An Exploratory Case Study of Information-Sharing and Collaboration within Air Force Supply Chain Management

DTIC Science & Technology

2006-03-01

International Journal of Production Economics , Vol. 93-94, pp. 53-99, 2005. -----. “Approximate...Optimization of a Two-level Distribution Inventory System,” International Journal of Production Economics , Vol. 81-81, pp. 545-553, 2003...Scaling Down Multi-Echelon Inventory Problems,” International Journal of Production Economics , Vol. 71, pp. 255-261, 2001. Axsater, Sven

A comparison of precision mobile drip irrigation, LESA and LEPA

USDA-ARS?s Scientific Manuscript database

Precision mobile drip irrigation (PMDI) is a surface drip irrigation system fitted onto moving sprinkler systems that applies water through the driplines as they are dragged across the field. This application method can conserve water by limiting runoff, and reducing evaporative losses since the wat...

SVEN: Informative Visual Representation of Complex Dynamic Structure

DTIC Science & Technology

2014-12-23

nodes in the diagram can be chosen to minimize crossings, but this is the Traveling Salesman Problem , and even if an optimal solution was found, there...visualization problem inherits the challenges of optimizing the aesthetic properties of the static views of the graphs, it also introduces a new problem of how to...inevitable problem of having an overwhelming number of edge crossings for larger datasets is addressed by reducing the opacity of the lines drawn

Are We Listening to Music or Noise? Use of the Lyapunov Exponent for Comprehensive Assessment of Heart Rate Complexity During Hemorrhage in Sedated Conscious Miniature Swine

DTIC Science & Technology

2009-09-01

physiologic mechanisms underlying experimental observations: a practical example☆ Sven Zenker, Andreas Hoeft Department of Anaesthesiology and...to describe experi - mental data (goodness of fit) and its complexity (number of parameters). Their use in macroscopic physiologic investigations...BSP, and BRS could either be identical or vary across interventions, resulting in models with 4 to 12 parameters. After digitizing the experimental data

West Europe Report, No. 2154.

DTIC Science & Technology

1983-06-06

Juan Manuel Fanjul Sedeno; ABC, 12 Apr 83) 105 - d - SWEDEN Palme: Conservatives Threaten Peace by Asking Freedom for East (Sven...the USL in November 1982. Member of the national directorate of the Women’s Democratic Movement. Jose Manuel Tengarrinha (MDP ) University...APU candidate for Castelo Branco. Resumed his duties with the PCP Parliamentary Group. Member of the PCP since 1957. Manuel Lopes (Independent

West Europe Report

DTIC Science & Technology

1987-05-13

ENERGY SWEDEN Nuclear Power Phase -Out: Poll Results, Carlsson Approach (DAGENS NYHETER, 8 Mar 87) 87 Poll Shows Opinion Split, by Sven...This happened in 1976, when a group of land- locked states led by Austria, but with a strong East European element, tried to gain control over...minister of economic affairs, by Pierre Loppe and Francis Van de Woestyne; "Mark Eyskens: A New Tax System in 1988" first paragraph is LA LIBRE

An Analysis of the President’s Budgetary Proposals for Fiscal Year 2010

DTIC Science & Technology

2009-06-01

Ozanne, Frank Russek, Marika Santoro, Kurt Seibert, Sven Sinclair, and David Weiner carried out the modeling . Barry Blom of CBO’s Projections Unit...Baseline Policy Assumptions 15 Ways in Which the President’s Proposals Would Affect the Economy 15 The Models and Their Results 21 The Potential Economic...Effects of Selected Proposals in the President’s 2010 Budget 27 The Models Used to Analyze the Supply-Side Macroeconomic Effects of the President’s

BKCASE(TM) Body of Knowledge and Curriculum to Advance Systems Engineering

DTIC Science & Technology

2010-04-28

Lawson, Lawson Konsult AB, Sweden Johann Amsenga, Eclipse RDC, South Africa Alex Lee , Defence Science and Technology Agency, Singapore Erik Aslaksen...Engineering Division, US Tim Ferris, University of South Australia and INCOSE, Australia Jean-Claude Roussel, EADS, France Kevin Forsberg, Center for...Systems Management and INCOSE, US Sven-Olaf Schulze, Berner & Mattner Systemtechnik GmbH, Germany Richard Freeman, Air Force Center for Systems

Social Contributions to the Equilibration of Action Schemes: A Longitudinal Study of Locomotion.

ERIC Educational Resources Information Center

Lightfoot, Cynthia

According to Jaan Valsiner, development takes place within culturally structured environments jointly organized by the activities of children and the people around them. When overlap between promoted activity and the child's zone of proximal development exists, the structure of action that results from the interplay of the two is internalized by…

Robust Bayesian clustering.

PubMed

Archambeau, Cédric; Verleysen, Michel

2007-01-01

A new variational Bayesian learning algorithm for Student-t mixture models is introduced. This algorithm leads to (i) robust density estimation, (ii) robust clustering and (iii) robust automatic model selection. Gaussian mixture models are learning machines which are based on a divide-and-conquer approach. They are commonly used for density estimation and clustering tasks, but are sensitive to outliers. The Student-t distribution has heavier tails than the Gaussian distribution and is therefore less sensitive to any departure of the empirical distribution from Gaussianity. As a consequence, the Student-t distribution is suitable for constructing robust mixture models. In this work, we formalize the Bayesian Student-t mixture model as a latent variable model in a different way from Svensén and Bishop [Svensén, M., & Bishop, C. M. (2005). Robust Bayesian mixture modelling. Neurocomputing, 64, 235-252]. The main difference resides in the fact that it is not necessary to assume a factorized approximation of the posterior distribution on the latent indicator variables and the latent scale variables in order to obtain a tractable solution. Not neglecting the correlations between these unobserved random variables leads to a Bayesian model having an increased robustness. Furthermore, it is expected that the lower bound on the log-evidence is tighter. Based on this bound, the model complexity, i.e. the number of components in the mixture, can be inferred with a higher confidence.

Quantum optics. Gravity meets quantum physics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adams, Bernhard W.

2015-02-27

Albert Einstein’s general theory of relativity is a classical formulation but a quantum mechanical description of gravitational forces is needed, not only to investigate the coupling of classical and quantum systems but simply to give a more complete description of our physical surroundings. In this issue of Nature Photonics, Wen-Te Liao and Sven Ahrens reveal a link between quantum and gravitational physics. They propose that in the quantum-optical effect of superradiance, the world line of electromagnetic radiation is changed by the presence of a gravitational field.

Stationary and non-stationary extreme value modeling of extreme temperature in Malaysia

NASA Astrophysics Data System (ADS)

Hasan, Husna; Salleh, Nur Hanim Mohd; Kassim, Suraiya

2014-09-01

Extreme annual temperature of eighteen stations in Malaysia is fitted to the Generalized Extreme Value distribution. Stationary and non-stationary models with trend are considered for each station and the Likelihood Ratio test is used to determine the best-fitting model. Results show that three out of eighteen stations i.e. Bayan Lepas, Labuan and Subang favor a model which is linear in the location parameter. A hierarchical cluster analysis is employed to investigate the existence of similar behavior among the stations. Three distinct clusters are found in which one of them consists of the stations that favor the non-stationary model. T-year estimated return levels of the extreme temperature are provided based on the chosen models.

Application of Markov chain model to daily maximum temperature for thermal comfort in Malaysia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nordin, Muhamad Asyraf bin Che; Hassan, Husna

2015-10-22

The Markov chain’s first order principle has been widely used to model various meteorological fields, for prediction purposes. In this study, a 14-year (2000-2013) data of daily maximum temperatures in Bayan Lepas were used. Earlier studies showed that the outdoor thermal comfort range based on physiologically equivalent temperature (PET) index in Malaysia is less than 34°C, thus the data obtained were classified into two state: normal state (within thermal comfort range) and hot state (above thermal comfort range). The long-run results show the probability of daily temperature exceed TCR will be only 2.2%. On the other hand, the probability dailymore » temperature within TCR will be 97.8%.« less

Identification and characterization of Burkholderia multivorans CCA53.

PubMed

Akita, Hironaga; Kimura, Zen-Ichiro; Yusoff, Mohd Zulkhairi Mohd; Nakashima, Nobutaka; Hoshino, Tamotsu

2017-07-06

A lignin-degrading bacterium, Burkholderia sp. CCA53, was previously isolated from leaf soil. The purpose of this study was to determine phenotypic and biochemical features of Burkholderia sp. CCA53. Multilocus sequence typing (MLST) analysis based on fragments of the atpD, gltD, gyrB, lepA, recA and trpB gene sequences was performed to identify Burkholderia sp. CCA53. The MLST analysis revealed that Burkholderia sp. CCA53 was tightly clustered with B. multivorans ATCC BAA-247 T . The quinone and cellular fatty acid profiles, carbon source utilization, growth temperature and pH were consistent with the characteristics of B. multivorans species. Burkholderia sp. CCA53 was therefore identified as B. multivorans CCA53.

Antioxidant activities of polysaccharides from Lentinus edodes and their significance for disease prevention.

PubMed

Chen, Huoliang; Ju, Ying; Li, Junjie; Yu, Min

2012-01-01

The crude polysaccharide (LEP) was extracted by hot water from the fruiting bodies of Lentinus edodes, and further purified by DEAE-cellulose and Sepharose CL-6B chromatography, giving three polysaccharide fractions coded as LEPA1, LEPB1 and LEPC1. In this study, their chemical and physical characteristics of polysaccharide fractions and antioxidant capacities, including scavenging activity against hydroxyl radicals, superoxide radicals and Fe(2+)-chelating ability, were valuated. The results showed that LEPC1 exhibited significantly antioxidant activity at a concentration-dependent manner. Therefore these results indicated that the water-extractable polysaccharide fraction was a potent antioxidant and could be developed to be new health medicine for fighting against various human diseases. Copyright © 2011 Elsevier B.V. All rights reserved.

Generation of diversity in Streptococcus mutans genes demonstrated by MLST.

PubMed

Do, Thuy; Gilbert, Steven C; Clark, Douglas; Ali, Farida; Fatturi Parolo, Clarissa C; Maltz, Marisa; Russell, Roy R; Holbrook, Peter; Wade, William G; Beighton, David

2010-02-05

Streptococcus mutans, consisting of serotypes c, e, f and k, is an oral aciduric organism associated with the initiation and progression of dental caries. A total of 135 independent Streptococcus mutans strains from caries-free and caries-active subjects isolated from various geographical locations were examined in two versions of an MLST scheme consisting of either 6 housekeeping genes [accC (acetyl-CoA carboxylase biotin carboxylase subunit), gki (glucokinase), lepA (GTP-binding protein), recP (transketolase), sodA (superoxide dismutase), and tyrS (tyrosyl-tRNA synthetase)] or the housekeeping genes supplemented with 2 extracellular putative virulence genes [gtfB (glucosyltransferase B) and spaP (surface protein antigen I/II)] to increase sequence type diversity. The number of alleles found varied between 20 (lepA) and 37 (spaP). Overall, 121 sequence types (STs) were defined using the housekeeping genes alone and 122 with all genes. However pi, nucleotide diversity per site, was low for all loci being in the range 0.019-0.007. The virulence genes exhibited the greatest nucleotide diversity and the recombination/mutation ratio was 0.67 [95% confidence interval 0.3-1.15] compared to 8.3 [95% confidence interval 5.0-14.5] for the 6 concatenated housekeeping genes alone. The ML trees generated for individual MLST loci were significantly incongruent and not significantly different from random trees. Analysis using ClonalFrame indicated that the majority of isolates were singletons and no evidence for a clonal structure or evidence to support serotype c strains as the ancestral S. mutans strain was apparent. There was also no evidence of a geographical distribution of individual isolates or that particular isolate clusters were associated with caries. The overall low sequence diversity suggests that S. mutans is a newly emerged species which has not accumulated large numbers of mutations but those that have occurred have been shuffled as a consequence of intra

Modeling annual extreme temperature using generalized extreme value distribution: A case study in Malaysia

NASA Astrophysics Data System (ADS)

Hasan, Husna; Salam, Norfatin; Kassim, Suraiya

2013-04-01

Extreme temperature of several stations in Malaysia is modeled by fitting the annual maximum to the Generalized Extreme Value (GEV) distribution. The Augmented Dickey Fuller (ADF) and Phillips Perron (PP) tests are used to detect stochastic trends among the stations. The Mann-Kendall (MK) test suggests a non-stationary model. Three models are considered for stations with trend and the Likelihood Ratio test is used to determine the best-fitting model. The results show that Subang and Bayan Lepas stations favour a model which is linear for the location parameters while Kota Kinabalu and Sibu stations are suitable with a model in the logarithm of the scale parameters. The return level is the level of events (maximum temperature) which is expected to be exceeded once, on average, in a given number of years, is obtained.

US National Economic Security in a Global Market

DTIC Science & Technology

1990-01-01

13 (D) the Secretary of Commerce , 14 ( E ) the Secretary of Treasury, 15 (F) the United States Trade Representative, 16 and _ 17 (G) the Director of...OTe F!LE COPY --- National Security Program 00 N US NATIONAL ECONOMIC SECURITY IN A GLOBAL MARKET :I . DTIC ELECTE JAN14 1991 m S E D HARVARD...importantly, will become 5 I I ,,!"C is merica _ _ _ _ 44% 5AlAN leact rustwrthv __ 29% ’,’EST (E7,1RM.’y ,a ]i,- :. . 8 %FFR ANC E - 5% BRITAIN Does Jaan

Daily accumulation rates of marine debris on sub-Antarctic island beaches.

PubMed

Eriksson, Cecilia; Burton, Harry; Fitch, Stuart; Schulz, Martin; van den Hoff, John

2013-01-15

The worlds' oceans contain a large but unknown amount of plastic debris. We made daily collections of marine debris stranded at two sub-Antarctic islands to establish (a) physical causes of strandings, and (b) a sampling protocol to better estimate the oceans' plastic loading. Accumulation rates at some beaches were dependent on tide and onshore winds. Most of the 6389 items collected were plastic (Macquarie 95%, Heard 94%) and discarded or lost fishing gear comprised 22% of those plastic items. Stalked barnacles (Lepas spp.) were a regular attachment on Macquarie debris but not at Heard Island. The daily accumulation rate of plastic debris on Macquarie Island was an order of magnitude higher than that estimated from monthly surveys during the same 4 months in the previous 5 years. This finding suggests that estimates of the oceans' plastic loading are an order of magnitude too low. Copyright © 2012 Elsevier Ltd. All rights reserved.

Oceanic barnacles act as foundation species on plastic debris: implications for marine dispersal.

PubMed

Gil, Michael A; Pfaller, Joseph B

2016-01-27

Plastic has emerged as an abundant, stable substratum for oceanic dispersal of organisms via rafting. However, the ecological mechanisms underlying community diversity on plastic debris remain poorly understood. On a cruise from California to Hawai'i, we surveyed plastic debris, some likely originating from the 2011 Tōhoku tsunami, to examine the relationship between rafting community diversity and both habitat area and stalked barnacle (Lepas spp.) abundance. For sessile taxa richness, we observed an interaction in which the positive effect of debris area weakened the negative effect of barnacle cover. In contrast, for mobile taxa richness, including cohabiting species from opposite sides of the Pacific Ocean, barnacle abundance had a positive effect that was strongest at smaller debris sizes. These findings suggest that barnacles, through interactions with habitat area, have trait-dependent effects on other species, serving as both foundation species and competitors, mediating the diversity and dispersal potential of marine organisms on plastic debris.

Oceanic barnacles act as foundation species on plastic debris: implications for marine dispersal

PubMed Central

Gil, Michael A.; Pfaller, Joseph B.

2016-01-01

Plastic has emerged as an abundant, stable substratum for oceanic dispersal of organisms via rafting. However, the ecological mechanisms underlying community diversity on plastic debris remain poorly understood. On a cruise from California to Hawai’i, we surveyed plastic debris, some likely originating from the 2011 Tōhoku tsunami, to examine the relationship between rafting community diversity and both habitat area and stalked barnacle (Lepas spp.) abundance. For sessile taxa richness, we observed an interaction in which the positive effect of debris area weakened the negative effect of barnacle cover. In contrast, for mobile taxa richness, including cohabiting species from opposite sides of the Pacific Ocean, barnacle abundance had a positive effect that was strongest at smaller debris sizes. These findings suggest that barnacles, through interactions with habitat area, have trait-dependent effects on other species, serving as both foundation species and competitors, mediating the diversity and dispersal potential of marine organisms on plastic debris. PMID:26813348

Pattern of homicidal deaths autopsied at Penang Hospital, Malaysia, 2007-2009: a preliminary study.

PubMed

Bhupinder, S; Kumara, T K; Syed, A M

2010-12-01

This article describes the homicide pattern in Penang Island, Malaysia over a three-year period (2007-2009). 65 homicide autopsies were performed at the Department of Forensic Medicine, Penang Hospital over the study period. The homicide rates ranged from 0.01 to 0.09/1000 population, the highest being in the Indian ethnic group. The majority (37%) of victims were in the 20-39 years age group. The male: female ratio was 3:1. The majority of deaths were caused by blunt instruments (46%), followed by stab/slash wounds (25%) and asphyxiation (12%). 63% of homicides occurred in areas served by the police stations at Jalan Patani (23.1%), Sg. Nibong (16.9%), Central (12.3%) and Bayan Lepas (10.9%). 56 (86%) victims were brought in dead to the hospital, while 9 (14%) died after admission. Most (39%) incidences occurred in the morning. The methods of homicide were different from Kuala Lumpur, another highly urbanised area of Malaysia.

Towards a better life for the young workers. An education project in Malaysia.

PubMed

Knutsen, K

1978-06-01

Attention in this discussion focuses on Malaysia's education project, the Young Workers Community Education Project (YWCEP). At the Community Hall of Bayan Lepas, the YWCEP Center, about 60 local residents with more than half of them young industrial workers, are gathered for a half day forum on a Sunday morning. The subject is the current statewide industrial development program and its socioeconomic implications for the local community. The 2nd scene is at the Project Center on a Wednesday afternoon. 1 of 3 conversational English classes is in session. The 3rd scene is a bus carrying more than 30 young workers on a trip. The final scene is at a hostel provided by 1 of the factories for its workers. It is an opportunity for young workers to talk about their problems at work and to seek information on the ongoing activities sponsored by the Project. At first glance these programs and activities appear the same as those organized by similar service groups throughout industrial complexes in Malaysia over the past 5-10 years. What makes the YWCEP different and exciting is the approach to the problem of facilitating "A Better Life for Young Workers." The Project views the lives of the workers as a whole. This is reflected in the project design which attempts to relate the economic, the social, and the environmental dimensions of their lives in 1 integrated net of work modules. 1 basic goal of the Project is to facilitate individual participation in group activities, since this has been identified as a crucial need of the target group. The YWCEP is based on the conviction that the participants themselves must be involved at all levels of the Project operation, including planning and evaluation. The Project aims at being instrumental in bridging the gap between the young workers and the rest of the community. The YWCEP was conceived as a positive response to the many problems created by the rapid industrialization in the Bayan Lepas area of Penang in the early 1970s. The

Linnaeans outdoors: the transformative role of studying nature 'on the move' and outside.

PubMed

Hodacs, Hanna

2011-06-01

Travelling is an activity closely associated with Carolus Linnaeus (1707-1778) and his circle of students. This article discusses the transformative role of studying nature outdoors (turning novices into naturalists) in eighteenth-century Sweden, using the little-known journeys of Carl Bäck (1760-1776), Sven Anders Hedin (1750-1821) and Johan Lindwall (1743-1796) as examples. On these journeys, through different parts of Sweden in the 1770s, the outdoors was used, simultaneously, as both a classroom and a space for exploration. The article argues that this multifunctional use of the landscape (common within the Linnaean tradition) encouraged a democratization of the consumption of scientific knowledge and also, to some degree, of its production. More generally, the study also addresses issues of how and why science and scientists travel by discussing how botanical knowledge was reproduced and extended 'on the move', and what got senior and junior students moving.

Application of the hybrid ANFIS models for long term wind power density prediction with extrapolation capability.

PubMed

Hossain, Monowar; Mekhilef, Saad; Afifi, Firdaus; Halabi, Laith M; Olatomiwa, Lanre; Seyedmahmoudian, Mehdi; Horan, Ben; Stojcevski, Alex

2018-01-01

In this paper, the suitability and performance of ANFIS (adaptive neuro-fuzzy inference system), ANFIS-PSO (particle swarm optimization), ANFIS-GA (genetic algorithm) and ANFIS-DE (differential evolution) has been investigated for the prediction of monthly and weekly wind power density (WPD) of four different locations named Mersing, Kuala Terengganu, Pulau Langkawi and Bayan Lepas all in Malaysia. For this aim, standalone ANFIS, ANFIS-PSO, ANFIS-GA and ANFIS-DE prediction algorithm are developed in MATLAB platform. The performance of the proposed hybrid ANFIS models is determined by computing different statistical parameters such as mean absolute bias error (MABE), mean absolute percentage error (MAPE), root mean square error (RMSE) and coefficient of determination (R2). The results obtained from ANFIS-PSO and ANFIS-GA enjoy higher performance and accuracy than other models, and they can be suggested for practical application to predict monthly and weekly mean wind power density. Besides, the capability of the proposed hybrid ANFIS models is examined to predict the wind data for the locations where measured wind data are not available, and the results are compared with the measured wind data from nearby stations.

Antimicrobial susceptibility and multilocus sequence typing of Mycoplasma capricolum subsp. capricolum

PubMed Central

Tatay-Dualde, Juan; Prats-van der Ham, Miranda; Paterna, Ana; Sánchez, Antonio; Corrales, Juan Carlos; Contreras, Antonio; Tola, Sebastiana; Gómez-Martin, Ángel

2017-01-01

Mycoplasma capricolum subsp. capricolum is one of the causative agents of contagious agalactia (CA). Nevertheless, there is still a lack of information about its antimicrobial susceptibility and genetic characteristics. Therefore, the aim of this work was to study the antimicrobial and genetic variability of different Mycoplasma capricolum subsp. capricolum field isolates. For this purpose, the growth inhibition effect of 18 antimicrobials and a multilocus sequence typing (MLST) scheme based on five housekeeping genes (fusA, glpQ, gyrB, lepA and rpoB) were performed on 32 selected field isolates from Italy and Spain.The results showed a wide range of growth inhibitory effects for almost all the antimicrobials studied. Macrolides presented lower efficacy inhibiting Mcc growth than in previous works performed on other CA-causative mycoplasmas. Erythromycin was not able to inhibit the growth of any of the studied strains, contrary to doxycycline, which inhibited the growth of all of them from low concentrations. On the other hand, the study of the concatenated genes revealed a high genetic variability among the different Mcc isolates. Hence, these genetic variations were greater than the ones reported in prior works on other mycoplasma species. PMID:28346546

Providencia thailandensis sp. nov., isolated from seafood processing wastewater.

PubMed

Khunthongpan, Suwannee; Sumpavapol, Punnanee; Tanasupawat, Somboon; Benjakul, Soottawat; H-Kittikun, Aran

2013-01-01

The bacterial strain C1112(T) was isolated from seafood processing wastewater collected from a treatment pond of the seafood factory in Songkhla Province, Thailand. Phylogenetic analysis based on concatenated sequences from the 16S rRNA gene and five housekeeping genes, fusA, lepA, leuS, gyrB and ileS respectively showed that the strain C1112(T) belonged to the genus Providencia, and share 91.75% similarity with P. stuartii DSM 4539(T). DNA-DNA hybridization between the strain C1112(T) and P. stuartii KCTC 2568(T) was 48.1% relatedness. Moreover, some results from biochemical properties indicated that the strain C1112(T) was distinguished from the phylogenetically closest relatives. The major fatty acids of the strain C1112(T) were C16:0, iso-C15:0, C14:0 and C17:0 cyclo and the DNA G+C content was 41 mol%. Based on the genotypic and phenotypic considerations, it should be classified as a novel species of the genus Providencia for which the name Providencia thailandensis sp. nov. is proposed. The type strain is C1112(T) (= KCTC 23281(T) =NBRC 106720(T)).

Millimeter-sized marine plastics: a new pelagic habitat for microorganisms and invertebrates.

PubMed

Reisser, Julia; Shaw, Jeremy; Hallegraeff, Gustaaf; Proietti, Maira; Barnes, David K A; Thums, Michele; Wilcox, Chris; Hardesty, Britta Denise; Pattiaratchi, Charitha

2014-01-01

Millimeter-sized plastics are abundant in most marine surface waters, and known to carry fouling organisms that potentially play key roles in the fate and ecological impacts of plastic pollution. In this study we used scanning electron microscopy to characterize biodiversity of organisms on the surface of 68 small floating plastics (length range = 1.7-24.3 mm, median = 3.2 mm) from Australia-wide coastal and oceanic, tropical to temperate sample collections. Diatoms were the most diverse group of plastic colonizers, represented by 14 genera. We also recorded 'epiplastic' coccolithophores (7 genera), bryozoans, barnacles (Lepas spp.), a dinoflagellate (Ceratium), an isopod (Asellota), a marine worm, marine insect eggs (Halobates sp.), as well as rounded, elongated, and spiral cells putatively identified as bacteria, cyanobacteria, and fungi. Furthermore, we observed a variety of plastic surface microtextures, including pits and grooves conforming to the shape of microorganisms, suggesting that biota may play an important role in plastic degradation. This study highlights how anthropogenic millimeter-sized polymers have created a new pelagic habitat for microorganisms and invertebrates. The ecological ramifications of this phenomenon for marine organism dispersal, ocean productivity, and biotransfer of plastic-associated pollutants, remains to be elucidated.

Application of the hybrid ANFIS models for long term wind power density prediction with extrapolation capability

PubMed Central

Mekhilef, Saad; Afifi, Firdaus; Halabi, Laith M.; Olatomiwa, Lanre; Seyedmahmoudian, Mehdi; Stojcevski, Alex

2018-01-01

In this paper, the suitability and performance of ANFIS (adaptive neuro-fuzzy inference system), ANFIS-PSO (particle swarm optimization), ANFIS-GA (genetic algorithm) and ANFIS-DE (differential evolution) has been investigated for the prediction of monthly and weekly wind power density (WPD) of four different locations named Mersing, Kuala Terengganu, Pulau Langkawi and Bayan Lepas all in Malaysia. For this aim, standalone ANFIS, ANFIS-PSO, ANFIS-GA and ANFIS-DE prediction algorithm are developed in MATLAB platform. The performance of the proposed hybrid ANFIS models is determined by computing different statistical parameters such as mean absolute bias error (MABE), mean absolute percentage error (MAPE), root mean square error (RMSE) and coefficient of determination (R2). The results obtained from ANFIS-PSO and ANFIS-GA enjoy higher performance and accuracy than other models, and they can be suggested for practical application to predict monthly and weekly mean wind power density. Besides, the capability of the proposed hybrid ANFIS models is examined to predict the wind data for the locations where measured wind data are not available, and the results are compared with the measured wind data from nearby stations. PMID:29702645

World's Largest Gold Crystal Studied at Los Alamos

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vogel, Sven; Nakotte, Heinz

2014-04-03

When geologist John Rakovan needed better tools to investigate whether a dazzling 217.78-gram piece of gold was in fact the world's largest single-crystal specimen - a distinguishing factor that would not only drastically increase its market value but also provide a unique research opportunity - he traveled to Los Alamos National Laboratory's Lujan Neutron Scattering Center to peer deep inside the mineral using neutron diffractometry. Neutrons, different from other probes such as X-rays and electrons, are able to penetrate many centimeters deep into most materials. Revealing the inner structure of a crystal without destroying the sample - imperative, as thismore » one is worth an estimated $1.5 million - would allow Rakovan and Lujan Center collaborators Sven Vogel and Heinz Nakotte to prove that this exquisite nugget, which seemed almost too perfect and too big to be real, was a single crystal and hence a creation of nature. Its owner, who lives in the United States, provided the samples to Rakovan to assess the crystallinity of four specimens, all of which had been found decades ago in Venezuela.« less

World's Largest Gold Crystal Studied at Los Alamos

ScienceCinema

Vogel, Sven; Nakotte, Heinz

2018-02-07

When geologist John Rakovan needed better tools to investigate whether a dazzling 217.78-gram piece of gold was in fact the world's largest single-crystal specimen - a distinguishing factor that would not only drastically increase its market value but also provide a unique research opportunity - he traveled to Los Alamos National Laboratory's Lujan Neutron Scattering Center to peer deep inside the mineral using neutron diffractometry. Neutrons, different from other probes such as X-rays and electrons, are able to penetrate many centimeters deep into most materials. Revealing the inner structure of a crystal without destroying the sample - imperative, as this one is worth an estimated $1.5 million - would allow Rakovan and Lujan Center collaborators Sven Vogel and Heinz Nakotte to prove that this exquisite nugget, which seemed almost too perfect and too big to be real, was a single crystal and hence a creation of nature. Its owner, who lives in the United States, provided the samples to Rakovan to assess the crystallinity of four specimens, all of which had been found decades ago in Venezuela.

Tethers in Space

NASA Astrophysics Data System (ADS)

Johnson, Les; Bilén, Sven G.; Gilchrist, Brian E.; Krause, Linda Habash

2017-09-01

This Special Section of Acta Astronautica contains several peer-reviewed papers selected from among those presented at the Fifth International Conference on Tethers in Space (TiS2016). After a hiatus of 21 years since the last Conference on Tethers in Space, TiS2016 brought together experts, practitioners, and other interested in space tethers and related fields. TiS2016 was held May 24-26, 2016 at The University of Michigan in Ann Arbor, Michigan, U.S.A. Leveraging the hard work of a great many volunteers, the conference co-chairs Prof. Brian Gilchrist and Prof. Sven Bilén welcomed an international contingent with authors from the U.S., Canada, Japan, Spain, China, Finland, Estonia, and Italy. The community provided updates on what has transpired since their last gathering by providing lessons learned; describing new technologies and subsystems; and proposing new tether missions and applications. Papers overviewed de-orbit systems, power generation, orbital maneuvering, momentum capture, debris removal, space tugs, space elevators, collision avoidance, and tether dynamics, among others.

Ribosomal elongation factor 4 promotes cell death associated with lethal stress.

PubMed

Li, Liping; Hong, Yuzhi; Luan, Gan; Mosel, Michael; Malik, Muhammad; Drlica, Karl; Zhao, Xilin

2014-12-09

Ribosomal elongation factor 4 (EF4) is highly conserved among bacteria, mitochondria, and chloroplasts. However, the EF4-encoding gene, lepA, is nonessential and its deficiency shows no growth or fitness defect. In purified systems, EF4 back-translocates stalled, posttranslational ribosomes for efficient protein synthesis; consequently, EF4 has a protective role during moderate stress. We were surprised to find that EF4 also has a detrimental role during severe stress: deletion of lepA increased Escherichia coli survival following treatment with several antimicrobials. EF4 contributed to stress-mediated lethality through reactive oxygen species (ROS) because (i) the protective effect of a ΔlepA mutation against lethal antimicrobials was eliminated by anaerobic growth or by agents that block hydroxyl radical accumulation and (ii) the ΔlepA mutation decreased ROS levels stimulated by antimicrobial stress. Epistasis experiments showed that EF4 functions in the same genetic pathway as the MazF toxin, a stress response factor implicated in ROS-mediated cell death. The detrimental action of EF4 required transfer-messenger RNA (tmRNA, which tags truncated proteins for degradation and is known to be inhibited by EF4) and the ClpP protease. Inhibition of a protective, tmRNA/ClpP-mediated degradative activity would allow truncated proteins to indirectly perturb the respiratory chain and thereby provide a potential link between EF4 and ROS. The connection among EF4, MazF, tmRNA, and ROS expands a pathway leading from harsh stress to bacterial self-destruction. The destructive aspect of EF4 plus the protective properties described previously make EF4 a bifunctional factor in a stress response that promotes survival or death, depending on the severity of stress. Translation elongation factor 4 (EF4) is one of the most conserved proteins in nature, but it is dispensable. Lack of strong phenotypes for its genetic knockout has made EF4 an enigma. Recent biochemical work has

Millimeter-Sized Marine Plastics: A New Pelagic Habitat for Microorganisms and Invertebrates

PubMed Central

Reisser, Julia; Shaw, Jeremy; Hallegraeff, Gustaaf; Proietti, Maira; Barnes, David K. A.; Thums, Michele; Wilcox, Chris; Hardesty, Britta Denise; Pattiaratchi, Charitha

2014-01-01

Millimeter-sized plastics are abundant in most marine surface waters, and known to carry fouling organisms that potentially play key roles in the fate and ecological impacts of plastic pollution. In this study we used scanning electron microscopy to characterize biodiversity of organisms on the surface of 68 small floating plastics (length range = 1.7–24.3 mm, median = 3.2 mm) from Australia-wide coastal and oceanic, tropical to temperate sample collections. Diatoms were the most diverse group of plastic colonizers, represented by 14 genera. We also recorded ‘epiplastic’ coccolithophores (7 genera), bryozoans, barnacles (Lepas spp.), a dinoflagellate (Ceratium), an isopod (Asellota), a marine worm, marine insect eggs (Halobates sp.), as well as rounded, elongated, and spiral cells putatively identified as bacteria, cyanobacteria, and fungi. Furthermore, we observed a variety of plastic surface microtextures, including pits and grooves conforming to the shape of microorganisms, suggesting that biota may play an important role in plastic degradation. This study highlights how anthropogenic millimeter-sized polymers have created a new pelagic habitat for microorganisms and invertebrates. The ecological ramifications of this phenomenon for marine organism dispersal, ocean productivity, and biotransfer of plastic-associated pollutants, remains to be elucidated. PMID:24941218

Polymorphisms in the leptin and leptin receptor genes in relation to resting metabolic rate and respiratory quotient in the Québec Family Study.

PubMed

Loos, R J F; Rankinen, T; Chagnon, Y; Tremblay, A; Pérusse, L; Bouchard, C

2006-01-01

Leptin (LEP) is an endocrine hormone that participates in many metabolic pathways, including those associated with the central regulation of energy homeostasis. We examined the associations between polymorphisms in the LEP and leptin receptor (LEPR) genes and resting metabolic rate (RMR) and respiratory quotient (RQ) in the Quebec Family Study. Three polymorphisms in LEPR (K109R, Q223R and K656N) and one in LEP (19A > G) were genotyped in 678 subjects. RMR, RQ at rest and RQ while sitting, standing and walking at 4.5 km/h (RQ45) were adjusted for age, sex, fat mass and fat-free mass. RQ45 was associated with the LEPR-K109R (P = 0.004) and Q223R (P = 0.03) polymorphisms, and RMR showed association with the LEPR-K656N polymorphism (P = 0.006). For the LEP-19A > G polymorphism, no significant associations were observed. However, LEP-A19A homozygotes who were carriers of the LEPR N656 allele had a significantly lower RQ45 compared to other genotype combinations (P for interaction=0.003). These findings suggest that DNA sequence variation in the LEPR gene contributes to human variation in RMR and in the relative rates of substrate oxidation during low-intensity exercise in steady state but not in a resting state.

Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy.

PubMed

den Broeder, Marjo J; Moester, Miriam J B; Kamstra, Jorke H; Cenijn, Peter H; Davidoiu, Valentina; Kamminga, Leonie M; Ariese, Freek; de Boer, Johannes F; Legler, Juliette

2017-04-24

Early life stage exposure to environmental chemicals may play a role in obesity by altering adipogenesis; however, robust in vivo methods to quantify these effects are lacking. The goal of this study was to analyze the effects of developmental exposure to chemicals on adipogenesis in the zebrafish ( Danio rerio ). We used label-free Stimulated Raman Scattering (SRS) microscopy for the first time to image zebrafish adipogenesis at 15 days post fertilization (dpf) and compared standard feed conditions (StF) to a high fat diet (HFD) or high glucose diet (HGD). We also exposed zebrafish embryos to a non-toxic concentration of tributyltin (TBT, 1 nM) or Tris(1,3-dichloroisopropyl)phosphate (TDCiPP, 0.5 µM) from 0-6 dpf and reared larvae to 15 dpf under StF. Potential molecular mechanisms of altered adipogenesis were examined by qPCR. Diet-dependent modulation of adipogenesis was observed, with HFD resulting in a threefold increase in larvae with adipocytes, compared to StF and HGD. Developmental exposure to TBT but not TDCiPP significantly increased adipocyte differentiation. The expression of adipogenic genes such as pparda , lxr and lepa was altered in response to HFD or chemicals. This study shows that SRS microscopy can be successfully applied to zebrafish to visualize and quantify adipogenesis, and is a powerful approach for identifying obesogenic chemicals in vivo.

Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy

PubMed Central

den Broeder, Marjo J.; Moester, Miriam J. B.; Kamstra, Jorke H.; Cenijn, Peter H.; Davidoiu, Valentina; Kamminga, Leonie M.; Ariese, Freek; de Boer, Johannes F.; Legler, Juliette

2017-01-01

Early life stage exposure to environmental chemicals may play a role in obesity by altering adipogenesis; however, robust in vivo methods to quantify these effects are lacking. The goal of this study was to analyze the effects of developmental exposure to chemicals on adipogenesis in the zebrafish (Danio rerio). We used label-free Stimulated Raman Scattering (SRS) microscopy for the first time to image zebrafish adipogenesis at 15 days post fertilization (dpf) and compared standard feed conditions (StF) to a high fat diet (HFD) or high glucose diet (HGD). We also exposed zebrafish embryos to a non-toxic concentration of tributyltin (TBT, 1 nM) or Tris(1,3-dichloroisopropyl)phosphate (TDCiPP, 0.5 µM) from 0–6 dpf and reared larvae to 15 dpf under StF. Potential molecular mechanisms of altered adipogenesis were examined by qPCR. Diet-dependent modulation of adipogenesis was observed, with HFD resulting in a threefold increase in larvae with adipocytes, compared to StF and HGD. Developmental exposure to TBT but not TDCiPP significantly increased adipocyte differentiation. The expression of adipogenic genes such as pparda, lxr and lepa was altered in response to HFD or chemicals. This study shows that SRS microscopy can be successfully applied to zebrafish to visualize and quantify adipogenesis, and is a powerful approach for identifying obesogenic chemicals in vivo. PMID:28441764

A human-hearing-related prediction tool for soundscapes and community noise

NASA Astrophysics Data System (ADS)

Genuit, Klaus

2002-11-01

There are several methods of calculation available for the prediction of the A-weighted sound-pressure level of environmental noise, which are, however, not suitable for a qualified prediction of the residents' annoyance and physiological strain. The subjectively felt noise quality does not only depend on the A-weighted sound-pressure level, but also on other psychoacoustical parameters, such as loudness, roughness, sharpness, etc. In addition to these physical and psychoacoustical aspects of noise, the so-called psychological or cognitive aspects have to be considered, too, which means that the listeners' expectations, their mental attitude, as well as the information content of the noise finally influence the noise quality perceived by the individual persons. Within the scope of a research project SVEN (Sound Quality of Vehicle Exterior Noise), which is promoted by the EC, a new tool has been developed which allows a binaural simulation and prediction of the environmental noise to evaluate the influence of different contributions by the sound events with respect to the psychoacoustical parameters, the spatial distribution, movement, and frequency. By means of this tool it is now possible to consider completely new aspects regarding the audible perception of noise when establishing a soundscape or when planning community noise.

Legionella Pneumophila and Dendrimers-Mediated Antisense Therapy.

PubMed

Pashaei-Asl, Roghiyeh; Khodadadi, Khodadad; Pashaei-Asl, Fatima; Haqshenas, Gholamreza; Ahmadian, Nasser; Pashaiasl, Maryam; Hajihosseini Baghdadabadi, Reza

2017-06-01

Finding novel and effective antibiotics for treatment of Legionella disease is a challenging field. Treatment with antibiotics usually cures Legionella infection; however, if the resultant disease is not timely recognized and treated properly, it leads to poor prognosis and high case fatality rate. Legionella pneumophila DrrA protein (Defects in Rab1 recruitment protein A)/also known as SidM affects host cell vesicular trafficking through modification of the activity of cellular small guanosine triphosphatase )GTPase( Rab (Ras-related in brain) function which facilitates intracellular bacterial replication within a supporter vacuole. Also, Legionella pneumophila LepA and LepB (Legionella effector protein A and B) proteins suppress host-cell Rab1 protein's function resulting in the cell lysis and release of bacteria that subsequently infect neighbour cells. Legionella readily develops resistant to antibiotics and, therefore, new drugs with different modes of action and therapeutic strategic approaches are urgently required among antimicrobial drug therapies;gene therapy is a novel approach for Legionnaires disease treatment. On the contrary to the conventional treatment approaches that target bacterial proteins, new treatment interventions target DNA (Deoxyribonucleic acid), RNA (Ribonucleic acid) species, and different protein families or macromolecular complexes of these components. The above approaches can overcome the problems in therapy of Legionella infections caused by antibiotics resistance pathogens. Targeting Legionella genes involved in manipulating cellular vesicular trafficking using a dendrimer-mediated antisense therapy is a promising approach to inhibit bacterial replication within the target cells.

The Population Size of the Lesser Bandicoot (Bandicota bengalensis) in Three Markets in Penang, Malaysia

PubMed Central

Khairuddin, Nurul Liyana; Raghazli, Razlina; Sah, Shahrul Anuar Mohd; Shafie, Nur Juliani; Azman, Nur Munira

2011-01-01

A study of the population size of Bandicota bengalensis rats in three markets in Penang was conducted from April 2004 through May 2005. Taman Tun Sardon Market (TTS), Batu Lanchang Market (BTLG) and Bayan Lepas Market (BYNLP) were surveyed. Six sampling sessions were conducted in each market for four consecutive nights per session. The total captures of B. bengalensis in TTS, BTLG and BYNLP were 92%, 73% and 89% respectively. The total population of B. bengalensis in TTS was estimated as 265.4 (with a 95% confidence interval of 180.9–424.2). The total population at BTLG was estimated as 69.9 (with a 95% confidence interval of 35.5–148.9). At BYNLP, the total population was estimated as 134.7 (with a 95% confidence interval of 77.8–278.4). In general, adult male rats were captured most frequently at each site (55.19%), followed by adult females (31.69%), juvenile males (9.84%) and juvenile females (3.27%). The results showed that the number of rats captured at each site differed significantly according to sex ratio and maturity (χ2 = 121.45, df = 3, p<0.01). Our results suggest that the population sizes found by the study may not represent the actual population size in each market owing to the low numbers of rats recaptured. This finding might have resulted from the variety of foods available in the markets. PMID:24575219

The Samoa tsunami of 29 September 2009: Field survey in Samoa and preliminary modeling

NASA Astrophysics Data System (ADS)

Borrero, J. C.; Fritz, H. M.; Synolakis, C. E.; Weiss, R.; Okal, E. A.

2010-05-01

The Samoa tsunami of 29 September 2009 caused considerable damage and 146 deaths in the country of [ex-Western] Samoa, where the last comparable event took place in 1917. Following the event, an International Tsunami Survey Team was deployed and surveyed the inundation one week after the tsunami. Our results revealed higher values of run-up and inundation on the Southern shore of Upolu, where run-up reached 14.5 m at Lepa and 11.4 m at Lalomanu, this latter village being eradicated, with a death toll of 61. By contrast, the Northern shore was largely spared. A similar pattern was observed on the island of Savaii, but with lower run-up values, and only 2 deaths. The higher death toll in Samoa, as compared to American Samoa probably results from the combination of terrain morphology (wider coastal plains leading to longer evacuation distances), the absence of a signage project, and an unfortunate reliance on motor vehicles leading to entrapment of victims along roads often parallel to the beach. A number of numerical simulations were conducted using several models of the seismic source; they correctly predict a concentration of tsunami energy at the Southeastern corner of the island of Upolu, but also at its Southwestern end, where surveyed run-up did not exceed 5 m. All models correctly indicate that the northern coast, with the capital Apia, is spared by the tsunami, even though it had reportedly been emphasized during mitigation exercises prior to the event.

Novel Multiplex Real-Time PCR Diagnostic Assay for Identification and Differentiation of Mycobacterium tuberculosis, Mycobacterium canettii, and Mycobacterium tuberculosis Complex Strains▿†

PubMed Central

Reddington, Kate; O'Grady, Justin; Dorai-Raj, Siobhan; Maher, Majella; van Soolingen, Dick; Barry, Thomas

2011-01-01

Tuberculosis (TB) in humans is caused by members of the Mycobacterium tuberculosis complex (MTC). Rapid detection of the MTC is necessary for the timely initiation of antibiotic treatment, while differentiation between members of the complex may be important to guide the appropriate antibiotic treatment and provide epidemiological information. In this study, a multiplex real-time PCR diagnostics assay using novel molecular targets was designed to identify the MTC while simultaneously differentiating between M. tuberculosis and M. canettii. The lepA gene was targeted for the detection of members of the MTC, the wbbl1 gene was used for the differentiation of M. tuberculosis and M. canettii from the remainder of the complex, and a unique region of the M. canettii genome, a possible novel region of difference (RD), was targeted for the specific identification of M. canettii. The multiplex real-time PCR assay was tested using 125 bacterial strains (64 MTC isolates, 44 nontuberculosis mycobacteria [NTM], and 17 other bacteria). The assay was determined to be 100% specific for the mycobacteria tested. Limits of detection of 2.2, 2.17, and 0.73 cell equivalents were determined for M. tuberculosis/M. canettii, the MTC, and M. canettii, respectively, using probit regression analysis. Further validation of this diagnostics assay, using clinical samples, should demonstrate its potential for the rapid, accurate, and sensitive diagnosis of TB caused by M. tuberculosis, M. canettii, and the other members of the MTC. PMID:21123525

PREFACE: 8th International Conference on 3D Radiation Dosimetry (IC3DDose)

NASA Astrophysics Data System (ADS)

Olsson, Lars E.; Bäck, S.; Ceberg, Sofie

2015-01-01

a forum to discuss the latest research and developments in 3D and advanced radiation dosimetry. • Energize and diversify dosimetry research and clinical practice by encouraging interaction and synergy between advanced, 3D, and semi-3D dosimetry techniques. We commend these IC3Dose 2014 conference proceedings to you and strongly believe they include significant contributions to scientific progress in this field. We would like to express our sincere gratitude to everybody involved in making the conference possible, the Scientific committee for their work on the general planning, paper review and program formulation, the distinguished invited speakers for their contributions and the local organizing committee members for all their hard work on the practical preparation for the meeting. Lars E. Olsson, Sven Bäck and Sofie Ceberg Lund University and Skåne University Hospital, Sweden International Scientific Committee Sven Bäck, Sweden (chair) Clive Baldock, Australia Sam Beddar, USA Crister Ceberg, Sweden Yves de Deene, Belgium/Australia Simon Doran, UK Geoffrey Ibbott, USA Andrew Jirasek, Canada Kevin Jordan, Canada Martin Lepage, Canada Daniel Low, USA Mark Oldham, USA Tony Popescu, Canada John Schreiner, Canada Cheng-Shie Wuu, USA David Thwaites, Australia Local Organizing Committee Sofie Ceberg (chair) Lars E. Olsson (conference chair) Fredrik Nordstrom Anneli Edvardsson Anna Karlsson Hauer Anna Bäck

Foods, trophic relationships, and migration of Sooty and Short-tailed Shearwaters associated with squid and large-mesh driftnet fisheries in the North Pacific Ocean

USGS Publications Warehouse

Gould, Patrick J.; Ostrom, Peggy H.; Walker, William

2000-01-01

We salvaged dead birds from high seas driftnets in the Central North Pacific Ocean during a study of the impact of high seas driftnet fishing on marine ecosystems. Digestive tract contents and stable isotopes of nitrogen and carbon in breast muscles of these birds were analyzed to assess the effect of driftnets on the trophic relationships of marine birds. The diets of Sooty (Puffinus griseus) and Short-tailed (P. tenuirostris) Shearwaters associated with high seas driftnets in the transitional region of the North Pacific Ocean overlap broadly. The principal differences between them include 1) Sooties prey more heavily on immature stages of invertebrates, especially the barnacle Lepas fascicularis than do Short-tails, 2) Pacific saury (Cololabis saira) are the primary fish taken by Sooties while lanternfish (Myctophidae) are the primary fish taken by Short-tails, and 3) Sooties take a wider variety of prey than do Short-tails. During the last years of extensive high seas driftnet fishing (early 1990's), both shearwaters augmented their diets with about 15% offal and discards from fishing vessels. Values for stable isotopes of nitrogen and carbon in breast muscle tissues (δ15N and δ15C) indicate the extent and timing of movements of Sooty Shearwaters: including arrival of migrants from the south Pacific (April-May), east to west movement from the eastern Pacific (May-June), and west to east movement from Japan (August-September). Fall migrant Sooties were not detected. The only movements of Short-tails that we detected were a few south-bound migrants in September-November.

Development and evaluation of a multi-locus sequence typing scheme for Mycoplasma synoviae.

PubMed

Dijkman, R; Feberwee, A; Landman, W J M

2016-08-01

Reproducible molecular Mycoplasma synoviae typing techniques with sufficient discriminatory power may help to expand knowledge on its epidemiology and contribute to the improvement of control and eradication programmes of this mycoplasma species. The present study describes the development and validation of a novel multi-locus sequence typing (MLST) scheme for M. synoviae. Thirteen M. synoviae isolates originating from different poultry categories, farms and lesions, were subjected to whole genome sequencing. Their sequences were compared to that of M. synoviae reference strain MS53. A high number of single nucleotide polymorphisms (SNPs) indicating considerable genetic diversity were identified. SNPs were present in over 40 putative target genes for MLST of which five target genes were selected (nanA, uvrA, lepA, ruvB and ugpA) for the MLST scheme. This scheme was evaluated analysing 209 M. synoviae samples from different countries, categories of poultry, farms and lesions. Eleven clonal clusters and 76 different sequence types (STs) were obtained. Clustering occurred following geographical origin, supporting the hypothesis of regional population evolution. M. synoviae samples obtained from epidemiologically linked outbreaks often harboured the same ST. In contrast, multiple M. synoviae lineages were found in samples originating from swollen joints or oviducts from hens that produce eggs with eggshell apex abnormalities indicating that further research is needed to identify the genetic factors of M. synoviae that may explain its variations in tissue tropism and disease inducing potential. Furthermore, MLST proved to have a higher discriminatory power compared to variable lipoprotein and haemagglutinin A typing, which generated 50 different genotypes on the same database.

Simulating the Effects of Widespread Adoption of Efficient Irrigation Technologies on Irrigation Water Use

NASA Astrophysics Data System (ADS)

Kendall, A. D.; Deines, J. M.; Hyndman, D. W.

2017-12-01

Irrigation technologies are changing: becoming more efficient, better managed, and capable of more precise targeting. Widespread adoption of these technologies is shifting water balances and significantly altering the hydrologic cycle in some of the largest irrigated regions in the world, such as the High Plains Aquifer of the USA. There, declining groundwater resources, increased competition from alternate uses, changing surface water supplies, and increased subsidies and incentives are pushing farmers to adopt these new technologies. Their decisions about adoption, irrigation extent, and total water use are largely unrecorded, limiting critical data for what is the single largest consumptive water use globally. Here, we present a novel data fusion of an annual water use and technology database in Kansas with our recent remotely-sensed Annual Irrigation Maps (AIM) dataset to produce a spatially and temporally complete record of these decisions. We then use this fusion to drive the Landscape Hydrologic Model (LHM), which simulates the full terrestrial water cycle at hourly timesteps for large regions. The irrigation module within LHM explicitly simulates each major irrigation technology, allowing for a comprehensive evaluation of changes in irrigation water use over time and space. Here we simulate 2000 - 2016, a period which includes a major increase in the use of modern efficient irrigation technology (such as Low Energy Precision Application, LEPA) as well as both drought and relative wet periods. Impacts on water use are presented through time and space, along with implications for adopting these technologies across the USA and globally.

Prevalence of a koinobiont endoparasitoid Misotermes mindeni (Diptera: Phoridae) in colonies of the fungus-growing termite Macrotermes gilvus (Blattodea: Termitidae) in Malaysia.

PubMed

Foo, Foong-Kuan; Singham, G Veera; Othman, Ahmad Sofiman; Lee, Chow-Yang

2011-10-01

A survey of the infestation rate of colonies of Macrotermes gilvus (Hagen) (Termitidae: Macrotermitinae) with the koinobiont endoparasitoid Misotermes mindeni Disney & Neoh (Diptera: Phoridae) was conducted in Malaysia from September 2009 to January 2011 in the states of Kedah, Penang, Perak, Selangor, Kuala Lumpur, Johor, Terengganu, and Sarawak. Of the 1,125 M. gilvus mounds surveyed, 12.4% contained termites parasitized by M. mindeni and these mounds occurred only in the states of Penang and Perak. High frequencies of mounds containing parasitized termites were found at sites in Penang: Bayan Lepas (21.1%), Minden Campus of Universiti Sains Malaysia ([USM]; 24.5%), Teluk Bahang (28.0%), and Bukit Mertajam (35.0%); the lowest frequency (4.0%) was recorded from Gelugor. The parasitized colonies at all sites were classified as healthy, with exception of several from the Minden Campus of USM (96.4% healthy) and Ayer Itam (87.5% healthy). Most parasitized colonies (71.2%) had a low level of M. mindeni infestation. Only 16.7 and 12.1% of the infested colonies had moderate or high parasite infestation levels, respectively. The height of infected mounds was significantly higher than that of the healthy mounds, but there was no difference between the mound diameters of infested and uninfested mounds. Parasite infestation level was not significantly correlated with mound height or mound diameter. The ambient light intensity at sites with infested mounds was significantly lower than that of uninfested mounds. There was also a significant negative relationship between light intensity and degree of parasitism.

Multilocus sequence analysis of Thermoanaerobacter isolates reveals recombining, but differentiated, populations from geothermal springs of the Uzon Caldera, Kamchatka, Russia

PubMed Central

Wagner, Isaac D.; Varghese, Litty B.; Hemme, Christopher L.; Wiegel, Juergen

2013-01-01

Thermal environments have island-like characteristics and provide a unique opportunity to study population structure and diversity patterns of microbial taxa inhabiting these sites. Strains having ≥98% 16S rRNA gene sequence similarity to the obligately anaerobic Firmicutes Thermoanaerobacter uzonensis were isolated from seven geothermal springs, separated by up to 1600 m, within the Uzon Caldera (Kamchatka, Russian Far East). The intraspecies variation and spatial patterns of diversity for this taxon were assessed by multilocus sequence analysis (MLSA) of 106 strains. Analysis of eight protein-coding loci (gyrB, lepA, leuS, pyrG, recA, recG, rplB, and rpoB) revealed that all loci were polymorphic and that nucleotide substitutions were mostly synonymous. There were 148 variable nucleotide sites across 8003 bp concatenates of the protein-coding loci. While pairwise FST values indicated a small but significant level of genetic differentiation between most subpopulations, there was a negligible relationship between genetic divergence and spatial separation. Strains with the same allelic profile were only isolated from the same hot spring, occasionally from consecutive years, and single locus variant (SLV) sequence types were usually derived from the same spring. While recombination occurred, there was an “epidemic” population structure in which a particular T. uzonensis sequence type rose in frequency relative to the rest of the population. These results demonstrate spatial diversity patterns for an anaerobic bacterial species in a relative small geographic location and reinforce the view that terrestrial geothermal springs are excellent places to look for biogeographic diversity patterns regardless of the involved distances. PMID:23801987

Tropomyosin-related kinase C (TrkC) enhances podocyte migration by ERK-mediated WAVE2 activation.

PubMed

Gromnitza, Sascha; Lepa, Carolin; Weide, Thomas; Schwab, Albrecht; Pavenstädt, Hermann; George, Britta

2018-03-01

Podocyte malfunction is central to glomerular diseases and is marked by defective podocyte intercellular junctions and actin cytoskeletal dynamics. Podocytes share many morphologic features with neurons, so that similar sets of proteins appear to regulate cell process formation. One such protein is the tropomyosin-related kinase C (TrkC). TrkC deficiency in mice leads to proteinuria as a surrogate of defective kidney filter function. Activation of endogenous TrkC by its ligand neurotrophin-3 resulted in increased podocyte migration-a surrogate of podocyte actin dynamics in vivo. Employing a mutagenesis approach, we found that the Src homologous and collagen-like (Shc) binding site Tyr 516 within the TrkC cytoplasmic domain was necessary for TrkC-induced migration of podocytes. TrkC activation led to a mobility shift of Wiskott-Aldrich syndrome family verprolin-homologous protein (WAVE)-2 which is known to orchestrate Arp2/3 activation and actin polymerization. Chemical inactivation of Erk or mutagenesis of 2 of 4 known Erk target sites within WAVE2, Thr 346 and Ser 351 , abolished the TrkC-induced WAVE2 mobility shift. Knockdown of WAVE2 by shRNA abolished TrkC-induced podocyte migration. In summary, TrkC signals to the podocyte actin cytoskeleton to induce migration by phosphorylating WAVE2 Erk dependently. This signaling mechanism may be important for TrkC-mediated cytoskeletal dynamics in podocyte disease.-Gromnitza, S., Lepa, C., Weide, T., Schwab, A., Pavenstädt, H., George, B. Tropomyosin-related kinase C (TrkC) enhances podocyte migration by ERK-mediated WAVE2 activation.

PA01.75. Hidden beauty concepts in ayurveda w.r.t agada tantra

PubMed Central

Kalyanimath, Gurusiddeshwar J.; Sharanesh, T.; Ashwinikumar; Anita, M.

2012-01-01

Purpose: Beauty is not in the face; Beauty is a light in the heart. In our Ayurveda it is stated that Physical, Mental and Spiritual beauty as a combined unit projects the cosmetic sense of Ayurveda (Ch.Su 1/41). According to Ayurveda healthy skin is the result of overall condition of individuals and prescribes numerous skin care treatments that need to be pursued at every stage of life. Ayurveda determines beauty by Prakruti(body constitution), Sara (structural predominance), Samhanana (compactness of body), Twak (skin complexion), Pramana (measurement) and Dirghayu lakshana (symptom of long life). Ayurveda cosmetology started with garbhini paricharya, Dinacharya, Ratricharya and Ritucharya with practice of medicinal herbs and minerals. In day-to-day life, knowingly or unknowingly we exposing lots of chemicals /toxins to our body, those spoiling our natural beauty silently, this same concept is explained in Agada tantra under concept of Dhooshivisha (Su.Ka 2/33) and Garaviasha. Method: 1. Literature review of concept related to cosmetology in relation to Agada Tantra.2. Analysis and Interpretation of mode of action of Agada yoga's in relieving the symptoms of Twak vikaras. Result: 1. Specific Agada yogas like Bilwadi Agada , Dhooshivishari Agada, Moorvadi choorna, Paarantyadi Keram shows best preventive and curative action in twak vikaras.2. Some of the Agadas like Moorvadi choona (A.hrudaya) lepas have enhansess the internal and external beauty. Conclusion: Agada tantra is not only a branch of Ayurveda it deals with management of acute and chronic diseases but also a added benefit of being used for cosmetology.

From toxicological problem to therapeutic use: the discovery of the mode of action of 2-(2-nitro-4-trifluoromethylbenzoyl)-1,3-cyclohexanedione (NTBC), its toxicology and development as a drug.

PubMed

Lock, E A; Ellis, M K; Gaskin, P; Robinson, M; Auton, T R; Provan, W M; Smith, L L; Prisbylla, M P; Mutter, L C; Lee, D L

1998-08-01

NTBC is a triketone with herbicidal activity that has been shown to have a novel mode of action by inhibiting the enzyme 4-hydroxyphenylpyruvate dioxygenase in plants. Early studies on the toxicity of this compound found that rats treated with NTBC developed corneal lesions. Investigations aimed at understanding the mechanistic basis for the ocular toxicity discovered that the rats developed tyrosinaemia and excreted large amounts of 4-hydroxyphenylpyruvate and 4-hydroxyphenyllactate, owing to inhibition of the hepatic enzyme 4-hydroxyphenylpyruvate dioxygenase. The corneal lesions resemble those seen when rats are fed a diet supplemented with tyrosine, leading us to conclude that the ocular toxicity seen with NTBC is a consequence of a marked and sustained tyrosinaemia. Studies in collaboration with Professor Sven Lindstedt showed that NTBC was a potent inhibitor of purified human liver 4-hydroxyphenylpyruvate dioxygenase. This interaction lead to the concept of using NTBC to treat patients with tyrosinaemia type 1, to block or reduce the formation of toxic metabolites such as succinylacetoacetate in the liver. Zeneca Agrochemicals and Zeneca Pharmaceuticals made NTBC available for clinical use and, with the approval of the Swedish Medical Products Agency, a seriously ill child with an acute form of tyrosinaemia type 1 was successfully treated in February 1991. Subsequently, other children with this inborn error of metabolism in Sweden and other countries have been treated with NTBC. The drug is now available to those in need via Swedish Orphan AB.

Polio and Nobel prizes: looking back 50 years.

PubMed

Norrby, Erling; Prusiner, Stanley B

2007-05-01

In 1954, John Enders, Thomas Weller, and Frederick Robbins were awarded the Nobel Prize in Physiology or Medicine "for their discovery of the ability of poliomyelitis viruses to grow in cultures of various types of tissue."5370 This discovery provided for the first time opportunities to produce both inactivated and live polio vaccines. By searching previously sealed Nobel Committee archives, we were able to review the deliberations that led to the award. It appears that Sven Gard, who was Professor of Virus Research at the Karolinska Institute and an adjunct member of the Nobel Committee at the time, played a major role in the events leading to the awarding of the Prize. It appears that Gard persuaded the College of Teachers at the Institute to decide not to follow the recommendation by their Nobel Committee to give the Prize to Vincent du Vigneaud. Another peculiar feature of the 1954 Prize is that Weller and Robbins were included based on only two nominations submitted for the first time that year. In his speech at the Nobel Prize ceremony, Gard mentioned the importance of the discovery for the future production of vaccines, but emphasized the implications of this work for growing many different, medically important viruses. We can only speculate on why later nominations highlighting the contributions of scientists such as Jonas Salk, Hilary Koprowski, and Albert Sabin in the development of poliovirus vaccines have not been recognized by a Nobel Prize.

High Energy Theory Workshops and Visitors at the Michigan Center for Theoretical Physics FY15

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pierce, Aaron T.

The String theory workshop was held from March 4-7, 2015 on the University of Michigan campus. Local organizers were Gordon Kane and Aaron Pierce. Piyush Kumar (Yale), Jim Halverson (KITP), Bobby Acharya (ICTP) and Sven Krippendorf (Oxford) served as external organizers.The meeting focused on the status of work to project 10 or 11 dimensional string/M theories onto our 4 spacetime dimensions (compactification). The workshop had 31 participants, half from outside the U.S. Participants were encouraged to focus on predictions for recent and forthcoming data, particularly for Higgs physics and LHC and dark matter, rather than on the traditional approach ofmore » embedding the Standard Model particles and forces. The Higgs boson sympoosium was locally organized by James Wells (chair), Aaron Pierce and Jianming Qian. Additional input in the early stages by Stefan Pokorski (Warsaw) who was unable to attend in the end. The workshop consistent of 22 talks from experts around the world, both theoretical and experimental. Experimentalists summarized the current state of knowledge of the Higgs boson and its varients. The theory talks ranged from technical calculations of Standard Model processes to speculative novel ideas. The YHET visitor program invited weekly young visitors to the University of Michigan campus to present their work. This year 24 participants came under the program, with 17 of them receiving at least partial support for their visits.« less

Legionella pneumophila transcriptional response following exposure to CuO nanoparticles.

PubMed

Lu, Jingrang; Struewing, Ian; Buse, Helen Y; Kou, Jiahui; Shuman, Howard A; Faucher, Sébastien P; Ashbolt, Nicholas J

2013-04-01

Copper ions are an effective antimicrobial agent used to control Legionnaires' disease and Pontiac fever arising from institutional drinking water systems. Here, we present data on an alternative bactericidal agent, copper oxide nanoparticles (CuO-NPs), and its efficacy on Legionella pneumophila. In broth cultures, the CuO-NPs caused growth inhibition, which appeared to be concentration and exposure time dependent. The transcriptomic response of L. pneumophila to CuO-NP exposure was investigated by using a whole-genome microarray. The expression of genes involved in metabolism, transcription, translation, DNA replication and repair, and unknown/hypothetical proteins was significantly affected by exposure to CuO-NPs. In addition, expression of 21 virulence genes was also affected by exposure to CuO-NP and further evaluated by quantitative reverse transcription-PCR (qRT-PCR). Some virulence gene responses occurred immediately and transiently after addition of CuO-NPs to the cells and faded rapidly (icmV, icmW, lepA), while expression of other genes increased within 6 h (ceg29, legLC8, legP, lem19, lem24, lpg1689, and rtxA), 12 h (cegC1, dotA, enhC, htpX, icmE, pvcA, and sidF), and 24 h (legP, lem19, and ceg19), but for most of the genes tested, expression was reduced after 24 h of exposure. Genes like ceg29 and rtxA appeared to be the most responsive to CuO-NP exposures and along with other genes identified in this study may prove useful to monitor and manage the impact of drinking water disinfection on L. pneumophila.

Role of a ribosomal RNA phosphate oxygen during the EF-G–triggered GTP hydrolysis

PubMed Central

Koch, Miriam; Flür, Sara; Kreutz, Christoph; Ennifar, Eric; Micura, Ronald; Polacek, Norbert

2015-01-01

Elongation factor-catalyzed GTP hydrolysis is a key reaction during the ribosomal elongation cycle. Recent crystal structures of G proteins, such as elongation factor G (EF-G) bound to the ribosome, as well as many biochemical studies, provide evidence that the direct interaction of translational GTPases (trGTPases) with the sarcin-ricin loop (SRL) of ribosomal RNA (rRNA) is pivotal for hydrolysis. However, the precise mechanism remains elusive and is intensively debated. Based on the close proximity of the phosphate oxygen of A2662 of the SRL to the supposedly catalytic histidine of EF-G (His87), we probed this interaction by an atomic mutagenesis approach. We individually replaced either of the two nonbridging phosphate oxygens at A2662 with a methyl group by the introduction of a methylphosphonate instead of the natural phosphate in fully functional, reconstituted bacterial ribosomes. Our major finding was that only one of the two resulting diastereomers, the SP methylphosphonate, was compatible with efficient GTPase activation on EF-G. The same trend was observed for a second trGTPase, namely EF4 (LepA). In addition, we provide evidence that the negative charge of the A2662 phosphate group must be retained for uncompromised activity in GTP hydrolysis. In summary, our data strongly corroborate that the nonbridging proSP phosphate oxygen at the A2662 of the SRL is critically involved in the activation of GTP hydrolysis. A mechanistic scenario is supported in which positioning of the catalytically active, protonated His87 through electrostatic interactions with the A2662 phosphate group and H-bond networks are key features of ribosome-triggered activation of trGTPases. PMID:25941362

The variable routes of rafting: stranding dynamics of floating bull kelp Durvillaea antarctica (Fucales, Phaeophyceae) on beaches in the SE Pacific.

PubMed

López, Boris A; Macaya, Erasmo C; Tala, Fadia; Tellier, Florence; Thiel, Martin

2017-02-01

Dispersal on floating seaweeds depends on availability, viability, and trajectories of the rafts. In the southern hemisphere, the bull kelp Durvillaea antarctica is one of the most common floating seaweeds, but phylogeographic studies had shown low connectivity between populations from continental Chile, which could be due to limitations in local supply and dispersal of floating kelps. To test this hypothesis, the spatiotemporal dynamics of kelp strandings were examined in four biogeographic districts along the Chilean coast (28°-42°S). We determined the biomass and demography of stranded individuals on 33 beaches for three subsequent years (2013, 2014, 2015) to examine whether rafting is restricted to certain districts and seasons (winter or summer). Stranded kelps were found on all beaches. Most kelps had only one stipe (one individual), although we also frequently found coalesced holdfasts with mature males and females, which would facilitate successful rafting dispersal, gamete release, and reproduction upon arrival. High biomasses of stranded kelps occurred in the northern-central (30°S-33°S) and southernmost districts (37°S-42°S), and lower biomasses in the northernmost (28°S-30°S) and southern-central districts (33°S-37°S). The highest percentages and sizes of epibionts (Lepas spp.), indicative of prolonged floating periods, were found on stranded kelps in the northernmost and southernmost districts. Based on these results, we conclude that rafting dispersal can vary regionally, being more common in the northernmost and southernmost districts, depending on intrinsic (seaweed biology) and extrinsic factors (shore morphology and oceanography) that affect local supply of kelps and regional hydrodynamics. © 2016 Phycological Society of America.

Adhesive proteins of stalked and acorn barnacles display homology with low sequence similarities.

PubMed

Jonker, Jaimie-Leigh; Abram, Florence; Pires, Elisabete; Varela Coelho, Ana; Grunwald, Ingo; Power, Anne Marie

2014-01-01

Barnacle adhesion underwater is an important phenomenon to understand for the prevention of biofouling and potential biotechnological innovations, yet so far, identifying what makes barnacle glue proteins 'sticky' has proved elusive. Examination of a broad range of species within the barnacles may be instructive to identify conserved adhesive domains. We add to extensive information from the acorn barnacles (order Sessilia) by providing the first protein analysis of a stalked barnacle adhesive, Lepas anatifera (order Lepadiformes). It was possible to separate the L. anatifera adhesive into at least 10 protein bands using SDS-PAGE. Intense bands were present at approximately 30, 70, 90 and 110 kilodaltons (kDa). Mass spectrometry for protein identification was followed by de novo sequencing which detected 52 peptides of 7-16 amino acids in length. None of the peptides matched published or unpublished transcriptome sequences, but some amino acid sequence similarity was apparent between L. anatifera and closely-related Dosima fascicularis. Antibodies against two acorn barnacle proteins (ab-cp-52k and ab-cp-68k) showed cross-reactivity in the adhesive glands of L. anatifera. We also analysed the similarity of adhesive proteins across several barnacle taxa, including Pollicipes pollicipes (a stalked barnacle in the order Scalpelliformes). Sequence alignment of published expressed sequence tags clearly indicated that P. pollicipes possesses homologues for the 19 kDa and 100 kDa proteins in acorn barnacles. Homology aside, sequence similarity in amino acid and gene sequences tended to decline as taxonomic distance increased, with minimum similarities of 18-26%, depending on the gene. The results indicate that some adhesive proteins (e.g. 100 kDa) are more conserved within barnacles than others (20 kDa).

RNAblueprint: flexible multiple target nucleic acid sequence design.

PubMed

Hammer, Stefan; Tschiatschek, Birgit; Flamm, Christoph; Hofacker, Ivo L; Findeiß, Sven

2017-09-15

Realizing the value of synthetic biology in biotechnology and medicine requires the design of molecules with specialized functions. Due to its close structure to function relationship, and the availability of good structure prediction methods and energy models, RNA is perfectly suited to be synthetically engineered with predefined properties. However, currently available RNA design tools cannot be easily adapted to accommodate new design specifications. Furthermore, complicated sampling and optimization methods are often developed to suit a specific RNA design goal, adding to their inflexibility. We developed a C ++  library implementing a graph coloring approach to stochastically sample sequences compatible with structural and sequence constraints from the typically very large solution space. The approach allows to specify and explore the solution space in a well defined way. Our library also guarantees uniform sampling, which makes optimization runs performant by not only avoiding re-evaluation of already found solutions, but also by raising the probability of finding better solutions for long optimization runs. We show that our software can be combined with any other software package to allow diverse RNA design applications. Scripting interfaces allow the easy adaption of existing code to accommodate new scenarios, making the whole design process very flexible. We implemented example design approaches written in Python to demonstrate these advantages. RNAblueprint , Python implementations and benchmark datasets are available at github: https://github.com/ViennaRNA . s.hammer@univie.ac.at, ivo@tbi.univie.ac.at or sven@tbi.univie.ac.at. Supplementary data are available at Bioinformatics online. © The Author(s) 2017. Published by Oxford University Press.

Comparative assessment of a real-time particle monitor against the reference gravimetric method for PM10 and PM2.5 in indoor air

NASA Astrophysics Data System (ADS)

Tasić, Viša; Jovašević-Stojanović, Milena; Vardoulakis, Sotiris; Milošević, Novica; Kovačević, Renata; Petrović, Jelena

2012-07-01

Accurate monitoring of indoor mass concentrations of particulate matter is very important for health risk assessment as people in developed countries spend approximately 90% of their time indoors. The direct reading, aerosol monitoring device, Turnkey, OSIRIS Particle Monitor (Model 2315) and the European reference low volume sampler, LVS3 (Sven/Leckel LVS3) with size-selective inlets for PM10 and PM2.5 fractions were used to assess the comparability of available optical and gravimetric methods for particulate matter characterization in indoor air. Simultaneous 24-hour samples were collected in an indoor environment for 60 sampling periods in the town of Bor, Serbia. The 24-hour mean PM10 levels from the OSIRIS monitor were well correlated with the LVS3 levels (R2 = 0.87) and did not show statistically significant bias. The 24-hour mean PM2.5 levels from the OSIRIS monitor were moderately correlated with the LVS3 levels (R2 = 0.71), but show statistically significant bias. The results suggest that the OSIRIS monitor provides sufficiently accurate measurements for PM10. The OSIRIS monitor underestimated the indoor PM10 concentrations by approximately 12%, relative to the reference LVS3 sampler. The accuracy of PM10 measurements could be further improved through empirical adjustment. For the fine fraction of particulate matter, PM2.5, it was found that the OSIRIS monitor underestimated indoor concentrations by approximately 63%, relative to the reference LVS3 sampler. This could lead to exposure misclassification in health effects studies relying on PM2.5 measurements collected with this instrument in indoor environments.

The Physics and Applications of High Brightness Beams: Working Group C Summary on Applications to FELS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nuhn, Heinz-Dieter

2003-03-19

This is the summary of the activities in working group C, ''Application to FELs,'' which was based in the Bithia room at the Joint ICFA Advanced Accelerator and Beam Dynamics Workshop on July 1-6, 2002 in Chia Laguna, Sardinia, Italy. Working group C was small in relation to the other working groups at that workshop. Attendees include Enrica Chiadroni, University of Rome ape with an identical pulse length. ''La Sapienza'', Luca Giannessi, ENEA, Steve Lidia, LBNL, Vladimir Litvinenko, Duke University, Patrick Muggli, UCLA, Alex Murokh, UCLA, Heinz-Dieter Nuhn, SLAC, Sven Reiche, UCLA, Jamie Rosenzweig, UCLA, Claudio Pellegrini, UCLA, Susan Smith,more » Daresbury Laboratory, Matthew Thompson, UCLA, Alexander Varfolomeev, Russian Research Center, plus a small number of occasional visitors. The working group addressed a total of nine topics. Each topic was introduced by a presentation, which initiated a discussion of the topic during and after the presentation. The speaker of the introductory presentation facilitated the discussion. There were six topics that were treated in stand-alone sessions of working group C. In addition, there were two joint sessions, one with working group B, which included one topic, and one with working group C, which included two topics. The presentations that were given in the joint sessions are summarized in the working group summary reports for groups B and D, respectively. This summary will only discuss the topics that were addressed in the stand-alone sessions, including Start-To-End Simulations, SASE Experiment, PERSEO, ''Optics Free'' FEL Oscillators, and VISA II.« less

Adhesive Proteins of Stalked and Acorn Barnacles Display Homology with Low Sequence Similarities

PubMed Central

Jonker, Jaimie-Leigh; Abram, Florence; Pires, Elisabete; Varela Coelho, Ana; Grunwald, Ingo; Power, Anne Marie

2014-01-01

Barnacle adhesion underwater is an important phenomenon to understand for the prevention of biofouling and potential biotechnological innovations, yet so far, identifying what makes barnacle glue proteins ‘sticky’ has proved elusive. Examination of a broad range of species within the barnacles may be instructive to identify conserved adhesive domains. We add to extensive information from the acorn barnacles (order Sessilia) by providing the first protein analysis of a stalked barnacle adhesive, Lepas anatifera (order Lepadiformes). It was possible to separate the L. anatifera adhesive into at least 10 protein bands using SDS-PAGE. Intense bands were present at approximately 30, 70, 90 and 110 kilodaltons (kDa). Mass spectrometry for protein identification was followed by de novo sequencing which detected 52 peptides of 7–16 amino acids in length. None of the peptides matched published or unpublished transcriptome sequences, but some amino acid sequence similarity was apparent between L. anatifera and closely-related Dosima fascicularis. Antibodies against two acorn barnacle proteins (ab-cp-52k and ab-cp-68k) showed cross-reactivity in the adhesive glands of L. anatifera. We also analysed the similarity of adhesive proteins across several barnacle taxa, including Pollicipes pollicipes (a stalked barnacle in the order Scalpelliformes). Sequence alignment of published expressed sequence tags clearly indicated that P. pollicipes possesses homologues for the 19 kDa and 100 kDa proteins in acorn barnacles. Homology aside, sequence similarity in amino acid and gene sequences tended to decline as taxonomic distance increased, with minimum similarities of 18–26%, depending on the gene. The results indicate that some adhesive proteins (e.g. 100 kDa) are more conserved within barnacles than others (20 kDa). PMID:25295513

Diversity and evolution of Lactobacillus casei group isolated from fermented dairy products in Tibet.

PubMed

Feng, Jing; Jiang, Yujun; Li, Mingyu; Zhao, Siyu; Zhang, Yanming; Li, Xuesong; Wang, Hui; Lin, Guangen; Wang, Hao; Li, Tiejing; Man, Chaoxin

2018-05-25

Bacteria in Lactobacillus casei group, including Lactobacillus casei (L. casei), Lactobacillus paracasei (L. paracasei), and Lactobacillus rhamnosus (L. rhamnosus) are important lactic acid bacteria in the production of fermented dairy products and are faced with the controversial nomenclatural status due to their close phylogenetic similarity. To probe the evolution and phylogeny of L. casei group, 100 isolates of lactic acid bacteria originated from naturally fermented dairy products in Tibet of China were subjected to multilocus sequence typing (MLST). The MLST scheme, based on analysis of the housekeeping genes fusA, ileS, lepA, leuS, pyrG, recA and recG, revealed that all the isolates belonged to a group containing the L. paracasei reference strains and were clearly different from the strains of L. casei and L. rhamnosus. Although nucleotide diversity (π) was low for the seven genes (ranging from 0.00341 for fusA to 0.01307 for recG), high genetic diversity represented by 83 sequence types (STs) with a discriminatory index of 0.98 was detected. A network-like structure based on split decomposition analysis, and the high values of the relative effect of recombination and mutation in the diversification of the lineages (r/m = 4.76) and the relative frequency of occurrence of recombination and mutation (ρ/θ = 2.62) indicated that intra-species recombination occurred frequently and homologous recombination played a key role in generating genotypic diversity amongst L. paracasei strains in Tibet. The discovery of 51 new STs and the results of STRUCTURE analysis suggested that the L. casei group in Tibet had an individual and particular population structure in comparison to European isolates. Overall, this research might be the first report about genetic diversity and population structure of Lactobacillus populations isolated from naturally fermented dairy products in Tibet based on MLST scheme.

Brood Ball-Mediated Transmission of Microbiome Members in the Dung Beetle, Onthophagus taurus (Coleoptera: Scarabaeidae)

PubMed Central

Estes, Anne M.; Hearn, David J.; Snell-Rood, Emilie C.; Feindler, Michele; Feeser, Karla; Abebe, Tselotie

2013-01-01

Insects feeding on plant sap, blood, and other nutritionally incomplete diets are typically associated with mutualistic bacteria that supplement missing nutrients. Herbivorous mammal dung contains more than 86% cellulose and lacks amino acids essential for insect development and reproduction. Yet one of the most ecologically necessary and evolutionarily successful groups of beetles, the dung beetles (Scarabaeinae) feeds primarily, or exclusively, on dung. These associations suggest that dung beetles may benefit from mutualistic bacteria that provide nutrients missing from dung. The nesting behaviors of the female parent and the feeding behaviors of the larvae suggest that a microbiome could be vertically transmitted from the parental female to her offspring through the brood ball. Using sterile rearing and a combination of molecular and culture-based techniques, we examine transmission of the microbiome in the bull-headed dung beetle, Onthophagus taurus. Beetles were reared on autoclaved dung and the microbiome was characterized across development. A ~1425 bp region of the 16S rRNA identified Pseudomonadaceae, Enterobacteriaceae, and Comamonadaceae as the most common bacterial families across all life stages and populations, including cultured isolates from the 3rd instar digestive system. Finer level phylotyping analyses based on lepA and gyrB amplicons of cultured isolates placed the isolates closest to Enterobacter cloacae, Providencia stuartii, Pusillimonas sp., Pedobacter heparinus, and Lysinibacillus sphaericus. Scanning electron micrographs of brood balls constructed from sterile dung reveals secretions and microbes only in the chamber the female prepares for the egg. The use of autoclaved dung for rearing, the presence of microbes in the brood ball and offspring, and identical 16S rRNA sequences in both parent and offspring suggests that the O. taurus female parent transmits specific microbiome members to her offspring through the brood chamber. The

Correction to Mikolon, Kreiner, and Wieseke (2015).

PubMed

2016-05-01

Reports an error in "Seeing You Seeing Me: Stereotypes and the Stigma Magnification Effect" by Sven Mikolon, Glen E. Kreiner and Jan Wieseke (Journal of Applied Psychology, Advanced Online Publication, Dec 14, 2015, np). In the article, Table 2 contained a production-related formatting error. Values from column 11 onward were shifted upwards in the table. All versions of this article have been corrected. (The following abstract of the original article appeared in record 2015-56319-001.) Despite an increased interest in the phenomenon of stigma in organizations, we know very little about the interactions between those who are stigmatized and those who stigmatize them. Integrating both the perceptions of the stigmatized worker and the stigmatizing customer into one model, the present study addresses this gap. It examines the role of stereotypes held by customers of stigmatized organizations and metastereotypes held by the stigmatized workers themselves (i.e., their shared beliefs of the stereotypes customers associate with them) in frontline exchanges. To do so, data regarding frontline workers (vendors) of homeless-advocate newspapers from 3 different sources (vendors, customers, trained observers) were gathered. Multilevel path-analytic hypotheses tests reveal (a) how frontline workers' prototypicality for a stigmatized organization renders salient a stigma within frontline interactions and (b) how stereotypes by customers and metastereotypes by frontline workers interact with each other in such contacts. The results support a hypothesized interaction between frontline workers' metastereotypes and customers' stereotypes-what we call the "stigma magnification effect". The study also derives important practical implications by linking stigma to frontline workers' discretionary financial gains. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

Expanding the Use of Online Remote Electron Microscopy in the Classroom to Transform Undergraduate Geoscience Education: Successes and Strategies for Increasing Student and Faculty Engagement

NASA Astrophysics Data System (ADS)

Hickey-Vargas, R.; Holbik, S. P.; Ryan, J. G.; MacDonald, J. H., Jr.; Beck, M.

2015-12-01

Geoscience faculty at the University of South Florida (USF), Florida Gulf Coast University (FCGU), Valencia College (VC) and Florida International University (FIU) have teamed to construct, test and disseminate geoscience curricula in which microbeam analytical instruments are operated by undergraduates, with data gathered in the classroom in real-time over the internet. Activities have been developed for courses Physical Geology, Oceanography, Earth Materials, Mineralogy/Petrology and Stratigraphy using the Scanning Electron Microscope (SEM) and Electron Probe Microanalyzer (EPMA) housed in the Florida Center for Analytical Electron Microscopy (FCAEM; https://fcaem.fiu.edu) at FIU. Students and faculty send research materials such as polished rock sections and microfossil mounts to FCAEM to be examined during their scheduled class and lab periods. Student control of both decision-making and selection of analytical targets is encouraged. The objective of these activities is to move students from passive learning to active, self-directed inquiry at an early stage in their undergraduate career, while providing access to advanced instruments that are not available at USF, FGCU and VC. These strategies strongly facilitate student interest in undergraduate research making use of these instruments and one positive outcome to date is an increased number of students undertaking independent research projects. Prior research by USF PI Jeff Ryan indicated that various barriers related to instrument access and use hindered interested geoscience faculty in making use of these tools and strategies. In the current project, post-doctoral researcher Dr. Sven Holbik acts as a facilitator, working directly with faculty from other institutions one-on-one to provide initial training and support, including on-site visits to field check classroom technology when needed. Several new educators and institutions will initiate classroom activities using FCAEM instrumentation this Fall.

PREFACE: Algebra, Geometry, and Mathematical Physics 2010

NASA Astrophysics Data System (ADS)

Stolin, A.; Abramov, V.; Fuchs, J.; Paal, E.; Shestopalov, Y.; Silvestrov, S.

2012-02-01

This proceedings volume presents results obtained by the participants of the 6th Baltic-Nordic workshop 'Algebra, Geometry, and Mathematical Physics (AGMP-6)' held at the Sven Lovén Centre for Marine Sciences in Tjärnö, Sweden on October 25-30, 2010. The Baltic-Nordic Network AGMP 'Algebra, Geometry, and Mathematical Physics' http://www.agmp.eu was created in 2005 on the initiative of two Estonian universities and two Swedish universities: Tallinn University of Technology represented by Eugen Paal (coordinator of the network), Tartu University represented by Viktor Abramov, Lund University represented by Sergei Silvestrov, and Chalmers University of Technology and the University of Gothenburg represented by Alexander Stolin. The goal was to promote international and interdisciplinary cooperation between scientists and research groups in the countries of the Baltic-Nordic region in mathematics and mathematical physics, with special emphasis on the important role played by algebra and geometry in modern physics, engineering and technologies. The main activities of the AGMP network consist of a series of regular annual international workshops, conferences and research schools. The AGMP network also constitutes an important educational forum for scientific exchange and dissimilation of research results for PhD students and Postdocs. The network has expanded since its creation, and nowadays its activities extend beyond countries in the Baltic-Nordic region to universities in other European countries and participants from elsewhere in the world. As one of the important research-dissimilation outcomes of its activities, the network has a tradition of producing high-quality research proceedings volumes after network events, publishing them with various international publishers. The PDF also contains the following: List of AGMP workshops and other AGMP activities Main topics discussed at AGMP-6 Review of AGMP-6 proceedings Acknowledgments List of Conference Participants

An Introduction to Human Resource Development in Taiwan, R.O.C. = Jong Hwa Min Gwo Ren Li Tz Yuan Fa Jaan Jyan Jieh.

ERIC Educational Resources Information Center

Lee, Lung-Sheng; Chen, Ya-Yan

In Taiwan, human resource development (HRD) is defined as the systematic education, training, and development employers provide for their employees as well as organizational development for corporations. A history of HRD development indicates that in the 1960s, the government began to implement planning measures for HRD in business and industry;…

Vygotsky's Fragile Genius in Time and Place: Essay Review of "Understanding Vygotsky: A Quest for Synthesis" by Rene van der Veer and Jaan Valsiner.

ERIC Educational Resources Information Center

Youniss, James

1994-01-01

Briefly summarizes Vygotsky's life, the appeal and subsequent abandonment of his ideas in the 1960s, and renewal of interest in the 1970s and 1980s (often at the expense of Piaget). Praises van der Veer and Valsinger's book as a realistic picture of Vygotsky's background, life, and work, of the scientific and political context in Russia and of his…

PREFACE: Beyond Kyoto - the necessary road

NASA Astrophysics Data System (ADS)

Margrethe Basse, Ellen

2009-03-01

The Beyond Kyoto conference in Aarhus March 2009 was organised in collaboration with other knowledge institutions, businesses and authorities. It brought together leading scientists, policy-makers, authorities, intergovernmental organisations, NGO's, business stakeholders and business organisations. The conference was a joint interdisciplinary project involving many academic areas and disciplines. These conference proceedings are organised in central and recurring themes that cut across many debates on climate change, the climatic challenges as well as the solutions. In the front there is a short presentation of the conference concept. Part I of the proceedings focuses on issues related to the society - covering climate policy, law, market based instruments, financial structure, behaviour and consumption, public participation, media communication and response from indigenous peoples etc. Part II of the proceedings concerns the scientific knowledge base on climate related issues - covering climate change processes per se, the potential impacts of projected climate change on biodiversity and adaptation possibilities, the interplay between climate, agriculture and biodiversity, emissions, agricultural systems, increasing pressure on the functioning of agriculture and natural areas, vulnerability to extreme weather events and risks in respect to sea-level rise etc. The conference proceedings committee consists of four professors from Aarhus University: Jens-Christian Svenning, Jørgen E Olesen, Mads Forchhammer and Ellen Margrethe Basse. Aarhus University's Climate Secretariat has had the overall responsibility for coordinating the many presentations, as well as the practical side of arranging the conference and supporting the publication of papers. As Head of the Climate Secretariat and Chair of Aarhus University's Climate Panel, I would like to thank everyone for their contribution. This applies both to the scientific and the practical efforts. Special thanks to

Balloon Angioplasty – The Legacy of Andreas Grüntzig, M.D. (1939–1985)

PubMed Central

Barton, Matthias; Grüntzig, Johannes; Husmann, Marc; Rösch, Josef

2014-01-01

In 1974, at the Medical Policlinic of the University of Zürich, German-born physician-scientist Andreas Grüntzig (1939–1985) for the first time applied a balloon-tipped catheter to re-open a severely stenosed femoral artery, a procedure, which he initially called “percutaneous transluminal dilatation”. Balloon angioplasty as a therapy of atherosclerotic vascular disease, for which Grüntzig and Charles T. Dotter (1920–1985) received a nomination for the Nobel Prize in Physiology or Medicine in 1978, became one of the most successful examples of translational medicine in the twentieth century. Known today as percutaneous transluminal angioplasty (PTA) in peripheral arteries or percutaneous transluminal coronary angioplasty (PTCA) or percutaneous coronary intervention (PCI) in coronary arteries, balloon angioplasty has become the method of choice to treat patients with acute myocardial infarction or occluded leg arteries. On the occasion of the 40th anniversary of balloon angioplasty, we summarize Grüntzig’s life and career in Germany, Switzerland, and the United States and also review the developments in vascular medicine from the 1890s to the 1980s, including Dotter’s first accidental angioplasty in 1963. The work of pioneers of catheterization, including Pedro L. Fariñas in Cuba, André F. Cournand in France, Werner Forssmann, Werner Porstmann and Eberhard Zeitler in Germany, António Egas Moniz and Reynaldo dos Santos in Portugal, Sven-Ivar Seldinger in Sweden, and Barney Brooks, Thomas J. Fogarty, Melvin P. Judkins, Richard K. Myler, Dickinson W. Richards, and F. Mason Sones in the United States, is discussed. We also present quotes by Grüntzig and excerpts from his unfinished autobiography, statements of Grüntzig’s former colleagues and contemporary witnesses, and have included hitherto unpublished historic photographs and links to archive recordings and historic materials. This year, on June 25, 2014, Andreas Grüntzig would have celebrated

Lanthanum Affects Bell Pepper Seedling Quality Depending on the Genotype and Time of Exposure by Differentially Modifying Plant Height, Stem Diameter and Concentrations of Chlorophylls, Sugars, Amino Acids, and Proteins.

PubMed

García-Jiménez, Atonaltzin; Gómez-Merino, Fernando C; Tejeda-Sartorius, Olga; Trejo-Téllez, Libia I

2017-01-01

Lanthanum (La) is considered a beneficial element, capable of inducing hormesis. Hormesis is a dose-response relationship phenomenon characterized by low-dose stimulation and high-dose inhibition. Herein we tested the effect of 0 and 10 μM La on growth and biomolecule concentrations of seedlings of four sweet bell pepper ( Capsicum annuum L.) varieties, namely Sven, Sympathy, Yolo Wonder, and Zidenka. Seedling evaluations were performed 15 and 30 days after treatment applications (dat) under hydroponic greenhouse conditions. Seedling height was significantly increased by La, growing 20% taller in Yolo Wonder plants, in comparison to the control. Similarly, La significantly enhanced shoot diameter, with increases of 9 and 9.8% in measurements performed 15 and 30 dat, respectively, as compared to the control. Likewise, La-treated seedlings had a higher number of flower buds than the control. An increase in the number of leaves because of La application was observed in Yolo Wonder seedlings, both 15 and 30 dat, while leaf area was augmented in this variety only 30 dat. Nevertheless, La did not affect dry biomass accumulation. La effects on biomolecule concentration were differential over time. In all varieties, La stimulated the biosynthesis of chlorophyll a, b and total 15 dat, though 30 dat only the varieties Sympathy and Yolo Wonder showed enhanced concentrations of these molecules because of La. Total soluble sugars increased in La-treated seedlings 30 dat. Interestingly, while most varieties exposed to La showed a reduction in amino acid concentration 15 dat, the opposite trend was observed 30 dat. Importantly, in all varieties evaluated, La stimulated soluble protein concentration 30 dat. It is important to note that while chlorophyll concentrations increased in all varieties exposed to La, both 15 and 30 dat, those of soluble sugars and proteins consistently increased only 30 dat, but not 15 dat. Our results confirm that La may improve seedling quality by

[Brief history of interventional radiology].

PubMed

Tang, Zhenliang; Jia, Aiqin; Li, Luoyun; Li, Chunyu

2014-05-01

In 1923, angiography was first successively used for the human body. In 1953, a Swedish doctor Sven-Ivar Seldinger pioneered the Seldinger technique, which laid down the foundation of interventional radiology. In 1963, Charles Dotter first proposed the idea of interventional radiology. In 1964, Charles Dotter opened a new era of percutaneous angioplasty through accidental operation, marking the formation of interventional radiology. On this basis, the techniques of balloon catheter dilation and metal stent implantation was developed. Endovascular stent was proposed in 1969. In 1973, the percutaneous angioplasty has been a breakthrough with the emergence of soft double-lumen balloon catheter. Percutaneous coronary angioplasty is applied in 1977. Since the 1990s, balloon angioplasty relegated to secondary status with the emergence of metal stent. Currently, endovascular stent have entered a new stage with the emergence of temporary stent and stent grafts and biological stent. Transcatheter arterial embolization had been one of the most important basic techniques for interventional radiology since 1965, it had also been a corresponding development with the improvement of embolic agents and catheter technology for the treatment of diseases now. Transjugular intrahepatic portosystemic stent-shunt is a comprehensive interventional radiology technology since 1967, in which the biliary system can be reached through a jugular vein, and the improvement appeared with balloon expandable stent in 1986.Since 1972, non-vascular interventional techniques was another important branch of interventional radiology. Currently, it is applied in the diagnosis and treatment of many diseases of the internal organs like the pancreas, liver, kidney, spinal cord, Fallopian tubes, esophagus and other organs. In 1973, Chinese radiologist first conducted the angiography test. Interventional radiology was introduced into China in the 1980s, it was readily developed through the sponsoring of

New approaches in the indirect quantification of thermal rock properties in sedimentary basins: the well-log perspective

NASA Astrophysics Data System (ADS)

Fuchs, Sven; Balling, Niels; Förster, Andrea

2016-04-01

error of <3°C along a 4 km deep profile. A benchmark comparison for thermal diffusivity and specific heat capacity is pending. Fuchs, Sven; Balling, Niels; Förster, Andrea (2015): Calculation of thermal conductivity, thermal diffusivity and specific heat capacity of sedimentary rocks using petrophysical well logs, Geophysical Journal International 203, 1977-2000, doi: 10.1093/gji/ggv403

The Use of Digital and Remote Communication Technologies as a Tool for Multiple Sclerosis Management: Narrative Review.

PubMed

Marziniak, Martin; Brichetto, Giampaolo; Feys, Peter; Meyding-Lamadé, Uta; Vernon, Karen; Meuth, Sven G

2018-04-24

education. We review each solution, focusing on any clinical evidence supporting their use from prospective trials (including ASSESS MS, Deprexis, MSdialog, and the Multiple Sclerosis Performance Test) and consider the opportunities, barriers to adoption, and potential pitfalls of eHealth technologies in routine health care. ©Martin Marziniak, Giampaolo Brichetto, Peter Feys, Uta Meyding-Lamadé, Karen Vernon, Sven G. Meuth. Originally published in JMIR Rehabilitation and Assistive Technology (http://rehab.jmir.org), 24.04.2018.

Analysis of the Type IV Fimbrial-Subunit Gene fimA of Xanthomonas hyacinthi: Application in PCR-Mediated Detection of Yellow Disease in Hyacinths

PubMed Central

van Doorn, J.; Hollinger, T. C.; Oudega, B.

2001-01-01

A sensitive and specific detection method was developed for Xanthomonas hyacinthi; this method was based on amplification of a subsequence of the type IV fimbrial-subunit gene fimA from strain S148. The fimA gene was amplified by PCR with degenerate DNA primers designed by using the N-terminal and C-terminal amino acid sequences of trypsin fragments of FimA. The nucleotide sequence of fimA was determined and compared with the nucleotide sequences coding for the fimbrial subunits in other type IV fimbria-producing bacteria, such as Xanthomonas campestris pv. vesicatoria, Neisseria gonorrhoeae, and Moraxella bovis. In a PCR internal primers JAAN and JARA, designed by using the nucleotide sequences of the variable central and C-terminal region of fimA, amplified a 226-bp DNA fragment in all X. hyacinthi isolates. This PCR was shown to be pathovar specific, as assessed by testing 71 Xanthomonas pathovars and bacterial isolates belonging to other genera, such as Erwinia and Pseudomonas. Southern hybridization experiments performed with the labelled 226-bp DNA amplicon as a probe suggested that there is only one structural type IV fimbrial-gene cluster in X. hyacinthi. Only two Xanthomonas translucens pathovars cross-reacted weakly in PCR. Primers amplifying a subsequence of the fimA gene of X. campestris pv. vesicatoria (T. Ojanen-Reuhs, N. Kalkkinen, B. Westerlund-Wikström, J. van Doorn, K. Haahtela, E.-L. Nurmiaho-Lassila, K. Wengelink, U. Bonas, and T. K. Korhonen, J. Bacteriol. 179: 1280–1290, 1997) were shown to be pathovar specific, indicating that the fimbrial-subunit sequences are more generally applicable in xanthomonads for detection purposes. Under laboratory conditions, approximately 1,000 CFU of X. hyacinthi per ml could be detected. In inoculated leaves of hyacinths the threshold was 5,000 CFU/ml. The results indicated that infected hyacinths with early symptoms could be successfully screened for X. hyacinthi with PCR. PMID:11157222

Novel (p)ppGpp Binding and Metabolizing Proteins of Escherichia coli.

PubMed

Zhang, Yong; Zborníková, Eva; Rejman, Dominik; Gerdes, Kenn

2018-03-06

The alarmone (p)ppGpp plays pivotal roles in basic bacterial stress responses by increasing tolerance of various nutritional limitations and chemical insults, including antibiotics. Despite intensive studies since (p)ppGpp was discovered over 4 decades ago, (p)ppGpp binding proteins have not been systematically identified in Escherichia coli We applied DRaCALA ( d ifferential ra dial c apillary a ction of l igand a ssay) to identify (p)ppGpp-protein interactions. We discovered 12 new (p)ppGpp targets in E. coli that, based on their physiological functions, could be classified into four major groups, involved in (i) purine nucleotide homeostasis (YgdH), (ii) ribosome biogenesis and translation (RsgA, Era, HflX, and LepA), (iii) maturation of dehydrogenases (HypB), and (iv) metabolism of (p)ppGpp (MutT, NudG, TrmE, NadR, PhoA, and UshA). We present a comprehensive and comparative biochemical and physiological characterization of these novel (p)ppGpp targets together with a comparative analysis of relevant, known (p)ppGpp binding proteins. Via this, primary targets of (p)ppGpp in E. coli are identified. The GTP salvage biosynthesis pathway and ribosome biogenesis and translation are confirmed as targets of (p)ppGpp that are highly conserved between E. coli and Firmicutes In addition, an alternative (p)ppGpp degradative pathway, involving NudG and MutT, was uncovered. This report thus significantly expands the known cohort of (p)ppGpp targets in E. coli IMPORTANCE Antibiotic resistance and tolerance exhibited by pathogenic bacteria have resulted in a global public health crisis. Remarkably, almost all bacterial pathogens require the alarmone (p)ppGpp to be virulent. Thus, (p)ppGpp not only induces tolerance of nutritional limitations and chemical insults, including antibiotics, but is also often required for induction of virulence genes. However, understanding of the molecular targets of (p)ppGpp and the mechanisms by which (p)ppGpp influences bacterial physiology

A Skin Cancer Prevention Facial-Aging Mobile App for Secondary Schools in Brazil: Appearance-Focused Interventional Study.

PubMed

Brinker, Titus Josef; Heckl, Marlene; Gatzka, Martina; Heppt, Markus V; Resende Rodrigues, Henrique; Schneider, Sven; Sondermann, Wiebke; de Almeida E Silva, Carolina; Kirchberger, Michael C; Klode, Joachim; Enk, Alexander H; Knispel, Sarah; von Kalle, Christof; Stoffels, Ingo; Schadendorf, Dirk; Nakamura, Yasuhiro; Esser, Stefan; Assis, Aisllan; Bernardes-Souza, Breno

2018-03-09

, 87.2% agreement in males) and increased use of sun protection (n=197, 92.1% agreement in females vs n=123, 87.2% agreement in males) and independent of age or skin type. All medical students involved filled in a process evaluation revealing that they all perceived the intervention as effective and unproblematic, and that all pupils tried the app in their presence. The photoaging intervention was effective in changing behavioral predictors for UV protection in Brazilian adolescents. The predictors measured indicated an even higher prospective effectiveness in southeast Brazil than in Germany (>90% agreement in Brazil vs >60% agreement in Germany to both items that measured motivation to reduce UV exposure) in accordance with the theory of planned behavior. Medical students are capable of complete implementation. A randomized controlled trial measuring prospective effects in Brazil is planned as a result of this study. ©Titus Josef Brinker, Marlene Heckl, Martina Gatzka, Markus V Heppt, Henrique Resende Rodrigues, Sven Schneider, Wiebke Sondermann, Carolina de Almeida e Silva, Michael C Kirchberger, Joachim Klode, Alexander H Enk, Sarah Knispel, Christof von Kalle, Ingo Stoffels, Dirk Schadendorf, Yasuhiro Nakamura, Stefan Esser, Aisllan Assis, Breno Bernardes-Souza. Originally published in JMIR Mhealth and Uhealth (http://mhealth.jmir.org), 09.03.2018.

The member of the Academy H.P. Keres and the Relativity theory in Estonia

NASA Astrophysics Data System (ADS)

Kuusk, P.; Muursepp, P. V.; Piir, Ivar

1987-10-01

The first popular lecture on the Einstein theory of relativity was given in Estonia already in 1914 by Jaan Sarv (1877-1954)[1],afterwards a professor of mathematics at the Tartu University. The first student courses on special relativity were delivered by Professor of Mathematics Juri Nuut (1892-1952): non-Euclidean geometry (1930), the mathematical theory of relativity (1932/1933),the Lorenz transformations (1937). His own research work concerned the Lobachevsky geometry [7] and its application to cosmology [6]. Harald Keres qraguated from the Tartu University in 1936. He gave the first student course on general relativity (based on books [11-14]in 1940.In 1942,he got the dr.phil.nat degree form the Tartu University for his theses "Raum und Zeit in der allgemeinen Relativitatstheorie". The degree of the doctor of mathematical and physical sciences was confirmed by VAK (the All-Union Higher Attestation Commission) in 1949.In this period, he got aquainted with the leading Soviet scientists working on General Relativity, prof.V.A.Fock,Prof.D.D.Ivanenko,Prof.A.Z.Petrov,and Prof.M.F.Shirokov. After World War two all-union university courses were introduced in Tartu State University. According to the curriculum of the course the special theory of relativity is a part of electrodynamics obligatory for all students of the department of Physics. From 1947 till 1985 this course was delivered by Prof.PaulKard(1914-1985).He also published a number of text-books on the subject [15-19]. The general theory of relativity was read by Prof.H.Keres in 1951-1960 and later by his pupils R.Lias and A.Koppel [20-23] as a special course for students specializing in theoretical Physics. The first PHD-s in general relativity were made by R.Lias [27](1954) and I.Piir [28] (1955). In 1961, Prof.H.Keres was elected a member of the Academy of Sciences of the Estonian S.S.R. He left the TArtu State University and began to work in the Institute of Physics as the head of the Department of

PREFACE: Eclipse on the Coral Sea: Cycle 24 Ascending

NASA Astrophysics Data System (ADS)

Cally, Paul; Erdélyi, Robert; Norton

2013-06-01

Cycle 24 thus far from Sarbani Basu. Other invited papers presented here include an appreciation of Hinode's view of solar activity as the cycle rises by Toshifumi Shimizu; a first taxonomy of magnetic tornadoes and chromospheric swirls by Sven Wedemeyer {\\it et al}; an analysis of Hinode/EIS observations of transient heating events; a timely re-examination of solar dynamo theory by Paul Charbonneau; an exciting teaser for the solar potential of the Murchison Widefield Array now operating in Western Australia by Steven Tingay {\\it et al}; an overview and critique of the state of nonlinear force-free magnetic field extrapolation theory and practice by Mike Wheatland and Stuart Gilchrist; and a masterful review of atmospheric MHD wave coupling to the Sun's internal p-mode oscillations by Elena Khomenko and Irantzu Calvo Santamaria. The many contributed papers published here are no less exciting. All papers have been refereed to a high standard. The editors thank all the referees, drawn both from conference attendees and the wider community, who have taken their tasks very seriously and provided very detailed and helpful reports. Nearly all contributions have been substantially improved by the process. We must also thank our financial sponsors. Both the Global Oscillations Network Group (GONG) and LWS/SDO were generous in their support, as were the School of Mathematical Sciences and the Monash Centre for Astrophysics (MoCA) at Monash University, Melbourne, and the Centre for Astronomy at James Cook University, Townsville. The Local Organizing Committee and the many students who assisted before and during the conference also deserve high praise for facilitating such a memorable meeting. Paul Cally, Robert Erdélyi and Aimee Norton Conference photograph

PREFACE: 7th International Conference on 3D Radiation Dosimetry (IC3DDose)

NASA Astrophysics Data System (ADS)

Thwaites, David; Baldock, Clive

2013-06-01

radiation therapy treatment through improved clinical dosimetry to investigate and understand the dosimetric challenges of modern radiation treatments to provide a forum to discuss the latest research and developments in 3D and advanced radiation dosimetry to energise and diversify dosimetry research and clinical practice by encouraging interaction and synergy between advanced, 3D and semi-3D dosimetry techniques We believe the conference program, with its excellent range of expert and specialist speakers, met these objectives. Thanks are due to all invited speakers for their participation, to the Local Organising Committee members for all their hard work in making the conference happen, particularly the small core administrative support group, and to the range of academic, organisation and commercial sponsors who generously supported the meeting. The Scientific Committee members are also thanked for reviewing the submitted manuscripts and for assisting in the editorial process. Finally, all who travelled to Sydney, Australia for the meeting are acknowledged for choosing to attend and contribute to making this a successful conference. Local Conference Organising Committee David Thwaites (Conference Convener) Clive Baldock Leanne Price Elizabeth Starkey May Whitaker Peter Greer Lois Holloway Phil Vial Robin Hill Conference Scientific Committee Sven Back (Sweden) Clive Baldock (Australia) Cheng-Shie Wuu (USA) Yves de Deene (Belgium) Simon Doran (UK) Geoffrey Ibbott (USA) Andrew Jirasek (Canada) Kevin Jordan (Canada) Martin Lepage (Canada) Mark Oldham (USA) Evangelos Pappas (Greece) John Schreiner (Canada) David Thwaites (Australia) David ThwaitesClive Baldock DirectorExecutive Dean Institute of Medical PhysicsFaculty of Science School of PhysicsMacquarie University University of SydneyNorth Ryde NSW 2006NSW 2109 AustraliaAustralia The PDF also contains the conference program.

EDITORIAL: Message from the Editor Message from the Editor

NASA Astrophysics Data System (ADS)

Thomas, Paul

2011-01-01

Index. The journal depends entirely on its authors and referees and so I would like to thank them all for their work in 2010 and look forward to a continuing, successful collaboration in 2011. Refereeing The Nuclear Fusion editorial office understands how much effort is required of our referees. The Editorial Board decided that an expression of thanks to our most loyal referees is appropriate and so, since January 2005, we have been offering the top ten most active referees over the past year a personal subscription to Nuclear Fusion with electronic access for one year, free of charge. This year, two of the top referees have reviewed four or more manuscripts in the period November 2009 to November 2010 and provided particularly detailed advice to the authors. We have excluded our Board Members, Guest Editors of special editions and those referees who were already listed in the last four years. Guest Editors' work on papers submitted to their special issues is also excluded from consideration. The following people have been selected: Osamu Naito, Japan Atomic Energy Agency, Naka, Japan Masahiro Kobayashi, National Institute for Fusion Science, Toki, Japan Duccio Testa, Lausanne Federal Polytechnic University, Switzerland Vladimir Pustovitov, Russian Research Centre, Kurchatov Insitute, Russia Christopher Holland, University of California at San Diego, USA Yuri Gribov, ITER International Organisation, Cadarache, France Eriko Jotaki, Kyushu University, Japan Sven Wiesen, Jülich Research Centre, Germany Viktor S. Marchenko, Ukraine National Academy of Sciences, Ukraine Richard Stephens, General Atomics, USA In addition, there is a group of several hundred referees who have helped us in the past year to maintain the high scientific standard of Nuclear Fusion. At the end of this issue we give the full list of all referees for 2010. Our thanks to them! Authors The winner of the 2010 Nuclear Fusion Award was J.E. Rice et al for the paper entitled 'Inter-machine comparison of

EDITORIAL: Strongly correlated electron systems Strongly correlated electron systems

NASA Astrophysics Data System (ADS)

Ronning, Filip; Batista, Cristian

2011-03-01

-dependent Zeeman splitting in strontium ruthenate Emil J Rozbicki, James F Annett, Jean-René Souquet and Andrew P Mackenzie Thermodynamics of itinerant metamagnetic transitions A M Berridge Magnon-mediated pairing and isotope effect in iron-based superconductors Jiansheng Wu and Philip Phillips Nernst quantum oscillations in bulk semi-metals Zengwei Zhu, Huan Yang, Aritra Banerjee, Liam Malone, Benoît Fauqué and Kamran Behnia Signatures of a quantum Griffiths phase in a d-metal alloy close to its ferromagnetic quantum critical point Almut Schroeder, Sara Ubaid-Kassis and Thomas Vojta Influence of super-ohmic dissipation on a disordered quantum critical point Thomas Vojta, José A Hoyos, Priyanka Mohan and Rajesh Narayanan The van Hemmen-Kondo model for disordered cerium systems S G Magalhaes, F M Zimmer and B Coqblin Chemical pressure, dilution and disorder in the heavy fermion compounds Ce3 - xLaxPd20Si6 (x = 1/3, 2/3) H Winkler, K-A Lorenzer, S Laumann, J Custers, A Prokofiev and S Paschen Magnetism of fine particles of Kondo lattices, obtained by high-energy ball-milling E V Sampathkumaran, K Mukherjee, Kartik K Iyer, Niharika Mohapatra and Sitikantha D Das Heavy fermion scaling: uranium versus cerium and ytterbium compounds J M Lawrence, C H Wang, A D Christianson and E D Bauer Temperature dependence of hybridization gaps in metallic heavy-fermion systems Xiaodong Yang, Peter S Riseborough and Tomasz Durakiewicz Low-energy properties of the Kondo lattice model O Bodensiek, R Žitko, R Peters and T Pruschke Temperature dependence of the zero-bias anomaly in the Anderson-Hubbard model: insights from an ensemble of two-site systems R Wortis and W A Atkinson A charge density wave in the hidden order state of URu2Si2 Jung-Jung Su, Yonatan Dubi, Peter Wölfle and Alexander V Balatsky Field-induced suppression of the heavy-fermion state in YbRh2Si2 Gertrud Zwicknagl Discontinuous Hall coefficient at the quantum critical point in YbRh2Si2 Sven Friedemann, Niels Oeschler, Steffen

PREFACE: International Conference on Strongly Correlated Electron Systems (SCES 2011)

NASA Astrophysics Data System (ADS)

Littlewood, P. B.; Lonzarich, G. G.; Saxena, S. S.; Sutherland, M. L.; Sebastian, S. E.; Artacho, E.; Grosche, F. M.; Hadzibabic, Z.

2012-11-01

, Kyushu G. R. Stewart, Gainesville C. Di Castro, Rome R. Osborn, Chicago H. Takagi, Tokyo M. Eremets, Mainz S. Ovchnikov, Krasnoyarsk L. Taillefer, Sherbrooke M. Fiebig, Bonn C. Panagopoulos, Singapore & Heraklion J. D. Thompson, Los Alamos Z. FiskIrvine S. Paschen, Vienna Y. Tokura, Tokyo J. Flouquet, Grenoble C. Pfleiderer, Munich K. Ueda, Tokyo P. Fulde, Dresden P. Phillips, Urbana C. M. Varma, Riverside A. Geim, Manchester D. Pines, Davis T. Vojta, Rolla J.C. Gomez-Sal, Santander T. V. Ramakrishnan, Bangalore N.L. Wang, Beijing A. Kavokin, Southampton A.K. Raychaudhuri, Calcutta T. Xiang, Beijing J. Goodenough, Austin M. Reifers, Kosice L. Yu, Beijing H. Hosono, Tokyo P. Riseborough, Philadelphia F. C. Zhang, Hong Kong S. Julian, Toronto M. L Saboungi, Orleans G. Zwicknagl, Braunschweig Operational Team Anson Cheung (co-ordinator)Hyeong Jin KimPaul Nahai-Williamson Beng Tan (co-ordinator)Jack GillettPeter Logg Cheng Liu (co-ordinator)Jo WensleyPrajakti Kalra Swee K. Goh (co-ordinator)Jonathan SilverRichard Brierley Adam HalskiLara SibleyRobert Hay Edd CavannaLeona HopeSeb Haines Felix NissenLina KlintbergSitikantha Das Gareth ConduitMarianne BauerStephen Rowley Gerie LonzarichMatt BurgessSven Friedemann Greg LeverMuhammad Ahsan ZebYang Zou Hannah PriceNick BristoweYiqian Xu Haruka TaniguchiOleksandr PoplavskyyZhuo Feng

Adaptive Optics for Industry and Medicine

NASA Astrophysics Data System (ADS)

Dainty, Christopher

2008-01-01

at Iris AO (poster paper) / Michael A. Helmbrecht ... [et al.]. Electrostatic push pull mirror improvernents in visual optics (poster paper) / S. Bonora and L. Poletto. 25cm bimorph mirror for petawatt laser / S. Bonora ... [et al.]. Hysteresis compensation for piezo deformable mirror (poster paper) / H. Song ... [et al.]. Static and dynamic responses of an adaptive optics ferrofluidic mirror (poster paper) / A. Seaman ... [et al.]. New HDTV (1920 x 1080) phase-only SLM (poster paper) / Stefan Osten and Sven Krueger. Monomorph large aperture deformable mirror for laser applications (poster paper) / J-C Sinquin, J-M Lurcon, C. Guillemard. Low cost, high speed for adaptive optics control (oral paper) / Christopher D. Saunter and Gordon D. Love. Open loop woofer-tweeter adaptive control on the LAO multi-conjugate adaptive optics testbed (oral paper) / Edward Laag, Don Gavel and Mark Ammons -- pt. 2. Wavefront sensors. Wave front sensorless adaptive optics for imaging and microscopy (invited paper) / Martin J. Booth, Delphine Débarre and Tony Wilson. A fundamental limit for wavefront sensing (oral paper) / Carl Paterson. Coherent fibre-bundle wavefront sensor (oral paper) / Brian Vohnsen, I. Iglesias and Pablo Artal. Maximum-likelihood methods in wave-front sensing: nuisance parameters (oral paper) / David Lara, Harrison H. Barrett, and Chris Dainty. Real-time wavefront sensing for ultrafast high-power laser beams (oral paper) / Juan M. Bueno ... [et al.]. Wavefront sensing using a random phase screen (oral paper) / M. Loktev, G. Vdovin and O. Soloviev. Quadri-Wave Lateral Shearing Interferometry: a new mature technique for wave front sensing in adaptive optics (oral paper) / Benoit Wattellier ... [et al.]. In vivo measurement of ocular aberrations with a distorted grating wavefront sensor (oral paper) / P. Harrison ... [et al.]. Position-sensitive detector designed with unusual CMOS layout strategies for a Hartman-Shack wavefront sensor (oral Paper) / Davies W. de Lima

EDITORIAL: Focus on Quantum Cryptography: Theory and Practice FOCUS ON QUANTUM CRYPTOGRAPHY: THEORY AND PRACTICE

NASA Astrophysics Data System (ADS)

Lütkenhaus, N.; Shields, A. J.

2009-04-01

descriptions and are based on observable tests during the run of QKD sessions. It is now 25 years since the first proposal for QKD was published and 20 since the first experimental realization. The intervening years have brought several technological and theoretical advances, which have driven new insights into the application of quantum theory to the wider field of information technology. We are looking forward to the new twists and turns this field will take in the next 25 years! Focus on Quantum Cryptography: Theory and Practice Contents Security of continuous-variable quantum key distribution: towards a de Finetti theorem for rotation symmetry in phase space A Leverrier, E Karpov, P Grangier and N J Cerf Optical networking for quantum key distribution and quantum communications T E Chapuran, P Toliver, N A Peters, J Jackel, M S Goodman, R J Runser, S R McNown, N Dallmann, R J Hughes, K P McCabe, J E Nordholt, C G Peterson, K T Tyagi, L Mercer and H Dardy Proof-of-concept of real-world quantum key distribution with quantum frames I Lucio-Martinez, P Chan, X Mo, S Hosier and W Tittel Composability in quantum cryptography Jörn Müller-Quade and Renato Renner Distributed authentication for randomly compromised networks Travis R Beals, Kevin P Hynes and Barry C Sanders Feasibility of 300 km quantum key distribution with entangled states Thomas Scheidl, Rupert Ursin, Alessandro Fedrizzi, Sven Ramelow, Xiao-Song Ma, Thomas Herbst, Robert Prevedel, Lothar Ratschbacher, Johannes Kofler, Thomas Jennewein and Anton Zeilinger Decoy-state quantum key distribution with both source errors and statistical fluctuations Xiang-Bin Wang, Lin Yang, Cheng-Zhi Peng and Jian-Wei Pan High rate, long-distance quantum key distribution over 250 km of ultra low loss fibres D Stucki, N Walenta, F Vannel, R T Thew, N Gisin, H Zbinden, S Gray, C R Towery and S Ten Topological optimization of quantum key distribution networks R Alléaume, F Roueff, E Diamanti and N Lütkenhaus The SECOQC quantum key

PREFACE: XVth International Conference on Calorimetry in High Energy Physics (CALOR2012)

NASA Astrophysics Data System (ADS)

Akchurin, Nural

2012-12-01

/Saclay Irfu/SPP FRANCAVILLA, Paolo IFAE Barcelona GATAULLIN, Marat California Institute of Technology GATTO, Corrado INFN-Napoli GAUDIO, Gabriella INFN-Pavia GERMANI, Stefano INFN-Perugia Goldenzweig, Pablo University of Rochester GRAF, Norman SLAC National Accelerator Laboratory GROOM, Don Lawrence Berkeley Lab GUARDINCERRI, Elena Los Alamos National Laboratory HAUPTMAN, John Iowa State University HENRIQUES, Ana CERN HUANG, Jin Los Alamos National Laboratory HU, Tao IHEP-Beijing, CAS JIANG, Xiaodong Los Alamos National Laboratory JUI, Charles University of Utah KAPUSTINSKY, Jon Los Alamos National Laboratory KIBILKO, Mark SE Technical Sales, Inc. KIRSCHENMANN, Henning University of Hamburg KISTENEV, Edouard Brookhaven National Laboratory KLIMEK, Pawel Stockholm Universitet KROEGER, Robert University of Mississippi LECOQ, Paul CERN LEE, Sehwook Texas Tech University LEE, Sung-Won Texas Tech University LIVAN, Michele Pavia University LUTZ, Benjamin DESY MAGILL, Stephen Argonne National Laboratory MATHIS, Mark College of William and Mary MATTHEWS, John University of Utah MENKE, Sven Max-Planck-Institut fuer Physik MOULSON, Matthew INFN-Frascati NAGEL, Martin Max-Planck-Institut fuer Physik NAKAMURA, Isamu KEK NEMECEK, Stanislav FZU AVCR Praha NESSI-TEDALDI, Francesca ETH Zurich NOVOTNY, Rainer 2nd Physics Institute, University Giessen OREGLIA, Mark University of Chicago PERLOFF, Alexx Texas A&M University PETYT, David Rutherford Appleton Laboratory RAHMAT, Rahmat University of Mississippi RAMILLI, Marco Hamburg Universitaet ROSIER LEES, Sylvie LAPP- IN2P3-CNRS RUTHERFOORD, John University of Arizona SAKUMA, Tai Texas A&M University SANTIAGO CERQUEIRA, Augusto Federal University of Juiz de Fora SARRA, Ivano INFN-Frascati SEIDEL, Sally University of New Mexico SEIFERT, Frank TU Dresden, Germany SHAMIM, Mansoora University of Oregon SIMON, Frank Max-Planck-Institute for Physics STAFFAN, Paul Wiener Plein and Baus, Corp Dr. STAROVOITOV, Pavel DESY TABARELLI DE FATIS, Tommaso