be-much larger than that estimated using a "harder" threshold. These results have importance in the design of multiquantum-well avalanche photodiodes.

  1. Numerical study of the wave-vector dependence of the electron interband impact ionization rate in bulk GaAs

    NASA Technical Reports Server (NTRS)

    Wang, Yang; Brennan, Kevin F.

    1994-01-01

    Ensemble Monte Carlo calculations of the electron interband impact ionization rate in bulk GaAs are presented using a wave-vector (k)-dependent formulation of the ionization transition rate. The transition rate is evaluated through the use of numerically generated wavefunctions determined via a k-p calculation within the first two conduction bands at numerous points within a finely spaced three-dimensional grid in k space. The transition rate is determined to be greatest for states within the second conduction band. Is is found that the interband impact ionization transition rate in bulk GaAs is best characterized as having an exceedingly soft threshold energy. As a consequence, the dead space, defined as the distance over which the ionization probability for a given carrier is assumed to be zero, is estimated to be much larger than that estimated using a harder threshold. These results have importance in the design of the multiquantum-well avalanche photodiodes.

  2. INFLUENCE OF ELECTRON-IMPACT MULTIPLE IONIZATION ON EQUILIBRIUM AND DYNAMIC CHARGE STATE DISTRIBUTIONS: A CASE STUDY USING IRON

    SciTech Connect

    Hahn, M.; Savin, D. W.

    2015-02-10

    We describe the influence of electron-impact multiple ionization (EIMI) on the ionization balance of collisionally ionized plasmas. Previous ionization balance calculations have largely neglected EIMI. Here, EIMI cross-section data are incorporated into calculations of both equilibrium and non-equilibrium charge-state distributions (CSDs). For equilibrium CSDs, we find that EIMI has only a small effect and can usually be ignored. However, for non-equilibrium plasmas the influence of EIMI can be important. In particular, we find that for plasmas in which the temperature oscillates there are significant differences in the CSD when including versus neglecting EIMI. These results have implications for modeling and spectroscopy of impulsively heated plasmas, such as nanoflare heating of the solar corona.

  3. Nuclear Recoil Cross Sections from Time-dependent Studies of Two-Photon Double Ionization of Helium

    SciTech Connect

    Horner, Daniel A.; Rescigno, Thomas N.; McCurdy, C. William

    2009-12-21

    We examine the sensitivity of nuclear recoil cross sections produced by two-photon double ionization of helium to the underlying triple differential cross sections (TDCS) used in their computation. We show that this sensitivity is greatest in the energy region just below the threshold for sequential double ionization. Accurate TDCS, extracted from non-perturbative solutions of the time-dependent Schroedinger equation, are used here in new computations of the nuclear recoil cross section.

  4. The study of large biopolymer complexes in solution and the gas phase using electrospray ionization-FTICR mass spectrometry

    SciTech Connect

    Smith, R.D.; Lei, Q.P.; Wu, Qinyuan; Hofstadler, A.

    1997-12-31

    Electrospray ionization (ESI) can transfer large biopolymers and many noncovalently bound complexes into the gas phase and to preserve specific noncovalent biomolecular associations for subsequent mass spectrometric analysis. Although a number of details of the ESI process remain a subject of debate, it is now incontestable that many weak associations can survive transfer to the gas phase and are stable for periods of at least seconds. In this presentation, the application of ESI-Fourier transform ion cyclotron resonance (FTICR) mass spectrometry methods for the study of large biopolymers and their noncovalent complexes will be described. It will also be shown that competitive binding studies can be used to quickly establish relative binding affinities in solution, allowing combinatorial libraries to be rapidly screened. After measurements of the intact complex, dissociation studies can be conducted to probe the structure of the individual constituents of complexes. Studies comparing the relative stabilities of protein-ligand complexes in solution and desolvated in the gas phase will also be presented, and discussed from both fundamental and analytical perspectives.

  5. Baseline study of effects of ionizing radiation on the chromosomes of the marine worm, 'Neanthes arenaceodentata'. Technical note

    SciTech Connect

    Pesch, G.G.; Young, J.S.

    1981-09-01

    Between 1946 and 1970 the United States disposed of low level radioactive waste at several sites in the Atlantic and Pacific Ocean. In 1972 the Environmental Protection Agency was authorized under the Marine Protection Research and Sanctuaries Act (PL-92-532) to regulate all ocean disposal activities. This Act requires EPA to establish a program for reviewing and evaluating ocean dumping permit applications. Before EPA can approve permits for ocean dumping of radioactive waste, it will be necessary to determine how such wastes may affect marine biota. The purpose of this study was to test the feasibility of using a marine coastal worm, Neanthes arenaceodentata, as a cytogenetic model for assessing radiation damage to ocean organisms. Groups of worms were exposed to cobalt-60, then slide preparations were made and scored for gross chromosome aberrations and damage. All the levels of ionizing radiation tested from 180-680 rads were found to cause significant chromosome damage in N. arenaceodentata. The nature of this damage depended on dose, dose-rate and DNA repair capability of the worm. Worms responded to the same dose range as do mice. Since mice are accepted models for studying radiation effects on humans, this study supports the utility of using this species to study radiation effects on marine organisms.

  6. Long-term effects of acute low-dose ionizing radiation on the neonatal mouse heart: a proteomic study.

    PubMed

    Bakshi, Mayur V; Barjaktarovic, Zarko; Azimzadeh, Omid; Kempf, Stefan J; Merl, Juliane; Hauck, Stefanie M; Eriksson, Per; Buratovic, Sonja; Atkinson, Michael J; Tapio, Soile

    2013-11-01

    Epidemiological studies establish that children and young adults are especially susceptible to radiation-induced cardiovascular disease (CVD). The biological mechanisms behind the elevated CVD risk following exposure at young age remain unknown. The present study aims to elucidate the long-term effects of ionizing radiation by studying the murine cardiac proteome after exposure to low and moderate radiation doses. NMRI mice received single doses of total body (60)Co gamma-irradiation on postnatal day 10 and were sacrificed 7 months later. Changes in cardiac protein expression were quantified using isotope-coded protein label and tandem mass spectrometry. We identified 32, 31, 66, and 34 significantly deregulated proteins after doses of 0.02, 0.1, 0.5, and 1.0 Gy, respectively. The four doses shared 9 deregulated proteins. Bioinformatics analysis showed that most of the deregulated proteins belonged to a limited set of biological categories, including metabolic processes, inflammatory response, and cytoskeletal structure. The transcription factor peroxisome proliferator-activated receptor alpha was predicted as a common upstream regulator of several deregulated proteins. This study indicates that both adaptive and maladaptive responses to the initial radiation damage persist well into adulthood. It will contribute to the understanding of the long-term consequences of radiation-induced injury and developmental alterations in the neonatal heart.

  7. [Use of time-of-flight mass spectrometry with ionization division fragments of californium-252 for studying the mechanisms of action of drugs on DNA and its components].

    PubMed

    Sukhodub, L F; Grebenik, L I; Chivanov, V D

    1994-01-01

    Using soft-ionization mass spectrometry (252-Cf particle desorption mass spectrometry, PDMS) a minor adduct of anticancer drug prospidine and deoxyguanosine-5-phosphate (pdG) has been found. It has been shown experimentally that PDMS is very useful for study of biological mixtures as well as mechanisms of interactions between drugs and biomolecules.

  8. Activating tert-butyl hydroperoxide by chelated vanadates for stereoselectively preparing sidechain-functionalized tetrahydrofurans.

    PubMed

    Dönges, Maike; Amberg, Matthias; Niebergall, Mark; Hartung, Jens

    2015-06-01

    tert-Butyl hydroperoxide (TBHP) stereoselectively oxidizes substituted 4-pentenols, when activated by (ethyl)[cis-(piperidine-2,6-diyl)dimethyl] vanadates. The reaction affords (tetrahydrofuran-2-yl)methanols in up to 89% yield, and in stereoselectivity ranging between moderate (cis:trans=32:68) to excellent (>99:1). Correlating structures of 4-pentenols, differing by substitution at tetragonal and trigonal stereocenters, to configuration of products obtained from oxidative cyclization provides a reaction model explaining the origin of stereoselectivity by (i) intramolecular oxygen atom transfer to (ii) a chair-like folded alkenol, being (iii) hydrogen-bonded to one of the two aminodiolate oxygens of the chelated vanadate, having (iv) substituents in the chair-like transition structure preferentially aligned equatorially. Substituents at trigonal stereocenters improve 2,5-cis- and 2,4-trans-selectivity for oxidative 4-pentenol cyclization in case of (Z)-configuration. An (E)-substituent does not alter selectivity exerted by a terminal (Z)-substituent of similar steric size. Larger (E)-groups increase the fraction of 2,5-trans-cyclized products. The reaction model additionally implements results from vanadium-51 NMR spectroscopy and density functional theory. According to theory, the (dialkoxy)(oxo)vanadium substituent exerts in the preferred end-on conformation almost no effect on structure and bonding of the peroxide group in tert-butylperoxy vanadates. Changing conformation to a higher in energy side-on arrangement puts the vanadate-bound tert-butylperoxy group into a position to serve in a concerted reaction as combined electron acceptor and oxygen atom donor.

  9. Detection of OH radical in laser induced photodissociation of tetrahydrofuran at 193 nm

    NASA Astrophysics Data System (ADS)

    SenGupta, Sumana; Upadhyaya, Hari P.; Kumar, Awadhesh; Naik, Prakash D.; Bajaj, Paramanand

    2005-03-01

    On excitation at 193nm, tetrahydrofuran (THF) generates OH as one of the photodissociation products. The nascent energy state distribution of the OH radical was measured employing laser induced fluorescence technique. It is observed that the OH radical is formed mostly in the ground vibrational level, with low rotational excitation (˜3%). The rotational distribution of OH (v″=0,J) is characterized by rotational temperature of 1250±140K. Two spin-orbit states, Π3/22 and Π1/22 of OH are populated statistically. But, there is a preferential population in Λ doublet levels. For all rotational numbers, the Π+2(A') levels are preferred to the Π-2(A″) levels. The relative translational energy associated with the photoproducts in the OH channel is calculated to be 17.4±2.2kcalmol-1, giving an fT value of ˜36%, and the remaining 61% of the available energy is distributed in the internal modes of the other photofragment, i.e., C4H7. The observed distribution of the available energy agrees well with a hybrid model of energy partitioning, predicting an exit barrier of ≈16kcalmol-1. Based on both ab initio molecular orbital calculations and experimental results, a plausible mechanism for OH formation is proposed. The mechanism involves three steps, the C-O bond cleavage of the ring, H atom migration to the O atom, and the C-OH bond scission, in sequence, to generate OH from the ground electronic state of THF. Besides this high energy reaction channel, other photodissociation channels of THF have been identified by detecting the stable products, using Fourier transform infrared and gas chromatography.

  10. High-resolution (e, 2e + ion) study of electron-impact ionization and fragmentation of methane

    SciTech Connect

    Ren, Xueguang Pflüger, Thomas; Weyland, Marvin; Baek, Woon Yong; Rabus, Hans; Ullrich, Joachim; Dorn, Alexander

    2015-05-07

    The ionization and fragmentation of methane induced by low-energy (E{sub 0} = 66 eV) electron-impact is investigated using a reaction microscope. The momentum vectors of all three charged final state particles, two outgoing electrons, and one fragment ion, are detected in coincidence. Compared to the earlier study [Xu et al., J. Chem. Phys. 138, 134307 (2013)], considerable improvements to the instrumental mass and energy resolutions have been achieved. The fragment products CH{sub 4}{sup +}, CH{sub 3}{sup +}, CH{sub 2}{sup +}, CH{sup +}, and C{sup +} are clearly resolved. The binding energy resolution of ΔE = 2.0 eV is a factor of three better than in the earlier measurements. The fragmentation channels are investigated by measuring the ion kinetic energy distributions and the binding energy spectra. While being mostly in consistence with existing photoionization studies the results show differences including missing fragmentation channels and previously unseen channels.

  11. Structural varieties of selectively mixed G- and C-rich short DNA sequences studied with electrospray ionization mass spectrometry.

    PubMed

    Cao, Yanwei; Gao, Shang; Li, Caijin; Yan, Yuting; Wang, Bing; Guo, Xinhua

    2016-10-01

    Short guanine(G)-repeat and cytosine(C)-repeat DNA strands can self-assemble to form four-stranded G-quadruplexes and i-motifs, respectively. Herein, G-rich and C-rich strands with non-G or non-C terminal bases and different lengths of G- or C-repeats are mixed selectively in pH 4.5 and 6.7 ammonium acetate buffer solutions and studied by electrospray ionization mass spectrometry (ESI-MS). Various strand associations corresponding to bi-, tri- and tetramolecular ions are observed in mass spectra, indicating that the formation of quadruplex structures is a random strand by strand association process. However, with increasing incubation time for the mixtures, initially associated hybrid tetramers will transform into self-assembled conformations, which is mainly driven by the structural stability. The melting temperature values of self-assembled quadruplexes suggest that the length of G-repeats or C-repeats shows more significant effect on the stability of quadruplex structures than that of terminal residues. Accordingly, we can obtain the self-associated tetrameric species generated from the mixtures of various homologous G- or C-strands efficiently by altering the length of G- or C-repeats. Our studies demonstrate that ESI-MS is a very direct, fast and sensitive tool to provide significant information on DNA strand associations and stoichiometric transitions, particularly for complex mixtures. Copyright © 2016 John Wiley & Sons, Ltd.

  12. Physics studies with ICARUS and a hybrid ionization and scintillation fiber detector

    SciTech Connect

    Cline, D.B.

    1992-01-01

    We discuss the physics possibilities for the ICARUS detector currently being tested at CERN. The physics potential goes from a massive proton decay detector to the study of solar neutrinos. In addition, the detection of [nu][sub [mu

  13. Distribution study of cisplatin in rat kidney and liver cancer tissues by using liquid chromatography electrospray ionization tandem mass spectrometry.

    PubMed

    Bandu, Raju; Ahn, Hyun Soo; Lee, Joon Won; Kim, Yong Woo; Choi, Seon Hee; Kim, Hak Jin; Kim, Kwang Pyo

    2015-06-01

    A sensitive and rapid liquid chromatography positive ion electrospray ionization tandem mass spectrometric (LC/ESI-MS/MS) method has been developed and validated for the quantitative determination and distribution of cisplatin (CP) in kidney and liver tissues after intravenous administration of drug to adult male Sprague Dawley rats. Oxaliplatin (OXP) was used as an internal standard. The tissue samples were homogenized and extracted using conventional liquid-liquid extraction method with phosphate buffer containing ethyl acetate and then subjected to LC-MS analysis. The chromatographic separation was achieved on an Agilent ZORBAX SB C-18 column (50 × 2.1 mm, 1.8 µm) using the mobile phase consisting of 0.1% formic acid in water (Solvent A) : methanol (Solvent B) (40 : 60; v/v) in an isocratic elution followed by detection with positive ion electrospray ionization tandem mass spectrometry using the transitions of m/z 301 > 265 for CP and m/z 398 > 310 for OXP in multiple reaction monitoring mode. The calibration curve was linear in the range of 5.0-7000 and 10.0-6000 ng/ml for kidney and liver tissue homogenates, respectively. The method revealed good performances in terms of within-batch, between-batch precision (1.31-5.70%) and accuracy (97.0-102.24%) for CP in both kidney and liver tissue homogenates including lower and upper limits of quantification. The recoveries from spiked control samples were >81.0% and >87.0 % for CP and OXP, respectively. Matrix effect was found to be negligible, and the stability data were within the acceptable limits. Further, the validated LC/ES-MS/MS method was successfully applied to investigate the distribution of CP in kidney and liver tissues after intravenous administration of CP to male Sprague Dawley rats. The results showed that the higher amount of CP was distributed in kidney followed by liver, which indicated that CP mainly accumulated in kidney tissues and renal excretion might be a primary and

  14. Stability studies of propoxur herbicide in environmental water samples by liquid chromatography-atmospheric pressure chemical ionization ion-trap mass spectrometry.

    PubMed

    Sun, Lei; Lee, Hian Kee

    2003-10-03

    Liquid chromatography-atmospheric pressure ionization ion-trap mass spectrometry has been investigated for the analysis of polar pesticides in water. The degradation behavior of propoxur, selected as a model pesticide belonging to the N-methylcarbamate group, in various aqueous matrices (Milli-Q water, drinking water, rain water, seawater and river water) was investigated. Two interfaces of atmospheric pressure ionization, atmospheric pressure chemical ionization (APCI) and electrospray ionization (ESI), were compared during the study. Propoxur and its transformation product (N-methylformamide) were best ionized as positive ions with both APCI and ESI, while another transformation product (2-isopropoxyphenol) yielded stronger signals as negative ions only with APCI. In addition, the effects of various pH, matrix type and irradiation sources (sunlight, darkness, indoor lighting and artificial UV lamp) on the chemical degradation (hydrolysis) were also assessed. From the kinetic studies of degradation, it was found that the half-life of propoxur was reduced from 327 to 161 h in Milli-Q water with variation of irradiation conditions from dark to sunlight exposure. Degradation rates largely increased with increasing pH. The half-life of the target compound dissolved in Milli-Q water under darkness decreased from 407 to 3 h when the pH of Milli-Q water was increased from 5 to 8.5. These suggest that hydrolysis of propoxur is light-intensity and pH-dependent. In order to mimic contaminated natural environmental waters, propoxur was spiked into real water samples at 30 microg/l. The degradation of propoxur in such water samples under various conditions were studied in detail and compared. With the ion trap run in a time-scheduled single ion monitoring mode, typical limits of detection of the instrument were in the range of 1-10 microg/l.

  15. Photodegradation of secondary organic aerosol generated from limonene oxidation by ozone studied with chemical ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Pan, X.; Underwood, J. S.; Xing, J.-H.; Mang, S. A.; Nizkorodov, S. A.

    2009-06-01

    Photodegradation of secondary organic aerosol (SOA) prepared by ozone-initiated oxidation of D-limonene is studied with an action spectroscopy approach, which relies on detection of volatile photoproducts with chemical ionization mass-spectrometry as a function of the UV irradiation wavelength. Efficient photodegradation is observed for a broad range of ozone (0.1-300 ppm) and D-limonene (0.02-3 ppm) concentrations used in the preparation of SOA. The observed photoproducts are dominated by oxygenated C1-C3 compounds such as methanol, formic acid, acetaldehyde, acetic acid, and acetone. The irradiation wavelength dependence of the combined yield of the photoproducts closely tracks the absorption spectrum of the SOA material suggesting that photodegradation is not limited to the UV wavelengths. Kinetic simulations suggest that RO2+HO2/RO2 reactions represent the dominant route to photochemically active carbonyl and peroxide species in the limonene SOA prepared in these experiments. Similar photodegradation processes are likely to occur in realistic SOA produced by OH- or O3-initiated oxidation of biogenic volatile organic compounds in clean air.

  16. Photodegradation of secondary organic aerosol generated from limonene oxidation by ozone studied with chemical ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Pan, X.; Underwood, J. S.; Xing, J.-H.; Mang, S. A.; Nizkorodov, S. A.

    2009-02-01

    Photodegradation of secondary organic aerosol (SOA) prepared by ozone-initiated oxidation of D-limonene is studied with an action spectroscopy approach, which relies on detection of volatile photoproducts with chemical ionization mass-spectrometry as a function of the UV irradiation wavelength. Efficient photodegradation is observed for a broad range of ozone and D-limonene concentrations (0.1-300 ppm) used in the preparation of SOA. The observed photoproducts are dominated by oxygenated C1-C3 compounds such as methanol, formic acid, acetaldehyde, acetic acid, and acetone. The irradiation wavelength dependence of the combined yield of the photoproducts closely tracks the absorption spectrum of the SOA material suggesting that photodegradation is not limited to the UV wavelengths. Kinetic simulations suggest that RO2+HO2/RO2 reactions represent the dominant route to photochemically active carbonyl and peroxide species in the limonene SOA material. Similar photodegradation processes are likely to occur in realistic SOA produced by OH- or O3-initiated oxidation of biogenic volatile organic compounds in clean air.

  17. [Good laboratory practice of equilibrium solubility measurement II. Study of pH-dependent solubility of ionizable compounds].

    PubMed

    Völgyi, Gergely; Baka, Edit; Kovács, Márta; Takácsné, Novák Krisztina

    2011-01-01

    In this paper the pH-equilibrium solubility profiles of ionizable drugs are presented. The aim of the present work was to study the validity of the Henderson-Hasselbalch (HH) relationship in the case of structurally diverse weak bases. In the case of monoprotic bases, namely papaverine, promethazine and propafenone the experimental equilibrium solubility data precisely follow the theoretical HH curve until the limit of salt solubility. The common ion effect on salt solubility was found to be significant at low pHs. Deviation from the HH equation in the case of dibasic quetiapine hydrogen fumarate can be easily interpreted with the formation of different salt compositions. The significance of pH control and the effect of the salt form (e.g., fumarate) was also investigated. It is critical that the pKa value and the intrinsic solubility are accurately determined when the HH relationship is used to predict the pH-dependent aqueous solubility of drugs.

  18. Interactions of nucleosides with CrO(4) (2-) and Cr(3+) as studied by electrospray ionization mass spectrometry.

    PubMed

    Frańska, Magdalena; Gierczyk, Karolina

    2008-06-01

    The interactions of CrO(4) (2-) and Cr(3+) with nucleosides studied by electrospray ionization mass spectrometry (ESI-MS) are reported. In water, the nucleosides which do not contain the NH(2) group form the unstable [M+HCrO(4)](-) anion. In the presence of a reducing agent, namely methanol, chromate anion forms stable complexes with nucleosides, [M+CH(3)CrO(4)](-) anions. The fragmentation of [M+CH(3)CrO(4)](-) anions involve elimination of the methanol molecule. Chromium cation-nucleoside complexes were not observed in water. In methanol solutions, adenosine and cytidine form [(M-H)+CrOCH(3)](+) and [(M-H)(2)+Cr](+) ions. Most probably, deprotonated imine tautomers form complexes in which a metal cation is simultaneously coordinated by two nitrogen atoms. Complexes containing chloride anions and a few methanol molecules were observed for other nucleosides. Guanosine and inosine form doubly charged ions of the type [M(2)+CrOCH(3)](2+) that probably contain a bond between the oxygen atom and the chromium cation, (HN(1)--C(6)==O)(2) (....)Cr(3+)).

  19. Molecular Characterization of Organic Aerosol Using Nanospray Desorption/Electrospray Ionization Mass Spectrometry: CalNex 2010 field study

    SciTech Connect

    O'Brien, Rachel E.; Laskin, Alexander; Laskin, Julia; Liu, Shang; Weber, Robin; Russell, Lynn; Goldstein, Allen H.

    2013-04-01

    Aerosol samples from the CalNex 2010 field study were analyzed using high resolution mass spectrometry (HR-MS) coupled to a nanospray-desorption/electrospray ionization (nano-DESI) source. The samples were collected in Bakersfield, CA on June 22-23, 2010. The chemical formulas of over 1300 unique molecular species were detected in the mass range of 50-800 m/z. Our analysis focused on identification of two main groups: compounds containing only carbon, hydrogen, and oxygen (CHO only), and nitrogen-containing organic compounds (NOC). The NOC accounted for 35% (by number) of the compounds observed in the afternoon, and for 59% in the early morning samples. By comparing plausible reactant-product pairs, we propose that over 50% of the NOC in each sample could have been formed through reactions transforming carbonyls into imines. The CHO only compounds were dominant in the afternoon suggesting a photochemical source. The average O:C ratios of all observed compounds were fairly consistent throughout the day, ranging from 0.34 in the early morning to 0.37 at night. We conclude that both photooxidation and ammonia chemistry play important roles in forming the compounds observed in this mixed urban-rural environment.

  20. A study of resveratrol-copper complexes by electrospray ionization mass spectrometry and density functional theory calculations.

    PubMed

    Tamboli, Vajir; Defant, Andrea; Mancini, Ines; Tosi, Paolo

    2011-02-28

    Resveratrol is a polyphenolic compound found in plants and human foods which has shown biological activities including chemoprevention, acting through a mechanism which involves the reduction of Cu(II) species. By electrospray ionization (ESI) mass spectrometry we have produced and detected the resveratrol-copper complexes [Resv+Cu](+), [Resv+Cu+H(2)O](+) and [2Resv+Cu](+) by using a resveratrol/CuSO(4) solution in CH(3)CN/H(2)O. The most stable structures of the detected complexes have been calculated at the B3LYP/6-311G(d) level of theory. Resveratrol interacts with the copper ion through nucleophilic carbon atoms on the aromatic ring and the alkenyl group. The fact that only singly charged ions were observed implies that Cu(II) is reduced to Cu(I) in the ESI process. For investigating the structure-reactivity correlation, we have carried out a similar study on the synthetic analogue dihydroresveratrol (DHResv). For the latter only the [DHResv+Cu](+) complex has been detected. Copyright © 2011 John Wiley & Sons, Ltd.

  1. Laboratory simulation of Kuiper belt object volatile ices under ionizing radiation: CO-N2 ices as a case study.

    PubMed

    Kim, Y S; Zhang, F; Kaiser, R I

    2011-09-21

    The exposure of icy Kuiper belt objects (KBOs) by ionizing radiation was simulated in this case of exposing carbon monoxide-nitrogen (CO-N(2)) ices by energetic electrons. The radiation-induced chemical processing was monitored on-line and in situ via FTIR spectroscopy and quadrupole mass spectrometry. Besides the array of carbon oxides being reproduced as in neat irradiated carbon monoxide (CO) ices studied previously, the radiation exposure at 10 K resulted in the formation of nitrogen-bearing species of isocyanato radical (OCN), linear (l-NCN), nitric oxide (NO), nitrogen dioxide (NO(2)), plus diazirinone (N(2)CO). The infrared assignments of these species were further confirmed by isotopic shifts. The temporal evolution of individual species was found to fit in first-order reaction schemes, prepping up the underlying non-equilibrium chemistry on the formation of OCN, l-NCN, and NO radicals in particular. Also unique to the binary KBO model ices and viable for the future remote detection is diazirinone (N(2)CO) at 1860 cm(-1) (2ν(5)) formed at lower radiation exposure.

  2. Sensitivities of NIH/3T3-derived clonal cell lines to ionizing radiation: Significance for gene transfer studies

    SciTech Connect

    Kasid, U.N.; Weichselbaum, R.R.; Brennan, T.; Mark, G.E.; Dritschilo, A. )

    1989-06-15

    Rodent cells are frequently used as recipients in experiments involving gene transfer, isolation, and characterization. The present studies were designed to investigate the clonal responses to ionizing radiation of NIH/3T3 cells subjected to DNA-mediated gene transfer. Radiation sensitivity (D0) values were determined for the parental NIH/3T3 cell strain, six clonal cell lines transfected with DNA from radiation-resistant human tumor cells, and six nontransfected clonal cell lines. The radiation sensitivities of four transfected and two nontransfected clonal cell lines differed significantly from parental NIH/3T3 cells (P less than 0.05). Detailed karyotype analysis of two nontransfected clonal cell lines with differing radiation sensitivities showed variation in chromosomal composition. Specifically, a minute chromosome was observed to segregate consistently (in 49 of 50 metaphases) with the genome of one NIH/3T3 clone (D0 2.07 Gy) and was completely absent (from 50 metaphases) in another NIH/3T3 clone (D0 1.06 Gy). In the parental NIH/3T3 strain (D0 2.02 Gy) 10% of cells (3 of 30 metaphases) had such minute chromosomes. These findings demonstrate that the clonal cellular heterogeneity of NIH/3T3 cells is characterized by genotypic and phenotypic variations which must be considered in the experimental design involving gene transfer and expression.

  3. Surface modification of hexatriacontane by CF_4 plasmas studied by optical emission and threshold ionization mass spectrometries

    NASA Astrophysics Data System (ADS)

    Poncin-Epaillard, F.; Wang, W.; Ausserré, D.; Scharzenbach, W.; Derouard, J.; Sadeghi, N.

    1998-11-01

    The behavior of tetrafluoromethane microwave plasma (2% argon included) has been studied by emission spectroscopy during the treatment of hexatriacontane, a model for high density polyethylene. The evolution of the densities of F* atoms, and CF, CF^*2, radicals has been followed by using the actinometric technique with 2% argon added to the gas. The surface properties, such as surface energy and surface roughness were correlated to the emission intensity of reactives species in the plasma gas phase. We found that the evolution of the fluorinated species emissions in the plasma gas phase can be a direct indication of the surface modifications by the plasma. A mild exposure to the plasma can result in a great decrease of surface energy corresponding to the fluorination. The surface roughness only changes under drastic plasma conditions. Threshold ionization mass spectroscopy is applied to detect the fluorine atoms and CFx radicals. Time resolved measurements in pulsed plasma, give access to the decay rate of F atoms concentration in the afterglow, and to their sticking coefficient on different surfaces. The influences of the discharge parameters and of the surfaces (metal, silicon or hexatriacontane) in contact with the plasma are investigated. The results show that the plasma generated ions and/or UV radiations highly enhance the reactivity of the F atoms on polymer surface.

  4. A discharge flow-photoionization mass spectrometric study of the FO(X 2 Pi i) radical. Photoionization efficiency spectrum and ionization energy

    NASA Technical Reports Server (NTRS)

    Zhang, Zhengyu; Kuo, Szu-Cherng; Klemm, R. Bruce; Monks, Paul S.; Stief, Louis J.

    1994-01-01

    Photoionization efficiency spectra of FO were measured over the wavelength range 80.0-100.0 nm and in the ionization threshold region, 94.0-100.0 nm, using a discharge flow-photoionization mass spectrometer apparatus coupled to a synchrotron radiation source. FO was generated by the reaction of F2P atoms with NO3 and via a F2O2 discharge. A value of 12.78 +/- 0.03 eV was obtained for the adiabatic ionization energy of FO from photoion thresholds which corresponds to FO(+)(X 3 Sigma -) from FO(X 2 Pi i). These results, which are the first to be obtained by direct Photo-ionization mass spectrometry (PIMS) measurements, corroborate those of a photoelectron spectroscopy (PES) study; however, the ionization energy determined here is free from interferences due to other species which complicated the PES measurement. A value of 109.5 +/- 8.0 kJ/mol for Delta f H 0 298(FO) is computed from the present value of IE(FO) and a previous appearance energy measurement, and a value for the proton affinity of FO is calculated to be 511.5 +/- 10.0 kJ/mol.

  5. A discharge flow-photoionization mass spectrometric study of the FO(X 2 Pi i) radical. Photoionization efficiency spectrum and ionization energy

    NASA Technical Reports Server (NTRS)

    Zhang, Zhengyu; Kuo, Szu-Cherng; Klemm, R. Bruce; Monks, Paul S.; Stief, Louis J.

    1994-01-01

    Photoionization efficiency spectra of FO were measured over the wavelength range 80.0-100.0 nm and in the ionization threshold region, 94.0-100.0 nm, using a discharge flow-photoionization mass spectrometer apparatus coupled to a synchrotron radiation source. FO was generated by the reaction of F2P atoms with NO3 and via a F2O2 discharge. A value of 12.78 +/- 0.03 eV was obtained for the adiabatic ionization energy of FO from photoion thresholds which corresponds to FO(+)(X 3 Sigma -) from FO(X 2 Pi i). These results, which are the first to be obtained by direct Photo-ionization mass spectrometry (PIMS) measurements, corroborate those of a photoelectron spectroscopy (PES) study; however, the ionization energy determined here is free from interferences due to other species which complicated the PES measurement. A value of 109.5 +/- 8.0 kJ/mol for Delta f H 0 298(FO) is computed from the present value of IE(FO) and a previous appearance energy measurement, and a value for the proton affinity of FO is calculated to be 511.5 +/- 10.0 kJ/mol.

  6. Sanitation of chicken eggs by ionizing radiation: HACCP and inactivation studies

    NASA Astrophysics Data System (ADS)

    Verde, S. Cabo; Tenreiro, R.; Botelho, M. L.

    2004-09-01

    The aim of this study is to develop the application of irradiation technology to chicken eggs in order to get a product free of pathogenic microorganisms. Bioburden values of eggs from chickens of different ages ( n=150) were found to not be significantly different ( p<0.05) and an average value of (2.0±0.3). 10 5 cfu/egg was obtained for the shell. Two major microbial groups were characterized in the egg's natural microbiota, no Salmonella or Campylobacter were detected. HACCP studies indicated the feed as a critical point. Dosimetry studies were carried out in a γ facility to find the best geometry and dose rate for irradiation. Whole eggs were artificially contaminated with reference strains of Salmonella typhimurium, Salmonella enteritidis, Campylobacter coli and Campylobacter jejuni and irradiated in the γ facility at sub-lethal doses (0.2-1 kGy) with a dose rate of 1.0 kGy/h. Dvalue varied between 0.31-0.26 kGy and 0.20-0.19 kGy in S. typhimurium and S. enteritidis, and between 0.21-0.18 kGy and 0.07-0.09 in C. coli and C. jejuni, for shell and yolk+white. Using sub-lethal doses up to 5 kGy, the Dvalue of natural microbiota in whole eggs was 1.29 kGy. Results show that low irradiation doses could guarantee egg sanitation.

  7. Ionization potentials of seaborgium

    SciTech Connect

    Johnson, E.; Pershina, V.; Fricke, B.

    1999-10-21

    Multiconfiguration relativistic Dirac-Fock values were calculated for the first six ionization potentials of seaborgium and of the other group 6 elements. No experimental ionization potentials are available for seaborgium. Accurate experimental values are not available for all of the other ionization potentials. Ionic radii for the 4+ through 6+ ions of seaborgium are also presented. The ionization potentials and ionic radii obtained will be used to predict some physiochemical properties of seaborgium and its compounds.

  8. Determination of solubility products of complex compounds of certain lanthanide and actinide diiodies with 18-crown-6 in tetrahydrofuran

    SciTech Connect

    Mikheev, N.B.; Kamenskaya, A.N.; Kulyukhin, S.A.

    1988-09-01

    The existence of divalent americium in a tetrahydrofuran (THF) solution was proved for the first time. The values of the solubility products (SP) of the complex compounds with the composition of MeI{sub 2}{centered dot}18-crown-6 (Me = Sm, Eu, Yb, Am, Cf, Es, Fm) in the THF solutions were determined by the cocrystallization method. The SP values obtained are within (5.9-7.9){centered dot}10{sup {minus}12} and are close to the SP value for SrI{sub 2}{centered dot}10{sup {minus}12}, which indicates a similarity in the properties of these elements.

  9. Cobalt(II) chloride adducts with acetonitrile, propan-2-ol and tetrahydrofuran: considerations on nuclearity, reactivity and synthetic applications.

    PubMed

    Stinghen, Danilo; Rüdiger, André Luis; Giese, Siddhartha O K; Nunes, Giovana G; Soares, Jaísa F; Hughes, David L

    2017-02-01

    High-spin cobalt(II) complexes are considered useful building blocks for the synthesis of single-molecule magnets (SMM) because of their intrinsic magnetic anisotropy. In this work, three new cobalt(II) chloride adducts with labile ligands have been synthesized from anhydrous CoCl2, to be subsequently employed as starting materials for heterobimetallic compounds. The products were characterized by elemental, spectroscopic (EPR and FT-IR) and single-crystal X-ray diffraction analyses. trans-Tetrakis(acetonitrile-κN)bis(tetrahydrofuran-κO)cobalt(II) bis[(acetonitrile-κN)trichloridocobaltate(II)], [Co(C2H3N)4(C4H8O)2][CoCl3(C2H3N)]2, (1), comprises mononuclear ions and contains both acetonitrile and tetrahydrofuran (thf) ligands, The coordination polymer catena-poly[[tetrakis(propan-2-ol-κO)cobalt(II)]-μ-chlorido-[dichloridocobalt(II)]-μ-chlorido], [Co2Cl4(C3H8O)4], (2'), was prepared by direct reaction between anhydrous CoCl2 and propan-2-ol in an attempt to rationalize the formation of the CoCl2-alcohol adduct (2), probably CoCl2(HO(i)Pr)m. The binuclear complex di-μ-chlorido-1:2κ(4)Cl:Cl-dichlorido-2κ(2)Cl-tetrakis(tetrahydrofuran-1κO)dicobalt(II), [Co2Cl4(C4H8O)4], (3), was obtained from (2) after recrystallization from tetrahydrofuran. All three products present cobalt(II) centres in both octahedral and tetrahedral environments, the former usually less distorted than the latter, regardless of the nature of the neutral ligand. Product (2') is stabilized by an intramolecular hydrogen-bond network that appears to favour a trans arrangement of the chloride ligands in the octahedral moiety; this differs from the cis disposition found in (3). The expected easy displacement of the bound solvent molecules from the metal coordination sphere makes the three compounds good candidates for suitable starting materials in a number of synthetic applications.

  10. Gradient HPLC separation of dehydroepiandrosterone (DHEA) from its metabolites and biological congeners: role of tetrahydrofuran in the chromatographic mechanism.

    PubMed

    Gergely, András; Horváth, Péter; Szász, György; Veress, Gábor

    2009-08-01

    A three-step gradient reversed-phase high-performance liquid chromatography (RP-HPLC) method was developed for the separation of dehydroepiandrosterone (DHEA), its sulfate ester (DHEA-S), its three C7-oxidized metabolites (7alphaOH-DHEA, 7betaOH-DHEA, 7-keto-DHEA), and its biosynthetic congeners (androstenedione, testosterone, estradiol, pregnenolone). This new method allows the quantitative characterization of DHEA metabolism and biosynthetic transformation under given physiological, pathological, or therapeutically influenced circumstances. Tetrahydrofuran probably acts as a proton acceptor coadsorbent, while isopropanol behaves as a proton donor during the separation of testosterone, estradiol, and the stereoisomers of 7-OH-DHEA.

  11. Ionizing radiation induces structural and functional damage on the molecules of rat brain homogenate membranes: a Fourier transform infrared (FT-IR) spectroscopic study.

    PubMed

    Demir, Pinar; Akkas, Sara B; Severcan, Mete; Zorlu, Faruk; Severcan, Feride

    2015-01-01

    Humans can be exposed to ionizing radiation, due to various reasons, whose structural effects on biological membranes are not well defined. The current study aims to understand the ionizing radiation-induced structural and functional alterations in biomolecules of brain membranes using Fourier transform infrared (FT-IR) spectroscopy using rat animal models. For this purpose, 1000 cGy of ionizing radiation was specifically directed to the head of Sprague Dawley rats. The rats were decapitated after 24 h. The results revealed that the lipid-to-protein ratio decreased and that irradiation caused lipid peroxidation and increases in the amounts of olefinic =CH, carbonyl, and methylene groups of lipids. In addition, ionizing radiation induced a decrease in membrane fluidity, disordering of membrane lipids, strengthening of the hydrogen bonding of the phosphate groups of lipid head-groups, and weakening in the hydrogen bonding of the interfacial carbonyl groups of lipids. Radiation further caused significant decrements in the α-helix and turns, and significant increments in the β-sheet and random coil contents in the protein structure. Hierarchical cluster analyses, performed in the whole region (3030-1000 cm(-1)), lipid (3030-2800 cm(-1)), and protein (1700-1600 cm(-1)) regions separately, successfully differentiated the control and irradiated groups of rat brain membranes and showed that proteins in the membranes are affected more than lipids from the damages induced with ionizing radiation. As a result, the current study showed that FT-IR spectroscopy can be used successfully as a novel method to monitor radiation-induced alterations on biological membranes.

  12. Gas-phase dissociation study of erythrinian alkaloids by electrospray ionization mass spectrometry and computational methods.

    PubMed

    Guaratini, T; Feitosa, L G P; Silva, D B; Lopes, N P; Lopes, J L C; Vessecchi, R

    2017-09-01

    Alkaloids from plants of the genus Erythrina display important biological activities, including anxiolytic action. Characterization of these alkaloids by mass spectrometry (MS) has contributed to the construction of a spectral library, has improved understanding of their structures and has supported the proposal of fragmentation mechanisms in light of density functional calculations. In this study, we have used low-resolution and high-resolution MS(n) analyses to investigate the fragmentation patterns of erythrinian alkaloids; we have employed the B3LYP/6-31+G(d,p) model to obtain their reactive sites. To suggest the fragmentation mechanism of these alkaloids, we have studied their protonation sites by density functional calculation, and we have obtained their molecular electrostatic potential map and their gas-phase basicity values. These analyses have indicated the most basic sites on the basis of the proton affinities of the nitrogen and oxygen atoms. The protonated molecules were generated by two major fragmentations, namely, neutral loss of CH3 OH followed by elimination of H2 O. High-resolution analysis confirmed elimination of NH3 by comparison with the losses of H2 and •CH3 . NH3 was eliminated from compounds that did not bear a substituent on ring C. The benzylic carbocation initiated the dissociation mechanism, and the first reaction involved charge transfer from a lone pair of electrons in the oxygen atoms. The second reaction consisted of ring contraction with loss of a CO molecule. The presence of hydroxy and epoxy groups could change the intensity or the occurrence of the fragmentation pathways. Given that erythrinian alkaloids are applied in therapeutics and are promising leads for the development of new drugs, the present results could aid identification of several analogues of these alkaloids in biological samples and advance pharmacokinetic studies of new plant derivatives based on MS(n) and MS/MS analyses. Copyright © 2017 John Wiley & Sons

  13. Two decades of studying non-covalent biomolecular assemblies by means of electrospray ionization mass spectrometry

    PubMed Central

    Hilton, Gillian R.; Benesch, Justin L. P.

    2012-01-01

    Mass spectrometry (MS) is a recognized approach for characterizing proteins and the complexes they assemble into. This application of a long-established physico-chemical tool to the frontiers of structural biology has stemmed from experiments performed in the early 1990s. While initial studies focused on the elucidation of stoichiometry by means of simple mass determination, developments in MS technology and methodology now allow researchers to address questions of shape, inter-subunit connectivity and protein dynamics. Here, we chart the remarkable rise of MS and its application to biomolecular complexes over the last two decades. PMID:22319100

  14. A Study of Heterogeneous Catalysis by Nanoparticle-Embedded Paper-Spray Ionization Mass Spectrometry.

    PubMed

    Banerjee, Shibdas; Basheer, Chanbasha; Zare, Richard N

    2016-10-04

    We have developed nanoparticle-embedded paper-spray mass spectrometry for studying three types of heterogeneously catalyzed reactions: 1) Palladium-nanoparticle-catalyzed Suzuki cross-coupling reactions, 2) palladium- or silver-nanoparticle-catalyzed 4-nitrophenol reduction, and 3) gold-nanoparticle-catalyzed glucose oxidation. These reactions were almost instantaneous on the nanocatalyst-embedded paper, which subsequently transferred the transient intermediates and products to a mass spectrometer for their detection. This in situ method of capturing transient intermediates and products from heterogeneous catalysis is highly promising for investigating the mechanism of catalysis and rapidly screening catalytic activity under ambient conditions.

  15. [Studies on urease from the seeds of Citrullus vulgaris: action of chemical agents and ionizing radiations].

    PubMed

    Hargreaves, A B; Marcondes, N; Elias, C A

    1976-01-01

    Urease obtained from seeds of Citrullus vulgaris fruits has been studied under three points of view: a) the effect of the urea analogs acetamide and hydroxi-urea on the enzyme kinetic b) the action of the sulfhydryl reagents and the reactivation agents on the enzyme c) the effect of X-rays and the protective action of the cysteamine. The Berthelot reaction for the determination of the liberated NH3 was used enzyme activity. Acetamide has no effect on urease kinetic. Hidroxy-urea which produces a typical green color when it is mixed with the Berthelot reagents at high concentrations, when properly diluted acts a aompetitive inhibitor of urease. Spectrophotometric experiments suggest that the studied urease decomposes hydroxi-urea with liberation of hydroxilamine. The sulphydril reagent, p-hydroxi-mercuribenzoate inhibits the enzime. Cysteine and dithiotreitol reactivate the enzyme activity in no more then 50% even when excess of the substances is used. Probably only in the first step of the urea hydrolysis, the enzyme behaves as a typical SH-enzyme. Urease is very sensitive to X-rays. Cysteamine acts as a protective agent of the enzyme. Dithiotreitol reinforces this protective action. This effect is clearly observed when the Fisbein catalytic method for urease is employed.

  16. Ionization efficiency studies with charge breeder and conventional electron cyclotron resonance ion source

    SciTech Connect

    Koivisto, H. Tarvainen, O.; Toivanen, V.; Komppula, J.; Kronholm, R.; Lamy, T.; Angot, J.; Delahaye, P.; Maunoury, L.; Patti, G.; Standylo, L.; Steczkiewicz, O.; Choinski, J.

    2014-02-15

    Radioactive Ion Beams play an increasingly important role in several European research facility programs such as SPES, SPIRAL1 Upgrade, and SPIRAL2, but even more for those such as EURISOL. Although remarkable advances of ECRIS charge breeders (CBs) have been achieved, further studies are needed to gain insight on the physics of the charge breeding process. The fundamental plasma processes of charge breeders are studied in the frame of the European collaboration project, EMILIE, for optimizing the charge breeding. Important information on the charge breeding can be obtained by conducting similar experiments using the gas mixing and 2-frequency heating techniques with a conventional JYFL 14 GHz ECRIS and the LPSC-PHOENIX charge breeder. The first experiments were carried out with noble gases and they revealed, for example, that the effects of the gas mixing and 2-frequency heating on the production of high charge states appear to be additive for the conventional ECRIS. The results also indicate that at least in the case of noble gases the differences between the conventional ECRIS and the charge breeder cause only minor impact on the production efficiency of ion beams.

  17. Study of (α , p) and (α , n) reactions with a Multi-Sampling Ionization Chamber

    NASA Astrophysics Data System (ADS)

    Avila, M. L.; Rehm, K. E.; Almaraz-Calderon, S.; Ayangeakaa, A. D.; Dickerson, C.; Hoffman, C. R.; Jiang, C. L.; Kay, B. P.; Lai, J.; Nusair, O.; Pardo, R. C.; Santiago-Gonzalez, D.; Talwar, R.; Ugalde, C.

    2017-07-01

    A large number of (α , p) and (α , n) reactions are known to play a fundamental role in nuclear astrophysics. This work presents a novel technique to study these reactions with the active target system MUSIC whose segmented anode allows the investigation of a large energy range of the excitation function with a single beam energy. In order to verify the method, we performed direct measurements of the previously measured reactions 17O (α , n) 20Ne, 23Na (α , p) 26Mg, and 23Na (α , n) 26Al. These reactions were investigated in inverse kinematics using 4He gas in the detector to study the excitation functions in the energy range of about 2-6 MeV in the center of mass. We found good agreement between the cross sections of the 17O (α , n) 20Ne reaction measured in this work and previous measurements. Furthermore we have successfully performed a simultaneous measurement of the 23Na (α , p) 26Mg and 23Na (α , n) 26Al reactions.

  18. Ionization Energies of Lanthanides

    ERIC Educational Resources Information Center

    Lang, Peter F.; Smith, Barry C.

    2010-01-01

    This article describes how data are used to analyze the pattern of ionization energies of the lanthanide elements. Different observed pathways of ionization between different ground states are discussed, and the effects of pairing, exchange, and orbital interactions on ionization energies of the lanthanides are evaluated. When all the above…

  19. Ionization Energies of Lanthanides

    ERIC Educational Resources Information Center

    Lang, Peter F.; Smith, Barry C.

    2010-01-01

    This article describes how data are used to analyze the pattern of ionization energies of the lanthanide elements. Different observed pathways of ionization between different ground states are discussed, and the effects of pairing, exchange, and orbital interactions on ionization energies of the lanthanides are evaluated. When all the above…

  20. Wavelength dependent photoelectron circular dichroism of limonene studied by femtosecond multiphoton laser ionization and electron-ion coincidence imaging

    NASA Astrophysics Data System (ADS)

    Rafiee Fanood, Mohammad M.; Janssen, Maurice H. M.; Powis, Ivan

    2016-09-01

    Enantiomers of the monoterpene limonene have been investigated by (2 + 1) resonance enhanced multiphoton ionization and photoelectron circular dichroism employing tuneable, circularly polarized femtosecond laser pulses. Electron imaging detection provides 3D momentum measurement while electron-ion coincidence detection can be used to mass-tag individual electrons. Additional filtering, by accepting only parent ion tagged electrons, can be then used to provide discrimination against higher energy dissociative ionization mechanisms where more than three photons are absorbed to better delineate the two photon resonant, one photon ionization pathway. The promotion of different vibrational levels and, tentatively, different electronic ion core configurations in the intermediate Rydberg states can be achieved with different laser excitation wavelengths (420 nm, 412 nm, and 392 nm), in turn producing different state distributions in the resulting cations. Strong chiral asymmetries in the lab frame photoelectron angular distributions are quantified, and a comparison made with a single photon (synchrotron radiation) measurement at an equivalent photon energy.

  1. Ionization-induced π → H site-switching in phenol-CH4 complexes studied using IR dip spectroscopy.

    PubMed

    Miyazaki, Mitsuhiko; Takeda, Akihiro; Schmies, Matthias; Sakai, Makoto; Misawa, Kentaro; Ishiuchi, Shun-ichi; Michels, François; Müller-Dethlefs, Klaus; Dopfer, Otto; Fujii, Masaaki

    2014-01-07

    IR spectra of phenol-CH4 complexes generated in a supersonic expansion were measured before and after photoionization. The IR spectrum before ionization shows the free OH stretching vibration (ν(OH)) and the structure of neutral phenol-CH4 in the electronic ground state (S0) is assigned to a π-bound geometry, in which the CH4 ligand is located above the phenol ring. The IR spectrum after ionization to the cationic ground state (D0) exhibits a red shifted ν(OH) band assigned to a hydrogen-bonded cationic structure, in which the CH4 ligand binds to the phenolic OH group. In contrast to phenol-Ar/Kr, the observed ionization-induced π → H migration has unity yield for CH4. This difference is attributed to intracluster vibrational energy redistribution processes.

  2. Analytical study on the influence of nonequilibrium ionization for current flow pattern and flow field of MPD arcjets

    NASA Astrophysics Data System (ADS)

    Kimura, Itsuro; Shoji, Tsunetake

    1990-07-01

    The effect of non-equilibrium ionization on a one-dimensional supersonic self-field MPD flow, which starts from the point of Mach number 1, is analyzed taking ionization and recombination rate-equations and electron energy equation into consideration. It was observed generally that for given inlet boundary conditions and a total discharge current, the solution exists in a limited region of propellant flow rate and the required electrode becomes longer for lower propellant flow rate, as in the cases of frozen or thermal-equilibrium flow. Based on the calculated results with argon or hydrogen propellant, it was shown that a remarkable deviation from ionization equilibrium appears in the course of plasma acceleration, when the propellant flow rate is near the lower limit, and that for molecular species hydrogen, current concentration on the inlet part, observed in the case of argon, is removed by the influence of dissociation process.

  3. Theoretical and experimental (e ,2 e ) study of electron-impact ionization of laser-aligned Mg atoms

    NASA Astrophysics Data System (ADS)

    Amami, Sadek; Murray, Andrew; Stauffer, Al; Nixon, Kate; Armstrong, Gregory; Colgan, James; Madison, Don

    2014-12-01

    We have performed calculations of the fully differential cross sections for electron-impact ionization of magnesium atoms. Three theoretical approximations, the time-dependent close coupling, the three-body distorted wave, and the distorted wave Born approximation, are compared with experiment in this article. Results will be shown for ionization of the 3 s ground state of Mg for both asymmetric and symmetric coplanar geometries. Results will also be shown for ionization of the 3 p state which has been excited by a linearly polarized laser which produces a charge cloud aligned perpendicular to the laser beam direction and parallel to the linear polarization. Theoretical and experimental results will be compared for several different alignment angles, both in the scattering plane as well as in the plane perpendicular to the incident beam direction.

  4. Physics studies with ICARUS and a hybrid ionization and scintillation fiber detector

    SciTech Connect

    Cline, D.B.

    1992-12-31

    We discuss the physics possibilities for the ICARUS detector currently being tested at CERN. The physics potential goes from a massive proton decay detector to the study of solar neutrinos. In addition, the detection of {nu}{sub {mu}} {yields} {nu}{sub {tau}} and {nu}{sub e} {yields} {nu}{sub {tau}} will be possible with such a detector. One major topic involves the possibility of a complete determination of the MSW solar neutrino parameters with the ICARUS. The possibility of detecting WIMPS with a scintillating fiber liquid Argon (Ar) detector or fiber Xenon (Xe) detector doped with Ar is also described. Some comments on the measurement of the {sup 42}Ar level from an experiment at the Gran Sasso will be made.

  5. Ammonia as a case study for the spontaneous ionization of a simple hydrogen-bonded compound.

    PubMed

    Palasyuk, Taras; Troyan, Ivan; Eremets, Mikhail; Drozd, Vadym; Medvedev, Sergey; Zaleski-Ejgierd, Patryk; Magos-Palasyuk, Ewelina; Wang, Hongbo; Bonev, Stanimir A; Dudenko, Dmytro; Naumov, Pavel

    2014-03-24

    Modern ab initio calculations predict ionic and superionic states in highly compressed water and ammonia. The prediction apparently contradicts state-of-the-art experimentally established phase diagrams overwhelmingly dominated by molecular phases. Here we present experimental evidence that the threshold pressure of ~120 GPa induces in molecular ammonia the process of autoionization to yet experimentally unknown ionic compound--ammonium amide. Our supplementary theoretical simulations provide valuable insight into the mechanism of autoionization showing no hydrogen bond symmetrization along the transformation path, a remarkably small energy barrier between competing phases and the impact of structural rearrangement contribution on the overall conversion rate. This discovery is bridging theory and experiment thus opening new possibilities for studying molecular interactions in hydrogen-bonded systems. Experimental knowledge on this novel ionic phase of ammonia also provides strong motivation for reconsideration of the theory of molecular ice layers formation and dynamics in giant gas planets.

  6. D-region differential-phase measurements and ionization variability studies

    NASA Technical Reports Server (NTRS)

    Weiland, R. M.; Bowhill, S. A.

    1978-01-01

    Measurements of electron densities in the D region are made by the partial-reflection differential-absorption and differential-phase techniques. The differential-phase data are obtained by a hard-wired phase-measuring system. Electron-sensity profiles obtained by the two techniques on six occasions are plotted and compared. Electron-density profiles obtained at the same time on 30 occasions during the years 1975 through 1977 are averaged to form a single profile for each technique. The effect of varying the assumed collision-frequency profile on these averaged profiles is studied. Time series of D-region electron-sensity data obtained by 3.4 minute intervals on six days during the summer of 1977 are examined for wave-like disturbances and tidal oscillations.

  7. Detection of ionizing radiations by studying ceramic tiles materials using thermoluminescence technique

    NASA Astrophysics Data System (ADS)

    Mandavia, H. C.; Murthy, K. V. R.; Purohit, R. U.

    2017-05-01

    Natural background radiation comes from two primary sources: cosmic radiation and terrestrial sources. Our natural environment has both livings and non-livings like - Sun, Moon, Sky, Air, Water, Soil, Rivers, Mountains, Forests, besides plants and animals. The worldwide average background dose for a human being is about 2.4 millisievert (mSv) per year. This exposure is mostly from cosmic radiation and natural radionuclides in the environment. The Earth, and all living things on it, are constantly bombarded by radiation from outer space. This radiation primarily consists of positively charged ions from protons to iron and larger nuclei derived sources outside our solar system. This radiation interacts with atoms in the atmosphere to create secondary radiation, including X-rays, muons, protons, alpha particles, pions, electrons, and neutrons. The present study discusses the utility of ceramic tiles as radiation dosimeters in case of nuclear fallout. Many flooring materials most of them are in natural form are used to manufacture floor tiles for household flooring purpose. Many natural minerals are used as the raw materials required for the manufacturing ceramic ware. The following minerals are used to manufacturing the ceramic tiles i.e. Quartz, Feldspar, Zircon, Talc, Grog, Alumina oxide, etc. Most of the minerals are from Indian mines of Gujarat and Rajasthan states, some of are imported from Russian subcontinent. The present paper reports the thermoluminescence dosimetry Study of Feldspar and Quartz minerals collected from the ceramic tiles manufacturing unit, Morbi. The main basis in the Thermoluminescence Dosimetry (TLD) is that TL output is directly proportional to the radiation dose received by the phosphor and hence provides the means of estimating unknown radiations from environment.

  8. On interfacial properties of tetrahydrofuran: Atomistic and coarse-grained models from molecular dynamics simulation.

    PubMed

    Garrido, J M; Algaba, J; Míguez, J M; Mendiboure, B; Moreno-Ventas Bravo, A I; Piñeiro, M M; Blas, F J

    2016-04-14

    We have determined the interfacial properties of tetrahydrofuran (THF) from direct simulation of the vapor-liquid interface. The molecules are modeled using six different molecular models, three of them based on the united-atom approach and the other three based on a coarse-grained (CG) approach. In the first case, THF is modeled using the transferable parameters potential functions approach proposed by Chandrasekhar and Jorgensen [J. Chem. Phys. 77, 5073 (1982)] and a new parametrization of the TraPPE force fields for cyclic alkanes and ethers [S. J. Keasler et al., J. Phys. Chem. B 115, 11234 (2012)]. In both cases, dispersive and coulombic intermolecular interactions are explicitly taken into account. In the second case, THF is modeled as a single sphere, a diatomic molecule, and a ring formed from three Mie monomers according to the SAFT-γ Mie top-down approach [V. Papaioannou et al., J. Chem. Phys. 140, 054107 (2014)]. Simulations were performed in the molecular dynamics canonical ensemble and the vapor-liquid surface tension is evaluated from the normal and tangential components of the pressure tensor along the simulation box. In addition to the surface tension, we have also obtained density profiles, coexistence densities, critical temperature, density, and pressure, and interfacial thickness as functions of temperature, paying special attention to the comparison between the estimations obtained from different models and literature experimental data. The simulation results obtained from the three CG models as described by the SAFT-γ Mie approach are able to predict accurately the vapor-liquid phase envelope of THF, in excellent agreement with estimations obtained from TraPPE model and experimental data in the whole range of coexistence. However, Chandrasekhar and Jorgensen model presents significant deviations from experimental results. We also compare the predictions for surface tension as obtained from simulation results for all the models with

  9. On interfacial properties of tetrahydrofuran: Atomistic and coarse-grained models from molecular dynamics simulation

    NASA Astrophysics Data System (ADS)

    Garrido, J. M.; Algaba, J.; Míguez, J. M.; Mendiboure, B.; Moreno-Ventas Bravo, A. I.; Piñeiro, M. M.; Blas, F. J.

    2016-04-01

    We have determined the interfacial properties of tetrahydrofuran (THF) from direct simulation of the vapor-liquid interface. The molecules are modeled using six different molecular models, three of them based on the united-atom approach and the other three based on a coarse-grained (CG) approach. In the first case, THF is modeled using the transferable parameters potential functions approach proposed by Chandrasekhar and Jorgensen [J. Chem. Phys. 77, 5073 (1982)] and a new parametrization of the TraPPE force fields for cyclic alkanes and ethers [S. J. Keasler et al., J. Phys. Chem. B 115, 11234 (2012)]. In both cases, dispersive and coulombic intermolecular interactions are explicitly taken into account. In the second case, THF is modeled as a single sphere, a diatomic molecule, and a ring formed from three Mie monomers according to the SAFT-γ Mie top-down approach [V. Papaioannou et al., J. Chem. Phys. 140, 054107 (2014)]. Simulations were performed in the molecular dynamics canonical ensemble and the vapor-liquid surface tension is evaluated from the normal and tangential components of the pressure tensor along the simulation box. In addition to the surface tension, we have also obtained density profiles, coexistence densities, critical temperature, density, and pressure, and interfacial thickness as functions of temperature, paying special attention to the comparison between the estimations obtained from different models and literature experimental data. The simulation results obtained from the three CG models as described by the SAFT-γ Mie approach are able to predict accurately the vapor-liquid phase envelope of THF, in excellent agreement with estimations obtained from TraPPE model and experimental data in the whole range of coexistence. However, Chandrasekhar and Jorgensen model presents significant deviations from experimental results. We also compare the predictions for surface tension as obtained from simulation results for all the models with

  10. Effect of ionizing radiation on the primate pancreas: an endocrine and morphologic study

    SciTech Connect

    Du Toit, D.F.; Heydenrych, J.J.; Smit, B.; Zuurmond, T.; Louw, G.; Laker, L.; Els, D.; Weideman, A.; Wolfe-Coote, S.; Du Toit, L.B.

    1987-01-01

    In this study we evaluated the endocrine, biochemical, and haematological derangements as well as pancreatic and histological changes of the bonemarrow in the primate following external fractionated subtotal marrow irradiation without bonemarrow reconstitution. The irradiation was administered in preparation for pancreatic transplantation. Two groups of animals (ten in each group) received 800 rad (8 Gy) and 1000 rad (10 Gy) respectively over 4 to 5 weeks. A maximum of 200 rads (2 Gy) were administered weekly as photons from a 6 MV linear accelerator. During irradiation the animals remained normoglycaemic in the presence of transiently elevated liver enzymes and serum amylase values, which returned to normal on completion of the irradiation. Insulin release was significantly reduced in both groups during irradiation and was associated with minimally decreased K-values in the presence of mild glucose intolerance. Pancreatic light morphologic changes included structural changes of both exocrine and endocrine elements and included necrosis of the islet cells and acinar tissue. Islet histology demonstrated striking cytocavitary network changes of alpha and beta cells, including degranulation, vacuolization, mitochondrial destruction, and an increase in lysosomes. A hypoplastic bonemarrow ranging from moderate to severe was observed in all irradiated recipients. Near total fractionated body irradiation in the primate is therefore associated with elevated liver enzymes, pancytopenia, transient hyperamylasaemia, hypoinsulinaemia, a varying degree of pancreatitis, and bonemarrow hypoplasia.

  11. Ionized Gas Outflows in AGN: A Detailed Study of their Physical Properties from the MAGNUM Survey

    NASA Astrophysics Data System (ADS)

    Mingozzi, Matilde; Marconi, Alessandro; Venturi, Giacomo; Cresci, Giovanni; Risaliti, Guido; Mannucci, Filippo; Carniani, Stefano

    2017-07-01

    I present an overview of our results from the MAGNUM survey (Measuring Active Galactic Nuclei Under MUSE Microscope), which aims at studying in detail the properties of AGN, including their interaction with the host galaxy (e.g., tentative evidence of "positive feedback"), and the ISM gas properties, both in the ionised gas with VLT/MUSE and in the molecular gas with ALMA. Nearby galaxies are the ideal laboratories for such a detailed analysis, thanks to the spatial information offered by their vicinity (the average spatial resolution is 50 pc). Data have been obtained for ten local galaxies so far, including the famous NGC 1068, Circinus and NGC 4945. Thanks to its unique combination of large field of view (1'x1') and spectral coverage (4800‑9300 Å), MUSE has allowed us to probe the kinematical and spatial structure of the kpc-scale AGN-driven outflows, to construct spatially resolved BPT diagrams to spatially disentangle the main ionisation mechanism and constrain the physical properties of the ISM (reddening, density, temperature, ionisation potential, shock excitation etc). The intrinsic outflow 3D shape and the physical properties of the gas can then be analysed in details through kinematical and photoionisation models.

  12. Studies of antibiotic resistant mutants of Bacteroides fragilis obtained by Cs-137 ionizing radiation

    SciTech Connect

    Azghani, A.O.

    1986-01-01

    The genus Bacteroides is an obligate anaerobic bacillus normally found in the upper respiratory tract, the colon, and the genitourinary system. The project reported here was undertaken because of the high frequency of hospital infections attributed to B. fragilis, and the increased resistance of the bacteria to commonly used antibiotics. Cs-137 gamma irradiation was used to induce antibiotic resistant mutants in B. fragilis in the presence of Escherichia coli B/r membrane fragments, employed as reducing agent. Based on a dose-survival curve, an effective radiation dose of 1.54 x 10/sup 4/R (3.99 C/Kg) was used to induce mutations to rifampicin and tetracycline resistance in the test organism. The antibiotic resistant mutants of B. fragilis were utilized to reveal the mechanism by which this group of organisms becomes resistant to select chemotherapeutic agents. Studies on tetracycline resistant mutants of B. fragilis isolated after irradiation, suggest that the resistance to this antibiotic is associated with the outer membrane permeability. The difference in inhibitory action of rifampicin on RNA polymerase activity, from rifampicin sensitive and resistant strains of B. fragilis, reveals that this enzyme is a possible suitable target for inhibition of bacterial growth in anaerobes by rifampicin.

  13. Summary of Building Protection Factor Studies for External Exposure to Ionizing Radiation

    SciTech Connect

    Dillon, Michael B.; Kane, Jave; Nasstrom, John; Homann, Steve; Pobanz, Brenda

    2016-02-17

    Radiation dose assessments are used to help inform decisions to minimize health risks in the event of an atmospheric release of radioactivity including, for example, from a Radiological Dispersal Device, an Improvised Nuclear Device detonation, or a Nuclear Power Plant accident. During these incidents, radiation dose assessments for both indoor and outdoor populations are needed to make informed decisions. These dose assessments inform emergency plans and decisions including, for example, identifying areas in which people should be sheltered and determining when controlled population evacuations should be made. US dose assessment methodologies allow consideration of the protection, and therefore dose reduction, that buildings provide their occupants. However, these methodologies require an understanding of the protection provided by various building types that is currently lacking. To help address this need, Lawrence Livermore National Laboratory, in cooperation with Sandia National Laboratories and the Nuclear Regulatory Commission, was tasked with (a) identifying prior building protection studies, (b) extracting results relevant to US building construction, and (c) summarizing building protection by building type. This report focuses primarily on the protection against radiation from outdoor fallout particles (external gamma radiation).

  14. Molecular recognition of T:G mismatched base pairs in DNA as studied by electrospray ionization mass spectrometry.

    PubMed

    Riccardi Sirtori, Federico; Aldini, Giancarlo; Colombo, Maristella; Colombo, Nicoletta; Malyszko, Jan; Vistoli, Giulio; D'Alessio, Roberto

    2012-06-01

    Postreplicative mismatch repair (MMR) is a cellular system involved in the recognition and correction of DNA polymerase errors that escape detection in proofreading. Of the various mismatched bases, T:G pairing in DNA is one of the more common mutations leading to the formation of tumors in humans. In addition, the absence of the MMR system can generate resistance to several chemotherapeutic agents, particularly DNA-damaging substances. The main purpose of this study was the setup and validation of an electrospray ionization (ESI) mass spectrometry method for the identification of small molecules that are able to recognize T:G mismatches in DNA targets. These findings could be useful for the discovery of new antitumor drugs. The analytical method is based on the ability of electrospray to preserve the noncovalent adducts present in solution and transfer them to the gas phase. Lexitropsin derivatives (polyimidazole compounds) have been previously described as selective for T:G mismatch binding by NMR and ITC studies. We synthesized and tested various polyimidazole derivatives, one of which in particular (NMS-057) showed a higher affinity for an oligonucleotide DNA sequence containing a T:G mismatched base pair. To rationalize these findings, molecular docking studies were performed using available NMR structures. Moreover, ESI-MS experiments, performed on an orbitrap mass spectrometer, highlighted the formation of heterodimeric complexes between DNA sequences, distamycin A, and polyimidazole compounds. Our results confirm that this ESI method could be a valuable tool for the identification of new molecules able to specifically recognize T:G mismatched base pairs.

  15. Fluid hydrogen at high density - Pressure ionization

    NASA Technical Reports Server (NTRS)

    Saumon, Didier; Chabrier, Gilles

    1992-01-01

    The Helmholtz-free-energy model for nonideal mixtures of hydrogen atoms and molecules by Saumon and Chabrier (1991) is extended to describe dissociation and ionization in similar mixtures in chemical equilibrium. A free-energy model is given that describes partial ionization in the pressure and temperature ionization region. The plasma-phase transition predicted by the model is described for hydrogen mixtures including such components as H2, H, H(+), and e(-). The plasma-phase transition has a critical point at Tc = 15,300 K and Pc = 0.614 Mbar, and thermodynamic instability is noted in the pressure-ionization regime. The pressure dissociation and ionization of fluid hydrogen are described well with the model yielding information on the nature of the plasma-phase transition. The model is shown to be valuable for studying dissociation and ionization in astrophysical objects and in high-pressure studies where pressure and temperature effects are significant.

  16. Electronic Absorption Spectra and Carbonyl Wagging Potential Energy Functions for Cyclobutanone, Cyclopentanone and Tetrahydrofuran-3-one in their S1(n, pi*) Excited States

    NASA Astrophysics Data System (ADS)

    Lee, Soono; Laane, Jaane

    1999-10-01

    The ultraviolet absorption spectra of cyclobutanone, cyclopentanone and tetrahydrofuran-3-one were recorded and analyzed in the 28,000-44,000 cm-1 region. More than 40 absorption bands were assigned for cyclobutanone. These arise from combinations of three ring (<7,<8 and <9), the C=O in-plane waggings(<20), the C=O out-of-plane waggings(<26) and the ring puckering(<27) vibrations. Assigned bands were compared with previously recorded jet-cooled fluorescence excitation spectra (FES). Additional C=O out-of-plane wagging bands were found for cyclopentanone and tetrahydrofuran-3-one and the potential energy function for this vibration in cyclopentanone and tetrahydrofuran-3-one were recalculated.

  17. Risk of myelodysplastic syndromes in people exposed to ionizing radiation: a retrospective cohort study of Nagasaki atomic bomb survivors.

    PubMed

    Iwanaga, Masako; Hsu, Wan-Ling; Soda, Midori; Takasaki, Yumi; Tawara, Masayuki; Joh, Tatsuro; Amenomori, Tatsuhiko; Yamamura, Masaomi; Yoshida, Yoshiharu; Koba, Takashi; Miyazaki, Yasushi; Matsuo, Tatsuki; Preston, Dale L; Suyama, Akihiko; Kodama, Kazunori; Tomonaga, Masao

    2011-02-01

    The risk of myelodysplastic syndromes (MDS) has not been fully investigated among people exposed to ionizing radiation. We investigate MDS risk and radiation dose-response in Japanese atomic bomb survivors. We conducted a retrospective cohort study by using two databases of Nagasaki atomic bomb survivors: 64,026 people with known exposure distance in the database of Nagasaki University Atomic-Bomb Disease Institute (ABDI) and 22,245 people with estimated radiation dose in the Radiation Effects Research Foundation Life Span Study (LSS). Patients with MDS diagnosed from 1985 to 2004 were identified by record linkage between the cohorts and the Nagasaki Prefecture Cancer Registry. Cox and Poisson regression models were used to estimate relationships between exposure distance or dose and MDS risk. There were 151 patients with MDS in the ABDI cohort and 47 patients with MDS in the LSS cohort. MDS rate increased inversely with exposure distance, with an excess relative risk (ERR) decay per km of 1.2 (95% CI, 0.4 to 3.0; P < .001) for ABDI. MDS risk also showed a significant linear response to exposure dose level (P < .001) with an ERR per Gy of 4.3 (95% CI, 1.6 to 9.5; P < .001). After adjustment for sex, attained age, and birth year, the MDS risk was significantly greater in those exposed when young. A significant linear radiation dose-response for MDS exists in atomic bomb survivors 40 to 60 years after radiation exposure. Clinicians should perform careful long-term follow-up of irradiated people to detect MDS as early as possible.

  18. Monte Carlo study of the depth-dependent fluence perturbation in parallel-plate ionization chambers in electron beams.

    PubMed

    Zink, K; Czarnecki, D; Looe, H K; von Voigts-Rhetz, P; Harder, D

    2014-11-01

    The electron fluence inside a parallel-plate ionization chamber positioned in a water phantom and exposed to a clinical electron beam deviates from the unperturbed fluence in water in absence of the chamber. One reason for the fluence perturbation is the well-known "inscattering effect," whose physical cause is the lack of electron scattering in the gas-filled cavity. Correction factors determined to correct for this effect have long been recommended. However, more recent Monte Carlo calculations have led to some doubt about the range of validity of these corrections. Therefore, the aim of the present study is to reanalyze the development of the fluence perturbation with depth and to review the function of the guard rings. Spatially resolved Monte Carlo simulations of the dose profiles within gas-filled cavities with various radii in clinical electron beams have been performed in order to determine the radial variation of the fluence perturbation in a coin-shaped cavity, to study the influences of the radius of the collecting electrode and of the width of the guard ring upon the indicated value of the ionization chamber formed by the cavity, and to investigate the development of the perturbation as a function of the depth in an electron-irradiated phantom. The simulations were performed for a primary electron energy of 6 MeV. The Monte Carlo simulations clearly demonstrated a surprisingly large in- and outward electron transport across the lateral cavity boundary. This results in a strong influence of the depth-dependent development of the electron field in the surrounding medium upon the chamber reading. In the buildup region of the depth-dose curve, the in-out balance of the electron fluence is positive and shows the well-known dose oscillation near the cavity/water boundary. At the depth of the dose maximum the in-out balance is equilibrated, and in the falling part of the depth-dose curve it is negative, as shown here the first time. The influences of both the

  19. Monte Carlo study of the depth-dependent fluence perturbation in parallel-plate ionization chambers in electron beams

    SciTech Connect

    Zink, K.; Czarnecki, D.; Voigts-Rhetz, P. von; Looe, H. K.; Harder, D.

    2014-11-01

    Purpose: The electron fluence inside a parallel-plate ionization chamber positioned in a water phantom and exposed to a clinical electron beam deviates from the unperturbed fluence in water in absence of the chamber. One reason for the fluence perturbation is the well-known “inscattering effect,” whose physical cause is the lack of electron scattering in the gas-filled cavity. Correction factors determined to correct for this effect have long been recommended. However, more recent Monte Carlo calculations have led to some doubt about the range of validity of these corrections. Therefore, the aim of the present study is to reanalyze the development of the fluence perturbation with depth and to review the function of the guard rings. Methods: Spatially resolved Monte Carlo simulations of the dose profiles within gas-filled cavities with various radii in clinical electron beams have been performed in order to determine the radial variation of the fluence perturbation in a coin-shaped cavity, to study the influences of the radius of the collecting electrode and of the width of the guard ring upon the indicated value of the ionization chamber formed by the cavity, and to investigate the development of the perturbation as a function of the depth in an electron-irradiated phantom. The simulations were performed for a primary electron energy of 6 MeV. Results: The Monte Carlo simulations clearly demonstrated a surprisingly large in- and outward electron transport across the lateral cavity boundary. This results in a strong influence of the depth-dependent development of the electron field in the surrounding medium upon the chamber reading. In the buildup region of the depth-dose curve, the in–out balance of the electron fluence is positive and shows the well-known dose oscillation near the cavity/water boundary. At the depth of the dose maximum the in–out balance is equilibrated, and in the falling part of the depth-dose curve it is negative, as shown here the

  20. Ionization probes of molecular structure and chemistry

    SciTech Connect

    Johnson, P.M.

    1993-12-01

    Various photoionization processes provide very sensitive probes for the detection and understanding of the spectra of molecules relevant to combustion processes. The detection of ionization can be selective by using resonant multiphoton ionization or by exploiting the fact that different molecules have different sets of ionization potentials. Therefore, the structure and dynamics of individual molecules can be studied even in a mixed sample. The authors are continuing to develop methods for the selective spectroscopic detection of molecules by ionization, and to use these methods for the study of some molecules of combustion interest.

  1. Ionization levels of As vacancies in as-grown GaAs studied by positron-lifetime spectroscopy

    SciTech Connect

    Saarinen, K.; Hautojaervi, P.; Lanki, P. ); Corbel, C. )

    1991-11-15

    The properties of the native monovacancy defects are systematically investigated by positron-lifetime measurements in {ital n}-type GaAs with carrier concentrations of {ital n}=10{sup 15--}10{sup 18} cm{sup {minus}3}. The native defects present two ionization levels at {ital E}{sub {ital C}}{minus}30 meV and {ital E}{sub {ital C}}{minus}140 meV. The first corresponds to a charge transition 1{minus}{r arrow}0 and the second to 0{r arrow}1+. The transitions are attributed to ionizations of As vacancy, which may be isolated or part of a complex. In a simple identification of the defect with {ital V}{sub As}, the ionization level at {ital E}{sub {ital C}}{minus}30 meV is attributed to the transition {ital V}{sub As}{sup {minus}}{r arrow}{ital V}{sub As}{sup 0} and the ionization level at {ital E}{sub {ital C}}{minus}140 meV to the transition {ital V}{sub As}{sup 0}{r arrow}{ital V}{sub As}{sup +}. The results show further that the configuration of {ital V}{sub As}{sup {minus}} is strongly relaxed inwards compared to the structure of {ital V}{sub As}{sup 0}.

  2. Multiphoton Ionization Mass and Photoelectron Spectroscopy.

    DTIC Science & Technology

    1984-07-01

    narro , band. tunable. frequency doubled dye laser Their relative importance depend% on the sample being studied ha- led to an cnormou, improcment in...block number) Mult iphoton Ionization Photoelectron Spectroscopy Laser Induced Ionization Ultraviolet Laser Radiation ft ArITAcr (camthIe i rvee ehl N...molecular ions generated by laser ionization have been monitored. Using a time of flight photoelectron spectrometer, the kinetic energy distribution of the

  3. Poly(2-methyl-2-oxazoline)-b-poly(tetrahydrofuran)-b-poly(2-methyl-2-oxazoline) amphiphilic triblock copolymers: synthesis, physicochemical characterizations, and hydrosolubilizing properties.

    PubMed

    Rasolonjatovo, Bazoly; Gomez, Jean-Pierre; Même, William; Gonçalves, Cristine; Huin, Cécile; Bennevault-Celton, Véronique; Le Gall, Tony; Montier, Tristan; Lehn, Pierre; Cheradame, Hervé; Midoux, Patrick; Guégan, Philippe

    2015-03-09

    Block copolymers assembled into micelles have gained a lot of attention to improve drug delivery. The recent drawbacks of the poly(ethylene oxide) blocks (PEO) contained in amphiphilic pluronics derivatives made of a central poly(propylene oxide) block surrounded by two PEO blocks were recently revealed, opening the way to the design of new amphiphilic block copolymers able to self-assemble in water and to entrap molecules of interest. Here, a family of p(methyloxazoline)-b-p(tetrahydrofuran)-b-p(methyloxazoline) triblock copolymers (called TBCP) is synthesized using cationic ring opening polymerization. Studies of micelle formation using dynamic light scattering, isothermal titration calorimetry (ITC), NMR diffusion-ordered spectroscopy (DOSY), and fluorescence experiments lead us to draw a relationship between copolymer structure and the physicochemical properties of the block copolymers (critical micellar concentration (CMC), Nagg, core diameter, shell thickness, etc.). The packing parameter of the block copolymers indicates the formation of a core-corona structure. Hydrosolubilizing properties of TBCPs were exemplified with curcumin selected as a highly insoluble drug model. Curcumin, a natural polyphenolic compound, has shown a large spectrum of biological and pharmacological activity, including anti-inflammatory, antimicrobial, antioxidant, and anticarcinogenic activities. An optimized formulation process reveals that the aggregation number is the parameter affecting drug encapsulation. Patch clamp experiments carried out to study the interaction of TBCP with the cell membrane demonstrate their permeation property suitable to promote the cellular internalization of curcumin.

  4. Structural studies of the allelic wheat glutenin subunits 1Bx7 and 1Bx20 by matrix-assisted laser desorption/ionization mass spectrometry and high-performance liquid chromatography/electrospray ionization mass spectrometry.

    PubMed

    Cunsolo, Vincenzo; Foti, Salvatore; Saletti, Rosaria; Gilbert, Simon; Tatham, Arthur S; Shewry, Peter R

    2004-01-01

    Structural studies of the high molecular mass (HMM) glutenin subunits 1Bx7 (from cvs Hereward and Galatea) and 1Bx20 (from cv. Bidi17) of bread wheat were conducted using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS) and reversed-phase high-performance liquid chromatography/electrospray ionization mass spectrometry (RP-HPLC/ESI-MS). For all three proteins, MALDI-TOFMS analysis showed that the isolated fractions contained a second component with a mass about 650 Da lower than the major component. The testing and correction of the gene-derived amino acid sequences of the three proteins were performed by direct MALDI-TOFMS analysis of their tryptic peptide mixture. Analysis of the digest was performed by recording several MALDI mass spectra of the mixture at low, medium and high mass ranges, optimizing the matrix and the acquisition parameters for each mass range. Complementary data were obtained by RP-HPLC/ESI-MS analysis of the tryptic digest. This resulted in coverage of about 98% of the sequences. In contrast to the gene-derived data, the results obtained demonstrate the insertion of the sequence QPGQGQ between Trp716 and Gln717 of subunit 1Bx7 (cv. Galatea) and a possible single amino acid substitution within the T20 peptide of subunit 1Bx20. Moreover, the mass spectrometric data demonstrated that the lower mass components present in all the fractions correspond to the major components but lack about six amino acid residues, which are probably lost from the protein C-terminus. Finally, the results obtained provide evidence for the lack of glycosylation or other post-translational modifications of these subunits. Copyright 2004 John Wiley & Sons, Ltd.

  5. Using PFI-ZEKE spectroscopy to study excited states of molecular ions: implications for state selection through pulsed field ionization

    NASA Astrophysics Data System (ADS)

    Martin, James D.; Alcaraz, Christian; Mank, A.; Kong, Wei; Hepburn, John W.

    1995-09-01

    The introduction of the pulsed field ionization zero kinetic energy photoelectron spectroscopy technique (referred to as PFI-ZEKE spectroscopy) has resulted in a revolution in photoelectron spectroscopy, because of the tremendous improvement in resolution. This method of threshold photoelectron spectroscopy is based on field ionization of metastable high principal quantum number Rydberg states using a pulsed electric field, delayed from the laser excitation. The detailed mechanism for stabilization of the high principal quantum number Rydberg states has been the subject of a great deal of recent discussion in the literature, and is still somewhat controversial. It is well known that Rydberg state lifetimes scale as n-3, for fluorescence, autoionization, or predissociation, under ideal conditions. This means that for a Rydberg series that can decay by autoionization, if the lifetime of a 5p Rydberg state is 10-12 s, the lifetime of a 150p state will be 10-7 s, which is an order of magnitude shorter than typical delay times used in PFI-ZEKE. The 150p state will be field ionized by an electric field of 0.7 to 1.5 V/cm, which is typical of the pulsed fields used for Stark ionization. This question about Rydberg state lifetimes becomes quite important if one wishes to carry out PFI-ZEKE spectroscopy of ion states well above the lowest ionization threshold, as many decay channels will be available to the Rydberg states converging to the high energy states, resulting in shorter lifetimes for these high energy Rydberg states. Our work in this area has focused largely on PFI-ZEKE spectroscopy at excited state thresholds in molecular ions, where problems of autoionization will be most severe. To reach these high energy thresholds, we have usually used single photon excitation with coherent vacuum ultraviolet light. This excitation method has many advantages.

  6. Study of a noncovalent trp repressor: DNA operator complex by electrospray ionization time-of-flight mass spectrometry.

    PubMed

    Potier, N; Donald, L J; Chernushevich, I; Ayed, A; Ens, W; Arrowsmith, C H; Standing, K G; Duckworth, H W

    1998-06-01

    Electrospray ionization time-of-flight mass spectrometry (ESI-TOF MS) has been used to study noncovalent interactions between the trp apo-repressor (TrpR), its co-repressor tryptophan and its specific operator DNA. In 5 mM ammonium acetate, TrpR was detected as a partially unfolded monomer. In the presence of a 21-base-pair DNA possessing the two symmetrically arranged CTAG consensus sequences required for specific TrpR binding, a homodimer-dsDNA complex with a 1:1 stoichiometry was observed. Co-repressor was not needed for the complex to form under our experimental conditions. Collision induced dissociation (CID-MS) revealed that this complex was very stable in the gas phase since dissociation was achieved only at energies that also broke covalent bonds. We saw no evidence for the presence of the six water molecules that mediate the interaction between the protein and the DNA in the crystal structure. To check the binding specificity of the TrpR for its target DNA, a competitive experiment was undertaken: the protein was mixed with an equimolar amount of three different DNAs in which the two CTAG sequences were separated by 2, 4, and 6 bp, respectively. Only the DNA with the correct consensus spacing of 4 bp was able to form stable interactions with TrpR. This experiment demonstrates the potential of ESI-MS to test the sequence-specificity of protein-DNA complexes. The interactions between the TrpR-DNA complex and 5-methyl-, L- and D-tryptophan were also investigated. Two molecules of 5-methyl- or L-tryptophan were bound with high affinity to the TrpR-DNA complex. On the other hand, D-tryptophan appeared to bind to the complex with poor specificity and poor affinity.

  7. Study of a noncovalent trp repressor: DNA operator complex by electrospray ionization time-of-flight mass spectrometry.

    PubMed Central

    Potier, N.; Donald, L. J.; Chernushevich, I.; Ayed, A.; Ens, W.; Arrowsmith, C. H.; Standing, K. G.; Duckworth, H. W.

    1998-01-01

    Electrospray ionization time-of-flight mass spectrometry (ESI-TOF MS) has been used to study noncovalent interactions between the trp apo-repressor (TrpR), its co-repressor tryptophan and its specific operator DNA. In 5 mM ammonium acetate, TrpR was detected as a partially unfolded monomer. In the presence of a 21-base-pair DNA possessing the two symmetrically arranged CTAG consensus sequences required for specific TrpR binding, a homodimer-dsDNA complex with a 1:1 stoichiometry was observed. Co-repressor was not needed for the complex to form under our experimental conditions. Collision induced dissociation (CID-MS) revealed that this complex was very stable in the gas phase since dissociation was achieved only at energies that also broke covalent bonds. We saw no evidence for the presence of the six water molecules that mediate the interaction between the protein and the DNA in the crystal structure. To check the binding specificity of the TrpR for its target DNA, a competitive experiment was undertaken: the protein was mixed with an equimolar amount of three different DNAs in which the two CTAG sequences were separated by 2, 4, and 6 bp, respectively. Only the DNA with the correct consensus spacing of 4 bp was able to form stable interactions with TrpR. This experiment demonstrates the potential of ESI-MS to test the sequence-specificity of protein-DNA complexes. The interactions between the TrpR-DNA complex and 5-methyl-, L- and D-tryptophan were also investigated. Two molecules of 5-methyl- or L-tryptophan were bound with high affinity to the TrpR-DNA complex. On the other hand, D-tryptophan appeared to bind to the complex with poor specificity and poor affinity. PMID:9655343

  8. Mechanistic and Kinetic Study of Singlet O2 Oxidation of Methionine by On-Line Electrospray Ionization Mass Spectrometry.

    PubMed

    Liu, Fangwei; Lu, Wenchao; Yin, Xunlong; Liu, Jianbo

    2016-01-01

    We report a reaction apparatus developed to monitor singlet oxygen ((1)O2) reactions in solution using on-line ESI mass spectrometry and spectroscopy measurements. (1)O2 was generated in the gas phase by the reaction of H2O2 with Cl2, detected by its emission at 1270 nm, and bubbled into aqueous solution continuously. (1)O2 concentrations in solution were linearly related to the emission intensities of airborne (1)O2, and their absolute scales were established based on a calibration using 9,10-anthracene dipropionate dianion as an (1)O2 trapping agent. Products from (1)O2 oxidation were monitored by UV-Vis absorption and positive/negative ESI mass spectra, and product structures were elucidated using collision-induced dissociation-tandem mass spectrometry. To suppress electrical discharge in negative ESI of aqueous solution, methanol was added to electrospray via in-spray solution mixing using theta-glass ESI emitters. Capitalizing on this apparatus, the reaction of (1)O2 with methionine was investigated. We have identified methionine oxidation intermediates and products at different pH, and measured reaction rate constants. (1)O2 oxidation of methionine is mediated by persulfoxide in both acidic and basic solutions. Persulfoxide continues to react with another methionine, yielding methionine sulfoxide as end-product albeit with a much lower reaction rate in basic solution. Density functional theory was used to explore reaction potential energy surfaces and establish kinetic models, with solvation effects simulated using the polarized continuum model. Combined with our previous study of gas-phase methionine ions with (1)O2, evolution of methionine oxidation pathways at different ionization states and in different media is described.

  9. Mechanistic and Kinetic Study of Singlet O2 Oxidation of Methionine by On-Line Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Liu, Fangwei; Lu, Wenchao; Yin, Xunlong; Liu, Jianbo

    2016-01-01

    We report a reaction apparatus developed to monitor singlet oxygen (1O2) reactions in solution using on-line ESI mass spectrometry and spectroscopy measurements. 1O2 was generated in the gas phase by the reaction of H2O2 with Cl2, detected by its emission at 1270 nm, and bubbled into aqueous solution continuously. 1O2 concentrations in solution were linearly related to the emission intensities of airborne 1O2, and their absolute scales were established based on a calibration using 9,10-anthracene dipropionate dianion as an 1O2 trapping agent. Products from 1O2 oxidation were monitored by UV-Vis absorption and positive/negative ESI mass spectra, and product structures were elucidated using collision-induced dissociation-tandem mass spectrometry. To suppress electrical discharge in negative ESI of aqueous solution, methanol was added to electrospray via in-spray solution mixing using theta-glass ESI emitters. Capitalizing on this apparatus, the reaction of 1O2 with methionine was investigated. We have identified methionine oxidation intermediates and products at different pH, and measured reaction rate constants. 1O2 oxidation of methionine is mediated by persulfoxide in both acidic and basic solutions. Persulfoxide continues to react with another methionine, yielding methionine sulfoxide as end-product albeit with a much lower reaction rate in basic solution. Density functional theory was used to explore reaction potential energy surfaces and establish kinetic models, with solvation effects simulated using the polarized continuum model. Combined with our previous study of gas-phase methionine ions with 1O2, evolution of methionine oxidation pathways at different ionization states and in different media is described.

  10. Coincidence studies of He ionized by C{sup 6+}, Au{sup 24+}, and Au{sup 53+}

    SciTech Connect

    McGovern, M.; Walters, H. R. J.; Assafrao, D.; Mohallem, J. R.; Whelan, Colm T.

    2010-04-15

    A recently developed [Phys. Rev. A 79, 042707 (2009)] impact parameter coupled pseudostate approximation (CP) is applied to calculate triple differential cross sections for single ionization of He by C{sup 6+}, Au{sup 24+}, and Au{sup 53+} projectiles at impact energies of 100 and 2 MeV/amu for C{sup 6+} and 3.6 MeV/amu for Au{sup 24+} and Au{sup 53+}. For C{sup 6+}, satisfactory, but not perfect, agreement is found with experimental measurements in coplanar geometry, but there is substantial disagreement with data taken in a perpendicular plane geometry. The CP calculations firmly contradict a projectile-nucleus interaction model which has been used to support the perpendicular plane measurements. For Au{sup 24+} and Au{sup 53+}, there is a complete lack of accord with the available experiments. However, for Au{sup 24+} the theoretical position appears to be quite firm with clear indications of convergence in the CP approximation and very good agreement between CP and the completely different three-distorted-waves eikonal-initial-state (3DW-EIS) approximation. The situation for Au{sup 53+} is different. At the momentum transfers at which the measurements were made, there are doubts about the convergence of the CP approximation and a factor of 2 difference between the CP and 3DW-EIS predictions. The discord between theory and experiment is even greater with the experiment giving cross sections a factor of 10 larger than the theory. A study of the convergence of the CP approximation shows that it improves rapidly with reducing momentum transfer. As a consequence, lower-order cross sections than the triple are quite well converged and present an opportunity for a more reliable test of the experiment.

  11. Studies of Total Electron Content variations at low-latitude stations within the Equatorial Ionization Anomaly zone

    NASA Astrophysics Data System (ADS)

    Lilian, Olatunbosun

    2016-07-01

    The total electron content (TEC) is an important parameter to monitor for possible space weather impacts. The radio waves that pass through the earth's ionosphere travel more slowly than their free space velocity due to group path delay of the ionosphere. This group path delay is directly proportional to the TEC of the ionosphere. Using dual frequency GPS receiver at low latitude stations of Ile-Ife (7.52oN, 4.28oE), Addis Ababa (9.04oN, 38.77oE) and Bangalore (13.03oE, 77.57oE), all located within 0 - 15oN of the equatorial anomaly region, the measurement of ionospheric TEC for 2012 has been carried out. The data from the three stations were used to study the diurnal, monthly and seasonal variations of TEC. The diurnal variations maximize between 10:00 - 16:00UT, 08:00 - 14:00UT and 06:00 - 12:00UT for Ile-Ife, Addis Ababa and Bangalore stations respectively. The diurnal variations showed wave-like pertubation during disturbed and quiet periods at Bangalore and Addis Ababa stations. The monthly average TEC variations showed that the month of March recorded the highest TEC value of ~59TECu at about 16:00UT in Ile-Ife station, while TEC at Addis Ababa and Bangalore maximize in October with ~72TECu and 65TECu at about 11:00UT and 09:00UT respectively. Seasonal variations showed that TEC maximizes during the equinoctial months and least in summer, over the three stations. Keywords: Total Electron Content, Equatorial Ionization Anomaly, Global Positioning System co-author:E.A. Ariyibi(Department of Physics and Engineering Physics, Obafemi Awolowo University, Ile-Ife, Nigeria)

  12. An experimental study of recombination and polarity effect in a set of customized plane parallel ionization chambers.

    PubMed

    Kron, T; McNiven, A; Witruk, B; Kenny, M; Battista, J

    2006-12-01

    Plane parallel ionization chambers are an important tool for dosimetry and absolute calibration of electron beams used for radiotherapy. Most dosimetric protocols require corrections for recombination and polarity effects, which are to be determined experimentally as they depend on chamber design and radiation quality. Both effects were investigated in electron beams from a linear accelerator (Varian 21CD) for a set of four tissue equivalent plane parallel ionization chambers customized for the present research by Standard Imaging (Madison WI). All four chambers share the same design and air cavity dimensions, differing only in the diameter of their collecting electrode and the corresponding width of the guard ring. The diameters of the collecting electrodes were 2 mm, 4 mm, 10 mm and 20 mm. Measurements were taken using electron beams of nominal energy 6 to 20 MeV in a 10 cm x 10 cm field size with a SSD of 100 cm at various depths in a Solid Water slab phantom. No significant variation of recombination effect was found with radiation quality, depth of measurement or chamber design. However, the polarity effect exceeded 5% for the chambers with small collecting electrode for an effective electron energy below 4 MeV at the point of measurement. The magnitude of the effect increased with decreasing electron energy in the phantom. The polarity correction factor calculated following AAPM protocol TG51 ranged from approximately 1.00 for the 20.0 mm chamber to less than 0.95 for the 2 mm chamber at 4.1 cm depth in a electron beam of nominally 12 MeV. By inverting the chamber it could be shown that the polarity effect did not depend on the polarity of the electrode first traversed by the electron beam. Similarly, the introduction of an air gap between the overlying phantom layer and the chambers demonstrated that the angular distribution of the electrons at the point of measurement had a lesser effect on the polarity correction than the electron energy itself. The

  13. Dynamics of tetrahydrofuran as minority component in a mixture with poly(2-(dimethylamino)ethyl methacrylate): A neutron scattering and dielectric spectroscopy investigation

    SciTech Connect

    Goracci, G. Arbe, A.; Lohstroh, W.; Su, Y.; Colmenero, J.

    2015-09-07

    We have investigated a mixture of poly(2-(dimethylamino)ethyl methacrylate) (PDMAEMA) and tetrahydrofuran (THF) (70 wt. % PDMAEMA/30 wt. % THF) by combining dielectric spectroscopy and quasielastic neutron scattering (QENS) on a labelled sample, focusing on the dynamics of the THF molecules. Two independent processes have been identified. The “fast” one has been qualified as due to an internal motion of the THF ring leading to hydrogen displacements of about 3 Å with rather broadly distributed activation energies. The “slow” process is characterized by an Arrhenius-like temperature dependence of the characteristic time which persists over more than 9 orders of magnitude in time. The QENS results evidence the confined nature of this process, determining a size of about 8 Å for the volume within which THF hydrogens’ motions are restricted. In a complementary way, we have also investigated the structural features of the sample. This study suggests that THF molecules are well dispersed among side-groups nano-domains in the polymer matrix, ruling out a significant presence of clusters of solvent. Such a good dispersion, together with a rich mobility of the local environment, would prevent cooperativity effects to develop for the structural relaxation of solvent molecules, frustrating thereby the emergence of Vogel-Fulcher-like behavior, at least in the whole temperature interval investigated.

  14. Continuous hydrogenation of ethyl levulinate to γ-valerolactone and 2-methyl tetrahydrofuran over alumina doped Cu/SiO2 catalyst: the potential of commercialization

    PubMed Central

    Zheng, Junlin; Zhu, Junhua; Xu, Xuan; Wang, Wanmin; Li, Jiwen; Zhao, Yan; Tang, Kangjian; Song, Qi; Qi, Xiaolan; Kong, Dejin; Tang, Yi

    2016-01-01

    Hydrogenation of levulinic acid (LA) and its esters to produce γ-valerolactone (GVL) and 2-methyl tetrahydrofuran (2-MTHF) is a key step for the utilization of cellulose derived LA. Aiming to develop a commercially feasible base metal catalyst for the production of GVL from LA, with satisfactory activity, selectivity, and stability, Al2O3 doped Cu/SiO2 and Cu/SiO2 catalysts were fabricated by co-precipitation routes in parallel. The diverse physio-chemical properties of these two catalysts were characterized by XRD, TEM, dissociative N2O chemisorptions, and Py-IR methods. The catalytic properties of these two catalysts were systematically assessed in the continuous hydrogenation of ethyl levulinate (EL) in a fixed-bed reactor. The effect of acidic property of the SiO2 substrate on the catalytic properties was investigated. To justify the potential of its commercialization, significant attention was paid on the initial activity, proper operation window, by-products control, selectivity, and stability of the catalyst. The effect of reaction conditions, such as temperature and pressure, on the performance of the catalyst was also thoroughly studied. The development of alumina doped Cu/SiO2 catalyst strengthened the value-chain from cellulose to industrially important chemicals via LA and GVL. PMID:27377401

  15. Continuous hydrogenation of ethyl levulinate to γ-valerolactone and 2-methyl tetrahydrofuran over alumina doped Cu/SiO2 catalyst: the potential of commercialization.

    PubMed

    Zheng, Junlin; Zhu, Junhua; Xu, Xuan; Wang, Wanmin; Li, Jiwen; Zhao, Yan; Tang, Kangjian; Song, Qi; Qi, Xiaolan; Kong, Dejin; Tang, Yi

    2016-07-05

    Hydrogenation of levulinic acid (LA) and its esters to produce γ-valerolactone (GVL) and 2-methyl tetrahydrofuran (2-MTHF) is a key step for the utilization of cellulose derived LA. Aiming to develop a commercially feasible base metal catalyst for the production of GVL from LA, with satisfactory activity, selectivity, and stability, Al2O3 doped Cu/SiO2 and Cu/SiO2 catalysts were fabricated by co-precipitation routes in parallel. The diverse physio-chemical properties of these two catalysts were characterized by XRD, TEM, dissociative N2O chemisorptions, and Py-IR methods. The catalytic properties of these two catalysts were systematically assessed in the continuous hydrogenation of ethyl levulinate (EL) in a fixed-bed reactor. The effect of acidic property of the SiO2 substrate on the catalytic properties was investigated. To justify the potential of its commercialization, significant attention was paid on the initial activity, proper operation window, by-products control, selectivity, and stability of the catalyst. The effect of reaction conditions, such as temperature and pressure, on the performance of the catalyst was also thoroughly studied. The development of alumina doped Cu/SiO2 catalyst strengthened the value-chain from cellulose to industrially important chemicals via LA and GVL.

  16. Pressure-dependent competition among reaction pathways from first- and second-O2 additions in the low-temperature oxidation of tetrahydrofuran

    DOE PAGES

    Antonov, Ivan O.; Zador, Judit; Rotavera, Brandon; ...

    2016-07-21

    Here, we report a combined experimental and quantum chemistry study of the initial reactions in low-temperature oxidation of tetrahydrofuran (THF). Using synchrotron-based time-resolved VUV photoionization mass spectrometry, we probe numerous transient intermediates and products at P = 10–2000 Torr and T = 400–700 K. A key reaction sequence, revealed by our experiments, is the conversion of THF-yl peroxy to hydroperoxy-THF-yl radicals (QOOH), followed by a second O2 addition and subsequent decomposition to dihydrofuranyl hydroperoxide + HO2 or to γ-butyrolactone hydroperoxide + OH. The competition between these two pathways affects the degree of radical chain-branching and is likely of central importancemore » in modeling the autoignition of THF. We interpret our data with the aid of quantum chemical calculations of the THF-yl + O2 and QOOH + O2 potential energy surfaces. On the basis of our results, we propose a simplified THF oxidation mechanism below 700 K, which involves the competition among unimolecular decomposition and oxidation pathways of QOOH.« less

  17. Continuous hydrogenation of ethyl levulinate to γ-valerolactone and 2-methyl tetrahydrofuran over alumina doped Cu/SiO2 catalyst: the potential of commercialization

    NASA Astrophysics Data System (ADS)

    Zheng, Junlin; Zhu, Junhua; Xu, Xuan; Wang, Wanmin; Li, Jiwen; Zhao, Yan; Tang, Kangjian; Song, Qi; Qi, Xiaolan; Kong, Dejin; Tang, Yi

    2016-07-01

    Hydrogenation of levulinic acid (LA) and its esters to produce γ-valerolactone (GVL) and 2-methyl tetrahydrofuran (2-MTHF) is a key step for the utilization of cellulose derived LA. Aiming to develop a commercially feasible base metal catalyst for the production of GVL from LA, with satisfactory activity, selectivity, and stability, Al2O3 doped Cu/SiO2 and Cu/SiO2 catalysts were fabricated by co-precipitation routes in parallel. The diverse physio-chemical properties of these two catalysts were characterized by XRD, TEM, dissociative N2O chemisorptions, and Py-IR methods. The catalytic properties of these two catalysts were systematically assessed in the continuous hydrogenation of ethyl levulinate (EL) in a fixed-bed reactor. The effect of acidic property of the SiO2 substrate on the catalytic properties was investigated. To justify the potential of its commercialization, significant attention was paid on the initial activity, proper operation window, by-products control, selectivity, and stability of the catalyst. The effect of reaction conditions, such as temperature and pressure, on the performance of the catalyst was also thoroughly studied. The development of alumina doped Cu/SiO2 catalyst strengthened the value-chain from cellulose to industrially important chemicals via LA and GVL.

  18. Pressure-dependent competition among reaction pathways from first- and second-O2 additions in the low-temperature oxidation of tetrahydrofuran

    SciTech Connect

    Antonov, Ivan O.; Zador, Judit; Rotavera, Brandon; Papajak, Ewa; Osborn, David L.; Taatjes, Craig A.; Sheps, Leonid

    2016-07-21

    Here, we report a combined experimental and quantum chemistry study of the initial reactions in low-temperature oxidation of tetrahydrofuran (THF). Using synchrotron-based time-resolved VUV photoionization mass spectrometry, we probe numerous transient intermediates and products at P = 10–2000 Torr and T = 400–700 K. A key reaction sequence, revealed by our experiments, is the conversion of THF-yl peroxy to hydroperoxy-THF-yl radicals (QOOH), followed by a second O2 addition and subsequent decomposition to dihydrofuranyl hydroperoxide + HO2 or to γ-butyrolactone hydroperoxide + OH. The competition between these two pathways affects the degree of radical chain-branching and is likely of central importance in modeling the autoignition of THF. We interpret our data with the aid of quantum chemical calculations of the THF-yl + O2 and QOOH + O2 potential energy surfaces. On the basis of our results, we propose a simplified THF oxidation mechanism below 700 K, which involves the competition among unimolecular decomposition and oxidation pathways of QOOH.

  19. Pressure-dependent competition among reaction pathways from first- and second-O2 additions in the low-temperature oxidation of tetrahydrofuran

    SciTech Connect

    Antonov, Ivan O.; Zador, Judit; Rotavera, Brandon; Papajak, Ewa; Osborn, David L.; Taatjes, Craig A.; Sheps, Leonid

    2016-07-21

    Here, we report a combined experimental and quantum chemistry study of the initial reactions in low-temperature oxidation of tetrahydrofuran (THF). Using synchrotron-based time-resolved VUV photoionization mass spectrometry, we probe numerous transient intermediates and products at P = 10–2000 Torr and T = 400–700 K. A key reaction sequence, revealed by our experiments, is the conversion of THF-yl peroxy to hydroperoxy-THF-yl radicals (QOOH), followed by a second O2 addition and subsequent decomposition to dihydrofuranyl hydroperoxide + HO2 or to γ-butyrolactone hydroperoxide + OH. The competition between these two pathways affects the degree of radical chain-branching and is likely of central importance in modeling the autoignition of THF. We interpret our data with the aid of quantum chemical calculations of the THF-yl + O2 and QOOH + O2 potential energy surfaces. On the basis of our results, we propose a simplified THF oxidation mechanism below 700 K, which involves the competition among unimolecular decomposition and oxidation pathways of QOOH.

  20. Pressure-Dependent Competition among Reaction Pathways from First- and Second-O2 Additions in the Low-Temperature Oxidation of Tetrahydrofuran.

    PubMed

    Antonov, Ivan O; Zádor, Judit; Rotavera, Brandon; Papajak, Ewa; Osborn, David L; Taatjes, Craig A; Sheps, Leonid

    2016-08-25

    We report a combined experimental and quantum chemistry study of the initial reactions in low-temperature oxidation of tetrahydrofuran (THF). Using synchrotron-based time-resolved VUV photoionization mass spectrometry, we probe numerous transient intermediates and products at P = 10-2000 Torr and T = 400-700 K. A key reaction sequence, revealed by our experiments, is the conversion of THF-yl peroxy to hydroperoxy-THF-yl radicals (QOOH), followed by a second O2 addition and subsequent decomposition to dihydrofuranyl hydroperoxide + HO2 or to γ-butyrolactone hydroperoxide + OH. The competition between these two pathways affects the degree of radical chain-branching and is likely of central importance in modeling the autoignition of THF. We interpret our data with the aid of quantum chemical calculations of the THF-yl + O2 and QOOH + O2 potential energy surfaces. On the basis of our results, we propose a simplified THF oxidation mechanism below 700 K, which involves the competition among unimolecular decomposition and oxidation pathways of QOOH.

  1. Dynamics of tetrahydrofuran as minority component in a mixture with poly(2-(dimethylamino)ethyl methacrylate): A neutron scattering and dielectric spectroscopy investigation

    NASA Astrophysics Data System (ADS)

    Goracci, G.; Arbe, A.; Alegría, A.; Lohstroh, W.; Su, Y.; Colmenero, J.

    2015-09-01

    We have investigated a mixture of poly(2-(dimethylamino)ethyl methacrylate) (PDMAEMA) and tetrahydrofuran (THF) (70 wt. % PDMAEMA/30 wt. % THF) by combining dielectric spectroscopy and quasielastic neutron scattering (QENS) on a labelled sample, focusing on the dynamics of the THF molecules. Two independent processes have been identified. The "fast" one has been qualified as due to an internal motion of the THF ring leading to hydrogen displacements of about 3 Å with rather broadly distributed activation energies. The "slow" process is characterized by an Arrhenius-like temperature dependence of the characteristic time which persists over more than 9 orders of magnitude in time. The QENS results evidence the confined nature of this process, determining a size of about 8 Å for the volume within which THF hydrogens' motions are restricted. In a complementary way, we have also investigated the structural features of the sample. This study suggests that THF molecules are well dispersed among side-groups nano-domains in the polymer matrix, ruling out a significant presence of clusters of solvent. Such a good dispersion, together with a rich mobility of the local environment, would prevent cooperativity effects to develop for the structural relaxation of solvent molecules, frustrating thereby the emergence of Vogel-Fulcher-like behavior, at least in the whole temperature interval investigated.

  2. Initial results of positron ionization mass spectrometry

    NASA Technical Reports Server (NTRS)

    Donohue, D. L.; Hulett, L. D., Jr.; Mcluckey, S. A.; Glish, G. L.; Eckenrode, B. A.

    1990-01-01

    The use of monoenergetic positrons for the ionization of organic molecules in the gas phase is described. The ionic products are analyzed with a time-of-flight mass spectrometer and detected to produce a mass spectrum. The ionization mechanisms which can be studied in this way include positron impact at energies above the ionization limit of the target molecules, positronium formation in the Ore gap energy range, and positron attachment at energies less than 1eV. The technique of positron ionization mass spectrometry (PIMS) may have analytical utility in that chemical selectivity is observed for one or more of these processes.

  3. The study of state-selected ion-molecule reactions using the vacuum ultraviolet pulsed field ionization-photoion technique.

    PubMed

    Dressler, Rainer A; Chiu, Y; Levandier, D J; Tang, X N; Hou, Y; Chang, C; Houchins, C; Xu, H; Ng, Cheuk-Yiu

    2006-10-07

    This paper presents the methodology to generate beams of ions in single quantum states for bimolecular ion-molecule reaction dynamics studies using pulsed field ionization (PFI) of atoms or molecules in high-n Rydberg states produced by vacuum ultraviolet (VUV) synchrotron or laser photoexcitation. Employing the pseudocontinuum high-resolution VUV synchrotron radiation at the Advanced Light Source as the photoionization source, PFI photoions (PFI-PIs) in selected rovibrational states have been generated for ion-molecule reaction studies using a fast-ion gate to pass the PFI-PIs at a fixed delay with respect to the detection of the PFI photoelectrons (PFI-PEs). The fast ion gate provided by a novel interleaved comb wire gate lens is the key for achieving the optimal signal-to-noise ratio in state-selected ion-molecule collision studies using the VUV synchrotron based PFI-PE secondary ion coincidence (PFI-PESICO) method. The most recent development of the VUV laser PFI-PI scheme for state-selected ion-molecule collision studies is also described. Absolute integral cross sections for state-selected H2+ ions ranging from v+ = 0 to 17 in collisions with Ar, Ne, and He at controlled translational energies have been obtained by employing the VUV synchrotron based PFI-PESICO scheme. The comparison between PFI-PESICO cross sections for the H2+(HD+)+Ne and H2+(HD+)+He proton-transfer reactions and theoretical cross sections based on quasiclassical trajectory (QCT) calculations and three-dimensional quantum scattering calculations performed on the most recently available ab initio potential energy surfaces is highlighted. In both reaction systems, quantum scattering resonances enhance the integral cross sections significantly above QCT predictions at low translational and vibrational energies. At higher energies, the agreement between experiment and quasiclassical theory is very good. The profile and magnitude of the kinetic energy dependence of the absolute integral cross

  4. Collision-energy-resolved Penning ionization electron spectroscopy of p-benzoquinone: Study of electronic structure and anisotropic interaction with He*(2 3S) metastable atoms

    NASA Astrophysics Data System (ADS)

    Kishimoto, Naoki; Okamura, Kohji; Ohno, Koichi

    2004-06-01

    Collision energy dependence of partial ionization cross sections (CEDPICS) of p-benzoquinone with He*(2 3S) metastable atoms indicates that interaction potentials between p-benzoquinone and He*(2 3S) are highly anisotropic in the studied collision energy range (100-250 meV). Attractive interactions were found around the C=O groups for in-plane and out-of-plane directions, while repulsive interactions were found around CH bonds and the benzenoid ring. Assignment of the first four ionic states of p-benzoquinone and an analogous methyl-substituted compound was examined with CEDPICS and anisotropic distributions of the corresponding two nonbonding oxygen orbitals (nO+,nO-) and two πCC orbitals (πCC+,πCC-). An extra band that shows negative CEDPICS was observed at ca. 7.2 eV in Penning ionization electron spectrum.

  5. Single ionization of molecular iodine

    NASA Astrophysics Data System (ADS)

    Smith, Dale L.; Tagliamonti, Vincent; Dragan, James; Gibson, George N.

    2017-01-01

    We performed a study of the single ionization of iodine, I2 over a range of wavelengths. Single ionization of I2 is unexpectedly found to have a contribution from inner molecular orbitals involving the 5 s electrons. The I+I+ dissociation channel was recorded through velocity map imaging, and the kinetic-energy release of each channel was determined with two-dimensional fitting of the images. Most of the measured kinetic-energy data were inconsistent with ionization to the X , A , and B states of I2 + , implying ionization from deeper orbitals. A pump-probe Fourier transform technique was used to look for modulation at the X - and A -state vibrational frequencies to see if they were intermediate states in a two-step process. X - and A -state modulation was seen only for kinetic-energy releases below 0.2 eV, consistent with dissociation through the B state. From these results and intensity-, polarization-, and wavelength-dependent experiments we found no evidence of bond softening, electron rescattering, or photon mediation through the X or A states to higher-energy single-ionization channels.

  6. Comparative study of electrospray and photospray ionization sources coupled to quadrupole time-of-flight mass spectrometer for olive oil authentication.

    PubMed

    Gómez-Ariza, J L; Arias-Borrego, A; García-Barrera, T; Beltran, R

    2006-11-15

    The use of fast and reliable analytical procedures for olive oil authentication is a priority demand due to its wide consumption and healthy benefits. Olive oil adulteration with other cheaper vegetable oils is a common practice that has to be detected and controlled. Rapid screening methods based on high resolution tandem mass spectrometry constitute today the option of choice due to sample handling simplicity and the elimination of the chromatographic step. The selection of the ionization source is critical and the comparison of their reliability necessary. The possibilities of the direct infusion electrospray ionization (ESI) and the recently introduced atmospheric pressure photospray ionization source (APPI), coupled to quadrupole time-of-flight (QqTOF), have been critically studied and compared to control olive oil adulteration. These techniques are very rapid (approximately 1min per sample) and have high discrimination power to elucidate key components in the edible oils studied (olive, hazelnut, sunflower and corn). Nevertheless, both sources are complementary, being APPI more sensitive for monoacyl- and diacylglycerol fragment ions and ESI for triacylglycerols. In addition, methods reproducibility's are very high, especially for APPI source. Mixtures of olive oil with the others vegetable oils can be easily discriminated which has been tested by using principal components analysis (PCA) with both ESI-MS and APPI-MS spectra. Analogously, linear discriminant analysis (LDA) confirms methods reproducibility and detection of other oils used as adulterants, in particular hazelnut oil, which is especially difficult given its chemical similarity with olive oil.

  7. On the use of different dielectric constants for computing individual and pairwise terms in poisson-boltzmann studies of protein ionization equilibrium.

    PubMed

    Teixeira, Vitor H; Cunha, Carlos A; Machuqueiro, Miguel; Oliveira, A Sofia F; Victor, Bruno L; Soares, Cláudio M; Baptista, António M

    2005-08-04

    Poisson-Boltzmann (PB) models are a fast and common tool for studying electrostatic processes in proteins, particularly their ionization equilibrium (protonation and/or reduction), often yielding quite good results when compared with more detailed models. Yet, they are conceptually very simple and necessarily approximate, their empirical character being most evident when it comes to the choice of the dielectric constant assigned to the protein region. The present study analyzes several factors affecting the ability of PB-based methods to model protein ionization equilibrium. We give particular attention to a suggestion made by Warshel and co-workers (e.g., Sham et al. J. Phys. Chem. B 1997, 101, 4458) of using different protein dielectric constants for computing the individual (site) and the pairwise (site-site) terms of the ionization free energies. Our prediction of pK(a) values for several proteins indicates that no advantage is obtained by such a procedure, even for sites that are buried and/or display large pK(a) shifts relative to the solution values. In particular, the present methodology gives the best predictions using a dielectric constant around 20, for shifted/buried and nonshifted/exposed sites alike. The similarities and differences between the PB model and Warshel's PDLD/S model are discussed, as well as the reasons behind their apparently discrepant results. The present PB model is shown to predict also good reduction potentials in redox proteins.

  8. Photoexcitation and ionization in carbon dioxide - Theoretical studies in the separated-channel static-exchange approximation

    NASA Technical Reports Server (NTRS)

    Padial, N.; Csanak, G.; Mckoy, B. V.; Langhoff, P. W.

    1981-01-01

    Vertical-electronic static-exchange photoexcitation and ionization cross sections are reported which provide a first approximation to the complete dipole spectrum of CO2. Separated-channel static-exchange calculations of vertical-electronic transition energies and oscillator strengths, and Stieltjes-Chebyshev moment methods were used in the development. Detailed comparisons were made of the static-exchange excitation and ionization spectra with photoabsorption, electron-impact excitation, and quantum-defect estimates of discrete transition energies and intensities, and with partial-channel photoionization cross sections obtained from fluorescence measurements and from tunable-source and (e, 2e) photoelectron spectroscopy. Results show that the separate-channel static-exchange approximation is generally satisfactory in CO2.

  9. [Saccharomyces cerevisiae as a model organism for studying the carcinogenicity of non-ionizing electromagnetic fields and radiation].

    PubMed

    Voĭchuk, S I

    2014-01-01

    Medical and biological aspects of the effects of non-ionizing electromagnetic (EM) fields and radiation on human health are the important issues that have arisen as a result of anthropogenic impact on the biosphere. Safe use of man-made sources of non-ionizing electromagnetic fields and radiation in a broad range of frequencies--static, radio-frequency and microwave--is a subject of discussions and speculations. The main problem is the lack of understanding of the mechanism(s) of reception of EMFs by living organisms. In this review we have analyzed the existing literature data regarding the effects of the electromagnetic radiation on the model eukaryotic organism--yeast Saccharomyces cerevisiae. An attempt was made to estimate the probability of induction of carcinogenesis in humans under the influence of magnetic fields and electromagnetic radiation of extremely low frequency, radio frequency and microwave ranges.

  10. Study of the upper spin--orbit state of the chloroiodomethane cation by mass-analyzed threshold ionization

    NASA Astrophysics Data System (ADS)

    Lee, Mina; Kim, Myung Soo

    2006-11-01

    The vibrational spectrum of CH 2ClI + in the upper spin-orbit state was obtained by one-photon mass-analyzed threshold ionization (MATI) spectrometry. The accurate ionization energy of the upper spin-orbit state was determined to be 10.3045 ± 0.0006 eV. The energy gap between the upper and lower spin-orbit states was 0.5539 ± 0.0012 eV. The frequency of the Cl-C-I bending mode was found to be most affected by the spin-orbit interaction. This suggests that the avoided crossing between the lower and upper spin-orbit states occurs along a direction close to the Cl-C-I bending coordinate.

  11. Comparison of hypertonic and isotonic reference electrode junctions for measuring ionized calcium in whole blood: a clinical study.

    PubMed

    Masters, P W; Payne, R B

    1993-06-01

    We measured ionized calcium concentrations in whole blood from 91 patients who had no clinical or biochemical evidence of disturbed calcium homeostasis and who had a wide range of serum albumin concentrations. We used both a standard Ciba-Corning 634 analyzer, which has a membrane-restricted saturated KCl reference electrode bridge, and a modified instrument with a 150 mmol/L NaCl bridge. After adjusting the externally standardized values from each instrument for their least-squares regressions on pH, there was a significant correlation between ionized calcium and albumin only with the standard analyzer. In contrast, only values from the modified instrument correlated with serum chloride; this was not explained by ionic strength or organic anion interferences. We conclude that there is unlikely to be any major advantage in using a membrane-restricted isotonic NaCl reference electrode for in vitro clinical measurements, although it may be of value for in vivo monitoring. The importance of measuring serum albumin when using most commercial ionized calcium analyzers is emphasized.

  12. Slow-electron velocity-map imaging study of aniline via resonance-enhanced two-photon ionization method

    NASA Astrophysics Data System (ADS)

    Qu, Zehua; Qin, Zhengbo; Zheng, Xianfeng; Wang, Hui; Yao, Guanxin; Zhang, Xianyi; Cui, Zhifeng

    2017-02-01

    Slow electron velocity-map imaging (SEVI) of aniline has been investigated via two-color resonant-enhanced two-photo (1 + 1‧) ionization (2C-R2PI) method. A number of vibrational frequencies in the first excited state of neutral (S1) and 2B1 ground electronic state of cation (D0) have been accurately determined. In addition, photoelectron angular distributions (PADs) in the two-step transitions are presented and reveal a near threshold shape resonance in the ionization of aniline. The SEVI spectra taken via various S1 intermediate states provide the detailed vibrational structures of D0 state and directly deduce the accurate adiabatic ionization potential (IP) of 62,271 ± 6 cm- 1. Ab initio calculations excellently reproduce the experimental IP value (Theo. 62,242 cm- 1). For most vibrational modes, good agreement between theoretical and experimental frequencies in the S0 and D0 states of aniline is obtained to aid us to clearly assign vibrational modes. Especially, the vibrational frequencies calculated at the CASSCF level are much better consistent with experimental data than that obtained using the TDDFT and CIS methods.

  13. Rotamers of m-chloroanisole studied by two-color resonant two-photon mass-analyzed threshold ionization spectroscopy

    NASA Astrophysics Data System (ADS)

    Huang, Hsin Chang; Shiung, Kui Shiu; Jin, Bih Yaw; Tzeng, Wen Bih

    2013-11-01

    We apply the resonant two-photon ionization (R2PI) and mass-analyzed threshold ionization (MATI) techniques to record the vibronic and cation spectra of m-chloroanisole. The vibronic features appear in two series, built on 35,822 ± 2 and 35,868 ± 2 cm-1, corresponding to the origins of the S1 ← S0 electronic transition (E1's) of the two rotamers. Analysis of the MATI spectra gives the adiabatic ionization energies (IEs) of 67,645 ± 5 and 68,008 ± 5 cm-1 for these two isomeric species. Comparing these data with those of anisole, we find that the chlorine substitution at the meta position leads to a red shift in the E1 and a blue shift in the IE. The observed R2PI and MATI bands mainly result from the in-plane ring deformation and substituent-sensitive bending vibrations of these species in the electronically excited S1 and cationic ground D0 states.

  14. Slow-electron velocity-map imaging study of aniline via resonance-enhanced two-photon ionization method.

    PubMed

    Qu, Zehua; Qin, Zhengbo; Zheng, Xianfeng; Wang, Hui; Yao, Guanxin; Zhang, Xianyi; Cui, Zhifeng

    2017-02-15

    Slow electron velocity-map imaging (SEVI) of aniline has been investigated via two-color resonant-enhanced two-photo (1+1') ionization (2C-R2PI) method. A number of vibrational frequencies in the first excited state of neutral (S1) and (2)B1 ground electronic state of cation (D0) have been accurately determined. In addition, photoelectron angular distributions (PADs) in the two-step transitions are presented and reveal a near threshold shape resonance in the ionization of aniline. The SEVI spectra taken via various S1 intermediate states provide the detailed vibrational structures of D0 state and directly deduce the accurate adiabatic ionization potential (IP) of 62,271±6cm(-1). Ab initio calculations excellently reproduce the experimental IP value (Theo. 62,242cm(-1)). For most vibrational modes, good agreement between theoretical and experimental frequencies in the S0 and D0 states of aniline is obtained to aid us to clearly assign vibrational modes. Especially, the vibrational frequencies calculated at the CASSCF level are much better consistent with experimental data than that obtained using the TDDFT and CIS methods.

  15. Direct Probing of Criegee Intermediates from Gas-Phase Ozonolysis Using Chemical Ionization Mass Spectrometry.

    PubMed

    Berndt, Torsten; Herrmann, Hartmut; Kurtén, Theo

    2017-09-27

    Criegee intermediates (CIs), mainly formed from gas-phase ozonolysis of alkenes, are considered as atmospheric oxidants besides OH and NO3 radicals as well as ozone. Direct CI measurement techniques are inevitably needed for reliable assessment of CIs' role in atmospheric processes. We found that CIs from ozonolysis reactions can be directly probed by means of chemical ionization mass spectrometry with a detection limit of about 10(4)-10(5) molecules cm(-3). Results from quantum chemical calculations support the experimental findings. The simplest CI, CH2OO, is detectable as an adduct with protonated ethers, preferably with protonated tetrahydrofuran. Kinetic measurements yielded k(CH2OO + SO2) = (3.3 ± 0.9) × 10(-11) and k(CH2OO + acetic acid) = (1.25 ± 0.30) × 10(-10) cm(3) molecule(-1) s(-1) at 295 ± 2 K, in very good agreement with recent measurements using diiodomethane photolysis for CH2OO generation. CIs from the ozonolysis of cyclohexene, acting as surrogate for cyclic terpenes, are followed as protonated species (CI)H(+) using protonated amines as reagent ions. Kinetic investigations indicate a different reactivity of cyclohexene-derived CIs compared with that of simple CIs, such as CH2OO. It is supposed that the aldehyde group significantly influences the CI reactivity of the cyclohexene-derived CIs. The direct CI detection method presented here should allow study of the formation and reactivity of a wide range of different CIs formed from atmospheric ozonolysis reactions.

  16. Analytical instruments, ionization sources, and ionization methods

    DOEpatents

    Atkinson, David A.; Mottishaw, Paul

    2006-04-11

    Methods and apparatus for simultaneous vaporization and ionization of a sample in a spectrometer prior to introducing the sample into the drift tube of the analyzer are disclosed. The apparatus includes a vaporization/ionization source having an electrically conductive conduit configured to receive sample particulate which is conveyed to a discharge end of the conduit. Positioned proximate to the discharge end of the conduit is an electrically conductive reference device. The conduit and the reference device act as electrodes and have an electrical potential maintained between them sufficient to cause a corona effect, which will cause at least partial simultaneous ionization and vaporization of the sample particulate. The electrical potential can be maintained to establish a continuous corona, or can be held slightly below the breakdown potential such that arrival of particulate at the point of proximity of the electrodes disrupts the potential, causing arcing and the corona effect. The electrical potential can also be varied to cause periodic arcing between the electrodes such that particulate passing through the arc is simultaneously vaporized and ionized. The invention further includes a spectrometer containing the source. The invention is particularly useful for ion mobility spectrometers and atmospheric pressure ionization mass spectrometers.

  17. Effect of Chromatin Structure on the Extent and Distribution of DNA Double Strand Breaks Produced by Ionizing Radiation; Comparative Study of hESC and Differentiated Cells Lines.

    PubMed

    Venkatesh, Priyanka; Panyutin, Irina V; Remeeva, Evgenia; Neumann, Ronald D; Panyutin, Igor G

    2016-01-02

    Chromatin structure affects the extent of DNA damage and repair. Thus, it has been shown that heterochromatin is more protective against DNA double strand breaks (DSB) formation by ionizing radiation (IR); and that DNA DSB repair may proceed differently in hetero- and euchromatin regions. Human embryonic stem cells (hESC) have a more open chromatin structure than differentiated cells. Here, we study the effect of chromatin structure in hESC on initial DSB formation and subsequent DSB repair. DSB were scored by comet assay; and DSB repair was assessed by repair foci formation via 53BP1 antibody staining. We found that in hESC, heterochromatin is confined to distinct regions, while in differentiated cells it is distributed more evenly within the nuclei. The same dose of ionizing radiation produced considerably more DSB in hESC than in differentiated derivatives, normal human fibroblasts; and one cancer cell line. At the same time, the number of DNA repair foci were not statistically different among these cells. We showed that in hESC, DNA repair foci localized almost exclusively outside the heterochromatin regions. We also noticed that exposure to ionizing radiation resulted in an increase in heterochromatin marker H3K9me3 in cancer HT1080 cells, and to a lesser extent in IMR90 normal fibroblasts, but not in hESCs. These results demonstrate the importance of chromatin conformation for DNA protection and DNA damage repair; and indicate the difference of these processes in hESC.

  18. Absolute cross sections for electronic excitation of condensed tetrahydrofuran (THF) by 11-16 eV electrons.

    PubMed

    Lemelin, V; Bass, A D; Cloutier, P; Sanche, L

    2016-11-07

    Absolute cross section (CS) data on the interaction of low energy electrons with DNA and its molecular constituents are required as input parameters in Monte-Carlo type simulations, for several radiobiological applications. Previously [V. Lemelin et al., J. Chem. Phys. 144, 074701 (2016)], we measured absolute vibrational CSs for low-energy electron scattering from condensed tetrahydrofuran, a convenient surrogate for the deoxyribose. Here we report absolute electronic CSs for energy losses of between 6 and 11.5 eV, by electrons with energies between 11 and 16 eV. The variation of these CSs with incident electron energy shows no evidence of transient anion states, consistent with theoretical and other experimental results, indicating that initial electron capture leading to DNA strand breaks occurs primarily on DNA bases or the phosphate group.

  19. Absolute cross sections for electronic excitation of condensed tetrahydrofuran (THF) by 11-16 eV electrons

    NASA Astrophysics Data System (ADS)

    Lemelin, V.; Bass, A. D.; Cloutier, P.; Sanche, L.

    2016-11-01

    Absolute cross section (CS) data on the interaction of low energy electrons with DNA and its molecular constituents are required as input parameters in Monte-Carlo type simulations, for several radiobiological applications. Previously [V. Lemelin et al., J. Chem. Phys. 144, 074701 (2016)], we measured absolute vibrational CSs for low-energy electron scattering from condensed tetrahydrofuran, a convenient surrogate for the deoxyribose. Here we report absolute electronic CSs for energy losses of between 6 and 11.5 eV, by electrons with energies between 11 and 16 eV. The variation of these CSs with incident electron energy shows no evidence of transient anion states, consistent with theoretical and other experimental results, indicating that initial electron capture leading to DNA strand breaks occurs primarily on DNA bases or the phosphate group.

  20. Kinetic-energy release distributions of fragment anions from collisions of potassium atoms with D-Ribose and tetrahydrofuran*

    NASA Astrophysics Data System (ADS)

    Rebelo, André; Cunha, Tiago; Mendes, Mónica; da Silva, Filipe Ferreira; García, Gustavo; Limão-Vieira, Paulo

    2016-06-01

    Kinetic-energy release distributions have been obtained from the width and shapes of the time-of-flight (TOF) negative ion mass peaks formed in collisions of fast potassium atoms with D-Ribose (DR) and tetrahydrofuran (THF) molecules. Recent dissociative ion-pair formation experiments yielding anion formation have shown that the dominant fragment from D-Ribose is OH- [D. Almeida, F. Ferreira da Silva, G. García, P. Limão-Vieira, J. Chem. Phys. 139, 114304 (2013)] whereas in the case of THF is O- [D. Almeida, F. Ferreira da Silva, S. Eden, G. García, P. Limão-Vieira, J. Phys. Chem. A 118, 690 (2014)]. The results for DR and THF show an energy distribution profile reminiscent of statistical degradation via vibrational excitation and partly due to direct transformation of the excess energy in translational energy.

  1. Absolute cross sections for electronic excitation of condensed tetrahydrofuran (THF) by 11–16 eV electrons

    PubMed Central

    Lemelin, V.; Bass, A. D.; Cloutier, P.; Sanche, L.

    2016-01-01

    Absolute cross section (CS) data on the interaction of low energy electrons with DNA and its molecular constituents are required as input parameters in Monte-Carlo type simulations, for several radiobiological applications. Previously [V. Lemelin et al., J. Chem. Phys. 144, 074701 (2016)], we measured absolute vibrational CSs for low-energy electron scattering from condensed tetrahydrofuran, a convenient surrogate for the deoxyribose. Here we report absolute electronic CSs for energy losses of between 6 and 11.5 eV, by electrons with energies between 11 and 16 eV. The variation of these CSs with incident electron energy shows no evidence of transient anion states, consistent with theoretical and other experimental results, indicating that initial electron capture leading to DNA strand breaks occurs primarily on DNA bases or the phosphate group. PMID:27825202

  2. Water dissociation in a radio-frequency electromagnetic field with ex situ electrodes—decomposition of perfluorooctanoic acid and tetrahydrofuran

    NASA Astrophysics Data System (ADS)

    Schneider, Jens; Holzer, Frank; Kraus, Markus; Kopinke, Frank-Dieter; Roland, Ulf

    2016-10-01

    The application of radio waves with a frequency of 13.56 MHz on electrolyte solutions in a capillary reactor led to the formation of reactive hydrogen and oxygen species and finally to molecular oxygen and hydrogen. This process of water splitting can be principally used for the elimination of hazardous chemicals in water. Two compounds, namely perfluorooctanoic acid (PFOA) and tetrahydrofuran, were converted using this process. Their main decomposition products were highly volatile and therefore transferred to a gas phase, where they could be identified by GC-MS analyses. It is remarkable that the chemical reactions could benefit from both the oxidizing and reducing species formed in the plasma process, which takes place in gas bubbles saturated with water vapor. The breaking of C-C and C-F bonds was proven in the case of PFOA, probably initiated by electron impacts and radical reactions.

  3. Inner-orbital ionization of iodine

    NASA Astrophysics Data System (ADS)

    Gibson, George; Smith, Dale; Tagliamonti, Vincent; Dragan, James

    2016-05-01

    Many coincidence techniques exist to study multiple ionization of molecules by strong laser fields. However, the first ionization step is critical in many experiments, although it is more difficult to obtain information about this initial step. We studied the single electron ionization of I2, as it presents interesting opportunities in that it is heavy and does not expand significantly during the laser pulse. Moreover, there are several distinct low-lying valence orbitals from which the electron may be removed. Most importantly, the kinetic energy release of the I+ + I dissociation channel can be measured and should correspond to well-known valence levels and separated atom limits. As it turns out, we must invoke deep valence orbits, built from the 5s electrons, to explain our data. Ionization from deep orbitals may be possible, as they have a smaller critical internuclear separation for enhanced ionization. We would like to acknowledge support from the NSF under Grant No. PHY-1306845.

  4. The Study of Complex (Ti, Zr, Cs) Nanopowder Influencing the Effective Ionization Potential of Arc Discharge When Mma Welding

    NASA Astrophysics Data System (ADS)

    Sapozhkov, S. B.; Burakova, E. M.

    2016-08-01

    Strength is one of the most important characteristics of a weld joint. Mechanical properties of a weld metal can be improved in a variety of ways. One of the possibilities is to add a nanopowder to the weld metal. Authors of the paper suggest changing the production process of MMA welding electrodes via adding nanopowder Ti, Zr, Cs to electrode components through liquid glass. Theoretical research into the nanopowder influence on the effective ionization potential (Ueff) of welding arc discharge is also necessitated. These measures support arcing stability, improve strength of a weld joint, as the consequence, ensure quality enhancing of a weld joint and the structure on the whole.

  5. A coincidence study of electron and positron impact ionization of Ar (3p) at 1 keV

    NASA Astrophysics Data System (ADS)

    Campeanu, Radu I.; Walters, James H. R.; Whelan, Colm T.

    2015-10-01

    Distorted-wave calculations of the triple differential cross section (TDCS) are presented for electron and positron impact ionization of Ar(3p) in coplanar asymmetric geometry at an impact energy of 1 keV and are compared with a recent experiment. The experiment indicates that the positron TDCS is generally larger than the equivalent electron TDCS. It is shown that the magnitude of the TDCS is extremely sensitive to the energy of the ejected electron and that only when the cross section is averaged over energy do we get a reasonable agreement with experiment.

  6. A coincidence study of electron and positron impact ionization of Ar (3p) at 1 keV

    NASA Astrophysics Data System (ADS)

    Campeanu, Radu I.; Walters, James H. R.; Whelan, Colm T.

    2015-10-01

    Distorted-wave calculations of the triple differential cross section (TDCS) are presented for electron and positron impact ionization of Ar(3 p) in coplanar asymmetric geometry at an impact energy of 1 keV and are compared with a recent experiment. The experiment indicates that the positron TDCS is generally larger than the equivalent electron TDCS. It is shown that the magnitude of the TDCS is extremely sensitive to the energy of the ejected electron and that only when the cross section is averaged over energy do we get a reasonable agreement with experiment.

  7. Aging effects on macadamia nut oil studied by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry.

    PubMed

    Proschogo, Nicholas W; Albertson, Peter L; Bursle, Johanna; McConchie, Cameron A; Turner, Athol G; Willett, Gary D

    2012-02-29

    High-resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry is successfully used in the detailed molecular analysis of aged macadamia nut oils. The results are consistent with peroxide values, the current industry measure for rancidity, and provide detailed molecular information on the oxidative and hydrolytic degeneration of such oils. Mass analysis of macadamia oil samples stored for extended periods at 6 °C revealed that oils obtained by the cold press method are more susceptible to aging than those obtained using modified Soxhlet or accelerated solvent extraction methods.

  8. Multiphoton ionization of Uracil

    NASA Astrophysics Data System (ADS)

    Prieto, Eladio; Martinez, Denhi; Guerrero, Alfonso; Alvarez, Ignacio; Cisneros, Carmen

    2016-05-01

    Multiphoton ionization and dissociation of Uracil using a Reflectron time of flight spectrometer was performed along with radiation from the second harmonic of a Nd:YAG laser. Uracil is one of the four nitrogen bases that belong to RNA. The last years special interest has been concentrated on the study of the effects under UV radiation in nucleic acids1 and also in the role that this molecule could have played in the origin and development of life on our planet.2 The MPI mass spectra show that the presence and intensity of the resulting ions strongly depend on the density power. The identification of the ions in the mass spectra is presented. The results are compared with those obtained in other laboratories under different experimental conditions and some of them show partial agreement.3 The present work was supported by CONACYT-Mexico Grant 165410 and DGAPA UNAM Grant IN101215 and IN102613.

  9. Site-specific solid cancer mortality following exposure to ionizing radiation: a cohort study of workers (INWORKS).

    PubMed

    Richardson, David B; Cardis, Elisabeth; Daniels, Robert D; Gillies, Michael; Haylock, Richard; Leuraud, Klervi; Laurier, Dominique; Moissonnier, Monika; Schubauer-Berigan, Mary K; Thierry-Chef, Isabelle; Kesminiene, Ausrele

    2017-10-04

    There is considerable scientific interest in associations between protracted low-dose exposure to ionizing radiation and the occurrence of specific types of cancer. Associations between ionizing radiation and site-specific solid cancer mortality were examined among 308,297 nuclear workers employed in France, the United Kingdom, and the United States. Workers were monitored for external radiation exposure and follow-up encompassed 8.2 million person-years. Radiation-mortality associations were estimated using a maximum likelihood method and using a Markov chain Monte Carlo method, the latter used to fit a hierarchical regression model to stabilize estimates of association. The analysis included 17,957 deaths due to solid cancer, the most common being lung, prostate, and colon cancer. Using a maximum likelihood method to quantify associations between radiation dose and site-specific cancer, we obtained positive point estimates for oral, esophagus, stomach, colon, rectum, pancreas, peritoneum, larynx, lung, pleura, bone and connective tissue, skin, ovary, testis, and thyroid cancer; in addition, we obtained negative point estimates for cancer of the liver and gallbladder, prostate, bladder, kidney, and brain. Most of these estimated coefficients exhibited substantial imprecision. Employing a hierarchical model for stabilization had little impact on the estimated associations for the most commonly observed outcomes, but for less frequent cancer types the stabilized estimates tended to take less extreme values and have greater precision than estimates obtained without such stabilization. The results provide further evidence regarding associations between low-dose radiation exposure and cancer.

  10. Effects of Tailored Surface Chemistry on Desorption Electrospray Ionization Mass Spectrometry: a Surface-Analytical Study by XPS and AFM

    NASA Astrophysics Data System (ADS)

    Penna, Andrea; Careri, Maria; Spencer, Nicholas D.; Rossi, Antonella

    2015-08-01

    Since it was proposed for the first time, desorption electrospray ionization-mass spectrometry (DESI-MS) has been evaluated for applicability in numerous areas. Elucidations of the ionization mechanisms and the subsequent formation of isolated gas-phase ions have been proposed so far. In this context, the role of both surface and pneumatic effects on ion-formation yield has recently been investigated. Nevertheless, the effect of the surface chemistry has not yet been completely understood. Functionalized glass surfaces have been prepared, in order to tailor surface performance for ion formation. Three substrates were functionalized by depositing three different silanes [3-mercaptopropyltriethoxysilane (MTES), octyltriethoxysilane (OTES), and 1H,1H,2H,2H-perfluorooctyltriethoxy-silane (FOTES)] from toluene solution onto standard glass slides. Surface characterization was carried out by contact-angle measurements, tapping-mode atomic force microscopy, and X-ray photoelectron spectroscopy. Morphologically homogeneous and thickness-controlled films in the nm range were obtained, with surface free energies lying between 15 and 70 mJ/m2. These results are discussed, together with those of DESI-MS on low-molecular-weight compounds such as melamine, tetracycline, and lincomycin, also taking into account the effects of the sprayer potential and its correlation with surface wettability. The results demonstrate that ion-formation efficiency is affected by surface wettability, and this was demonstrated operating above and below the onset of the electrospray.

  11. Attenuation and cross-attenuation in taste aversion learning in the rat: Studies with ionizing radiation, lithium chloride and ethanol

    SciTech Connect

    Rabin, B.M.; Hunt, W.A.; Lee, J.

    1988-12-01

    The preexposure paradigm was utilized to evaluate the similarity of ionizing radiation, lithium chloride and ethanol as unconditioned stimuli for the acquisition of a conditioned taste aversion. Three unpaired preexposures to lithium chloride (3.0 mEq/kg, IP) blocked the acquisition of a taste aversion when a novel sucrose solution was paired with either the injection of the same dose of lithium chloride or exposure to ionizing radiation (100 rad). Similar pretreatment with radiation blocked the acquisition of a radiation-induced aversion, but had no effect on taste aversions produced by lithium chloride (3.0 or 1.5 mEq/kg). Preexposure to ethanol (4 g/kg, PO) disrupted the acquisition of an ethanol-induced taste aversion, but not radiation- or lithium chloride-induced aversions. In contrast, preexposure to either radiation or lithium chloride attenuated an ethanol-induced taste aversion in intact rats, but not in rats with lesions of the area postrema. The results are discussed in terms of relationships between these three unconditioned stimuli and in terms of implications of these results for understanding the nature of the proximal unconditioned stimulus in taste aversion learning.

  12. Biological Effects of Ionizing Radiation

    DOE R&D Accomplishments Database

    Ingram, M.; Mason, W. B.; Whipple, G. H.; Howland, J. W.

    1952-04-07

    This report presents a review of present knowledge and concepts of the biological effects of ionizing radiations. Among the topics discussed are the physical and chemical effects of ionizing radiation on biological systems, morphological and physiological changes observed in biological systems subjected to ionizing radiations, physiological changes in the intact animal, latent changes following exposure of biological systems to ionizing radiations, factors influencing the biological response to ionizing radiation, relative effects of various ionizing radiations, and biological dosimetry.

  13. Male gonadal dose of ionizing radiation delivered during X-ray examinations and monthly probability of pregnancy: a population-based retrospective study

    PubMed Central

    Sinno-Tellier, Sandra; Bouyer, Jean; Ducot, Béatrice; Geoffroy-Perez, Beatrice; Spira, Alfred; Slama, Remy

    2006-01-01

    Background Male gonadal exposure to ionizing radiation may disrupt spermatogenesis, but its influence on the fecundity of couples has been rarely studied. We aimed to characterize the influence of male gonadal dose of ionizing radiation delivered during radiodiagnostic on the monthly probability of pregnancy. Methods We recruited a random sample of women who retrospectively described 1110 periods of unprotected intercourse beginning between 1985 and 1999 and leading either to a live birth or to no pregnancy; their duration was censored after 13 months. The male partner answered a telephone questionnaire on radiodiagnostic examinations. We assigned a mean gonadal dose to each type of radiodiagnostic examination. We defined male dose for each period of unprotected intercourse as the sum of the gonadal doses of the X-ray examinations experienced between 18 years of age and the date of discontinuation of contraception. Time to pregnancy was analysed using a discrete Cox model with random effect allowing to estimate hazard ratios of pregnancy. Results After adjustment for female factors likely to influence fecundity, there was no evidence of an association between male dose and the probability of pregnancy (test of homogeneity, p = 0.55). When compared to couples with a male gonadal dose between 0.01 and 0.20 milligrays (n = 321 periods of unprotected intercourse), couples with a gonadal dose above 10 milligrays had a hazard ratio of pregnancy of 1.44 (95% confidence interval, 0.73–2.86, n = 31). Conclusion Our study provides no evidence of a long-term detrimental effect of male gonadal dose of ionizing radiation delivered during radiodiagnostic on the monthly probability of pregnancy during the year following discontinuation of contraceptive use. Classification errors due to the retrospective assessment of male gonadal exposure may have limited the statistical power of our study. PMID:16515681

  14. IN-SITU PROBING OF RADIATION-INDUCED PROCESSING OF ORGANICS IN ASTROPHYSICAL ICE ANALOGS-NOVEL LASER DESORPTION LASER IONIZATION TIME-OF-FLIGHT MASS SPECTROSCOPIC STUDIES

    SciTech Connect

    Gudipati, Murthy S.; Yang Rui E-mail: ryang73@ustc.edu

    2012-09-01

    Understanding the evolution of organic molecules in ice grains in the interstellar medium (ISM) under cosmic rays, stellar radiation, and local electrons and ions is critical to our understanding of the connection between ISM and solar systems. Our study is aimed at reaching this goal of looking directly into radiation-induced processing in these ice grains. We developed a two-color laser-desorption laser-ionization time-of-flight mass spectroscopic method (2C-MALDI-TOF), similar to matrix-assisted laser desorption and ionization time-of-flight (MALDI-TOF) mass spectroscopy. Results presented here with polycyclic aromatic hydrocarbon (PAH) probe molecules embedded in water-ice at 5 K show for the first time that hydrogenation and oxygenation are the primary chemical reactions that occur in astrophysical ice analogs when subjected to Ly{alpha} radiation. We found that hydrogenation can occur over several unsaturated bonds and the product distribution corresponds to their stabilities. Multiple hydrogenation efficiency is found to be higher at higher temperatures (100 K) compared to 5 K-close to the interstellar ice temperatures. Hydroxylation is shown to have similar efficiencies at 5 K or 100 K, indicating that addition of O atoms or OH radicals to pre-ionized PAHs is a barrierless process. These studies-the first glimpses into interstellar ice chemistry through analog studies-show that once accreted onto ice grains PAHs lose their PAH spectroscopic signatures through radiation chemistry, which could be one of the reason for the lack of PAH detection in interstellar ice grains, particularly the outer regions of cold, dense clouds or the upper molecular layers of protoplanetary disks.

  15. Comparative study of fourteen alkaloids from Uncaria rhynchophylla hooks and leaves using HPLC-diode array detection-atmospheric pressure chemical ionization/MS method.

    PubMed

    Qu, Jialin; Gong, Tianxing; Ma, Bin; Zhang, Lin; Kano, Yoshihiro; Yuan, Dan

    2012-01-01

    The purpose of the study is to compare alkaloid profile of Uncaria rhynchophylla hooks and leaves. Ten oxindole alkaloids and four glycosidic indole alkaloids were identified using HPLC-diode array detection (DAD) or LC-atmospheric pressure chemical ionization (APCI)-MS method, and a HPLC-UV method for simultaneous quantification of major alkaloids was validated. The hooks are characterized by high levels of four oxindole alkaloids rhynchophylline (R), isorhynchophylline (IR), corynoxeine (C) and isocorynoxeine (IC), while the leaves contained high level of two glycosidic indole alkaloids vincoside lactam (VL) and strictosidine (S). The presented methods have proven its usefulness in chemical characterization of U. rhynchophylla hooks and leaves.

  16. A mechanophysical phase transition provides a dramatic example of colour polymorphism: the tribochromism of a substituted tri(methylene)tetrahydrofuran-2-one.

    PubMed

    Asiri, Abdullah M; Heller, Harry G; Hughes, David S; Hursthouse, Michael B; Kendrick, John; Leusen, Frank Jj; Montis, Riccardo

    2014-01-01

    Derivatives of fulgides have been shown to have interesting photochromic properties. We have synthesised a number of such derivatives and have found, in some cases, that crystals can be made to change colour on crushing, a phenomenon we have termed "tribochromism". We have studied a number of derivatives by X-ray crystallography, to see if the colour is linked to molecular structure or crystal packing, or both, and our structural results have been supported by calculation of molecular and lattice energies. A number of 5-dicyanomethylene-4-diphenylmethylene-3-disubstitutedmethylene-tetrahydrofuran-2-one compounds have been prepared and structurally characterised. The compounds are obtained as yellow or dark red crystals, or, in one case, both. In two cases where yellow crystals were obtained, we found that crushing the crystals gave a deep red powder. Structure determinations, including those of the one compound which gave both coloured forms, depending on crystallisation conditions, showed that the yellow crystals contained molecules in which the structure comprised a folded conformation at the diphenylmethylene site, whilst the red crystals contained molecules in a twisted conformation at this site. Lattice energy and molecular conformation energies were calculated for all molecules, and showed that the conformational energy of the molecule in structure IIIa (yellow) is marginally higher, and the conformation thus less stable, than that of the molecule in structure IIIb (red). However, the van der Waals energy for crystal structure IIIa, is slightly stronger than that of structure IIIb - which may be viewed as a hint of a metastable packing preference for IIIa, overcome by the contribution of a more stabilising Coulomb energy to the overall more favourable lattice energy of structure IIIb. Our studies have shown that the crystal colour is correlated with one of two molecular conformations which are different in energy, but that the less stable conformation can be

  17. How do liquid mixtures solubilize insoluble gelators? Self-assembly properties of pyrenyl-linker-glucono gelators in tetrahydrofuran-water mixtures.

    PubMed

    Yan, Ni; Xu, Zhiyan; Diehn, Kevin K; Raghavan, Srinivasa R; Fang, Yu; Weiss, Richard G

    2013-06-19

    The self-assembly behavior of a series of glucono-appended 1-pyrenesulfonyl derivatives containing α,ω-diaminoalkane spacers (Pn, where n, the number of methylene units separating the amino groups, is 2, 3, 4, 6, 7, and 8) in v:v tetrahydrofuran (THF):water mixtures is examined at room temperature. The Pn at 2 w/v % concentrations do not dissolve in either THF or water at room temperature. However, the Pn can be dissolved in some THF:water mixtures, and they form gels spontaneously in other compositions without dissolving completely. The self-assembly of the Pn in the liquid mixtures has been investigated using a variety of techniques. The particle sizes of the Pn in their solutions/sols, critical gelation concentrations, microstructures, thermal and mechanical stabilities of the gels, and molecular packing modes of Pn molecules in their gel networks are found to be very dependent on the composition of the liquid mixtures. Correlations between the self-assembly behavior of the Pn and the polarity of the liquid mixtures, as probed by E(T)(30) and Hansen solubility parameters, yield both qualitative and quantitative insights into why self-assembly of the Pn can or cannot be achieved in different liquid compositions. As revealed by UV-vis and fluorescence spectroscopy studies, π-π stacking of the pyrenyl groups occurs as part of the aggregation process. Correlations between the rheological properties of the gels and the Hansen solubility parameters of the Pn and the solvent mixtures indicate that hydrogen-bonding interactions are a major contributor to the mechanical stability. Overall, the results of this study offer a new strategy to investigate the balance between dissolution and aggregation of molecular gelators. To the best of our knowledge, this is the first example of the spontaneous formation of molecular gels without heating by placing gelators in mixtures of liquids in which they are insoluble in the neat components.

  18. Electron impact ionization cross section studies of C2Fx (x = 1 - 6) and C3Fx (x = 1 - 8) fluorocarbon species

    NASA Astrophysics Data System (ADS)

    Gupta, Dhanoj; Choi, Heechol; Song, Mi-Young; Karwasz, Grzegorz P.; Yoon, Jung-Sik

    2017-05-01

    The total ionization cross section for C2Fx (x = 1 - 6) and C3Fx (x = 1 - 8) fluorocarbon species are studied with the Binary-Encounter Bethe (BEB) model using various orbital parameters calculated from restricted/unrestricted Hartree-Fock (RHF/UHF) and Density Functional Theory (DFT). All the targets were optimized for their minimal structures and energies with several ab-initio methods with the aug-cc-pVTZ basis set. Among them, the present results with RHF/UHF orbital energies showed good agreement with the experimental results for stable targets C2F6, C2F4, C3F6 and C3F8. The results with the DFT (ωB97X/ωB97X-D) showed a reasonable agreement with the recent calculation of Bull et al. [J.N. Bull, M. Bart, C. Vallance, P.W. Harland, Phys. Rev. A 88, 062710 (2013)] for C2F6, C3F6 and C3F8 targets. The ionization cross section for C2F, C2F2, C2F3, C3F, C3F2, C3F3, C3F4, C3F5 and C3F7 were computed for the first time in the present study. We have also computed the vertical ionization potentials and polarizability for all the targets and compared them with other experimental and theoretical values. A good agreement is found between the present and the previous results. The calculated polarizability in turn is used to study the correlation with maximum ionization cross section and in general a good correlation is found among them, confirming the consistency and reliability of the present data. The cross section data reported in this article are very important for plasma modeling especially related to fluorocarbon plasmas. Contribution to the Topical Issue "Atomic and Molecular Data and their Applications", edited by Gordon W.F. Drake, Jung-Sik Yoon, Daiji Kato, Grzegorz Karwasz.

  19. Online atmospheric pressure chemical ionization ion trap mass spectrometry (APCI-IT-MSn) for measuring organic acids in concentrated bulk aerosol - a laboratory and field study

    NASA Astrophysics Data System (ADS)

    Vogel, A. L.; Äijälä, M.; Brüggemann, M.; Ehn, M.; Junninen, H.; Petäjä, T.; Worsnop, D. R.; Kulmala, M.; Williams, J.; Hoffmann, T.

    2013-02-01

    The field application of an aerosol concentrator in conjunction with an atmospheric pressure chemical ionization ion trap mass spectrometer (APCI-IT-MS) at the boreal forest station SMEAR II at Hyytiälä, Finland, is demonstrated in this study. APCI is a soft-ionization technique allowing online measurements of organic acids in the gas and particle phase. The detection limit for the acid species in the particle phase was improved by a factor of 7.5 to 11 (e.g. ∼40 ng m3 for pinonic acid) by using the miniature versatile aerosol concentration enrichment system (mVACES) upstream of the mass spectrometer. The APCI-IT-MS was calibrated in the negative ion mode with two biogenic organic acid standards - pinic acid and pinonic acid. Pinic acid was used as a surrogate for the quantification of the total amount of organic acids in the ambient aerosol based on the total signal intensities in the negative ion mode. The results were compared with the total organic signal of a C-ToF-AMS during the HUMPPA-COPEC 2010 field campaign. The campaign average contribution of organic acids measured by APCI-IT-MS to the total submicron organic aerosol mass was estimated to be about 60%, based on the response of pinic acid. Very good correlation between APCI-IT-MS and C-ToF-AMS (Pearson's R = 0.94) demonstrates soft-ionization mass spectrometry as a complimentary technique to AMS with electron impact ionization. MS2 studies of specific m/z ratios recorded during the HUMPPA-COPEC 2010 field campaign were compared to MS2 studies of selected monoterpene oxidation products formed in simulation chamber experiments. The comparison of the resulting fragments shows that oxidation products of the main VOCs emitted at Hyytiälä (α-pinene and Δ3-carene) cannot account for all of the measured fragments. Possible explanations for those unaccounted fragments are the presence of unidentified or underestimated biogenic SOA precursors, or that different products are formed by a different oxidant

  20. Online atmospheric pressure chemical ionization ion trap mass spectrometry (APCI-IT-MSn) for measuring organic acids in concentrated bulk aerosol - a laboratory and field study

    NASA Astrophysics Data System (ADS)

    Vogel, A. L.; Äijälä, M.; Brüggemann, M.; Ehn, M.; Junninen, H.; Petäjä, T.; Worsnop, D. R.; Kulmala, M.; Williams, J.; Hoffmann, T.

    2012-08-01

    The field application of an aerosol concentrator in conjunction with an atmospheric pressure chemical ionization ion trap mass spectrometer (APCI-IT-MS) at the boreal forest station SMEAR II at Hyytiälä, Finland, is demonstrated in this study. APCI is a soft ionization technique allowing online measurements of organic acids in the gas and particle phase. The detection limit for the acid species in the particle phase was increased by a factor of 7.5 to 11 (e.g. ~40 ng m-3 for pinonic acid) by using the miniature Versatile Aerosol Concentration Enrichment System (mVACES) upstream of the mass spectrometer. The APCI-IT-MS was calibrated in the negative ion mode with two biogenic organic acid standards - pinic acid and pinonic acid. Pinic acid was used as a surrogate for the quantification of the total amount of organic acids in the ambient aerosol based on the total signal intensities in the negative ion mode. The results were compared with the total organic signal of a C-ToF-AMS during the HUMPPA-COPEC 2010 field campaign. The campaign average contribution of organic acids measured by APCI-IT-MS to the total sub-micron organic aerosol mass was estimated to be about 60%. Very good correlation between APCI-IT-MS and C-ToF-AMS (Pearson's R = 0.94) demonstrates soft ionization mass spectrometry as a complimentary technique to AMS with electron impact ionization. MS2 studies of specific m/z ratios recorded during the HUMPPA-COPEC 2010 field campaign were compared to MS2 studies of selected monoterpene oxidation products formed in simulation chamber experiments. The comparison of the resulting fragments shows that oxidation products of the main VOCs emitted at Hyytiälä (α-pinene and Δ3-carene) cannot account for all of the measured fragments, which illustrates the complexity of ambient aerosol and possibly indicates unidentified or underestimated biogenic SOA precursor in the boreal forest.

  1. Picosecond ionization dynamics in femtosecond filaments at high pressures

    NASA Astrophysics Data System (ADS)

    Gao, Xiaohui; Patwardhan, Gauri; Schrauth, Samuel; Zhu, Daiwei; Popmintchev, Tenio; Kapteyn, Henry C.; Murnane, Margaret M.; Romanov, Dmitri A.; Levis, Robert J.; Gaeta, Alexander L.

    2017-01-01

    We investigate the plasma dynamics inside a femtosecond-pulse-induced filament generated in an argon gas for a wide range of pressures up to 60 bar. At higher pressures, we observe ionization immediately following a pulse, with up to a threefold increase in the electron density within 30 ps after the filamentary propagation of a femtosecond pulse. Our study suggests that this picosecond evolution can be attributed to collisional ionization including Penning and associative ionizations and electron-impact ionization of excited atoms generated during the pulse. The dominance of excited atoms over ionized atoms at the end of the pulse also indicates an intrapulse inhibition of avalanche ionization. This delayed ionization dynamics provides evidence for diagnosing atomic and molecular excitation and ionization in intense laser interaction with high-pressure gases.

  2. A novel technique for studying F-region ionization patches with the Resolute Bay Incoherent Scatter Radar - North

    NASA Astrophysics Data System (ADS)

    Perry, G. W.; Hosokawa, K.; St-Maurice, J.; Shiokawa, K.

    2013-12-01

    The northward facing Resolute Bay Incoherent Scatter Radar - North (RISR-N) and the soon to be operational southward facing RISR-Canada (RISR-C) systems are both exceptional platforms for investigating F-region ionization patches and the polar ionosphere. To advance patch research using these systems, an algorithm has been developed for detecting F-region ionization patches with the RISR-N system. The algorithm is based on the definition of a patch put forward by Crowley [1996]: a volume of F-region plasma with a density that is twice that of the background ionosphere. In this work, the algorithm is applied to the sizeable RISR-N dataset, providing valuable insight into the prevalence of patches over Resolute Bay over a time frame of several years. Additional questions concerning patches are also addressed using the algorithm, including: when compared to each other, do the occurrence rates of patches identified by the Optical Mesosphere and Thermosphere Imagers (OMTI), Polar Dual Auroral Radar Network (PolarDARN) and RISR-N instruments (whose fields-of-view overlap over Resolute Bay) agree? Namely, for every patch that is detected with RISR-N and/or PolarDARN, is there a corresponding patch seen optically? Lastly, using the algorithm, is it possible to advance our ability to distinguish patches from other coherent backscatter echoes detected by PolarDARN? Crowley, G. (1996), Critical review of ionospheric patches and blobs, in Review of Radio Science: 1993-1996, edited by W. R. Stone, pp. 619 648, Oxford Univ. Press, Oxford, U. K.

  3. Moving solvated electrons with light: Nonadiabatic mixed quantum/classical molecular dynamics simulations of the relocalization of photoexcited solvated electrons in tetrahydrofuran (THF)

    SciTech Connect

    Bedard-Hearn, Michael J.; Larsen, Ross E.; Schwartz, Benjamin J.

    2006-11-21

    Motivated by recent ultrafast spectroscopic experiments [Martini et al., Science 293, 462 (2001)], which suggest that photoexcited solvated electrons in tetrahydrofuran (THF) can relocalize (that is, return to equilibrium in solvent cavities far from where they started), we performed a series of nonequilibrium, nonadiabatic, mixed quantum/classical molecular dynamics simulations that mimic one-photon excitation of the THF-solvated electron. We find that as photoexcited THF-solvated electrons relax to their ground states either by continuous mixing from the excited state or via nonadiabatic transitions, {approx}30% of them relocalize into cavities that can be over 1 nm away from where they originated, in close agreement with the experiments. A detailed investigation shows that the ability of excited THF-solvated electrons to undergo photoinduced relocalization stems from the existence of preexisting cavity traps that are an intrinsic part of the structure of liquid THF. This explains why solvated electrons can undergo photoinduced relocalization in solvents like THF but not in solvents like water, which lack the preexisting traps necessary to stabilize the excited electron in other places in the fluid. We also find that even when they do not ultimately relocalize, photoexcited solvated electrons in THF temporarily visit other sites in the fluid, explaining why the photoexcitation of THF-solvated electrons is so efficient at promoting recombination with nearby scavengers. Overall, our study shows that the defining characteristic of a liquid that permits the photoassisted relocalization of solvated electrons is the existence of nascent cavities that are attractive to an excess electron; we propose that other such liquids can be found from classical computer simulations or neutron diffraction experiments.

  4. Extraction Behaviors of Heavy Rare Earths with Organophosphoric Extractants: The Contribution of Extractant Dimer Dissociation, Acid Ionization, and Complexation. A Quantum Chemistry Study.

    PubMed

    Jing, Yu; Chen, Ji; Chen, Li; Su, Wenrou; Liu, Yu; Li, Deqian

    2017-03-30

    Heavy rare earths (HREs), namely Ho(3+), Er(3+), Tm(3+), Yb(3+) and Lu(3+), are rarer and more exceptional than light rare earths, due to the stronger extraction capacity for 100 000 extractions. Therefore, their incomplete stripping and high acidity of stripping become problems for HRE separation by organophosphoric extractants. However, the theories of extractant structure-performance relationship and molecular design method of novel HRE extractants are still not perfect. Beyond the coordination chemistry of the HRE-extracted complex, the extractant dimer dissociation, acid ionization, and complexation behaviors can be crucial to HRE extraction and reactivity of ionic species for understanding and further improving the extraction performance. To address the above issues, three primary fundamental processes, including extractant dimer dissociation, acid ionization, and HRE complexation, were identified and investigated systematically. The intrinsic extraction performances of HRE cations with four acidic organophosphoric extractants (P507, P204, P227 and Cyanex 272) were studied by using relativistic energy-consistent 4f core pseudopotentials, combined with density functional theory and a solvation model. Four acidic organophosphoric extractants have been qualified quantitatively from microscopic structures to chemical properties. It has been found that the Gibbs free energy changes of the overall extraction process (sequence: P204 > P227 > P507 > Cyanex 272) and their differences as a function of HREs (sequence: Ho/Er > Er/Tm > Tm/Yb > Yb/Lu) are in good agreement with the experimental maximum extraction capacities and separation factors. These results could provide an important approach to evaluate HRE extractants by the comprehensive consideration of dimer dissociation, acid ionization, and complexation processes. This paper also demonstrates the importance of the P-O bond, the P-C bond, isomer substituent, and solvation effects on the structure

  5. A velocity-map imaging study of methyl non-resonant multiphoton ionization from the photodissociation of CH3I in the A-band.

    PubMed

    Poullain, Sonia Marggi; Chicharro, David V; Rubio-Lago, Luis; García-Vela, Alberto; Bañares, Luis

    2017-04-28

    Chemical reaction dynamics and, particularly, photodissociation in the gas phase are generally studied using pump-probe schemes where a first laser pulse induces the process under study and a second one detects the produced fragments. Providing an efficient detection of ro-vibrationally state-selected photofragments, the resonance enhanced multiphoton ionization (REMPI) technique is, without question, the most popular approach used for the probe step, while non-resonant multiphoton ionization (NRMPI) detection of the products is scarce. The main goal of this work is to test the sensitivity of the NRMPI technique to fragment vibrational distributions arising from molecular photodissociation processes. We revisit the well-known process of methyl iodide photodissociation in the A-band at around 280 nm, using the velocity-map imaging technique in conjunction with NRMPI of the methyl fragment. The detection wavelength, carefully selected to avoid any REMPI transition, was scanned between 325 and 335 nm seeking correlations between the different observables-the product vibrational, translational and angular distributions-and the excitation wavelength of the probe laser pulse. The experimental results have been discussed on the base of quantum dynamics calculations of photofragment vibrational populations carried out on available ab initio potential-energy surfaces using a four-dimensional model.This article is part of the themed issue 'Theoretical and computational studies of non-equilibrium and non-statistical dynamics in the gas phase, in the condensed phase and at interfaces'. © 2017 The Author(s).

  6. Probing Angular Correlations in Sequential Double Ionization

    SciTech Connect

    Fleischer, A.; Woerner, H. J.; Arissian, L.; Liu, L. R.; Meckel, M.; Rippert, A.; Doerner, R.; Villeneuve, D. M.; Corkum, P. B.; Staudte, A.

    2011-09-09

    We study electron correlation in sequential double ionization of noble gas atoms and HCl in intense, femtosecond laser pulses. We measure the photoelectron angular distributions of Ne{sup +} relative to the first electron in a pump-probe experiment with 8 fs, 800 nm, circularly polarized laser pulses at a peak intensity of a few 10{sup 15} W/cm{sup 2}. Using a linear-linear pump-probe setup, we further study He, Ar, and HCl. We find a clear angular correlation between the two ionization steps in the sequential double ionization intensity regime.

  7. Promotion of variant human mammary epithelial cell outgrowth by ionizing radiation: an agent-based model supported by in vitro studies

    PubMed Central

    2010-01-01

    -based modeling indicated that radiation-induced premature senescence of normal HMEC most likely accelerated vHMEC outgrowth through alleviation of spatial constraints. Subsequent experiments using defined co-cultures of vHMEC and senescent cells supported this mechanism. Conclusions Our studies indicate that ionizing radiation can promote the outgrowth of epigenetically altered cells with pre-malignant potential. PMID:20146798

  8. Alkali metal ionization detector

    DOEpatents

    Bauerle, James E.; Reed, William H.; Berkey, Edgar

    1978-01-01

    Variations in the conventional filament and collector electrodes of an alkali metal ionization detector, including the substitution of helical electrode configurations for either the conventional wire filament or flat plate collector; or, the substitution of a plurality of discrete filament electrodes providing an in situ capability for transferring from an operationally defective filament electrode to a previously unused filament electrode without removing the alkali metal ionization detector from the monitored environment. In particular, the helical collector arrangement which is coaxially disposed about the filament electrode, i.e. the thermal ionizer, provides an improved collection of positive ions developed by the filament electrode. The helical filament design, on the other hand, provides the advantage of an increased surface area for ionization of alkali metal-bearing species in a monitored gas environment as well as providing a relatively strong electric field for collecting the ions at the collector electrode about which the helical filament electrode is coaxially positioned. Alternatively, both the filament and collector electrodes can be helical. Furthermore, the operation of the conventional alkali metal ionization detector as a leak detector can be simplified as to cost and complexity, by operating the detector at a reduced collector potential while maintaining the sensitivity of the alkali metal ionization detector adequate for the relatively low concentration of alkali vapor and aerosol typically encountered in leak detection applications.

  9. Electron-Impact Ionization and Dissociative Ionization of Biomolecules

    NASA Technical Reports Server (NTRS)

    Huo, Winifred M.; Chaban, Galina M.; Dateo, Christopher E.

    2006-01-01

    It is well recognized that secondary electrons play an important role in radiation damage to humans. Particularly important is the damage of DNA by electrons, potentially leading to mutagenesis. Molecular-level study of electron interaction with DNA provides information on the damage pathways and dominant mechanisms. Our study of electron-impact ionization of DNA fragments uses the improved binary-encounter dipole model and covers DNA bases, sugar phosphate backbone, and nucleotides. An additivity principle is observed. For example, the sum of the ionization cross sections of the separate deoxyribose and phosphate fragments is in close agreement with the C3(sup prime)- and C5 (sup prime)-deoxyribose-phospate cross sections, differing by less than 5%. Investigation of tandem double lesion initiated by electron-impact dissociative ionization of guanine, followed by proton reaction with the cytosine in the Watson-Crick pair, is currently being studied to see if tandem double lesion can be initiated by electron impact. Up to now only OH-induced tandem double lesion has been studied.

  10. Electron-Impact Ionization and Dissociative Ionization of Biomolecules

    NASA Technical Reports Server (NTRS)

    Huo, Winifred M.; Chaban, Galina M.; Dateo, Christopher E.

    2006-01-01

    It is well recognized that secondary electrons play an important role in radiation damage to humans. Particularly important is the damage of DNA by electrons, potentially leading to mutagenesis. Molecular-level study of electron interaction with DNA provides information on the damage pathways and dominant mechanisms. Our study of electron-impact ionization of DNA fragments uses the improved binary-encounter dipole model and covers DNA bases, sugar phosphate backbone, and nucleotides. An additivity principle is observed. For example, the sum of the ionization cross sections of the separate deoxyribose and phosphate fragments is in close agreement with the C3(sup prime)- and C5 (sup prime)-deoxyribose-phospate cross sections, differing by less than 5%. Investigation of tandem double lesion initiated by electron-impact dissociative ionization of guanine, followed by proton reaction with the cytosine in the Watson-Crick pair, is currently being studied to see if tandem double lesion can be initiated by electron impact. Up to now only OH-induced tandem double lesion has been studied.

  11. Laser Desorption Ionization of As2Ch3 (Ch = S, Se, and Te) Chalcogenides Using Quadrupole Ion Trap Time-of-Flight Mass Spectrometry: A Comparative Study

    NASA Astrophysics Data System (ADS)

    Mawale, Ravi Madhukar; Ausekar, Mayuri Vilas; Prokeš, Lubomír; Nazabal, Virginie; Baudet, Emeline; Halenkovič, Tomáš; Bouška, Marek; Alberti, Milan; Němec, Petr; Havel, Josef

    2017-08-01

    Laser desorption ionization using time-of-flight mass spectrometer afforded with quadrupole ion trap was used to study As2Ch3 (Ch = S, Se, and Te) bulk chalcogenide materials. The main goal of the study is the identification of species present in the plasma originating from the interaction of laser pulses with solid state material. The generated clusters in both positive and negative ion mode are identified as 10 unary (S p +/- and As m +/- ) and 34 binary (As m S p +/- ) species for As2S3 glass, 2 unary (Se q +/- ) and 26 binary (As m Se q +/- ) species for As2Se3 glass, 7 unary (Te r +/- ) and 23 binary (As m Te r +/- ) species for As2Te3 material. The fragmentation of chalcogenide materials was diminished using some polymers and in this way 45 new, higher mass clusters have been detected. This novel approach opens a new possibility for laser desorption ionization mass spectrometry analysis of chalcogenides as well as other materials. [Figure not available: see fulltext.

  12. Fundamental studies of matrix-assisted laser desorption/ionization, using time-of-flight mass spectrometry to identify biological molecules

    SciTech Connect

    Eades, D.; Wruck, D.; Gregg, H.

    1996-11-11

    MALDI MS was developed as a way of getting molecular weight information on small quantities (picomole to femtomole levels) of high-mass, thermally labile macromolecules. While most other analytical MS ionization techniques cause fragmentation, decomposition, or multiple charging, MALDI efficiently places intact macromolecules into the gas phase with little fragmentation or rearrangement. This project had 3 objectives: establish the MALDI capability at LLNL, perform fundamental studies of analyte-matrix interactions, and apply the technique for biochemical research. A retired time-of-flight instrument was adapted for MALDI analyses, relevant parameters influencing the MALDI process were identified for further study (matrix molar absorptivity, sample crystal preparation), and collaborations were established with research groups in the Biology and Biotechnology Research Program at LLNL. In MALDI, the macromolecule of interest is mixed with a high-molar excess (1:100 to 1:10,000) of an organic matrix which readily absorbs energy at the wavelength corresponding to a UV laser. Upon laser irradiation, the matrix absorbs the majority of the energy, causing it to desorb from the surface and gently release the macromolecule into the gas phase with little or no fragmentation. Once in the gas phase, ion-molecule reactions between excited matrix and neutral macromolecules generated ionized analyte species which then can be focused into a MS for detection.

  13. A comparative study on carbon, boron-nitride, boron-phosphide and silicon-carbide nanotubes based on surface electrostatic potentials and average local ionization energies.

    PubMed

    Esrafili, Mehdi D; Behzadi, Hadi

    2013-06-01

    A density functional theory study was carried out to predict the electrostatic potentials as well as average local ionization energies on both the outer and the inner surfaces of carbon, boron-nitride (BN), boron-phosphide (BP) and silicon-carbide (SiC) single-walled nanotubes. For each nanotube, the effect of tube radius on the surface potentials and calculated average local ionization energies was investigated. It is found that SiC and BN nanotubes have much stronger and more variable surface potentials than do carbon and BP nanotubes. For the SiC, BN and BP nanotubes, there are characteristic patterns of positive and negative sites on the outer lateral surfaces. On the other hand, a general feature of all of the systems studied is that stronger potentials are associated with regions of higher curvature. According to the evaluated surface electrostatic potentials, it is concluded that, for the narrowest tubes, the water solubility of BN tubes is slightly greater than that of SiC followed by carbon and BP nanotubes.

  14. Multiphoton ionization of ions, neutrals, and clusters. Progress report

    SciTech Connect

    Wessel, J.

    1991-06-28

    Scientific results are summarized from a three year research program on multiphoton ionization in aromatic molecules, clusters, and their ions. As originally proposed, the studies elucidated a new cluster ionization mechanism, characterized properties of long range intermolecular interactions, and investigated electronic transitions of aromatic cations cooled in a supersonic beam. The studies indicate that the new cluster ionization mechanism is highly efficient and dominates conventional 1 + 1 resonant ionization. In the case of the dimer of the large aromatic molecule fluorene, the results suggest that excimer formation competes with a direct ionization process. Highly selective excitonic spectra have been identified for several cluster species.

  15. Ultraviolet Absorption Spectra, AB Initio Calculations, and Carbonyl Wagging Potential Energy Functions of Cyclobutanone, Cyclopentanone, BICYCLO[3.1.0]HEXAN-3-ONE, and TETRAHYDROFURAN-3-ONE

    NASA Astrophysics Data System (ADS)

    Lee, Soono; Dakkouri, Marwan; Choo, Jaebum; Laane, Jaan

    2000-03-01

    The electronic absorption spectra of cyclobutanone, cyclopentanone, bicyclo[3.1.0]hexan-3-one, and tetrahydrofuran-3-one were recorded and analyzed in the 28,000 - 44,000 cm-1 region. Several dozen absorption bands were assigned for each molecule. These arise from combinations of the ring vibrations and the C=O wagging vibrations. Assigned bands were compared with previously recorded jet-cooled fluorescence excitation spectra. Additional C=O out-of-plane wagging bands were found for cyclopentanone and tetrahydrofuran-3-one, and the potential energy functions for this vibration in these molecules were recalculated. These potential energy functions have barriers to inversion reflecting the fact that the carbonyl group is bent out of the ring plane in the S1(n, π*) excited electronic state.

  16. Epicyclic Twin-Helix Ionization Cooling Simulations

    SciTech Connect

    Vasiliy Morozov, Yaroslav Derbenev, A. Afanaciev, R.P. Johnson

    2011-04-01

    Parametric-resonance Ionization Cooling (PIC) is proposed as the final 6D cooling stage of a highluminosity muon collider. For the implementation of PIC, we earlier developed an epicyclic twin-helix channel with correlated behavior of the horizontal and vertical betatron motions and dispersion. We now insert absorber plates with short energy-recovering units located next to them at the appropriate locations in the twin-helix channel. We first demonstrate conventional ionization cooling in such a system with the optics uncorrelated. We then adjust the correlated optics state and induce a parametric resonance to study ionization cooling under the resonant condition.

  17. Application of liquid chromatography-direct-electron ionization-MS in an in vitro dermal absorption study: quantitative determination of trans-cinnamaldehyde.

    PubMed

    Cappiello, Achille; Famiglini, Giorgio; Termopoli, Veronica; Trufelli, Helga; Zazzeroni, Raniero; Jacquoilleot, Sandrine; Radici, Lucia; Saib, Ouarda

    2011-11-15

    We propose a new analytical approach, based on liquid chromatography (LC) coupled to electron ionization mass spectrometry (EI-MS), using a Direct-EI interface, for dermal absorption evaluation studies. Penetration through the skin of a given compound is evaluated by means of in vitro assays using diffusion cells. Currently, the most popular approach for the analysis of skin and fluid samples is LC coupled to electrospray ionization tandem mass spectrometry (ESI-MS/MS). However, this technique is largely affected by sample matrix interferences that heavily affect quantitative evaluation. LC-Direct-EI-MS is not affected by matrix interference and produces accurate quantitative data in a wide range of concentrations. Trans-cinnamaldehyde was chosen as test substance and applied in a suitable dosing vehicle on dermatomed human skin sections. This compound was then quantified in aliquots of receptor solution, skin extract, cell wash, skin wash, carbon filter extract, cotton swab extract, and tape strip digest. On column limits of detection (LOD) and limits of quantitation (LOQ) of 0.1 and 0.5 ng/μL, respectively, were achieved. Calibration showed satisfactory linearity and precision for the concentration range of interest. Matrix effects (ME) were evaluated for all sample types, demonstrating the absence of both signal enhancement and signal suppression. The Direct-EI absorption profile was compared with that obtained with liquid scintillation counting (LSC), a recognized ME free approach. A good correlation was found with all samples and for the overall recovery of the dosed substance.

  18. GAS-PHASE SYNTHESIS OF PRECURSORS OF INTERSTELLAR GLYCINE: A COMPUTATIONAL STUDY OF THE REACTIONS OF ACETIC ACID WITH HYDROXYLAMINE AND ITS IONIZED AND PROTONATED DERIVATIVES

    SciTech Connect

    Barrientos, Carmen; Redondo, Pilar; Largo, Laura; Rayon, Victor M.; Largo, Antonio

    2012-04-01

    A computational study of the reactions of hydroxylamine and its ionized and protonated derivatives with acetic acid is provided. The reaction of neutral hydroxylamine with acetic acid, despite being clearly exothermic, involves a very large energy barrier. The reaction of ionized hydroxylamine with acetic acid is also clearly exothermic, but again a significant energy barrier is found (around 24 kcal mol{sup -1} at the CCSD(T) level). The reaction of the most stable protonated isomer of hydroxylamine, NH{sub 3}OH{sup +}, with acetic acid also involves a high barrier (more than 27 kcal mol{sup -1} at the CCSD(T) level). Only the higher energy isomer, NH{sub 2}OH{sup +}{sub 2}, leads to a sensibly lower energy barrier (about 2.3 kcal mol{sup -1} at the CCSD(T) level). Nevertheless, an estimate of the reaction coefficient at low temperatures such as those reigning in the interstellar medium gives very low values. Therefore, it seems that precursors of interstellar glycine could not be efficiently produced from the reactions of hydroxylamine-derived ions with acetic acid.

  19. A study of the behavior of bi-oriented PVC exposed to ionizing radiation and its possible use in nuclear applications

    NASA Astrophysics Data System (ADS)

    Campi, F.; Casagrande, M.; Franzoni, G.; Minelli, C.; Porta, A.; Ramella, G.

    2014-06-01

    The paper discusses whether bi-oriented PVC, obtained by modifying the structures of polymers chains to enhance the mechanical properties of unplasticized PVC, could successfully replace metallic materials in industrial applications where radioactive fluids are processed and an intense field of ionizing radiation is present. Tests have been carried out in order to study the behavior of a commercial bi-oriented PVC when exposed to ionizing radiations. A numerical simulation allows comparing the effects of radiation expected on the pipe in nuclear industry applications with those resulting from the irradiation tests. Contamination and decontamination tests of bi-oriented PVC in contact with a radioactive solution have been performed too. Results show that the bi-oriented PVC can withstand high β and γ radiation doses (up to 100 kGy) without showing significant degradation in mechanical properties; bi-orientation of polymers chains in the bulk of material is not affected even to much higher doses (250 kGy); the decontamination of the material is satisfactory. The results suggest that tested commercial bi-oriented PVC could be considered in nuclear industry applications.

  20. Development and validation of a liquid chromatographic/electrospray ionization mass spectrometric method for the determination of salidroside in rat plasma: application to the pharmacokinetics study.

    PubMed

    Yu, Sen; Liu, Li; Wen, Tao; Liu, Yuchun; Wang, Dianlei; He, Yuxian; Liang, Yan; Liu, Xiaodong; Xie, Lin; Wang, Guangji; Wei, Wenzhi

    2008-01-01

    A sensitive and specific liquid chromatography-electrospray ionization-mass spectrometry (LC-ESI-MS) method has been developed and validated for the identification and quantification of salidroside, a major active constituent from Rhodiola rosea L., in rat plasma using helicid as an internal standard. The method involves a simple single-step liquid-liquid extraction with n-butanol. The analytes were separated by isocratic gradient elution on a Shim-pack ODS (4.6 microm, 250 mmx2.0 mm i.d.) column and analyzed in selected ion monitoring (SIM) mode with a negative electrospray ionization (ESI) interface using the respective [M+Cl]- ions, m/z 335 for salidroside, m/z 319 for internal standard. The method was validated over the concentration range of 5-2000 ng/mL for salidroside. Within- and between-batch precision (R.S.D.%) were all within 6% and accuracy ranged from 96 to 112%. The lower limits of quantification was 5 ng/mL. The extraction recovery was on average 86.6% for salidroside. The validated method was used to study the pharmacokinetic profile of salidroside in rat plasma after intravenous and oral administration of salidroside. The bioavailability of salidroside in rats is 32.1%.

  1. Development and validation of high-performance liquid chromatography/electrospray ionization mass spectrometry for assay of madecassoside in rat plasma and its application to pharmacokinetic study.

    PubMed

    Han, Wen-Jing; Xia, Yu-Feng; Dai, Yue

    2012-01-01

    A rapid, sensitive and specific high-performance liquid chromatography/electrospray ionization mass spectrometric (LC-ESI-MS) method was developed and validated for the quantification of madecassoside, a major active constituent of Centella asiatica (L.) Urb. herbs, in rat plasma. With paeoniflorin as an internal standard (IS), a simple liquid-liquid extraction process was employed for the plasma sample preparation. Chromatographic separation was achieved within 6 min on a Shim-pack CLC-ODS column using acetonitrile and water (60:40, v/v) containing 0.1% (v/v) formic acid as the mobile phase. The detection was performed by MS with electrospray ionization interface in negative selected ion monitoring (SIM) mode. The linear range was 11-5500 ng/mL with the square regression coefficient (r(2) ) of 0.9995. The lower limit of quantification was 11 ng/mL. The intra- and inter- day precision ranged from 4.99 to 9.03%, and the accuracy was between 95.82 and 111.80%. The average recoveries of madecassoside and IS from spiked plasma samples were >92%. The developed method was successfully applied to the pharmacokinetic study of madecassoside in rats after an oral administration. Copyright © 2011 John Wiley & Sons, Ltd.

  2. Laser-induced ionization of Na vapor

    SciTech Connect

    Wu, R.C.Y.; Judge, D.L.; Roussel, F.; Carre, B.; Breger, P.; Spiess, G.

    1982-01-01

    The production of Na/sub 2//sup +/ ions by off-resonant laser excitation in the 5800-6200A region mainly results from two-photon absorption by the Na/sub 2/ molecule to highly excited gerade states followed by (a) direct ionization by absorbing a third photon or (b) coupling to the molecular Na/sub 2/ D/sup 1/PI..mu.. Rydberg state which is subsequently ionized by absorbing a third photon. This mechanism, i.e., a two-photon resonance three photon ionization process, explains a recent experimental observation of Roussel et al. It is suggested that the very same mechanism is also responsible for a similar observation reported by Polak-Dingels et al in their work using two crossed Na beams. In the latter two studies the laser-induced associative ionization processes were reported to be responsible for producing the Na/sub 2//sup +/ ion. From the ratio of molecular to atomic concentration in the crossed beam experiment of Polak-Dingels et al we estimate that the cross section for producing Na/sub 2//sup +/ through laser-induced associative ionization is at least four orders of magnitude smaller than ionization through the two-photon resonance three photon ionization process in Na/sub 2/ molecules.

  3. Laser-induced ionization of Na vapor

    NASA Astrophysics Data System (ADS)

    Wu, C. Y. Robert; Judge, D. L.; Roussel, F.; Carré, B.; Breger, P.; Spiess, G.

    1982-09-01

    The production of Na2+ ions by off-resonant laser excitation in the 5800-6200Å region mainly results from two-photon absorption by the Na2 molecule to highly excited gerade states followed by (a) direct ionization by absorbing a third photon or (b) coupling to the molecular Na2 D1Πu Rydberg state which is subsequently ionized by absorbing a third photon. This mechanism, i.e., a two-photon resonance three photon ionization process, explains a recent experimental observation of Roussel et al. It is suggested that the very same mechanism is also responsible for a similar observation reported by Polak-Dingels et al in their work using two crossed Na beams. In the latter two studies the laser-induced associative ionization processes were reported to be responsible for producing the Na2+ ion. From the ratio of molecular to atomic concentration in the crossed beam experiment of Polak-Dingels et al. we estimate that the cross section for producing Na2+ through laser-induced associative ionization is at least four orders of magnitude smaller than ionization through the two-photon resonance three photon ionization process in Na2 molecules.

  4. Fuel cell with ionization membrane

    NASA Technical Reports Server (NTRS)

    Hartley, Frank T. (Inventor)

    2007-01-01

    A fuel cell is disclosed comprising an ionization membrane having at least one area through which gas is passed, and which ionizes the gas passing therethrough, and a cathode for receiving the ions generated by the ionization membrane. The ionization membrane may include one or more openings in the membrane with electrodes that are located closer than a mean free path of molecules within the gas to be ionized. Methods of manufacture are also provided.

  5. Fluctuations of induced charge in ionization detectors

    SciTech Connect

    Samedov, V. V.

    2016-12-15

    Fluctuations of charge induced by charge carriers on the detector electrodes make a significant contribution to the energy resolution of ionization detectors, namely, semiconductor detectors and gas and liquid ionization chambers. These fluctuations are determined by the capture of charge carriers, as they drift in the bulk of the detector under the action of an electric field, by traps. In this study, we give a correct mathematical description of charge induction on electrodes of an ionization detector for an arbitrary electric field distribution in the detector with consideration of charge carrier capture by traps. The characteristic function obtained in this study yields the general expression for the distribution function of the charge induced on the detector electrodes. The formulas obtained in this study are useful for analysis of the influence of charge carrier transport on energy resolution of ionization detectors.

  6. Oxidative degradation of bis (2,4,4-trimethylpentyl) dithiophosphinic acid in nitric acid studied by electrospray ionization mass spectrometry

    SciTech Connect

    G. S. Groenewold; D. R. Peterman

    2012-10-01

    Samples of bis(2,4,4-trimethylpentyl)dithiophosphinic acid (Cyanex-301) were analyzed using direct infusion electrospray ionization mass spectrometry. Positive ion spectra of standard and stereo-pure acids displayed ions typical of the unmodified compound, cationized monomeric and dimeric cluster ion species. In addition, a significant ions 2 u less than the dimeric clusters were seen, that correspond to an oxidatively coupled species designated Cyx2 that is observed as H- or Na-cationized species in the electrospray analyses. Based on uncorrected ion intensities, Cyx2 is estimated to account for about 20% of the total in the standard materials. When samples that were contacted with 3 M HNO3 were analyzed, the positive ion spectrum consisted nearly entirely of ions derived from the oxidatively coupled product, indicating that the acid promotes coupling. The negative ion spectra of the standard acids consisted nearly entirely of the conjugate base that is formed by deprotonation of the acids, and cluster ions containing multiple acid molecules. The negative spectra of the HNO3-contacted samples also contained the conjugate base of the unmodified acid, but also two other species that correspond to the dioxo- and perthio- derivatives. It is concluded that HNO3 contact causes significant oxidation, forming at least three major products, Cyx2, the perthio-acid, and the dioxo-acid.

  7. Secondary electrospray ionization-mass spectrometry (SESI-MS) breathprinting of multiple bacterial lung pathogens, a mouse model study

    PubMed Central

    Zhu, Jiangjiang; Bean, Heather D.; Jiménez-Díaz, Jaime

    2013-01-01

    Bacterial pneumonia is one of the leading causes of disease-related morbidity and mortality in the world, in part because the diagnostic tools for pneumonia are slow and ineffective. To improve the diagnosis success rates and treatment outcomes for bacterial lung infections, we are exploring the use of secondary electrospray ionization-mass spectrometry (SESI-MS) breath analysis as a rapid, noninvasive method for determining the etiology of lung infections in situ. Using a murine lung infection model, we demonstrate that SESI-MS breathprints can be used to distinguish mice that are infected with one of seven lung pathogens: Haemophilus influenzae, Klebsiella pneumoniae, Legionella pneumophila, Moraxella catarrhalis, Pseudomonas aeruginosa, Staphylococcus aureus, and Streptococcus pneumoniae, representing the primary causes of bacterial pneumonia worldwide. After applying principal components analysis, we observed that with the first three principal components (primarily comprised of data from 14 peaks), all infections were separable via SESI-MS breathprinting (P < 0.0001). Therefore, we have shown the potential of this SESI-MS approach for rapidly detecting and identifying acute bacterial lung infections in situ via breath analysis. PMID:23519230

  8. Refreshing the Aged Latent Fingerprints with Ionizing Radiation Prior to the Cyanoacrylate Fuming Procedure: A Preliminary Study.

    PubMed

    Ristova, Mimoza M; Radiceska, Pavlina; Bozinov, Igorco; Barandovski, Lambe

    2016-05-01

    One of the crucial factors determining the cyanoacrylate deposit quality over latent fingerprints appeared to be the extent of the humidity. This work focuses on the enhancement/refreshment of age-degraded latent fingerprints by irradiating the samples with UV, X-ray, or thermal neutrons prior to the cyanoacrylate (CA) fuming. Age degradation of latent fingerprints deposited on glass surfaces was examined through the decrease in the number of characteristic minutiae counts over time. A term "critical day" was introduced for the time at which the average number of identifiable minutiae definitions drops to one-half. Fingerprints older than their "critical day" were exposed to either UV, X-ray, or thermal neutrons. Identical reference samples were kept unexposed. All samples, both reference and irradiated, were developed during a single CA fuming procedure. Comparative latent fingerprint analysis showed that exposure to ionizing radiation enhances the CA fuming, yielding a 20-30% increase in average minutiae count. © 2015 American Academy of Forensic Sciences.

  9. A study of the non-covalent interaction between flavonoids and DNA triplexes by electrospray ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Wan, Cuihong; Cui, Meng; Song, Fengrui; Liu, Zhiqiang; Liu, Shuying

    2009-06-01

    The binding interactions of 22 flavonoids (9 aglycones and 13 glycosides) with DNA triplexes were investigated using electrospray ionization mass spectrometry (ESI-MS). The results revealed that the hydroxyl positions of aglycones, the locations and numbers of saccharide, as well as the aglycone skeletons play roles in the triplex-binding properties of flavonoids. The presence of 3-OH, or 3'-OH, or replacement of 4'-OH with methoxy group in aglycones decreased the fraction of bound DNA sharply. Flavonoid glycosides exhibit higher binding affinities towards the DNA triplexes than their aglycone counterparts. Glycosylations of flavones at the 8-C position and isoflavones at the 7-O position show higher binding affinities than those on the other positions of ring A of aglycones. Glycosylation with a disaccharide on C3 position of flavonol results in higher binding affinity than that with monosaccharide. Flexibility of the ring B is favorable for its interaction with DNA triplex. According to sustained off-resonance irradiation collision-induced dissociation (SORI-CID) experiments, glycosylation and non-planarity of flavonoid aglycones lead to different dissociation pathways of the flavonoid/triplex complexes. The differences between dissociation patterns suggest different DNA-binding modes or DNA-binding affinities. Although the exact binding geometry of the flavonoid-triplex complexes cannot be specified, the results may be helpful for understanding the triplex-binding properties of flavonoids and give a clue to design of triplex-binding ligands.

  10. Photoneutron production of a Siemens Primus linear accelerator studied by Monte Carlo methods and a paired magnesium and boron coated magnesium ionization chamber system.

    PubMed

    Becker, J; Brunckhorst, E; Schmidt, R

    2007-11-07

    When radiotherapy with photon energies greater than 10 MV is performed neutrons contaminate the photon beam. In this paper the neutron contamination of the 15 MV photon mode of the Siemens Primus accelerator was studied. The Monte Carlo code MCNPX was used for the description of the treatment head and treatment room. The Monte Carlo results were verified by studying the photon depth dose curve and beam profiles in a water phantom. After these verifications the locations of neutron production were studied and the neutron source spectrum and strength were calculated. The neutron response of the paired Mg/Ar and MgB/Ar ionization chamber system was calculated and experimentally verified for two experimental set-ups. The paired chamber system allowed us to measure neutrons inside the field borders and allowed rapid and point wise measurement in contrast to other methods of neutron detection.

  11. Ionizing radiation and cancer prevention.

    PubMed Central

    Hoel, D G

    1995-01-01

    Ionizing radiation long has been recognized as a cause of cancer. Among environmental cancer risks, radiation is unique in the variety of organs and tissues that it can affect. Numerous epidemiological studies with good dosimetry provide the basis for cancer risk estimation, including quantitative information derived from observed dose-response relationships. The amount of cancer attributable to ionizing radiation is difficult to estimate, but numbers such as 1 to 3% have been suggested. Some radiation-induced cancers attributable to naturally occurring exposures, such as cosmic and terrestrial radiation, are not preventable. The major natural radiation exposure, radon, can often be reduced, especially in the home, but not entirely eliminated. Medical use of radiation constitutes the other main category of exposure; because of the importance of its benefits to one's health, the appropriate prevention strategy is to simply work to minimize exposures. PMID:8741791

  12. Chemi-ionization for Enhanced Plasma Densities

    NASA Astrophysics Data System (ADS)

    Ard, S.

    2016-12-01

    The Air Force has long considered ways of creating enhanced plasma density as a method of mitigating the detrimental effects of ionospheric density irregularities. Numerous easily photo-ionizable molecules have been released for study in this regard, yet this approach is inherently limited to daytime use. Recently attention has turned towards chemi-ionization. Several lanthanide metal oxides have bond strengths greater than their IP, such that M + O → MO+ + e- becomes energetically accessible. In 2013 the Metal Oxide Space Cloud (MOSC) mission released vaporized samarium in the lower ionosphere to study its potential as a chemi-ionization agent with atomic oxygen. While successful at producing enhanced densities, several results created questions about the underlying chemistry. This talk will focus on our lab's efforts supporting these releases, both in analysis of the principal thermochemistry and its effects on assessment of previous results, as well as ongoing experiments considering the potential of other chemi-ionization systems for future experiments.

  13. Photochemistry of the indoor air pollutant acetone on Degussa P25 TiO2 studied by chemical ionization mass spectrometry.

    PubMed

    Schmidt, Catherine M; Buchbinder, Avram M; Weitz, Eric; Geiger, Franz M

    2007-12-20

    We have used chemical ionization mass spectrometry (CIMS) to study the adsorption and photochemistry of several oxygenated organic species adsorbed to Degussa P25 TiO2, an inexpensive catalyst that can be used to mineralize volatile organic compounds. The molecules examined in this work include the common indoor air pollutant acetone and several of its homologs and possible oxidation and condensation products that may be formed during the adsorption and/or photocatalytic degradation of acetone on titanium dioxide catalysts. We report nonreactive uptake coefficients for acetone, formic acid, acetic acid, mesityl oxide, and diacetone alcohol, and results from photochemical studies that quantify, on a per-molecule basis, the room-temperature photocatalytic conversion of the species under investigation to CO2 and related oxidation products. The data presented here imply that catalytic surfaces that enhance formate and acetate production from acetone precursors will facilitate the photocatalytic remediation of acetone in indoor environments, even at room temperature.

  14. Low-density ionization behavior

    SciTech Connect

    Baker, G.A. Jr.

    1995-04-01

    As part of a continuing study of the physics of matter under extreme conditions, I give some results on matter at extremely low density. In particular I compare a quantum mechanical calculation of the pressure for atomic hydrogen with the corresponding pressure given by Thomas-Fermi theory. (This calculation differs from the ``confined atom`` approximation in a physically significant way.) Since Thomas-Fermi theory in some sense, represents the case of infinite nuclear charge, these cases should represent extremes. Comparison is also made with Saha theory, which considers ionization from a chemical point of view, but is weak on excited-state effects. In this theory, the pressure undergoes rapid variation as electron ionization levels are passed. This effect is in contrast to the smooth behavior of the Thomas-Fermi fixed temperature, complete ionization occurs in the low density limit, I study the case where the temperature goes appropriately to zero with the density. Although considerable modification is required, Saha theory is closer to the actual results for this case than is Thomas-Fermi theory.

  15. Intravenous correction of neonatal hypomagnesemia: effect on ionized magnesium.

    PubMed

    Maggioni, A; Orzalesi, M; Mimouni, F B

    1998-04-01

    Neonatal hypomagnesemia is defined as total magnesium (TMg) < or = 0.65 mmol/L (1.6 mg/dl). However, magnesium (Mg) deficiency and sufficiency overlap at serum values of 0.57 to 0.74 mmol/L (1.4 to 1.8 mg/dl). We hypothesized that (1) some infants with TMg < or = 0.65 mmol/L (1.6 mg/dl) have normal ionized Mg values (normal neonatal range 0.40 to 0.56 mmol/L (0.97 to 1.36 mg/dl)); (2) the dose (6.0 mg of elemental Mg/kg) used to correct hypomagnesemia does not lead to elevation of ionized Mg; (3) after intravenous magnesium sulfate infusion, ionized calcium increases in patients with low baseline ionized Mg and decreases in patients with normal baseline ionized Mg. We recruited 22 neonates with TMg < or = 1.6 mg/dl. They received intravenous sulfate (6 mg elemental Mg/kg) over a 1-hour period. Serum TMg, ionized Mg, and ionized Ca were measured before and after magnesium sulfate infusion. An ion-selective electrode was used to allow direct measurement of ionized Mg and ionized Ca. Thirteen (59%) of 22 neonates with TMg < or = 0.65 mmol/L (1.6 mg/dl) had normal IMg. In 7 (31%) of 22 cases ionized Mg increased slightly above 0.56 mmol/L (1.36 mg/dl); the maximum value was 0.61 mmol/L (1.48 mg/dl). The change in ionized Ca concentrations and the baseline ionized Mg value were inversely correlated (r = -0.79; p < 0.0001). (1) Measurement of ionized Mg should prevent overdiagnosis and treatment of hypomagnesemia. (2) The dose used in this study is safe. (3) Ionized Mg concentrations are inversely correlated to the response of ionized Ca concentrations to an Mg load.

  16. Crystallographic study of hydration of an internal cavity in engineered proteins with buried polar or ionizable groups.

    PubMed

    Schlessman, Jamie L; Abe, Colby; Gittis, Apostolos; Karp, Daniel A; Dolan, Michael A; García-Moreno E, Bertrand

    2008-04-15

    Although internal water molecules are essential for the structure and function of many proteins, the structural and physical factors that govern internal hydration are poorly understood. We have examined the molecular determinants of internal hydration systematically, by solving the crystal structures of variants of staphylococcal nuclease with Gln-66, Asn-66, and Tyr-66 at cryo (100 K) and room (298 K) temperatures, and comparing them with existing cryo and room temperature structures of variants with Glu-66, Asp-66, Lys-66, Glu-92 or Lys-92 obtained under conditions of pH where the internal ionizable groups are in the neutral state. At cryogenic temperatures the polar moieties of all these internal side chains are hydrated except in the cases of Lys-66 and Lys-92. At room temperature the internal water molecules were observed only in variants with Glu-66 and Tyr-66; water molecules in the other variants are probably present but they are disordered and therefore undetectable crystallographically. Each internal water molecule establishes between 3 and 5 hydrogen bonds with the protein or with other internal water molecules. The strength of interactions between internal polar side chains and water molecules seems to decrease from carboxylic acids to amides to amines. Low temperature, low cavity volume, and the presence of oxygen atoms in the cavity increase the positional stability of internal water molecules. This set of structures and the physical insight they contribute into internal hydration will be useful for the development and benchmarking of computational methods for artificial hydration of pockets, cavities, and active sites in proteins.

  17. Ambient ionization mass spectrometry

    NASA Astrophysics Data System (ADS)

    Lebedev, A. T.

    2015-07-01

    Ambient ionization mass spectrometry emerged as a new scientific discipline only about ten years ago. A considerable body of information has been reported since that time. Keeping the sensitivity, performance and informativity of classical mass spectrometry methods, the new approach made it possible to eliminate laborious sample preparation procedures and triggered the development of miniaturized instruments to work directly in the field. The review concerns the theoretical foundations and design of ambient ionization methods. Their advantages and drawbacks, as well as prospects for application in chemistry, biology, medicine, environmetal analysis, etc., are discussed. The bibliography includes 194 references.

  18. Theory of dissociative tunneling ionization

    NASA Astrophysics Data System (ADS)

    Svensmark, Jens; Tolstikhin, Oleg I.; Madsen, Lars Bojer

    2016-05-01

    We present a theoretical study of the dissociative tunneling ionization process. Analytic expressions for the nuclear kinetic energy distribution of the ionization rates are derived. A particularly simple expression for the spectrum is found by using the Born-Oppenheimer (BO) approximation in conjunction with the reflection principle. These spectra are compared to exact non-BO ab initio spectra obtained through model calculations with a quantum mechanical treatment of both the electronic and nuclear degrees of freedom. In the regime where the BO approximation is applicable, imaging of the BO nuclear wave function is demonstrated to be possible through reverse use of the reflection principle, when accounting appropriately for the electronic ionization rate. A qualitative difference between the exact and BO wave functions in the asymptotic region of large electronic distances is shown. Additionally, the behavior of the wave function across the turning line is seen to be reminiscent of light refraction. For weak fields, where the BO approximation does not apply, the weak-field asymptotic theory describes the spectrum accurately.

  19. Ionization and positronium formation in noble gases

    SciTech Connect

    Marler, J.P.; Sullivan, J.P.; Surko, C.M.

    2005-02-01

    Absolute measurements are presented for the positron-impact cross sections for direct ionization and positronium formation of noble gas atoms in the range of energies from threshold to 90 eV. The experiment uses a cold, trap-based positron beam and the technique of studying positron scattering in a strong magnetic field. The current data show generally good, quantitative agreement with previous measurements taken using a qualitatively different method. However, significant differences in the cross sections for both direct ionization and positronium formation are also observed. An analysis is presented that yields another, independent measurement of the direct ionization and positronium formation cross sections that is in agreement with the present, direct measurements to within {+-}10% for argon, krypton, and xenon. Comparison with available theoretical predictions yields good quantitative agreement for direct ionization cross sections, and qualitative agreement in the case of positronium formation.

  20. DIVALENT LANTHANIDE CHEMISTRY; BIS (PENTAMETHYLCYCLOPENTADIENYL) EUROPIUM(II) AND YTTERBIUM(II) DERIVATIVES: CRYSTAL STRUCTURE OF BIS(PENTAMETHYLCYCLOPENTADIENYL) YTTERBIUM (II)TETRAHYDROFURAN HEMI (TOLUENE) AT 176K

    SciTech Connect

    Tilley, T.Don; Andersen, Richard A.; Spencer, Brock; Ruben, Helena; Zalkin, Allan; Templeton, David H.

    1980-04-01

    Red, paramagnetic ({mu}{sub B} = 7.99 B.M., 5-50K) bis(pentamethylcyclopentadienyl) europium (II)(tetrahydrofuran)(diethylether), (Me{sub 5}C{sub 5}){sub 2}Eu(THF)(Et{sub 2}O) is isolated from reaction of three molar equivalents of sodium pentamethylcyclopentadienide and europium trichloride in refluxing tetrahydrofuran, after crystallization from diethyl ether. The monotetrahydrofuran complex, (Me{sub 5}C{sub 5}){sub 2}Eu(THF), may be isolated by use of toluene rather than diethyl ether as the crystallization solvent. Red, diamagnetic bis(pentamethylcyclopentadienyl)ytterbium(II)(tetrahydrofuran) is isolated from the reaction of ytterbium dichloride and sodium pentamethylcyclopentadienide in refluxing tetrahydrofuran. The diethyl ether complex, (Me{sub 5}C{sub 5}){sub 2}Yb(OEt{sub 2}), may be isolated by crystallization of the tetrahydrofuran complex from diethylether, The hemi-toluene complex, (Me{sub 5}C{sub 5}){sub 2} Yb(THF) {center_dot} 1/2 toluene, can be isolated by recrystallization of the tetrahydrofuran complex from toluene. As these divalent metallocenes are the first hydrocarbon-soluble lanthanide derivatives to be isolated we have examined the latter complex by X-ray crystallography. Crystals of (Me{sub 5}C{sub 5}){sub 2}Yb(OC{sub 4}H{sub 8}) {center_dot} 1/2(C{sub 6}H{sub 5}cH{sub 3}) crystalline in the monoclinic system, P2{sub 1}/n, with a = 11.358(8) {angstrom}, b = 21.756(19) {angstrom}, c = 10.691(7) {angstrom}, and {beta} = 101.84(5){sup o} at 176K. For Z = 4 the calculated density is 1.37 g cm{sup -3}. The ytterbium atom is coordinated to the oxygen atom of a tetrahydrofuran molecule and to two pentamethyl cyclopentadienyl rings. The molecule has approximate c{sub 2} symmetry about the Yb-0 bond. The Yb-0 distance is 2.41 {angstrom}, the Yb-C distances average 2.66 {angstrom}, and the Yb-Cp (centroid) distances average 2.37 {angstrom}. The Me{sub 5}C{sub 5} rings are in a staggered configuration with respect to each other. The methyl groups of