Biochemical and Genetic Analysis of the Chlamydia GroEL Chaperonins

PubMed Central

Illingworth, Melissa; Hooppaw, Anna J.; Ruan, Lu

2017-01-01

ABSTRACT Chaperonins are essential for cellular growth under normal and stressful conditions and consequently represent one of the most conserved and ancient protein classes. The paradigm Escherichia coli chaperonin, EcGroEL, and its cochaperonin, EcGroES, assist in the folding of proteins via an ATP-dependent mechanism. In addition to the presence of groEL and groES homologs, groEL paralogs are found in many bacteria, including pathogens, and have evolved poorly understood species-specific functions. Chlamydia spp., which are obligate intracellular bacteria, have reduced genomes that nonetheless contain three groEL genes, Chlamydia groEL (ChgroEL), ChgroEL2, and ChgroEL3. We hypothesized that ChGroEL is the bona fide chaperonin and that the paralogs perform novel Chlamydia-specific functions. To test our hypothesis, we investigated the biochemical properties of ChGroEL and its cochaperonin, ChGroES, and queried the in vivo essentiality of the three ChgroEL genes through targeted mutagenesis in Chlamydia trachomatis. ChGroEL hydrolyzed ATP at a rate 25% of that of EcGroEL and bound with high affinity to ChGroES, and the ChGroEL-ChGroES complex could refold malate dehydrogenase (MDH). The chlamydial ChGroEL was selective for its cognate cochaperonin, ChGroES, while EcGroEL could function with both EcGroES and ChGroES. A P35T ChGroES mutant (ChGroESP35T) reduced ChGroEL-ChGroES interactions and MDH folding activities but was tolerated by EcGroEL. Both ChGroEL-ChGroES and EcGroEL-ChGroESP35T could complement an EcGroEL-EcGroES mutant. Finally, we successfully inactivated both paralogs but not ChgroEL, leading to minor growth defects in cell culture that were not exacerbated by heat stress. Collectively, our results support novel functions for the paralogs and solidify ChGroEL as a bona fide chaperonin that is biochemically distinct from EcGroEL. IMPORTANCE Chlamydia is an important cause of human diseases, including pneumonia, sexually transmitted infections, and trachoma. The chlamydial chaperonin ChGroEL and chaperonin paralog ChGroEL2 have been associated with survival under stress conditions, and ChGroEL is linked with immunopathology elicited by chlamydial infections. However, their exact roles in bacterial survival and disease remain unclear. Our results further substantiate the hypotheses that ChGroEL is the primary chlamydial chaperonin and that the paralogs play specialized roles during infection. Furthermore, ChGroEL and the mitochondrial GroEL only functioned with their cochaperonin, in contrast to the promiscuous nature of GroEL from E. coli and Helicobacter pylori, which might indicate a divergent evolution of GroEL during the transition from a free-living organism to an obligate intracellular lifestyle. PMID:28396349

Purification and characterization of the GroESLx chaperonins from the symbiotic X-bacteria in Amoeba proteus.

PubMed

Jung, G H; Ahn, T I

2001-12-01

GroELx and GroESx proteins of symbiotic X-bacteria from Amoeba proteus were overproduced in Escherichia coli transformed with pAJX91 and pUXGPRM, respectively, and their chaperonin functions were assayed. We utilized sigma(70)-dependent specific promoters of groEx in the expression vectors and grew recombinant cells at 37 degrees C to minimize coexpression of host groE of E. coli. For purifying the proteins, we applied the principle of heat stability for GroELx and pI difference for GroESx to minimize copurification with the hosts GroEL and GroES, respectively. After ultracentrifugation in a sucrose density gradient, the yield and purity of GroELx were 56 and 89%, respectively. The yield and purity of GroESx after anion-exchange chromatography were 62 and 91%, respectively. Purified GroELx had an ATPase activity of 53.2 nmol Pi released/min/mg protein at 37 degrees C. The GroESx protein inhibited ATPase activity of GroELx to 60% of the control at a ratio of 1 for GroESx-7mer/GroELx-14mer. GroESLx helped refolding of urea-unfolded rhodanese up to 80% of the native activity at 37 degrees C. By chemical cross-linking analysis, oligomeric properties of GroESx and GroELx were confirmed as GroESx(7) and GroELx(14) in two stacks of GroELx(7). In this study, we developed a method for the purification of GroESLx and demonstrated that their chaperonin function is homologous to GroESL of E. coli. Copyright 2001 Elsevier Science.

Observations of Accreting Pulsars

NASA Technical Reports Server (NTRS)

Bildsten, Lars; Chakrabarty, Deepto; Chiu, John; Finger, Mark H.; Koh, Danny T.; Nelson, Robert W.; Prince, Thomas A.; Rubin, Bradley C.; Scott, D. Matthew; Stollberg, Mark;

Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses.

PubMed

Ventura, Marco; Canchaya, Carlos; Zink, Ralf; Fitzgerald, Gerald F; van Sinderen, Douwe

2004-10-01

The bacterial heat shock response is characterized by the elevated expression of a number of chaperone complexes, including the GroEL and GroES proteins. The groES and groEL genes are highly conserved among eubacteria and are typically arranged as an operon. Genome analysis of Bifidobacterium breve UCC 2003 revealed that the groES and groEL genes are located in different chromosomal regions. The heat inducibility of the groEL and groES genes of B. breve UCC 2003 was verified by slot blot analysis. Northern blot analyses showed that the cspA gene is cotranscribed with the groEL gene, while the groES gene is transcribed as a monocistronic unit. The transcription initiation sites of these two mRNAs were determined by primer extension. Sequence and transcriptional analyses of the region flanking the groEL and groES genes of various bifidobacteria revealed similar groEL-cspA and groES gene units, suggesting a novel genetic organization of these chaperones. Phylogenetic analysis of the available bifidobacterial groES and groEL genes suggested that these genes evolved differently. Discrepancies in the phylogenetic positioning of groES-based trees make this gene an unreliable molecular marker. On the other hand, the bifidobacterial groEL gene sequences can be used as an alternative to current methods for tracing Bifidobacterium species, particularly because they allow a high level of discrimination between closely related species of this genus.

Graphene-Immobilized fac-Re(bipy)(CO)3Cl for Syngas Generation from Carbon Dioxide.

PubMed

Zhou, Xin; Micheroni, Daniel; Lin, Zekai; Poon, Christopher; Li, Zhong; Lin, Wenbin

2016-02-17

We report the synthesis of fac-M(4-amino-bipy)(CO)3X (M = Mn and X = Br or M = Re and X = Cl, with bipy = 2,2'-bipyridine), their immobilization on graphene oxide (GrO) via diazonium grafting, and the use of Re-functionalized GrO for electrocatalytic syngas production. Infrared (IR) spectroscopy, X-ray absorption fine structure (XAFS) spectroscopy, and electrocatalysis indicated successful grafting of the Re catalyst onto GrO. Re-functionalized GrO was then deposited onto a glassy carbon electrode (GCE) for CO2 reduction. Investigation of the Re-functionalized GCE for syngas production was performed in a CO2-saturated acetonitrile solution with 3.1 M H2O as the proton source and 0.1 M tetrabutylammonium hexafluorophosphate (TBAPF6) as the supporting electrolyte. Cyclic voltammetry (CV), controlled potential electrolysis (CPE), and gas chromatography (GC) were employed to determine its CO2-to-CO conversion performance. The Re catalyst shows a turnover frequency (TOF) for generating CO up to 4.44 s(-1) with a CO/H2 ratio of 7:5.

GroEL stimulates protein folding through forced unfolding

PubMed Central

Lin, Zong; Madan, Damian; Rye, Hays S

2013-01-01

Many proteins cannot fold without the assistance of chaperonin machines like GroEL and GroES. The nature of this assistance, however, remains poorly understood. Here we demonstrate that unfolding of a substrate protein by GroEL enhances protein folding. We first show that capture of a protein on the open ring of a GroEL–ADP–GroES complex, GroEL’s physiological acceptor state for non-native proteins in vivo, leaves the substrate protein in an unexpectedly compact state. Subsequent binding of ATP to the same GroEL ring causes rapid, forced unfolding of the substrate protein. Notably, the fraction of the substrate protein that commits to the native state following GroES binding and protein release into the GroEL–GroES cavity is proportional to the extent of substrate-protein unfolding. Forced protein unfolding is thus a central component of the multilayered stimulatory mechanism used by GroEL to drive protein folding. PMID:18311152

The groEL2 gene, but not groEL1, is required for biosynthesis of the secondary metabolite myxovirescin in Myxococcus xanthus DK1622.

PubMed

Wang, Yan; Li, Xi; Zhang, Wenyan; Zhou, Xiuwen; Li, Yue-zhong

2014-03-01

Myxococcus xanthus DK1622 possesses two copies of the groEL gene: groEL1, which participates in development, and groEL2, which is involved in the predatory ability of cells. In this study, we determined that the groEL2 gene is required for the biosynthesis of the secondary metabolite myxovirescin (TA), which plays essential roles in predation. The groEL2-knockout mutant strain was defective in producing a zone of inhibition and displayed decreased killing ability against Escherichia coli, while the groEL1-knockout mutant strain exhibited little difference from the wild-type strain DK1622. HPLC revealed that deletion of the groEL2 gene blocked the production of TA, which was present in the groEL1-knockout mutant. The addition of exogenous TA rescued the inhibition and killing abilities of the groEL2-knockout mutant against E. coli. Analysis of GroEL domain-swapping mutants indicated that the C-terminal equatorial domain of GroEL2 was essential for TA production, while the N-terminal equatorial or apical domains of GroEL2 were not sufficient to rescue TA production of the groEL2 knockout.

Chaperonin GroEL-GroES Functions as both Alternating and Non-Alternating Engines.

PubMed

Yamamoto, Daisuke; Ando, Toshio

2016-07-31

A double ring-shaped GroEL consisting of 14 ATPase subunits assists protein folding, together with co-chaperonin GroES. The dynamic GroEL-GroES interaction is actively involved in the chaperonin reaction. Therefore, revealing this dynamic interaction is a key to understanding the operation principle of GroEL. Nevertheless, how this interaction proceeds in the reaction cycle has long been controversial. Here, we directly imaged GroEL-GroES interaction in the presence of disulfide-reduced α-lactalbumin as a substrate protein using high-speed atomic force microscopy. This real-time imaging revealed the occurrence of primary, symmetric GroEL:GroES2 and secondary, asymmetric GroEL:GroES1 complexes. Remarkably, the reaction was observed to often branch into main and side pathways. In the main pathway, alternate binding and release of GroES occurs at the two rings, indicating tight cooperation between the two rings. In the side pathway, however, this cooperation is disrupted, resulting in the interruption of alternating rhythm. From various properties observed for both pathways, we provide mechanistic insight into the alternate and non-alternate operations of the two-engine system. Copyright © 2016 Elsevier Ltd. All rights reserved.

Chaperonin GroEL Reassembly: An Effect of Protein Ligands and Solvent Composition

PubMed Central

Ryabova, Nataliya; Marchenkov, Victor; Kotova, Nina; Semisotnov, Gennady

2014-01-01

Chaperonin GroEL is a complex oligomeric heat shock protein (Hsp60) assisting the correct folding and assembly of other proteins in the cell. An intriguing question is how GroEL folds itself. According to the literature, GroEL reassembly is dependent on chaperonin ligands and solvent composition. Here we demonstrate dependence of GroEL reassembly efficiency on concentrations of the essential factors (Mg2+, ADP, ATP, GroES, ammonium sulfate, NaCl and glycerol). Besides, kinetics of GroEL oligomerization in various conditions was monitored by the light scattering technique and proved to be two-exponential, which suggested accumulation of a certain oligomeric intermediate. This intermediate was resolved as a heptamer by nondenaturing blue electrophoresis of GroEL monomers during their assembly in the presence of both Mg-ATP and co-chaperonin GroES. Presumably, this intermediate heptamer plays a key role in formation of the GroEL tetradecameric particle. The role of co-chaperonin GroES (Hsp10) in GroEL assembly is also discussed. PMID:24970225

Galactic Black Holes in the Hard State: A Multi-Wavelength View of Accretion and Ejection

NASA Technical Reports Server (NTRS)

Kalemci; Tomsick, John A.; Migliari; Corbel; Markoff

2010-01-01

The canonical hard state is associated with emission from all three fundamental accretion components: the accretion disk, the hot accretion disk corona and the jet. On top of these, the hard state also hosts very rich temporal variability properties (low frequency QPOs in the PDS, time lags, long time scale evolution). Our group has been working on the major questions of the hard state both observationally (with mult i-wavelength campaigns using RXTE, Swift, Suzaku, Spitzer, VLA, ATCA, SMARTS) and theoretically (through jet models that can fit entire SEDs). Through spectral and temporal analysis we seek to determine the geometry of accretion components, and relate the geometry to the formation and emission from a jet. In this presentation I will review the recent contributions of our group to the field, including the Swift results on the disk geometry at low accretion rates, the jet model fits to the hard state SEDs (including Spitzer data) of GRO J1655-40, and the final results on the evolution of spectral (including X-ray, radio and infrared) and temporal properties of elected black holes in the hard states. I will also talk about impact of ASTROSAT to the science objective of our group.

Developing principles of sustainability and stakeholder engagement for "gentle" remediation approaches: the European context.

PubMed

Cundy, A B; Bardos, R P; Church, A; Puschenreiter, M; Friesl-Hanl, W; Müller, I; Neu, S; Mench, M; Witters, N; Vangronsveld, J

2013-11-15

Gentle Remediation Options (GRO) are risk management strategies or techniques for contaminated sites that result in no gross reduction in soil functionality (or a net gain) as well as risk management. Intelligently applied GROs can provide: (a) rapid risk management via pathway control, through containment and stabilisation, coupled with a longer term removal or immobilisation/isolation of the contaminant source term; and (b) a range of additional economic (e.g. biomass generation), social (e.g. leisure and recreation) and environmental (e.g. CO2 sequestration) benefits. In order for these benefits to be optimised or indeed realised, effective stakeholder engagement is required. This paper reviews current sector practice in stakeholder engagement and its importance when implementing GRO and other remediation options. From this, knowledge gaps are identified, and strategies to promote more effective stakeholder engagement during GRO application are outlined. Further work is required on integrating stakeholder engagement strategies into decision support systems and tools for GRO (to raise the profile of the benefits of effective stakeholder engagement and participation, particularly with sector professionals), and developing criteria for the identification of different stakeholder profiles/categories. Demonstrator sites can make a significant contribution to stakeholder engagement via providing evidence on the effectiveness of GRO under varying site contexts and conditions. Effective and sustained engagement strategies however will be required to ensure that site risk is effectively managed over the longer-term, and that full potential benefits of GRO (e.g. CO2 sequestration, economic returns from biomass generation and "leverage" of marginal land, amenity and educational value, ecosystem services) are realised and communicated to stakeholders. Copyright © 2013 Elsevier Ltd. All rights reserved.

[Prokaryotic expression of Leptospira interrogans groEL gene and immunoprotection of its products in hamsters].

PubMed

Li, Xiaoyu; Wang, Yinhuan; Yan, Jie; Cheng, Dongqing

2013-03-01

To construct a prokaryotic expression system of groEL gene of Leptospira interrogans serogroup Icterohaemorrhagia serovar Lai strain Lai, and to determine the immunoprotective effect of recombinant GroEL protein (rGroEL) in LVG hamsters. The groEL gene was amplified by high fidelity PCR and the amplification products were then sequenced. A prokaryotic expression system of groEL gene was constructed using routine genetic engineering technique. SDS-PAGE plus Bio-Rad Gel Image Analyzer was applied to examine the expression and dissolubility of rGroEL protein while Ni-NTA affinity chromatography was used to extract the expressed rGroEL. The immunoprotective rate in rGroEL-immunized LVG hamsters was determined after challenge with L.interrogans strain Lai. The cross agglutination titers of sera from immunized hamsters with different L.interrogans serogroups were detected using MAT. The nucleotide and amino acid sequences of the cloned groEL gene were the same as those reported in GenBank. The constructed prokaryotic expression system of groEL gene expressed soluble rGroEL. The immunoprotective rates of 100 and 200 μg rGroEL in LVG hamsters were 50.0 % and 75.0%, respectively. The sera from the rGroEL-immunized LVG hamsters agglutinated all the L.interrogans serogroups tested with different levels. The GroEL protein is a genus-specific immunoprotective antigen of L.interrogans and can be used to develop an universal genetically engineering vaccine of Leptospira.

Development of the instruments for the Gamma Ray Observatory

NASA Technical Reports Server (NTRS)

Madden, J. J.; Kniffen, D. A.

1986-01-01

The Gamma Ray Observatory (GRO) is to be launched in 1988 by the STS. The GRO will feature four very large instruments: the Oriented Scintillation Spectrometer Experiment (OSSE), the Imaging Compton Telescope (COMPTEL), the Energetic Gamma Ray Experiment Telescope (EGRET) and the Burst and Transient Source Experiment (BATSE). The instruments weigh from 900-1200 kg each, and required the development of specialized lifting and dolly devices to permit their assembly, manipulation and testing. The GRO is intended a{s a tool for studying discrete celestial objects such as black holes, neutron stars and other gamma-ray emitting objects, scanning for nucleosynthesis processes, mapping the Galaxy and other, high energy galaxies in terms of gamma rays, searching for cosmological effects and observing gamma ray bursts. The instruments will be sensitive from the upper end mof X-rya wavelengths to the highest energies possible. Details of the hardware and performance specifications of each of the instruments are discussed.

LiGRO: a graphical user interface for protein-ligand molecular dynamics.

PubMed

Kagami, Luciano Porto; das Neves, Gustavo Machado; da Silva, Alan Wilter Sousa; Caceres, Rafael Andrade; Kawano, Daniel Fábio; Eifler-Lima, Vera Lucia

2017-10-04

To speed up the drug-discovery process, molecular dynamics (MD) calculations performed in GROMACS can be coupled to docking simulations for the post-screening analyses of large compound libraries. This requires generating the topology of the ligands in different software, some basic knowledge of Linux command lines, and a certain familiarity in handling the output files. LiGRO-the python-based graphical interface introduced here-was designed to overcome these protein-ligand parameterization challenges by allowing the graphical (non command line-based) control of GROMACS (MD and analysis), ACPYPE (ligand topology builder) and PLIP (protein-binder interactions monitor)-programs that can be used together to fully perform and analyze the outputs of complex MD simulations (including energy minimization and NVT/NPT equilibration). By allowing the calculation of linear interaction energies in a simple and quick fashion, LiGRO can be used in the drug-discovery pipeline to select compounds with a better protein-binding interaction profile. The design of LiGRO allows researchers to freely download and modify the software, with the source code being available under the terms of a GPLv3 license from http://www.ufrgs.br/lasomfarmacia/ligro/ .

Differential conformational modulations of MreB folding upon interactions with GroEL/ES and TRiC chaperonin components

PubMed Central

Moparthi, Satish Babu; Carlsson, Uno; Vincentelli, Renaud; Jonsson, Bengt-Harald; Hammarström, Per; Wenger, Jérôme

2016-01-01

Here, we study and compare the mechanisms of action of the GroEL/GroES and the TRiC chaperonin systems on MreB client protein variants extracted from E. coli. MreB is a homologue to actin in prokaryotes. Single-molecule fluorescence correlation spectroscopy (FCS) and time-resolved fluorescence polarization anisotropy report the binding interaction of folding MreB with GroEL, GroES and TRiC. Fluorescence resonance energy transfer (FRET) measurements on MreB variants quantified molecular distance changes occurring during conformational rearrangements within folding MreB bound to chaperonins. We observed that the MreB structure is rearranged by a binding-induced expansion mechanism in TRiC, GroEL and GroES. These results are quantitatively comparable to the structural rearrangements found during the interaction of β-actin with GroEL and TRiC, indicating that the mechanism of chaperonins is conserved during evolution. The chaperonin-bound MreB is also significantly compacted after addition of AMP-PNP for both the GroEL/ES and TRiC systems. Most importantly, our results showed that GroES may act as an unfoldase by inducing a dramatic initial expansion of MreB (even more than for GroEL) implicating a role for MreB folding, allowing us to suggest a delivery mechanism for GroES to GroEL in prokaryotes. PMID:27328749

Distinct Stabilities of the Structurally Homologous Heptameric Co-Chaperonins GroES and gp31

NASA Astrophysics Data System (ADS)

Dyachenko, Andrey; Tamara, Sem; Heck, Albert J. R.

2018-05-01

The GroES heptamer is the molecular co-chaperonin that partners with the tetradecamer chaperonin GroEL, which assists in the folding of various nonnative polypeptide chains in Escherichia coli. Gp31 is a structural and functional analogue of GroES encoded by the bacteriophage T4, becoming highly expressed in T4-infected E. coli, taking over the role of GroES, favoring the folding of bacteriophage proteins. Despite being slightly larger, gp31 is quite homologous to GroES in terms of its tertiary and quaternary structure, as well as in its function and mode of interaction with the chaperonin GroEL. Here, we performed a side-by-side comparison of GroES and gp31 heptamer complexes by (ion mobility) tandem mass spectrometry. Surprisingly, we observed quite distinct fragmentation mechanisms for the GroES and gp31 heptamers, whereby GroES displays a unique and unusual bimodal charge distribution in its released monomers. Not only the gas-phase dissociation but also the gas-phase unfolding of GroES and gp31 were found to be very distinct. We rationalize these observations with the similar discrepancies we observed in the thermal unfolding characteristics and surface contacts within GroES and gp31 in the solution. From our data, we propose a model that explains the observed simultaneous dissociation pathways of GroES and the differences between GroES and gp31 gas-phase dissociation and unfolding. We conclude that, although GroES and gp31 exhibit high homology in tertiary and quaternary structure, they are quite distinct in their solution and gas-phase (un)folding characteristics and stability. [Figure not available: see fulltext.

Bacterial Heat Shock Protein GroEL (Hsp64) Exerts Immunoregulatory Effects on T Cells by Utilizing Apoptosis

PubMed Central

Nalbant, Ayten; Kant, Melis

2016-01-01

Aggregatibacter actinomycetemcomitans (Aa) expresses a 64-kDa GroEL protein belonging to the heat shock family of proteins. This protein has been shown to influence human host cells, but the apoptotic capacity of the GroEL protein regarding T cells is not yet known. The purpose of this study was to investigate the ability of A. actinomycetemcomitans GroEL (AaGroEL) protein to induce human peripheral blood T-cell apoptosis. Endogenous, purified AaGroEL protein was used as an antigen. In AaGroEL-treated T cells, the data indicated that phosphatidylserine exposure, an early apoptotic event, was dose- and time-dependent. The AaGroEL-treated T cells were also positive for active caspase-3 in a dose-dependent manner. The rate of AaGroEL-induced apoptosis was suppressed by the addition of the general caspase inhibitor Z-VAD-FMK. Furthermore, cleaved caspase-8 bands (40/36 kDa and 23 kDa) were identified in cells responding to AaGroEL. DNA fragmentation was also detected in the AaGroEL-treated T cells. Overall, we demonstrated that the endogenous GroEL from A. actinomycetemcomitans has the capacity to induce T-cell apoptosis. PMID:27736933

RXTE/PCA and Swift/XRT observations of GRO J1655-40 during decay

NASA Astrophysics Data System (ADS)

Homan, Jeroen; Kong, Albert; Tomsick, John; Miller, Jon; Campana, Sergio; Wijnands, Rudy; Belloni, Tomaso; Lewin, Walter

2005-10-01

Following its transition to the hard state (ATels #607,#612), we have continued our daily RXTE/PCA observations of the black hole X-ray transient GRO J1655-40 (see http://tahti.mit.edu/opensource/1655). Between September 23, when the source reached the hard state, and October 10, the RXTE/ PCA count rate decreased exponentially, with an e-folding time of ~7 days. After October 10 the decrease started to slow down and data from the last few days suggest that the count rate may have reached a constant level.

Repetitive Protein Unfolding by the trans Ring of the GroEL-GroES Chaperonin Complex Stimulates Folding*

PubMed Central

Lin, Zong; Puchalla, Jason; Shoup, Daniel; Rye, Hays S.

2013-01-01

A key constraint on the growth of most organisms is the slow and inefficient folding of many essential proteins. To deal with this problem, several diverse families of protein folding machines, known collectively as molecular chaperones, developed early in evolutionary history. The functional role and operational steps of these remarkably complex nanomachines remain subjects of active debate. Here we present evidence that, for the GroEL-GroES chaperonin system, the non-native substrate protein enters the folding cycle on the trans ring of the double-ring GroEL-ATP-GroES complex rather than the ADP-bound complex. The properties of this ATP complex are designed to ensure that non-native substrate protein binds first, followed by ATP and finally GroES. This binding order ensures efficient occupancy of the open GroEL ring and allows for disruption of misfolded structures through two phases of multiaxis unfolding. In this model, repeated cycles of partial unfolding, followed by confinement within the GroEL-GroES chamber, provide the most effective overall mechanism for facilitating the folding of the most stringently dependent GroEL substrate proteins. PMID:24022487

Probing the interaction mechanisms between transmembrane peptides and the chaperonin GroEL with fluorescence anisotropy

NASA Astrophysics Data System (ADS)

Wang, Xiaoqiang; Chen, Han; Lu, Xinwei; Chi, Haixia; Li, Shixin; Huang, Fang

2018-04-01

Proper translocation, membrane insertion and folding are crucial biophysical steps in the biogenesis of functional transmembrane peptides/proteins (TMPs). ATP-dependent chaperonins are able to regulate each of these processes, but the underlying mechanisms remain unclear. In this work, interaction between the bacterial chaperonin GroEL and a synthetic fluorescent transmembrane peptide was investigated by fluorescence anisotropy. Binding of the peptide with GroEL resulted in increased fluorescence anisotropy and intensity. The dissociation constant and binding stoichiometry, as assessed by titration of the peptide with GroEL, were estimated to be 0.6 ± 0.2 μM and 2.96 ± 0.35, respectively. Complementary study with the single-ring version of GroEL confirmed the high-affinity peptide binding, and indicates that the two GroEL rings may function alternatively in binding the peptides. The co-chaperonin GroES was found to be effective at releasing the peptides initially bound to GroEL with the help of ATP. Moreover, our observation with the single-ring GroEL mutant demonstrated that during the encapsulation of GroEL by GroES, the bound peptides may either be confined in the cage thus formed, or escape outside. Competitive binding experiments indicated that the peptides studied interact with GroEL through the paired helices H and I on its apical domain. Our spectroscopic studies revealed some basic mechanisms of interaction between transmembrane peptides and GroEL, which would be instrumental for deciphering the chaperonin-mediated TMP biogenesis.

A Multi-Walled Carbon Nanotube-based Biosensor for Monitoring Microcystin-LR in Sources of Drinking Water Supplies

EPA Science Inventory

A multi-walled carbon nanotube-based electrochemical biosensor is developed for monitoring microcystin-LR (MC-LR), a toxic cyanobacterial toxin, in sources of drinking water supplies. The biosensor electrodes are fabricated using dense, mm-long multi-walled CNT (MWCNT) arrays gro...

Species identification of mutans streptococci by groESL gene sequence.

PubMed

Hung, Wei-Chung; Tsai, Jui-Chang; Hsueh, Po-Ren; Chia, Jean-San; Teng, Lee-Jene

2005-09-01

The near full-length sequences of the groESL genes were determined and analysed among eight reference strains (serotypes a to h) representing five species of mutans group streptococci. The groES sequences from these reference strains revealed that there are two lengths (285 and 288 bp) in the five species. The intergenic spacer between groES and groEL appears to be a unique marker for species, with a variable size (ranging from 111 to 310 bp) and sequence. Phylogenetic analysis of groES and groEL separated the eight serotypes into two major clusters. Strains of serotypes b, c, e and f were highly related and had groES gene sequences of the same length, 288 bp, while strains of serotypes a, d, g and h were also closely related and their groES gene sequence lengths were 285 bp. The groESL sequences in clinical isolates of three serotypes of S. mutans were analysed for intraspecies polymorphism. The results showed that the groESL sequences could provide information for differentiation among species, but were unable to distinguish serotypes of the same species. Based on the determined sequences, a PCR assay was developed that could differentiate members of the mutans streptococci by amplicon size and provide an alternative way for distinguishing mutans streptococci from other viridans streptococci.

High-Energy Spectral and Temporal Characteristics of GRO J1008-57

NASA Astrophysics Data System (ADS)

Shrader, C. R.; Sutaria, F. K.; Singh, K. P.; Macomb, D. J.

1999-02-01

A transient X-ray source, GRO J1008-57, was discovered by the Burst and Transient Source Experiment (BATSE) on board the Compton Gamma Ray Observatory (CGRO) in 1993 July. It reached a maximum intensity of about 1.4 times that of the Crab, in the 20-60 keV energy band. Pulsations in the X-ray intensity were detected at a period of 93.5 s. It has subsequently been determined to be a member of the Be star subclass of X-ray transients. In addition to BATSE, GRO J1008-57 was observed during its outburst by several pointed high-energy experiments: ROSAT, ASCA, and CGRO/OSSE. These nonsimultaneous but contemporaneous observations took place near and shortly after the peak of the outburst light curve. We report for the first time on a combined analysis of the CGRO and ASCA data sets. We have attempted to model the broadband high-energy continuum distribution and phase-resolved spectra. The broadband, phase-averaged continuum is well approximated by a power law with an exponential cutoff. Evidence for 6.4 keV line emission due to Fe is presented based on our spectral analysis. The energy dependence of the pulse profiles is examined in order to determine the energy at which the low-energy double-peaked profile detected by ASCA evolves into single-peaked pulse profile detected by BATSE. We discuss the implications of this pulse profile for the magnetic field and beam distribution for GRO J1008-57. Analysis of the BATSE and Rossi X-Ray Timing Explorer/ASM flux histories suggests that Porbital~135 days. We further suggest that a transient disk is likely to form during episodes of outbursts.

The BATSE experiment on the Gamma Ray Observatory: Solar flare hard x ray and gamma-ray capabilities

NASA Technical Reports Server (NTRS)

Fishman, G. J.; Meegan, C. A.; Wilson, R. B.; Parnell, T. A.; Paciesas, W. S.; Pendleton, G. N.; Hudson, H. S.; Matteson, J. L.; Peterson, L. E.; Cline, T. L.

1989-01-01

The Burst and Transient Source Experiment (BATSE) for the Gamma Ray Observatory (GRO) consists of eight detector modules that provide full-sky coverage for gamma-ray bursts and other transient phenomena such as solar flares. Each detector module has a thin, large-area scintillation detector (2025 sq cm) for high time-resolution studies, and a thicker spectroscopy detector (125 sq cm) to extend the energy range and provide better spectral resolution. The total energy range of the system is 15 keV to 100 MeV. These 16 detectors and the associated onboard data system should provide unprecedented capabilities for observing rapid spectral changes and gamma-ray lines from solar flares. The presence of a solar flare can be detected in real-time by BATSE; a trigger signal is sent to two other experiments on the GRO. The launch of the GRO is scheduled for June 1990, so that BATSE can be an important component of the Max '91 campaign.

An analysis of the Kalman filter in the Gamma Ray Observatory (GRO) onboard attitude determination subsystem

NASA Technical Reports Server (NTRS)

Snow, Frank; Harman, Richard; Garrick, Joseph

1988-01-01

The Gamma Ray Observatory (GRO) spacecraft needs a highly accurate attitude knowledge to achieve its mission objectives. Utilizing the fixed-head star trackers (FHSTs) for observations and gyroscopes for attitude propagation, the discrete Kalman Filter processes the attitude data to obtain an onboard accuracy of 86 arc seconds (3 sigma). A combination of linear analysis and simulations using the GRO Software Simulator (GROSS) are employed to investigate the Kalman filter for stability and the effects of corrupted observations (misalignment, noise), incomplete dynamic modeling, and nonlinear errors on Kalman filter. In the simulations, on-board attitude is compared with true attitude, the sensitivity of attitude error to model errors is graphed, and a statistical analysis is performed on the residuals of the Kalman Filter. In this paper, the modeling and sensor errors that degrade the Kalman filter solution beyond mission requirements are studied, and methods are offered to identify the source of these errors.

Evidence for Neutron Star Formation from Accretion Induced Collapse of a White Dwarf

NASA Technical Reports Server (NTRS)

Paradijis, J. Van; VanDenHeuvel, E. P. J.; Kouveliotou, C.; Fishman, G. J.; Finger, M. H.; Lewin, W. H. G.

1997-01-01

The orbital parameters of the recently discovered transient burster/pulsar GRO J1744-28 indicate that this system is a low-mass X-ray binary in an advanced stage of its mass transfer, with several tenths of a solar mass already transferred from the donor to the compact star. All neutron stars known to have accreted such an amount have very weak magnetic fields, and this has led to the idea that the magnetic fields of neutron stars decay as a result of accretion. The observation of a strongly magnetized neutron star in GRO J1744-28 then suggests that this neutron star was formed recently as a result of the collapse of a white dwarf during an earlier stage of the current phase of mass transfer. It is shown that this model can consistently explain the observed characteristics of GRO J1744-28. Attractive progenitors for such an evolution are the luminous supersoft X-ray sources detected with ROSAT.

In-situ X-ray CT results of damage evolution in L6 ordinary chondrite meteorites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cuadra, Jefferson A.; Hazeli, Kavan; Ramesh, K. T.

2016-06-17

These are slides about in-situ X-ray CT results of damage evolution in L6 ordinary chondrite meteorites. The following topics are covered: mechanical and thermal damage characterization, list of Grosvenor Mountain (GRO) meteorite samples, in-situ x-ray compression test setup, GRO-chipped reference at 0 N - existing cracks, GRO-chipped loaded at 1580 N, in-situ x-ray thermal fatigue test setup, GRO-B14 room temperature reference, GRO-B14 Cycle 47 at 200°C, GRO-B14 Cycle 47 at room temperature, conclusions from qualitative analysis, future work and next steps. Conclusions are the following: Both GRO-Chipped and GRO-B14 had existing voids and cracks within the volume. These sites withmore » existing damage were selected for CT images from mechanically and thermally loaded scans since they are prone to damage initiation. The GRO-Chipped sample was loaded to 1580 N which resulted in a 14% compressive engineering strain, calculated using LVDT. Based on the CT cross sectional images, the GRO-B14 sample at 200°C has a thermal expansion of approximately 96 μm in height (i.e. ~1.6% engineering strain).« less

Periplasmic localization of a GroES homologue in Escherichia coli transformed with groESx cloned from Legionella-like endosymbionts in Amoeba proteus.

PubMed

Lee, J E; Ahn, T I

2000-10-01

Escherichia coli MC4100 transformed with a groE homologous operon cloned from X-bacteria accumulated large amounts of the gene product when cultured at 30 or 37 degrees C. Heat shock for 10-30 min at 42 degrees C or ethanol (5%) shock for 2 h increased GroESx levels to about twice that in E. coli grown at 30 degrees C. The subcellular localization of GroESx in transformed E. coli was determined by several subcellular fractionation methods, by the analysis of extracted proteins in SDS polyacrylamide gels and by assays of marker enzymes. The GroESx protein was detected in both the periplasmic and cytoplasmic extracts and a large amount of the protein was accumulated in the periplasm. The GroEL protein and recombinant beta-galactosidase were exclusively localized in the cytoplasmic fraction, eliminating the possibility that periplasmic GroESx might be due to simple overproduction. N-terminal amino acid sequencing confirmed that the protein resolved on a 2-D gel was GroESx. This work represents the first report of the periplasmic location of GroES homologues in E. coli.

GroEL-GroES assisted folding of multiple recombinant proteins simultaneously over-expressed in Escherichia coli.

PubMed

Goyal, Megha; Chaudhuri, Tapan K

2015-07-01

Folding of aggregation prone recombinant proteins through co-expression of chaperonin GroEL and GroES has been a popular practice in the effort to optimize preparation of functional protein in Escherichia coli. Considering the demand for functional recombinant protein products, it is desirable to apply the chaperone assisted protein folding strategy for enhancing the yield of properly folded protein. Toward the same direction, it is also worth attempting folding of multiple recombinant proteins simultaneously over-expressed in E. coli through the assistance of co-expressed GroEL-ES. The genesis of this thinking was originated from the fact that cellular GroEL and GroES assist in the folding of several endogenous proteins expressed in the bacterial cell. Here we present the experimental findings from our study on co-expressed GroEL-GroES assisted folding of simultaneously over-expressed proteins maltodextrin glucosidase (MalZ) and yeast mitochondrial aconitase (mAco). Both proteins mentioned here are relatively larger and aggregation prone, mostly form inclusion bodies, and undergo GroEL-ES assisted folding in E. coli cells during over-expression. It has been reported that the relative yield of properly folded functional forms of MalZ and mAco with the exogenous GroEL-ES assistance were comparable with the results when these proteins were overexpressed alone. This observation is quite promising and highlights the fact that GroEL and GroES can assist in the folding of multiple substrate proteins simultaneously when over-expressed in E. coli. This method might be a potential tool for enhanced production of multiple functional recombinant proteins simultaneously in E. coli. Copyright © 2015 Elsevier Ltd. All rights reserved.

Spectral determinations for discrete sources with EGRET

NASA Technical Reports Server (NTRS)

Hughes, E. B.; Nolan, P. L.

1990-01-01

The ability of the EGRET (Energetic Gamma-Ray Experimental Telescope) to determine the spectral parameters of point sources in 14-day exposures, as planned for the initial survey phase of the GRO (Gamma Ray Observatory) mission, is explored by numerical simulation. Results are given for both galactic and extragalactic objects as a function of source strength and for representative levels of diffuse background emission.

The Groucho Co-repressor Is Primarily Recruited to Local Target Sites in Active Chromatin to Attenuate Transcription

PubMed Central

Jennings, Barbara H.

2014-01-01

Gene expression is regulated by the complex interaction between transcriptional activators and repressors, which function in part by recruiting histone-modifying enzymes to control accessibility of DNA to RNA polymerase. The evolutionarily conserved family of Groucho/Transducin-Like Enhancer of split (Gro/TLE) proteins act as co-repressors for numerous transcription factors. Gro/TLE proteins act in several key pathways during development (including Notch and Wnt signaling), and are implicated in the pathogenesis of several human cancers. Gro/TLE proteins form oligomers and it has been proposed that their ability to exert long-range repression on target genes involves oligomerization over broad regions of chromatin. However, analysis of an endogenous gro mutation in Drosophila revealed that oligomerization of Gro is not always obligatory for repression in vivo. We have used chromatin immunoprecipitation followed by DNA sequencing (ChIP-seq) to profile Gro recruitment in two Drosophila cell lines. We find that Gro predominantly binds at discrete peaks (<1 kilobase). We also demonstrate that blocking Gro oligomerization does not reduce peak width as would be expected if Gro oligomerization induced spreading along the chromatin from the site of recruitment. Gro recruitment is enriched in “active” chromatin containing developmentally regulated genes. However, Gro binding is associated with local regions containing hypoacetylated histones H3 and H4, which is indicative of chromatin that is not fully open for efficient transcription. We also find that peaks of Gro binding frequently overlap the transcription start sites of expressed genes that exhibit strong RNA polymerase pausing and that depletion of Gro leads to release of polymerase pausing and increased transcription at a bona fide target gene. Our results demonstrate that Gro is recruited to local sites by transcription factors to attenuate rather than silence gene expression by promoting histone deacetylation and polymerase pausing. PMID:25165826

In silico engineering of aggregation-prone recombinant proteins for substrate recognition by the chaperonin GroEL.

PubMed

Kumar, Vipul; Punetha, Ankita; Sundar, Durai; Chaudhuri, Tapan K

2012-01-01

Molecular chaperones appear to have been evolved to facilitate protein folding in the cell through entrapment of folding intermediates on the interior of a large cavity formed between GroEL and its co-chaperonin GroES. They bind newly synthesized or non-native polypeptides through hydrophobic interactions and prevent their aggregation. Some proteins do not interact with GroEL, hence even though they are aggregation prone, cannot be assisted by GroEL for their folding. In this study, we have attempted to engineer these non-substrate proteins to convert them as the substrate for GroEL, without compromising on their function. We have used a computational biology approach to generate mutants of the selected proteins by selectively mutating residues in the hydrophobic patch, similar to GroES mobile loop region that are responsible for interaction with GroEL, and compared with the wild counterparts for calculation of their instability and aggregation propensities. The energies of the newly designed mutants were computed through molecular dynamics simulations. We observed increased aggregation propensity of some of the mutants formed after replacing charged amino acid residues with hydrophobic ones in the well defined hydrophobic patch, raising the possibility of their binding ability to GroEL. The newly generated mutants may provide potential substrates for Chaperonin GroEL, which can be experimentally generated and tested for their tendency of aggregation, interactions with GroEL and the possibility of chaperone-assisted folding to produce functional proteins.

Determination of Black Hole Mass in Cyg X-1 by Scaling of Spectral Index-QPO Frequency Correlation

NASA Technical Reports Server (NTRS)

Shaposhnikov, Nickolai; Titarchuk, Lev

2007-01-01

It is well established that timing and spectral properties of Galactic Black Hole (BH) X-ray binaries (XRB) are strongly correlated. In particular, it has been shown that low frequency Quasi-Periodic Oscillation (QPO) nu(sub low) - photon index GAMMA correlation curves have a specific pattern. In a number of the sources studied the shape of the index-low frequency QPO correlations are self-similar with a position offset in the nu(sub low) - GAMMA plane determined by a BH mass M(sub BH). Specifically, Titarchuk & Fiorito (2004) gave strong theoretical and observational arguments that the QPO frequency values in this nu(sub low) - GAMMA correlation should be inversely proportional to M(sub BH). A simple translation of the correlation for a given source along frequency axis leads to the observed correlation for another source. As a result of this translation one can obtain a scaling factor which is simply a BH mass ratio for these particular sources. This property of the correlations offers a fundamentally new method for BH mass determination in XRBs. Here we use the observed QPO-index correlations observed in three BH sources: GRO J1655-40, GRS 1915+105 and Cyg X-1. The BH mass of (6.3 plus or minus 0.5) solar mass in GRO J1655-40 is obtained using optical observations. RXTE observations during the recent 2005 outburst yielded sufficient data to establish the correlation pattern during both rise and decay of the event. We use GRO J1655-40 as a standard reference source to measure the BH mass in Cyg X-1. We also revisit the GRS 1915+105 data as a further test of our scaling method. We obtain the BH mass in Cyg X-1 in the range 7.6-9.9.

GroEL actively stimulates folding of the endogenous substrate protein PepQ.

PubMed

Weaver, Jeremy; Jiang, Mengqiu; Roth, Andrew; Puchalla, Jason; Zhang, Junjie; Rye, Hays S

2017-06-30

Many essential proteins cannot fold without help from chaperonins, like the GroELS system of Escherichia coli. How chaperonins accelerate protein folding remains controversial. Here we test key predictions of both passive and active models of GroELS-stimulated folding, using the endogenous E. coli metalloprotease PepQ. While GroELS increases the folding rate of PepQ by over 15-fold, we demonstrate that slow spontaneous folding of PepQ is not caused by aggregation. Fluorescence measurements suggest that, when folding inside the GroEL-GroES cavity, PepQ populates conformations not observed during spontaneous folding in free solution. Using cryo-electron microscopy, we show that the GroEL C-termini make physical contact with the PepQ folding intermediate and help retain it deep within the GroEL cavity, resulting in reduced compactness of the PepQ monomer. Our findings strongly support an active model of chaperonin-mediated protein folding, where partial unfolding of misfolded intermediates plays a key role.

Chaperonin GroE-facilitated refolding of disulfide-bonded and reduced Taka-amylase A from Aspergillus oryzae.

PubMed

Kawata, Y; Hongo, K; Mizobata, T; Nagai, J

1998-12-01

The refolding characteristics of Taka-amylase A (TAA) from Aspergillus oryzae in the presence of the chaperonin GroE were studied in terms of activity and fluorescence. Disulfide-bonded (intact) TAA and non-disulfide-bonded (reduced) TAA were unfolded in guanidine hydrochloride and refolded by dilution into buffer containing GroE. The intermediates of both intact and reduced enzymes were trapped by GroEL in the absence of nucleotide. Upon addition of nucleotides such as ATP, ADP, CTP or UTP, the intermediates were released from GroEL and recovery of activity was detected. In both cases, the refolding yields in the presence of GroEL and ATP were higher than spontaneous recoveries. Fluorescence studies of intrinsic tryptophan and a hydrophobic probe, 8-anilinonaphthalene-1-sulfonate, suggested that the intermediates trapped by GroEL assumed conformations with different hydrophobic properties. The presence of protein disulfide isomerase or reduced and oxidized forms of glutathione in addition to GroE greatly enhanced the refolding reaction of reduced TAA. These findings suggest that GroE has an ability to recognize folding intermediates of TAA protein and facilitate refolding, regardless of the existence or absence of disulfide bonds in the protein.

Radio synthesis imaging during the GRO solar campaign

NASA Technical Reports Server (NTRS)

Gary, Dale E.

1992-01-01

The Owens Valley (OVRO) Solar Array was recently expanded to 5 antennas. Using frequency synthesis, the 5-element OVRO Solar Array has up to 450 effective baselines, which can be employed as necessary to make maps at frequencies in the range 1 to 18 GHz. Fortuitously, the last of the 5 antennas was completed and brought into operation on 7 Jun., just in time for the Gamma Ray Observatory (GRO)/Max 1991 observing campaign. Many events were observed jointly with OVRO and the BATSE experiment on GRO, including the six larger events that are presented in tabular form. Unfortunately, the X flares that occurred during the campaign all occurred outside the OVRO time range. The UV coverage of the newly expanded solar array, combined with frequency synthesis, should give a more complete view of solar flares in the microwave range by providing simultaneous spatial and spectral resolution. A promising application of MEM (maximum entropy) is also being pursued that will use smoothness criteria in both the spatial and spectral domains to give brightness temperature maps at each observed frequency (up to 45 frequencies every 10 s). Such maps can be compared directly with the theory of microwave emission to yield plasma parameters in the source - notably the number and energy distribution of electrons, for comparison with the x ray and gamma ray results from GRO.

Dr. Fishman Reviewing Data From the Burst and Transient Source Experiment (BATSE)

NASA Technical Reports Server (NTRS)

1996-01-01

In this photograph, Dr. Gerald Fishman of the Marshall Space Flight Center (MSFC), a principal investigator of the Compton Gamma-Ray Observatory's (GRO's) instrument, the Burst and Transient Source Experiment (BATSE), and Dr. Chryssa Kouveliotou of Universities Space Research Associates review data from the BATSE. For nearly 9 years, GRO's Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center, kept a blinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of stars, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. Because gamma-rays are so powerful, they pass through conventional telescope mirrors. Instead of a mirror, the heart of each BATSE module was a large, flat, transparent crystal that generated a tiny flash of light when struck by a gamma-ray. With an impressive list of discoveries and diverse accomplishments, BATSE could claim to have rewritten astronomy textbooks. Launched aboard the Space Shuttle Orbiter Atlantis during the STS-35 mission in April 1991, the GRO reentered the Earth's atmosphere and ended its successful 9-year mission in June 2000.

groHMM: a computational tool for identifying unannotated and cell type-specific transcription units from global run-on sequencing data.

PubMed

Chae, Minho; Danko, Charles G; Kraus, W Lee

2015-07-16

Global run-on coupled with deep sequencing (GRO-seq) provides extensive information on the location and function of coding and non-coding transcripts, including primary microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and enhancer RNAs (eRNAs), as well as yet undiscovered classes of transcripts. However, few computational tools tailored toward this new type of sequencing data are available, limiting the applicability of GRO-seq data for identifying novel transcription units. Here, we present groHMM, a computational tool in R, which defines the boundaries of transcription units de novo using a two state hidden-Markov model (HMM). A systematic comparison of the performance between groHMM and two existing peak-calling methods tuned to identify broad regions (SICER and HOMER) favorably supports our approach on existing GRO-seq data from MCF-7 breast cancer cells. To demonstrate the broader utility of our approach, we have used groHMM to annotate a diverse array of transcription units (i.e., primary transcripts) from four GRO-seq data sets derived from cells representing a variety of different human tissue types, including non-transformed cells (cardiomyocytes and lung fibroblasts) and transformed cells (LNCaP and MCF-7 cancer cells), as well as non-mammalian cells (from flies and worms). As an example of the utility of groHMM and its application to questions about the transcriptome, we show how groHMM can be used to analyze cell type-specific enhancers as defined by newly annotated enhancer transcripts. Our results show that groHMM can reveal new insights into cell type-specific transcription by identifying novel transcription units, and serve as a complete and useful tool for evaluating functional genomic elements in cells.

GroEL1, a heat shock protein 60 of Chlamydia pneumoniae, impairs neovascularization by decreasing endothelial progenitor cell function.

PubMed

Lin, Yi-Wen; Huang, Chun-Yao; Chen, Yung-Hsiang; Shih, Chun-Ming; Tsao, Nai-Wen; Lin, Cheng-Yen; Chang, Nen-Chung; Tsai, Chien-Sung; Tsai, Hsiao-Ya; Tsai, Jui-Chi; Huang, Po-Hsun; Li, Chi-Yuan; Lin, Feng-Yen

2013-01-01

The number and function of endothelial progenitor cells (EPCs) are sensitive to hyperglycemia, hypertension, and smoking in humans, which are also associated with the development of atherosclerosis. GroEL1 from Chlamydia pneumoniae has been found in atherosclerotic lesions and is related to atherosclerotic pathogenesis. However, the actual effects of GroEL1 on EPC function are unclear. In this study, we investigate the EPC function in GroEL1-administered hind limb-ischemic C57BL/B6 and C57BL/10ScNJ (a toll-like receptor 4 (TLR4) mutation) mice and human EPCs. In mice, laser Doppler imaging, flow cytometry, and immunohistochemistry were used to evaluate the degree of neo-vasculogenesis, circulating level of EPCs, and expression of CD34, vWF, and endothelial nitric oxide synthase (eNOS) in vessels. Blood flow in the ischemic limb was significantly impaired in C57BL/B6 but not C57BL/10ScNJ mice treated with GroEL1. Circulating EPCs were also decreased after GroEL1 administration in C57BL/B6 mice. Additionally, GroEL1 inhibited the expression of CD34 and eNOS in C57BL/B6 ischemic muscle. In vitro, GroEL1 impaired the capacity of differentiation, mobilization, tube formation, and migration of EPCs. GroEL1 increased senescence, which was mediated by caspases, p38 MAPK, and ERK1/2 signaling in EPCs. Furthermore, GroEL1 decreased integrin and E-selectin expression and induced inflammatory responses in EPCs. In conclusion, these findings suggest that TLR4 and impaired NO-related mechanisms could contribute to the reduced number and functional activity of EPCs in the presence of GroEL1 from C. pneumoniae.

In situ sonochemical reduction and direct functionalization of graphene oxide: A robust approach with thermal and biomedical applications.

PubMed

Maktedar, Shrikant S; Mehetre, Shantilal S; Avashthi, Gopal; Singh, Man

2017-01-01

The rapid, robust, scalable and non-hazardous sonochemical approach for in situ reduction and direct functionalization of graphene oxide has been developed for non-toxic biomedical applications. The graphene oxide (GrO) was directly functionalized with tryptamine (TA) without using any hazardous acylating and coupling reagents. The reaction was completed within 20min. An impact of ultrasound was inferred for a direct functionalization with other conventional methods. The evolved electronic states were confirmed with near edge X-ray absorption fine structure (NEXAFS). The direct covalent functionalization and formation of f-(TA) GrO was proven with FTIR, 13 C solid state NMR, XPS, XRD, Raman' HRTEM, AFM and TGA. The total percentage weight loss in TGA confirms an enhanced thermal stability of f-(TA) GrO. The f-(TA) GrO was further explored for an investigation of in vitro antimicrobial activity to ensure the health and environmental safety. An outstanding antibacterial activity of f-(TA) GrO was found against gram positive Staphylococcus aureus at MIC 128mgmL -1 . It confirms a suitability of f-(TA) GrO for thermally stable antibacterial coating. The f-(TA) GrO showed 39.14-48.9% antioxidant activities, evaluated with 2,2-diphenyl-1-picrylhydrazyl (DPPH) free radical assay. The inherent cytotoxicity of f-(TA) GrO was evaluated with SRB assay to living cells, MCF-7 and Vero. The estimated cell viabilities were >80% upon addition of f-(TA) GrO over a wide concentration range of 10-80μgmL -1 . The high cytocompatibility of f-(TA) GrO confirms the low toxicity and an excellent biocompatibility. The morphological effect on Vero cell line, evidently confirmed the biocompatibility of f-(TA) GrO. Therefore, f-(TA) GrO was emerged as an advanced functional biomaterial for thermal and biomedical applications. Copyright © 2016 Elsevier B.V. All rights reserved.

Probing structurally altered and aggregated states of therapeutically relevant proteins using GroEL coupled to bio-layer interferometry.

PubMed

Naik, Subhashchandra; Kumru, Ozan S; Cullom, Melissa; Telikepalli, Srivalli N; Lindboe, Elizabeth; Roop, Taylor L; Joshi, Sangeeta B; Amin, Divya; Gao, Phillip; Middaugh, C Russell; Volkin, David B; Fisher, Mark T

2014-10-01

The ability of a GroEL-based bio-layer interferometry (BLI) assay to detect structurally altered and/or aggregated species of pharmaceutically relevant proteins is demonstrated. Assay development included optimizing biotinylated-GroEL immobilization to streptavidin biosensors, combined with biophysical and activity measurements showing native and biotinylated GroEL are both stable and active. First, acidic fibroblast growth factor (FGF-1) was incubated under conditions known to promote (40°C) and inhibit (heparin addition) molten globule formation. Heat exposed (40°C) FGF-1 exhibited binding to GroEL-biosensors, which was significantly diminished in the presence of heparin. Second, a polyclonal human IgG solution containing 6-8% non-native dimer showed an increase in higher molecular weight aggregates upon heating by size exclusion chromatography (SEC). The poly IgG solution displayed binding to GroEL-biosensors initially with progressively increased binding upon heating. Enriched preparations of the IgG dimers or monomers showed significant binding to GroEL-biosensors. Finally, a thermally treated IgG1 monoclonal antibody (mAb) solution also demonstrated increased GroEL-biosensor binding, but with different kinetics. The bound complexes could be partially to fully dissociated after ATP addition (i.e., specific GroEL binding) depending on the protein, environmental stress, and the assay's experimental conditions. Transmission electron microscopy (TEM) images of GroEL-mAb complexes, released from the biosensor, also confirmed interaction of bound complexes at the GroEL binding site with heat-stressed mAb. Results indicate that the GroEL-biosensor-BLI method can detect conformationally altered and/or early aggregation states of proteins, and may potentially be useful as a rapid, stability-indicating biosensor assay for monitoring the structural integrity and physical stability of therapeutic protein candidates. © 2014 The Protein Society.

Probing structurally altered and aggregated states of therapeutically relevant proteins using GroEL coupled to bio-layer interferometry

PubMed Central

Naik, Subhashchandra; Kumru, Ozan S; Cullom, Melissa; Telikepalli, Srivalli N; Lindboe, Elizabeth; Roop, Taylor L; Joshi, Sangeeta B; Amin, Divya; Gao, Phillip; Middaugh, C Russell; Volkin, David B; Fisher, Mark T

2014-01-01

The ability of a GroEL-based bio-layer interferometry (BLI) assay to detect structurally altered and/or aggregated species of pharmaceutically relevant proteins is demonstrated. Assay development included optimizing biotinylated-GroEL immobilization to streptavidin biosensors, combined with biophysical and activity measurements showing native and biotinylated GroEL are both stable and active. First, acidic fibroblast growth factor (FGF-1) was incubated under conditions known to promote (40°C) and inhibit (heparin addition) molten globule formation. Heat exposed (40°C) FGF-1 exhibited binding to GroEL-biosensors, which was significantly diminished in the presence of heparin. Second, a polyclonal human IgG solution containing 6–8% non-native dimer showed an increase in higher molecular weight aggregates upon heating by size exclusion chromatography (SEC). The poly IgG solution displayed binding to GroEL-biosensors initially with progressively increased binding upon heating. Enriched preparations of the IgG dimers or monomers showed significant binding to GroEL-biosensors. Finally, a thermally treated IgG1 monoclonal antibody (mAb) solution also demonstrated increased GroEL-biosensor binding, but with different kinetics. The bound complexes could be partially to fully dissociated after ATP addition (i.e., specific GroEL binding) depending on the protein, environmental stress, and the assay’s experimental conditions. Transmission electron microscopy (TEM) images of GroEL-mAb complexes, released from the biosensor, also confirmed interaction of bound complexes at the GroEL binding site with heat-stressed mAb. Results indicate that the GroEL-biosensor-BLI method can detect conformationally altered and/or early aggregation states of proteins, and may potentially be useful as a rapid, stability-indicating biosensor assay for monitoring the structural integrity and physical stability of therapeutic protein candidates. PMID:25043635

A precise determination of black hole spin in GRO J1655-40

NASA Astrophysics Data System (ADS)

Abramowicz, M. A.; Kluźniak, W.

2001-08-01

We note that the recently discovered 450 Hz frequency in the X-ray flux of the black hole candidate GRO J1655-40 is in a 3:2 ratio to the previously known 300 Hz frequency of quasi-periodic oscillations (QPO) in the same source. If the origin of high frequency QPOs in black hole systems is a resonance between orbital and epicyclic motion of accreting matter, as suggested previously, the angular momentum of the black hole can be accurately determined, given its mass. We find that the dimensionless angular momentum is in the range 0.2

Dr. Gerald Fishman Working on the Burst and Transient Source Experiment (BATSE)

NASA Technical Reports Server (NTRS)

1991-01-01

In this photograph, Dr. Gerald Fishman of the Marshall Space Flight Center (MSFC), a principal investigator of the Compton Gamma-Ray Observatory's (GRO's) instrument, the Burst and Transient Source Experiment (BATSE), works on the BATSE detector module. For nearly 9 years, GRO's BATSE, designed and built by MSFC, kept an unblinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of star, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. Because gamma-rays are so powerful, they pass through conventional telescope mirrors. Instead of a mirror, the heart of each BATSE module was a large, flat, transparent crystal that generated a tiny flash of light when struck by a gamma-ray. With an impressive list of discoveries and diverse accomplishments, BATSE could claim to have rewritten astronomy textbooks. Launched aboard the Space Shuttle Orbiter Atlantis during the STS-35 mission in April 1991, the GRO reentered the Earth's atmosphere and ended its successful 9-year mission in June 2000.

Space Science

NASA Image and Video Library

1996-01-01

In this photograph, Dr. Gerald Fishman of the Marshall Space Flight Center (MSFC), a principal investigator of the Compton Gamma-Ray Observatory's (GRO's) instrument, the Burst and Transient Source Experiment (BATSE), and Dr. Chryssa Kouveliotou of Universities Space Research Associates review data from the BATSE. For nearly 9 years, GRO's Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center, kept a blinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of stars, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. Because gamma-rays are so powerful, they pass through conventional telescope mirrors. Instead of a mirror, the heart of each BATSE module was a large, flat, transparent crystal that generated a tiny flash of light when struck by a gamma-ray. With an impressive list of discoveries and diverse accomplishments, BATSE could claim to have rewritten astronomy textbooks. Launched aboard the Space Shuttle Orbiter Atlantis during the STS-35 mission in April 1991, the GRO reentered the Earth's atmosphere and ended its successful 9-year mission in June 2000.

Enhanced butyric acid tolerance and production by Class I heat shock protein-overproducing Clostridium tyrobutyricum ATCC 25755.

PubMed

Suo, Yukai; Luo, Sheng; Zhang, Yanan; Liao, Zhengping; Wang, Jufang

2017-08-01

The response of Clostridium tyrobutyricum to butyric acid stress involves various stress-related genes, and therefore overexpression of stress-related genes can improve butyric acid tolerance and yield. Class I heat shock proteins (HSPs) play an important role in the process of protecting bacteria from sudden changes of extracellular stress by assisting protein folding correctly. The results of quantitative real-time PCR indicated that the Class I HSGs grpE, dnaK, dnaJ, groEL, groES, and htpG were significantly upregulated under butyric acid stress, especially the dnaK and groE operons. Overexpression of groESL and htpG could significantly improve the tolerance of C. tyrobutyricum to butyric acid, while overexpression of dnaK and dnaJ showed negative effects on butyric acid tolerance. Acid production was also significantly promoted by increased GroESL expression levels; the final butyric acid and acetic acid concentrations were 28.2 and 38% higher for C. tyrobutyricum ATCC 25755/groESL than for the wild-type strain. In addition, when fed-batch fermentation was carried out using cell immobilization in a fibrous-bed bioreactor, the butyric acid yield produced by C. tyrobutyricum ATCC 25755/groESL reached 52.2 g/L, much higher than that for the control. The improved butyric acid yield is probably attributable to the high GroES and GroEL levels, which can stabilize the biosynthetic machinery of C. tyrobutyricum under extracellular butyric acid stress.

Properties of the Second Outburst of the Bursting Pulsar (GRO J1744-28) as Observed with BASTE

NASA Technical Reports Server (NTRS)

Woods, Peter M.; Kouveliotou, Chryssa; VanParadus, Jan; Briggs, Michael S.; Wilson, C. A.; Deal, Kim; Harmon, B. A.; Fishman, G. J.; Lewin, W. H. G.; Kommers, J.

1999-01-01

One year after its discovery, the Bursting Pulsar (GRO J1744-28) went into outburst again, displaying the hard X-ray bursts and pulsations that make this source unique. We report on BATSE (Burst and Transient Source Experiment) observations of both the persistent and burst emission for this second outburst and draw comparisons with the first. The second outburst was smaller than the first in both duration and peak luminosity. The persistent flux, burst peak flux, and burst fluence were all reduced in amplitude by a factor of approximately 1.7. Despite these differences, the two outbursts were very similar with respect to the burst occurrence rate, the durations and spectra of bursts, the absence of spectral evolution during bursts, and the evolution of the ratio alpha of average persistent to burst luminosity. Although no spectral evolution was found within individual bursts, we find evidence for a small (20%) variation of the spectral temperature during the course of the second outburst.

The groESL Chaperone Operon of Lactobacillus johnsonii†

PubMed Central

Walker, D. Carey; Girgis, Hany S.; Klaenhammer, Todd R.

1999-01-01

The Lactobacillus johnsonii VPI 11088 groESL operon was localized on the chromosome near the insertion element IS1223. The operon was initially cloned as a series of three overlapping PCR fragments, which were sequenced and used to design primers to amplify the entire operon. The amplified fragment was used as a probe to recover the chromosomal copy of the groESL operon from a partial library of L. johnsonii VPI 11088 (NCK88) DNA, cloned in the shuttle vector pTRKH2. The 2,253-bp groESL fragment contained three putative open reading frames, two of which encoded the ubiquitous GroES and GroEL chaperone proteins. Analysis of the groESL promoter region revealed three transcription initiation sites, as well as three sets of inverted repeats (IR) positioned between the transcription and translation start sites. Two of the three IR sets bore significant homology to the CIRCE elements, implicated in negative regulation of the heat shock response in many bacteria. Northern analysis and primer extension revealed that multiple temperature-sensitive promoters preceded the groESL chaperone operon, suggesting that stress protein production in L. johnsonii is strongly regulated. Maximum groESL transcription activity was observed following a shift to 55°C, and a 15 to 30-min exposure of log-phase cells to this temperature increased the recovery of freeze-thawed L. johnsonii VPI 11088. These results suggest that a brief, preconditioning heat shock can be used to trigger increased chaperone production and provide significant cross-protection from the stresses imposed during the production of frozen culture concentrates. PMID:10388700

The early ultraviolet, optical, and radio evolution of the soft X-ray transient GRO J0422+32

NASA Technical Reports Server (NTRS)

Shrader, C. R.; Wagner, R. Mark; Hjellming, R. M.; Han, X. H.; Starrfield, S. G.

1994-01-01

We have monitored the evolution of the transient X-ray source GRO J0422+32 from approximately 2 weeks postdiscovery into its early decline phase at ultraviolet, optical, and radio wavelengths. Optical and ultraviolet spectra exhibit numerous, but relatively weak, high-excitation emission lines such as those arising from He II, N III, N V, and C IV superposed on an intrinsically blue continuum. High-resolution optical spectroscopy reveals line profiles which are double peaked, and in the case of the higher order Balmer lines, superposed on a broad absorption profile. The early outburst optical-ultraviolet continuum energy distribution is well represented by a two power-law fit with a break at approximately equal 4000 A. Radio observations with the Very Large Array (VLA) reveal a flat-spectrum source, slowly increasing in intensity at the earliest epochs observed, followed by an approximate power-law decay light curve with an index of -1. Light curves for each wavelength domain are presented and discussed. Notable are the multiple secondary outbursts seen in the optical more than 1 year postdiscovery, and spectral changes associated with secondary rises seen in the radio and UV. We find that the ultraviolet and optical characteristics of GRO J0422+32 as well as its radio evolution, are similar to other recent well-observed soft X-ray transients (also called X-ray novae) such as Cen X-4, A0620-00 (V616 Mon), and Nova Muscae 1991 (GS 1124-683), suggesting that GRO J0422+32 is also a member of that subclass of low-mass X-ray binaries. We present definitive astrometric determination of the source position, and place an upper limit of R approximately equals 20 from our analysis of the Palomar Observatory Sky Survey (POSS). Additionally, we derive distinct values for color excess from analysis of the optical (E(B-V) = 0.23) and ultraviolet (E(B-V) = 0.4) data, suggesting an intrinsic magnitude of 19-19.5 for the progenitor if it is mid-K dwarf. This leads to a likely range of 2.4-3.0 kpc for the source distance, which is consistent with our separate estimate of 2.4 +/- 0.4 kpc based on measurement of the NaD interstellar line profile. Adopting 2.4 kpc and E(B-V) = 0.23, the outburst absolute magnitude was M approximately equals 0.0, which is a typical value for this class of objects.

Cloning, expression, and homology modeling of GroEL protein from Leptospira interrogans serovar autumnalis strain N2.

PubMed

Natarajaseenivasan, Kalimuthusamy; Shanmughapriya, Santhanam; Velineni, Sridhar; Artiushin, Sergey C; Timoney, John F

2011-10-01

Leptospirosis is an infectious bacterial disease caused by Leptospira species. In this study, we cloned and sequenced the gene encoding the immunodominant protein GroEL from L. interrogans serovar Autumnalis strain N2, which was isolated from the urine of a patient during an outbreak of leptospirosis in Chennai, India. This groEL gene encodes a protein of 60 kDa with a high degree of homology (99% similarity) to those of other leptospiral serovars. Recombinant GroEL was overexpressed in Escherichia coli. Immunoblot analysis indicated that the sera from confirmed leptospirosis patients showed strong reactivity with the recombinant GroEL while no reactivity was observed with the sera from seronegative control patient. In addition, the 3D structure of GroEL was constructed using chaperonin complex cpn60 from Thermus thermophilus as template and validated. The results indicated a Z-score of -8.35, which is in good agreement with the expected value for a protein. The superposition of the Ca traces of cpn60 structure and predicted structure of leptospiral GroEL indicates good agreement of secondary structure elements with an RMSD value of 1.5 Å. Further study is necessary to evaluate GroEL for serological diagnosis of leptospirosis and for its potential as a vaccine component. Copyright © 2011 Beijing Genomics Institute. Published by Elsevier Ltd. All rights reserved.

Reorganization of Actin Cytoskeleton by the Phosphoinositide Metabolite Glycerophosphoinositol 4-Phosphate

PubMed Central

Mancini, Raffaella; Piccolo, Enza; Mariggio', Stefania; Filippi, Beatrice Maria; Iurisci, Cristiano; Pertile, Paolo; Berrie, Christopher P.; Corda, Daniela

2003-01-01

Glycerophosphoinositol 4-phosphate (GroPIns-4P) is a biologically active, water-soluble phospholipase A metabolite derived from phosphatidylinositol 4-phosphate, whose cellular concentrations have been reported to increase in Ras-transformed cells. It is therefore important to understand its biological activities. Herein, we have examined whether GroPIns-4P can regulate the organization of the actin cytoskeleton, because this could be a Ras-related function involved in cell motility and metastatic invasion. We find that in serum-starved Swiss 3T3 cells, exogenously added GroPIns-4P rapidly and potently induces the formation of membrane ruffles, and, later, the formation of stress fibers. These actin structures can be regulated by the small GTPases Cdc42, Rac, and Rho. To analyze the mechanism of action of GroPIns-4P, we selectively inactivated each of these GTPases. GroPIns-4P requires active Rac and Rho, but not Cdc42, for ruffle and stress fiber formation, respectively. Moreover, GroPIns-4P induces a rapid translocation of the green fluorescent protein-tagged Rac into ruffles, and increases the fraction of GTP-bound Rac, in intact cells. The activation of Rac by GroPIns-4P was near maximal and long-lasting. Interestingly, this feature seems to be critical in the induction of actin ruffles by GroPIns-4P. PMID:12589050

Amplification of the groESL operon in Pseudomonas putida increases siderophore gene promoter activity.

PubMed

Venturi, V; Wolfs, K; Leong, J; Weisbeek, P J

1994-10-17

Pseudobactin 358 is the yellow-green fluorescent siderophore [microbial iron(III) transport agent] produced by Pseudomonas putida WCS358 under iron-limiting conditions. The genes encoding pseudobactin 358 biosynthesis are iron-regulated at the level of transcription. In this study, the molecular characterization is reported of a cosmid clone of WCS358 DNA that can stimulate, in an iron-dependent manner, the activity of a WCS358 siderophore gene promoter in the heterologous Pseudomonas strain A225. The functional region in the clone was identified by subcloning, transposon mutagenesis and DNA sequencing as the groESL operon of strain WCS358. This increase in promoter activity was not observed when the groESL genes of strain WCS358 were integrated via a transposon vector into the genome of Pseudomonas A225, indicating that multiple copies of the operon are necessary for the increase in siderophore gene promoter activity. Amplification of the Escherichia coli and WCS358 groESL genes also increased iron-regulated promoter activity in the parent strain WCS358. The groESL operon codes for the chaperone proteins GroES and GroEL, which are responsible for mediating the folding and assembly of many proteins.

STS-37 Gamma Ray Observatory (GRO) at KSC Payload Hazardous Servicing Fac

NASA Technical Reports Server (NTRS)

1990-01-01

At the Kennedy Space Center (KSC) Payload Hazardous Servicing Facility, the overhead crane lifts the Gamma Ray Observatory (GRO) from its storage container. GRO, one of four NASA Great Observatories, arrived at KSC on 02-06-90 from the California plant of builder TRW. Weighing a massive 34,700 pounds, GRO will be the heaviest payload without an upper stage ever carried aboard the Space Shuttle. It is scheduled for deployment from Atlantis, Orbiter Vehicle (OV) 104, during STS-37.

STS-37 Gamma Ray Observatory (GRO) at KSC Payload Hazardous Servicing Fac

NASA Technical Reports Server (NTRS)

1990-01-01

Kennedy Space Center (KSC) workers at the Payload Hazardous Servicing Facility are removing the Gamma Ray Observatory (GRO) from its storage container. GRO, one of four NASA Great Observatories, arrived at KSC on 02-06-90 from the California plant of builder TRW. Weighing a massive 34,700 pounds, GRO will be the heaviest payload without an upper stage ever carried aboard the Space Shuttle. It is scheduled for deployment from Atlantis, Orbiter Vehicle (OV) 104, during STS-37.

Molecular cloning of the potato Gro1-4 gene conferring resistance to pathotype Ro1 of the root cyst nematode Globodera rostochiensis, based on a candidate gene approach.

PubMed

Paal, Jürgen; Henselewski, Heike; Muth, Jost; Meksem, Khalid; Menéndez, Cristina M; Salamini, Francesco; Ballvora, Agim; Gebhardt, Christiane

2004-04-01

The endoparasitic root cyst nematode Globodera rostochiensis causes considerable damage in potato cultivation. In the past, major genes for nematode resistance have been introgressed from related potato species into cultivars. Elucidating the molecular basis of resistance will contribute to the understanding of nematode-plant interactions and assist in breeding nematode-resistant cultivars. The Gro1 resistance locus to G. rostochiensis on potato chromosome VII co-localized with a resistance-gene-like (RGL) DNA marker. This marker was used to isolate from genomic libraries 15 members of a closely related candidate gene family. Analysis of inheritance, linkage mapping, and sequencing reduced the number of candidate genes to three. Complementation analysis by stable potato transformation showed that the gene Gro1-4 conferred resistance to G. rostochiensis pathotype Ro1. Gro1-4 encodes a protein of 1136 amino acids that contains Toll-interleukin 1 receptor (TIR), nucleotide-binding (NB), leucine-rich repeat (LRR) homology domains and a C-terminal domain with unknown function. The deduced Gro1-4 protein differed by 29 amino acid changes from susceptible members of the Gro1 gene family. Sequence characterization of 13 members of the Gro1 gene family revealed putative regulatory elements and a variable microsatellite in the promoter region, insertion of a retrotransposon-like element in the first intron, and a stop codon in the NB coding region of some genes. Sequence analysis of RT-PCR products showed that Gro1-4 is expressed, among other members of the family including putative pseudogenes, in non-infected roots of nematode-resistant plants. RT-PCR also demonstrated that members of the Gro1 gene family are expressed in most potato tissues.

Gender role orientation is associated with health-related quality of life differently among African-American, Hispanic, and White youth.

PubMed

Scott, Sarah M; Wallander, Jan L; Depaoli, Sarah; Elliott, Marc N; Grunbaum, Jo Anne; Tortolero, Susan R; Cuccaro, Paula M; Schuster, Mark A

2015-09-01

This study examined the association between gender role orientation (GRO) and health-related quality of life (HRQOL) in youth, and how this relationship may differ between males and females as well as among African-American, White, and Hispanic individuals. GRO has been reported to influence serious health outcomes including cancer, heart disease, mental illness, and mortality rates. However, few studies have examined the link between GRO and health outcomes for children, even though gender identity is formed in childhood. Data were examined from 4824 participants in the Healthy Passages™ project, a population-based survey of fifth-grade children in three US metropolitan areas. Children reported their own HRQOL using the PedsQL and degree of female, male, and androgynous GRO using the Children's Sex Role Inventory. Based on structural equations analysis, male GRO was positively associated with HRQOL for all racial/ethnic groups, regardless of sex, whereas female GRO was associated with better HRQOL for Hispanic and White females and poorer HRQOL for Hispanic males. Androgynous GRO was associated with better HRQOL among Hispanic and White females, but not males nor African-Americans of either sex. Racial/ethnic differences emerged for female and androgynous, but not male, GROs. Hispanic males are the only group for which GRO (female) was associated with poorer HRQOL. Future research should find ways to help youth overcome negative effects on health from gender beliefs and behavior patterns with sensitivity to racial/ethnic membership.

On Three-dimensional Structures in Relativistic Hydrodynamic Jets

NASA Astrophysics Data System (ADS)

Hardee, Philip E.

2000-04-01

The appearance of wavelike helical structures on steady relativistic jets is studied using a normal mode analysis of the linearized fluid equations. Helical structures produced by the normal modes scale relative to the resonant (most unstable) wavelength and not with the absolute wavelength. The resonant wavelength of the normal modes can be less than the jet radius even on highly relativistic jets. High-pressure regions helically twisted around the jet beam may be confined close to the jet surface, penetrate deeply into the jet interior, or be confined to the jet interior. The high-pressure regions range from thin and ribbon-like to thick and tubelike depending on the mode and wavelength. The wave speeds can be significantly different at different wavelengths but are less than the flow speed. The highest wave speed for the jets studied has a Lorentz factor somewhat more than half that of the underlying flow speed. A maximum pressure fluctuation criterion found through comparison between theory and a set of relativistic axisymmetric jet simulations is applied to estimate the maximum amplitudes of the helical, elliptical, and triangular normal modes. Transverse velocity fluctuations for these asymmetric modes are up to twice the amplitude of those associated with the axisymmetric pinch mode. The maximum amplitude of jet distortions and the accompanying velocity fluctuations at, for example, the resonant wavelength decreases as the Lorentz factor increases. Long-wavelength helical surface mode and shorter wavelength helical first body mode generated structures should be the most significant. Emission from high-pressure regions as they twist around the jet beam can vary significantly as a result of angular variation in the flow direction associated with normal mode structures if they are viewed at about the beaming angle θ=1/γ. Variation in the Doppler boost factor can lead to brightness asymmetries by factors up to 6 as long-wavelength helical structure produced by the helical surface mode winds around the jet. Higher order surface modes and first body modes produce less variation. Angular variation in the flow direction associated with the helical mode appears consistent with precessing jet models that have been proposed to explain the variability in 3C 273 and BL Lac object AO 0235+164. In particular, cyclic angular variation in the flow direction produced by the normal modes could produce the activity seen in BL Lac object OJ 287. Jet precession provides a mechanism for triggering the helical modes on multiple length scales, e.g., the galactic superluminal GRO J1655-40.

A packet switched communications system for GRO

NASA Astrophysics Data System (ADS)

Husain, Shabu; Yang, Wen-Hsing; Vadlamudi, Rani; Valenti, Joseph

1993-11-01

This paper describes the packet switched Instrumenters Communication System (ICS) that was developed for the Command Management Facility at GSFC to support the Gamma Ray Observatory (GRO) spacecraft. The GRO ICS serves as a vital science data acquisition link to the GRO scientists to initiate commands for their spacecraft instruments. The system is ready to send and receive messages at any time, 24 hours a day and seven days a week. The system is based on X.25 and the International Standard Organization's (ISO) 7-layer Open Systems Interconnection (OSI) protocol model and has client and server components. The components of the GRO ICS are discussed along with how the Communications Subsystem for Interconnection (CSFI) and Network Control Program Packet Switching Interface (NPSI) software are used in the system.

Mycobacterium tuberculosis GroEL2 Modulates Dendritic Cell Responses.

PubMed

Georgieva, Maria; Sia, Jonathan Kevin; Bizzell, Erica; Madan-Lala, Ranjna; Rengarajan, Jyothi

2018-02-01

Mycobacterium tuberculosis successfully subverts the host immune response to promote disease progression. In addition to its known intracellular niche in macrophages, M. tuberculosis interferes with the functions of dendritic cells (DCs), which are the primary antigen-presenting cells of the immune system. We previously showed that M. tuberculosis dampens proinflammatory responses and impairs DC functions through the cell envelope-associated serine protease Hip1. Here we present data showing that M. tuberculosis GroEL2, a substrate of Hip1, modulates DC functions. The full-length GroEL2 protein elicited robust proinflammatory responses from DCs and promoted DC maturation and antigen presentation to T cells. In contrast, the cleaved form of GroEL2, which predominates in M. tuberculosis , was poorly immunostimulatory and was unable to promote DC maturation and antigen presentation. Moreover, DCs exposed to full-length, but not cleaved, GroEL2 induced strong antigen-specific gamma interferon (IFN-γ), interleukin-2 (IL-2), and IL-17A cytokine responses from CD4 + T cells. Moreover, the expression of cleaved GroEL2 in the hip1 mutant restored the robust T cell responses to wild-type levels, suggesting that proteolytic cleavage of GroEL2 allows M. tuberculosis to prevent optimal DC-T cell cross talk during M. tuberculosis infection. Copyright © 2018 American Society for Microbiology.

Inhibitory Effects of Cytosolic Ca(2+) Concentration by Ginsenoside Ro Are Dependent on Phosphorylation of IP3RI and Dephosphorylation of ERK in Human Platelets.

PubMed

Kwon, Hyuk-Woo; Shin, Jung-Hae; Lee, Dong-Ha; Park, Hwa-Jin

2015-01-01

Intracellular Ca(2+) ([Ca(2+)] i ) is platelet aggregation-inducing molecule and is involved in activation of aggregation associated molecules. This study was carried out to understand the Ca(2+)-antagonistic effect of ginsenoside Ro (G-Ro), an oleanane-type saponin in Panax ginseng. G-Ro, without affecting leakage of lactate dehydrogenase, dose-dependently inhibited thrombin-induced platelet aggregation, and the half maximal inhibitory concentration was approximately 155 μM. G-Ro inhibited strongly thrombin-elevated [Ca(2+)] i , which was strongly increased by A-kinase inhibitor Rp-8-Br-cAMPS compared to G-kinase inhibitor Rp-8-Br-cGMPS. G-Ro increased the level of cAMP and subsequently elevated the phosphorylation of inositol 1, 4, 5-triphosphate receptor I (IP3RI) (Ser(1756)) to inhibit [Ca(2+)] i mobilization in thrombin-induced platelet aggregation. Phosphorylation of IP3RI (Ser(1756)) by G-Ro was decreased by PKA inhibitor Rp-8-Br-cAMPS. In addition, G-Ro inhibited thrombin-induced phosphorylation of ERK 2 (42 kDa), indicating inhibition of Ca(2+) influx across plasma membrane. We demonstrate that G-Ro upregulates cAMP-dependent IP3RI (Ser(1756)) phosphorylation and downregulates phosphorylation of ERK 2 (42 kDa) to decrease thrombin-elevated [Ca(2+)] i , which contributes to inhibition of ATP and serotonin release, and p-selectin expression. These results indicate that G-Ro in Panax ginseng is a beneficial novel Ca(2+)-antagonistic compound and may prevent platelet aggregation-mediated thrombotic disease.

Properties of the Second Outburst of the Bursting Pulsar (GRO J1744-28) as Observed with BATSE

NASA Technical Reports Server (NTRS)

Woods, P.; Kouveliotou, C.; vanParadijs, J.; Briggs, M. S.; Wilson, C. A.; Deal, K. J.; Harmon, B. A.; Fishman, G. J.; Lewin, W. H.; Kommers, J.

1998-01-01

One year after its discovery, the Bursting Pulsar (GRO J1744-28) went into outburst again, displaying the hard X-ray bursts and pulsations that make this source unique. We report on Burst and Transient Source Experiment (BATSE) observations of both the persistent and burst emission for this second outburst and draw comparisons to the first. The second outburst was smaller than the first in both duration and peak luminosity. The persistent flux, burst peak flux and burst fluence were all reduced in amplitude by a factor approximately 1.7. Despite these differences, the average burst occurrence rate and average burst durations were roughly the same through each outburst. Similar to the first outburst, no spectral evolution was found within bursts and the parameter alpha was very small at the start of the outburst (alpha = 2.1 +/- 1.7 on 1996 December 2). Although no spectral evolution was found within individual bursts, we find evidence for a small (20%) variation of the spectral temperature during the course of the second outburst.

Application of a relativistic accretion disc model to X-ray spectra of LMC X-1 and GRO J1655-40

NASA Astrophysics Data System (ADS)

Gierliński, Marek; Maciołek-Niedźwiecki, Andrzej; Ebisawa, Ken

2001-08-01

We present a general relativistic accretion disc model and its application to the soft-state X-ray spectra of black hole binaries. The model assumes a flat, optically thick disc around a rotating Kerr black hole. The disc locally radiates away the dissipated energy as a blackbody. Special and general relativistic effects influencing photons emitted by the disc are taken into account. The emerging spectrum, as seen by a distant observer, is parametrized by the black hole mass and spin, the accretion rate, the disc inclination angle and the inner disc radius. We fit the ASCA soft-state X-ray spectra of LMC X-1 and GRO J1655-40 by this model. We find that, having additional limits on the black hole mass and inclination angle from optical/UV observations, we can constrain the black hole spin from X-ray data. In LMC X-1 the constraint is weak, and we can only rule out the maximally rotating black hole. In GRO J1655-40 we can limit the spin much better, and we find 0.68<=a<=0.88. Accretion discs in both sources are radiation-pressure dominated. We do not find Compton reflection features in the spectra of any of these objects.

Growth-related gene product {alpha}: A chemotactic cytokine for neutrophils in rheumatoid arthritis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Koch, A.E.; Pope, R.M.; Shah, M.R.

Leukocyte recruitment is critical in the inflammation seen in rheumatoid arthritis (RA). To determine whether the chemokine growth-related gene product {alpha} (gro{alpha}) plays a role in this process, we examined synovial tissue (ST), synovial fluid (SF), and plasma samples from 102 patients with arthritis. RA SF contained more antigenic gro{alpha} (mean 5.3 {+-} 1.9 ng/ml) than did SFs from either osteoarthritis (OA) or other forms of arthritis (mean 0.1 ng/ml) (p < 0.05). RA plasma contained more gro{alpha} (mean 4.3 {+-} 1.8 ng/ml) than normal plasma (mean 0.1 ng/ml) (p < 0.05). RA ST fibroblasts (1.2 x 10{sup 5}/cells/ml RPMImore » 1640/24 h) produced antigenic gro{alpha} (mean 0.2 {+-} 0.1 ng/ml), and this production was increased significantly upon incubation with TNF-{alpha} (mean 1.3 {+-} 0.3 ng/ml) or IL-1{beta} (mean 2.3 {+-} 0.6 ng/ml) (p < 0.05). Cells from RA SF also produced gro{alpha}: neutrophils (PMNs) (10{sup 7} cells/ml/24 h) produced 3.7 {+-} 0.7 ng/ml. RA SF mononuclear cells produced gro{alpha}, particularly upon incubation with LPS or PHA. Immunoreactive ST gro{alpha} was found in greater numbers of RA compared with either OA or normal lining cells, as well as in RA compared with OA subsynovial macrophages (p < 0.05). IL-8 accounted for a mean of 36% of the RA SF chemotactic activity for PMNs, while epithelial neutrophil-activating peptide-78 accounted for 34%, and gro{alpha} for 28%, of this activity. Combined neutralization of all three chemokines in RA SFs resulted in a mean decrease of 50% of the chemotactic activity for PMNs present in the RA SFs. These results indicate that gro{alpha} plays an important role in the ingress of PMNs into the RA joint. 54 refs., 6 figs., 1 tab.« less

B-Cell Epitopes in GroEL of Francisella tularensis

PubMed Central

Lu, Zhaohua; Rynkiewicz, Michael J.; Madico, Guillermo; Li, Sheng; Yang, Chiou-Ying; Perkins, Hillary M.; Sompuram, Seshi R.; Kodela, Vani; Liu, Tong; Morris, Timothy; Wang, Daphne; Roche, Marly I.; Seaton, Barbara A.; Sharon, Jacqueline

2014-01-01

The chaperonin protein GroEL, also known as heat shock protein 60 (Hsp60), is a prominent antigen in the human and mouse antibody response to the facultative intracellular bacterium Francisella tularensis (Ft), the causative agent of tularemia. In addition to its presumed cytoplasmic location, FtGroEL has been reported to be a potential component of the bacterial surface and to be released from the bacteria. In the current study, 13 IgG2a and one IgG3 mouse monoclonal antibodies (mAbs) specific for FtGroEL were classified into eleven unique groups based on shared VH-VL germline genes, and seven crossblocking profiles revealing at least three non-overlapping epitope areas in competition ELISA. In a mouse model of respiratory tularemia with the highly pathogenic Ft type A strain SchuS4, the Ab64 and N200 IgG2a mAbs, which block each other’s binding to and are sensitive to the same two point mutations in FtGroEL, reduced bacterial burden indicating that they target protective GroEL B-cell epitopes. The Ab64 and N200 epitopes, as well as those of three other mAbs with different crossblocking profiles, Ab53, N3, and N30, were mapped by hydrogen/deuterium exchange–mass spectrometry (DXMS) and visualized on a homology model of FtGroEL. This model was further supported by its experimentally-validated computational docking to the X-ray crystal structures of Ab64 and Ab53 Fabs. The structural analysis and DXMS profiles of the Ab64 and N200 mAbs suggest that their protective effects may be due to induction or stabilization of a conformational change in FtGroEL. PMID:24968190

Toward a detailed description of the pathways of allosteric communication in the GroEL chaperonin through atomistic simulation.

PubMed

Piggot, Thomas J; Sessions, Richard B; Burston, Steven G

2012-02-28

GroEL, along with its coprotein GroES, is essential for ensuring the correct folding of unfolded or newly synthesized proteins in bacteria. GroEL is a complex, allosteric molecule, composed of two heptameric rings stacked back to back, that undergoes large structural changes during its reaction cycle. These structural changes are driven by the cooperative binding and subsequent hydrolysis of ATP, by GroEL. Despite numerous previous studies, the precise mechanisms of allosteric communication and the associated structural changes remain elusive. In this paper, we describe a series of all-atom, unbiased, molecular dynamics simulations over relatively long (50-100 ns) time scales of a single, isolated GroEL subunit and also a heptameric GroEL ring, in the presence and absence of ATP. Combined with results from a distance restraint-biased simulation of the single ring, the atomistic details of the earliest stages of ATP-driven structural changes within this complex molecule are illuminated. Our results are in broad agreement with previous modeling studies of isolated subunits and with a coarse-grained, forcing simulation of the single ring. These are the first reported all-atom simulations of the GroEL single-ring complex and provide a unique insight into the role of charged residues K80, K277, R284, R285, and E388 at the subunit interface in transmission of the allosteric signal. These simulations also demonstrate the feasibility of performing all-atom simulations of very large systems on sufficiently long time scales on typical high performance computing facilities to show the origins of the earliest events in biologically relevant processes.

Quantification of Human Fecal Bifidobacterium Species by Use of Quantitative Real-Time PCR Analysis Targeting the groEL Gene

PubMed Central

Junick, Jana

2012-01-01

Quantitative real-time PCR assays targeting the groEL gene for the specific enumeration of 12 human fecal Bifidobacterium species were developed. The housekeeping gene groEL (HSP60 in eukaryotes) was used as a discriminative marker for the differentiation of Bifidobacterium adolescentis, B. angulatum, B. animalis, B. bifidum, B. breve, B. catenulatum, B. dentium, B. gallicum, B. longum, B. pseudocatenulatum, B. pseudolongum, and B. thermophilum. The bifidobacterial chromosome contains a single copy of the groEL gene, allowing the determination of the cell number by quantification of the groEL copy number. Real-time PCR assays were validated by comparing fecal samples spiked with known numbers of a given Bifidobacterium species. Independent of the Bifidobacterium species tested, the proportion of groEL copies recovered from fecal samples spiked with 5 to 9 log10 cells/g feces was approximately 50%. The quantification limit was 5 to 6 log10 groEL copies/g feces. The interassay variability was less than 10%, and variability between different DNA extractions was less than 23%. The method developed was applied to fecal samples from healthy adults and full-term breast-fed infants. Bifidobacterial diversity in both adults and infants was low, with mostly ≤3 Bifidobacterium species and B. longum frequently detected. The predominant species in infant and adult fecal samples were B. breve and B. adolescentis, respectively. It was possible to distinguish B. catenulatum and B. pseudocatenulatum. We conclude that the groEL gene is a suitable molecular marker for the specific and accurate quantification of human fecal Bifidobacterium species by real-time PCR. PMID:22307308

GRO J1655-40: Early Stages of the 2005 Outburst

NASA Technical Reports Server (NTRS)

Shaposhnikov, N.; Swank, Jean; Shrader, C. R.; Rupen, M.; Beckmann, V.; Markwardt, C. B.; Smith, D. A.

2007-01-01

The black-hole X-ray binary transient GRO J1655-40 underwent an outburst beginning in early 2005. We present the results of our multi-wavelength observational campaign to study the early outburst spectral and temporal evolution, which combines data from X-ray (RXTE, INTEGRAL), radio (VLA) and optical (ROTSE, SMARTS) instruments. During the reported period the source left quiescence and went through four major accreting black hole states: low-hard, hard intermediate, soft intermediate and high-soft. We investigated dipping behavior in the RXTE band and compare our results to the 1996-1997 case, when the source was predominantly in the high-soft state, finding significant differences. We consider the evolution of the low frequency quasi-periodic oscillations and find that the frequency strongly correlates with the spectral characteristics, before shutting off prior to the transition to the high-soft state. We model the broad-band high-energy spectrum in the context of empirical models, as well as more physically motivated thermal and bulk-motion Comptonization and Compton reflection models. RXTE and INTEGRAL data together support a statistically significant high energy cut-off in the energy spectrum at approximately equal to 100 - 200 keV during the low-hard state. The RXTE data alone also show it very significantly during the transition, but cannot see one in the high-soft state spectra. We consider radio, optical and X-ray connections in the context of possible synchrotron and synchrotron self-Compton origins of X-ray emission in low-hard and intermediate states. In this outburst of GRO J1655-40, the radio flux does not rise strongly with the X-ray flux.

ATP hydrolysis is critical for induction of conformational changes in GroEL that expose hydrophobic surfaces.

PubMed

Gorovits, B M; Ybarra, J; Horowitz, P M

1997-03-14

The degree of hydrophobic exposure in the molecular chaperone GroEL during its cycle of ATP hydrolysis was analyzed using 1,1'-bis(4-anilino)naphthalene-5,5'disulfonic acid (bisANS), a hydrophobic probe, whose fluorescence is highly sensitive to the environment. In the presence of 10 mM MgCl2 and 10 mM KCl the addition of ATP, but not ADP or AMP-PNP, resulted in a time-dependent, linear increase in the bisANS fluorescence. The rate of the increase in the bisANS fluorescence depended on the concentrations of both GroEL and the probe. The effect could be substantially inhibited by addition of excess ADP or by converting ATP to ADP using hexokinase, showing that the increase in the bisANS fluorescence was correlated with ATP hydrolysis. The rate of ATP hydrolysis catalyzed by GroEL was uncompetitively inhibited in the presence of bisANS. This uncompetitive inhibition suggests that the probe can interact with the GroEL-ATP complex. The inability of the nonhydrolyzable ATP analog, AMP-PNP, to cause a similar effect is explained by the interaction of bisANS with a transient conformational state of GroEL formed consequent to ATP hydrolysis. It is suggested that this short lived hydrophobic exposure reflects a conformational shift in GroEL that results from electrostatic repulsion between the bound products of ATP hydrolysis, and it plays an important role in the mechanism of the chaperonin cycle.

Mycobacterium tuberculosis Hip1 modulates macrophage responses through proteolysis of GroEL2.

PubMed

Naffin-Olivos, Jacqueline L; Georgieva, Maria; Goldfarb, Nathan; Madan-Lala, Ranjna; Dong, Lauren; Bizzell, Erica; Valinetz, Ethan; Brandt, Gabriel S; Yu, Sarah; Shabashvili, Daniil E; Ringe, Dagmar; Dunn, Ben M; Petsko, Gregory A; Rengarajan, Jyothi

2014-05-01

Mycobacterium tuberculosis (Mtb) employs multiple strategies to evade host immune responses and persist within macrophages. We have previously shown that the cell envelope-associated Mtb serine hydrolase, Hip1, prevents robust macrophage activation and dampens host pro-inflammatory responses, allowing Mtb to delay immune detection and accelerate disease progression. We now provide key mechanistic insights into the molecular and biochemical basis of Hip1 function. We establish that Hip1 is a serine protease with activity against protein and peptide substrates. Further, we show that the Mtb GroEL2 protein is a direct substrate of Hip1 protease activity. Cleavage of GroEL2 is specifically inhibited by serine protease inhibitors. We mapped the cleavage site within the N-terminus of GroEL2 and confirmed that this site is required for proteolysis of GroEL2 during Mtb growth. Interestingly, we discovered that Hip1-mediated cleavage of GroEL2 converts the protein from a multimeric to a monomeric form. Moreover, ectopic expression of cleaved GroEL2 monomers into the hip1 mutant complemented the hyperinflammatory phenotype of the hip1 mutant and restored wild type levels of cytokine responses in infected macrophages. Our studies point to Hip1-dependent proteolysis as a novel regulatory mechanism that helps Mtb respond rapidly to changing host immune environments during infection. These findings position Hip1 as an attractive target for inhibition for developing immunomodulatory therapeutics against Mtb.

Mycobacterium tuberculosis Hip1 Modulates Macrophage Responses through Proteolysis of GroEL2

PubMed Central

Madan-Lala, Ranjna; Dong, Lauren; Bizzell, Erica; Valinetz, Ethan; Brandt, Gabriel S.; Yu, Sarah; Shabashvili, Daniil E.; Ringe, Dagmar; Dunn, Ben M.; Petsko, Gregory A.; Rengarajan, Jyothi

2014-01-01

Mycobacterium tuberculosis (Mtb) employs multiple strategies to evade host immune responses and persist within macrophages. We have previously shown that the cell envelope-associated Mtb serine hydrolase, Hip1, prevents robust macrophage activation and dampens host pro-inflammatory responses, allowing Mtb to delay immune detection and accelerate disease progression. We now provide key mechanistic insights into the molecular and biochemical basis of Hip1 function. We establish that Hip1 is a serine protease with activity against protein and peptide substrates. Further, we show that the Mtb GroEL2 protein is a direct substrate of Hip1 protease activity. Cleavage of GroEL2 is specifically inhibited by serine protease inhibitors. We mapped the cleavage site within the N-terminus of GroEL2 and confirmed that this site is required for proteolysis of GroEL2 during Mtb growth. Interestingly, we discovered that Hip1-mediated cleavage of GroEL2 converts the protein from a multimeric to a monomeric form. Moreover, ectopic expression of cleaved GroEL2 monomers into the hip1 mutant complemented the hyperinflammatory phenotype of the hip1 mutant and restored wild type levels of cytokine responses in infected macrophages. Our studies point to Hip1-dependent proteolysis as a novel regulatory mechanism that helps Mtb respond rapidly to changing host immune environments during infection. These findings position Hip1 as an attractive target for inhibition for developing immunomodulatory therapeutics against Mtb. PMID:24830429

The Bursting Pulsar GRO J1744-28: the slowest transitional pulsar?

NASA Astrophysics Data System (ADS)

Court, J. M. C.; Altamirano, D.; Sanna, A.

2018-06-01

GRO J1744-28 (the Bursting Pulsar) is a neutron star low-mass X-ray binary which shows highly structured X-ray variability near the end of its X-ray outbursts. In this letter we show that this variability is analogous to that seen in Transitional Millisecond Pulsars such as PSR J1023+0038: `missing link' systems consisting of a pulsar nearing the end of its recycling phase. As such, we show that the Bursting Pulsar may also be associated with this class of objects. We discuss the implications of this scenario; in particular, we discuss the fact that the Bursting Pulsar has a significantly higher spin period and magnetic field than any other known transitional pulsar. If the Bursting Pulsar is indeed transitional, then this source opens a new window of opportunity to test our understanding of these systems in an entirely unexplored physical regime.

The Bursting Pulsar GRO J1744-28: the Slowest Transitional Pulsar?

NASA Astrophysics Data System (ADS)

Court, J. M. C.; Altamirano, D.; Sanna, A.

2018-04-01

GRO J1744-28 (the Bursting Pulsar) is a neutron star LMXB which shows highly structured X-ray variability near the end of its X-ray outbursts. In this letter we show that this variability is analogous to that seen in Transitional Millisecond Pulsars such as PSR J1023+0038: `missing link' systems consisting of a pulsar nearing the end of its recycling phase. As such, we show that the Bursting Pulsar may also be associated with this class of objects. We discuss the implications of this scenario; in particular, we discuss the fact that the Bursting Pulsar has a significantly higher spin period and magnetic field than any other known Transitional Pulsar. If the Bursting Pulsar is indeed transitional, then this source opens a new window of oppurtunity to test our understanding of these systems in an entirely unexplored physical regime.

An Annotation Agnostic Algorithm for Detecting Nascent RNA Transcripts in GRO-Seq.

PubMed

Azofeifa, Joseph G; Allen, Mary A; Lladser, Manuel E; Dowell, Robin D

2017-01-01

We present a fast and simple algorithm to detect nascent RNA transcription in global nuclear run-on sequencing (GRO-seq). GRO-seq is a relatively new protocol that captures nascent transcripts from actively engaged polymerase, providing a direct read-out on bona fide transcription. Most traditional assays, such as RNA-seq, measure steady state RNA levels which are affected by transcription, post-transcriptional processing, and RNA stability. GRO-seq data, however, presents unique analysis challenges that are only beginning to be addressed. Here, we describe a new algorithm, Fast Read Stitcher (FStitch), that takes advantage of two popular machine-learning techniques, hidden Markov models and logistic regression, to classify which regions of the genome are transcribed. Given a small user-defined training set, our algorithm is accurate, robust to varying read depth, annotation agnostic, and fast. Analysis of GRO-seq data without a priori need for annotation uncovers surprising new insights into several aspects of the transcription process.

Acceleration through passive destabilization: protein folding in a weak hydrophobic environment

NASA Astrophysics Data System (ADS)

Jewett, Andrew; Baumketner, Andrij; Shea, Joan-Emma

2004-03-01

The GroEL chaperonin is a biomolecule which assists the folding of an extremely diverse range of proteins in Eubacteria. Some proteins undergo many rounds of ATP-regulated binding and dissociation from GroEL/ES before folding. It has been proposed that transient stress from ATP-regulated binding and release from GroEL/ES frees frustrated proteins from misfolded conformations. However recent evidence suggests that chaperonin-accelerated protein folding can take place entirely within a mutated GroEL+ES cavity that is unable to open and release the protein. Using molecular dynamics, we demonstrate that static confinement within a weakly hydrophobic (attractive) cavity (similar to the interior of the cavity formed by the GroEL+ES complex) is sufficient to significantly accelerate the folding of a highly frustrated protein-like heteropolymer. Our frustrated molecule benifits kinetically from a static hydrophobic environment that destabilizes misfolded conformations. This may shed light on the mechanisms used by other chaperones which do not depend on ATP.

Capabilities of GRO/OSSE for observing solar flares

NASA Technical Reports Server (NTRS)

Kurfess, J. D.; Johnson, W. N.; Share, G. H.; Hulburt, E. O.; Matz, S. M.; Murphy, R. J.

1989-01-01

The launch of the Gamma Ray Observatory (GRO) near solar maximum makes solar flare studies early in the mission particularly advantageous. The Oriented Scintillation Spectrometer Experiment (OSSE) on GRO, covering the energy range 0.05 to 150 MeV, has some significant advantages over the previous generation of satellite-borne gamma-ray detectors for solar observations. The OSSE detectors will have about 10 times the effective area of the Gamma-Ray Spectrometer (GRS) on Solar Maximum Mission (SMM) for both photons and high-energy neutrons. The OSSE also has the added capability of distinguishing between high-energy neutrons and photons directly. The OSSE spectral accumulation time (approx. 4s) is four times faster than that of the SMM/GRS; much better time resolution is available in selected energy ranges. These characteristics will allow the investigation of particle acceleration in flares based on the evolution of the continuum and nuclear line components of flare spectra, nuclear emission in small flares, the anisotropy of continuum emission in small flares, and the relative intensities of different nuclear lines. The OSSE observational program will be devoted primarily to non-solar sources. Therefore, solar observations require planning and special configurations. The instrumental and operational characteristics of OSSE are discussed in the context of undertaking solar observations. The opportunities for guest investigators to participate in solar flare studies with OSSE is also presented.

Space Science

NASA Image and Video Library

1991-01-01

In this photograph, Dr. Gerald Fishman of the Marshall Space Flight Center (MSFC), a principal investigator of the Compton Gamma-Ray Observatory's (GRO's) instrument, the Burst and Transient Source Experiment (BATSE), works on the BATSE detector module. For nearly 9 years, GRO's BATSE, designed and built by MSFC, kept an unblinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of star, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. Because gamma-rays are so powerful, they pass through conventional telescope mirrors. Instead of a mirror, the heart of each BATSE module was a large, flat, transparent crystal that generated a tiny flash of light when struck by a gamma-ray. With an impressive list of discoveries and diverse accomplishments, BATSE could claim to have rewritten astronomy textbooks. Launched aboard the Space Shuttle Orbiter Atlantis during the STS-35 mission in April 1991, the GRO reentered the Earth's atmosphere and ended its successful 9-year mission in June 2000.

Folding and unfolding pathway of chaperonin GroEL monomer and elucidation of thermodynamic parameters.

PubMed

Puri, Sarita; Chaudhuri, Tapan K

2017-03-01

The conformation and thermodynamic stability of monomeric GroEL were studied by CD and fluorescence spectroscopy. GroEL denaturation with urea and dilution in buffer leads to formation of a folded GroEL monomer. The monomeric nature of this protein was verified by size-exclusion chromatography and native PAGE. It has a well-defined secondary and tertiary structure, folding activity (prevention of aggregation) for substrate protein and is resistant to proteolysis. Being a properly folded and reversibly refoldable, monomeric GroEL is amenable for the study of thermodynamic stability by unfolding transition methods. We present the equilibrium unfolding of monomeric GroEL as studied by urea and heat mediated unfolding processes. The urea mediated unfolding shows two transitions and a single transition in the heat mediated unfolding process. In the case of thermal unfolding, some residual structure unfolds at a higher temperature (70-75°C). The process of folding/unfolding is reversible in both cases. Analysis of folding/unfolding data provides a measure of ΔG NU H 2 O , T m , ΔH van and ΔS van of monomeric GroEL. The thermodynamic stability parameter ΔG NU H 2 O is similar with both CD and intrinsic fluorescence i.e. 7.10±1.0kcal/mol. The calculated T m , ΔH van and ΔS van from the thermal unfolding transition is 46±0.5°C, 43.3±0.1kcal/mol and 143.9±0.1cal/mol/k respectively. Copyright © 2016 Elsevier B.V. All rights reserved.

Gamma rays from hidden millisecond pulsars

NASA Technical Reports Server (NTRS)

Tavani, Marco

1992-01-01

The properties were studied of a new class of gamma ray sources consisting of millisecond pulsars totally or partially surrounded by evaporating material from irradiated companion stars. Hidden millisecond pulsars offer a unique possibility to study gamma ray, optical and radio emission from vaporizing binaries. The relevance of this class of binaries for GRO observations and interpretation of COS-B data is emphasized.

Discrimination of Pathogenic vs. Nonpathogenic Francisella tularensis and Burkholderia pseudomallei Using Proteomics Mass Spectrometry

DTIC Science & Technology

2011-03-01

GroEL AhpC/TSA family protein hypothetical protein FTL0617 heat shock protein DnaK succinyl-CoA synthetase subunit beta hypothetical protein...lipoprotein chaperonin GroEL co-chaperonin GroES DNA-directed RNA polymerase subunit beta intracellular growth locus, subunit C 3.2 Differentiation...thailandensis E264 Unique Proteins Whole Cell Lysates OMPs putative lipoprotein glucan 1,4-a-glucosidase glycosy hydrolase family protein putative

Source Term Model for Steady Micro Jets in a Navier-Stokes Computer Code

NASA Technical Reports Server (NTRS)

Waithe, Kenrick A.

2005-01-01

A source term model for steady micro jets was implemented into a non-proprietary Navier-Stokes computer code, OVERFLOW. The source term models the mass flow and momentum created by a steady blowing micro jet. The model is obtained by adding the momentum and mass flow created by the jet to the Navier-Stokes equations. The model was tested by comparing with data from numerical simulations of a single, steady micro jet on a flat plate in two and three dimensions. The source term model predicted the velocity distribution well compared to the two-dimensional plate using a steady mass flow boundary condition, which was used to simulate a steady micro jet. The model was also compared to two three-dimensional flat plate cases using a steady mass flow boundary condition to simulate a steady micro jet. The three-dimensional comparison included a case with a grid generated to capture the circular shape of the jet and a case without a grid generated for the micro jet. The case without the jet grid mimics the application of the source term. The source term model compared well with both of the three-dimensional cases. Comparisons of velocity distribution were made before and after the jet and Mach and vorticity contours were examined. The source term model allows a researcher to quickly investigate different locations of individual or several steady micro jets. The researcher is able to conduct a preliminary investigation with minimal grid generation and computational time.

A New Player in the Biorefineries Field: Phasin PhaP Enhances Tolerance to Solvents and Boosts Ethanol and 1,3-Propanediol Synthesis in Escherichia coli.

PubMed

Mezzina, Mariela P; Álvarez, Daniela S; Egoburo, Diego E; Díaz Peña, Rocío; Nikel, Pablo I; Pettinari, M Julia

2017-07-15

The microbial production of biofuels and other added-value chemicals is often limited by the intrinsic toxicity of these compounds. The phasin PhaP from the soil bacterium Azotobacter sp. strain FA8 is a polyhydroxyalkanoate granule-associated protein that protects recombinant Escherichia coli against several kinds of stress. PhaP enhances growth and poly(3-hydroxybutyrate) synthesis in polymer-producing recombinant strains and reduces the formation of inclusion bodies during overproduction of heterologous proteins. In this work, the heterologous expression of this phasin in E. coli was used as a strategy to increase tolerance to several biotechnologically relevant chemicals. PhaP was observed to enhance bacterial fitness in the presence of biofuels, such as ethanol and butanol, and other chemicals, such as 1,3-propanediol. The effect of PhaP was also studied in a groELS mutant strain, in which both GroELS and PhaP were observed to exert a beneficial effect that varied depending on the chemical tested. Lastly, the potential of PhaP and GroEL to enhance the accumulation of ethanol or 1,3-propanediol was analyzed in recombinant E. coli Strains that overexpressed either groEL or phaP had increased growth, reflected in a higher final biomass and product titer than the control strain. Taken together, these results add a novel application to the already multifaceted phasin protein group, suggesting that expression of these proteins or other chaperones can be used to improve the production of biofuels and other chemicals. IMPORTANCE This work has both basic and applied aspects. Our results demonstrate that a phasin with chaperone-like properties can increase bacterial tolerance to several biochemicals, providing further evidence of the diverse properties of these proteins. Additionally, both the PhaP phasin and the well-known chaperone GroEL were used to increase the biosynthesis of the biotechnologically relevant compounds ethanol and 1,3-propanediol in recombinant E. coli These findings open the road for the use of these proteins for the manipulation of bacterial strains to optimize the synthesis of diverse bioproducts from renewable carbon sources. Copyright © 2017 American Society for Microbiology.

Kiloparsec Jet Properties of Hybrid, Low-, and High-Synchrotron-Peaked Blazars

NASA Astrophysics Data System (ADS)

Stanley, Ethan C.

Blazars are a rare class of active galactic nucleus (AGN) with relativistic jets closely aligned with the line of sight. Many aspects of the environments and kiloparsec-scale jet structure are not fully understood. Hybrid and high synchrotron peaked (HSP) blazars are two types of blazar that provide unique opportunities to study these jets. Hybrid blazars appear to have jets of differing morphology on each side of their core, suggesting that external factors shape their jet morphology. Three hybrid sources were investigated in radio, optical, and X-ray wavelengths: 8C 1849+670, PKS 2216-038, and PKS 1045-188. For all three, X-ray emission was detected only from the approaching jet. All three had jet radio flux densities and emission mechanisms similar to higher-power FR II sources, but two had approaching jets similar to lower-power FR I sources. None of the three showed definitive signs of asymmetry in their external environments. These results agree with previous multiwavelength studies of hybrid sources that show a dominance of FR I approaching jets and FR II emission mechanisms. With the addition of these three hybrid sources, 13 have been studied in total. Eleven have FR I approaching jets, and eight of those have FR II emission mechanisms. These trends may be due to small number statistics, or they may indicate other factors are creating hybrid-like appearances. High synchrotron peaked blazars are defined by the frequency of the peak of their jet synchrotron emission. Some have shown extreme variability which would imply incredibly-powerful and well-aligned jets, but VLBA observations have measured only modest jet speeds. A radio survey was performed to measure the extended radio luminosity of a large sample of HSP sources. These sources were compared to the complete radio flux density limited MOJAVE 1.5 Jy sample. Flat spectrum radio quasars (FSRQs) showed significant overlap with low synchrotron peaked (LSP) BL Lacs in multiple parameters, which may suggest that many FSRQs are "masquerading'' as LSP BL Lacs. HSP BL Lacs showed slightly lower extended radio luminosities and significantly lower maximum apparent jet speeds, suggesting that they are intrinsically weaker sources. There was a good correlation between maximum apparent jet speed and extended radio luminosity, which supports using the extended radio luminosity as a measure of intrinsic jet power. There was a lack of TeV-detected sources with higher extended radio luminosities, which suggests TeV emission may favor low power jets or high synchrotron peak frequencies. The apparent low power of HSP sources and TeV-detected sources questions any model of TeV emission and variability that depends on the jet (or a part of it) being intrinsically powerful.

Modulating the Effects of the Bacterial Chaperonin GroEL on Fibrillogenic Polypeptides through Modification of Domain Hinge Architecture.

PubMed

Fukui, Naoya; Araki, Kiho; Hongo, Kunihiro; Mizobata, Tomohiro; Kawata, Yasushi

2016-11-25

The isolated apical domain of the Escherichia coli GroEL subunit displays the ability to suppress the irreversible fibrillation of numerous amyloid-forming polypeptides. In previous experiments, we have shown that mutating Gly-192 (located at hinge II that connects the apical domain and the intermediate domain) to a tryptophan results in an inactive chaperonin whose apical domain is disoriented. In this study, we have utilized this disruptive effect of Gly-192 mutation to our advantage, by substituting this residue with amino acid residues of varying van der Waals volumes with the intent to modulate the affinity of GroEL toward fibrillogenic peptides. The affinities of GroEL toward fibrillogenic polypeptides such as Aβ(1-40) (amyloid-β(1-40)) peptide and α-synuclein increased in accordance to the larger van der Waals volume of the substituent amino acid side chain in the G192X mutants. When we compared the effects of wild-type GroEL and selected GroEL G192X mutants on α-synuclein fibril formation, we found that the effects of the chaperonin on α-synuclein fibrillation were different; the wild-type chaperonin caused changes in both the initial lag phase and the rate of fibril extension, whereas the effects of the G192X mutants were more specific toward the nucleus-forming lag phase. The chaperonins also displayed differential effects on α-synuclein fibril morphology, suggesting that through mutation of Gly-192, we may induce changes to the intermolecular affinities between GroEL and α-synuclein, leading to more efficient fibril suppression, and in specific cases, modulation of fibril morphology. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Bacterial rep- mutations that block development of small DNA bacteriophages late in infection.

PubMed Central

Tessman, E S; Peterson, P K

1976-01-01

Several related mutants of Escherichia coli C have been isolated that block the growth of the small icosahedral DNA phages phiX174 and S13 late in infection. Phage G6 is also blocked, at a stage not yet known. Growth of the filamentous phage M13, though not blocked, is affected in these strains. These host mutations co-transduce with ilv at high frequency, as do rep- mutations. However, the new mutants, designated groL-, differ from previously studied rep- mutants in that they permit synthesis of progeny replicative-form DNA. The groL- mutants are blocked in synthesis of stable single-stranded DNA of phiX174 and related phages. They are gro+ for P2. Evidence that groL- mutations and rep- mutations are in the same gene is presented. Spontaneous mutants (ogr) of phiX174, S13, and the G phages can grow on groL- strains. The ogr mutations are located in the phage's major capsid gene, F, as determined by complementation tests. There are numerous sites for mutation to ogr. Some mutations in genes A and F interfere with the ogr property when combined with an ogr mutation on the same genome. The ogr mutations are cis acting in a groL- cell; i.e., an ogr mutant gives very poor rescue of a non-ogr mutant. The wild-type form of each G phage appears to be naturally in the ogr mutant state for one or more groL- strains. It is suggested that a complex between F and rep proteins is involved in phage maturation. The A protein appears to interact with this complex. PMID:789914

Gamma Ray Observatory (GRO) dynamics simulator requirements and mathematical specifications, revision 1

NASA Technical Reports Server (NTRS)

Harman, R.; Blejer, D.

1990-01-01

The requirements and mathematical specifications for the Gamma Ray Observatory (GRO) Dynamics Simulator are presented. The complete simulator system, which consists of the profie subsystem, simulation control and input/output subsystem, truth model subsystem, onboard computer model subsystem, and postprocessor, is described. The simulator will be used to evaluate and test the attitude determination and control models to be used on board GRO under conditions that simulate the expected in-flight environment.

Non-structural proteins P17 and P33 are involved in the assembly of the internal membrane-containing virus PRD1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Karttunen, Jenni; Mäntynen, Sari; Ihalainen, Teemu O.

2015-08-15

Bacteriophage PRD1, which has been studied intensively at the structural and functional levels, still has some gene products with unknown functions and certain aspects of the PRD1 assembly process have remained unsolved. In this study, we demonstrate that the phage-encoded non-structural proteins P17 and P33, either individually or together, complement the defect in a temperature-sensitive GroES mutant of Escherichia coli for host growth and PRD1 propagation. Confocal microscopy of fluorescent fusion proteins revealed co-localisation between P33 and P17 as well as between P33 and the host chaperonin GroEL. A fluorescence recovery after photobleaching assay demonstrated that the diffusion of themore » P33 fluorescent fusion protein was substantially slower in E. coli than theoretically calculated, presumably resulting from intermolecular interactions. Our results indicate that P33 and P17 function in procapsid assembly, possibly in association with the host chaperonin complex GroEL/GroES. - Highlights: • Two non-structural proteins of PRD1 are involved in the virus assembly. • P17 and P33 complement the defect in GroES of Escherichia coli. • P33 co-localises with GroEL and P17 in the bacterium. • Slow motion of P33 in the bacterium suggests association with cellular components.« less

Detection of the host immune response to Burkholderia mallei heat-shock proteins GroEL and DnaK in a glanders patient and infected mice.

PubMed

Amemiya, Kei; Meyers, Jennifer L; Deshazer, David; Riggins, Renaldo N; Halasohoris, Stephanie; England, Marilyn; Ribot, Wilson; Norris, Sarah L; Waag, David M

2007-10-01

We examined, by enzyme-linked immunosorbent assay and Western blot analysis, the host immune response to 2 heat-shock proteins (hsps) in a patient and mice previously infected with Burkholderia mallei. The patient was the first reported human glanders case in 50 years in the United States. The expression of the groEL and dnaK operons appeared to be dependent upon a sigma(32) RNA polymerase as suggested by conserved heat-shock promoter sequences, and the groESL operon may be negatively regulated by a controlling invert repeat of chaperone expression (CIRCE) site. In the antisera, the GroEL protein was found to be more immunoreactive than the DnaK protein in both a human patient and mice previously infected with B. mallei. Examination of the supernatant of a growing culture of B. mallei showed that more GroEL protein than DnaK protein was released from the cell. This may occur similarly within an infected host causing an elevated host immune response to the B. mallei hsps.

PAMAM dendrimers and graphene: materials for removing aromatic contaminants from water.

PubMed

DeFever, Ryan S; Geitner, Nicholas K; Bhattacharya, Priyanka; Ding, Feng; Ke, Pu Chun; Sarupria, Sapna

2015-04-07

We present results from experiments and atomistic molecular dynamics simulations on the remediation of naphthalene by polyamidoamine (PAMAM) dendrimers and graphene oxide (GrO). Specifically, we investigate 3rd-6th generation (G3-G6) PAMAM dendrimers and GrO with different levels of oxidation. The work is motivated by the potential applications of these emerging nanomaterials in removing polycyclic aromatic hydrocarbon contaminants from water. Our experimental results indicate that GrO outperforms dendrimers in removing naphthalene from water. Molecular dynamics simulations suggest that the prominent factors driving naphthalene association to these seemingly disparate materials are similar. Interestingly, we find that cooperative interactions between the naphthalene molecules play a significant role in enhancing their association to the dendrimers and GrO. Our findings highlight that while selection of appropriate materials is important, the interactions between the contaminants themselves can also be important in governing the effectiveness of a given material. The combined use of experiments and molecular dynamics simulations allows us to comment on the possible factors resulting in better performance of GrO in removing polyaromatic contaminants from water.

Measuring implicit gender-role orientation: the gender initial preference task.

PubMed

Stieger, Stefan; Burger, Christoph; Schiller, Franziska R; Schulze, Esther K; Voracek, Martin

2014-01-01

Individuals prefer their name letters over nonname letters, which is known as the name-letter effect (NLE). This research aimed to examine a possible NLE for gender-role orientation (GRO) by rating letters for their gender-typicality in an initial preference task (Gender-IPT). Indeed, a clear NLE appeared: Men rated their initials as more male-typical, whereas women rated them as more female-typical. The Gender-IPT showed good convergent validity with other direct and indirect (Gender Implicit Association Test) measures of GRO as well as predictive validity with sensation seeking and gender-typical everyday life behaviors. The Gender-IPT seems to be a useful and practical indirect measure to assess GRO in a short, convenient, and computer-independent way, complementing other indirect measures of GRO.

Overexpression of heat shock GroEL stress protein in leptospiral biofilm.

PubMed

Vinod Kumar, K; Lall, Chandan; Vimal Raj, R; Vedhagiri, K; Kartick, C; Surya, P; Natarajaseenivasan, K; Vijayachari, P

2017-01-01

Leptospira is the causative agent of leptospirosis, which is an emerging zoonotic disease. Recent studies on Leptospira have demonstrated biofilm formation on abiotic surfaces. The protein expressed in the biofilm was investigated by using SDS-PAGE and immunoblotting in combination with MALDI-TOF mass spectrometry. The proteins expressed in Leptospira biofilm and planktonic cells was analyzed and compared. Among these proteins, one (60 kDa) was found to overexpress in biofilm as compared to the planktonic cells. MALDI-TOF analysis identified this protein as stress and heat shock chaperone GroEL. Our findings demonstrate that GroEL is associated with Leptospira biofilm. GroEL is conserved, highly immunogenic and a prominent stress response protein in pathogenic Leptospira spp., which may have clinical relevance. Copyright © 2016 Elsevier Ltd. All rights reserved.

Greater Research Opportunities (GRO) Undergraduate Fellowships

EPA Pesticide Factsheets

By enhancing and supporting quality environmental education for undergraduate students, the GRO supported fellows have provided new environmental research in the physical, biological, health, and social sciences as well as in engineering.

EGRET/COMPTEL Observations of an Unusual, Steep-Spectrum Gamma-Ray Source

NASA Technical Reports Server (NTRS)

Thompson, D. J.; Bertsch, D. L.; Hartman, R. C.; Collmar, W.; Johnson, W. N.

1999-01-01

During analysis of sources below the threshold of the third EGRET catalog, we have discovered a source, named GRO J1400-3956 based on the best position, with a remarkably steep spectrum. Archival analysis of COMPTEL data shows that the spectrum must have a strong turn-over in the energy range between COMPTEL and EGRET. The EGRET data show some evidence of time variability, suggesting an AGN, but the spectral change of slope is larger than that seen for most gamma-ray blazars. The sharp cutoff resembles the high-energy spectral breaks seen in some gamma-ray pulsars. There have as yet been no OSSE observations of this source.

n/a

NASA Image and Video Library

1991-04-01

This photograph shows the Compton Gamma-Ray Observatory (GRO) being deployed by the Remote Manipulator System (RMS) arm aboard the Space Shuttle Atlantis during the STS-37 mission in April 1991. The GRO reentered Earth atmosphere and ended its successful mission in June 2000. For nearly 9 years, the GRO Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center (MSFC), kept an unblinking watch on the universe to alert scientists to the invisible, mysterious gamma-ray bursts that had puzzled them for decades. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of stars, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. In January 1999, the instrument, via the Internet, cued a computer-controlled telescope at Las Alamos National Laboratory in Los Alamos, New Mexico, within 20 seconds of registering a burst. With this capability, the gamma-ray experiment came to serve as a gamma-ray burst alert for the Hubble Space Telescope, the Chandra X-Ray Observatory, and major gound-based observatories around the world. Thirty-seven universities, observatories, and NASA centers in 19 states, and 11 more institutions in Europe and Russia, participated in the BATSE science program.

Gro2mat: a package to efficiently read gromacs output in MATLAB.

PubMed

Dien, Hung; Deane, Charlotte M; Knapp, Bernhard

2014-07-30

Molecular dynamics (MD) simulations are a state-of-the-art computational method used to investigate molecular interactions at atomic scale. Interaction processes out of experimental reach can be monitored using MD software, such as Gromacs. Here, we present the gro2mat package that allows fast and easy access to Gromacs output files from Matlab. Gro2mat enables direct parsing of the most common Gromacs output formats including the binary xtc-format. No openly available Matlab parser currently exists for this format. The xtc reader is orders of magnitudes faster than other available pdb/ascii workarounds. Gro2mat is especially useful for scientists with an interest in quick prototyping of new mathematical and statistical approaches for Gromacs trajectory analyses. © 2014 Wiley Periodicals, Inc. Copyright © 2014 Wiley Periodicals, Inc.

Activation of phagocytic cells by Staphylococcus epidermidis biofilms: effects of extracellular matrix proteins and the bacterial stress protein GroEL on netosis and MRP-14 release.

PubMed

Dapunt, Ulrike; Gaida, Matthias M; Meyle, Eva; Prior, Birgit; Hänsch, Gertrud M

2016-07-01

The recognition and phagocytosis of free-swimming (planktonic) bacteria by polymorphonuclear neutrophils have been investigated in depth. However, less is known about the neutrophil response towards bacterial biofilms. Our previous work demonstrated that neutrophils recognize activating entities within the extracellular polymeric substance (EPS) of biofilms (the bacterial heat shock protein GroEL) and that this process does not require opsonization. Aim of this study was to evaluate the release of DNA by neutrophils in response to biofilms, as well as the release of the inflammatory cytokine MRP-14. Neutrophils were stimulated with Staphylococcus epidermidis biofilms, planktonic bacteria, extracted EPS and GroEL. Release of DNA and of MRP-14 was evaluated. Furthermore, tissue samples from patients suffering from biofilm infections were collected and evaluated by histology. MRP-14 concentration in blood samples was measured. We were able to show that biofilms, the EPS and GroEL induce DNA release. MRP-14 was only released after stimulation with EPS, not GroEL. Histology of tissue samples revealed MRP-14 positive cells in association with neutrophil infiltration and MRP-14 concentration was elevated in blood samples of patients suffering from biofilm infections. Our data demonstrate that neutrophil-activating entities are present in the EPS and that GroEL induces DNA release by neutrophils. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Signalling networks and dynamics of allosteric transitions in bacterial chaperonin GroEL: implications for iterative annealing of misfolded proteins.

PubMed

Thirumalai, D; Hyeon, Changbong

2018-06-19

Signal transmission at the molecular level in many biological complexes occurs through allosteric transitions. Allostery describes the responses of a complex to binding of ligands at sites that are spatially well separated from the binding region. We describe the structural perturbation method, based on phonon propagation in solids, which can be used to determine the signal-transmitting allostery wiring diagram (AWD) in large but finite-sized biological complexes. Application to the bacterial chaperonin GroEL-GroES complex shows that the AWD determined from structures also drives the allosteric transitions dynamically. From both a structural and dynamical perspective these transitions are largely determined by formation and rupture of salt-bridges. The molecular description of allostery in GroEL provides insights into its function, which is quantitatively described by the iterative annealing mechanism. Remarkably, in this complex molecular machine, a deep connection is established between the structures, reaction cycle during which GroEL undergoes a sequence of allosteric transitions, and function, in a self-consistent manner.This article is part of a discussion meeting issue 'Allostery and molecular machines'. © 2018 The Author(s).

Global Radius of Curvature Estimation and Control for the Hobby-Eberly Telescope

NASA Technical Reports Server (NTRS)

Rakoczy, John; Hall, Drew; Howard, Ricky; Ly, William; Weir, John; Montgomery, Edward; Brantley, Lott W. (Technical Monitor)

2002-01-01

A system, which estimates the global radius of curvature (GroC) and corrects for changes in GroC on a segmented primary mirror has been developed for and verified on McDonald Observatory's Hobby Eberly Telescope (HET). The GroC estimation and control system utilizes HET's primary mirror control (PMC) system and the Segment Alignment Maintenance System (SAMS), an inductive edge sensor system. A special set of boundary conditions is applied to the derivation of the optimal edge match control. The special boundary conditions allow the further derivation of an observer, which enables estimation and control of the Groc mode to within HET's specification. The magnitude of the GroC mode can then be controlled despite the inability of the SAMS edge sensor system, by itself, to observe or control the GroC mode. The observer can be extended to any segmented mirror telescope. It will be shown that the observer improves with accuracy as the number of segments increases. This paper presents the mathematical theory of the observer. Simulation results will demonstrate the inherent accuracy and robustness of the system. Performance verification data from the HET will be presented.

Use of hold-gro erosion control fabric in the establishment of plant species on coal mine soil.

PubMed

Day, A D; Ludeke, K L

1986-09-01

Experiments were conducted on the Black Mesa Coal Mine, Kayenta, Arizona in 1977 and 1978 to study the effectiveness of Hold-Gro Erosion Control Fabric (a product from the Gulf States Paper Corporation, Tuscaloosa, Alabama) in the establishment of plants on coal mine soil following the surface mining of coal. Four plant species were planted: (1) spring barley (Horduem vulgare L.), an annual grass (2) crested wheatgrass (Agropyron cristatum L.), a perennial grass (3) alfalfa (lucerne) (Medicago sativa L.), a perennial legume and (4) fourwing saltbush (Atriplex canescens Pursh.), a perennial shrub. Seeds of each plant species were planted in reclaimed coal mine soil in the spring of the year by both broadcast seeding (conventional culture) and the incorporation of seeds in Hold-Gro Erosion Control Fabric. Average numbers of seedlings established and percent ground cover for all species studied were higher in areas where conventional culture was used than they were in areas where seeds were incorporated in Hold-Gro Erosion Control Fabric. The incorporation of seeds in Hold-Gro Erosion Control Fabric in the establishment of plant species on coal mine soil was not an effective cultural practice in the southwestern United States.

STS-37 Gamma Ray Observatory (GRO) at KSC Payload Hazardous Servicing Fac

NASA Image and Video Library

1990-02-08

S90-36709 (8 Feb 8, 1990) --- Workers at the Payload Hazardous Servicing Facility are removing the Gamma Ray Observatory from its storage container. GRO, one of four NASA Great Observatories, arrived at the Kennedy Space Center (KSC) February 6 from the California plant of builder TRW. Weighing a massive 34,700 pounds, GRO will be the heaviest payload without an upper stage ever carried aboard the space shuttle. It is scheduled for deployment from the orbiter Atlantis during STS-37 in November 1990.

Determination of Jet Noise Radiation Source Locations using a Dual Sideline Cross-Correlation/Spectrum Technique

NASA Technical Reports Server (NTRS)

Allen, C. S.; Jaeger, S. M.

1999-01-01

The goal of our efforts is to extrapolate nearfield jet noise measurements to the geometric far field where the jet noise sources appear to radiate from a single point. To accomplish this, information about the location of noise sources in the jet plume, the radiation patterns of the noise sources and the sound pressure level distribution of the radiated field must be obtained. Since source locations and radiation patterns can not be found with simple single microphone measurements, a more complicated method must be used.

Application of Nutrient Enriched Biochar to Grow Bananas at the Plantation Scale

NASA Astrophysics Data System (ADS)

Nzengung, Valentine

2017-04-01

The majority of soils in Cameroon consist of varying laterites derived from granites. The lateritic soils are generally depleted in nutrients. The most fertile soils in Cameroon are young soils that have formed from volcanic rocks of the Cameroon volcanic line (CVL). The richer volcanic soils which are found in the southwest region and the western regions are used to grow the major cash crops, including cocoa, coffee, rubber, banana, tea, and palm fruits. The government owned Cameroon Development Corporation (CDC) and private commercial farmers in the country have resorted to the heavy use of imported agrochemicals to mitigate the serious and persistent soil fertility challenges. Cameroon is the third largest biomass producer in Africa. This means that Cameroon has a high biomass production potential. Among the many types of biomass available for biochar production in Cameroon, empty fruit bunches (EFB) from the many palm oil plantations offer one of the largest concentration of biomass. CDC alone produces over 200,000 tons of EFB biomass each year. The corporation uses less than half of the EFB it produces in its palm oil processing mills for mulching. The remaining EFB are disposed by open burning leading to significant air pollution. In 2015, we entered into a collaborative understanding with CDC to dispose some of its EFB by pyrolysis to produce biochar. The produced biochar is enriched with natural plant nutrients obtained from animal waste (poultry chicken manure) and volcanic lava dust from the 2001 eruption of Mount Cameroon. The biochar, chicken litter and volcanic rock dust is aged for 14 - 21 days to produce a 100% natural soil enhancer commercialized under the name "QwikGro". The QwikGro is undergoing field evaluation on three hectares of banana plantation owned by CDC. The field trial began in June 2016. Of the three hectares, one hectare of the bananas was planted using 100% (only) QwikGro, the second hectare was planted with 50% QwikGro and received 50% of the dose of artificial fertilizer that CDC uses to grow its bananas. The control was planted and fertilized with artificial fertilizer only. The banana growth parameters collected so far (24 weeks after the bananas were planted) have showed no statistical difference among the three fertigation regimes. The bananas grown with 100% QwikGro showed signs of nitrogen deficiency after three months and were provided with 50% of the mass of QwikGro used at planting. Specifically, the 100% QwikGro mats each received 8 kg of QwikGro at planting and 4 kg after three months. Meanwhile, the 50% QwikGro mats received 4 kg of QwikGro at planting and 2 kg after three months. Flowering and fruiting was observed after 20 weeks. Our presentation will include details on our nutrient enrichment methods, the banana bunch weight and the fruit physical and nutritional parameters at maturity.

Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task

PubMed Central

2015-01-01

Background The third edition of the BioNLP Shared Task was held with the grand theme "knowledge base construction (KB)". The Genia Event (GE) task was re-designed and implemented in light of this theme. For its final report, the participating systems were evaluated from a perspective of annotation. To further explore the grand theme, we extended the evaluation from a perspective of KB construction. Also, the Gene Regulation Ontology (GRO) task was newly introduced in the third edition. The final evaluation of the participating systems resulted in relatively low performance. The reason was attributed to the large size and complex semantic representation of the ontology. To investigate potential benefits of resource exchange between the presumably similar tasks, we measured the overlap between the datasets of the two tasks, and tested whether the dataset for one task can be used to enhance performance on the other. Results We report an extended evaluation on all the participating systems in the GE task, incoporating a KB perspective. For the evaluation, the final submission of each participant was converted to RDF statements, and evaluated using 8 queries that were formulated in SPARQL. The results suggest that the evaluation may be concluded differently between the two different perspectives, annotation vs. KB. We also provide a comparison of the GE and GRO tasks by converting their datasets into each other's format. More than 90% of the GE data could be converted into the GRO task format, while only half of the GRO data could be mapped to the GE task format. The imbalance in conversion indicates that the GRO is a comprehensive extension of the GE task ontology. We further used the converted GRO data as additional training data for the GE task, which helped improve GE task participant system performance. However, the converted GE data did not help GRO task participants, due to overfitting and the ontology gap. PMID:26202680

A gamma ray observatory ground attitude error analysis study using the generalized calibration system

NASA Technical Reports Server (NTRS)

Ketchum, E.

1988-01-01

The Goddard Space Flight Center (GSFC) Flight Dynamics Division (FDD) will be responsible for performing ground attitude determination for Gamma Ray Observatory (GRO) support. The study reported in this paper provides the FDD and the GRO project with ground attitude determination error information and illustrates several uses of the Generalized Calibration System (GCS). GCS, an institutional software tool in the FDD, automates the computation of the expected attitude determination uncertainty that a spacecraft will encounter during its mission. The GRO project is particularly interested in the uncertainty in the attitude determination using Sun sensors and a magnetometer when both star trackers are inoperable. In order to examine the expected attitude errors for GRO, a systematic approach was developed including various parametric studies. The approach identifies pertinent parameters and combines them to form a matrix of test runs in GCS. This matrix formed the basis for this study.

Three dimensional volcano-acoustic source localization at Karymsky Volcano, Kamchatka, Russia

NASA Astrophysics Data System (ADS)

Rowell, Colin

We test two methods of 3-D acoustic source localization on volcanic explosions and small-scale jetting events at Karymsky Volcano, Kamchatka, Russia. Recent infrasound studies have provided evidence that volcanic jets produce low-frequency aerodynamic sound (jet noise) similar to that from man-made jet engines. Man-made jets are known to produce sound through turbulence along the jet axis, but discrimination of sources along the axis of a volcanic jet requires a network of sufficient topographic relief to attain resolution in the vertical dimension. At Karymsky Volcano, the topography of an eroded edifice adjacent to the active cone provided a platform for the atypical deployment of five infrasound sensors with intra-network relief of ˜600 m in July 2012. A novel 3-D inverse localization method, srcLoc, is tested and compared against a more common grid-search semblance technique. Simulations using synthetic signals indicate that srcLoc is capable of determining vertical source locations for this network configuration to within +/-150 m or better. However, srcLoc locations for explosions and jetting at Karymsky Volcano show a persistent overestimation of source elevation and underestimation of sound speed by an average of ˜330 m and 25 m/s, respectively. The semblance method is able to produce more realistic source locations by fixing the sound speed to expected values of 335 - 340 m/s. The consistency of location errors for both explosions and jetting activity over a wide range of wind and temperature conditions points to the influence of topography. Explosion waveforms exhibit amplitude relationships and waveform distortion strikingly similar to those theorized by modeling studies of wave diffraction around the crater rim. We suggest delay of signals and apparent elevated source locations are due to altered raypaths and/or crater diffraction effects. Our results suggest the influence of topography in the vent region must be accounted for when attempting 3-D volcano acoustic source localization. Though the data presented here are insufficient to resolve noise sources for these jets, which are much smaller in scale than those of previous volcanic jet noise studies, similar techniques may be successfully applied to large volcanic jets in the future.

Eukaryotic-like Ser/Thr Protein Kinases SpkC/F/K Are Involved in Phosphorylation of GroES in the Cyanobacterium Synechocystis

PubMed Central

Zorina, Anna; Stepanchenko, Natalia; Novikova, Galina V.; Sinetova, Maria; Panichkin, Vladimir B.; Moshkov, Igor E.; Zinchenko, Vladislav V.; Shestakov, Sergey V.; Suzuki, Iwane; Murata, Norio; Los, Dmitry A.

2011-01-01

Serine/threonine protein kinases (STPKs) are the major participants in intracellular signal transduction in eukaryotes, such as yeasts, fungi, plants, and animals. Genome sequences indicate that these kinases are also present in prokaryotes, such as cyanobacteria. However, their roles in signal transduction in prokaryotes remain poorly understood. We have attempted to identify the roles of STPKs in response to heat stress in the prokaryotic cyanobacterium Synechocystis sp. PCC 6803, which has 12 genes for STPKs. Each gene was individually inactivated to generate a gene-knockout library of STPKs. We applied in vitro Ser/Thr protein phosphorylation and phosphoproteomics and identified the methionyl-tRNA synthetase, large subunit of RuBisCO, 6-phosphogluconate dehydrogenase, translation elongation factor Tu, heat-shock protein GrpE, and small chaperonin GroES as the putative targets for Ser/Thr phosphorylation. The expressed and purified GroES was used as an external substrate to screen the protein extracts of the individual mutants for their Ser/Thr kinase activities. The mutants that lack one of the three protein kinases, SpkC, SpkF, and SpkK, were unable to phosphorylate GroES in vitro, suggesting possible interactions between them towards their substrate. Complementation of the mutated SpkC, SpkF, and SpkK leads to the restoration of the ability of cells to phosphorylate the GroES. This suggests that these three STPKs are organized in a sequential order or a cascade and they work one after another to finally phosphorylate the GroES. PMID:21551175

A New Improved and Extended Version of the Multicell Bacterial Simulator gro.

PubMed

Gutiérrez, Martín; Gregorio-Godoy, Paula; Pérez Del Pulgar, Guillermo; Muñoz, Luis E; Sáez, Sandra; Rodríguez-Patón, Alfonso

2017-08-18

gro is a cell programming language developed in Klavins Lab for simulating colony growth and cell-cell communication. It is used as a synthetic biology prototyping tool for simulating multicellular biocircuits and microbial consortia. In this work, we present several extensions made to gro that improve the performance of the simulator, make it easier to use, and provide new functionalities. The new version of gro is between 1 and 2 orders of magnitude faster than the original version. It is able to grow microbial colonies with up to 10 5 cells in less than 10 min. A new library, CellEngine, accelerates the resolution of spatial physical interactions between growing and dividing cells by implementing a new shoving algorithm. A genetic library, CellPro, based on Probabilistic Timed Automata, simulates gene expression dynamics using simplified and easy to compute digital proteins. We also propose a more convenient language specification layer, ProSpec, based on the idea that proteins drive cell behavior. CellNutrient, another library, implements Monod-based growth and nutrient uptake functionalities. The intercellular signaling management was improved and extended in a library called CellSignals. Finally, bacterial conjugation, another local cell-cell communication process, was added to the simulator. To show the versatility and potential outreach of this version of gro, we provide studies and novel examples ranging from synthetic biology to evolutionary microbiology. We believe that the upgrades implemented for gro have made it into a powerful and fast prototyping tool capable of simulating a large variety of systems and synthetic biology designs.

Jet-Surface Interaction Test: Phased Array Noise Source Localization Results

NASA Technical Reports Server (NTRS)

Podboy, Gary G.

2013-01-01

An experiment was conducted to investigate the effect that a planar surface located near a jet flow has on the noise radiated to the far-field. Two different configurations were tested: 1) a shielding configuration in which the surface was located between the jet and the far-field microphones, and 2) a reflecting configuration in which the surface was mounted on the opposite side of the jet, and thus the jet noise was free to reflect off the surface toward the microphones. Both conventional far-field microphone and phased array noise source localization measurements were obtained. This paper discusses phased array results, while a companion paper (Brown, C.A., "Jet-Surface Interaction Test: Far-Field Noise Results," ASME paper GT2012-69639, June 2012.) discusses far-field results. The phased array data show that the axial distribution of noise sources in a jet can vary greatly depending on the jet operating condition and suggests that it would first be necessary to know or be able to predict this distribution in order to be able to predict the amount of noise reduction to expect from a given shielding configuration. The data obtained on both subsonic and supersonic jets show that the noise sources associated with a given frequency of noise tend to move downstream, and therefore, would become more difficult to shield, as jet Mach number increases. The noise source localization data obtained on cold, shock-containing jets suggests that the constructive interference of sound waves that produces noise at a given frequency within a broadband shock noise hump comes primarily from a small number of shocks, rather than from all the shocks at the same time. The reflecting configuration data illustrates that the law of reflection must be satisfied in order for jet noise to reflect off of a surface to an observer, and depending on the relative locations of the jet, the surface, and the observer, only some of the jet noise sources may satisfy this requirement.

Analysis of jet-airfoil interaction noise sources by using a microphone array technique

NASA Astrophysics Data System (ADS)

Fleury, Vincent; Davy, Renaud

2016-03-01

The paper is concerned with the characterization of jet noise sources and jet-airfoil interaction sources by using microphone array data. The measurements were carried-out in the anechoic open test section wind tunnel of Onera, Cepra19. The microphone array technique relies on the convected, Lighthill's and Ffowcs-Williams and Hawkings' acoustic analogy equation. The cross-spectrum of the source term of the analogy equation is sought. It is defined as the optimal solution to a minimal error equation using the measured microphone cross-spectra as reference. This inverse problem is ill-posed yet. A penalty term based on a localization operator is therefore added to improve the recovery of jet noise sources. The analysis of isolated jet noise data in subsonic regime shows the contribution of the conventional mixing noise source in the low frequency range, as expected, and of uniformly distributed, uncorrelated noise sources in the jet flow at higher frequencies. In underexpanded supersonic regime, a shock-associated noise source is clearly identified, too. An additional source is detected in the vicinity of the nozzle exit both in supersonic and subsonic regimes. In the presence of the airfoil, the distribution of the noise sources is deeply modified. In particular, a strong noise source is localized on the flap. For high Strouhal numbers, higher than about 2 (based on the jet mixing velocity and diameter), a significant contribution from the shear-layer near the flap is observed, too. Indications of acoustic reflections on the airfoil are also discerned.

Experimental assessment of theory for refraction of sound by a shear layer

NASA Technical Reports Server (NTRS)

Schlinker, R. H.; Amiet, R. K.

1978-01-01

The refraction angle and amplitude changes associated with sound transmission through a circular, open-jet shear layer were studied in a 0.91 m diameter open jet acoustic research tunnel. Free stream Mach number was varied from 0.1 to 0.4. Good agreement between refraction angle correction theory and experiment was obtained over the test Mach number, frequency and angle measurement range for all on-axis acoustic source locations. For off-axis source positions, good agreement was obtained at a source-to-shear layer separation distance greater than the jet radius. Measureable differences between theory and experiment occurred at a source-to-shear layer separation distance less than one jet radius. A shear layer turbulence scattering experiment was conducted at 90 deg to the open jet axis for the same free stream Mach numbers and axial source locations used in the refraction study. Significant discrete tone spectrum broadening and tone amplitude changes were observed at open jet Mach numbers above 0.2 and at acoustic source frequencies greater than 5 kHz. More severe turbulence scattering was observed for downstream source locations.

The GRO remote terminal system

NASA Technical Reports Server (NTRS)

Zillig, David J.; Valvano, Joe

1994-01-01

In March 1992, NASA HQ challenged GSFC/Code 531 to propose a fast, low-cost approach to close the Tracking Data Relay Satellite System (TDRSS) Zone-of-Exclusion (ZOE) over the Indian Ocean in order to provide global communications coverage for the Compton Gamma Ray Observatory (GRO) spacecraft. GRO had lost its tape recording capability which limited its valuable science data return to real-time contacts with the TDRS-E and TDRS-W synchronous data relay satellites, yielding only approximately 62 percent of the possible data obtainable. To achieve global coverage, a TDRS spacecraft would have to be moved over the Indian Ocean out of line-of-sight control of White Sands Ground Terminal (WSGT). To minimize operations life cycle costs, Headquarters also set a goal for remote control, from the WSGT, of the overseas ground station which was required for direct communications with TDRS-1. On August 27, 1992, Code 531 was given the go ahead to implement the proposed GRO Relay Terminal System (GRTS). This paper describes the Remote Ground Relay Terminal (RGRT) which went operational at the Canberra Deep Space Communications Complex (CDSCC) in Canberra, Australia in December 1993 and is currently augmenting the TDRSS constellation in returning between 80-100 percent of GRO science data under the control of a single operator at WSGT.

A search for radiative neutrino decay from supernovae

NASA Technical Reports Server (NTRS)

Miller, Richard S.; Svoboda, Robert C.

1993-01-01

This document presents the data analysis procedures proposed for use with the COMPTEL instrument aboard the Compton Gamma Ray Observatory (GRO) in the search for radiative neutrino decay from supernovae. The proposed analysis methodology is an extension of a standard procedure used by the COMPTEL team in searching for a variety of source types. We have applied the procedures to a set of simulated data to demonstrate the feasibility of the method to this project.

Jet-Surface Interaction Test: Phased Array Noise Source Localization Results

NASA Technical Reports Server (NTRS)

Podboy, Gary G.

2012-01-01

An experiment was conducted to investigate the effect that a planar surface located near a jet flow has on the noise radiated to the far-field. Two different configurations were tested: 1) a shielding configuration in which the surface was located between the jet and the far-field microphones, and 2) a reflecting configuration in which the surface was mounted on the opposite side of the jet, and thus the jet noise was free to reflect off the surface toward the microphones. Both conventional far-field microphone and phased array noise source localization measurements were obtained. This paper discusses phased array results, while a companion paper discusses far-field results. The phased array data show that the axial distribution of noise sources in a jet can vary greatly depending on the jet operating condition and suggests that it would first be necessary to know or be able to predict this distribution in order to be able to predict the amount of noise reduction to expect from a given shielding configuration. The data obtained on both subsonic and supersonic jets show that the noise sources associated with a given frequency of noise tend to move downstream, and therefore, would become more difficult to shield, as jet Mach number increases. The noise source localization data obtained on cold, shock-containing jets suggests that the constructive interference of sound waves that produces noise at a given frequency within a broadband shock noise hump comes primarily from a small number of shocks, rather than from all the shocks at the same time. The reflecting configuration data illustrates that the law of reflection must be satisfied in order for jet noise to reflect off of a surface to an observer, and depending on the relative locations of the jet, the surface, and the observer, only some of the jet noise sources may satisfy this requirement.

Compton Gamma-Ray Observatory

NASA Technical Reports Server (NTRS)

1991-01-01

This photograph shows the Compton Gamma-Ray Observatory (GRO) being deployed by the Remote Manipulator System (RMS) arm aboard the Space Shuttle Atlantis during the STS-37 mission in April 1991. The GRO reentered Earth atmosphere and ended its successful mission in June 2000. For nearly 9 years, the GRO Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center (MSFC), kept an unblinking watch on the universe to alert scientists to the invisible, mysterious gamma-ray bursts that had puzzled them for decades. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of stars, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. In January 1999, the instrument, via the Internet, cued a computer-controlled telescope at Las Alamos National Laboratory in Los Alamos, New Mexico, within 20 seconds of registering a burst. With this capability, the gamma-ray experiment came to serve as a gamma-ray burst alert for the Hubble Space Telescope, the Chandra X-Ray Observatory, and major gound-based observatories around the world. Thirty-seven universities, observatories, and NASA centers in 19 states, and 11 more institutions in Europe and Russia, participated in the BATSE science program.

Parsec-scale Faraday rotation and polarization of 20 active galactic nuclei jets

NASA Astrophysics Data System (ADS)

Kravchenko, E. V.; Kovalev, Y. Y.; Sokolovsky, K. V.

2017-05-01

We perform polarimetry analysis of 20 active galactic nuclei jets using the very long baseline array at 1.4, 1.6, 2.2, 2.4, 4.6, 5.0, 8.1, 8.4 and 15.4 GHz. The study allowed us to investigate linearly polarized properties of the jets at parsec scales: distribution of the Faraday rotation measure (RM) and fractional polarization along the jets, Faraday effects and structure of Faraday-corrected polarization images. Wavelength dependence of the fractional polarization and polarization angle is consistent with external Faraday rotation, while some sources show internal rotation. The RM changes along the jets, systematically increasing its value towards synchrotron self-absorbed cores at shorter wavelengths. The highest core RM reaches 16 900 rad m-2 in the source rest frame for the quasar 0952+179, suggesting the presence of highly magnetized, dense media in these regions. The typical RM of transparent jet regions has values of an order of a hundred rad m-2. Significant transverse RM gradients are observed in seven sources. The magnetic field in the Faraday screen has no preferred orientation, and is observed to be random or regular from source to source. Half of the sources show evidence for the helical magnetic fields in their rotating magneto-ionic media. At the same time jets themselves contain large-scale, ordered magnetic fields and tend to align its direction with the jet flow. The observed variety of polarized signatures can be explained by a model of spine-sheath jet structure.

Gamma Ray Observatory (GRO) Prelaunch Mission Operations Report (MOR)

NASA Technical Reports Server (NTRS)

1991-01-01

The NASA Astrophysics Program is an endeavor to understand the origin and fate of the universe, to understand the birth and evolution of the large variety of objects in the universe, from the most benign to the most violent, and to probe the fundamental laws of physics by examining their behavior under extreme physical conditions. These goals are pursued by means of observations across the entire electromagnetic spectrum, and through theoretical interpretation of radiations and fields associated with astrophysical systems. Astrophysics orbital flight programs are structured under one of two operational objectives: (1) the establishment of long duration Great Observatories for viewing the universe in four major wavelength regions of the electromagnetic spectrum (radio/infrared/submillimeter, visible/ultraviolet, X-ray, and gamma ray), and (2) obtaining crucial bridging and supporting measurements via missions with directed objectives of intermediate or small scope conducted within the Explorer and Spacelab programs. Under (1) in this context, the Gamma Ray Observatory (GRO) is one of NASA's four Great Observatories. The other three are the Hubble Space Telescope (HST) for the visible and ultraviolet portion of the spectrum, the Advanced X-ray Astrophysics Facility (AXAF) for the X-ray band, and the Space Infrared Telescope Facility (SIRTF) for infrared wavelengths. GRO's specific mission is to study the sources and astrophysical processes that produce the highest energy electromagnetic radiation from the cosmos. The fundamental physical processes that are known to produce gamma radiation in the universe include nuclear reactions, electron bremsstrahlung, matter-antimatter annihilation, elementary particle production and decay, Compton scattering, synchrotron radiation. GRO will address a variety of questions relevant to understanding the universe, such as: the formation of the elements; the structure and dynamics of the Galaxy; the nature of pulsars; the existence of black holes; the possible existence of large amounts of antimatter, energetic and explosive phenomena occurring in galactic nuclei; the origin of the cosmic diffuse background; particle acceleration in the Sun, stars and stellar systems; processes in supernovae; and the origin and evolution of the universe itself.

Characterization and proteomic analysis of the Pseudomonas sp. HK-6 xenB knockout mutant under RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) stress.

PubMed

Lee, Bheong-Uk; Choi, Moon-Seop; Oh, Kye-Heon

2015-01-01

Pseudomonas sp. HK-6 is able to utilize RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) as its sole nitrogen source. The role of the xenB gene, encoding xenobiotic reductase B, was investigated using HK-6 xenB knockout mutants. The xenB mutant degraded RDX to a level that was 10-fold less than that obtained with the wild-type HK-6 strain. After 60 days of culture with 25 or 50 μM RDX, no residual RDX was detected in the supernatants of the wild-type aerobically grown cultures, whereas approximately 90 % of the RDX remained in the xenB mutant cultures. The xenB mutant bacteria exhibited a 10(2)-10(4)-fold decrease in survival rate compared to the wild-type. The expression of DnaK and GroEL proteins, two typical stress shock proteins (SSPs), in the xenB mutant increased after immediate exposure to RDX, yet dramatically decreased after 4 h of exposure. In addition, DnaK and GroEL were more highly expressed in the cultures with 25 μM RDX in the medium but showed low expression in the cultures with 50 or 75 μM RDX. The expression levels of the dnaK and groEL genes measured by RT-qPCR were also much lower in the xenB genetic background. Analyses of the proteomes of the HK-6 and xenB mutant cells grown under conditions of RDX stress showed increased induction of several proteins, such as Alg8, alginate biosynthesis sensor histidine kinase, and OprH in the xenB mutants when compared to wild-type. However, many proteins, including two SSPs (DnaK and GroEL) and proteins involved in metabolism, exhibited lower expression levels in the xenB mutant than in the wild-type HK-6 strain. The xenB knockout mutation leads to reduced RDX degradation ability, which renders the mutant more sensitive to RDX stress and results in a lower survival rate and an altered proteomic profile under RDX stress.

Minichaperone (GroEL191-345) mediated folding of MalZ proceeds by binding and release of native and functional intermediates.

PubMed

Jain, Neha; Knowles, Timothy J; Lund, Peter A; Chaudhuri, Tapan K

2018-06-02

The isolated apical domain of GroEL consisting of residues 191-345 (known as "minichaperone") binds and assists the folding of a wide variety of client proteins without GroES and ATP, but the mechanism of its action is still unknown. In order to probe into the matter, we have examined minichaperone-mediated folding of a large aggregation prone protein Maltodextrin-glucosidase (MalZ). The key objective was to identify whether MalZ exists free in solution, or remains bound to, or cycling on and off the minichaperone during the refolding process. When GroES was introduced during refolding process, production of the native MalZ was inhibited. We also observed the same findings with a trap mutant of GroEL, which stably captures a predominantly non-native MalZ released from minichaperone during refolding process, but does not release it. Tryptophan and ANS fluorescence measurements indicated that refolded MalZ has the same structure as the native MalZ, but that its structure when bound to minichaperone is different. Surface plasmon resonance measurements provide an estimate for the equilibrium dissociation constant KD for the MalZ-minichaperone complex of 0.21 ± 0.04 μM, which are significantly higher than for most GroEL clients. This showed that minichaperone interacts loosely with MalZ to allow the protein to change its conformation and fold while bound during the refolding process. These observations suggest that the minichaperone works by carrying out repeated cycles of binding aggregation-prone protein MalZ in a relatively compact conformation and in a partially folded but active state, and releasing them to attempt to fold in solution. Copyright © 2018 Elsevier B.V. All rights reserved.

The Characterization of Military Aircraft Jet Noise Using Near-Field Acoustical Holography Methods

NASA Astrophysics Data System (ADS)

Wall, Alan Thomas

The noise emissions of jets from full-scale engines installed on military aircraft pose a significant hearing loss risk to military personnel. Noise reduction technologies and the development of operational procedures that minimize noise exposure to personnel are enhanced by the accurate characterization of noise sources within a jet. Hence, more than six decades of research have gone into jet noise measurement and prediction. In the past decade, the noise-source visualization tool near-field acoustical holography (NAH) has been applied to jets. NAH fits a weighted set of expansion wave functions, typically planar, cylindrical, or spherical, to measured sound pressures in the field. NAH measurements were made of a jet from an installed engine on a military aircraft. In the present study, the algorithm of statistically optimized NAH (SONAH) is modified to account for the presence of acoustic reflections from the concrete surface over which the jet was measured. The three dimensional field in the jet vicinity is reconstructed, and information about sources is inferred from reconstructions at the boundary of the turbulent jet flow. Then, a partial field decomposition (PFD) is performed, which represents the total field as the superposition of multiple, independent partial fields. This is the most direct attempt to equate partial fields with independent sources in a jet to date.

HAER NY,55GRO,1 (sheet 2 of 3) AveryBartholomew Patent Railroad ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

HAER NY,55-GRO,1- (sheet 2 of 3) - Avery-Bartholomew Patent Railroad Iron Bridge, Town park south of Route 222, west of Owasco Inlet (moved from Elm Street Extension spanning Fall Creek, Nubia, NY), Groton, Tompkins County, NY

HAER NY,55GRO,1 (sheet 3 of 3) AveryBartholomew Patent Railroad ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

HAER NY,55-GRO,1- (sheet 3 of 3) - Avery-Bartholomew Patent Railroad Iron Bridge, Town park south of Route 222, west of Owasco Inlet (moved from Elm Street Extension spanning Fall Creek, Nubia, NY), Groton, Tompkins County, NY

HAER NY,55GRO,1 (sheet 1 of 3) AveryBartholomew Patent Railroad ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

HAER NY,55-GRO,1- (sheet 1 of 3) - Avery-Bartholomew Patent Railroad Iron Bridge, Town park south of Route 222, west of Owasco Inlet (moved from Elm Street Extension spanning Fall Creek, Nubia, NY), Groton, Tompkins County, NY

Structural and Mechanistic Insight into the Listeria monocytogenes Two-enzyme Lipoteichoic Acid Synthesis System*

PubMed Central

Campeotto, Ivan; Percy, Matthew G.; MacDonald, James T.; Förster, Andreas; Freemont, Paul S.; Gründling, Angelika

2014-01-01

Lipoteichoic acid (LTA) is an important cell wall component required for proper cell growth in many Gram-positive bacteria. In Listeria monocytogenes, two enzymes are required for the synthesis of this polyglycerolphosphate polymer. The LTA primase LtaPLm initiates LTA synthesis by transferring the first glycerolphosphate (GroP) subunit onto the glycolipid anchor and the LTA synthase LtaSLm extends the polymer by the repeated addition of GroP subunits to the tip of the growing chain. Here, we present the crystal structures of the enzymatic domains of LtaPLm and LtaSLm. Although the enzymes share the same fold, substantial differences in the cavity of the catalytic site and surface charge distribution contribute to enzyme specialization. The eLtaSLm structure was also determined in complex with GroP revealing a second GroP binding site. Mutational analysis confirmed an essential function for this binding site and allowed us to propose a model for the binding of the growing chain. PMID:25128528

The Nature and Evolutionary History of GRO J1744-28

NASA Technical Reports Server (NTRS)

Rappaport, S.

1997-01-01

GRO J1744-28 is the first known X-ray source to display bursts, periodic pulsations, and quasi-periodic oscillations. This source may thus provide crucial clues that will lead to an understanding of the differences in the nature of the X-ray variability from various accreting neutron stars. The orbital period is 11.8 days, and the measured mass function of 1.31 x 10(exp -4) solar mass is one of the smallest among all known binaries. If we assume that the donor star is a low-mass giant transferring matter through the inner Lagrange point, then we can show that its mass is lower than approximately 0.7 solar mass and probably closer to 0.25 solar mass. Higher mass, but unevolved, donor stars are shown to be implausible. We also demonstrate that the current He core mass of the donor star lies in the range of 0.20-0.25 solar mass. Thus, this system is most likely in the final stages of losing its hydrogen-rich envelope, with only a small amount of mass remaining in the envelope. If this picture is correct, then GRO J1744-28 may well represent the closest observational link that we have between the low-mass X-ray binaries and recycled binary pulsars in wide orbits. We have carried out a series of binary evolution calculations and explored, both systematically and via a novel Monte Carlo approach, the range of initial system parameters and input physics that can lead to the binary parameters of the present-day GRO J1744-28 system. The input parameters include both the initial total mass and the core mass of the donor star, the neutron-star mass, the strength of the magnetic braking, the mass-capture fraction, and the specifics of the core mass/radius relation for giants. Through these evolution calculations, we compute probability distributions for the current binary system parameters (i.e., the total mass, core mass, radius, luminosity, and K-band magnitude of the donor star, the neutron star mass, the orbital inclination angle, and the semimajor axis of the binary). Our calculations yield the following values for the GRO J1744-28 system parameters (with 95% confidence limits in parentheses): donor star mass: 0.24 solar mass (0.2-0.7 solar mass); He core mass of the donor star: 0.22 solar mass (0.20-0.25 solar mass); neutron-star mass: 1.7 solar mass (1.39-1.96 solar mass); orbital inclination angle: 18deg (7deg-22deg); semi- major axis: 64 lt-s (60-67 lt-s); radius of the donor star: 6.2 solar radius(6-9 solar radius); luminosity of donor star: 23 solar luminosity (15-49 solar luminosity), and long-term mass transfer rate at the current epoch: 5 x 10(exp -10)solar mass/yr (2 x 10(exp -10) to 5 x 10(exp -9)solar mass/yr). We deduce that the magnetic field of the underlying neutron star lies in the range of approximately 1.8 x 10(exp 11)G to approximately 7 x 10(exp 11)G, with a most probable value of 2.7 x 10(exp 11)G. This is evidently sufficiently strong to funnel the accretion flow onto the magnetic polar caps and suppress the thermonuclear flashes that would otherwise give rise to the type 1 X-ray bursts observed in most X-ray bursters. We present a simple paradigm for magnetic accreting neutron stars where X-ray pulsars, GRO J1744-28, the Rapid Burster, and the type 1 X-ray bursters may form a continuum of possible behaviors among accreting neutron stars, with the strength of the neutron-star magnetic field serving as a crucial parameter that determines the mode of X-ray variability from a given object.

On the Jet Properties of γ-Ray-loud Active Galactic Nuclei

NASA Astrophysics Data System (ADS)

Chen, Liang

2018-04-01

Based on broadband spectral energy distributions (SEDs), we estimate the jet physical parameters of 1392 γ-ray-loud active galactic nuclei (AGNs), the largest sample so far. The (SED) jet power and magnetization parameter are derived for these AGNs. Out of these sources, the accretion disk luminosity of 232 sources and (extended) kinetic jet powers of 159 sources are compiled from archived papers. We find the following. (1) Flat-spectrum radio quasars (FSRQs) and BL Lacs are well separated by {{Γ }}=-0.127{log}{L}γ +8.18 in the γ-ray luminosity versus photon index plane with a success rate of 88.6%. (2) Most FSRQs present a (SED) jet power larger than the accretion power, which suggests that the relativistic jet-launching mechanism is dominated by the Blandford–Znajek process. This result confirms previous findings. (3) There is a significant anticorrelation between jet magnetization and a ratio of the (SED) jet power to the (extended) kinetic jet power, which, for the first time, provides supporting evidence for the jet energy transportation theory: a high-magnetization jet may more easily transport energy to a large scale than a low-magnetization jet.

CENTIMETER CONTINUUM OBSERVATIONS OF THE NORTHERN HEAD OF THE HH 80/81/80N JET: REVISING THE ACTUAL DIMENSIONS OF A PARSEC-SCALE JET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masque, Josep M.; Estalella, Robert; Girart, Josep M.

2012-10-10

We present 6 and 20 cm Jansky Very Large Array/Very Large Array observations of the northern head of the HH 80/81/80N jet, one of the largest collimated jet systems known so far, aimed to look for knots farther than HH 80N, the northern head of the jet. Aligned with the jet and 10' northeast of HH 80N, we found a radio source not reported before, with a negative spectral index similar to that of HH 80, HH 81, and HH 80N. The fit of a precessing jet model to the knots of the HH 80/81/80N jet, including the new source,more » shows that the position of this source is close to the jet path resulting from the modeling. If the new source belongs to the HH 80/81/80N jet, its derived size and dynamical age are 18.4 pc and >9 Multiplication-Sign 10{sup 3} yr, respectively. If the jet is symmetric, its southern lobe would expand beyond the cloud edge resulting in an asymmetric appearance of the jet. Based on the updated dynamical age, we speculate on the possibility that the HH 80/81/80N jet triggered the star formation observed in a dense core found ahead of HH 80N, which shows signposts of interaction with the jet. These results indicate that parsec-scale radio jets can play a role in the stability of dense clumps and the regulation of star formation in the molecular cloud.« less

DAMAS Processing for a Phased Array Study in the NASA Langley Jet Noise Laboratory

NASA Technical Reports Server (NTRS)

Brooks, Thomas F.; Humphreys, William M.; Plassman, Gerald e.

2010-01-01

A jet noise measurement study was conducted using a phased microphone array system for a range of jet nozzle configurations and flow conditions. The test effort included convergent and convergent/divergent single flow nozzles, as well as conventional and chevron dual-flow core and fan configurations. Cold jets were tested with and without wind tunnel co-flow, whereas, hot jets were tested only with co-flow. The intent of the measurement effort was to allow evaluation of new phased array technologies for their ability to separate and quantify distributions of jet noise sources. In the present paper, the array post-processing method focused upon is DAMAS (Deconvolution Approach for the Mapping of Acoustic Sources) for the quantitative determination of spatial distributions of noise sources. Jet noise is highly complex with stationary and convecting noise sources, convecting flows that are the sources themselves, and shock-related and screech noise for supersonic flow. The analysis presented in this paper addresses some processing details with DAMAS, for the array positioned at 90 (normal) to the jet. The paper demonstrates the applicability of DAMAS and how it indicates when strong coherence is present. Also, a new approach to calibrating the array focus and position is introduced and demonstrated.

Jet Noise Source Localization Using Linear Phased Array

NASA Technical Reports Server (NTRS)

Agboola, Ferni A.; Bridges, James

2004-01-01

A study was conducted to further clarify the interpretation and application of linear phased array microphone results, for localizing aeroacoustics sources in aircraft exhaust jet. Two model engine nozzles were tested at varying power cycles with the array setup parallel to the jet axis. The array position was varied as well to determine best location for the array. The results showed that it is possible to resolve jet noise sources with bypass and other components separation. The results also showed that a focused near field image provides more realistic noise source localization at low to mid frequencies.

The silent base flow and the sound sources in a laminar jet.

PubMed

Sinayoko, Samuel; Agarwal, Anurag

2012-03-01

An algorithm to compute the silent base flow sources of sound in a jet is introduced. The algorithm is based on spatiotemporal filtering of the flow field and is applicable to multifrequency sources. It is applied to an axisymmetric laminar jet and the resulting sources are validated successfully. The sources are compared to those obtained from two classical acoustic analogies, based on quiescent and time-averaged base flows. The comparison demonstrates how the silent base flow sources shed light on the sound generation process. It is shown that the dominant source mechanism in the axisymmetric laminar jet is "shear-noise," which is a linear mechanism. The algorithm presented here could be applied to fully turbulent flows to understand the aerodynamic noise-generation mechanism. © 2012 Acoustical Society of America

Investigation of Twin Jet Aeroacoustic Properties in the Presence of a Hybrid Wing Body Shield

NASA Technical Reports Server (NTRS)

Doty, Michael J.

2012-01-01

In preparation for upcoming wind tunnel acoustic experiments of a Hybrid Wing Body (HWB) vehicle with two jet engine simulator units, a series of twin jet aeroacoustic investigations were conducted leading to increased understanding and risk mitigation. A previously existing twin jet nozzle system and a fabricated HWB aft deck fuselage are combined for a 1.9% model scale study of jet nozzle spacing and jet cant angle effects, elevon deflection into the jet plume, and acoustic shielding by the fuselage body. Linear and phased array microphone measurements are made, and data processing includes the use of DAMAS (Deconvolution Approach for the Mapping of Acoustic Sources). Closely-spaced twin jets with a 5 inward cant angle exhibit reduced noise levels compared to their parallel flow counterparts at similar and larger nozzle spacings. A 40 elevon deflection into the twin jet plume, which is required for HWB ground rotation, can significantly increase upstream noise levels (more than 5 dB OASPL) with only minimal increases in the downstream direction. Lastly, DAMAS processing can successfully measure the noise source distribution of multiple shielded jet sources.

XTE J1946+274 = GRO J1944+26 Observations with RXTE and BATSE

NASA Technical Reports Server (NTRS)

Wilson, Colleen A.; Finger, Mark H.; Scott, D. Matthew

2000-01-01

XTE J1946+274 = GRO J1944+26 is a 15.8 second transient X-ray pulsar discovered simultaneously with the Rossi X-ray Timing Explorer (RXTE) and Burst and Transient Source Experiment (BATSE) onboard the Compton Gamma Ray Observatory (CGRO) during an outburst in September 1998. Since its discovery, XTE J1946+274 has undergone 7 regularly spaced outbursts, that were observed with BATSE and the RXTE All-Sky Monitor (ASM). The pulse frequency and pulsed flux measurements with BATSE suggest that XTE J1946+274 is in an about 170 day orbit and is outbursting twice per orbit. The first outburst, which was brighter and longer than subsequent outbursts, was also observed with the RXTE Proportional Counter Array (PCA). We present histories of pulse frequency, pulsed flux, and total flux measured in the 20-50 keV band with BATSE and a history of the 2-10 keV total flux measured with the RXTE ASM. From the first outburst, we present energy and power spectra and pulse profiles from RXTE PCA observations.

Kinetics and thermodynamics of the thermal inactivation and chaperone assisted folding of zebrafish dihydrofolate reductase.

PubMed

Thapliyal, Charu; Jain, Neha; Rashid, Naira; Chaudhuri Chattopadhyay, Pratima

2018-01-01

The maintenance of thermal stability is a major issue in protein engineering as many proteins tend to form inactive aggregates at higher temperatures. Zebrafish DHFR, an essential protein for the survival of cells, shows irreversible thermal unfolding transition. The protein exhibits complete unfolding and loss of activity at 50 °C as monitored by UV-Visible, fluorescence and far UV-CD spectroscopy. The heat induced inactivation of zDHFR follows first-order kinetics and Arrhenius law. The variation in the value of inactivation rate constant, k with increasing temperatures depicts faster inactivation at elevated temperatures. We have attempted to study the chaperoning ability of a shorter variant of GroEL (minichaperone) and compared it with that of conventional GroEL-GroES chaperone system. Both the chaperone system prevented the aggregation and assisted in refolding of zDHFR. The rate of thermal inactivation was significantly retarded in the presence of chaperones which indicate that it enhances the thermal stability of the enzyme. As minichaperone is less complex, and does not require high energy co-factors like ATP, for its function as compared to conventional GroEL-GroES system, it can act as a very good in vitro as well as in vivo chaperone model for monitoring assisted protein folding phenomenon. Copyright © 2017 Elsevier Inc. All rights reserved.

Glycerophosphocholine metabolism in higher plant cells. Evidence of a new glyceryl-phosphodiester phosphodiesterase.

PubMed

van der Rest, Benoît; Boisson, Anne-Marie; Gout, Elisabeth; Bligny, Richard; Douce, Roland

2002-09-01

Glycerophosphocholine (GroPCho) is a diester that accumulates in different physiological processes leading to phospholipid remodeling. However, very little is known about its metabolism in higher plant cells. (31)P-Nuclear magnetic resonance spectroscopy and biochemical analyses performed on carrot (Daucus carota) cells fed with GroPCho revealed the existence of an extracellular GroPCho phosphodiesterase. This enzymatic activity splits GroPCho into sn-glycerol-3-phosphate and free choline. In vivo, sn-glycerol-3-phosphate is further hydrolyzed into glycerol and inorganic phosphate by acid phosphatase. We visualized the incorporation and the compartmentation of choline and observed that the major choline pool was phosphorylated and accumulated in the cytosol, whereas a minor fraction was incorporated in the vacuole as free choline. Isolation of plasma membranes, culture medium, and cell wall proteins enabled us to localize this phosphodiesterase activity on the cell wall. We also report the existence of an intracellular glycerophosphodiesterase. This second activity is localized in the vacuole and hydrolyzes GroPCho in a similar fashion to the cell wall phosphodiesterase. Both extra- and intracellular phosphodiesterases are widespread among different plant species and are often enhanced during phosphate deprivation. Finally, competition experiments on the extracellular phosphodiesterase suggested a specificity for glycerophosphodiesters (apparent K(m) of 50 microM), which distinguishes it from other phosphodiesterases previously described in the literature.

Isolation and characterization of a Treponema pallidum major 60-kilodalton protein resembling the groEL protein of Escherichia coli.

PubMed Central

Houston, L S; Cook, R G; Norris, S J

1990-01-01

A native structure containing the major 60-kilodalton common antigen polypeptide (designated TpN60) was isolated from Treponema pallidum subsp. pallidum (Nichols strain) through a combination of differential centrifugation and sucrose density gradient sedimentation. Gel filtration chromatography indicated that this structure is a high-molecular-weight homo-oligomer of TpN60. Antisera to TpN60 reacted with the groEL polypeptide of Escherichia coli, as determined by immunoperoxidase staining of two-dimensional electroblots. Electron microscopy of the isolated complex revealed a ringlike structure with a diameter of approximately 16 nm which was very similar in appearance to the groEL protein. Comparison of the N-terminal amino acid sequence of TpN60 with the deduced sequences of the E. coli groEL protein, related chaperonin proteins from mycobacteria and Coxiella burnetti, the hsp60 protein of Saccharomyces cerevisiae, the wheat ribulose bisphosphate carboxylase-oxygenase-subunit-binding protein (alpha subunit), and the human P1 mitochondrial protein indicated sequence identity at 8 of 22 to 10 of 22 residues (36 to 45% identity). We conclude that the oligomer of TpN60 is homologous to the groEL protein and related chaperonins found in a wide variety of procaryotes and eucaryotes and thus may represent a heat shock protein involved in protein folding and assembly. Images PMID:1971618

HIREGS observations of the Galactic center and Galactic plane: Separation of the diffuse Galactic hard X-ray continuum from the point source spectra

NASA Technical Reports Server (NTRS)

Boggs, S. E.; Lin, R. P.; Coburn, W.; Feffer, P.; Pelling, R. M.; Schroeder, P.; Slassi-Sennou, S.

1997-01-01

The balloon-borne high resolution gamma ray and X-ray germanium spectrometer (HIREGS) was used to observe the Galactic center and two positions along the Galactic plane from Antarctica in January 1995. For its flight, the collimators were configured to measure the Galactic diffuse hard X-ray continuum between 20 and 200 keV by directly measuring the point source contributions to the wide field of view flux for subtraction. The hard X-ray spectra of GX 1+4 and GRO J1655-40 were measured with the diffuse continuum subtracted off. The analysis technique for source separation is discussed and the preliminary separated spectra for these point sources and the Galactic diffuse emission are presented.

Gamma-ray burst spectroscopy capabilities of the BATSE/GRO experiment

NASA Technical Reports Server (NTRS)

Matteson, J. L.; Fishman, G. J.; Meegan, C. A.; Parnell, T. A.; Wilson, R. B.; Paciesas, W.; Cline, T. L.; Teegarden, B. J.

1985-01-01

A scintillation spectrometer is included in each of the eight BATSE/GRO detector modules, resulting in all-sky coverage for gamma-ray bursts. The scientific motivation, design and capabilities of these spectrometers for performing spectral observations over a wide range of gamma-ray energies and burst intensities are described.

A simple-source model of military jet aircraft noise

NASA Astrophysics Data System (ADS)

Morgan, Jessica; Gee, Kent L.; Neilsen, Tracianne; Wall, Alan T.

2010-10-01

The jet plumes produced by military jet aircraft radiate significant amounts of noise. A need to better understand the characteristics of the turbulence-induced aeroacoustic sources has motivated the present study. The purpose of the study is to develop a simple-source model of jet noise that can be compared to the measured data. The study is based off of acoustic data collected near a tied-down F-22 Raptor. The simplest model consisted of adjusting the origin of a monopole above a rigid planar reflector until the locations of the predicted and measured interference nulls matched. The model has developed into an extended Rayleigh distribution of partially correlated monopoles which fits the measured data from the F-22 significantly better. The results and basis for the model match the current prevailing theory that jet noise consists of both correlated and uncorrelated sources. In addition, this simple-source model conforms to the theory that the peak source location moves upstream with increasing frequency and lower engine conditions.

Dynamical Evolution of the Recent Jet in CH Cyg

NASA Astrophysics Data System (ADS)

Karovska, Margarita

2011-10-01

We propose to carry out Chandra ACIS-S observations combined with HST/WFC3multi-wavelength imaging of the powerful, multi-component jet which was detectedin 2008 in the nearby symbiotic CH Cyg. CH Cyg is a fascinating system containing an evolved giant and a wind-accreting white dwarf, and it is one of the few symbiotics showing jet activity, especially in X-rays. Our goal is to measure the physical characteristics of the individual jet components, from the central source to the region of interaction with the circumbinary environment, reaching to within a few AU from the source of the jet. We will determine the characteristics of the central source, and of the inner and the outer jet, and the dynamical evolution, including precession, and kinematics of the ejecta.

Dynamical Evolution of the Recent Jet in CH Cyg

NASA Astrophysics Data System (ADS)

Karovska, Margarita

2011-09-01

We propose to carry out Chandra ACIS-S observations combined with HST/WFC3 multi-wavelength imaging of the powerful, multi-component jet which was detected in 2008 in the nearby symbiotic CH Cyg. CH Cyg is a fascinating system containing an evolved giant and a wind-accreting white dwarf, and it is one of the few symbiotics showing jet activity, especially in X-rays. Our goal is to measure the physical characteristics of the individual jet components, from the central source to the region of interaction with the circumbinary environment, reaching to within a few AU from the source of the jet. We will determine the characteristics of the central source, and of the inner and the outer jet, and the dynamical evolution, including precession, and kinematics of the ejecta.

Reproducible surface-enhanced Raman quantification of biomarkers in multicomponent mixtures.

PubMed

De Luca, Anna Chiara; Reader-Harris, Peter; Mazilu, Michael; Mariggiò, Stefania; Corda, Daniela; Di Falco, Andrea

2014-03-25

Direct and quantitative detection of unlabeled glycerophosphoinositol (GroPIns), an abundant cytosolic phosphoinositide derivative, would allow rapid evaluation of several malignant cell transformations. Here we report label-free analysis of GroPIns via surface-enhanced Raman spectroscopy (SERS) with a sensitivity of 200 nM, well below its apparent concentration in cells. Crucially, our SERS substrates, based on lithographically defined gold nanofeatures, can be used to predict accurately the GroPIns concentration even in multicomponent mixtures, avoiding the preliminary separation of individual compounds. Our results represent a critical step toward the creation of SERS-based biosensor for rapid, label-free, and reproducible detection of specific molecules, overcoming limits of current experimental methods.

Novel fluorescent labelled affinity probes for diadenosine-5',5'''-P1,P4-tetraphosphate (Ap4A)-binding studies.

PubMed

Wright, Michael; Miller, Andrew D

2006-02-15

Tandem synthetic-biosynthetic procedures were used to prepare two novel fluorescent labelled affinity probes for diadenosine-5',5'''-P1,P4-tetraphosphate (Ap4A)-binding studies. These compounds (dial-mant-Ap4A and azido-mant-Ap4A) are shown to clearly distinguish known Ap4A-binding proteins from Escherichia coli (LysU and GroEL) and a variety of other control proteins. Successful labelling of chaperonin GroEL appears to be allosteric with respect to the well-characterized adenosine 5'-triphosphate (ATP)-binding site, suggesting that GroEL possesses a distinct Ap4A-binding site.

Very high energy gamma ray extension of GRO observations

NASA Technical Reports Server (NTRS)

Weekes, Trevor C.

1992-01-01

This has been an exiciting year for high energy gamma-ray astronomy, both from space and from ground-based observatories. It has been a particularly active period for the Whipple Observatory gamma-ray group. In phase 1 of the Compton Gamma Ray Observatory (GRO), there has not been too much opportunity for overlapping observations with the Energetic Gamma Ray Experiment Telescope (EGRET) and the other GRO telescopes; however, significant progress was made in the development of data analysis techniques and in improving the sensitivity of the technique which will have direct application in correlative observations in phase 2. Progress made during the period 1 Jul. 1991 - 31 Dec. 1991 is presented.

Development and validation of a hydrophilic interaction liquid chromatography-tandem mass spectrometry method for the quantification of lipid-related extracellular metabolites in Saccharomyces cerevisiae.

PubMed

Sun, Tao; Wetzel, Stephanie J; Johnson, Mitchell E; Surlow, Beth A; Patton-Vogt, Jana

2012-05-15

A highly sensitive hydrophilic interaction liquid chromatography-tandem mass spectrometry (HILIC-MS/MS) method was developed and validated for the quantification of glycerophosphoinositol (GroPIns), glycerophosphocholine (GroPCho), glycerol 3-phosphate (GroP), inositol, and choline in the extracellular medium of Saccharomyces cerevisiae. The media samples were pretreated with a single two-phase liquid extraction. Chromatographic separation was achieved on a Waters Xbridge HILIC (150 mm × 4.6 mm, 5 μm) column under isocratic conditions using a mobile phase composed of acetonitrile/water, 70:30 (v/v) with 10mM ammonium acetate (pH adjusted to 4.5) at a flow-rate of 0.5 mL/min. Using a triple quadrupole tandem mass spectrometer, samples were detected in multiple reaction monitoring (MRM) mode via an electrospray ionization (ESI) source. The calibration curves were linear (r² ≥ 0.995) over the range of 0.5-150 nM, with the lower limit of quantitation validated at 0.5 nM for all analytes. The intra- and inter-day precision (calculated by coefficient of variation, CV%) ranged from 1.24 to 5.88% and 2.46 to 9.77%, respectively, and intra- and inter-day accuracy (calculated by relative error, RE%) was between -8.42 to 8.22% and -9.35 to 6.62%, respectively, at all quality control levels. The extracellular metabolites were stable throughout various storage stability studies. The fully validated method was successfully applied to determine the extracellular levels of phospholipid-related metabolites in S. cerevisiae. Copyright © 2012 Elsevier B.V. All rights reserved.

76 FR 39812 - Scotts Miracle-Gro Co.; Regulatory Status of Kentucky Bluegrass Genetically Engineered for...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-07

...] Scotts Miracle-Gro Co.; Regulatory Status of Kentucky Bluegrass Genetically Engineered for Herbicide... engineered for herbicide tolerance without the use of plant pest components, does not meet the definition of... has been genetically engineered for herbicide tolerance, does not meet the definition of a regulated...

Revisit to the RXTE and ASCA Data for GRO J1655-40: Effects of Radiative Transfer in Corona and Color Hardening in the Disk

NASA Technical Reports Server (NTRS)

Zhang, S. Nan; Zhang, Xiaoling; Wu, Xuebing; Yao, Yangsen; Sun, Xuejun; Xu, Haiguang; Cui, Wei; Chen, Wan; Harmon, B. A.; Robinson, C. R.

1999-01-01

The results of spectral modeling of the data for a series of RXTE observations and four ASCA observations of GRO J1655-40 are presented. The thermal Comptonization model is used instead of the power-law model for the hard component of the two-component continuum spectra. The previously reported dramatic variations of the apparent inner disk radius of GRO J1655-40 during its outburst may be due to the inverse Compton scattering in the hot corona. A procedure is developed for making the radiative transfer correction to the fitting parameters from RXTE data and a more stable inner disk radius is obtained. A practical process of determining the color correction (hardening) factor from observational data is proposed and applied to the four ASCA observations of GRO J1655-40. We found that the color correction factor may vary significantly between different observations and the finally corrected physical inner disk radius remains reasonably stable over a large range of luminosity and spectral states.

Identification of a new diagnostic antigen for glanders using immunoproteome analysis.

PubMed

Dohre, Sudhir K; Kamthan, Aayushi; Singh, Sandeep; Alam, Syed Imteyaz; Kumar, Subodh

2017-08-01

Glanders is a disease of horses, donkeys and mules. The causative agent Burkholderia mallei, is a biorisk group 3 pathogen and is also a biothreat agent. Simple and rapid diagnostic tool is essential for control of glanders. Using a proteomic approach and immunoblotting with equine sera, we identified 12 protein antigens that may have diagnostic potential. Various immunoreactive proteins e.g. GroEL, translation elongation factor Tu, elongation factor Ts, arginine deiminase, malate dehydrogenase, DNA directed RNA polymerase subunit alpha were identified on 2-dimentional immunoblots. One of these proteins, GroEL, was cloned and expressed in E. coli and purified using Ni-NTA affinity chromatography. The recombinant GroEL protein was evaluated in ELISA format on a panel of glanders positive (n=49) and negative (n=79) equine serum samples to determine its diagnostic potential. The developed ELISA had a sensitivity and specificity of 96 and 98.7% respectively. The results of this study highlight the potential of GroEL in serodiagnosis of glanders. Copyright © 2017 Elsevier Ltd. All rights reserved.

Thermal inactivation and chaperonin-mediated renaturation of mitochondrial aspartate aminotransferase.

PubMed Central

Lawton, J M; Doonan, S

1998-01-01

Mitochondrial aspartate aminotransferase is inactivated irreversibly on heating. The inactivated protein aggregates, but aggregation is prevented by the presence of the chaperonin 60 from Escherichia coli (GroEL). The chaperonin increases the rate of thermal inactivation in the temperature range 55-65 degrees C but not at lower temperatures. It has previously been shown [Twomey and Doonan (1997) Biochim. Biophys. Acta 1342, 37-44] that the enzyme switches to a modified, but catalytically active, conformation at approx. 55-60 degrees C and the present results show that this conformation is recognized by and binds to GroEL. The thermally inactivated protein can be released from GroEL in an active form by the addition of chaperonin 10 from E. coli (GroES)/ATP, showing that inactivation is not the result of irreversible chemical changes. These results suggest that the irreversibility of thermal inactivation is due to the formation of an altered conformation with a high kinetic barrier to refolding rather than to any covalent changes. In the absence of chaperonin the unfolded molecules aggregate but this is a consequence, rather than the cause, of irreversible inactivation. PMID:9693123

Flagellin and GroEL mediates in vitro binding of an atypical enteropathogenic Escherichia coli to cellular fibronectin.

PubMed

Moraes, Claudia T P; Polatto, Juliana M; Rossato, Sarita S; Izquierdo, Mariana; Munhoz, Danielle D; Martins, Fernando H; Pimenta, Daniel C; Farfan, Mauricio J; Elias, Waldir P; Barbosa, Ângela S; Piazza, Roxane M F

2015-12-18

Enteropathogenic Escherichia coli (EPEC) is distinguished mainly by the presence of EPEC adherence factor plasmid (pEAF) in typical EPEC (tEPEC) and its absence in atypical EPEC (aEPEC). The initial adherence to the intestinal mucosa is complex and mediated by adhesins other than bundle-forming pilus, which is not produced by aEPEC. Extracellular matrix (ECM) proteins of eukaryotic cells are commonly recognized by bacterial adhesins. Therefore, binding to ECM proteins may facilitate colonization, invasion and/or signaling by intestinal pathogens. Previous studies from our group demonstrated that aEPEC O26:H11 (strain BA2103) showed high binding activity to fibronectin, not shared by its counterpart, aEPEC O26:HNM. In the present study, using mass spectrometry after fibronectin-associated immunoprecipitation, two proteins, flagellin (50 kDa) and GroEL (52 kDa), were identified and BA2103 binding ability to fibronectin was inhibited in the presence of anti-H11 and anti-GroEL sera, but not by either naïve rabbit or other unrelated sera. It was also observed that the presence of purified flagellin inhibits adhesion of BA2103 to cellular fibronectin in a dose-dependent manner. Additionally, BA2103 GroEL is similar to the same protein of uropathogenic E. coli. Our results suggest that flagellin may play a role in the in vitro interaction of BA2103 with cellular fibronectin, and GroEL can be an accessory protein in this process.

Protein folding on Biosensor tips: Folding of Maltodextrin glucosidase monitored by its interactions with GroEL

PubMed Central

Pastor, Ashutosh; Singh, Amit K.; Fisher, Mark T.; Chaudhuri, Tapan K.

2016-01-01

Protein folding has been extensively studied for past four decades by employing solution based experiments such as solubility, enzymatic activity, secondary structure analysis, and analytical methods like FRET, NMR and HD exchange. However, for rapid analysis of the folding process, solution based approaches are often plagued with aggregation side reactions resulting in poor yields. In this work we demonstrate that a Bio-Layer Interferometry (BLI) chaperonin detection system can be potentially applied to identify superior refolding conditions for denatured proteins. The degree of immobilized protein folding as a function of time can be detected by monitoring the binding of the high-affinity nucleotide-free form of the chaperonin GroEL. GroEL preferentially interacts with proteins that have hydrophobic surfaces exposed in their unfolded or partially folded form so a decrease in GroEL binding can be correlated with burial of hydrophobic surfaces as folding progresses. The magnitude of GroEL binding to the protein immobilized on Bio-layer interferometry biosensor inversely reflects the extent of protein folding and hydrophobic residue burial. We demonstrate conditions where accelerated folding can be observed for the aggregation prone protein Maltodextrin glucosidase (MalZ). Superior immobilized folding conditions identified on the Bio-layer interferometry biosensor surface were reproduced on Ni-NTA sepharose bead surfaces and resulted in significant improvement in folding yields of released MalZ (measured by enzymatic activity) compared to bulk refolding conditions in solution. PMID:27367928

Common structural features of toxic intermediates from α-synuclein and GroES fibrillogenesis detected using cryogenic coherent X-ray diffraction imaging.

PubMed

Kameda, Hiroshi; Usugi, Sayaka; Kobayashi, Mana; Fukui, Naoya; Lee, Seki; Hongo, Kunihiro; Mizobata, Tomohiro; Sekiguchi, Yuki; Masaki, Yu; Kobayashi, Amane; Oroguchi, Tomotaka; Nakasako, Masayoshi; Takayama, Yuki; Yamamoto, Masaki; Kawata, Yasushi

2017-01-01

The aggregation and deposition of α-synuclein (αSyn) in neuronal cells is correlated to pathogenesis of Parkinson's disease. Although the mechanism of αSyn aggregation and fibril formation has been studied extensively, the structural hallmarks that are directly responsible for toxicity toward cells are still under debate. Here, we have compared the structural characteristics of the toxic intermediate molecular species of αSyn and similar toxic species of another protein, GroES, using coherent X-ray diffraction analysis. Using coherent X-ray free electron laser pulses of SACLA, we analysed αSyn and GroES fibril intermediate species and characterized various aggregate structures. Unlike previous studies where an annular oligomeric form of αSyn was identified, particle reconstruction from scattering traces suggested that the specific forms of the toxic particles were varied, with the sizes of the particles falling within a specific range. We did however discover a common structural feature in both αSyn and GroES samples; the edges of the detected particles were nearly parallel and produced a characteristic diffraction pattern in the diffraction experiments. The presence of parallel-edged particles in toxic intermediates of αSyn and GroES fibrillogenesis pointed towards a plausible common molecular interface that leads to the formation of mature fibrils. © The Authors 2016. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.

groEL is a suitable genetic marker for detecting Vibrio parahaemolyticus by loop-mediated isothermal amplification assay.

PubMed

Siddique, M P; Jang, W J; Lee, J M; Ahn, S H; Suraiya, S; Kim, C H; Kong, I S

2017-08-01

A groEL gene-based loop-mediated isothermal amplification (LAMP) assay was developed to detect Vibrio parahaemolyticus in contaminated seafood and water. The assay was optimized and conducted at 63°C for 40 min using Bacillus stearothermophilus (Bst) DNA polymerase, large fragment. Amplification was analysed via multiple detection methods, including opacity, formation of white precipitate, DNA intercalating dyes (ethidium bromide and SYBR Green I), metal ion-binding indicator dye, calcein, and 2% agarose gel electrophoresis. A characteristic ladder-like band pattern on agarose gel and the desired colour changes when using different dyes were observed in positive cases, and these were species-specific for V. parahaemolyticus when compared with other closely related Vibrio spp. The limit of detection (LoD) of this assay was 100 fg per reaction, 100-fold higher than that for conventional polymerase chain reaction (PCR). When tested on artificially contaminated seafood and seawater, the LoDs of the LAMP assay were 120 and 150 fg per reaction respectively, and those of conventional PCR were 120 and 150 pg per reaction respectively. Based on our results, the groEL gene-based LAMP assay is rapid, specific, sensitive, and reliable for detecting V. parahaemolyticus, and it could be used in field diagnosis. The loop-mediated isothermal amplification (LAMP) assay using groEL gene (an abundant, highly conserved gene and member of the groESL chaperone gene family) provided rapid, species-specific and highly sensitive method for detecting Vibrio parahaemolyticus, the leading causal agent of seafood-borne diseases worldwide. Moreover, groEL LAMP revealed high efficiency than conventional PCR assay for V. parahaemolyticus using template both from pure culture and artificially contaminated seafood and water, which indicated the applicability in the field and environmental screening purpose for the organism. © 2017 The Society for Applied Microbiology.

Mice immunized with bone marrow-derived dendritic cells stimulated with recombinant Coxiella burnetii Com1 and Mip demonstrate enhanced bacterial clearance in association with a Th1 immune response.

PubMed

Xiong, Xiaolu; Meng, Yanfen; Wang, Xile; Qi, Yong; Li, Jiaming; Duan, Changsong; Wen, Bohai

2012-11-06

The recombinant membrane-associated proteins of Coxiella burnetii, Com1, Mip and GroEL, were used in vitro to stimulate BALB/c mouse bone marrow-derived dendritic cells (BMDCs). The antigen-activated BMDCs were transferred into naïve BALB/c mice. Seven days after challenge of C. burnetii, the bacterial loads of mice receiving BMDCs activated with Com1 or Mip, but not GroEL, were significantly lower than that of mice receiving BMDCs pulsed with TrxA (Esherichia coli thioredoxin) in a quantitative polymerase chain reaction assay. After in vitro interaction with cognate antigen-pulsed BMDCs, the percentages of CD69-positive cells and TNF-α-positive cells in CD4(+) and CD8(+) T cells isolated from the spleens of mice receiving Com1-, Mip-, or GroEL-pulsed BMDCs were significantly higher than that of mice receiving mock-pulsed BMDCs in flow cytometric analysis. The percentages of IFN-γ-positive cells in CD4(+) and CD8(+) T cells from mice receiving Com1- or Mip-pulsed BMDCs were significantly greater than that of mice receiving GroEL-pulsed BMDCs. However, the percentage of IL-4-positive cells in CD4(+) T cells of mice receiving GroEL-pulsed BMDCs was obviously higher than that of mice receiving Com1- or Mip-pulsed BMDCs. Our results demonstrate that Com1 and Mip are protective antigens and strongly indicate that they favor to induce IFN-γ-producing Th1 and Tc1 cells, whereas the non-protective antigen GroEL is biased to induce a Th2 response. Therefore, Com1 and Mip are key antigens to induce a protective immune response against C. burnetii infection. Copyright © 2012 Elsevier Ltd. All rights reserved.

High-Speed Jet Noise Reduction NASA Perspective

NASA Technical Reports Server (NTRS)

Huff, Dennis L.; Handy, J. (Technical Monitor)

2001-01-01

History shows that the problem of high-speed jet noise reduction is difficult to solve. the good news is that high performance military aircraft noise is dominated by a single source called 'jet noise' (commercial aircraft have several sources). The bad news is that this source has been the subject of research for the past 50 years and progress has been incremental. Major jet noise reduction has been achieved through changing the cycle of the engine to reduce the jet exit velocity. Smaller reductions have been achieved using suppression devices like mixing enhancement and acoustic liners. Significant jet noise reduction without any performance loss is probably not possible! Recent NASA Noise Reduction Research Programs include the High Speed Research Program, Advanced Subsonic Technology Noise Reduction Program, Aerospace Propulsion and Power Program - Fundamental Noise, and Quiet Aircraft Technology Program.

Probing jets from young embedded sources

NASA Astrophysics Data System (ADS)

Nisini, Brunella

2017-08-01

Jets are intimately related to the process of star formation and disc accretion. Our present knowledge of this key ingredient in protostars mostly relies on observations of optical jets from T Tauri stars, where the original circumstellar envelope has been already cleared out. However, to understand how jets are originally formed and how their properties evolve with time, detailed observations of young accreting protostars, i.e. the class 0/I sources, are mandatory. The study of class0/I jets will be revolutionised by JWST, able to penetrate protostars dusty envelopes with unprecedented sensitivity and resolution. However, complementary information on parameters inferred from lines in different excitation regimes, for at least a representative sample of a few bright sources, is essential for a correct interpretation of the JWST results. Here we propose to observe four prototype bright jets from class0/I sources with the WFC3 in narrow band filters in order to acquire high angular resolution images in the [OI]6300A, [FeII]1.25 and [FeII]1.64um lines. These images will be used to: 1) provide accurate extinction maps of the jets that will be an important archival reference for any future observation on these jets. 2) measure key parameters as the mass flux, the iron abundance and the jet collimation on the hot gas component of the jets. These information will provide an invaluable reference frame for a comparison with similar parameters measured by JWST in a different gas regime. In addition, these observations will allow us to confront the properties of class 0/I jets with those of the more evolved T Tauri stars.

Small Hot Jet Acoustic Rig Validation

NASA Technical Reports Server (NTRS)

Brown, Cliff; Bridges, James

2006-01-01

The Small Hot Jet Acoustic Rig (SHJAR), located in the Aeroacoustic Propulsion Laboratory (AAPL) at the NASA Glenn Research Center in Cleveland, Ohio, was commissioned in 2001 to test jet noise reduction concepts at low technology readiness levels (TRL 1-3) and develop advanced measurement techniques. The first series of tests on the SHJAR were designed to prove its capabilities and establish the quality of the jet noise data produced. Towards this goal, a methodology was employed dividing all noise sources into three categories: background noise, jet noise, and rig noise. Background noise was directly measured. Jet noise and rig noise were separated by using the distance and velocity scaling properties of jet noise. Effectively, any noise source that did not follow these rules of jet noise was labeled as rig noise. This method led to the identification of a high frequency noise source related to the Reynolds number. Experiments using boundary layer treatment and hot wire probes documented this noise source and its removal, allowing clean testing of low Reynolds number jets. Other tests performed characterized the amplitude and frequency of the valve noise, confirmed the location of the acoustic far field, and documented the background noise levels under several conditions. Finally, a full set of baseline data was acquired. This paper contains the methodology and test results used to verify the quality of the SHJAR rig.

Infrasonic crackle and supersonic jet noise from the eruption of Nabro Volcano, Eritrea

NASA Astrophysics Data System (ADS)

Fee, David; Matoza, Robin S.; Gee, Kent L.; Neilsen, Tracianne B.; Ogden, Darcy E.

2013-08-01

The lowermost portion of an explosive volcanic eruption column is considered a momentum-driven jet. Understanding volcanic jets is critical for determining eruption column dynamics and mitigating volcanic hazards; however, volcanic jets are inherently difficult to observe due to their violence and opacity. Infrasound from the 2011 eruption of Nabro Volcano, Eritrea has waveform features highly similar to the "crackle" phenomenon uniquely produced by man-made supersonic jet engines and rockets and is characterized by repeated asymmetric compressions followed by weaker, gradual rarefactions. This infrasonic crackle indicates that infrasound source mechanisms in sustained volcanic eruptions are strikingly similar to jet noise sources from heated, supersonic jet engines and rockets, suggesting that volcanologists can utilize the modeling and physical understandings of man-made jets to understand volcanic jets. The unique, distinctive infrasonic crackle from Nabro highlights the use of infrasound to remotely detect and characterize hazardous eruptions and its potential to determine volcanic jet parameters.

AGN jet power, formation of X-ray cavities, and FR I/II dichotomy in galaxy clusters

NASA Astrophysics Data System (ADS)

Fujita, Yutaka; Kawakatu, Nozomu; Shlosman, Isaac

2016-04-01

We investigate the ability of jets in active galactic nuclei to break out of the ambient gas with sufficiently large advance velocities. Using observationally estimated jet power, we analyze 28 bright elliptical galaxies in nearby galaxy clusters. Because the gas density profiles in the innermost regions of galaxies have not been resolved so far, we consider two extreme cases for temperature and density profiles. We also follow two types of evolution for the jet cocoons: being driven by the pressure inside the cocoon [Fanaroff-Riley (FR) type I], and being driven by the jet momentum (FR type II). Our main result is that regardless of the assumed form of the density profiles, jets with observed powers of ≲1044 erg s-1 are not powerful enough to evolve as FR II sources. Instead, they evolve as FR I sources and appear to be decelerated below the buoyant velocities of the cocoons when jets were propagating through the central dense regions of the host galaxies. This explains why FR I sources are more frequent than FR II sources in clusters. Furthermore, we predict the sizes of X-ray cavities from the observed jet powers and compare them with the observed ones-they are consistent within a factor of two if the FR I type evolution is realized. Finally, we find that the jets with a power ≳1044 erg s-1 are less affected by the ambient medium, and some of them, but not all, could serve as precursors of the FR II sources.

Prediction of the Acoustic Field Associated with Instability Wave Source Model for a Compressible Jet

NASA Technical Reports Server (NTRS)

Golubev, Vladimir; Mankbadi, Reda R.; Dahl, Milo D.; Kiraly, L. James (Technical Monitor)

2002-01-01

This paper provides preliminary results of the study of the acoustic radiation from the source model representing spatially-growing instability waves in a round jet at high speeds. The source model is briefly discussed first followed by the analysis of the produced acoustic directivity pattern. Two integral surface techniques are discussed and compared for prediction of the jet acoustic radiation field.

The Inverse Problem in Jet Acoustics

NASA Technical Reports Server (NTRS)

Wooddruff, S. L.; Hussaini, M. Y.

2001-01-01

The inverse problem for jet acoustics, or the determination of noise sources from far-field pressure information, is proposed as a tool for understanding the generation of noise by turbulence and for the improved prediction of jet noise. An idealized version of the problem is investigated first to establish the extent to which information about the noise sources may be determined from far-field pressure data and to determine how a well-posed inverse problem may be set up. Then a version of the industry-standard MGB code is used to predict a jet noise source spectrum from experimental noise data.

ALMA Studies of the Disk-Jet-Outflow Connection

NASA Astrophysics Data System (ADS)

Dougados, Catherine; Louvet, F.; Mardones, D.; Cabrit, S.

2017-06-01

I will describe in this contribution recent results obtained with ALMA on the origin of the disk/jet/outflow connexion in T Tauri stars. I will first present ALMA observations of the disk associated with the jet source Th 28, which question previous jet rotation measurements in this source and the implications drawn from them. I will then discuss Cycle 2 ALMA observations of the disk and small scale CO outflow associated with the prototypical edge-on HH 30 source. The unprecedented angular resolution of this dataset brings new constraints on the origin of the CO outflows in young stars.

Radio jet refraction in galactic atmospheres with static pressure gradients

NASA Technical Reports Server (NTRS)

Henriksen, R. N.; Vallee, J. P.; Bridle, A. H.

1981-01-01

A theory based on the refraction of radio jets in the extended atmosphere of an elliptical galaxy, is proposed for double radio sources with a Z or S morphology. The model describes a collimated jet of supersonic material that bends self-consistently under the influence of external static pressure gradients, and may alternatively be seen as a continuous-jet version of the buoyancy model proposed by Gull (1973). Emphasis is placed on (1) S-shaped radio sources identified with isolated galaxies, such as 3C 293, whose radio structures should be free of distortions resulting from motion relative to a cluster medium, and (2) small-scale, galaxy-dominated rather than environment-dominated S-shaped sources such as the inner jet structure of Fornax A.

Assessing Academic Risk of Student-Athletes: Applicability of the NCAA Graduation Risk Overview Model to GPA

ERIC Educational Resources Information Center

Johnson, James

2013-01-01

In an effort to standardize academic risk assessment, the NCAA developed the graduation risk overview (GRO) model. Although this model was designed to assess graduation risk, its ability to predict grade-point average (GPA) remained unknown. Therefore, 134 individual risk assessments were made to determine GRO model effectiveness in the…

GRoW Buffalo Final Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bohm, Martha

This document provides final reporting on the GRoW Home, University at Buffalo's entry to the 2015 Solar Decathlon competition in Irvine, CA. The report summarizes fundraising efforts, documents media outreach, lists online presence, analyzes the organizer's communication, describes post-competition life of the house and future employment plans for student team members. Last, it suggests improvements for future decathlons.

ACCELERATION OF COMPACT RADIO JETS ON SUB-PARSEC SCALES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee, Sang-Sung; Lobanov, Andrei P.; Krichbaum, Thomas P.

2016-08-01

Jets of compact radio sources are highly relativistic and Doppler boosted, making studies of their intrinsic properties difficult. Observed brightness temperatures can be used to study the intrinsic physical properties of relativistic jets, and constrain models of jet formation in the inner jet region. We aim to observationally test such inner jet models. The very long baseline interferometry (VLBI) cores of compact radio sources are optically thick at a given frequency. The distance of the core from the central engine is inversely proportional to the frequency. Under the equipartition condition between the magnetic field energy and particle energy densities, themore » absolute distance of the VLBI core can be predicted. We compiled the brightness temperatures of VLBI cores at various radio frequencies of 2, 8, 15, and 86 GHz. We derive the brightness temperature on sub-parsec scales in the rest frame of the compact radio sources. We find that the brightness temperature increases with increasing distance from the central engine, indicating that the intrinsic jet speed (the Lorentz factor) increases along the jet. This implies that the jets are accelerated in the (sub-)parsec regions from the central engine.« less

Separating Turbofan Engine Noise Sources Using Auto and Cross Spectra from Four Microphones

NASA Technical Reports Server (NTRS)

Miles, Jeffrey Hilton

2008-01-01

The study of core noise from turbofan engines has become more important as noise from other sources such as the fan and jet were reduced. A multiple-microphone and acoustic-source modeling method to separate correlated and uncorrelated sources is discussed. The auto- and cross spectra in the frequency range below 1000 Hz are fitted with a noise propagation model based on a source couplet consisting of a single incoherent monopole source with a single coherent monopole source or a source triplet consisting of a single incoherent monopole source with two coherent monopole point sources. Examples are presented using data from a Pratt& Whitney PW4098 turbofan engine. The method separates the low-frequency jet noise from the core noise at the nozzle exit. It is shown that at low power settings, the core noise is a major contributor to the noise. Even at higher power settings, it can be more important than jet noise. However, at low frequencies, uncorrelated broadband noise and jet noise become the important factors as the engine power setting is increased.

From the Blazar Sequence to the Blazar Envelope: Revisiting the Relativistic Jet Dichotomy in Radio-Loud AGN

NASA Technical Reports Server (NTRS)

Meyer, Eileen T.; Fossati, Giovanini; Georganopoulos, Markos; Lister, Matthew L.

2012-01-01

We revisit the concept of a blazar sequence that relates the synchrotron peak frequency (Vpeak) in blazars with synchrotron peak luminosity (Lpeak, in vLv) using a large sample of radio-loud AGN. We present observational evidence that the blazar sequence is formed from two populations in the synchrotron Vpeak - Lpeak plane, each forming an upper edge to an envelope of progressively misaligned blazars, and connecting to an adjacent group of radio galaxies having jets viewed at much larger angles to the line of sight. When binned by jet kinetic power (Lkin; as measured through a scaling relationship with extended radio power), we find that radio core dominance decreases with decreasing synchrotron Lpeak, revealing that sources in the envelope are generally more misaligned. We find population-based evidence of velocity gradients in jets at low kinetic powers (approximately 10(exp 42) - 10(exp 44.5) erg s(exp -1)), corresponding to FR I radio galaxies and most BL Lacs. These low jet power 'weak jet' sources, thought to exhibit radiatively inefficient accretion, are distinguished from the population of non-decelerating, low synchrotron-peaking (LSP) blazars and FR II radio galaxies ('strong' jets) which are thought to exhibit radiatively efficient accretion. The two-population interpretation explains the apparent contradiction of the existence of highly core-dominated, low-power blazars at both low and high synchrotron peak frequencies, and further implies that most intermediate synchrotron peak (ISP) sources are not intermediate in intrinsic jet power between LSP and high synchrotron-peaking (HSP) sources, but are more misaligned versions of HSP sources with similar jet powers.

X-Ray Observations of High-Energy Pulsars: PSR B1951+32 and Geminga

NASA Astrophysics Data System (ADS)

Ho, Cheng

Observations at frequencies across a wide range of electromagnetic spectra are key to the understanding of the origin and mechanisms of high-energy emissions from pulsars. We propose to observe the high-energy pulsars PSR B1951+32 and Geminga with XTE. These two sources emit X-rays at low enough count rate that we can acquire high resolution timing and spectral data, allowing us to perform detailed analysis on the ground. Staring integration of 10 ksec for each source is requested. Data obtained in these observations, together with those from ROSAT, GRO and a planned project for optical counterpart study at Los Alamos, will provide crucial information to advance high-energy pulsar research.

Observations of a gamma-ray burst and other sources with a large-area, balloon-borne detector

NASA Technical Reports Server (NTRS)

Wilson, R. B.; Fishman, G. J.; Meegan, C. A.

1982-01-01

Observations of a weak cosmic gamma ray burst of integrated intensity 2 x 10 to the -6th erg/sq cm, two solar flare events, and pulsed emission profiles of A0535+26 and NP0532 are reported for several energy intervals in the energy range from 45 to 520 keV. The measurements were made with a NaI(Tl) detector array flown on a balloon to 4 g/sq cm residual atmosphere from Palestine, Texas, on October 6-8, 1980, for 28 hours. The detector is a prototype of the Burst and Transient Source Experiment (BATSE) to be flown on the Gamma-Ray Observatory (GRO).

Nucleolin inhibitor GroA triggers reduction in epidermal growth factor receptor activation: Pharmacological implication for glial scarring after spinal cord injury.

PubMed

Goldshmit, Yona; Schokoroy Trangle, Sari; Afergan, Fabian; Iram, Tal; Pinkas-Kramarski, Ronit

2016-09-01

Glial scarring, formed by reactive astrocytes, is one of the major impediments for regeneration after spinal cord injury (SCI). Reactive astrocytes become hypertrophic, proliferate and secrete chondroitin sulphate proteoglycans into the extracellular matrix (ECM). Many studies have demonstrated that epidermal growth factor receptors (EGFR) can mediate astrocyte reactivity after neurotrauma. Previously we showed that there is crosstalk between nucleolin and EGFR that leads to increased EGFR activation followed by increased cell proliferation. Treatment with the nucleolin inhibitor GroA (AS1411) prevented these effects in vitro and in vivo. In this study, we hypothesized that similar interactions may mediate astrogliosis after SCI. Our results demonstrate that nucleolin and EGFR interaction may play a pivotal role in mediating astrocyte proliferation and reactivity after SCI. Moreover, we demonstrate that treatment with GroA reduces EGFR activation, astrocyte proliferation and chondroitin sulphate proteoglycans secretion, therefore promoting axonal regeneration and sprouting into the lesion site. Our results identify, for the first time, a role for the interaction between nucleolin and EGFR in astrocytes after SCI, indicating that nucleolin inhibitor GroA may be used as a novel treatment after neurotrauma. A major barrier for axonal regeneration after spinal cord injury is glial scar created by reactive and proliferating astrocytes. EGFR mediate astrocyte reactivity. We showed that inhibition of nucleolin by GroA, reduces EGFR activation, which results in attenuation of astrocyte reactivity and proliferation in vivo and in vitro. EGFR, epidermal growth factor receptor. © 2016 International Society for Neurochemistry.

Chaperone-Assisted Soluble Expression of a Humanized Anti-EGFR ScFv Antibody in E. Coli

PubMed Central

Veisi, Kamal; Farajnia, Safar; Zarghami, Nosratollah; Khoram Khorshid, Hamid Reza; Samadi, Nasser; Ahdi Khosroshahi, Shiva; Zarei Jaliani, Hossein

2015-01-01

Purpose: Formation of inclusion bodies is a considerable obstacle threatening the advantages of E. coli expression system to serve as the most common and easiest system in recombinant protein production. To solve this problem, several strategies have been proposed among which application of molecular chaperones is of remarkable consideration. The aim of this study was to evaluate the effects of molecular chaperones on soluble expression of aggregation-prone humanized single chain antibody. Methods: To increase the solubility of a humanized single chain antibody (hscFv), different chaperone plasmids including PG-tf2 (GroES- GroEL- tig), ptf16 (tig) and pGro7 (GroES- GroEL) were co-expressed in BL21 cells containing pET-22b- hscFv construct. The solubility of recombinant hscFv was analyzed by SDS-PAGE. After purification of soluble hscFv by Ni-NTA column, the biological activity and cytotoxicity of the recombinant protein were tested by ELISA and MTT assay, respectively. Results: SDS-PAGE analysis of the hscFv revealed that chaperone utility remarkably increased (up to 50%) the solubility of the protein. ELISA test and MTT assay analyses also confirmed the biological activity of the gained hscFv in reaction with A431 cells (OD value: 2.6) and inhibition of their proliferation, respectively. Conclusion: The results of this study revealed that co-expression of chaperones with hscFv leads to remarkable increase in the solubility of the recombinant hscFv, which could be of great consideration for large scale production of recombinant single chain antibodies. PMID:26793607

Systemic cytokine signaling via IL-17 in smokers with obstructive pulmonary disease: a link to bacterial colonization?

PubMed Central

Andelid, Kristina; Tengvall, Sara; Andersson, Anders; Levänen, Bettina; Christenson, Karin; Jirholt, Pernilla; Åhrén, Christina; Qvarfordt, Ingemar; Ekberg-Jansson, Ann; Lindén, Anders

2015-01-01

We examined whether systemic cytokine signaling via interleukin (IL)-17 and growth-related oncogene-α (GRO-α) is impaired in smokers with obstructive pulmonary disease including chronic bronchitis (OPD-CB). We also examined how this systemic cytokine signaling relates to bacterial colonization in the airways of the smokers with OPD-CB. Currently smoking OPD-CB patients (n=60, corresponding to Global initiative for chronic Obstructive Lung Disease [GOLD] stage I–IV) underwent recurrent blood and sputum sampling over 60 weeks, during stable conditions and at exacerbations. We characterized cytokine protein concentrations in blood and bacterial growth in sputum. Asymptomatic smokers (n=10) and never-smokers (n=10) were included as control groups. During stable clinical conditions, the protein concentrations of IL-17 and GRO-α were markedly lower among OPD-CB patients compared with never-smoker controls, whereas the asymptomatic smoker controls displayed intermediate concentrations. Notably, among OPD-CB patients, colonization by opportunistic pathogens was associated with markedly lower IL-17 and GRO-α, compared with colonization by common respiratory pathogens or oropharyngeal flora. During exacerbations in the OPD-CB patients, GRO-α and neutrophil concentrations were increased, whereas protein concentrations and messenger RNA for IL-17 were not detectable in a reproducible manner. In smokers with OPD-CB, systemic cytokine signaling via IL-17 and GRO-α is impaired and this alteration may be linked to colonization by opportunistic pathogens in the airways. Given the potential pathogenic and therapeutic implications, these findings deserve to be validated in new and larger patient cohorts. PMID:25848245

Co-production of GroELS discriminates between intrinsic and thermally-induced recombinant protein aggregation during substrate quality control

PubMed Central

2011-01-01

Background The effects and effectiveness of the chaperone pair GroELS on the yield and quality of recombinant polypeptides produced in Escherichia coli are matter of controversy, as the reported activities of this complex are not always consistent and eventually indicate undesired side effects. The divergence in the reported data could be due, at least partially, to different experimental conditions in independent research approaches. Results We have then selected two structurally different model proteins (namely GFP and E. coli β-galactosidase) and two derived aggregation-prone fusions to explore, in a systematic way, the eventual effects of GroELS co-production on yield, solubility and conformational quality. Host cells were cultured at two alternative temperatures below the threshold at which thermal stress is expected to be triggered, to minimize the involvement of independent stress factors. Conclusions From the analysis of protein yield, solubility and biological activity of the four model proteins produced alone or along the chaperones, we conclude that GroELS impacts on yield and quality of aggregation-prone proteins with intrinsic determinants but not on thermally induced protein aggregation. No effective modifications of protein solubility have been observed, but significant stabilization of small (encapsulable) substrates and moderate chaperone-induced degradation of larger (excluded) polypeptides. These findings indicate that the activities of this chaperone pair in the context of actively producing recombinant bacteria discriminate between intrinsic and thermally-induced protein aggregation, and that the side effects of GroELS overproduction might be determined by substrate size. PMID:21992454

Dark jets in the soft X-ray state of black hole binaries?

NASA Astrophysics Data System (ADS)

Drappeau, S.; Malzac, J.; Coriat, M.; Rodriguez, J.; Belloni, T. M.; Belmont, R.; Clavel, M.; Chakravorty, S.; Corbel, S.; Ferreira, J.; Gandhi, P.; Henri, G.; Petrucci, P.-O.

2017-04-01

X-ray binary observations led to the interpretation that powerful compact jets, produced in the hard state, are quenched when the source transitions to its soft state. The aim of this paper is to discuss the possibility that a powerful dark jet is still present in the soft state. Using the black hole X-ray binaries GX339-4 and H1743-322 as test cases, we feed observed X-ray power density spectra in the soft state of these two sources to an internal shock jet model. Remarkably, the predicted radio emission is consistent with current upper limits. Our results show that for these two sources, a compact dark jet could persist in the soft state with no major modification of its kinetic power compared to the hard state.

Sound Sources Identified in High-Speed Jets by Correlating Flow Density Fluctuations With Far-Field Noise

NASA Technical Reports Server (NTRS)

Panda, Jayanta; Seasholtz, Richard G.

2003-01-01

Noise sources in high-speed jets were identified by directly correlating flow density fluctuation (cause) to far-field sound pressure fluctuation (effect). The experimental study was performed in a nozzle facility at the NASA Glenn Research Center in support of NASA s initiative to reduce the noise emitted by commercial airplanes. Previous efforts to use this correlation method have failed because the tools for measuring jet turbulence were intrusive. In the present experiment, a molecular Rayleigh-scattering technique was used that depended on laser light scattering by gas molecules in air. The technique allowed accurate measurement of air density fluctuations from different points in the plume. The study was conducted in shock-free, unheated jets of Mach numbers 0.95, 1.4, and 1.8. The turbulent motion, as evident from density fluctuation spectra was remarkably similar in all three jets, whereas the noise sources were significantly different. The correlation study was conducted by keeping a microphone at a fixed location (at the peak noise emission angle of 30 to the jet axis and 50 nozzle diameters away) while moving the laser probe volume from point to point in the flow. The following figure shows maps of the nondimensional coherence value measured at different Strouhal frequencies ([frequency diameter]/jet speed) in the supersonic Mach 1.8 and subsonic Mach 0.95 jets. The higher the coherence, the stronger the source was.

Quasistatic and Dynamic Growth of Microscale Spherical Voids (Preprint)

DTIC Science & Technology

2008-01-01

function of gro\\ VIh rate. Eq. (56) is solved numerically for specified material data. Results of crossover growlh rate, v·, and pressure, P’, are shown...At a pressure P < p’, (or v < v"), growth rate is lower for materials with high yield stress. Conversely. at a pressure P > p •. (or v > v·), gro\\ VIh

A Precessing Jet in the CH Cyg Symbiotic System

NASA Astrophysics Data System (ADS)

Karovska, Margarita; Gaetz, Terrance J.; Carilli, Christopher L.; Hack, Warren; Raymond, John C.; Lee, Nicholas P.

2010-02-01

Jets have been detected in only a few symbiotic binaries to date, and CH Cyg is one of them. In 2001, a non-relativistic jet was detected in CH Cyg for the first time in X-rays. We carried out coordinated Chandra, Hubble Space Telescope (HST), and VLA observations in 2008 to study the propagation of this jet and its interaction with the circumbinary medium. We detected the jet with Chandra and HST and determined that the apex has expanded to the south from ~300 AU to ~1400 AU, with the shock front propagating with velocity <100 km s-1. The shock front has significantly slowed down since 2001. Unexpectedly, we also discovered a powerful jet in the NE-SW direction, in the X-ray, optical and radio. This jet has a multi-component structure, including an inner jet and a counterjet at ~170 AU, and a SW component ending in several clumps extending out to ~750 AU. The structure of the jet and the curvature of the outer portion of the SW jet suggest an episodically powered precessing jet or a continuous precessing jet with occasional mass ejections or pulses. We carried out detailed spatial mapping of the X-ray emission and correlation with the optical and radio emission. X-ray spectra were extracted from the central source, inner NE counterjet, and the brightest clump at a distance of ~500 AU from the central source. We discuss the initial results of our analyses, including the multi-component spectral fitting of the jet components and of the central source.

A model for jet-noise analysis using pressure-gradient correlations on an imaginary cone

NASA Technical Reports Server (NTRS)

Norum, T. D.

1974-01-01

The technique for determining the near and far acoustic field of a jet through measurements of pressure-gradient correlations on an imaginary conical surface surrounding the jet is discussed. The necessary analytical developments are presented, and their feasibility is checked by using a point source as the sound generator. The distribution of the apparent sources on the cone, equivalent to the point source, is determined in terms of the pressure-gradient correlations.

Toward a New Paradigm for the Unification of Radio Loud AGN and its Connection to Accretion

NASA Technical Reports Server (NTRS)

Georganpoulos, Markos; Meyer, Eileen T.; Fossati, Giovanni; Lister, Matthew L.

2012-01-01

We recently argued [21J that the collective properties. of radio loud active galactic nuclei point to the existence of two families of sources, one of powerful sources with single velocity jets and one of weaker jets with significant velocity gradients in the radiating plasma. These families also correspond to different accretion modes and therefore different thermal and emission line intrinsic properties: powerful sources have radiatively efficient accretion disks, while in weak sources accretion must be radiatively inefficient. Here, after we briefly review of our recent work, we present the following findings that support our unification scheme: (i) along the broken sequence of aligned objects, the jet kinetic power increases. (ii) in the powerful branch of the sequence of aligned objects the fraction of BLLs decreases with increasing jet power. (iii) for powerful sources, the fraction of BLLs increases for more un-aligned objects, as measured by the core to extended radio emission. Our results are also compatible with the possibility that a given accretion power produces jets of comparable kinetic power.

An XMM-Newton Observation of 4U1755-33 in Quiescence: Evidence for a Fossil X-Ray Jet

NASA Technical Reports Server (NTRS)

Angelini, Lorella; White, Nicholas E.

2003-01-01

We report an XMM-Newton observation of the Low mass X-ray Binary (LMXB) and black hole candidate 4U1755-33. This source had been a bright persistent source for at least 25 yrs, but in 1995 entered an extended quiescent phase. 4U1755-33 was not detected with an upper limit to the 2-10 keV luminosity of 5 x 10(exp 31) d(sup 2) (sub 4kpc) ergs per second (where d(sub 4kpc) is the distance in units of 4 kpc) - consistent with the luminosity of other black hole candidates in a quiescent state. An unexpected result is the discovery of a narrow 7 arc min long X-ray jet centered on the position of 4Ul755-33. The spectrum of the jet is similar to that of jets observed from other galactic and extragalactic sources, and may have been ejected from 4Ul755-33 when it was bright. Jets are a feature of accreting black holes, and the detection of a fossil jet provides additional evidence supporting the black hole candidacy of 4U1755-33. The spectral properties of three bright serendipitous sources in the field are reported and it is suggested these are background active galactic nuclei sources.

A liquid jet setup for x-ray scattering experiments on complex liquids at free-electron laser sources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steinke, I.; Lehmkühler, F., E-mail: felix.lehmkuehler@desy.de; Schroer, M. A.

2016-06-15

In this paper we describe a setup for x-ray scattering experiments on complex fluids using a liquid jet. The setup supports Small and Wide Angle X-ray Scattering (SAXS/WAXS) geometries. The jet is formed by a gas-dynamic virtual nozzle (GDVN) allowing for diameters ranging between 1 μm and 20 μm at a jet length of several hundred μm. To control jet properties such as jet length, diameter, or flow rate, the instrument is equipped with several diagnostic tools. Three microscopes are installed to quantify jet dimensions and stability in situ. The setup has been used at several beamlines performing both SAXSmore » and WAXS experiments. As a typical example we show an experiment on a colloidal dispersion in a liquid jet at the X-ray Correlation Spectroscopy instrument at the Linac Coherent Light Source free-electron laser.« less

A liquid jet setup for x-ray scattering experiments on complex liquids at free-electron laser sources

DOE PAGES

Steinke, I.; Walther, M.; Lehmkühler, F.; ...

2016-06-01

In this study we describe a setup for x-ray scattering experiments on complex fluids using a liquid jet. The setup supports Small and Wide Angle X-ray Scattering (SAXS/WAXS) geometries. The jet is formed by a gas-dynamic virtual nozzle (GDVN) allowing for diameters ranging between 1 μm and 20 μm at a jet length of several hundred μm. To control jet properties such as jet length, diameter, or flow rate, the instrument is equipped with several diagnostic tools. Three microscopes are installed to quantify jet dimensions and stability in situ. The setup has been used at several beamlines performing both SAXSmore » and WAXS experiments. Finally, as a typical example we show an experiment on a colloidal dispersion in a liquid jet at the X-ray Correlation Spectroscopy instrument at the Linac Coherent Light Source free-electron laser.« less

Hypothesis of demodicidosis rosacea flushing etiopathogenesis.

PubMed

Robledo, Mary Ann; Orduz, Mariana

2015-04-01

Most of the patients with erythematotelangiectatic rosacea are characterized by flushing, oedema and telangiectasia. The etiopathogenesis of the flushing in rosacea patients is unknown. Clinically the flushing in rosacea is similar to the "Asian flushing syndrome". Most Asians have an overactive alcohol dehydrogenase (ADH) that tends to break down alcohol into acetaldehyde faster. People with "Asians flushing syndrome" have a genetic disorder with the Aldehyde Dehydrogenase 2(∗)2 (ALDH2(∗)2) allele. This is the reason why they do not metabolize very well the acetaldehyde that comes from the alcohol, which means that acetaldehyde takes much longer to clear from their blood. ALDH2 enzyme is primarily responsible for oxidation of acetaldehyde derived from ethanol metabolism, as well as oxidation of various other endogenous and exogenous aldehydes. Acetaldehyde produces the vasodilatation in the "Asian flushing syndrome". The antibodies against the GroEl chaperonin protein, a 62-kDa heat shock protein were found in the Bacillus oleronius isolated from Demodex mites, in rosacea patients. The GroEl chaperonin protein is a protein that plays a key role in normal folding of ALDH2. If the GroEl chaperonin antibodies found in patients with rosacea, cross react with the human GroEl chaperonin protein, they will not fold normally the ALDH2, and then the enzyme will not metabolize the acetaldehyde. Many of the patients with rosacea have a concomitant infection with Helicobacter pylori in their stomach. The H.pylori produces high amounts of acetaldehyde, which comes from their metabolism of ethanol or carbohydrates. As a result, high amounts of acetaldehyde will circulate for longer time in the blood, until the liver CYP2E1(p450) enzyme system finally metabilizes the acetaldehyde, during that period of time the patients will experience a flushing as well as the people with the "Asian flushing syndrome" suffer when they drink ethanol. To prove the hypothesis it is necessary to find the cross reaction between the GroEl chaperonin antibodies against the B.oleronius and human GroEl chaperonin. Four groups of patients will be studied with or without the GroEl chaperonin antibodies, and H.Pylori. The production of acetaldehyde will be tested by the ethanol-derived microbial production method. If the hypothesis proves to be true, the treatment of Demodex mites and the H. pylori could improve the flushing in the rosacea patients and it will prevent the angiogenesis (telangiectasia), and the association of the gastric injury and carcinogenesis in those patients. Copyright © 2015 Elsevier Ltd. All rights reserved.

A KPC-Scale X-Ray Jet in the BL Lac Source S5 2007+777

NASA Technical Reports Server (NTRS)

Sambruna, Rita M.; Donato, Davide; Cheung, C.C.; Tavecchio, F.; Maraschi, L.

2008-01-01

X-ray jets in AGN are commonly observed in FRII and FRI radiogalaxies, but rarely in BL Lacs, most probably due to their orientation close to the line of sight and the ensuing foreshortening effects. Only three BL Lacs are known so far to contain a kpc-scale X-ray jet. In this paper, we present the evidence for the existence of a fourth extended X-ray jet in the classical radio-selected source S5 2007+777, which for its hybrid FRI/II radio morphology has been classified as a HYMOR (HYbrid MOrphology Radio source). Our Chandra ACISS observations of this source revealed an X-ray counterpart to the 19"-long radio jet. Interestingly, the X-ray properties of the kpc-scale jet in S5 2007+777 are very similar to those observed in FRII jets. First, the X-ray morphology closely mirrors the radio one, with the X-rays being concentrated in the discrete radio knots. Second, the X-ray continuum of the jet/brightest knot is described by a very hard power law, with photon index gamma(sub x) approximately 1. Third, the optical upper limit from archival HST data implies a concave radio-to-X-ray SED. If the X-ray emission is attributed to IC/CMB with equipartition, strong beaming (delta= 13) is required, implying a very large scale (Mpc) jet. The beaming requirement can be somewhat relaxed assuming a magnetic field lower than equipartition. Alternatively, synchrotron emission from a second population of very high-energy electrons is viable. Comparison to other HYMOR jets detected with Chandra is discussed, as well as general implications for the origin of the FRI/II division.

QUASI-STAR JETS AS UNIDENTIFIED GAMMA-RAY SOURCES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Czerny, Bozena; Sikora, Marek; Janiuk, Agnieszka

2012-08-10

Gamma-ray catalogs contain a considerable amount of unidentified sources. Many of these are located out of the Galactic plane and therefore may have extragalactic origin. Here we assume that the formation of massive black holes in galactic nuclei proceeds through a quasi-star stage and consider the possibility of jet production by such objects. Those jets would be the sources of collimated synchrotron and Compton emission, extending from radio to gamma rays. The expected lifetimes of quasi-stars are of the order of million of years while the jet luminosities, somewhat smaller than that of quasar jets, are sufficient to account formore » the unidentified gamma-ray sources. The jet emission dominates over the thermal emission of a quasi-star in all energy bands, except when the jet is not directed toward an observer. The predicted synchrotron emission peaks in the IR band, with the flux close to the limits of the available IR all sky surveys. The ratio of the gamma-ray flux to the IR flux is found to be very large ({approx}60), much larger than in BL Lac objects but reached by some radio-loud quasars. On the other hand, radio-loud quasars show broad emission lines while no such lines are expected from quasi-stars. Therefore, the differentiation between various scenarios accounting for the unidentified gamma-ray sources will be possible at the basis of the photometry and spectroscopy of the IR/optical counterparts.« less

Assessing Reliability and Validity of the "GroPromo" Audit Tool for Evaluation of Grocery Store Marketing and Promotional Environments

ERIC Educational Resources Information Center

Kerr, Jacqueline; Sallis, James F.; Bromby, Erica; Glanz, Karen

2012-01-01

Objective: To evaluate reliability and validity of a new tool for assessing the placement and promotional environment in grocery stores. Methods: Trained observers used the "GroPromo" instrument in 40 stores to code the placement of 7 products in 9 locations within a store, along with other promotional characteristics. To test construct validity,…

A thermophilic mini-chaperonin contains a conserved polypeptide-binding surface: combined crystallographic and NMR studies of the GroEL Apical Domain with implications for substrate interactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hua, Q. X. H.; Dementieva, I. S. D.; Walsh, M. A. W.

2001-02-23

A homologue of the Escherichia coli GroEL apical domain was obtained from thermophilic eubacterium Thermus thermophilus. The domains share 70 % sequence identity (101 out of 145 residues). The thermal stability of the T. thermophilus apical domain (T{sub m}>100{sup o}C as evaluated by circular dichroism) is at least 35{sup o}C greater than that of the E. coli apical domain (T{sub m}=65{sup o}C). The crystal structure of a selenomethione-substituted apical domain from T. thermophilus was determined to a resolution of 1.78 {angstrom} using multiwavelength-anomalous-diffraction phasing. The structure is similar to that of the E. coli apical domain (root-mean-square deviation 0.45 {angstrom}more » based on main-chain atoms). The thermophilic structure contains seven additional salt bridges of which four contain charge-stabilized hydrogen bonds. Only one of the additional salt bridges would face the 'Anfinsen cage' in GroEL. High temperatures were exploited to map sites of interactions between the apical domain and molten globules. NMR footprints of apical domain-protein complexes were obtained at elevated temperature using {sup 15}N-{sup 1}H correlation spectra of {sup 15}N-labeled apical domain. Footprints employing two polypeptides unrelated in sequence or structure (an insulin monomer and the SRY high-mobility-group box, each partially unfolded at 50{sup o}C) are essentially the same and consistent with the peptide-binding surface previously defined in E. coli GroEL and its apical domain-peptide complexes. An additional part of this surface comprising a short N-terminal {alpha}-helix is observed. The extended footprint rationalizes mutagenesis studies of intact GroEL in which point mutations affecting substrate binding were found outside the 'classical' peptide-binding site. Our results demonstrate structural conservation of the apical domain among GroEL homologues and conservation of an extended non-polar surface recognizing diverse polypeptides.« less

Co-administration of rIpaB domain of Shigella with rGroEL of S. Typhi enhances the immune responses and protective efficacy against Shigella infection.

PubMed

Chitradevi, Sekar Tamil Selvi; Kaur, Gurpreet; Uppalapati, Sivaramakrishna; Yadav, Anandprakash; Singh, Dependrapratap; Bansal, Anju

2015-11-01

Shigella species cause severe bacillary dysentery in humans and are associated with high morbidity and mortality. The Invasion plasmid antigen (IpaB) protein, which is conserved across all Shigella spp., induces macrophage cell death and is required to invade host cells. The present study evaluates the immunogenicity and protective efficacy of the recombinant (r) domain region of IpaB (rIpaB) of S. flexneri. rIpaB was administered either alone or was co-administered with the rGroEL (heat shock protein 60) protein from S. Typhi as an adjuvant in a mouse model of intranasal immunization. The IpaB domain region (37 kDa) of S. flexneri was amplified from an invasion plasmid, cloned, expressed in BL21 Escherichia coli cells and purified. Immunization with the rIpaB domain alone stimulated both humoral and cell-mediated immune responses. Furthermore, robust antibody (IgG, IgA) and T-cell responses were induced when the rIpaB domain was co-administered with rGroEL. Antibody isotyping revealed higher IgG1 and IgG2a antibody titers and increased interferon-gamma (IFN-γ) secretion in the co-administered group. Immunization of mice with the rIpaB domain alone protected 60%-70% of the mice from lethal infection by S. flexneri, S. boydii and S. sonnei, whereas co-administration with rGroEL increased the protective efficacy to 80%-85%. Organ burden and histopathological studies also revealed a significant reduction in lung infection in the co-immunized mice compared with mice immunized with the rIpaB domain alone. This study emphasizes that the co-administration of the rIpaB domain and rGroEL protein improves immune responses in mice and increases protective efficacy against Shigella infection. This is also the first report to evaluate the potential of the GroEL (Hsp 60) protein of S. Typhi as an adjuvant molecule, thereby overcoming the need for commercial adjuvants.

Glyprolines exert protective and repair-promoting effects in the rat stomach: potential role of the cytokine GRO/CINC-1.

PubMed

Bakaeva, Z V; Sangadzhieva, A D; Tani, S; Myasoedov, N F; Andreeva, L A; Torshin, V I; Wallace, J L; Tanaka, T

2016-04-01

Glyprolines have been reported to exert protective effects in the stomach. In this study, we examined the potential effects of intranasal administration of Pro-Gly-Pro (PGP) and N-acetyl-Pro-Gly-Pro (AcPGP) on experimental gastric ulcer formation and healing. We also studied gastric release of the cytokine GRO/CINC-1, and its potential role in ulcer development and healing. Gastric ulcers were induced in rats by applying acetic acid to the serosa of the stomach. PGP and AcPGP were then administered at a dose of 3.7 μmol/kg once daily on either days 1 - 3 (ulcer formation) or days 4 - 6 (ulcer healing). Measurement of ulcer area and histological examination of gastric tissue were carried out on days 4 and 7 after application of acetic acid. In vitro studies involved addition of the glyprolines to cultured rat gastric epithelial cells with or without lipopolysaccharide. Reverse transcription PCR, real-time PCR and ELISA were used for cytokine analysis. PGP and AcPGP significantly reduced ulcer areas on the 4(th) day and accelerated the healing on the 7(th) day compared with the control. After acetic acid-induced ulceration, the expression of GRO/CINC-1 mRNA in gastric tissue was increased 9-fold versus the sham-operated group. Treatment with PGP or AcPGP both significantly suppressed the expression of GRO/CINC-1 mRNA in gastric tissue. However, the glyprolines did not alter LPS-induced mRNA expression or release of GRO/CINC-1 from cultured rat gastric epithelial cells, even though those cells were harvested from rats subjected to the ulcer-induction procedure. The results of this study show that intranasal administration of PGP and AcPGP significantly increased resistance against acetic acid-induced ulceration and accelerated healing in the rats. These effects may be due, at least in part, to their ability to reduce the acetic acid-induced GRO/CINC-1 expression and production in gastric tissue.

Space Science

NASA Image and Video Library

1991-01-28

This is the STS-37 Crew portrait. Pictured from left to right are Kenneth D. (Ken) Cameron, pilot; Jay Apt, mission specialist; Steven R. Nagel, commander; and Jerry L. Ross and Linda M. Godwin, mission specialists. Launched aboard the Space Shuttle Atlantis on April 5, 1991 at 9:22:44am (EST), the crew’s major objective was the deployment of the Gamma Ray Observatory (GRO). Included in the observatory were the Burst and Transient Source Experiment (BATSE); the Imaging Compton Telescope (COMPTEL); the Energetic Gamma Ray Experiment Telescope (EGRET); and the Oriented Scintillation Spectrometer Telescope (OSSEE).

Space Shuttle Projects

NASA Image and Video Library

1991-04-05

Launched aboard the Space Shuttle Atlantis on April 5, 1991 at 9:22:44am (EST), the STS-37 mission hurtles toward space. Her crew included Steven R. Nagel, commander; Kenneth D. (Ken) Cameron, pilot; and Jay Apt, Jerry L. Ross, and Linda M. Godwin, all mission specialists. The crew’s major objective was the deployment of the Gamma Ray Observatory (GRO). Included in the observatory were the Burst and Transient Source Experiment (BATSE); the Imaging Compton Telescope (COMPTEL); the Energetic Gamma Ray Experiment Telescope (EGRET); and the Oriented Scintillation Spectrometer Telescope (OSSEE).

TeV radiation from the Crab nebula and other matters

NASA Technical Reports Server (NTRS)

Lamb, R. C.

1990-01-01

The detection of the Crab Nebula via the Cherenkov imaging technique places TeV astronomy on a secure observational footing. The motivation for TeV observations, a discussion of the atmospheric Cherenkov technique, the experimental details of the Crab Nebula detection, and its scientific implications are presented. The present dilemma of VHE/UHE astronomy is that the Crab appears to be the only source whose showers match theoretical expectations. The situation will be clarified as improved ground-based detectors come on-line with sensitivities matching those of the GRO (Gamma Ray Observatory) instruments.

Lactobacillus plantarum subsp. argentoratensis subsp. nov., isolated from vegetable matrices.

PubMed

Bringel, Françoise; Castioni, Anna; Olukoya, Daniel K; Felis, Giovanna E; Torriani, Sandra; Dellaglio, Franco

2005-07-01

Fourteen strains isolated from vegetable sources and identified as belonging to Lactobacillus plantarum presented an atypical pattern of amplification with a species-specific multiplex-PCR assay. Phylogenetic analysis of two protein-encoding genes, recA (encoding the recombinase A protein) and cpn60 (encoding the GroEL chaperonin), as well as phenotypic and genomic traits revealed a homogeneous group of very closely related strains for which subspecies status is proposed, with the name Lactobacillus plantarum subsp. argentoratensis. The type strain is DKO 22(T) (=CIP 108320(T)=DSM 16365(T)).

Modeling the nucleus and jets of comet 81P/Wild 2 based on the Stardust encounter data

NASA Technical Reports Server (NTRS)

Sekanina, Zdenek; Brownlee, Donald E.; Economou, Thanasis E.; Tuzzolino, Anthony J.; Green, Simon F.

2004-01-01

We interpret the nucleus properties and jet activity from the Stardust spacecraft imaging and the onboard dust monitoring system data. Triangulation of 20 jets shows that 2 emanate from the nucleus dark side and 16 emanate from sources that are on slopes where the Sun's elevation is greater than predicted from the fitted triaxial ellipsoid. Seven sources, including five in the Mayo depression, coincide with relatively bright surface spots. Fitting the imaged jets, the spikelike temporal distribution of dust impacts indicates that the spacecraft crossed thin, densely populated sheets of particulate ejecta extending from small sources on the rotating nucleus, consistent with an emission cone model.

Evaluation of hybrid inverse planning and optimization (HIPO) algorithm for optimization in real-time, high-dose-rate (HDR) brachytherapy for prostate.

PubMed

Pokharel, Shyam; Rana, Suresh; Blikenstaff, Joseph; Sadeghi, Amir; Prestidge, Bradley

2013-07-08

The purpose of this study is to investigate the effectiveness of the HIPO planning and optimization algorithm for real-time prostate HDR brachytherapy. This study consists of 20 patients who underwent ultrasound-based real-time HDR brachytherapy of the prostate using the treatment planning system called Oncentra Prostate (SWIFT version 3.0). The treatment plans for all patients were optimized using inverse dose-volume histogram-based optimization followed by graphical optimization (GRO) in real time. The GRO is manual manipulation of isodose lines slice by slice. The quality of the plan heavily depends on planner expertise and experience. The data for all patients were retrieved later, and treatment plans were created and optimized using HIPO algorithm with the same set of dose constraints, number of catheters, and set of contours as in the real-time optimization algorithm. The HIPO algorithm is a hybrid because it combines both stochastic and deterministic algorithms. The stochastic algorithm, called simulated annealing, searches the optimal catheter distributions for a given set of dose objectives. The deterministic algorithm, called dose-volume histogram-based optimization (DVHO), optimizes three-dimensional dose distribution quickly by moving straight downhill once it is in the advantageous region of the search space given by the stochastic algorithm. The PTV receiving 100% of the prescription dose (V100) was 97.56% and 95.38% with GRO and HIPO, respectively. The mean dose (D(mean)) and minimum dose to 10% volume (D10) for the urethra, rectum, and bladder were all statistically lower with HIPO compared to GRO using the student pair t-test at 5% significance level. HIPO can provide treatment plans with comparable target coverage to that of GRO with a reduction in dose to the critical structures.

Effects of short-chain fatty acids on Actinomyces naeslundii biofilm formation.

PubMed

Yoneda, S; Kawarai, T; Narisawa, N; Tuna, E B; Sato, N; Tsugane, T; Saeki, Y; Ochiai, K; Senpuku, H

2013-10-01

Actinomyces naeslundii is an early colonizer and has important roles in the development of the oral biofilm. Short-chain fatty acids (SCFA) are secreted extracellularly as a product of metabolism by gram-negative anaerobes, e.g. Porphyromonas gingivalis and Fusobacterium nucleatum; and the SCFA may affect biofilm development with interaction between A. naeslundii and gram-negative bacteria. Our aim was to investigate the effects of SCFA on biofilm formation by A. naeslundii and to determine the mechanism. We used the biofilm formation assay in 96-well microtiter plates in tryptic soy broth without dextrose and with 0.25% sucrose using safranin stain of the biofilm monitoring 492 nm absorbance. To determine the mechanism by SCFA, the production of chaperones and stress-response proteins (GrpE and GroEL) in biofilm formation was examined using Western blot fluorescence activity with GrpE and GroEL antibodies. Adding butyric acid (6.25 mm) 0, 6 and 10 h after beginning culture significantly increased biofilm formation by A. naeslundii, and upregulation was observed at 16 h. Upregulation was also observed using appropriate concentrations of other SCFA. In the upregulated biofilm, production of GrpE and GroEL was higher where membrane-damaged or dead cells were also observed. The upregulated biofilm was significantly reduced by addition of anti-GroEL antibody. The data suggest biofilm formation by A. naeslundii was upregulated dependent on the production of stress proteins, and addition of SCFA increased membrane-damaged or dead cells. Production of GroEL may physically play an important role in biofilm development. 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd

A new highly sensitive and specific real-time PCR assay targeting the malate dehydrogenase gene of Kingella kingae and application to 201 pediatric clinical specimens.

PubMed

Houmami, Nawal El; Durand, Guillaume André; Bzdrenga, Janek; Darmon, Anne; Minodier, Philippe; Seligmann, Hervé; Raoult, Didier; Fournier, Pierre-Edouard

2018-06-06

Kingella kingae is a significant pediatric pathogen responsible for bone and joint infections, occult bacteremia, and endocarditis in early childhood. Past efforts to detect this bacterium by culture and broad-range 16S rRNA gene polymerase chain reaction (PCR) assays from clinical specimens have proven unsatisfactory and were gradually let out for the benefit of specific real-time PCR tests targeting the groEL gene and RTX locus of K. kingae by the late 2000s. However, recent studies showed that real-time PCR (RT-PCR) assays targeting the Kingella sp. RTX locus that are currently available for the diagnosis of K. kingae infection lack of specificity because they could not distinguish between K. kingae and the recently described K. negevensis species. Furthermore, in silico analysis of the groEL gene from a large collection of 45 K. kingae strains showed that primers and probes from K. kingae groEL -based RT-PCR assays display a few mismatches with K. kingae groEL variations that may result in a decreased detection sensitivity, especially in paucibacillary clinical specimens. In order to provide an alternative to groEL - and RTX-targeting RT-PCR assays that may suffer from suboptimal specificity and sensitivity, a K. kingae -specific RT-PCR assay targeting the malate dehydrogenase ( mdh ) gene was developed for predicting no mismatch against 18 variants of the K. kingae mdh gene from 20 distinct sequences types of K. kingae This novel K. kingae -specific RT-PCR assay demonstrated a high specificity and sensitivity and was successfully used to diagnose K. kingae infections and carriage in 104 clinical specimens from children aged between 7 months and 7 years old. Copyright © 2018 American Society for Microbiology.

Bordetella pertussis Proteins Dominating the Major Histocompatibility Complex Class II-Presented Epitope Repertoire in Human Monocyte-Derived Dendritic Cells

PubMed Central

Stenger, Rachel M.; Meiring, Hugo D.; Kuipers, Betsy; Poelen, Martien; van Gaans-van den Brink, Jacqueline A. M.; Boog, Claire J. P.; de Jong, Ad P. J. M.

2014-01-01

Knowledge of naturally processed Bordetella pertussis-specific T cell epitopes may help to increase our understanding of the basis of cell-mediated immune mechanisms to control this reemerging pathogen. Here, we elucidate for the first time the dominant major histocompatibility complex (MHC) class II-presented B. pertussis CD4+ T cell epitopes, expressed on human monocyte-derived dendritic cells (MDDC) after the processing of whole bacterial cells by use of a platform of immunoproteomics technology. Pertussis epitopes identified in the context of HLA-DR molecules were derived from two envelope proteins, i.e., putative periplasmic protein (PPP) and putative peptidoglycan-associated lipoprotein (PAL), and from two cytosolic proteins, i.e., 10-kDa chaperonin groES protein (groES) and adenylosuccinate synthetase (ASS). No epitopes were detectable from known virulence factors. CD4+ T cell responsiveness in healthy adults against peptide pools representing epitope regions or full proteins confirmed the immunogenicity of PAL, PPP, groES, and ASS. Elevated lymphoproliferative activity to PPP, groES, and ASS in subjects within a year after the diagnosis of symptomatic pertussis suggested immunogenic exposure to these proteins during clinical infection. The PAL-, PPP-, groES-, and ASS-specific responses were associated with secretion of functional Th1 (tumor necrosis factor alpha [TNF-α] and gamma interferon [IFN-γ]) and Th2 (interleukin 5 [IL-5] and IL-13) cytokines. Relative paucity in the natural B. pertussis epitope display of MDDC, not dominated by epitopes from known protective antigens, can interfere with the effectiveness of immune recognition of B. pertussis. A more complete understanding of hallmarks in B. pertussis-specific immunity may advance the design of novel immunological assays and prevention strategies. PMID:24599530

Bordetella pertussis proteins dominating the major histocompatibility complex class II-presented epitope repertoire in human monocyte-derived dendritic cells.

PubMed

Stenger, Rachel M; Meiring, Hugo D; Kuipers, Betsy; Poelen, Martien; van Gaans-van den Brink, Jacqueline A M; Boog, Claire J P; de Jong, Ad P J M; van Els, Cécile A C M

2014-05-01

Knowledge of naturally processed Bordetella pertussis-specific T cell epitopes may help to increase our understanding of the basis of cell-mediated immune mechanisms to control this reemerging pathogen. Here, we elucidate for the first time the dominant major histocompatibility complex (MHC) class II-presented B. pertussis CD4(+) T cell epitopes, expressed on human monocyte-derived dendritic cells (MDDC) after the processing of whole bacterial cells by use of a platform of immunoproteomics technology. Pertussis epitopes identified in the context of HLA-DR molecules were derived from two envelope proteins, i.e., putative periplasmic protein (PPP) and putative peptidoglycan-associated lipoprotein (PAL), and from two cytosolic proteins, i.e., 10-kDa chaperonin groES protein (groES) and adenylosuccinate synthetase (ASS). No epitopes were detectable from known virulence factors. CD4(+) T cell responsiveness in healthy adults against peptide pools representing epitope regions or full proteins confirmed the immunogenicity of PAL, PPP, groES, and ASS. Elevated lymphoproliferative activity to PPP, groES, and ASS in subjects within a year after the diagnosis of symptomatic pertussis suggested immunogenic exposure to these proteins during clinical infection. The PAL-, PPP-, groES-, and ASS-specific responses were associated with secretion of functional Th1 (tumor necrosis factor alpha [TNF-α] and gamma interferon [IFN-γ]) and Th2 (interleukin 5 [IL-5] and IL-13) cytokines. Relative paucity in the natural B. pertussis epitope display of MDDC, not dominated by epitopes from known protective antigens, can interfere with the effectiveness of immune recognition of B. pertussis. A more complete understanding of hallmarks in B. pertussis-specific immunity may advance the design of novel immunological assays and prevention strategies.

First molecular detection and phylogenetic analysis of Anaplasma phagocytophilum in shelter dogs in Seoul, Korea.

PubMed

Lee, Sukyee; Lee, Seung-Hun; VanBik, Dorene; Kim, Neung-Hee; Kim, Kyoo-Tae; Goo, Youn-Kyoung; Rhee, Man Hee; Kwon, Oh-Deog; Kwak, Dongmi

2016-07-01

In this study, the status of Anaplasma phagocytophilum infection was assessed in shelter dogs in Seoul, Korea, with PCR and phylogenetic analyses. Nested PCR on 1058 collected blood samples revealed only one A. phagocytophilum positive sample (female, age <1year, mixed breed, collected from the north of the Han River). The genetic variability of A. phagocytophilum was evaluated by genotyping, using the 16S rRNA, groEL, and msp2 gene sequences of the positive sample. BLASTn analysis revealed that the 16S rRNA, groEL, and msp2 genes had 99.6%, 99.9%, and 100% identity with the following sequences deposited in GenBank: a cat 16S rRNA sequence from Korea (KR021166), a rat groEL sequence from Korea (KT220194), and a water deer msp2 sequence from Korea (HM752099), respectively. Phylogenetic analyses classified the groEL gene into two distinct groups (serine and alanine), whereas the msp2 gene showed a general classification into two groups (USA and Europe) that were further subgrouped according to region. To the best of our knowledge, this study is the first to describe the molecular diagnosis of A. phagocytophilum in dogs reared in Korea. In addition, the high genetic identity of the 16S rRNA and groEL sequences between humans and dogs from the same region suggests a possible epidemiological relation. Given the conditions of climate change, tick ecology, and recent incidence of human granulocytic anaplasmosis in Korea, the findings of this study underscore the need to establish appropriate control programs for tick-borne diseases in Korea. Copyright © 2016 Elsevier GmbH. All rights reserved.

Broad-band, radio spectro-polarimetric study of 100 radiative-mode and jet-mode AGN

NASA Astrophysics Data System (ADS)

O'Sullivan, S. P.; Purcell, C. R.; Anderson, C. S.; Farnes, J. S.; Sun, X. H.; Gaensler, B. M.

2017-08-01

We present the results from a broad-band (1 to 3 GHz), spectro-polarimetry study of the integrated emission from 100 extragalactic radio sources with the Australia Telescope Compact Array, selected to be highly linearly polarized at 1.4 GHz. We use a general-purpose, polarization model-fitting procedure that describes the Faraday rotation measure (RM) and intrinsic polarization structure of up to three distinct polarized emission regions or `RM components' of a source. Overall, 37 per cent/52 per cent/11 per cent of sources are best fitted by one/two/three RM components. However, these fractions are dependent on the signal-to-noise ratio (S/N) in polarization (more RM components more likely at higher S/N). In general, our analysis shows that sources with high integrated degrees of polarization at 1.4 GHz have low Faraday depolarization, are typically dominated by a single RM component, have a steep spectral index and have a high intrinsic degree of polarization. After classifying our sample into radiative-mode and jet-mode AGN, we find no significant difference between the Faraday rotation or Faraday depolarization properties of jet-mode and radiative-mode AGN. However, there is a statistically significant difference in the intrinsic degree of polarization between the two types, with the jet-mode sources having more intrinsically ordered magnetic field structures than the radiative-mode sources. We also find a preferred perpendicular orientation of the intrinsic magnetic field structure of jet-mode AGN with respect to the jet direction, while no clear preference is found for the radiative-mode sources.

The Großschwabhausen binary survey

NASA Astrophysics Data System (ADS)

Mugrauer, M.; Buder, S.; Reum, F.; Birth, A.

2017-01-01

Background: Since 2009, the Großschwabhausen binary survey is being carried out at the University Observatory Jena. This new imaging survey uses available time slots during photometric monitoring campaigns, caused by nonphotometric weather conditions, which often exhibit good atmospheric seeing. The goal of the project is to obtain current relative astrometric measurements of the binary systems that are listed in the Washington Visual Double Star Catalog. Materials and Methods: For the survey we use the Refraktor-Teleskop-Kamera at the University Observatory Jena to take imaging data of selected visual binary systems. Results: In this paper, we characterize the target sample of the survey, describe the imaging observations and the astrometric measurements including the astrometric calibration, and present the relative astrometric measures of 352 binaries that could be obtained during the course of the Großschwabhausen binary survey, so far.

An Empirical Temperature Variance Source Model in Heated Jets

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Bridges, James

2012-01-01

An acoustic analogy approach is implemented that models the sources of jet noise in heated jets. The equivalent sources of turbulent mixing noise are recognized as the differences between the fluctuating and Favre-averaged Reynolds stresses and enthalpy fluxes. While in a conventional acoustic analogy only Reynolds stress components are scrutinized for their noise generation properties, it is now accepted that a comprehensive source model should include the additional entropy source term. Following Goldstein s generalized acoustic analogy, the set of Euler equations are divided into two sets of equations that govern a non-radiating base flow plus its residual components. When the base flow is considered as a locally parallel mean flow, the residual equations may be rearranged to form an inhomogeneous third-order wave equation. A general solution is written subsequently using a Green s function method while all non-linear terms are treated as the equivalent sources of aerodynamic sound and are modeled accordingly. In a previous study, a specialized Reynolds-averaged Navier-Stokes (RANS) solver was implemented to compute the variance of thermal fluctuations that determine the enthalpy flux source strength. The main objective here is to present an empirical model capable of providing a reasonable estimate of the stagnation temperature variance in a jet. Such a model is parameterized as a function of the mean stagnation temperature gradient in the jet, and is evaluated using commonly available RANS solvers. The ensuing thermal source distribution is compared with measurements as well as computational result from a dedicated RANS solver that employs an enthalpy variance and dissipation rate model. Turbulent mixing noise predictions are presented for a wide range of jet temperature ratios from 1.0 to 3.20.

Multiplex PCR for the detection and differentiation of Vibrio parahaemolyticus strains using the groEL, tdh and trh genes.

PubMed

Hossain, Muhammad Tofazzal; Kim, Young-Ok; Kong, In-Soo

2013-01-01

Vibrio parahaemolyticus is a significant cause of human gastrointestinal disorders worldwide, transmitted primarily by ingestion of raw or undercooked contaminated seafood. In this study, a multiplex PCR assay for the detection and differentiation of V. parahaemolyticus strains was developed using primer sets for a species-specific marker, groEL, and two virulence markers, tdh and trh. Multiplex PCR conditions were standardised, and extracted genomic DNA of 70 V. parahaemolyticus strains was used for identification. The sensitivity and efficacy of this method were validated using artificially inoculated shellfish and seawater. The expected sizes of amplicons were 510 bp, 382 bp, and 171 bp for groEL, tdh and trh, respectively. PCR products were sufficiently different in size, and the detection limits of the multiplex PCR for groEL, tdh and trh were each 200 pg DNA. Specific detection and differentiation of virulent from non-virulent strains in shellfish homogenates and seawater was also possible after artificial inoculation with various V. parahaemolyticus strains. This newly developed multiplex PCR is a rapid assay for detection and differentiation of pathogenic V. parahaemolyticus strains, and could be used to prevent disease outbreaks and protect public health by helping the seafood industry maintain a safe shellfish supply. Copyright © 2013 Elsevier Ltd. All rights reserved.

Structure of GroEL in Complex with an Early Folding Intermediate of Alanine Glyoxylate Aminotransferase*

PubMed Central

Albert, Armando; Yunta, Cristina; Arranz, Rocío; Peña, Álvaro; Salido, Eduardo; Valpuesta, José María; Martín-Benito, Jaime

2010-01-01

Primary hyperoxaluria type 1 is a rare autosomal recessive disease caused by mutations in the alanine glyoxylate aminotransferase gene (AGXT). We have previously shown that P11L and I340M polymorphisms together with I244T mutation (AGXT-LTM) represent a conformational disease that could be amenable to pharmacological intervention. Thus, the study of the folding mechanism of AGXT is crucial to understand the molecular basis of the disease. Here, we provide biochemical and structural data showing that AGXT-LTM is able to form non-native folding intermediates. The three-dimensional structure of a complex between the bacterial chaperonin GroEL and a folding intermediate of AGXT-LTM mutant has been solved by cryoelectron microscopy. The electron density map shows the protein substrate in a non-native extended conformation that crosses the GroEL central cavity. Addition of ATP to the complex induces conformational changes on the chaperonin and the internalization of the protein substrate into the folding cavity. The structure provides a three-dimensional picture of an in vivo early ATP-dependent step of the folding reaction cycle of the chaperonin and supports a GroEL functional model in which the chaperonin promotes folding of the AGXT-LTM mutant protein through forced unfolding mechanism. PMID:20056599

Structure of GroEL in complex with an early folding intermediate of alanine glyoxylate aminotransferase.

PubMed

Albert, Armando; Yunta, Cristina; Arranz, Rocío; Peña, Alvaro; Salido, Eduardo; Valpuesta, José María; Martín-Benito, Jaime

2010-02-26

Primary hyperoxaluria type 1 is a rare autosomal recessive disease caused by mutations in the alanine glyoxylate aminotransferase gene (AGXT). We have previously shown that P11L and I340M polymorphisms together with I244T mutation (AGXT-LTM) represent a conformational disease that could be amenable to pharmacological intervention. Thus, the study of the folding mechanism of AGXT is crucial to understand the molecular basis of the disease. Here, we provide biochemical and structural data showing that AGXT-LTM is able to form non-native folding intermediates. The three-dimensional structure of a complex between the bacterial chaperonin GroEL and a folding intermediate of AGXT-LTM mutant has been solved by cryoelectron microscopy. The electron density map shows the protein substrate in a non-native extended conformation that crosses the GroEL central cavity. Addition of ATP to the complex induces conformational changes on the chaperonin and the internalization of the protein substrate into the folding cavity. The structure provides a three-dimensional picture of an in vivo early ATP-dependent step of the folding reaction cycle of the chaperonin and supports a GroEL functional model in which the chaperonin promotes folding of the AGXT-LTM mutant protein through forced unfolding mechanism.

Relativistic baryonic jets from an ultraluminous supersoft X-ray source.

PubMed

Liu, Ji-Feng; Bai, Yu; Wang, Song; Justham, Stephen; Lu, You-Jun; Gu, Wei-Min; Liu, Qing-Zhong; Di Stefano, Rosanne; Guo, Jin-Cheng; Cabrera-Lavers, Antonio; Álvarez, Pedro; Cao, Yi; Kulkarni, Shri

2015-12-03

The formation of relativistic jets by an accreting compact object is one of the fundamental mysteries of astrophysics. Although the theory is poorly understood, observations of relativistic jets from systems known as microquasars (compact binary stars) have led to a well established phenomenology. Relativistic jets are not expected to be produced by sources with soft or supersoft X-ray spectra, although two such systems are known to produce relatively low-velocity bipolar outflows. Here we report the optical spectra of an ultraluminous supersoft X-ray source (ULS) in the nearby galaxy M81 (M81 ULS-1; refs 9, 10). Unexpectedly, the spectra show blueshifted, broad Hα emission lines, characteristic of baryonic jets with relativistic speeds. These time-variable emission lines have projected velocities of about 17 per cent of the speed of light, and seem to be similar to those from the prototype microquasar SS 433 (refs 11, 12). Such relativistic jets are not expected to be launched from white dwarfs, and an origin from a black hole or a neutron star is hard to reconcile with the persistence of M81 ULS-1's soft X-rays. Thus the unexpected presence of relativistic jets in a ULS challenges canonical theories of jet formation, but might be explained by a long-speculated, supercritically accreting black hole with optically thick outflows.

Static and wind tunnel near-field/far-field jet noise measurements from model scale single-flow baseline and suppressor nozzles. Volume 1: Noise source locations and extrapolation of static free-field jet noise data

NASA Technical Reports Server (NTRS)

Jaeck, C. L.

1976-01-01

A test was conducted in the Boeing Large Anechoic Chamber to determine static jet noise source locations of six baseline and suppressor nozzle models, and establish a technique for extrapolating near field data into the far field. The test covered nozzle pressure ratios from 1.44 to 2.25 and jet velocities from 412 to 594 m/s at a total temperature of 844 K.

Simulations of Solar Jets Confined by Coronal Loops

NASA Technical Reports Server (NTRS)

Wyper, P. F.; De Vore, C. R.

2016-01-01

Coronal jets are collimated, dynamic events that occur over a broad range of spatial scales in the solar corona. In the open magnetic field of coronal holes, jets form quasi-radial spires that can extend far out into the heliosphere, while in closed-field regions the jet outflows are confined to the corona. We explore the application of the embedded-bipole model to jets occurring in closed coronal loops. In this model, magnetic free energy is injected slowly by footpoint motions that introduce twist within the closed dome of the jet source region, and is released rapidly by the onset of an ideal kink-like instability. Two length scales characterize the system: the width (N) of the jet source region and the footpoint separation (L) of the coronal loop that envelops the jet source. We find that both the conditions for initiation and the subsequent dynamics are highly sensitive to the ratio L/N. The longest-lasting and most energetic jets occur along long coronal loops with large L/N ratios, and share many of the features of open-field jets, while smaller L/N ratios produce shorter-duration, less energetic jets that are affected by reflections from the far-loop footpoint. We quantify the transition between these behaviors and show that our model replicates key qualitative and quantitative aspects of both quiet Sun and active-region loop jets. We also find that there connection between the closed dome and surrounding coronal loop is very extensive: the cumulative reconnected flux at least matches the total flux beneath the dome for small L/N, and is more than double that value for large L/N.

SIMULATIONS OF SOLAR JETS CONFINED BY CORONAL LOOPS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wyper, P. F.; DeVore, C. R., E-mail: peter.f.wyper@nasa.gov, E-mail: c.richard.devore@nasa.gov

Coronal jets are collimated, dynamic events that occur over a broad range of spatial scales in the solar corona. In the open magnetic field of coronal holes, jets form quasi-radial spires that can extend far out into the heliosphere, while in closed-field regions the jet outflows are confined to the corona. We explore the application of the embedded-bipole model to jets occurring in closed coronal loops. In this model, magnetic free energy is injected slowly by footpoint motions that introduce twist within the closed dome of the jet source region, and is released rapidly by the onset of an idealmore » kink-like instability. Two length scales characterize the system: the width (N) of the jet source region and the footpoint separation (L) of the coronal loop that envelops the jet source. We find that both the conditions for initiation and the subsequent dynamics are highly sensitive to the ratio L/N. The longest-lasting and most energetic jets occur along long coronal loops with large L/N ratios, and share many of the features of open-field jets, while smaller L/N ratios produce shorter-duration, less energetic jets that are affected by reflections from the far-loop footpoint. We quantify the transition between these behaviors and show that our model replicates key qualitative and quantitative aspects of both quiet Sun and active-region loop jets. We also find that the reconnection between the closed dome and surrounding coronal loop is very extensive: the cumulative reconnected flux at least matches the total flux beneath the dome for small L/N, and is more than double that value for large L/N.« less

Proper motions of collimated jets from intermediate-mass protostars in the Carina Nebula

NASA Astrophysics Data System (ADS)

Reiter, Megan; Kiminki, Megan M.; Smith, Nathan; Bally, John

2017-10-01

We present proper motion measurements of 37 jets and HH objects in the Carina Nebula measured in two epochs of H α images obtained ˜10 yr apart with Hubble Space Telescope/Advanced Camera for Surveys (ACS). Transverse velocities in all but one jet are faster than ≳ 25 km s-1, confirming that the jet-like H α features identified in the first epoch images trace outflowing gas. Proper motions constrain the location of the jet-driving source and provide kinematic confirmation of the intermediate-mass protostars that we identify for 20/37 jets. Jet velocities do not correlate with the estimated protostar mass and embedded driving sources do not have slower jets. Instead, transverse velocities (median ˜75 km s-1) are similar to those in jets from low-mass stars. Assuming a constant velocity since launch, we compute jet dynamical ages (median ˜104 yr). If continuous emission from inner jets traces the duration of the most recent accretion bursts, then these episodes are sustained longer (median ˜700 yr) than the typical decay time of an FU Orionis outburst. These jets can carry appreciable momentum that may be injected into the surrounding environment. The resulting outflow force, dP/dt, lies between that measured in low- and high-mass sources, despite the very different observational tracers used. Smooth scaling of the outflow force argues for a common physical process underlying outflows from protostars of all masses. This latest kinematic result adds to a growing body of evidence that intermediate-mass star formation proceeds like a scaled-up version of the formation of low-mass stars.

Collimation, Acceleration, and Recollimation Shock in the Jet of Gamma-Ray Emitting Radio-loud Narrow-line Seyfert 1 Galaxy 1H0323+342

NASA Astrophysics Data System (ADS)

Hada, Kazuhiro; Doi, Akihiro; Wajima, Kiyoaki; D’Ammando, Filippo; Orienti, Monica; Giroletti, Marcello; Giovannini, Gabriele; Nakamura, Masanori; Asada, Keiichi

2018-06-01

We investigated the detailed radio structure of the jet of 1H 0323+342 using high-resolution multifrequency Very Long Baseline Array observations. This source is known as the nearest γ-ray emitting radio-loud narrow-line Seyfert 1 (NLS1) galaxy. We discovered that the morphology of the inner jet is well characterized by a parabolic shape, indicating that the jet is continuously collimated near the jet base. On the other hand, we found that the jet expands more rapidly at larger scales, resulting in a conical shape. The location of the “collimation break” is coincident with a bright quasi-stationary feature at 7 mas from core (corresponding to a deprojected distance on the order of ∼100 pc), where the jet width locally contracts together with highly polarized signals, suggesting a recollimation shock. We found that the collimation region is coincident with the region where the jet speed gradually accelerates, suggesting a coexistence of the jet acceleration and collimation zone, ending up with the recollimation shock, which could be a potential site of high-energy γ-ray flares detected by the Fermi-LAT. Remarkably, these observational features of the 1H 0323+342 jet are overall very similar to those of the nearby radio galaxy M87 and HST-1 as well as some blazars, suggesting that a common jet formation mechanism might be at work. Based on the similarity of the jet profile of the two sources, we also briefly discuss the mass of the central black hole of 1H 0323+342, which is also still highly controversial in this source and NLS1s in general.

European VLBI network observations of fourteen GHz-peaked-spectrum radio sources at 5 GHz

NASA Astrophysics Data System (ADS)

Xiang, L.; Reynolds, C.; Strom, R. G.; Dallacasa, D.

2006-08-01

We present the results of EVN polarization observations of fourteen GHz-Peaked-Spectrum (GPS) radio sources at 5 GHz. These sources were selected from bright GPS source samples and we aimed at finding Compact Symmetric Objects (CSOs). We have obtained full polarization 5 GHz VLBI observations of 14 sources providing information on their source structure and spectral indices. The results show that two core-jet sources 1433-040 and DA193, out of 14 GPS sources, exhibit integrated fractional polarizations of 3.6% and 1.0% respectively. The other 12 sources have no clear detection of pc-scale polarization. The results confirm that the GPS sources generally have very low polarization at 5 GHz. The sources 1133+432, 1824+271 and 2121-014 are confirmed as CSOs. Three new CSOs 0914+114, 1518+046 and 2322-040 (tentative) have been classified on the basis of 5 GHz images and spectral indices. The sources 1333+589, 1751+278 and 2323+790 can be classified either as compact doubles, and then they are likely CSO candidates or core-jet sources; further observations are needed for an appropriate classification; 0554-026, 1433-040 and 1509+054 are core-jet sources. In addition, we estimate that a component in the jet of quasar DA193 has superluminal motion of 3.3±0.6 h-1 c in 5.5 years.

Cosmological Distance Scale to Gamma-Ray Bursts

NASA Astrophysics Data System (ADS)

Azzam, W. J.; Linder, E. V.; Petrosian, V.

1993-05-01

The source counts or the so-called log N -- log S relations are the primary data that constrain the spatial distribution of sources with unknown distances, such as gamma-ray bursts. In order to test galactic, halo, and cosmological models for gamma-ray bursts we compare theoretical characteristics of the log N -- log S relations to those obtained from data gathered by the BATSE instrument on board the Compton Observatory (GRO) and other instruments. We use a new and statistically correct method, that takes proper account of the variable nature of the triggering threshold, to analyze the data. Constraints on models obtained by this comparison will be presented. This work is supported by NASA grants NAGW 2290, NAG5 2036, and NAG5 1578.

Computation of Large-Scale Structure Jet Noise Sources With Weak Nonlinear Effects Using Linear Euler

NASA Technical Reports Server (NTRS)

Dahl, Milo D.; Hixon, Ray; Mankbadi, Reda R.

2003-01-01

An approximate technique is presented for the prediction of the large-scale turbulent structure sound source in a supersonic jet. A linearized Euler equations code is used to solve for the flow disturbances within and near a jet with a given mean flow. Assuming a normal mode composition for the wave-like disturbances, the linear radial profiles are used in an integration of the Navier-Stokes equations. This results in a set of ordinary differential equations representing the weakly nonlinear self-interactions of the modes along with their interaction with the mean flow. Solutions are then used to correct the amplitude of the disturbances that represent the source of large-scale turbulent structure sound in the jet.

Detection, Source Location, and Analysis of Volcano Infrasound

NASA Astrophysics Data System (ADS)

McKee, Kathleen F.

The study of volcano infrasound focuses on low frequency sound from volcanoes, how volcanic processes produce it, and the path it travels from the source to our receivers. In this dissertation we focus on detecting, locating, and analyzing infrasound from a number of different volcanoes using a variety of analysis techniques. These works will help inform future volcano monitoring using infrasound with respect to infrasonic source location, signal characterization, volatile flux estimation, and back-azimuth to source determination. Source location is an important component of the study of volcano infrasound and in its application to volcano monitoring. Semblance is a forward grid search technique and common source location method in infrasound studies as well as seismology. We evaluated the effectiveness of semblance in the presence of significant topographic features for explosions of Sakurajima Volcano, Japan, while taking into account temperature and wind variations. We show that topographic obstacles at Sakurajima cause a semblance source location offset of 360-420 m to the northeast of the actual source location. In addition, we found despite the consistent offset in source location semblance can still be a useful tool for determining periods of volcanic activity. Infrasonic signal characterization follows signal detection and source location in volcano monitoring in that it informs us of the type of volcanic activity detected. In large volcanic eruptions the lowermost portion of the eruption column is momentum-driven and termed the volcanic jet or gas-thrust zone. This turbulent fluid-flow perturbs the atmosphere and produces a sound similar to that of jet and rocket engines, known as jet noise. We deployed an array of infrasound sensors near an accessible, less hazardous, fumarolic jet at Aso Volcano, Japan as an analogue to large, violent volcanic eruption jets. We recorded volcanic jet noise at 57.6° from vertical, a recording angle not normally feasible in volcanic environments. The fumarolic jet noise was found to have a sustained, low amplitude signal with a spectral peak between 7-10 Hz. From thermal imagery we measure the jet temperature ( 260 °C) and estimate the jet diameter ( 2.5 m). From the estimated jet diameter, an assumed Strouhal number of 0.19, and the jet noise peak frequency, we estimated the jet velocity to be 79 - 132 m/s. We used published gas data to then estimate the volatile flux at 160 - 270 kg/s (14,000 - 23,000 t/d). These estimates are typically difficult to obtain in volcanic environments, but provide valuable information on the eruption. At regional and global length scales we use infrasound arrays to detect signals and determine their source back-azimuths. A ground coupled airwave (GCA) occurs when an incident acoustic pressure wave encounters the Earth's surface and part of the energy of the wave is transferred to the ground. GCAs are commonly observed from sources such as volcanic eruptions, bolides, meteors, and explosions. They have been observed to have retrograde particle motion. When recorded on collocated seismo-acoustic sensors, the phase between the infrasound and seismic signals is 90°. If the sensors are separated wind noise is usually incoherent and an additional phase is added due to the sensor separation. We utilized the additional phase and the characteristic particle motion to determine a unique back-azimuth solution to an acoustic source. The additional phase will be different depending on the direction from which a wave arrives. Our technique was tested using synthetic seismo-acoustic data from a coupled Earth-atmosphere 3D finite difference code and then applied to two well-constrained datasets: Mount St. Helens, USA, and Mount Pagan, Commonwealth of the Northern Mariana Islands Volcanoes. The results from our method are within <1° - 5° of the actual and traditional infrasound array processing determined back-azimuths. Ours is a new method to detect and determine the back-azimuth to infrasonic signals, which will be useful when financial and spatial resources are limited.

The collective emission of electromagnetic waves from astrophysical jets - Luminosity gaps, BL Lacertae objects, and efficient energy transport

NASA Technical Reports Server (NTRS)

Baker, D. N.; Borovsky, Joseph E.; Benford, Gregory; Eilek, Jean A.

1988-01-01

A model of the inner portions of astrophysical jets is constructed in which a relativistic electron beam is injected from the central engine into the jet plasma. This beam drives electrostatic plasma wave turbulence, which leads to the collective emission of electromagnetic waves. The emitted waves are beamed in the direction of the jet axis, so that end-on viewing of the jet yields an extremely bright source (BL Lacertae object). The relativistic electron beam may also drive long-wavelength electromagnetic plasma instabilities (firehose and Kelvin-Helmholtz) that jumble the jet magnetic field lines. After a sufficient distance from the core source, these instabilities will cause the beamed emission to point in random directions and the jet emission can then be observed from any direction relative to the jet axis. This combination of effects may lead to the gap turn-on of astrophysical jets. The collective emission model leads to different estimates for energy transport and the interpretation of radio spectra than the conventional incoherent synchrotron theory.

Assessment of Current Jet Noise Prediction Capabilities

NASA Technical Reports Server (NTRS)

Hunter, Craid A.; Bridges, James E.; Khavaran, Abbas

2008-01-01

An assessment was made of the capability of jet noise prediction codes over a broad range of jet flows, with the objective of quantifying current capabilities and identifying areas requiring future research investment. Three separate codes in NASA s possession, representative of two classes of jet noise prediction codes, were evaluated, one empirical and two statistical. The empirical code is the Stone Jet Noise Module (ST2JET) contained within the ANOPP aircraft noise prediction code. It is well documented, and represents the state of the art in semi-empirical acoustic prediction codes where virtual sources are attributed to various aspects of noise generation in each jet. These sources, in combination, predict the spectral directivity of a jet plume. A total of 258 jet noise cases were examined on the ST2JET code, each run requiring only fractions of a second to complete. Two statistical jet noise prediction codes were also evaluated, JeNo v1, and Jet3D. Fewer cases were run for the statistical prediction methods because they require substantially more resources, typically a Reynolds-Averaged Navier-Stokes solution of the jet, volume integration of the source statistical models over the entire plume, and a numerical solution of the governing propagation equation within the jet. In the evaluation process, substantial justification of experimental datasets used in the evaluations was made. In the end, none of the current codes can predict jet noise within experimental uncertainty. The empirical code came within 2dB on a 1/3 octave spectral basis for a wide range of flows. The statistical code Jet3D was within experimental uncertainty at broadside angles for hot supersonic jets, but errors in peak frequency and amplitude put it out of experimental uncertainty at cooler, lower speed conditions. Jet3D did not predict changes in directivity in the downstream angles. The statistical code JeNo,v1 was within experimental uncertainty predicting noise from cold subsonic jets at all angles, but did not predict changes with heating of the jet and did not account for directivity changes at supersonic conditions. Shortcomings addressed here give direction for future work relevant to the statistical-based prediction methods. A full report will be released as a chapter in a NASA publication assessing the state of the art in aircraft noise prediction.

What a Girl! Fighting Gentleness in the Picture Book World: An Analysis of the Norwegian Picture Book "What a Girl!" by Gro Dahle and Svein Nyhus

ERIC Educational Resources Information Center

Maagerø, Eva; Østbye, Guri Lorentzen

2017-01-01

The Norwegian picture book "What a Girl!" (original title "Snill") by Gro Dahle and Svein Nyhus was published 2011 and immediately gained a large audience. The book tells the story about a girl who always behaves in the ways expected of her: she never confronts her parents, her teacher or her classmates. This behaviour makes…

The statistical big bang of 1911: ideology, technological innovation and the production of medical statistics.

PubMed

Higgs, W

1996-12-01

This paper examines the relationship between intellectual debate, technologies for analysing information, and the production of statistics in the General Register Office (GRO) in London in the early twentieth century. It argues that controversy between eugenicists and public health officials respecting the cause and effect of class-specific variations in fertility led to the introduction of questions in the 1911 census on marital fertility. The increasing complexity of the census necessitated a shift from manual to mechanised forms of data processing within the GRO. The subsequent increase in processing power allowed the GRO to make important changes to the medical and demographic statistics it published in the annual Reports of the Registrar General. These included substituting administrative sanitary districts for registration districts as units of analysis, consistently transferring deaths in institutions back to place of residence, and abstracting deaths according to the International List of Causes of Death.

SN 1991T - Gamma-Ray Observatory's first supernova?

NASA Technical Reports Server (NTRS)

Burrows, Adam; Shankar, Anurag; Van Riper, Kenneth A.

1991-01-01

Consideration is given to the explosion of the Type Ia supernova SN 1991T in the nearby galaxy NGC 4527 detected in gamma-ray lines by the recently launched GRO. The dominant gamma-line and continuum features of the new 'delayed detonation' model FDEFA1 are calculated and compared to those for standard deflagration models W7 and cdtg7. It is shown that there are many useful hard photon discriminants of the Type Ia explosion mechanism that can, in principle, be detected by the OSSE and COMPTEL instruments on the GRO. Either SN 1991T, if bright enough, or one of the several Type Ia supernovae expected to be within the GRO's range during its active life, may make it possible to settle the detonation/deflagration debate, verify the generic thermonuclear white dwarf model of Type Ia explosions, and calibrate the Type Ia B(max)/847 keV line flux ratio.

Hubble Space Telescope scale 3D simulations of MHD disc winds: a rotating two-component jet structure

NASA Astrophysics Data System (ADS)

Staff, J. E.; Koning, N.; Ouyed, R.; Thompson, A.; Pudritz, R. E.

2015-02-01

We present the results of large scale, three-dimensional magnetohydrodynamics simulations of disc winds for different initial magnetic field configurations. The jets are followed from the source to 90 au scale, which covers several pixels of Hubble Space Telescope images of nearby protostellar jets. Our simulations show that jets are heated along their length by many shocks. We compute the emission lines that are produced, and find excellent agreement with observations. The jet width is found to be between 20 and 30 au while the maximum velocities perpendicular to the jet are found to be up to above 100 km s-1. The initially less open magnetic field configuration simulations result in a wider, two-component jet; a cylindrically shaped outer jet surrounding a narrow and much faster, inner jet. These simulations preserve the underlying Keplerian rotation profile of the inner jet to large distances from the source. However, for the initially most open magnetic field configuration the kink mode creates a narrow corkscrew-like jet without a clear Keplerian rotation profile and even regions where we observe rotation opposite to the disc (counter-rotating). The RW Aur jet is narrow, indicating that the disc field in that case is very open meaning the jet can contain a counter-rotating component that we suggest explains why observations of rotation in this jet have given confusing results. Thus magnetized disc winds from underlying Keplerian discs can develop rotation profiles far down the jet that is not Keplerian.

First application of liquid-metal-jet sources for small-animal imaging: high-resolution CT and phase-contrast tumor demarcation.

PubMed

Larsson, Daniel H; Lundström, Ulf; Westermark, Ulrica K; Arsenian Henriksson, Marie; Burvall, Anna; Hertz, Hans M

2013-02-01

Small-animal studies require images with high spatial resolution and high contrast due to the small scale of the structures. X-ray imaging systems for small animals are often limited by the microfocus source. Here, the authors investigate the applicability of liquid-metal-jet x-ray sources for such high-resolution small-animal imaging, both in tomography based on absorption and in soft-tissue tumor imaging based on in-line phase contrast. The experimental arrangement consists of a liquid-metal-jet x-ray source, the small-animal object on a rotating stage, and an imaging detector. The source-to-object and object-to-detector distances are adjusted for the preferred contrast mechanism. Two different liquid-metal-jet sources are used, one circulating a Ga∕In∕Sn alloy and the other an In∕Ga alloy for higher penetration through thick tissue. Both sources are operated at 40-50 W electron-beam power with ∼7 μm x-ray spots, providing high spatial resolution in absorption imaging and high spatial coherence for the phase-contrast imaging. High-resolution absorption imaging is demonstrated on mice with CT, showing 50 μm bone details in the reconstructed slices. High-resolution phase-contrast soft-tissue imaging shows clear demarcation of mm-sized tumors at much lower dose than is required in absorption. This is the first application of liquid-metal-jet x-ray sources for whole-body small-animal x-ray imaging. In absorption, the method allows high-resolution tomographic skeletal imaging with potential for significantly shorter exposure times due to the power scalability of liquid-metal-jet sources. In phase contrast, the authors use a simple in-line arrangement to show distinct tumor demarcation of few-mm-sized tumors. This is, to their knowledge, the first small-animal tumor visualization with a laboratory phase-contrast system.

Reductions in Multi-Component Jet Noise by Water Injection

NASA Technical Reports Server (NTRS)

Norum, Thomas D.

2004-01-01

An experimental investigation was performed in the NASA Langley Low Speed Aeroacoustics Wind Tunnel to determine the extent of jet exhaust noise reduction that can be obtained using water injection in a hot jet environment. The effects of water parameters such as mass flow rate, injection location, and spray patterns on suppression of dominant noise sources in both subsonic and supersonic jets were determined, and extrapolations to full-scale engine noise reduction were made. Water jets and sprays were injected in to the shear layers of cold and hot circular jets operating at both subsonic and supersonic exhaust conditions. Use of convergent-divergent and convergent nozzles (2.7in. D) allowed for simulations of all major jet noise sources. The experimental results show that water injection clearly disrupts shock noise sources within the jet plume, with large reductions in radiated shock noise. There are smaller reductions in jet mixing noise, resulting in only a small decrease in effective perceived noise level when projections are made to full scale. The fact that the measured noise reduction in the direction upstream of the nozzle was consistently larger than in the noisier downstream direction contributed to keeping effective perceived noise reductions small. Variations in the operation of the water injection system clearly show that injection at the nozzle exit rather than further downstream is required for the largest noise reduction. Noise reduction increased with water pressure as well as with its mass flow, although the type of injector had little effect.

Confrontation of the Magnetically Arrested Disc scenario with observations of FR II sources

NASA Astrophysics Data System (ADS)

Rusinek, Katarzyna; Sikora, Marek

2017-10-01

The main aim of our work was to check whether powers of jets in FR II radio galaxies (RGs) and quasars (QSOs) can be reproduced by the Magnetically Arrested Disc (MAD) scenario. Assuming that established in the recent numerical simulations of the MAD scenario the (H/R)^2 dependence of the jet production efficiency is correct, we demonstrate that in order to reproduce the observed jet powers in FR II sources: (i) accretion discs must be geometrically much thicker than the standard ones; (ii) and/or that the jet production is strongly modulated.

Theoretical study of refraction effects on noise produced by turbulent jets

NASA Technical Reports Server (NTRS)

Graham, E. W.; Graham, B. B.

1975-01-01

The transmission of acoustic disturbances from the interior of a jet into the ambient air is studied. The jet is assumed infinitely long with mean velocity profile independent of streamwise location. The noise generator is a sequence of transient sources drifting with the local fluid and confined to a short length of the jet. In Part 1, supersonic jets are considered. Numerical results for mean-square pressure versus angle in the far-field show unexpected peaks which are very sharp. Analysis of simplified models indicates that these are complex quasi-resonant effects which appear to the stationary observer in a high frequency range. The peaks are real for the idealized model, but would be smoothed by mathematical integration over source position, velocity, and frequency. Subsonic jets were considered in part 2, and a preliminary study of the near-field was attempted. Mean-square radial displacements (or mean radial energy flow or space-time correlations of radial pressure gradient) are first found for very simple cases. The most difficult case studied is a sequence of transient sources at the center of a uniform-velocity circular cylindrical jet. Here a numerical triple integration is required and seems feasible although only preliminary results for mean square radial displacement are now available. These preliminary results show disturbances decreasing with increasing radial distance, and with increasing distance upstream and downstream from the source. A trend towards greater downstream disturbances appears even in the near field.

Influence of Mean-Density Gradient on Small-Scale Turbulence Noise

NASA Technical Reports Server (NTRS)

Khavaran, Abbas

2000-01-01

A physics-based methodology is described to predict jet-mixing noise due to small-scale turbulence. Both self- and shear-noise source teens of Lilley's equation are modeled and the far-field aerodynamic noise is expressed as an integral over the jet volume of the source multiplied by an appropriate Green's function which accounts for source convection and mean-flow refraction. Our primary interest here is to include transverse gradients of the mean density in the source modeling. It is shown that, in addition to the usual quadrupole type sources which scale to the fourth-power of the acoustic wave number, additional dipole and monopole sources are present that scale to lower powers of wave number. Various two-point correlations are modeled and an approximate solution to noise spectra due to multipole sources of various orders is developed. Mean flow and turbulence information is provided through RANS-k(epsilon) solution. Numerical results are presented for a subsonic jet at a range of temperatures and Mach numbers. Predictions indicated a decrease in high frequency noise with added heat, while changes in the low frequency noise depend on jet velocity and observer angle.

Purification and functional characterization of p16, the ATPase of the bacteriophage Φ29 packaging machinery

PubMed Central

Ibarra, Borja; Valpuesta, José María; Carrascosa, José L.

2001-01-01

Bacteriophage Φ29 codes for a protein (p16) that is required for viral DNA packaging both in vivo and in vitro. Co-expression of p16 with the chaperonins GroEL and GroES has allowed its purification in a soluble form. Purified p16 shows a weak ATPase activity that is stimulated by either DNA or RNA, irrespective of the presence of any other viral component. The stimulation of ATPase activity of p16, although induced under packaging conditions, is not dependent of the actual DNA packaging and in this respect the Φ29 enzyme is similar to other viral terminases. Protein p16 competes with DNA and RNA in the interaction with the viral prohead, which occurs through the N-terminal region of the connector protein (p10). In fact, p16 interacts in a nucleotide-dependent fashion with the viral Φ29-encoded RNA (pRNA) involved in DNA packaging, and this binding can be competed with DNA. Our results are consistent with a model for DNA translocation in which p16, bound and organized around the connector, acts as a power stroke to pump the DNA into the prohead, using the hydrolysis of ATP as an energy source. PMID:11691914

Purification and functional characterization of p16, the ATPase of the bacteriophage Phi29 packaging machinery.

PubMed

Ibarra, B; Valpuesta, J M; Carrascosa, J L

2001-11-01

Bacteriophage Phi29 codes for a protein (p16) that is required for viral DNA packaging both in vivo and in vitro. Co-expression of p16 with the chaperonins GroEL and GroES has allowed its purification in a soluble form. Purified p16 shows a weak ATPase activity that is stimulated by either DNA or RNA, irrespective of the presence of any other viral component. The stimulation of ATPase activity of p16, although induced under packaging conditions, is not dependent of the actual DNA packaging and in this respect the Phi29 enzyme is similar to other viral terminases. Protein p16 competes with DNA and RNA in the interaction with the viral prohead, which occurs through the N-terminal region of the connector protein (p10). In fact, p16 interacts in a nucleotide-dependent fashion with the viral Phi29-encoded RNA (pRNA) involved in DNA packaging, and this binding can be competed with DNA. Our results are consistent with a model for DNA translocation in which p16, bound and organized around the connector, acts as a power stroke to pump the DNA into the prohead, using the hydrolysis of ATP as an energy source.

Baryons in the relativistic jets of the stellar-mass black-hole candidate 4U 1630-47.

PubMed

Trigo, María Díaz; Miller-Jones, James C A; Migliari, Simone; Broderick, Jess W; Tzioumis, Tasso

2013-12-12

Accreting black holes are known to power relativistic jets, both in stellar-mass binary systems and at the centres of galaxies. The power carried away by the jets, and, hence, the feedback they provide to their surroundings, depends strongly on their composition. Jets containing a baryonic component should carry significantly more energy than electron-positron jets. Energetic considerations and circular-polarization measurements have provided conflicting circumstantial evidence for the presence or absence of baryons in jets, and the only system in which they have been unequivocally detected is the peculiar X-ray binary SS 433 (refs 4, 5). Here we report the detection of Doppler-shifted X-ray emission lines from a more typical black-hole candidate X-ray binary, 4U 1630-47, coincident with the reappearance of radio emission from the jets of the source. We argue that these lines arise from baryonic matter in a jet travelling at approximately two-thirds the speed of light, thereby establishing the presence of baryons in the jet. Such baryonic jets are more likely to be powered by the accretion disk than by the spin of the black hole, and if the baryons can be accelerated to relativistic speeds, the jets should be strong sources of γ-rays and neutrino emission.

PROPER MOTIONS OF THE OUTER KNOTS OF THE HH 80/81/80N RADIO-JET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masqué, Josep M.; Rodriguez, Luis F.; Carrasco-González, Carlos

2015-11-20

The radio-knots of the Herbig–Haro (HH) 80/81/80N jet extend from the HH 80 object to the recently discovered Source 34 and has a total projected jet size of 10.3 pc, constituting the largest collimated radio-jet system known so far. It is powered by the bright infrared source IRAS 18162−2048 associated with a massive young stellar object. We report 6 cm JVLA observations that, compared with previous 6 cm VLA observations carried out in 1989, allow us to derive proper motions of the HH 80, HH 81, and HH 80N radio knots located about 2.5 pc away in projection from themore » powering source. For the first time, we measure proper motions of the optically obscured HH 80N object providing evidence that this knot, along with HH 81 and HH 80 are associated with the same radio-jet. We also confirm the presence of Source 34, located further north of HH 80N, previously proposed to belong to the jet.We derived that the tangential velocity of HH 80N is 260 km s{sup −1} and has a direction in agreement with the expected direction of a ballistic precessing jet. The HH 80 and HH 81 objects have tangential velocities of 350 and 220 km s{sup −1}, respectively, but their directions are somewhat deviated from the expected jet path. The velocities of the HH objects studied in this work are significantly lower than those derived for the radio knots of the jet close to the powering source (600–1400 km s{sup −1}) suggesting that the jet is slowing down due to a strong interaction with the ambient medium. As a result, since HH 80 and HH 81 are located near the edge of the cloud, the inhomogeneous and low density medium may contribute to skew the direction of their determined proper motions. The HH 80 and HH 80N emission at 6 cm is, at least in part, probably synchrotron radiation produced by relativistic electrons in a magnetic field of 1 mG. If these electrons are accelerated in a reverse adiabatic shock, we estimate a jet total density of ≲1000 cm{sup −3}. All of these features are consistent with a jet emanating from a high-mass protostar and make evident its capability of accelerating particles up to relativistic velocities.« less

On the structure and stability of magnetic tower jets

DOE PAGES

Huarte-Espinosa, M.; Frank, A.; Blackman, E. G.; ...

2012-09-05

Modern theoretical models of astrophysical jets combine accretion, rotation, and magnetic fields to launch and collimate supersonic flows from a central source. Near the source, magnetic field strengths must be large enough to collimate the jet requiring that the Poynting flux exceeds the kinetic energy flux. The extent to which the Poynting flux dominates kinetic energy flux at large distances from the engine distinguishes two classes of models. In magneto-centrifugal launch models, magnetic fields dominate only at scales <~ 100 engine radii, after which the jets become hydrodynamically dominated (HD). By contrast, in Poynting flux dominated (PFD) magnetic tower models,more » the field dominates even out to much larger scales. To compare the large distance propagation differences of these two paradigms, we perform three-dimensional ideal magnetohydrodynamic adaptive mesh refinement simulations of both HD and PFD stellar jets formed via the same energy flux. We also compare how thermal energy losses and rotation of the jet base affects the stability in these jets. For the conditions described, we show that PFD and HD exhibit observationally distinguishable features: PFD jets are lighter, slower, and less stable than HD jets. Here, unlike HD jets, PFD jets develop current-driven instabilities that are exacerbated as cooling and rotation increase, resulting in jets that are clumpier than those in the HD limit. Our PFD jet simulations also resemble the magnetic towers that have been recently created in laboratory astrophysical jet experiments.« less

Orbital Spacecraft Consumables Resupply System (OSCRS). Volume 2: Study results

NASA Technical Reports Server (NTRS)

1987-01-01

The objective was to establish an earth storable fluids tanker concept which satisfies the initial resupply requirements for the Gamma Ray Observatory (GRO) for reasonable front end (design, development, verification) cost while providing growth potential for foreseeable future earth storable resupply mission requirements. The achievement of these objectives becomes possible with the development of a modularized tanker concept which is a hybrid of a dedicated GRO tanker and a generic earth storable propellant tanker.

Gamma rays from active galactic nuclei

NASA Technical Reports Server (NTRS)

Kazanas, Demosthenes

1990-01-01

The general properties of Active Galactic Nuclei (AGN) and quasars are reviewed with emphasis on their continuum spectral emission. Two general classes of models for the continuum are outlined and critically reviewed in view of the impending GRO (Gamma Ray Observatory) launch and observations. The importance of GRO in distinguishing between these models and in general in furthering the understanding of AGN is discussed. The very broad terms the status of the current understanding of AGN are discussed.

Coexistence of group I and group II chaperonins in the archaeon Methanosarcina mazei.

PubMed

Klunker, Daniel; Haas, Bernd; Hirtreiter, Angela; Figueiredo, Luis; Naylor, Dean J; Pfeifer, Günter; Müller, Volker; Deppenmeier, Uwe; Gottschalk, Gerhard; Hartl, F Ulrich; Hayer-Hartl, Manajit

2003-08-29

Two distantly related classes of cylindrical chaperonin complexes assist in the folding of newly synthesized and stress-denatured proteins in an ATP-dependent manner. Group I chaperonins are thought to be restricted to the cytosol of bacteria and to mitochondria and chloroplasts, whereas the group II chaperonins are found in the archaeal and eukaryotic cytosol. Here we show that members of the archaeal genus Methanosarcina co-express both the complete group I (GroEL/GroES) and group II (thermosome/prefoldin) chaperonin systems in their cytosol. These mesophilic archaea have acquired between 20 and 35% of their genes by lateral gene transfer from bacteria. In Methanosarcina mazei Gö1, both chaperonins are similarly abundant and are moderately induced under heat stress. The M. mazei GroEL/GroES proteins have the structural features of their bacterial counterparts. The thermosome contains three paralogous subunits, alpha, beta, and gamma, which assemble preferentially at a molar ratio of 2:1:1. As shown in vitro, the assembly reaction is dependent on ATP/Mg2+ or ADP/Mg2+ and the regulatory role of the beta subunit. The co-existence of both chaperonin systems in the same cellular compartment suggests the Methanosarcina species as useful model systems in studying the differential substrate specificity of the group I and II chaperonins and in elucidating how newly synthesized proteins are sorted from the ribosome to the proper chaperonin for folding.

Actinomyces naeslundii GroEL-dependent initial attachment and biofilm formation in a flow cell system.

PubMed

Arai, Toshiaki; Ochiai, Kuniyasu; Senpuku, Hidenobu

2015-02-01

Actinomyces naeslundii is an early colonizer with important roles in the development of the oral biofilm. The effects of butyric acid, one of short chain fatty acids in A. naeslundii biofilm formation was observed using a flow cell system with Tryptic soy broth without dextrose and with 0.25% sucrose (TSB sucrose). Significant biofilms were established involving live and dead cells in TSB sucrose with 60mM butyric acid but not in concentrations of 6, 30, 40, and 50mM. Biofilm formation failed in 60mM sodium butyrate but biofilm level in 60mM sodium butyrate (pH4.7) adjusted with hydrochloric acid as 60mM butyric media (pH4.7) was similar to biofilm levels in 60mM butyric acid. Therefore, butyric acid and low pH are required for significant biofilm formation in the flow cell. To determine the mechanism of biofilm formation, we investigated initial A. naeslundii colonization in various conditions and effects of anti-GroEL antibody. The initial colonization was observed in the 60mM butyric acid condition and anti-GroEL antibody inhibited the initial colonization. In conclusion, we established a new biofilm formation model in which butyric acid induces GroEL-dependent initial colonization of A. naeslundii resulting in significant biofilm formation in a flow system. Copyright © 2014 Elsevier B.V. All rights reserved.

Fabrication of highly catalytic silver nanoclusters/graphene oxide nanocomposite as nanotag for sensitive electrochemical immunoassay.

PubMed

Wang, Jiamian; Wang, Xiuyun; Wu, Shuo; Song, Jie; Zhao, Yanqiu; Ge, Yanqiu; Meng, Changgong

2016-02-04

Silver nanoclusters and graphene oxide nanocomposite (AgNCs/GRO) is synthesized and functionalized with detection antibody for highly sensitive electrochemical sensing of carcinoembryonic antigen (CEA), a model tumor marker involved in many cancers. AgNCs with large surface area and abundant amount of low-coordinated sites are synthesized with DNA as template and exhibit high catalytic activity towards the electrochemical reduction of H2O2. GRO is employed to assemble with AgNCs because it has large specific surface area, super electronic conductivity and strong π-π stacking interaction with the hydrophobic bases of DNA, which can further improve the catalytic ability of the AgNCs. Using AgNCs/GRO as signal amplification tag, an enzyme-free electrochemical immunosensing protocol is designed for the highly sensitive detection of CEA on the capture antibody functionalized immunosensing interface. Under optimal conditions, the designed immunosensor exhibits a wide linear range from 0.1 pg mL(-1) to 100 ng mL(-1) and a low limit of detection of 0.037 pg mL(-1). Practical sample analysis reveals the sensor has good accuracy and reproducibility, indicating the great application prospective of the AgNCs/GRO in fabricating highly sensitive immunosensors, which can be extended to the detection of various kinds of low abundance disease related proteins. Copyright © 2015 Elsevier B.V. All rights reserved.

Detection of antistaphylococcal and toxic compounds by biological assay systems developed with a reporter Staphylococcus aureus strain harboring a heat inducible promoter - lacZ transcriptional fusion.

PubMed

Chanda, Palas Kumar; Ganguly, Tridib; Das, Malabika; Lee, Chia Yen; Luong, Thanh T; Sau, Subrata

2007-11-30

Previously it was reported that promoter of groES-groEL operon of Staphylococcus aureus is induced by various cell-wall active antibiotics. In order to exploit the above promoter for identifying novel antistaphylococcal drugs, we have cloned the promoter containing region (P(g)) of groES-groEL operon of S. aureus Newman and found that the above promoter is induced by sublethal concentrations of many antibiotics including cell-wall active antibiotics. A reporter S. aureus RN4220 strain (designated SAU006) was constructed by inserting the P(g)-lacZ transcriptional fusion into its chromosome. Agarose-based assay developed with SAU006 shows that P(g) in single-copy is also induced distinctly by different classes of antibiotics. Data indicate that ciprofloxacin, rifampicin, ampicillin, and cephalothin are strong inducers, whereas, tetracycline, streptomycin and vancomycin induce the above promoter weakly. Sublethal concentrations of ciprofloxacin and ampicilin even have induced P(g) efficiently in microtiter plate grown SAU006. Additional studies show for the first time that above promoter is also induced weakly by arsenate salt and hydrogen peroxide. Taken together, we suggest that our simple and sensitive assay systems with SAU006 could be utilized for screening and detecting not only novel antistaphylococcal compounds but also different toxic chemicals.

Refraction and Shielding of Noise in Non-Axisymmetric Jets

NASA Technical Reports Server (NTRS)

Khavaran, Abbas

1996-01-01

This paper examines the shielding effect of the mean flow and refraction of sound in non-axisymmetric jets. A general three-dimensional ray-acoustic approach is applied. The methodology is independent of the exit geometry and may account for jet spreading and transverse as well as streamwise flow gradients. We assume that noise is dominated by small-scale turbulence. The source correlation terms, as described by the acoustic analogy approach, are simplified and a model is proposed that relates the source strength to 7/2 power of turbulence kinetic energy. Local characteristics of the source such as its strength, time- or length-scale, convection velocity and characteristic frequency are inferred from the mean flow considerations. Compressible Navier Stokes equations are solved with a k-e turbulence model. Numerical predictions are presented for a Mach 1.5, aspect ratio 2:1 elliptic jet. The predicted sound pressure level directivity demonstrates favorable agreement with reported data, indicating a relative quiet zone on the side of the major axis of the elliptic jet.

Experimental and Analytical Studies of Shielding Concepts for Point Sources and Jet Noises.

NASA Astrophysics Data System (ADS)

Wong, Raymond Lee Man

This analytical and experimental study explores concepts for jet noise shielding. Model experiments centre on solid planar shields, simulating engine-over-wing installations, and 'sugar scoop' shields. Tradeoff on effective shielding length is set by interference 'edge noise' as the shield trailing edge approaches the spreading jet. Edge noise is minimized by (i) hyperbolic cutouts which trim off the portions of most intense interference between the jet flow and the barrier and (ii) hybrid shields--a thermal refractive extension (a flame); for (ii) the tradeoff is combustion noise. In general, shielding attenuation increases steadily with frequency, following low frequency enhancement by edge noise. Although broadband attenuation is typically only several dB, the reduction of the subjectively weighted perceived noise levels is higher. In addition, calculated ground contours of peak PN dB show a substantial contraction due to shielding: this reaches 66% for one of the 'sugar scoop' shields for the 90 PN dB contour. The experiments are complemented by analytical predictions. They are divided into an engineering scheme for jet noise shielding and more rigorous analysis for point source shielding. The former approach combines point source shielding with a suitable jet source distribution. The results are synthesized into a predictive algorithm for jet noise shielding: the jet is modelled as a line distribution of incoherent sources with narrow band frequency (TURN)(axial distance)('-1). The predictive version agrees well with experiment (1 to 1.5 dB) up to moderate frequencies. The insertion loss deduced from the point source measurements for semi-infinite as well as finite rectangular shields agrees rather well with theoretical calculation based on the exact half plane solution and the superposition of asymptotic closed-form solutions. An approximate theory, the Maggi-Rubinowicz line integral, is found to yield reasonable predictions for thin barriers including cutouts if a certain correction is applied. The more exact integral equation approach (solved numerically) is applied to a more demanding geometry: a half round sugar scoop shield. It is found that the solutions of integral equation derived from Helmholtz formula in normal derivative form show satisfactory agreement with measurements.

Studies on cryogenic Xe capillary jet target for laser-produced plasma EUV-light source

NASA Astrophysics Data System (ADS)

Inoue, T.; Nica, P. E.; Kaku, K.; Shimoura, A.; Amano, S.; Miyamoto, S.; Mochizuki, T.

2006-03-01

In this paper, characterizations of a cryogenic Xe capillary jet target for a laser-produced plasma extreme ultraviolet (EUV) light source are reported. The capillary jet target is a candidate of fast-supplying targets for mitigating debris generation and target consumption in a vacuum chamber without reducing the EUV conversion efficiency. Xe capillary jets (jet velocity ~ 0.4 m/s) were generated in vacuum by using annular nozzles chilled to ~ 170 K at a Xe backing pressure of ~ 0.7 MPa. Forming mechanisms of the capillary jet targets were studied by using numerical calculations. Furthermore, laser-produced plasma EUV generation was performed by irradiating a Nd:YAG laser (1064 nm, ~ 0.5 J, 10 ns, 120 μmφ, ~ 4×10 11 W/cm2) on a Xe capillary jet target (outer / inner diameter = 100 / 70 μmφ). The angular distribution of EUV generation was approximately uniform around the Xe capillary jet target, and the peak kinetic energy of the fast-ions was evaluated to be ~ 2 keV.

Thermal winds in stellar mass black hole and neutron star binary systems

NASA Astrophysics Data System (ADS)

Done, Chris; Tomaru, Ryota; Takahashi, Tadayuki

2018-01-01

Black hole binaries show equatorial disc winds at high luminosities, which apparently disappear during the spectral transition to the low/hard state. This is also where the radio jet appears, motivating speculation that both wind and jet are driven by different configurations of the same magnetic field. However, these systems must also have thermal winds, as the outer disc is clearly irradiated. We develop a predictive model of the absorption features from thermal winds, based on pioneering work of Begelman, McKee & Shields. We couple this to a realistic model of the irradiating spectrum as a function of luminosity to predict the entire wind evolution during outbursts. We show that the column density of the thermal wind scales roughly with luminosity, and does not shut off at the spectral transition, though its visibility will be affected by the abrupt change in ionizing spectrum. We re-analyse the data from H1743-322, which most constrains the difference in wind across the spectral transition, and show that these are consistent with the thermal wind models. We include simple corrections for radiation pressure, which allows stronger winds to be launched from smaller radii. These winds become optically thick around Eddington, which may even explain the exceptional wind seen in one observation of GRO J1655-40. These data can instead be fit by magnetic wind models, but similar winds are not seen in this or other systems at similar luminosities. Hence, we conclude that the majority (perhaps all) of current data can be explained by thermal or thermal-radiative winds.

Lighting system with thermal management system having point contact synthetic jets

DOEpatents

Arik, Mehmet; Weaver, Stanton Earl; Kuenzler, Glenn Howard; Wolfe, Jr., Charles Franklin; Sharma, Rajdeep

2013-12-10

Lighting system having unique configurations are provided. For instance, the lighting system may include a light source, a thermal management system and driver electronics, each contained within a housing structure. The light source is configured to provide illumination visible through an opening in the housing structure. The thermal management system includes a plurality of synthetic jets. The synthetic jets are arranged within the lighting system such that they are secured at contact points.

Lighting system with thermal management system having point contact synthetic jets

DOEpatents

Arik, Mehmet; Weaver, Stanton Earl; Kuenzler, Glenn Howard; Wolfe, Jr, Charles Franklin; Sharma, Rajdeep

2016-08-30

Lighting systems having unique configurations are provided. For instance, the lighting system may include a light source, a thermal management system and driver electronics, each contained within a housing structure. The light source is configured to provide illumination visible through an opening in the housing structure. The thermal management system includes a plurality of synthetic jets. The synthetic jets are arranged within the lighting system such that they are secured at contact points.

Lighting system with thermal management system having point contact synthetic jets

DOEpatents

Arik, Mehmet; Weaver, Stanton Earl; Kuenzler, Glenn Howard; Wolfe, Jr., Charles Franklin; Sharma, Rajdeep

2016-08-23

Lighting systems having unique configurations are provided. For instance, the lighting system may include a light source, a thermal management system and driver electronics, each contained within a housing structure. The light source is configured to provide illumination visible through an opening in the housing structure. The thermal management system includes a plurality of synthetic jets. The synthetic jets are arranged within the lighting system such that they are secured at contact points.

Jet Noise Physics and Modeling Using First-principles Simulations

NASA Technical Reports Server (NTRS)

Freund, Jonathan B.

2003-01-01

An extensive analysis of our jet DNS database has provided for the first time the complex correlations that are the core of many statistical jet noise models, including MGBK. We have also for the first time explicitly computed the noise from different components of a commonly used noise source as proposed in many modeling approaches. Key findings are: (1) While two-point (space and time) velocity statistics are well-fitted by decaying exponentials, even for our low-Reynolds-number jet, spatially integrated fourth-order space/retarded-time correlations, which constitute the noise "source" in MGBK, are instead well-fitted by Gaussians. The width of these Gaussians depends (by a factor of 2) on which components are considered. This is counter to current modeling practice, (2) A standard decomposition of the Lighthill source is shown by direct evaluation to be somewhat artificial since the noise from these nominally separate components is in fact highly correlated. We anticipate that the same will be the case for the Lilley source, and (3) The far-field sound is computed in a way that explicitly includes all quadrupole cancellations, yet evaluating the Lighthill integral for only a small part of the jet yields a far-field noise far louder than that from the whole jet due to missing nonquadrupole cancellations. Details of this study are discussed in a draft of a paper included as appendix A.

Tandem differential mobility analysis-mass spectrometry reveals partial gas-phase collapse of the GroEL complex.

PubMed

Hogan, Christopher J; Ruotolo, Brandon T; Robinson, Carol V; Fernandez de la Mora, Juan

2011-04-07

A parallel-plate differential mobility analyzer and a time-of-flight mass spectrometer (DMA-MS) are used in series to measure true mobility in dry atmospheric pressure air for mass-resolved electrosprayed GroEL tetradecamers (14-mers; ~800 kDa). Narrow mobility peaks are found (2.6-2.9% fwhm); hence, precise mobilities can be obtained for these ions without collisional activation, just following their generation by electrospray ionization. In contrast to previous studies, two conformers are found with mobilities (Z) differing by ~5% at charge state z ~ 79. By extrapolating to small z, a common mobility/charge ratio Z(0)/z = 0.0117 cm(2) V(-1) s(-1) is found for both conformers. When interpreted as if the GroEL ion surface were smooth and the gas molecule-protein collisions were perfectly elastic and specular, this mobility yields an experimental collision cross section, Ω, 11% smaller than in an earlier measurement, and close to the cross section, A(C,crystal), expected for the crystal structure (determined by a geometric approximation). However, the similarity between Ω and A(C,crystal) does not imply a coincidence between the native and gas-phase structures. The nonideal nature of protein-gas molecule collisions introduces a drag enhancement factor, ξ = 1.36, with which the true cross section A(C) is related to Ω via A(C) = Ω/ξ. Therefore, A(C) for GroEL 14-mer ions determined by DMA measurements is 0.69A(C,crystal). The factor 1.36 used here is based on the experimental Stokes-Millikan equation, as well as on prior and new numerical modeling accounting for multiple scattering events via exact hard-sphere scattering calculations. Therefore, we conclude that the gas-phase structure of the GroEL complex as electrosprayed is substantially more compact than the corresponding X-ray crystal structure.

Chaperonin-based biolayer interferometry to assess the kinetic stability of metastable, aggregation-prone proteins

PubMed Central

Lea, Wendy A.; Naik, Subhashchandra; Chaudhri, Tapan; Machen, Alexandra J.; O’Neil, Pierce T.; McGinn-Straub, Wesley; Tischer, Alexander; Auton, Matthew T.; Burns, Joshua R.; Baldwin, Michael R.; Khar, Karen R.; Karanicolas, John; Fisher, Mark T.

2017-01-01

Stabilizing the folded state of metastable and/or aggregation-prone proteins through exogenous ligand binding is an appealing strategy to decrease disease pathologies brought on by protein folding defects or deleterious kinetic transitions. Current methods of examining ligand binding to these marginally stable native states are limited, because protein aggregation typically interferes with analysis. Here, we describe a rapid method for assessing the kinetic stability of folded proteins and monitoring the effects of ligand stabilization for both intrinsically stable proteins (monomers, oligomers, multi-domain) and metastable proteins (e.g. low Tm) that uses a new GroEL chaperonin-based biolayer interferometry (BLI) denaturant-pulse platform. A kinetically controlled denaturation isotherm is generated by exposing a target protein immobilized on a BLI biosensor to increasing denaturant concentrations (urea or GnHCl) in a pulsatile manner to induce partial or complete unfolding of the attached protein population. Following the rapid removal of the denaturant, the extent of hydrophobic unfolded/partially folded species that remain is detected by increased GroEL binding. Since this kinetic denaturant pulse is brief, the amplitude of the GroEL binding to the immobilized protein depends on the duration of exposure to denaturant, the concentration of denaturant, wash times, and the underlying protein unfolding/refolding kinetics; fixing all other parameters and plotting GroEL binding amplitude versus denaturant pulse concentration results in a kinetically controlled denaturation isotherm. When folding osmolytes or stabilizing ligands are added to the immobilized target proteins before and during the denaturant pulse, the diminished population of unfolded/partially folded protein is manifested by a decreased GroEL binding and/or a marked shift in these kinetically controlled denaturation profiles to higher denaturant concentrations. This particular platform approach can be used to identify small molecules/solution conditions that can stabilize or destabilize thermally stable proteins, multi-domain proteins, oligomeric proteins, and most importantly, aggregation prone metastable proteins. PMID:27505032

Formation and Destruction of Jets in X-ray Binaries

NASA Technical Reports Server (NTRS)

Kylafix, N. D.; Contopoulos, I.; Kazanas, D.; Christodoulou, D. M.

2011-01-01

Context. Neutron-star and black-hole X-ray binaries (XRBs) exhibit radio jets, whose properties depend on the X-ray spectral state e.nd history of the source. In particular, black-hole XRBs emit compact, 8teady radio jets when they are in the so-called hard state. These jets become eruptive as the sources move toward the soft state, disappear in the soft state, and then re-appear when the sources return to the hard state. The jets from neutron-star X-ray binaries are typically weaker radio emitters than the black-hole ones at the same X-ray luminosity and in some cases radio emission is detected in the soft state. Aims. Significant phenomenology has been developed to describe the spectral states of neutron-star and black-hole XRBs, and there is general agreement about the type of the accretion disk around the compact object in the various spectral states. We investigate whether the phenomenology describing the X-ray emission on one hand and the jet appearance and disappearance on the other can be put together in a consistent physical picture. Methods. We consider the so-called Poynting-Robertson cosmic battery (PRCB), which has been shown to explain in a natural way the formation of magnetic fields in the disks of AGNs and the ejection of jets. We investigate whether the PRCB can also explain the [ormation, destruction, and variability or jets in XRBs. Results. We find excellent agreement between the conditions under which the PRCB is efficient (i.e., the type of the accretion disk) and the emission or destruction of the r.adio jet. Conclusions. The disk-jet connection in XRBs can be explained in a natural way using the PRCB.

Analytical modeling of Cosmic Winds and Jets

NASA Astrophysics Data System (ADS)

Vlahakis, Nektarios

1998-11-01

A widespread phenomenon in astrophysics is the outflow of plasma from the environment of stellar or galactic objects. This plasma outflows range from nonuniform winds to highly collimated jets which are common to many stages of stellar evolution. For example, collimated outflows are found around young stars (e.g., as in HH 30), older mass losing stars (as in eta-Carinae), symbiotic stars (e.g. in R Aqr), planetary nebulae nuclei (as in the hourglass nebula), black hole X-ray transients (as in GRS 1915+105 and GRO J1655-40), low- and high-mass X-ray binaries and recently also in cataclysmic variables (e.g. T Pyxidis). Similarly, they are also found emerging from the nuclei of many radio galaxies and quasars. Nevertheless, despite their abundance the questions of the formation, acceleration and propagation of nonuniform winds and jets have not been fully resolved. One of the main difficulties in dealing with the theoretical problem posed by cosmical outflows is that their dynamics needs to be described - even to lowest order - by the highly intractable set of the MHD equations. As is well known, this is a nonlinear system of partial differential equations with several critical points, and only very few classes of solutions are available for axisymmetric systems obtained by assuming a separation of variables in several key functions. This hypothesis allows an analysis in a 2-D geometry of the full MHD equations which reduce then to a system of ordinary differential equations. By a systematic method we construct general classes of exact and self-consistent axisymmetric MHD solutions. The unifying scheme contains three large groups of exact MHD outflow models, (I) meridionally self-similar ones with spherical critical surfaces, (II) radially self-similar models with conical critical surfaces and (III) generalized self-similar models with arbitrary shape critical surfaces. This classification includes known polytropic models, such as the classical Parker description of a stellar wind and the Blandford and Payne (1982) model of a disk-wind; it also contains nonpolytropic models, such as those of winds/jets in Sauty and Tsinganos (1994), Lima et al (1996) and Trussoni et al (1997). Besides the unification of all known cases under a common scheme, several new classes emerge and some are briefly analyzed; they could be explored for a further understanding of the physical properties of MHD outflows from various magnetized astrophysical rotators. We also propose a new class of exact and self-consistent MHD solutions which describe steady and axisymmetric hydromagnetic outflows from the magnetized atmosphere of a rotating gravitating central object with possibly an orbiting accretion disk. The plasma is driven by a thermal pressure gradient, as well as by magnetic rotator and radiative forces. At the Alfvenic and fast critical points the appropriate criticality conditions are applied. The outflows start almost radially but after the Alfven transition and before the fast critical surface is encountered the magnetic pinching force bends the poloidal streamlines into a cylindrical jet-type shape. The terminal speed, Alfven number, cross-sectional area of the jet, as well as its final pressure and density obtain uniform values at large distances from the source. The goal of the study is to give an analytical discussion of the two-dimensional interplay of the thermal pressure gradient, gravitational, Lorentz and inertial forces in accelerating and collimating an MHD flow. A parametric study of the model is given, as well as a brief sketch of its applicability to a self-consistent modeling of collimated outflows from various astrophysical objects. For example, the obtained characteristics of the collimated outflow in agreement with those in jets associated with YSO's. General theoretical arguments and various analytic self-similar solutions have recently shown that magnetized and rotating astrophysical outflows may become asymptotically cylindrical, in agreement with observations of cosmical jets. A notable common feature in all such self-consistent, self-similar MHD solutions is that before final cylindrical collimation is achieved, the jet passes from a stage of oscillations in its radius, Mach number and other physical parameters. It is shown that under rather general assumptions this oscillatory behaviour of collimated outflows is not restricted to the few specific models examined so far, but instead it seems to be a rather general physical property of an MHD outflow which starts noncylindrically before it reaches collimation. It is concluded thence that astrophysical jets are topologically stable to small amplitude, time-independent perturbations in their asymptotically cylindrical shape. Also, similarly to the familiar fluid instabilities these oscillations may give rise to brightness enhancements along jets.

The flow structure of jets from transient sources and implications for modeling short-duration explosive volcanic eruptions

NASA Astrophysics Data System (ADS)

Chojnicki, K. N.; Clarke, A. B.; Adrian, R. J.; Phillips, J. C.

2014-12-01

We used laboratory experiments to examine the rise process in neutrally buoyant jets that resulted from an unsteady supply of momentum, a condition that defines plumes from discrete Vulcanian and Strombolian-style eruptions. We simultaneously measured the analog-jet discharge rate (the supply rate of momentum) and the analog-jet internal velocity distribution (a consequence of momentum transport and dilution). Then, we examined the changes in the analog-jet velocity distribution over time to assess the impact of the supply-rate variations on the momentum-driven rise dynamics. We found that the analog-jet velocity distribution changes significantly and quickly as the supply rate varied, such that the whole-field distribution at any instant differed considerably from the time average. We also found that entrainment varied in space and over time with instantaneous entrainment coefficient values ranging from 0 to 0.93 in an individual unsteady jet. Consequently, we conclude that supply-rate variations exert first-order control over jet dynamics, and therefore cannot be neglected in models without compromising their capability to predict large-scale eruption behavior. These findings emphasize the fundamental differences between unsteady and steady jet dynamics, and show clearly that: (i) variations in source momentum flux directly control the dynamics of the resulting flow; (ii) impulsive flows driven by sources of varying flux cannot reasonably be approximated by quasi-steady flow models. New modeling approaches capable of describing the time-dependent properties of transient volcanic eruption plumes are needed before their trajectory, dilution, and stability can be reliably computed for hazards management.

Jet fuel-induced immunotoxicity.

PubMed

Harris, D T; Sakiestewa, D; Titone, D; Robledo, R F; Young, R S; Witten, M

2000-09-01

Chronic exposure to jet fuel has been shown to cause human liver dysfunction, emotional dysfunction, abnormal electroencephalograms, shortened attention spans, and to decrease sensorimotor speed (3-5). Exposure to potential environmental toxicants such as jet fuel may have significant effects on host systems beyond those readily visible (e.g., physiology, cardiology, respiratory, etc.), e.g., the immune system. Significant changes in immune function, even if short-lived, may have serious consequences for the exposed host that may impinge affect susceptibility to infectious agents. Major alterations in immune function that are long lasting may result in an increased likelihood of development and/or progression of cancer, as well as autoimmune diseases. In the current study mice were exposed 1 h/day for 7 days to a 1000-mg/m3 concentration of aerosolized jet fuel obtained from various sources (JP-8, JP-8+100 and Jet A1) and of differing compositions to simulate occupational exposures. Twenty-four hours after the last exposure the mice were analyzed for effects on the immune system. It was observed that exposure to all jet fuel sources examined had detrimental effects on the immune system. Decreases in viable immune cell numbers and immune organ weights were found. Jet fuel exposure resulted in differential losses of immune cell populations in the thymus. Further, jet fuel exposure resulted in significantly decreased immune function, as analyzed by mitogenesis assays. Suppressed immune function could not be overcome by the addition of exogenous growth factors known to stimulate immune function. Thus, short-term, low-concentration exposure of mice to aerosolized jet fuel, regardless of source or composition, caused significant deleterious effects on the immune system.

The Effects of Surfaces on the Aerodynamics and Acoustics of Jet Flows

NASA Technical Reports Server (NTRS)

Smith, Matthew J.; Miller, Steven A. E.

2013-01-01

Aircraft noise mitigation is an ongoing challenge for the aeronautics research community. In response to this challenge, low-noise aircraft concepts have been developed that exhibit situations where the jet exhaust interacts with an airframe surface. Jet flows interacting with nearby surfaces manifest a complex behavior in which acoustic and aerodynamic characteristics are altered. In this paper, the variation of the aerodynamics, acoustic source, and far-field acoustic intensity are examined as a large at plate is positioned relative to the nozzle exit. Steady Reynolds-Averaged Navier-Stokes solutions are examined to study the aerodynamic changes in the field-variables and turbulence statistics. The mixing noise model of Tam and Auriault is used to predict the noise produced by the jet. To validate both the aerodynamic and the noise prediction models, results are compared with Particle Image Velocimetry (PIV) and free-field acoustic data respectively. The variation of the aerodynamic quantities and noise source are examined by comparing predictions from various jet and at plate configurations with an isolated jet. To quantify the propulsion airframe aeroacoustic installation effects on the aerodynamic noise source, a non-dimensional number is formed that contains the flow-conditions and airframe installation parameters.

Life-cycle analysis of alternative aviation fuels in GREET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elgowainy, A.; Han, J.; Wang, M.

2012-07-23

The Greenhouse gases, Regulated Emissions, and Energy use in Transportation (GREET) model, developed at Argonne National Laboratory, has been expanded to include well-to-wake (WTWa) analysis of aviation fuels and aircraft. This report documents the key WTWa stages and assumptions for fuels that represent alternatives to petroleum jet fuel. The aviation module in GREET consists of three spreadsheets that present detailed characterizations of well-to-pump and pump-to-wake parameters and WTWa results. By using the expanded GREET version (GREET1{_}2011), we estimate WTWa results for energy use (total, fossil, and petroleum energy) and greenhouse gas (GHG) emissions (carbon dioxide, methane, and nitrous oxide) formore » (1) each unit of energy (lower heating value) consumed by the aircraft or (2) each unit of distance traveled/ payload carried by the aircraft. The fuel pathways considered in this analysis include petroleum-based jet fuel from conventional and unconventional sources (i.e., oil sands); Fisher-Tropsch (FT) jet fuel from natural gas, coal, and biomass; bio-jet fuel from fast pyrolysis of cellulosic biomass; and bio-jet fuel from vegetable and algal oils, which falls under the American Society for Testing and Materials category of hydroprocessed esters and fatty acids. For aircraft operation, we considered six passenger aircraft classes and four freight aircraft classes in this analysis. Our analysis revealed that, depending on the feedstock source, the fuel conversion technology, and the allocation or displacement credit methodology applied to co-products, alternative bio-jet fuel pathways have the potential to reduce life-cycle GHG emissions by 55-85 percent compared with conventional (petroleum-based) jet fuel. Although producing FT jet fuel from fossil feedstock sources - such as natural gas and coal - could greatly reduce dependence on crude oil, production from such sources (especially coal) produces greater WTWa GHG emissions compared with petroleum jet fuel production unless carbon management practices, such as carbon capture and storage, are used.« less

Life-Cycle Analysis of Alternative Aviation Fuels in GREET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elgowainy, A.; Han, J.; Wang, M.

2012-06-01

The Greenhouse gases, Regulated Emissions, and Energy use in Transportation (GREET) model, developed at Argonne National Laboratory, has been expanded to include well-to-wake (WTWa) analysis of aviation fuels and aircraft. This report documents the key WTWa stages and assumptions for fuels that represent alternatives to petroleum jet fuel. The aviation module in GREET consists of three spreadsheets that present detailed characterizations of well-to-pump and pump-to-wake parameters and WTWa results. By using the expanded GREET version (GREET1_2011), we estimate WTWa results for energy use (total, fossil, and petroleum energy) and greenhouse gas (GHG) emissions (carbon dioxide, methane, and nitrous oxide) formore » (1) each unit of energy (lower heating value) consumed by the aircraft or(2) each unit of distance traveled/ payload carried by the aircraft. The fuel pathways considered in this analysis include petroleum-based jet fuel from conventional and unconventional sources (i.e., oil sands); Fisher-Tropsch (FT) jet fuel from natural gas, coal, and biomass; bio-jet fuel from fast pyrolysis of cellulosic biomass; and bio-jet fuel from vegetable and algal oils, which falls under the American Society for Testing and Materials category of hydroprocessed esters and fatty acids. For aircraft operation, we considered six passenger aircraft classes and four freight aircraft classes in this analysis. Our analysis revealed that, depending on the feedstock source, the fuel conversion technology, and the allocation or displacement credit methodology applied to co-products, alternative bio-jet fuel pathways have the potential to reduce life-cycle GHG emissions by 55–85 percent compared with conventional (petroleum-based) jet fuel. Although producing FT jet fuel from fossil feedstock sources — such as natural gas and coal — could greatly reduce dependence on crude oil, production from such sources (especially coal) produces greater WTWa GHG emissions compared with petroleum jet fuel production unless carbon management practices, such as carbon capture and storage, are used.« less

MOJAVE: Monitoring of Jets in Active Galactic Nuclei with VLBA Experiments. VIII. Faraday Rotation in Parsec-scale AGN Jets

NASA Astrophysics Data System (ADS)

Hovatta, Talvikki; Lister, Matthew L.; Aller, Margo F.; Aller, Hugh D.; Homan, Daniel C.; Kovalev, Yuri Y.; Pushkarev, Alexander B.; Savolainen, Tuomas

2012-10-01

We report observations of Faraday rotation measures for a sample of 191 extragalactic radio jets observed within the MOJAVE program. Multifrequency Very Long Baseline Array observations were carried out over 12 epochs in 2006 at four frequencies between 8 and 15 GHz. We detect parsec-scale Faraday rotation measures in 149 sources and find the quasars to have larger rotation measures on average than BL Lac objects. The median core rotation measures are significantly higher than in the jet components. This is especially true for quasars where we detect a significant negative correlation between the magnitude of the rotation measure and the de-projected distance from the core. We perform detailed simulations of the observational errors of total intensity, polarization, and Faraday rotation, and concentrate on the errors of transverse Faraday rotation measure gradients in unresolved jets. Our simulations show that the finite image restoring beam size has a significant effect on the observed rotation measure gradients, and spurious gradients can occur due to noise in the data if the jet is less than two beams wide in polarization. We detect significant transverse rotation measure gradients in four sources (0923+392, 1226+023, 2230+114, and 2251+158). In 1226+023 the rotation measure is for the first time seen to change sign from positive to negative over the transverse cuts, which supports the presence of a helical magnetic field in the jet. In this source we also detect variations in the jet rotation measure over a timescale of three months, which are difficult to explain with external Faraday screens and suggest internal Faraday rotation. By comparing fractional polarization changes in jet components between the four frequency bands to depolarization models, we find that an external purely random Faraday screen viewed through only a few lines of sight can explain most of our polarization observations, but in some sources, such as 1226+023 and 2251+158, internal Faraday rotation is needed.

Comparison of Orbiter PRCS Plume Flow Fields Using CFD and Modified Source Flow Codes

NASA Technical Reports Server (NTRS)

Rochelle, Wm. C.; Kinsey, Robin E.; Reid, Ethan A.; Stuart, Phillip C.; Lumpkin, Forrest E.

1997-01-01

The Space Shuttle Orbiter will use Reaction Control System (RCS) jets for docking with the planned International Space Station (ISS). During approach and backout maneuvers, plumes from these jets could cause high pressure, heating, and thermal loads on ISS components. The object of this paper is to present comparisons of RCS plume flow fields used to calculate these ISS environments. Because of the complexities of 3-D plumes with variable scarf-angle and multi-jet combinations, NASA/JSC developed a plume flow-field methodology for all of these Orbiter jets. The RCS Plume Model (RPM), which includes effects of scarfed nozzles and dual jets, was developed as a modified source-flow engineering tool to rapidly generate plume properties and impingement environments on ISS components. This paper presents flow-field properties from four PRCS jets: F3U low scarf-angle single jet, F3F high scarf-angle single jet, DTU zero scarf-angle dual jet, and F1F/F2F high scarf-angle dual jet. The RPM results compared well with plume flow fields using four CFD programs: General Aerodynamic Simulation Program (GASP), Cartesian (CART), Unified Solution Algorithm (USA), and Reacting and Multi-phase Program (RAMP). Good comparisons of predicted pressures are shown with STS 64 Shuttle Plume Impingement Flight Experiment (SPIFEX) data.

Refraction and scattering of sound by a shear layer

NASA Technical Reports Server (NTRS)

Schlinker, R. H.; Amiet, R. K.

1980-01-01

The angle and amplitude changes for acoustic waves refracted by a circular open jet shear layer were determined. The generalized refraction theory was assessed experimentally for on axis and off axis acoustic source locations as source frequency varied from 1 kHz to 10 kHz and free stream Mach number varied from 0.1 to 0.4. Angle and amplitude changes across the shear layer show good agreement with theory. Experiments confirm that the refraction theory is independent of shear layer thickness, acoustic source frequency, and source type. A generalized theory is, thus, available for correcting far field noise data acquired in open jet test facilities. The effect of discrete tone scattering by the open jet turbulent shear layer was also studied. Scattering effects were investigated over the same Mach number range as frequency varied from 5 kHz to 15 kHz. Attenuation of discrete tone amplitude and tone broadening were measured as a function of acoustic source position and radiation angle. Scattering was found to be stronger at angles close to the open jet axis than at 90 deg, and becomes stronger as the acoustic source position shifts downstream. A scattering analysis provided an estimate of the onset of discrete tone scattering.

Radio jet propagation and wide-angle tailed radio sources in merging galaxy cluster environments

NASA Technical Reports Server (NTRS)

Loken, Chris; Roettiger, Kurt; Burns, Jack O.; Norman, Michael

1995-01-01

The intracluster medium (ICM) within merging clusters of galaxies is likely to be in a violent or turbulent dynamical state which may have a significant effect on the evolution of cluster radio sources. We present results from a recent gas + N-body simulation of a cluster merger, suggesting that mergers can result in long-lived, supersonic bulk flows, as well as shocks, within a few hundred kiloparsecs of the core of the dominant cluster. These results have motivated our new two-dimensional and three-dimensional simulations of jet propagation in such environments. The first set of simulations models the ISM/ICM transition as a contact discontinuity with a strong velocity shear. A supersonic (M(sub j) = 6) jet crossing this discontinuity into an ICM with a transverse, supersonic wind bends continuously, becomes 'naked' on the upwind side, and forms a distended cocoon on the downwind side. In the case of a mildly supersonic jet (M(sub j) = 3), however, a shock is driven into the ISM and ISM material is pulled along with the jet into the ICM. Instabilities excited at the ISM/ICM interface result in the jet repeatedly pinching off and reestablishing itself in a series of 'disconnection events.' The second set of simulations deals with a jet encountering a shock in the merging cluster environment. A series of relatively high-resolution two-dimensional calculations is used to confirm earlier analysis predicting that the jet will not disrupt when the jet Mach number is greater than the shock Mach number. A jet which survives the encounter with the shock will decrease in radius and disrupt shortly thereafter as a result of the growth of Kelvin-Helmholtz instabilities. We also find, in disagreement with predictions, that the jet flaring angle decreases with increasing jet density. Finally, a three-dimensional simulation of a jet crossing an oblique shock gives rise to a morphology which resembles a wide-angle tailed radio source with the jet flaring at the shock and disrupting to form a long, turbulent tail which is dragged downstream by the preshock wind.

[A NASA / University Joint Venture in Space Science

NASA Technical Reports Server (NTRS)

Wold, Donald C.

1996-01-01

MILAGRO is a water-Cherenkov detector for observing cosmic gamma rays over a broad energy range of 100 GeV to 100 TeV. MILAGRO will be the first detector that has sensitivity overlapping both air-Cherenkov and air-shower detectors. With this detector scientists in the collaboration will study previously observed celestial sources at their known emission energies, extend these observations into a new energy regime, and search for new sources at unexplored energies. The diffuse gamma-radiation component in our galaxy, which originates from interactions of cosmic rays with interstellar gas and photons, provides important information about the density, distribution, and spectrum of the cosmic rays that pervade the interstellar medium. Events in the Compton Gamma Ray Observatory (GRO) are being observed up to about 30 GeV, differing by slightly more than order of magnitude from the low energy threshold of MILAGRO. By looking in coincidence at sources, correlated observations will greatly extend the astrophysics potential of MILAGRO and NASA's GRO. A survey of cosmic-ray observatories is being prepared for scientists and others to provide a resource and reference which describes high energy cosmic-ray research activities around the world. This summary presents information about each research group, such as names of principal investigators, number of persons in the collaboration, energy range, sensitivity, angular resolution, and surface area of detector. Similarly, a survey of gamma-ray telescopes is being prepared to provide a resource and reference which describes gamma-ray telescopes for investigating galactic diffuse gamma-ray flux currently observed in the GeV energy range, but is expected to extend into the TeV range. Two undergraduate students are compiling information about gamma-ray telescopes and high energy cosmic-ray observatories for these surveys. Funding for this project was provided by the Arkansas Space Grant Consortium. Also enclosed Appendix A, B, C, D and E.

Effect of Free Jet on Refraction and Noise

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Georgiadis, Nicholas J.; Bridges, James E.; Dippold, Vance F., III

2005-01-01

This article investigates the role of a free jet on the sound radiated from a jet. In particular, the role of an infinite wind tunnel, which simulates the forward flight condition, is compared to that of a finite wind tunnel. The second configuration is usually used in experiments, where the microphones are located in a static ambient medium far outside the free jet. To study the effect of the free jet on noise, both propagation and source strength need to be addressed. In this work, the exact Green's function in a locally parallel flow is derived for a simulated flight case. Numerical examples are presented that show a reduction in the magnitude of the Green's function in the aft arc and an increase in the forward arc for the simulated flight condition. The effect of finite wind tunnel on refraction is sensitive to the source location and is most pronounced in the aft arc. A Reynolds-averaged Navier-Stokes solution (RANS) yields the required mean flow and turbulence scales that are used in the jet mixing noise spectrum calculations. In addition to the sound/flow interaction, the separate effect of source strength and elongation of the noise-generating region of the jet in a forward flight is studied. Comparisons are made with experiments for the static and finite tunnel cases. Finally, the standard free-jet shear corrections that convert the finite wind tunnel measurements to an ideal wind tunnel arrangement are evaluated.

An extended source for CN jets in Comet P/Halley

NASA Technical Reports Server (NTRS)

Klavetter, James Jay; A'Hearn, Michael F.

1994-01-01

We examined radial intensity profiles of CN jets in comparison with the diffuse, isotropic component of the CN coma of Comet P/Halley. All images were bias-subtracted, flat-fielded, and continuum-subtracted. We calculated the diffuse profiles by finding the azimuthal mean of the coma least contaminated by jets yielding profiles similar to those of vectorial and Haser models of simple photodissociation. We found the jet profiles by calculating a mean around a Gaussian-fitted center in r-theta space. There is an unmistakable difference between the profiles of the CN jets and the profiles of the diffuse CN. Spatial derivatives of these profiles, corrected for geometrical expansion, show that the diffuse component is consistent with a simple photodissociation process, but the jet component is not. The peak production of the jet profile occurs 6000 km from the nucleus at a heliocentric distance of 1.4 AU. Modeling of both components of the coma indicate results that are consistent with the diffuse CN photochemically produced, but the CN jets need an additional extended source. We found that about one-half of the CN in the coma of Comet P/Halley originated from the jets, the rest from the diffuse component. These features, along with the width of the jet being approximately constant, are consistent with a CHON grain origin for the jets.

Ionization source utilizing a jet disturber in combination with an ion funnel and method of operation

DOEpatents

Smith, Richard D.; Kim, Taeman; Tang, Keqi; Udseth, Harold R.

2003-06-24

A jet disturber used in combination with an ion funnel to focus ions and other charged particles generated at or near atmospheric pressure into a relatively low pressure region, which allows increased conductance of the ions and other charged particles. The jet disturber is positioned within an ion funnel and may be interfaced with a multi-capillary inlet juxtaposed between an ion source and the interior of an instrument maintained at near atmospheric pressure. The invention finds particular advantages when deployed to improve the ion transmission between an electrospray ionization source and the first vacuum stage of a mass spectrometer.

Near-field shock formation in noise propagation from a high-power jet aircraft.

PubMed

Gee, Kent L; Neilsen, Tracianne B; Downing, J Micah; James, Michael M; McKinley, Richard L; McKinley, Robert C; Wall, Alan T

2013-02-01

Noise measurements near the F-35A Joint Strike Fighter at military power are analyzed via spatial maps of overall and band pressure levels and skewness. Relative constancy of the pressure waveform skewness reveals that waveform asymmetry, characteristic of supersonic jets, is a source phenomenon originating farther upstream than the maximum overall level. Conversely, growth of the skewness of the time derivative with distance indicates that acoustic shocks largely form through the course of near-field propagation and are not generated explicitly by a source mechanism. These results potentially counter previous arguments that jet "crackle" is a source phenomenon.

Ultra-High Resolution Observations Of Selected Blazars

NASA Astrophysics Data System (ADS)

Hodgson, Jeffrey A.

2015-01-01

Active Galactic Nuclei are the luminous centres of active galaxies that produce powerful relativistic jets from central super massive black holes (SMBH). When these jets are oriented towards the observer's line-of-sight, they become very bright, very variable and very energetic. These sources are known as blazars and Very Long Baseline Interferometry (VLBI) provides a direct means of observing into the heart of these objects. VLBI performed at 3 mm with the Global mm-VLBI Array (GMVA) and 7 mm VLBI performed with the Very Long Baseline Array (VLBA), allows some of the highest angular resolution images of blazars to be produced. In this thesis, we present the first results of an ongoing monitoring program of blazars known to emit at γ-ray energies. The physical processes that produce these jets and the γ-ray emission are still not well known. The jets are thought to be produced by converting gravitational energy around the black hole into relativistic particles that are accelerated away at near the speed of light. However, the exact mechanisms for this and the role that magnetic fields play is not fully clear. Similarly, γ-rays have been long known to have been emitted from blazars and that their production is often related to the up-scattering of synchrotron radiation from the jet. However, the origin of seed photons for the up-scattering (either from within the jet itself or from an external photon field) and the location of the γ-ray emission regions has remained inconclusive. In this thesis, we aim to describe the likely location of γ-ray emission in jets, the physical structure of blazar jets, the location of the VLBI features relative to the origin of the jet and the nature of the magnetic field, both of the VLBI scale jet and in the region where the jet is produced. We present five sources that have been monitored at 3 mm using the GMVA from 2008 until 2012. These sources have been analysed with near-in-time 7 mm maps from the Very Long Baseline Array (VLBA), γ-ray light curves from the Fermi/LAT space telescope and cm to mm-wave total-intensity light curves. In one source, OJ 287, the source has additionally been analysed with monthly imaging at 7 mm with the VLBA and near-in-time 2 cm VLBI maps. We use these resources to analyse high angular resolution structural and spectral changes and see if they correlate with flaring (both radio and γ-ray) activity and with VLBI component ejections. By spectrally decomposing sources, we can determine the spatially resolved magnetic field structure in the jets at the highest yet performed resolutions and at frequencies that are near or above the turnover frequency for synchrotron self-absorption (SSA). We compute the magnetic field estimates from SSA theory and by assuming equipartition between magnetic fields and relativistic particle energies. All sources analysed exhibit downstream quasi-stationary features which sometimes exhibit higher brightness temperatures and flux density variability than the VLBI "core", which we interpret as being recollimation or oblique shocks. We find that γ-ray flaring, mm-wave radio flaring and changes in opacity from optically thick to optically thin, is in many cases consistent with component ejections past both the VLBI "core" and these quasi-stationary downstream features. We find decreasing apparent brightness temperatures and Doppler factors as a function of increased "core" separation, which is interpreted as consistent with a slowly accelerating jet over the de-projected inner ˜10-20 pc. Assuming equipartition between magnetic energy and relativistic particle energy, the magnetic field strengths within the jets at these scales are, on average, between B ˜ 0.3 - 0.9 G, with the highest strengths found within the VLBI "core". From the observed gradient in magnetic field strengths, we can place the mmwave "core" ˜1-3 pc downstream of the base of the jet. Additionally, we estimate the the magnetic field is Bapex ˜ 3000 - 18000 G at the base of the jet. We computed theoretical estimates based on jet production under magnetically arrested disks (MAD) and find our estimates to be consistent. In the BL Lac source OJ 287, we included monthly 7 mm and near-in-time 2 cm VLBA maps to provide full kinematics and increased spectral coverage. Following a previously reported radical change in inner-jet PA of ˜100° we find unusually discrepant PAs compared with the previous jet direction, that follow very different trajectories. The source exhibits a downstream quasi-stationary feature that at times has higher brightness temperatures than the "core". The source also exhibited a large change in apparent component speeds as compared with previous epochs, which we propose could be due to changes in jet pressure causing changes in the location of downstream recollimation or oblique shocks and hence their line-of-sight viewing angle. The addition of 2 cm VLBA data allows for a comparison of magnetic fields derived from SSA and equipartition. The magnetic field estimates are consistent within 20%, with BSSA ≥ 1.6 G and Bequi ≥ 1.2 G in the "core" and BSSA ≤ 0.4 G and Bequi ≤ 0.3 G in the stationary feature. Gamma-ray emission appears to originate in the "core" and the stationary feature. The decrease in magnetic field strengths places the mmwave "core' downstream of the jet base by ≤6 pc and likely outside of the broad line region (BLR). This, combined with the results in other sources are consistent with γ-rays being produced in the vicinity of the VLBI "core" of in further downstream stationary features, which are likely over a parsec downstream of the central black hole, favouring the scenario of photons being up-scattered within the relativistic jet.

THE RADIO JET ASSOCIATED WITH THE MULTIPLE V380 ORI SYSTEM

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rodríguez, Luis F.; Yam, J. Omar; Carrasco-González, Carlos

The giant Herbig–Haro object 222 extends over ∼6′ in the plane of the sky, with a bow shock morphology. The identification of its exciting source has remained uncertain over the years. A non-thermal radio source located at the core of the shock structure was proposed to be the exciting source. However, Very Large Array studies showed that the radio source has a clear morphology of radio galaxy and a lack of flux variations or proper motions, favoring an extragalactic origin. Recently, an optical–IR study proposed that this giant HH object is driven by the multiple stellar system V380 Ori, locatedmore » about 23′ to the SE of HH 222. The exciting sources of HH systems are usually detected as weak free–free emitters at centimeter wavelengths. Here, we report the detection of an elongated radio source associated with the Herbig Be star or with its close infrared companion in the multiple V380 Ori system. This radio source has the characteristics of a thermal radio jet and is aligned with the direction of the giant outflow defined by HH 222 and its suggested counterpart to the SE, HH 1041. We propose that this radio jet traces the origin of the large scale HH outflow. Assuming that the jet arises from the Herbig Be star, the radio luminosity is a few times smaller than the value expected from the radio–bolometric correlation for radio jets, confirming that this is a more evolved object than those used to establish the correlation.« less

Propulsion Airframe Aeroacoustic Integration Effects for a Hybrid Wing Body Aircraft Configuration

NASA Technical Reports Server (NTRS)

Czech, Michael J.; Thomas, Russell H.; Elkoby, Ronen

2010-01-01

An extensive experimental investigation was performed to study the propulsion airframe aeroacoustic effects of a high bypass ratio engine for a hybrid wing body aircraft configuration where the engine is installed above the wing. The objective was to provide an understanding of the jet noise shielding effectiveness as a function of engine gas condition and location as well as nozzle configuration. A 4.7% scale nozzle of a bypass ratio seven engine was run at characteristic cycle points under static and forward flight conditions. The effect of the pylon and its orientation on jet noise was also studied as a function of bypass ratio and cycle condition. The addition of a pylon yielded significant spectral changes lowering jet noise by up to 4dB at high polar angles and increasing it by 2 to 3dB at forward angles. In order to assess jet noise shielding, a planform representation of the airframe model, also at 4.7% scale was traversed relative to the jet nozzle from downstream to several diameters upstream of the wing trailing edge. Installations at two fan diameters upstream of the wing trailing edge provided only limited shielding in the forward arc at high frequencies for both the axisymmetric and a conventional round nozzle with pylon. This was consistent with phased array measurements suggesting that the high frequency sources are predominantly located near the nozzle exit and, consequently, are amenable to shielding. The mid to low frequencies sources were observed further downstream and shielding was insignificant. Chevrons were designed and used to impact the distribution of sources with the more aggressive design showing a significant upstream migration of the sources in the mid frequency range. Furthermore, the chevrons reduced the low frequency source levels and the typical high frequency increase due to the application of chevron nozzles was successfully shielded. The pylon was further modified with a technology that injects air through the shelf of the pylon which was effective in reducing low frequency noise and moving jet noise sources closer to the nozzle exit. In general, shielding effectiveness varied as a function of cycle condition with the cutback condition producing higher shielding compared to sideline power. The configuration with a more strongly immersed chevron and a pylon oriented opposite to the microphones produced the largest reduction in jet noise. In addition to the jet noise source, the shielding of a broadband point noise source was documented with up to 20 dB of noise reduction at directivity angles directly under the shielding surface.

Propulsion Airframe Aeroacoustic Integration Effects for a Hybrid Wing Body Aircraft Configuration

NASA Technical Reports Server (NTRS)

Czech, Michael J.; Thomas, Russell H; Elkoby, Ronen

2012-01-01

An extensive experimental investigation was performed to study the propulsion airframe aeroacoustic effects of a high bypass ratio engine for a hybrid wing body aircraft configuration where the engine is installed above the wing. The objective was to provide an understanding of the jet noise shielding effectiveness as a function of engine gas condition and location as well as nozzle configuration. A 4.7% scale nozzle of a bypass ratio seven engine was run at characteristic cycle points under static and forward flight conditions. The effect of the pylon and its orientation on jet noise was also studied as a function of bypass ratio and cycle condition. The addition of a pylon yielded significant spectral changes lowering jet noise by up to 4 dB at high polar angles and increasing it by 2 to 3 dB at forward angles. In order to assess jet noise shielding, a planform representation of the airframe model, also at 4.7% scale was traversed such that the jet nozzle was positioned from downstream of to several diameters upstream of the airframe model trailing edge. Installations at two fan diameters upstream of the wing trailing edge provided only limited shielding in the forward arc at high frequencies for both the axisymmetric and a conventional round nozzle with pylon. This was consistent with phased array measurements suggesting that the high frequency sources are predominantly located near the nozzle exit and, consequently, are amenable to shielding. The mid to low frequency sources were observed further downstream and shielding was insignificant. Chevrons were designed and used to impact the distribution of sources with the more aggressive design showing a significant upstream migration of the sources in the mid frequency range. Furthermore, the chevrons reduced the low frequency source levels and the typical high frequency increase due to the application of chevron nozzles was successfully shielded. The pylon was further modified with a technology that injects air through the shelf of the pylon which was effective in reducing low frequency noise and moving jet noise sources closer to the nozzle exit. In general, shielding effectiveness varied as a function of cycle condition with the cutback condition producing higher shielding compared to sideline power. The configuration with a more strongly immersed chevron and a pylon oriented opposite to the microphones produced the largest reduction in jet noise. In addition to the jet noise source, the shielding of a broadband point noise source was documented with up to 20 dB of noise reduction at directivity angles directly under the shielding surface.

Modeling of the Enceladus water vapor jets for interpreting UVIS star and solar occultation observations

NASA Astrophysics Data System (ADS)

Portyankina, Ganna; Esposito, Larry W.; Aye, Klaus-Michael; Hansen, Candice J.

2015-11-01

One of the most spectacular discoveries of the Cassini mission is jets emitting from the southern pole of Saturn’s moon Enceladus. The composition of the jets is water vapor and salty ice grains with traces of organic compounds. Jets, merging into a wide plume at a distance, are observed by multiple instruments on Cassini. Recent observations of the visible dust plume by the Cassini Imaging Science Subsystem (ISS) identified as many as 98 jet sources located along “tiger stripes” [Porco et al. 2014]. There is a recent controversy on the question if some of these jets are “optical illusion” caused by geometrical overlap of continuous source eruptions along the “tiger stripes” in the field of view of ISS [Spitale et al. 2015]. The Cassini’s Ultraviolet Imaging Spectrograph (UVIS) observed occultations of several stars and the Sun by the water vapor plume of Enceladus. During the solar occultation separate collimated gas jets were detected inside the background plume [Hansen et al., 2006 and 2011]. These observations directly provide data about water vapor column densities along the line of sight of the UVIS instrument and could help distinguish between the presence of only localized or also continuous sources. We use Monte Carlo simulations and Direct Simulation Monte Carlo (DSMC) to model the plume of Enceladus with multiple (or continuous) jet sources. The models account for molecular collisions, gravitational and Coriolis forces. The models result in the 3-D distribution of water vapor density and surface deposition patterns. Comparison between the simulation results and column densities derived from UVIS observations provide constraints on the physical characteristics of the plume and jets. The specific geometry of the UVIS observations helps to estimate the production rates and velocity distribution of the water molecules emitted by the individual jets.Hansen, C. J. et al., Science 311:1422-1425 (2006); Hansen, C. J. et al, GRL 38:L11202 (2011); Porco, C.C. et al. Astron. J. 148, 45 (2014); Spitale, J.N. et al. Nature 521, 57-60 (2015)

Successive Two-sided Loop Jets Caused by Magnetic Reconnection between Two Adjacent Filamentary Threads

NASA Astrophysics Data System (ADS)

Tian, Zhanjun; Liu, Yu; Shen, Yuandeng; Elmhamdi, Abouazza; Su, Jiangtao; Liu, Ying D.; Kordi, Ayman. S.

2017-08-01

We present observational analysis of two successive two-sided loop jets observed by the ground-based New Vacuum Solar Telescope and the space-borne Solar Dynamics Observatory. The two successive two-sided loop jets manifested similar evolution processes and both were associated with the interaction of two small-scale adjacent filamentary threads, magnetic emerging, and cancellation processes at the jet’s source region. High temporal and high spatial resolution observations reveal that the two adjacent ends of the two filamentary threads are rooted in opposite magnetic polarities within the source region. The two threads approached each other, and then an obvious brightening patch is observed at the interaction position. Subsequently, a pair of hot plasma ejections are observed heading in opposite directions along the paths of the two filamentary threads at a typical speed for two-sided loop jets of the order 150 km s-1. Close to the end of the second jet, we report the formation of a bright hot loop structure at the source region, which suggests the formation of new loops during the interaction. Based on the observational results, we propose that the observed two-sided loop jets are caused by magnetic reconnection between the two adjacent filamentary threads, largely different from the previous scenario that a two-sided loop jet is generated by magnetic reconnection between an emerging bipole and the overlying horizontal magnetic fields.

Group II chaperonins: new TRiC(k)s and turns of a protein folding machine.

PubMed

Gutsche, I; Essen, L O; Baumeister, W

1999-10-22

In the past decade, the eubacterial group I chaperonin GroEL became the paradigm of a protein folding machine. More recently, electron microscopy and X-ray crystallography offered insights into the structure of the thermosome, the archetype of the group II chaperonins which also comprise the chaperonin from the eukaryotic cytosol TRiC. Some structural differences from GroEL were revealed, namely the existence of a built-in lid provided by the helical protrusions of the apical domains instead of a GroES-like co-chaperonin. These structural studies provide a framework for understanding the differences in the mode of action between the group II and the group I chaperonins. In vitro analyses of the folding of non-native substrates coupled to ATP binding and hydrolysis are progressing towards establishing a functional cycle for group II chaperonins. A protein complex called GimC/prefoldin has recently been found to cooperate with TRiC in vivo, and its characterization is under way. Copyright 1999 Academic Press.

Performance evaluation of Pichia kluyveri, Kluyveromyces marxianus and Saccharomyces cerevisiae in industrial tequila fermentation.

PubMed

Amaya-Delgado, L; Herrera-López, E J; Arrizon, Javier; Arellano-Plaza, M; Gschaedler, A

2013-05-01

Traditionally, industrial tequila production has used spontaneous fermentation or Saccharomyces cerevisiae yeast strains. Despite the potential of non-Saccharomyces strains for alcoholic fermentation, few studies have been performed at industrial level with these yeasts. Therefore, in this work, Agave tequilana juice was fermented at an industrial level using two non-Saccharomyces yeasts (Pichia kluyveri and Kluyveromyces marxianus) with fermentation efficiency higher than 85 %. Pichia kluyveri (GRO3) was more efficient for alcohol and ethyl lactate production than S. cerevisiae (AR5), while Kluyveromyces marxianus (GRO6) produced more isobutanol and ethyl-acetate than S. cerevisiae (AR5). The level of volatile compounds at the end of fermentation was compared with the tequila standard regulation. All volatile compounds were within the allowed range except for methanol, which was higher for S. cerevisiae (AR5) and K. marxianus (GRO6). The variations in methanol may have been caused by the Agave tequilana used for the tests, since this compound is not synthesized by these yeasts.

An analysis of region-of-influence methods for flood regionalization in the Gulf-Atlantic Rolling Plains

USGS Publications Warehouse

Eng, K.; Tasker, Gary D.; Milly, P.C.D.

2005-01-01

Region-of-influence (RoI) approaches for estimating streamflow characteristics at ungaged sites were applied and evaluated in a case study of the 50-year peak discharge in the Gulf-Atlantic Rolling Plains of the southeastern United States. Linear regression against basin characteristics was performed for each ungaged site considered based on data from a region of influence containing the n closest gages in predictor variable (PRoI) or geographic (GRoI) space. Augmentation of this count based cutoff by a distance based cutoff also was considered. Prediction errors were evaluated for an independent (split-sampled) dataset. For the dataset and metrics considered here: (1) for either PRoI or GRoI, optimal results were found when the simpler count based cutoff, rather than the distance augmented cutoff, was used; (2) GRoI produced lower error than PRoI when applied indiscriminately over the entire study region; (3) PRoI performance improved considerably when RoI was restricted to predefined geographic subregions.

Dynamic interaction of a downward plane jet and a cough jet with respect to particle transmission: An analytical and experimental study.

PubMed

Cao, Guangyu; Liu, Shichao; Boor, Brandon E; Novoselac, Atila

2017-08-01

A cough jet can travel beyond the breathing zone of the source person, and thus, infectious viral- and bacterial-laden particles can be transported from the source person to others in close proximity. To reduce the interpersonal transmission of coughed particles, the objective of this study was to analytically and experimentally investigate the performance of downward plane jets with various discharge velocities. Chamber measurements were conducted to examine the interaction between a transient cough jet (discharge velocities of 12 m/sec and 16 m/sec) and a steady downward plane jet (discharge velocities from 1.0-8.5 m/sec) with respect to the transport of and human exposure to coughed particles. The results show that a relatively high-speed cough can easily penetrate a downward plane jet with a discharge velocity of less than 6 m/sec. A downward plane jet with a discharge velocity of 8.5 m/sec can bend the cough jet to a certain extent. In this study, momentum comparison of the cough jet and the downward plane jet shows that the value of personal exposure to coughed particles depends on the ratio of jet momentums. The results show that when the two momentums are equivalent or if the downward plane jet has a greater momentum, the cough jet is deflected downward and does not reach the breathing zone of the target thermal dummy. Using the ratio of the two momentums, it may be estimated whether the transmission of a cough jet can be controlled. A trajectory model was developed based on the ratio of the two momentums of a cough jet and a downward jet and was validated using the experimental data. In addition, the predicted trajectory of the cough jet agreed well with the results from smoke visualization experiments. This model can be used to guide the design of downward plane jet systems for protection of occupants from coughed particles.

X-ray Properties and the Environment of Compact Radio Sources.

NASA Astrophysics Data System (ADS)

Siemiginowska, Aneta; Sobolewska, Malgorzata; Guainazzi, Matteo; Hardcastle, Martin; Migliori, Giulia; Ostorero, Luisa; Stawarz, Lukasz

2018-01-01

Compact extragalactic radio sources provide important insights into the initial stages of radio source evolution and probe states of a black hole activity at the time of the formation of the relativistic outflow. Such outflows propagate out to hundreds kpc distances from the origin and impact environment on many scales, and thus influence evolution of structures in the universe. These compact sources show radio features typically observed in large-scale radio galaxies (jets, lobes, hot spots), but contained within the central 1 kpc region of the host galaxy. Compact Symmetric Objects (CSOs, a subclass of GigaHertz Peaked spectrum radio sources) are symmetric and not affected by beaming. Their linear radio size can be translated into a source age if one measures the expansion velocity of the radio structures. Such ages has been measured for a small sample of CSOs. Using the Chandra X-ray Observatory and XMM-Newton we observed a pilot samples of 16 CSOs in X-rays (6 for the first time). Our results show heterogeneous nature of the CSOs X-ray emission indicating a range of AGN luminosities and a complex environment. In particular, we identified four Compton Thick sources with a dense medium (equivalent column > 1e24 cm^-2) capable of disturbing/slowing down the jet and confining the jet to a small region. Thus for the first time we gain the observational evidence in X-ray domain in favor of the hypothesis that in a sub-population of CSOs the radio jets may be confined by the dense X-ray obscuring medium. As a consequence, the kinematic ages of these CSOs may be underestimated.. We discuss the implications of our results on the emission models of CSOs, the earliest stages of the radio source evolution, jet interactions with the ISM, diversity of the environments in which the jets expand, and jet-galaxy co-evolution.Partial support for this work was provided by the NASA grants GO1-12145X, GO4-15099X, NNX10AO60G, NNX17AC23G and XMM AO15 project 78461. This work supported in part by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.

Serum cytokine/chemokine profiles in patients with dengue fever (DF) and dengue hemorrhagic fever (FHD) by using protein array.

PubMed

Oliveira, Renato Antonio Dos Santos; Cordeiro, Marli Tenório; Moura, Patrícia Muniz Mendes Freire de; Baptista Filho, Paulo Neves Bapti; Braga-Neto, Ulisses de Mendonça; Marques, Ernesto Torres de Azevedo; Gil, Laura Helena Vega Gonzales

2017-04-01

DENV infection can induce different clinical manifestations varying from mild forms to dengue fever (DF) or the severe hemorrhagic fever (DHF). Several factors are involved in the progression from DF to DHF. No marker is available to predict this progression. Such biomarker could allow a suitable medical care at the beginning of the infection, improving patient prognosis. The aim of this study was to compare the serum expression levels of acute phase proteins in a well-established cohort of dengue fever (DF) and dengue hemorrhagic fever (DHF) patients, in order to individuate a prognostic marker of diseases severity. The serum levels of 36 cytokines, chemokines and acute phase proteins were determined in DF and DHF patients and compared to healthy volunteers using a multiplex protein array and near-infrared (NIR) fluorescence detection. Serum levels of IL-1ra, IL-23, MIF, sCD40 ligand, IP-10 and GRO-α were also determined by ELISA. At the early stages of infection, GRO-α and IP-10 expression levels were different in DF compared to DHF patients. Besides, GRO-α was positively correlated with platelet counts and IP-10 was negatively correlated with total protein levels. These findings suggest that high levels of GRO-α during acute DENV infection may be associated with a good prognosis, while high levels of IP-10 may be a warning sign of infection severity. Copyright © 2017 Elsevier B.V. All rights reserved.

30 CFR 14.21 - Laboratory-scale flame test apparatus.

Code of Federal Regulations, 2012 CFR

2012-07-01

... other and the flame from each jet impinges upon each other in pairs. The burner fuel must be at least 98... test chamber. (c) A U-shaped gas-fueled impinged jet burner ignition source, measuring 12 inches (30.5 cm) long and 4 inches (10.2 cm) wide, with two parallel rows of 6 jets each. Each jet is spaced...

30 CFR 14.21 - Laboratory-scale flame test apparatus.

Code of Federal Regulations, 2013 CFR

2013-07-01

... other and the flame from each jet impinges upon each other in pairs. The burner fuel must be at least 98... test chamber. (c) A U-shaped gas-fueled impinged jet burner ignition source, measuring 12 inches (30.5 cm) long and 4 inches (10.2 cm) wide, with two parallel rows of 6 jets each. Each jet is spaced...

30 CFR 14.21 - Laboratory-scale flame test apparatus.

Code of Federal Regulations, 2014 CFR

2014-07-01

... other and the flame from each jet impinges upon each other in pairs. The burner fuel must be at least 98... test chamber. (c) A U-shaped gas-fueled impinged jet burner ignition source, measuring 12 inches (30.5 cm) long and 4 inches (10.2 cm) wide, with two parallel rows of 6 jets each. Each jet is spaced...

The Scale Invariant Synchrotron Jet of Flat Spectrum Radio Quasars

NASA Astrophysics Data System (ADS)

Du, L. M.; Bai, J. M.; Xie, Z. H.; Yi, T. F.; Xu, Y. B.; Xue, R.; Wang, X. H.

2015-06-01

In this paper, the scale invariance of the synchrotron jet of Flat Spectrum Radio Quasars has been studied using a sample of combined sources from FKM04 and from SDSS DR3 catalogue. Since the research of scale invariance has been focused on sub-Eddington cases that can be fitted onto the fundamental plane, while near-Eddington sources such as FSRQs have not been explicitly studied. The extracted physical properties of synchrotron jet of FSRQs have been shown to be scale invariant using our sample. The results are in good agreement with theoretical expectations of Heinz & Sunyaev (2003). Therefore, the jet synchrotron is shown to be scale independent, regardless of the accretion modes. Results in this article thus lend support to the scale invariant model of the jet synchrotron throughout the mass scale of black hole systems.

Radiative Processes in Jets

NASA Astrophysics Data System (ADS)

Vila, Gabriela S.

Relativistic jets and collimated outflows are ubiquitous phenomena in astrophysical settings, from young stellar objects up to Active Galactic Nuclei. The observed emission from some of these jets can cover the whole electromagnetic spectrum, from radio to gamma-rays. The relevant features of the spectral energy distributions depend on the nature of the source and on the characteristics of the surrounding environment. Here the author reviews the main physical processes that command the interactions between populations of relativistic particles locally accelerated in the jets, with matter, radiation and magnetic fields. Special attention is given to the conditions that lead to the dominance of the different radiative mechanisms. Examples from various types of sources are used to illustrate these effects.

Evidence for Alfvén Waves in Source Flares of Impulsive Solar Energetic Particle Events

NASA Astrophysics Data System (ADS)

Bucik, R.; Innes, D.; Mason, G. M.; Wiedenbeck, M. E.; Gomez-Herrero, R.; Nitta, N.

2017-12-01

Impulsive solar energetic particle events, characterised by a peculiar elemental composition with the rare elements like 3He and ultra-heavy ions enhanced by factors up to ten thousand above their thermal abundance, have been puzzling for almost 50 years. The solar sources of these events have been commonly associated with coronal jets, believed to be a signature of magnetic reconnection involving field lines open to interplanetary space. Here we present some of the most intense events, highly enriched in both 3He and heavier ions. The corresponding high-resolution, extreme-ultraviolet imaging observations have revealed for the first time a helical structure in the source flare with a jet-like shape. A mini-filament at the base of the jet appears to trigger these events. The events were observed with the two Solar Terrestrial Relations Observatories on the backside of the Sun, during the period of increased solar activity in 2014. During the last decade, it has been established that the helical motions in coronal jets represent propagating Alfvén waves. Revealing such magnetic-untwisting waves in the solar sources of highly enriched events in this study is consistent with a stochastic acceleration mechanism. An examination of jets in previously reported impulsive solar energetic particle events indicates that they tend to be large-scale blowout jets, sometimes cleanly showing a twisted configuration.The work of R. Bucik is supported by the Deutsche Forschungsgemeinschaft grant BU 3115/2-1.

On the role of the radiation directivity in noise reduction for STOL aircraft.

NASA Technical Reports Server (NTRS)

Gruschka, H. D.

1972-01-01

The radiation characteristics of distributed randomly fluctuating acoustic sources when shielded by finite surfaces are discussed briefly. A number of model tests using loudspeakers as artificial noise sources with a given broadband power density spectrum are used to demonstrate the effectiveness of reducing the radiated noise intensity in certain directions due to shielding. In the lateral direction of the source array noise reductions of 12 dB are observed with relatively small shields. The same shields reduce the backward radiation by approximately 20 dB. With the results obtained in these acoustic model tests the potentials of jet noise reduction of jet flap propulsion systems applicable in future STOL aircraft are discussed. The jet flap configuration as a complex aerodynamic noise source is described briefly.

Chandra enables study of x-ray jets

PubMed Central

Schwartz, Daniel

2010-01-01

The exquisite angular resolution of the Chandra x-ray telescope has enabled the detection and study of resolved x-ray jets in a wide variety of astronomical systems. Chandra has detected extended jets in our galaxy from protostars, symbiotic binaries, neutron star pulsars, black hole binaries, extragalactic jets in radio sources, and quasars. The x-ray data play an essential role in deducing the emission mechanism of the jets, in revealing the interaction of jets with the intergalactic or intracluster media, and in studying the energy generation budget of black holes. PMID:20378839

FAR-TECH's Nanoparticle Plasma Jet System and its Application to Disruptions, Deep Fueling, and Diagnostics

NASA Astrophysics Data System (ADS)

Thompson, J. R.; Bogatu, I. N.; Galkin, S. A.; Kim, J. S.

2012-10-01

Hyper-velocity plasma jets have potential applications in tokamaks for disruption mitigation, deep fueling and diagnostics. Pulsed power based solid-state sources and plasma accelerators offer advantages of rapid response and mass delivery at high velocities. Fast response is critical for some disruption mitigation scenario needs, while high velocity is especially important for penetration into tokamak plasma and its confining magnetic field, as in the case of deep fueling. FAR-TECH is developing the capability of producing large-mass hyper-velocity plasma jets. The prototype solid-state source has produced: 1) >8.4 mg of H2 gas only, and 2) >25 mg of H2 and >180 mg of C60 in a H2/C60 gas mixture. Using a coaxial plasma gun coupled to the source, we have successfully demonstrated the acceleration of composite H/C60 plasma jets, with momentum as high as 0.6 g.km/s, and containing an estimated C60 mass of ˜75 mg. We present the status of FAR-TECH's nanoparticle plasma jet system and discuss its application to disruptions, deep fueling, and diagnostics. A new TiH2/C60 solid-state source capable of generating significantly higher quantities of H2 and C60 in <0.5 ms will be discussed.

Modeling of Turbulence Generated Noise in Jets

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Bridges, James

2004-01-01

A numerically calculated Green's function is used to predict jet noise spectrum and its far-field directivity. A linearized form of Lilley's equation governs the non-causal Green s function of interest, with the non-linear terms on the right hand side identified as the source. In this paper, contributions from the so-called self- and shear-noise source terms will be discussed. A Reynolds-averaged Navier-Stokes solution yields the required mean flow as well as time- and length scales of a noise-generating turbulent eddy. A non-compact source, with exponential temporal and spatial functions, is used to describe the turbulence velocity correlation tensors. It is shown that while an exact non-causal Green's function accurately predicts the observed shift in the location of the spectrum peak with angle as well as the angularity of sound at moderate Mach numbers, at high subsonic and supersonic acoustic Mach numbers the polar directivity of radiated sound is not entirely captured by this Green's function. Results presented for Mach 0.5 and 0.9 isothermal jets, as well as a Mach 0.8 hot jet conclude that near the peak radiation angle a different source/Green's function convolution integral may be required in order to capture the peak observed directivity of jet noise.

Jet Noise Shielding Provided by a Hybrid Wing Body Aircraft

NASA Technical Reports Server (NTRS)

Doty, Michael J.; Brooks, Thomas F.; Burley, Casey L.; Bahr, Christopher J.; Pope, Dennis S.

2014-01-01

One approach toward achieving NASA's aggressive N+2 noise goal of 42 EPNdB cumulative margin below Stage 4 is through the use of novel vehicle configurations like the Hybrid Wing Body (HWB). Jet noise measurements from an HWB acoustic test in NASA Langley's 14- by 22-Foot Subsonic Tunnel are described. Two dual-stream, heated Compact Jet Engine Simulator (CJES) units are mounted underneath the inverted HWB model on a traversable support to permit measurement of varying levels of shielding provided by the fuselage. Both an axisymmetric and low noise chevron nozzle set are investigated in the context of shielding. The unshielded chevron nozzle set shows 1 to 2 dB of source noise reduction (relative to the unshielded axisymmetric nozzle set) with some penalties at higher frequencies. Shielding of the axisymmetric nozzles shows up to 6.5 dB of reduction at high frequency. The combination of shielding and low noise chevrons shows benefits beyond the expected additive benefits of the two, up to 10 dB, due to the effective migration of the jet source peak noise location upstream for increased shielding effectiveness. Jet noise source maps from phased array results processed with the Deconvolution Approach for the Mapping of Acoustic Sources (DAMAS) algorithm reinforce these observations.

Ultra-High Bypass Ratio Jet Noise

NASA Technical Reports Server (NTRS)

Low, John K. C.

1994-01-01

The jet noise from a 1/15 scale model of a Pratt and Whitney Advanced Ducted Propulsor (ADP) was measured in the United Technology Research Center anechoic research tunnel (ART) under a range of operating conditions. Conditions were chosen to match engine operating conditions. Data were obtained at static conditions and at wind tunnel Mach numbers of 0.2, 0.27, and 0.35 to simulate inflight effects on jet noise. Due to a temperature dependence of the secondary nozzle area, the model nozzle secondary to primary area ratio varied from 7.12 at 100 percent thrust to 7.39 at 30 percent thrust. The bypass ratio varied from 10.2 to 11.8 respectively. Comparison of the data with predictions using the current Society of Automotive Engineers (SAE) Jet Noise Prediction Method showed that the current prediction method overpredicted the ADP jet noise by 6 decibels. The data suggest that a simple method of subtracting 6 decibels from the SAE Coaxial Jet Noise Prediction for the merged and secondary flow source components would result in good agreement between predicted and measured levels. The simulated jet noise flight effects with wind tunnel Mach numbers up to 0.35 produced jet noise inflight noise reductions up to 12 decibels. The reductions in jet noise levels were across the entire jet noise spectra, suggesting that the inflight effects affected all source noise components.

EVIDENCE FOR SIMULTANEOUS JETS AND DISK WINDS IN LUMINOUS LOW-MASS X-RAY BINARIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Homan, Jeroen; Neilsen, Joseph; Allen, Jessamyn L.

Recent work on jets and disk winds in low-mass X-ray binaries (LMXBs) suggests that they are to a large extent mutually exclusive, with jets observed in spectrally hard states and disk winds observed in spectrally soft states. In this paper we use existing literature on jets and disk winds in the luminous neutron star (NS) LMXB GX 13+1, in combination with archival Rossi X-ray Timing Explorer data, to show that this source is likely able to produce jets and disk winds simultaneously. We find that jets and disk winds occur in the same location on the source’s track in itsmore » X-ray color–color diagram. A further study of literature on other luminous LMXBs reveals that this behavior is more common, with indications for simultaneous jets and disk winds in the black hole LMXBs V404 Cyg and GRS 1915+105 and the NS LMXBs Sco X-1 and Cir X-1. For the three sources for which we have the necessary spectral information, we find that simultaneous jets/winds all occur in their spectrally hardest states. Our findings indicate that in LMXBs with luminosities above a few tens of percent of the Eddington luminosity, jets and disk winds are not mutually exclusive, and the presence of disk winds does not necessarily result in jet suppression.« less

Morphology and Dynamics of Jets of Comet 67P Churyumov-Gerasimenko: Early Phase Development

NASA Astrophysics Data System (ADS)

Lin, Zhong-Yi; Ip, Wing-Huen; Lai, Ian-Lin; Lee, Jui-Chi; Pajola, Maurizio; Lara, Luisa; Gutierrez, Pedro; Rodrigo, Rafael; Bodewits, Dennis; A'Hearn, Mike; Vincent, Jean-Baptiste; Agarwal, Jessica; Keller, Uwe; Mottola, Stefano; Bertini, Ivano; Lowry, Stephen; Rozek, Agata; Liao, Ying; Rosetta Osiris Coi Team

2015-04-01

The scientific camera, OSIRIS (Optical, Spectroscopic, and Infrared Remote Imaging System), onboard the Rosetta spacecraft comprises a Narrow Angle Camera (NAC) for nucleus surface and dust studies and a Wide Angle Camera (WAC) for the wide field of dust and gas coma investigations. The dynamical behavior of jets in the dust coma continuously monitored by using dust filters from the arrival at the comet (August 2014) throughout the mapping phase (Oct. 2014) is described here. The analysis will cover the study of the time variability of jets, the source regions of these jets, the excess brightness of jets relative to the averaged coma brightness, and the brightness distribution of dust jets along the projected distance. The jets detected between August and September originated mostly from the neck region (Hapi). Morphological changes appeared over a time scale of several days in September. The brightness slope of the dust jets is much steeper than the background coma. This might be related to the sublimation or fragmentation of the emitted dust grains. Inter-comparison with results from other experiments will be necessary to understand the difference between the dust emitted from Hapi and those from the head and the body of the nucleus surface. The physical properties of the Hapi jets will be compared to dust jets (and their source regions) to emerge as comet 67P moves around the perihelion.

Measurement of Correlation Between Flow Density, Velocity, and Density*velocity(sup 2) with Far Field Noise in High Speed Jets

NASA Technical Reports Server (NTRS)

Panda, Jayanta; Seasholtz, Richard G.; Elam, Kristie A.

2002-01-01

To locate noise sources in high-speed jets, the sound pressure fluctuations p', measured at far field locations, were correlated with each of radial velocity v, density rho, and phov(exp 2) fluctuations measured from various points in jet plumes. The experiments follow the cause-and-effect method of sound source identification, where correlation is related to the first, and correlation to the second source terms of Lighthill's equation. Three fully expanded, unheated plumes of Mach number 0.95, 1.4 and 1.8 were studied for this purpose. The velocity and density fluctuations were measured simultaneously using a recently developed, non-intrusive, point measurement technique based on molecular Rayleigh scattering. It was observed that along the jet centerline the density fluctuation spectra S(sub rho) have different shapes than the radial velocity spectra S(sub v), while data obtained from the peripheral shear layer show similarity between the two spectra. Density fluctuations in the jet showed significantly higher correlation, than either rhov(sub 2) or v fluctuations. It is found that a single point correlation from the peak sound emitting region at the end of the potential core can account for nearly 10% of all noise at 30 to the jet axis. The correlation, representing the effectiveness of a longitudinal quadrupole in generating noise 90 to the jet axis, is found to be zero within experimental uncertainty. In contrast rhov(exp 2) fluctuations were better correlated with sound pressure fluctuation at the 30 location. The strongest source of sound is found to lie at the centerline and beyond the end of potential core.

Acoustic loads prediction on jet aircraft

NASA Technical Reports Server (NTRS)

Reddy, N. N.

1992-01-01

A nearfield aircraft noise prediction computer program is presented for the F-22 aircraft. The dominant sources of noise are jet turbulent mixing noise, jet broadband shock noise, and fluctuating pressure under the turbulent boundary layer. All results from this investigation are presented in viewgraph format.

Acoustic loads prediction on jet aircraft

NASA Astrophysics Data System (ADS)

Reddy, N. N.

1992-07-01

A nearfield aircraft noise prediction computer program is presented for the F-22 aircraft. The dominant sources of noise are jet turbulent mixing noise, jet broadband shock noise, and fluctuating pressure under the turbulent boundary layer. All results from this investigation are presented in viewgraph format.

Characterization of gas targets for laser produced extreme ultraviolet plasmas with a Hartmann-Shack sensor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peth, Christian; Kranzusch, Sebastian; Mann, Klaus

2004-10-01

A table top extreme ultraviolet (EUV)-source was developed at Laser-Laboratorium Goettingen for the characterization of optical components and sensoric devices in the wavelength region from 11 to 13 nm. EUV radiation is generated by focusing the beam of a Q-switched Nd:YAG laser into a pulsed xenon gas jet. Since a directed gas jet with a high number density is needed for an optimal performance of the source, conical nozzles with different cone angles were drilled with an excimer laser to produce a supersonic gas jet. The influence of the nozzle geometry on the gas jet was characterized with a Hartmann-Shackmore » wave front sensor. The deformation of a planar wave front after passing the gas jet was analyzed with this sensor, allowing a reconstruction of the gas density distribution. Thus, the gas jet was optimized resulting in an increase of EUV emission by a factor of two and a decrease of the plasma size at the same time.« less

Evaporation system and method for gas jet deposition of thin film materials

DOEpatents

Schmitt, J.J.; Halpern, B.L.

1994-10-18

A method and apparatus are disclosed for depositing thin films of materials such as metals, oxides and nitrides at low temperature relies on a supersonic free jet of inert carrier gas to transport vapor species generated from an evaporation source to the surface of a substrate. Film deposition vapors are generated from solid film precursor materials, including those in the form of wires or powders. The vapor from these sources is carried downstream in a low pressure supersonic jet of inert gas to the surface of a substrate where the vapors deposit to form a thin film. A reactant gas can be introduced into the gas jet to form a reaction product with the evaporated material. The substrate can be moved from the gas jet past a gas jet containing a reactant gas in which a discharge has been generated, the speed of movement being sufficient to form a thin film which is chemically composed of the evaporated material and reactant gases. 8 figs.

Evaporation system and method for gas jet deposition of thin film materials

DOEpatents

Schmitt, Jerome J.; Halpern, Bret L.

1994-01-01

A method and apparatus for depositing thin films of materials such as metals, oxides and nitrides at low temperature relies on a supersonic free jet of inert carrier gas to transport vapor species generated from an evaporation source to the surface of a substrate. Film deposition vapors are generated from solid film precursor materials, including those in the form of wires or powders. The vapor from these sources is carried downstream in a low pressure supersonic jet of inert gas to the surface of a substrate where the vapors deposit to form a thin film. A reactant gas can be introduced into the gas jet to form a reaction product with the evaporated material. The substrate can be moved from the gas jet past a gas jet containing a reactant gas in which a discharge has been generated, the speed of movement being sufficient to form a thin film which is chemically composed of the evaporated material and reactant gases.

Multiwavelength and parsec-scale properties of extragalactic jets. Doctoral Thesis Award Lecture 2015

NASA Astrophysics Data System (ADS)

Müller, C.

2016-07-01

Extragalactic jets originating from the central supermassive black holes of active galaxies are powerful, highly relativistic plasma outflows, emitting light from the radio up to the γ-ray regime. The details of their formation, composition and emission mechanisms are still not completely clear. The combination of high-resolution observations using very long baseline interferometry (VLBI) and multiwavelength monitoring provides the best insight into these objects. Here, such a combined study of sources of the TANAMI sample is presented, investigating the parsec-scale and high-energy properties. The TANAMI program is a multiwavelength monitoring program of a sample of the radio and γ-ray brightest extragalactic jets in the southern sky, below -30o declination. We obtain the first-ever VLBI images for most of the sources, providing crucial information on the jet kinematics and brightness distribution at milliarcsecond resolution. Two particular sources are discussed in detail: PMN J1603-4904 , which can be classified either as an atypical blazar or a γ-ray loud (young) radio galaxy, and Centaurus A, the nearest radio-loud active galaxy. The VLBI kinematics of the innermost parsec of Centaurus A's jet result in a consistent picture of an accelerated jet flow with a spine-sheath like structure.

Effect of inlet conditions on the turbulent statistics in a buoyant jet

NASA Astrophysics Data System (ADS)

Kumar, Rajesh; Dewan, Anupam

2015-11-01

Buoyant jets have been the subject of research due to their technological and environmental importance in many physical processes, such as, spread of smoke and toxic gases from fires, release of gases form volcanic eruptions and industrial stacks. The nature of the flow near the source is initially laminar which quickly changes into turbulent flow. We present large eddy simulation of a buoyant jet. In the present study a careful investigation has been done to study the influence of inlet conditions at the source on the turbulent statistics far from the source. It has been observed that the influence of the initial conditions on the second-order buoyancy terms extends further in the axial direction from the source than their influence on the time-averaged flow and second-order velocity statistics. We have studied the evolution of vortical structures in the buoyant jet. It has been shown that the generation of helical vortex rings in the vicinity of the source around a laminar core could be the reason for the larger influence of the inlet conditions on the second-order buoyancy terms as compared to the second-order velocity statistics.

Preliminary study of a hydrogen peroxide rocket for use in moving source jet noise tests

NASA Technical Reports Server (NTRS)

Plencner, R. M.

1977-01-01

A preliminary investigation was made of using a hydrogen peroxide rocket to obtain pure moving source jet noise data. The thermodynamic cycle of the rocket was analyzed. It was found that the thermodynamic exhaust properties of the rocket could be made to match those of typical advanced commercial supersonic transport engines. The rocket thruster was then considered in combination with a streamlined ground car for moving source jet noise experiments. When a nonthrottlable hydrogen peroxide rocket was used to accelerate the vehicle, propellant masses and/or acceleration distances became too large. However, when a throttlable rocket or an auxiliary system was used to accelerate the vehicle, reasonable propellant masses could be obtained.

Search for X-ray jets from high redshift radio sources.

NASA Astrophysics Data System (ADS)

Schwartz, Daniel A.; Cheung, Teddy; Gobeille, Doug; Marshall, Herman L.; Migliori, Giulia; Siemiginowska, Aneta; Wardle, John F. C.; Worrall, Diana M.; Birkinshaw, Mark

2018-06-01

We are conducting a Chandra "snapshot" survey of 14 radio quasars at redshifts z>3. These are selected to have one sided, arc-sec scale structure, either a jet or lobe, and come from a complete, objectively-defined sample of sources with radio flux density > 70 mJy, and with a spectroscopic redshift from the SDSS. Our objectives are to find X-ray emitting jets, compare the X-ray and radio morphology, and detect X-ray emission arising from inverse Compton scattering of the cosmic microwave background even for those cases where the radio emission is no longer detectable. For this meeting, we expect 5 of the 14 sources to have been observed.

Uncovering Nature’s 100 TeV Particle Accelerators in the Large-Scale Jets of Quasars

NASA Astrophysics Data System (ADS)

Georganopoulos, Markos; Meyer, Eileen; Sparks, William B.; Perlman, Eric S.; Van Der Marel, Roeland P.; Anderson, Jay; Sohn, S. Tony; Biretta, John A.; Norman, Colin Arthur; Chiaberge, Marco

2016-04-01

Since the first jet X-ray detections sixteen years ago the adopted paradigm for the X-ray emission has been the IC/CMB model that requires highly relativistic (Lorentz factors of 10-20), extremely powerful (sometimes super-Eddington) kpc scale jets. R I will discuss recently obtained strong evidence, from two different avenues, IR to optical polarimetry for PKS 1136-135 and gamma-ray observations for 3C 273 and PKS 0637-752, ruling out the EC/CMB model. Our work constrains the jet Lorentz factors to less than ~few, and leaves as the only reasonable alternative synchrotron emission from ~100 TeV jet electrons, accelerated hundreds of kpc away from the central engine. This refutes over a decade of work on the jet X-ray emission mechanism and overall energetics and, if confirmed in more sources, it will constitute a paradigm shift in our understanding of powerful large scale jets and their role in the universe. Two important findings emerging from our work will also discussed be: (i) the solid angle-integrated luminosity of the large scale jet is comparable to that of the jet core, contrary to the current belief that the core is the dominant jet radiative outlet and (ii) the large scale jets are the main source of TeV photon in the universe, something potentially important, as TeV photons have been suggested to heat up the intergalactic medium and reduce the number of dwarf galaxies formed.

A SOLAR CORONAL JET EVENT TRIGGERS A CORONAL MASS EJECTION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Jiajia; Wang, Yuming; Shen, Chenglong

2015-11-10

In this paper, we present multi-point, multi-wavelength observations and analysis of a solar coronal jet and coronal mass ejection (CME) event. Employing the GCS model, we obtained the real (three-dimensional) heliocentric distance and direction of the CME and found it to propagate at a high speed of over 1000 km s{sup −1}. The jet erupted before the CME and shared the same source region. The temporal and spacial relationship between these two events lead us to the possibility that the jet triggered the CME and became its core. This scenario hold the promise of enriching our understanding of the triggeringmore » mechanism of CMEs and their relations to coronal large-scale jets. On the other hand, the magnetic field configuration of the source region observed by the Solar Dynamics Observatory (SDO)/HMI instrument along with the off-limb inverse Y-shaped configuration observed by SDO/AIA in the 171 Å passband provide the first detailed observation of the three-dimensional reconnection process of a large-scale jet as simulated in Pariat et al. The eruption process of the jet highlights the importance of filament-like material during the eruption of not only small-scale X-ray jets, but likely also of large-scale EUV jets. Based on our observations and analysis, we propose the most probable mechanism for the whole event, with a blob structure overlaying the three-dimensional structure of the jet, to describe the interaction between the jet and the CME.« less

Significance of shock structure on supersonic jet mixing noise of axisymmetric nozzles

NASA Astrophysics Data System (ADS)

Kim, Chan M.; Krejsa, Eugene A.; Khavaran, Abbas

1994-09-01

One of the key technical elements in NASA's high speed research program is reducing the noise level to meet the federal noise regulation. The dominant noise source is associated with the supersonic jet discharged from the engine exhaust system. Whereas the turbulence mixing is largely responsible for the generation of the jet noise, a broadband shock-associated noise is also generated when the nozzle operates at conditions other than its design. For both mixing and shock noise components, because the source of the noise is embedded in the jet plume, one can expect that jet noise can be predicted from the jet flowfield computation. Mani et al. developed a unified aerodynamic/acoustic prediction scheme by applying an extension of Reichardt's aerodynamic model to compute turbulent shear stresses which are utilized in estimating the strength of the noise source. Although this method produces a fast and practical estimate of the jet noise, a modification by Khavaran et al. has led to an improvement in aerodynamic solution. The most notable feature in this work is that Reichardt's model is replaced with the computational fluid dynamics (CFD) solution of Reynolds-averaged Navier-Stokes equations. The major advantage of this work is that the essential, noise-related flow quantities such as turbulence intensity and shock strength can be better predicted. The predictions were limited to a shock-free design condition and the effect of shock structure on the jet mixing noise was not addressed. The present work is aimed at investigating this issue. Under imperfectly expanded conditions the existence of the shock cell structure and its interaction with the convecting turbulence structure may not only generate a broadband shock-associated noise but also change the turbulence structure, and thus the strength of the mixing noise source. Failure in capturing shock structures properly could lead to incorrect aeroacoustic predictions.

Significance of shock structure on supersonic jet mixing noise of axisymmetric nozzles

NASA Technical Reports Server (NTRS)

Kim, Chan M.; Krejsa, Eugene A.; Khavaran, Abbas

1994-01-01

One of the key technical elements in NASA's high speed research program is reducing the noise level to meet the federal noise regulation. The dominant noise source is associated with the supersonic jet discharged from the engine exhaust system. Whereas the turbulence mixing is largely responsible for the generation of the jet noise, a broadband shock-associated noise is also generated when the nozzle operates at conditions other than its design. For both mixing and shock noise components, because the source of the noise is embedded in the jet plume, one can expect that jet noise can be predicted from the jet flowfield computation. Mani et al. developed a unified aerodynamic/acoustic prediction scheme by applying an extension of Reichardt's aerodynamic model to compute turbulent shear stresses which are utilized in estimating the strength of the noise source. Although this method produces a fast and practical estimate of the jet noise, a modification by Khavaran et al. has led to an improvement in aerodynamic solution. The most notable feature in this work is that Reichardt's model is replaced with the computational fluid dynamics (CFD) solution of Reynolds-averaged Navier-Stokes equations. The major advantage of this work is that the essential, noise-related flow quantities such as turbulence intensity and shock strength can be better predicted. The predictions were limited to a shock-free design condition and the effect of shock structure on the jet mixing noise was not addressed. The present work is aimed at investigating this issue. Under imperfectly expanded conditions the existence of the shock cell structure and its interaction with the convecting turbulence structure may not only generate a broadband shock-associated noise but also change the turbulence structure, and thus the strength of the mixing noise source. Failure in capturing shock structures properly could lead to incorrect aeroacoustic predictions.

The entrainment rate for a row of turbulent jets. M.S. Thesis Final Report

NASA Technical Reports Server (NTRS)

Gordon, Eliott B.; Greber, Isaac

1990-01-01

Entrainment rates for a row of isothermal circular air jets issuing into a quiescent environment are found by integrating velocity distributions measured by a linearized hot-wire anemometer. Jet spacing to jet diameter ratios of 2.5, 5, 10, and 20 are studied at jet Reynold's numbers ranging from 5110 to 12070. Velocity distributions are determined at regular downstream intervals at axial distances equal to 16.4 to 164 jet diameters from the jet source. The entrainment rates for the four spacing configurations vary monotonically with increasing spacing/diameter between the limiting case of the slot jet entrainment rate (where the jet spacing to diameter ratio is zero) and the circular jet entrainment rate (in which the spacing to diameter ratio is infinity).

Acoustics of Excited Jets: A Historical Perspective

NASA Technical Reports Server (NTRS)

Brown, Cliffard A.

2005-01-01

The idea that a jet may be excited by external forcing is not new. The first published demonstration of a jet responding to external pressure waves occurred in the mid-1800's. It was not, however, until the 1950's, with the advent of commercial jet aircraft, that interest in the subject greatly increased. Researchers first used excited jets to study the structure of the jet and attempt to determine the nature of the noise sources. The jet actuators of the time limited the range (Reynolds and Mach numbers) of jets that could be excited. As the actuators improved, more realistic jets could be studied. This has led to a better understanding of how jet excitation may be used not only as a research tool to understand the flow properties and noise generation process, but also as a method to control jet noise.

Constraints on Jet Formation Mechanisms with the Most Energetic Giant Outbursts in MS 0735+7421

NASA Astrophysics Data System (ADS)

Li, Shuang-Liang; Cao, Xinwu

2012-07-01

Giant X-ray cavities lie in some active galactic nuclei (AGNs) locating in central galaxies of clusters, which are estimated to have stored 1055-1062 erg of energy. Most of these cavities are thought to be inflated by jets of AGNs on a timescale of >~ 107 years. The jets can be either powered by rotating black holes or the accretion disks surrounding black holes, or both. The observations of giant X-ray cavities can therefore be used to constrain jet formation mechanisms. In this work, we choose the most energetic cavity, MS 0735+7421, with stored energy ~1062 erg, to constrain the jet formation mechanisms and the evolution of the central massive black hole in this source. The bolometric luminosity of the AGN in this cavity is ~10-5 L Edd, however, the mean power of the jet required to inflate the cavity is estimated as ~0.02L Edd, which implies that the source has previously experienced strong outbursts. During outbursts, the jet power and the mass accretion rate should be significantly higher than its present values. We construct an accretion disk model in which the angular momentum and energy carried away by jets are properly included to calculate the spin and mass evolution of the massive black hole. In our calculations, different jet formation mechanisms are employed, and we find that the jets generated with the Blandford-Znajek (BZ) mechanism are unable to produce the giant cavity with ~1062 erg in this source. Only the jets accelerated with a combination of the Blandford-Payne and BZ mechanisms can successfully inflate such a giant cavity if the magnetic pressure is close to equipartition with the total (radiation+gas) pressure of the accretion disk. For a dynamo-generated magnetic field in the disk, such an energetic giant cavity can be inflated by the magnetically driven jets only if the initial black hole spin parameter a 0 >~ 0.95. Our calculations show that the final spin parameter a of the black hole is always ~0.9-0.998 for all the computational examples that can provide sufficient energy for the cavity of MS 0735+7421.

A near-infrared spectroscopic survey of massive jets towards extended green objects

NASA Astrophysics Data System (ADS)

Caratti o Garatti, A.; Stecklum, B.; Linz, H.; Garcia Lopez, R.; Sanna, A.

2015-01-01

Context. Protostellar jets and outflows are the main outcome of the star formation process, and their analysis can provide us with major clues about the ejection and accretion history of young stellar objects (YSOs). Aims: We aim at deriving the main physical properties of massive jets from near-infrared (NIR) observations, comparing them to those of a large sample of jets from low-mass YSOs, and relating them to the main features of their driving sources. Methods: We present a NIR imaging (H2 and Ks) and low-resolution spectroscopic (0.95-2.50 μm) survey of 18 massive jets towards GLIMPSE extended green objects (EGOs), driven by intermediate- and high-mass YSOs, which have bolometric luminosities (Lbol) between 4 × 102 and 1.3 × 105 L⊙. Results: As in low-mass jets, H2 is the primary NIR coolant, detected in all the analysed flows, whereas the most important ionic tracer is [Fe ii], detected in half of the sampled jets. Our analysis indicates that the emission lines originate from shocks at high temperatures and densities. No fluorescent emission is detected along the flows, regardless of the source bolometric luminosity. On average, the physical parameters of these massive jets (i.e. visual extinction, temperature, column density, mass, and luminosity) have higher values than those measured in their low-mass counterparts. The morphology of the H2 flows is varied, mostly depending on the complex, dynamic, and inhomogeneous environment in which these massive jets form and propagate. All flows and jets in our sample are collimated, showing large precession angles. Additionally, the presence of both knots and jets suggests that the ejection process is continuous with burst episodes, as in low-mass YSOs. We compare the flow H2 luminosity with the source bolometric luminosity confirming the tight correlation between these two quantities. Five sources, however, display a lower LH2/Lbol efficiency, which might be related to YSO evolution. Most important, the inferred LH2 vs. Lbol relationship agrees well with the correlation between the momentum flux of the CO outflows and the bolometric luminosities of high-mass YSOs indicating that outflows from high-mass YSOs are momentum driven, as are their low-mass counterparts. We also derive a less stringent correlation between the inferred mass of the H2 flows and Lbol of the YSOs, indicating that the mass of the flow depends on the driving source mass. Conclusions: By comparing the physical properties of jets in the NIR, a continuity from low- to high-mass jets is identified. Massive jets appear as a scaled-up version of their low-mass counterparts in terms of their physical parameters and origin. Nevertheless, there are consistent differences such as a more variegated morphology and, on average, stronger shock conditions, which are likely due to the different environment in which high-mass stars form. Based on observations collected at the European Southern Observatory La Silla, Chile, 080.C-0573(A), 083.C-0846(A).Appendices are available in electronic form at http://www.aanda.org

Empirical source noise prediction method with application to subsonic coaxial jet mixing noise

NASA Technical Reports Server (NTRS)

Zorumski, W. E.; Weir, D. S.

1982-01-01

A general empirical method, developed for source noise predictions, uses tensor splines to represent the dependence of the acoustic field on frequency and direction and Taylor's series to represent the dependence on source state parameters. The method is applied to prediction of mixing noise from subsonic circular and coaxial jets. A noise data base of 1/3-octave-band sound pressure levels (SPL's) from 540 tests was gathered from three countries: United States, United Kingdom, and France. The SPL's depend on seven variables: frequency, polar direction angle, and five source state parameters: inner and outer nozzle pressure ratios, inner and outer stream total temperatures, and nozzle area ratio. A least-squares seven-dimensional curve fit defines a table of constants which is used for the prediction method. The resulting prediction has a mean error of 0 dB and a standard deviation of 1.2 dB. The prediction method is used to search for a coaxial jet which has the greatest coaxial noise benefit as compared with an equivalent single jet. It is found that benefits of about 6 dB are possible.

The Scaling of Broadband Shock-Associated Noise with Increasing Temperature

NASA Technical Reports Server (NTRS)

Miller, Steven A. E.

2013-01-01

A physical explanation for the saturation of broadband shock-associated noise (BBSAN) intensity with increasing jet stagnation temperature has eluded investigators. An explanation is proposed for this phenomenon with the use of an acoustic analogy. To isolate the relevant physics, the scaling of BBSAN peak intensity level at the sideline observer location is examined. The equivalent source within the framework of an acoustic analogy for BBSAN is based on local field quantities at shock wave shear layer interactions. The equivalent source combined with accurate calculations of the propagation of sound through the jet shear layer, using an adjoint vector Green's function solver of the linearized Euler equations, allows for predictions that retain the scaling with respect to stagnation pressure and allows for saturation of BBSAN with increasing stagnation temperature. The sources and vector Green's function have arguments involving the steady Reynolds- Averaged Navier-Stokes solution of the jet. It is proposed that saturation of BBSAN with increasing jet temperature occurs due to a balance between the amplication of the sound propagation through the shear layer and the source term scaling.

XTE J1946+274 = GRO J1944+26: An Enigmatic Be/X-ray Binary

NASA Technical Reports Server (NTRS)

Wilson, Colleen A.; Finger, Mark H.; Coe, M. J.; Negueruela, Ignacio; Six, N. Frank (Technical Monitor)

2002-01-01

XTE J1946+274 = GRO J1944+26 is a 15.8-s Be/X-ray pulsar discovered simultaneously in 1998 September with the, Burst and Transient Source Experiment (BATSE) on the Compton Gamma Ray Observatory (CGRO) and the All-Sky Monitor (ASM) on the Rossi X-ray Timing Explorer (RXTE). Pulse timing analysis yielded an orbital period of 169.2 days, a moderate eccentricity of 0.33, and implied a mass function of 9.7 solar mass. We observed evidence for an accretion disk, a correlation between measured spin-up rate and flux, which was fitted to obtain a distance estimate of 9.2 +/- 1.0 kpc. XTE J1946+274 remained active from 1998 September - 2001 July, undergoing 13 outbursts that were not locked in orbital phase. Comparing RXTE PCA observations from the initial bright outburst in 1998 and the last pair of outburst in 2001, we found energy and intensity dependent pulse profile variations in both outbursts and hardening spectra with increasing intensity during the fainter 2001 outbursts. In 2001 July, optical H(alpha) observations indicate a density perturbation appeared in the Be disk as the X-ray outbursts ceased. We propose that the equatorial plane of the Be star is inclined with respect to the orbital plane in this system and that this inclination may produce the unusual outburst behavior of the system.

Battery-Powered RF Pre-Ionization System for the Caltech Magnetohydrodynamically-Driven Jet Experiment: RF Discharge Properties and MHD-Driven Jet Dynamics

NASA Astrophysics Data System (ADS)

Chaplin, Vernon H.

This thesis describes investigations of two classes of laboratory plasmas with rather different properties: partially ionized low pressure radiofrequency (RF) discharges, and fully ionized high density magnetohydrodynamically (MHD)-driven jets. An RF pre-ionization system was developed to enable neutral gas breakdown at lower pressures and create hotter, faster jets in the Caltech MHD-Driven Jet Experiment. The RF plasma source used a custom pulsed 3 kW 13.56 MHz RF power amplifier that was powered by AA batteries, allowing it to safely float at 4-6 kV with the cathode of the jet experiment. The argon RF discharge equilibrium and transport properties were analyzed, and novel jet dynamics were observed. Although the RF plasma source was conceived as a wave-heated helicon source, scaling measurements and numerical modeling showed that inductive coupling was the dominant energy input mechanism. A one-dimensional time-dependent fluid model was developed to quantitatively explain the expansion of the pre-ionized plasma into the jet experiment chamber. The plasma transitioned from an ionizing phase with depressed neutral emission to a recombining phase with enhanced emission during the course of the experiment, causing fast camera images to be a poor indicator of the density distribution. Under certain conditions, the total visible and infrared brightness and the downstream ion density both increased after the RF power was turned off. The time-dependent emission patterns were used for an indirect measurement of the neutral gas pressure. The low-mass jets formed with the aid of the pre-ionization system were extremely narrow and collimated near the electrodes, with peak density exceeding that of jets created without pre-ionization. The initial neutral gas distribution prior to plasma breakdown was found to be critical in determining the ultimate jet structure. The visible radius of the dense central jet column was several times narrower than the axial current channel radius, suggesting that the outer portion of the jet must have been force free, with the current parallel to the magnetic field. The studies of non-equilibrium flows and plasma self-organization being carried out at Caltech are relevant to astrophysical jets and fusion energy research.

Cold gas and the disruptive effect of a young radio jet

NASA Astrophysics Data System (ADS)

Morganti, R.; Oosterloo, T.; Maccagni, F. M.; Geréb, K.; Oonk, J. B. R.; Tadhunter, C. N.

2016-02-01

Newly born and young radio sources are in a delicate phase of their life. Their jets are fighting their way through the surrounding gaseous medium, strongly experiencing this interaction while, at the same time, impacting and affecting the interstellar medium (ISM). Quantifying this interplay has far reaching implications: the rate of occurrence and the magnitude of the interaction between radio jets and ISM can have consequences for the evolution of the host galaxy. Despite the hostile conditions, cold gas - neutral atomic hydrogen and molecular - has been often found in these objects and can be also associated to fast outflows. Here we present the results from two studies of H I and molecular gas illustrating what can be learned from these phases of the gas. We first describe a statistical study of the occurrence and kinematics of H I observed in absorption with the Westerbork Synthesis Radio telescope. This allows a comparison between the properties of the gas in extended and in compact/young radio sources. The study shows that the young radio sources not only have an higher detection rate of H I, but also systematically broader and more asymmetric H I profiles, most of them blueshifted. This supports the idea that we are looking at young radio jets making their way through the surrounding ISM, which also appears to be, on average, richer in gas than in evolved radio sources. Signatures of the impact of the jet are seen in the kinematics of the gas, but the resulting outflows may be characteristic of only the initial phase of the radio source evolution. However, even among the young sources, we identify a population that remains undetected in H I even after stacking their profiles. Orientation effects can only partly explain the result. These objects either are genuinely gas-poor or have different conditions of the medium, e.g. higher spin temperature. The upcoming blind H I surveys which are about to start with large-field-of-view radio facilities (i.e. Apertif at the WSRT and ASKAP) will allow us to expand the statistics and reach even higher sensitivity with stacking techniques. We further present the case of the radio source IC 5063 where we have used the molecular gas observed with ALMA to trace in detail the jet impacting the ISM. The kinematics of the cold, molecular gas co-spatial with the radio plasma shows this process in action. The ALMA data reveal a fast outflow of molecular gas extending along the entire radio jet (˜1 kpc), with the highest outflow velocities at the location of the brighter hot-spot. The results can be described by a scenario of a radio plasma jet expanding into a clumpy medium, interacting directly with the clouds and inflating a cocoon that drives a lateral outflow into the ISM. This is consistent with the scenario proposed by numerical simulations for the expansion of a young radio jet, confirming the disruptive effect the radio plasma jet can have. Following this case, more ALMA observations of nearby young radio sources will be able to confirm if this process is common, as expected, in the initial phase of the evolution of the radio source.

Reducing Propulsion Airframe Aeroacoustic Interactions With Uniquely Tailored Chevrons: 3. Jet-Flap Interaction

NASA Technical Reports Server (NTRS)

Thomas, Russ H.; Mengle, Vinod G.; Brunsniak, Leon; Elkoby, Ronen

2006-01-01

Propulsion airframe aeroacoustic (PAA) interactions, resulting from the integration of engine and airframe, lead to azimuthal asymmetries in the flow/acoustic field, e.g., due to the interaction between the exhaust jet flow and the pylon, the wing and its high-lift devices, such as, flaps and flaperons. In the first two parts of this series we have presented experimental results which show that isolated and installed nozzles with azimuthally varying chevrons (AVCs) can reduce noise more than conventional chevrons when integrated with a pylon and a wing with flaps at take-off conditions. In this paper, we present model-scale experimental results for the reduction of jet-flap interaction noise source due to these AVCs and document the PAA installation effects (difference in noise between installed and isolated nozzle configurations) at both approach and take-off conditions. It is found that the installation effects of both types of chevron nozzles, AVCs and conventional, are reversed at approach and take-off, in that there is more installed noise reduction at approach and less at take-off compared to that of the isolated nozzles. Moreover, certain AVCs give larger total installed noise benefits at both conditions compared to conventional chevrons. Phased microphone array results show that at approach conditions (large flap deflection, low jet speed and low ambient Mach number), chevrons gain more noise benefit from reducing jetflap interaction noise than they do from quieting the jet plume noise source which is already weak at these low jet speeds. In contrast, at take-off (small flap deflection, high jet speed and high ambient Mach number) chevrons reduce the dominant jet plume noise better than the reduction they create in jet-flap interaction noise source. In addition, fan AVCs with enhanced mixing near the pylon are found to reduce jet-flap interaction noise better than conventional chevrons at take-off.

Prediction of Turbulence-Generated Noise in Unheated Jets. Part 1; JeNo Technical Manual (Version 1.0)

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Bridges, James; Georgiadis, Nicholas

2005-01-01

The model-based approach, used by the JeNo code to predict jet noise spectral directivity, is described. A linearized form of Lilley's equation governs the non-causal Green s function of interest, with the non-linear terms on the right hand side identified as the source. A Reynolds-averaged Navier-Stokes (RANS) solution yields the required mean flow for the solution of the propagation Green s function in a locally parallel flow. The RANS solution also produces time- and length-scales needed to model the non-compact source, the turbulent velocity correlation tensor, with exponential temporal and spatial functions. It is shown that while an exact non-causal Green s function accurately predicts the observed shift in the location of the spectrum peak with angle as well as the angularity of sound at low to moderate Mach numbers, the polar directivity of radiated sound is not entirely captured by this Green s function at high subsonic and supersonic acoustic Mach numbers. Results presented for unheated jets in the Mach number range of 0.51 to 1.8 suggest that near the peak radiation angle of high-speed jets, a different source/Green s function convolution integral may be required in order to capture the peak observed directivity of jet noise. A sample Mach 0.90 heated jet is also discussed that highlights the requirements for a comprehensive jet noise prediction model.

Successive Two-sided Loop Jets Caused by Magnetic Reconnection between Two Adjacent Filamentary Threads

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tian, Zhanjun; Liu, Yu; Shen, Yuandeng

We present observational analysis of two successive two-sided loop jets observed by the ground-based New Vacuum Solar Telescope and the space-borne Solar Dynamics Observatory . The two successive two-sided loop jets manifested similar evolution processes and both were associated with the interaction of two small-scale adjacent filamentary threads, magnetic emerging, and cancellation processes at the jet’s source region. High temporal and high spatial resolution observations reveal that the two adjacent ends of the two filamentary threads are rooted in opposite magnetic polarities within the source region. The two threads approached each other, and then an obvious brightening patch is observedmore » at the interaction position. Subsequently, a pair of hot plasma ejections are observed heading in opposite directions along the paths of the two filamentary threads at a typical speed for two-sided loop jets of the order 150 km s{sup −1}. Close to the end of the second jet, we report the formation of a bright hot loop structure at the source region, which suggests the formation of new loops during the interaction. Based on the observational results, we propose that the observed two-sided loop jets are caused by magnetic reconnection between the two adjacent filamentary threads, largely different from the previous scenario that a two-sided loop jet is generated by magnetic reconnection between an emerging bipole and the overlying horizontal magnetic fields.« less

Numerical and Experimental Determination of the Geometric Far Field for Round Jets

NASA Technical Reports Server (NTRS)

Koch, L. Danielle; Bridges, James; Brown, Cliff; Khavaran, Abbas

2003-01-01

To reduce ambiguity in the reporting of far field jet noise, three round jets operating at subsonic conditions have recently been studied at the NASA Glenn Research Center. The goal of the investigation was to determine the location of the geometric far field both numerically and experimentally. The combination of the WIND Reynolds-Averaged Navier-Stokes solver and the MGBK jet noise prediction code was used for the computations, and the experimental data was collected in the Aeroacoustic Propulsion Laboratory. While noise sources are distributed throughout the jet plume, at great distances from the nozzle the noise will appear to be emanating from a point source and the assumption of linear propagation is valid. Closer to the jet, nonlinear propagation may be a problem, along with the known geometric issues. By comparing sound spectra at different distances from the jet, both from computational methods that assume linear propagation, and from experiments, the contributions of geometry and nonlinearity can be separately ascertained and the required measurement distance for valid experiments can be established. It is found that while the shortest arc considered here (approx. 8D) was already in the geometric far field for the high frequency sound (St greater than 2.0), the low frequency noise due to its extended source distribution reached the geometric far field at or about 50D. It is also found that sound spectra at far downstream angles does not strictly scale on Strouhal number, an observation that current modeling does not capture.

MOJAVE: MONITORING OF JETS IN ACTIVE GALACTIC NUCLEI WITH VLBA EXPERIMENTS. VIII. FARADAY ROTATION IN PARSEC-SCALE AGN JETS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hovatta, Talvikki; Lister, Matthew L.; Aller, Margo F.

2012-10-01

We report observations of Faraday rotation measures for a sample of 191 extragalactic radio jets observed within the MOJAVE program. Multifrequency Very Long Baseline Array observations were carried out over 12 epochs in 2006 at four frequencies between 8 and 15 GHz. We detect parsec-scale Faraday rotation measures in 149 sources and find the quasars to have larger rotation measures on average than BL Lac objects. The median core rotation measures are significantly higher than in the jet components. This is especially true for quasars where we detect a significant negative correlation between the magnitude of the rotation measure andmore » the de-projected distance from the core. We perform detailed simulations of the observational errors of total intensity, polarization, and Faraday rotation, and concentrate on the errors of transverse Faraday rotation measure gradients in unresolved jets. Our simulations show that the finite image restoring beam size has a significant effect on the observed rotation measure gradients, and spurious gradients can occur due to noise in the data if the jet is less than two beams wide in polarization. We detect significant transverse rotation measure gradients in four sources (0923+392, 1226+023, 2230+114, and 2251+158). In 1226+023 the rotation measure is for the first time seen to change sign from positive to negative over the transverse cuts, which supports the presence of a helical magnetic field in the jet. In this source we also detect variations in the jet rotation measure over a timescale of three months, which are difficult to explain with external Faraday screens and suggest internal Faraday rotation. By comparing fractional polarization changes in jet components between the four frequency bands to depolarization models, we find that an external purely random Faraday screen viewed through only a few lines of sight can explain most of our polarization observations, but in some sources, such as 1226+023 and 2251+158, internal Faraday rotation is needed.« less

Capillary jets in normal gravity: Asymptotic stability analysis and excitation using Maxwell and ultrasonic radiation stresses

NASA Astrophysics Data System (ADS)

Lonzaga, Joel Barci

Both modulated ultrasonic radiation pressure and oscillating Maxwell stress from a voltage-modulated ring electrode are employed to excite low-frequency capillary modes of a weakly tapered liquid jet issuing from a nozzle. The capillary modes are waves formed at the surface of the liquid jet. The ultrasound is internally applied to the liquid jet waveguide and is cut off at a location resulting in a significantly enhanced oscillating radiation stress near the cutoff location. Alternatively, the thin electrode can generate a highly localized oscillating Maxwell stress on the jet surface. Experimental evidence shows that a spatially unstable mode with positive group velocity (propagating downstream from the excitation source) and a neutral mode with negative group velocity are both excited. Reflection at the nozzle boundary converts the neutral mode into an unstable one that interferes with the original unstable mode. The interference effect is observed downstream from the source using a laser-based optical extinction technique that detects the surface waves while the modulation frequency is scanned. This technique is very sensitive to small-amplitude disturbances. Existing linear, convective stability analyses on liquid jets accounting for the gravitational effect (i.e. varying radius and velocity) appear to be not applicable to non-slender, slow liquid jets considered here where the gravitational effect is found substantial at low flow rates. The multiple-scales method, asymptotic expansion and WKB approximation are used to derive a dispersion relation for the capillary wave similar to one obtained by Rayleigh but accounting for the gravitational effect. These mathematical tools aided by Langer's transformation are also used to derive a uniformly valid approximation for the acoustic wave propagation in a tapered cylindrical waveguide. The acoustic analytical approximation is validated by finite-element calculations. The jet response is modeled using a hybrid of Fourier analysis and the WKB-type analysis as proposed by Lighthill. The former derives the mode response to a highly localized source while the latter governs the mode propagation in a weakly inhomogeneous jet away from the source.

Modeling Coma Gas Jets in Comet Hale-Bopp

NASA Technical Reports Server (NTRS)

Lederer, S. M.; Campins, H.

2001-01-01

We present an analysis of OH, CN, and C2 jets observed in Comet Hale-Bopp. The relative contributions from and composition of the coma gas sources, and the parameters describing the active areas responsible for the gas jets will be discussed. Additional information is contained in the original extended abstract.

Source Identification and Location Techniques

NASA Technical Reports Server (NTRS)

Weir, Donald; Bridges, James; Agboola, Femi; Dougherty, Robert

2001-01-01

Mr. Weir presented source location results obtained from an engine test as part of the Engine Validation of Noise Reduction Concepts program. Two types of microphone arrays were used in this program to determine the jet noise source distribution for the exhaust from a 4.3 bypass ratio turbofan engine. One was a linear array of 16 microphones located on a 25 ft. sideline and the other was a 103 microphone 3-D "cage" array in the near field of the jet. Data were obtained from a baseline nozzle and from numerous nozzle configuration using chevrons and/or tabs to reduce the jet noise. Mr. Weir presented data from two configurations: the baseline nozzle and a nozzle configuration with chevrons on both the core and bypass nozzles. This chevron configuration had achieved a jet noise reduction of 4 EPNdB in small scale tests conducted at the Glenn Research Center. IR imaging showed that the chevrons produced significant improvements in mixing and greatly reduced the length of the jet potential core. Comparison of source location data from the 1-D phased array showed a shift of the noise sources towards the nozzle and clear reductions of the sources due to the noise reduction devices. Data from the 3-D array showed a single source at a frequency of 125 Hz. located several diameters downstream from the nozzle exit. At 250 and 400 Hz., multiple sources, periodically spaced, appeared to exist downstream of the nozzle. The trend of source location moving toward the nozzle exit with increasing frequency was also observed. The 3-D array data also showed a reduction in source strength with the addition of chevrons. The overall trend of source location with frequency was compared for the two arrays and with classical experience. Similar trends were observed. Although overall trends with frequency and addition of suppression devices were consistent between the data from the 1-D and the 3-D arrays, a comparison of the details of the inferred source locations did show differences. A flight test is planned to determine if the hardware tested statically will achieve similar reductions in flight.

A method for predicting static-to-flight effects on coaxial jet noise

NASA Astrophysics Data System (ADS)

Bryce, William D.; Chinoy, Cyrus B.

2016-08-01

Previously-published work has provided a theoretical modelling of the jet noise from coaxial nozzle configurations in the form of component sources which can each be quantified in terms of modified single-stream jets. This modelling has been refined and extended to cover a wide range of the operating conditions of aircraft turbofan engines with separate exhaust flows, encompassing area ratios from 0.8 to 4. The objective has been to establish a basis for predicting the static-to-flight changes in the coaxial jet noise by applying single-stream flight effects to each of the sources comprising the modelling of the coaxial jet noise under static conditions. Relatively few experimental test points are available for validation although these do cover the full extent of the jet conditions and area ratios considered. The experimental results are limited in their frequency range by practical considerations but the static-to-flight changes in the third-octave SPLs are predicted to within a standard deviation of 0.4 dB although the complex effects of jet refraction and convection cause the errors to increase at low flight emission angles to the jet axis. The modelling also provides useful insights into the mechanisms involved in the generation of coaxial jet noise and has facilitated the identification of inadequacies in the experimental simulation of flight effects.

ORIGIN OF THE COMPLEX RADIO STRUCTURE IN BAL QSO 1045+352

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kunert-Bajraszewska, Magdalena; Gawronski, Marcin P.; Janiuk, Agnieszka

2010-08-01

We present new, more sensitive, high-resolution radio observations of a compact broad absorption line (BAL) quasar, 1045+352, made with the EVN+MERLIN at 5 GHz. These observations allowed us to trace the connection between the arcsecond structure and the radio core of the quasar. The radio morphology of 1045+352 is dominated by a knotty jet showing several bends. We discuss possible scenarios that could explain such a complex morphology: galaxy merger, accretion disk instability, precession of the jet, and jet-cloud interactions. It is possible that we are witnessing an ongoing jet precession in this source due to internal instabilities within themore » jet flow; however, a dense environment detected in the submillimeter band and an outflowing material suggested by the X-ray absorption could strongly interact with the jet. It is difficult to establish the orientation between the jet axis and the observer in 1045+352 because of the complex structure. Nevertheless, taking into account the most recent inner radio structure, we conclude that the radio jet is oriented close to the line of sight, which can mean that the opening angle of the accretion disk wind can be large in this source. We also suggest that there is no direct correlation between the jet-observer orientation and the possibility of observing BALs.« less

High-sensitivity survey of a pole-on disk-jet system around high mass YSOs

NASA Astrophysics Data System (ADS)

Motogi, Kazuhito; Walsh, Andrew; Hirota, Tomoya; Niinuma, Kotaro; Sugiyama, Koichiro; Fujisawa, Kenta; Yonekura, Yoshinori; Honma, Mareki; Sorai, Kazuo

2013-10-01

Recent theoretical works have suggested that detailed evolution of a high mass protostellar object highly depends on effective accretion rate and exact accretion geometry. Observational studies of the innermost accretion properties are, thus, an essential task in the ALMA era. High mass protostellar objects with a pole-on disk-jet system are, hence, excellent targets for such a study, since an outflow cavity reduces the total optical depth along the line-of-sight. Our previous studies have shown that some singular water maser sources called dominant blue-shifted masers (DBSMs) are plausible candidates of pole-on disk jet systems. There are, however, still two major problems as follows, (1) Some DBSMs can be a "fake", because of the significant variability of water masers. (2) It is difficult to verify the sources are really in pole-on geometry. The first problems can be checked with the thermal counterparts, and the second problem can be tested by morphologies of the class II CH3OH maser sources. We propose a high-sensitivity survey of real “pole-on” disk-jet systems towards the southern ten DBSMs. This new survey consists of multi-band observations between C/X/K/W bands. We will start from the C/X-continuum survey in this semester. Scientific goals in this semester are, (1) surveying radio jet activities with the C/X continuum emission, (2) estimating the inclination angle of disk-jet systems based on the morphologies of the CH3OH maser spots. (3) determining the exact positions of driving sources.

AT THE SOURCE OF AN EXTRAGALACTIC JET

NASA Technical Reports Server (NTRS)

2002-01-01

Artist's concept of the formation region of M87's jet. An accretion disk (red-yellow) surrounds the black hole, and its magnetic field lines twist tightly to channel the outpouring subatomic particles into a narrow jet. The jet opens widely near the black hole, then is shaped into a narrower beam within a light-year of the black hole. Credit: NASA and Ann Feild (Space Telescope Science Institute)

Bulk Comptonization of the Cosmic Microwave Background by Extragalactic Jets as a Probe of their Matter Content

NASA Technical Reports Server (NTRS)

Georganopoulos, Markos; Kazanas, Demosthenes; Perlman, Eric; Stecker, Floyd W.

2004-01-01

We propose a method for estimating the composition, i.e. the relative amounts of leptons and protons, of extragalactic jets which exhibit Chandra - detected knots in their kpc scale jets. The method relies on measuring, or setting upper limits on, the component of the Cosmic Microwave Background (CMB) radiation that is bulk-Comptonized by the cold electrons in the relativistically flowing jet. These measurements, along with modeling of the broadband knot emission that constrain the bulk Lorentz factor GAMMA of the jets, can yield estimates of the jet power carried by protons and leptons. We provide an explicit calculation of the spectrum of the bulk-Comptonized (BC) CMB component and apply these results to PKS 0637 - 752 and 3C 273, two superluminal quasars with Chandra - detected large scale jets. What makes these sources particularly suited for such a procedure is the absence of significant non-thermal jet emission in the 'bridge', the region between the core and the first bright jet knot, which guarantees that most of the electrons are cold there, leaving the BC scattered CMB radiation as the only significant source of photons in this region. At lambda = 3.6 - 8.0 microns, the most likely band to observe the BC scattered CMB emission, the Spitzer angular resolution (approximately 1" - 3") is considerably smaller than the the 'bridges' of these jets (approximately 10"), making it possible to both measure and resolve this emission.

A New Modal Analysis Method to put Constraints on the Aqueous Alteration of CR Chondrites and Estimate the Unaltered CR Composition

NASA Technical Reports Server (NTRS)

Perronnet, M.; Zolensky, M. E.; Gounelle, M.; Schwandt, C. S.

2007-01-01

CR carbonaceous chondrites are of the major interest since they contain one of the most primitive organic matters. However, aqueous alteration has more or less overprinted their original features in a way that needed to be assessed. That was done in the present study by comparing the mineralogy of the most altered CR1 chondrite, GRO 95577, to a less altered CR2, Renazzo. Their modal analyses were achieved thanks to a new method, based on X-ray elemental maps acquired on electron microprobe, and on IDL image treatment. It allowed the collection of new data on the composition of Renazzo and confirmed the classification of GRO 95577 as a CR1. New alteration products for CRs, vermiculite and clinochlore, were observed. The homogeneity of the Fe-poor clays in the CR1 and the distinctive matrix composition in the two chondrites suggest a wide-range of aqueous alteration on CRs. The preservation of the outlines of the chondrules in GRO 95577 and the elemental transfers of Al, Fe and Ca throughout the chondrule and of Fe and S from the matrix to the chondrule favor the idea of an asteroidal location of the aqueous alteration. From their mineralogical descriptions and modal abundances, the element repartitions in Renazzo and GRO 95577 were computed. It indicates a possible relationship between these two chondrites via an isochemical alteration process. Knowing the chemical reactions that occurred during the alteration, it was thus possible to decipher the mineralogical modal abundances in the unaltered CR body.

A New Modal Analysis Method to put Constraints on the Aqueous Alteration of CR Chondrites and Estimate the Unaltered CR Composition

NASA Technical Reports Server (NTRS)

Perronnet, M.; Zolensky, M. E.; Gounelle, M.; Schwandt, C. S.

2007-01-01

carbonaceous chondrites are of the major interest since they contain one of the most primitive organic matters. However, aqueous alteration has more or less overprinted their original features in a way that needed to be assessed. That was done in the present study by comparing the mineralogy of the most altered CR1 chondrite, GRO 95577, to a less altered CR2, Renazzo. Their modal analyses were achieved thanks to a new method, based on X-ray elemental maps acquired on electron microprobe, and on IDL image treatment. It allowed the collection of new data on the composition of Renazzo and confirmed the classification of GRO 95577 as a CR1. New alteration products for CRs, vermiculite and clinochlore, were observed. The homogeneity of the Fe-poor clays in the CR1 and the distinctive matrix composition in the two chondrites suggest a wide-range of aqueous alteration on CRs. The preservation of the outlines of the chondrules in GRO 95577 and the elemental transfers of Al, Fe and Ca throughout the chondrule and of Fe and S from the matrix to the chondrule favor the idea of an asteroidal location of the aqueous alteration. From their mineralogical descriptions and modal abundances, the element repartitions in Renazzo and GRO 95577 were computed. It indicates a possible relationship between these two chondrites via an isochemical alteration process. Knowing the chemical reactions that occurred during the alteration, it was thus possible to decipher the mineralogical modal abundances in the unaltered CR body.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Butt, Y M; Romero, G E; Torres, D F

We suggest that ultraluminous X-ray sources (ULXs) and some of the variable low latitude EGRET gamma-ray sources may be two different manifestations of the same underlying phenomena: high-mass microquasars with relativistic jets forming a small angle with the line of sight (i.e. microblazars). Microblazars with jets formed by relatively cool plasma (Lorentz factors for the leptons up to a few hundreds) naturally lead to ULXs. If the jet contains very energetic particles (high-energy cutoff above Lorentz factors of several thousands) the result is a relatively strong gamma-ray source. As pointed out by Kaufman Bernads, Romero & Mirabel (2002), a gamma-raymore » microblazar will always have an X-ray counterpart (although it might be relatively weak), whereas X-ray microblazars might have no gamma-ray counterparts.« less

Nature of radio feature formed by re-started jet activity in 3C 84 and its relation with γ-ray emissions

NASA Astrophysics Data System (ADS)

Nagai, H.; Chida, H.; Kino, M.; Orienti, M.; D'Ammando, F.; Giovannini, G.; Hiura, K.

2016-02-01

Re-started jet activity occurred in the bright nearby radio source 3C 84 in about 2005. The re-started jet is forming a prominent component (namely C3) at the tip of jet. The component has showed an increase in radio flux density for more than 7 years while the radio spectrum remains optically thin. This suggests that the component is the head of a radio lobe including a hotspot where the particle acceleration occurs. Thus, 3C 84 is a unique laboratory to study the physical properties at the very early stage of radio source evolution. Another important aspect is that high energy and very high energy γ-ray emissions are detected from this source. The quest for the site of γ-ray emission is quite important to obtain a better understanding of γ-ray emission mechanisms in radio galaxies. In this paper, we review the observational results from very long baseline interferometry (VLBI) monitoring of 3C 84 reported in series of our previous papers. We argue the nature of re-started jet/radio lobe and its relation with high-energy emission.

Establishing Consensus Turbulence Statistics for Hot Subsonic Jets

NASA Technical Reports Server (NTRS)

Bridges, James; Werner, Mark P.

2010-01-01

Many tasks in fluids engineering require knowledge of the turbulence in jets. There is a strong, although fragmented, literature base for low order statistics, such as jet spread and other meanvelocity field characteristics. Some sources, particularly for low speed cold jets, also provide turbulence intensities that are required for validating Reynolds-averaged Navier-Stokes (RANS) Computational Fluid Dynamics (CFD) codes. There are far fewer sources for jet spectra and for space-time correlations of turbulent velocity required for aeroacoustics applications, although there have been many singular publications with various unique statistics, such as Proper Orthogonal Decomposition, designed to uncover an underlying low-order dynamical description of turbulent jet flow. As the complexity of the statistic increases, the number of flows for which the data has been categorized and assembled decreases, making it difficult to systematically validate prediction codes that require high-level statistics over a broad range of jet flow conditions. For several years, researchers at NASA have worked on developing and validating jet noise prediction codes. One such class of codes, loosely called CFD-based or statistical methods, uses RANS CFD to predict jet mean and turbulent intensities in velocity and temperature. These flow quantities serve as the input to the acoustic source models and flow-sound interaction calculations that yield predictions of far-field jet noise. To develop this capability, a catalog of turbulent jet flows has been created with statistics ranging from mean velocity to space-time correlations of Reynolds stresses. The present document aims to document this catalog and to assess the accuracies of the data, e.g. establish uncertainties for the data. This paper covers the following five tasks: Document acquisition and processing procedures used to create the particle image velocimetry (PIV) datasets. Compare PIV data with hotwire and laser Doppler velocimetry (LDV) data published in the open literature. Compare different datasets acquired at roughly the same flow conditions to establish uncertainties. Create a consensus dataset for a range of hot jet flows, including uncertainty bands. Analyze this consensus dataset for self-consistency and compare jet characteristics to those of the open literature. One final objective fulfilled by this work was the demonstration of a universal scaling for the jet flow fields, at least within the region of interest to aeroacoustics. The potential core length and the spread rate of the half-velocity radius were used to collapse of the mean and turbulent velocity fields over the first 20 jet diameters in a highly satisfying manner.

Fluid jet electric discharge source

DOEpatents

Bender, Howard A [Ripon, CA

2006-04-25

A fluid jet or filament source and a pair of coaxial high voltage electrodes, in combination, comprise an electrical discharge system to produce radiation and, in particular, EUV radiation. The fluid jet source is composed of at least two serially connected reservoirs, a first reservoir into which a fluid, that can be either a liquid or a gas, can be fed at some pressure higher than atmospheric and a second reservoir maintained at a lower pressure than the first. The fluid is allowed to expand through an aperture into a high vacuum region between a pair of coaxial electrodes. This second expansion produces a narrow well-directed fluid jet whose size is dependent on the size and configuration of the apertures and the pressure used in the reservoir. At some time during the flow of the fluid filament, a high voltage pulse is applied to the electrodes to excite the fluid to form a plasma which provides the desired radiation; the wavelength of the radiation being determined by the composition of the fluid.

Assessing reliability and validity of the GroPromo audit tool for evaluation of grocery store marketing and promotional environments.

PubMed

Kerr, Jacqueline; Sallis, James F; Bromby, Erica; Glanz, Karen

2012-01-01

To evaluate reliability and validity of a new tool for assessing the placement and promotional environment in grocery stores. Trained observers used the GroPromo instrument in 40 stores to code the placement of 7 products in 9 locations within a store, along with other promotional characteristics. To test construct validity, customers' receipts were coded for percentage of food purchases in each of the categories. Of the 22 categories tested, 21 demonstrated moderate to high interrater reliability (intraclass correlation ≥ 0.61). When more unhealthy items were placed in prominent locations, a higher percentage of money was spent on less-healthy items, and a lower percentage of food dollars were spent on fruits and vegetables. The prominence of locations was more important than the number of locations. The GroPromo tool can be used to assess promotional practices in stores. Data may help advocates campaign for more healthy food items in key promotional locations. Copyright © 2012 Society for Nutrition Education and Behavior. Published by Elsevier Inc. All rights reserved.

Mission safety evaluation report for STS-37, postflight edition

NASA Technical Reports Server (NTRS)

Hill, William C.; Finkel, Seymour I.

1991-01-01

STS-37/Atlantis was launched on April 5, 1991 from Kennedy Space Center launch complex 39B at 9:23 a.m. Eastern Standard Time (EST). Launch was delayed 4 minutes 45 seconds because of safety concerns about the low cloud ceiling and the wind direction in the potential blast area. Based on the limited number and type of inflight anomalies encountered, the Space Shuttle operated satisfactorily throughout the STS-37 mission. A contingency EVA was performed by the crew on Flight Day (FD) 3 to free a sticky Gamma Ray Observatory (GRO) high gain antenna, after which the GRO primary payload was successfully deployed by the Orbiter's Remote Manipulator System. The GRO, which weighed just over 35,000 lbs, was the heaviest NASA science satellite ever deployed by the Space Shuttle into low Earth orbit. The scheduled entry/landing on FD 6 was waved off for one day due to high wind conditions at Edwards Air Force Base. Atlantis landed on FD 7, 11 April 1991 on Edwards AFB lakebed runway 33 at 9:55 a.m. Eastern Daylight Time.

X-ray Variability In Extragalactic Jets as Seen by Chandra

NASA Astrophysics Data System (ADS)

Trevor, Max; Meyer, Eileen; Georganopoulos, Markos; Aubin, Sam; Hewitt, Jennifer; DeNigris, Natalie; Whitley, Kevin

2018-01-01

The unrivaled spatial resolution of Chandra has lead to the detection of over 100 extragalactic jetsemitting X-rays on kiloparsec scales, far from the central AGN. These jets are understood to be powerful redistributors of energy on galactic and extragalactic scales, with important effects on galaxy evolution and cluster heating. However, we lack an understanding of many important jet properties, including the particle makeup, particle acceleration characteristics, and total energy content, and even how fast the jet is at kpc scales. In the most powerful jets, a persistently open question is the nature of the emission mechanism for the Chandra-observed X-rays. While inverse Compton upscattering of CMB photons (IC/CMB) by a still-relativistic jet is widely adopted, our group has very recently ruled it out in several cases, suggesting that the X-rays from powerful sources, like the low-power jets, have a synchrotron origin, albeit one with unknown origins, requiring in-situ lepton acceleration at least up to 100 TeV. A very efficient way to extend this result to many more sources is to check for variability of the large scale jet X-ray emission, something that is definitively not expected in the case of IC/CMB due to the extremely long cooling times of the electrons responsible for the emission, but it is plausible if the X-rays are of synchrotron nature. Based on previously published observations of X-ray variability in the jets of M87 and Pictor A, as well as preliminary results suggesting variability in two more powerful jets, we have examined archival observations of over 40 jets which have been imaged twice or more with Chandra for variability, with timescales of a few to nearly 14 years. This analysis has two main goals, namely (i) to confirm a synchrotron origin for the X-rays in powerful sources, as variability is inconsistent with the competing IC/CMB model and (ii) to use the timescales and characteristics (e.g., spectral changes) of any detected X-ray variability to place limits on the emitting region size and magnetic field.

Recent advances concerning an understanding of sound transmission through engine nozzles and jets

NASA Technical Reports Server (NTRS)

Bechert, D.; Michel, U.; Dfizenmaier, E.

1978-01-01

Experiments on the interaction between a turbulent jet and pure tone sound coming from inside the jet nozzle are reported. This is a model representing the sound transmission from sound sources in jet engines through the nozzle and the jet flow into the far field. It is shown that pure tone sound at low frequencies is considerably attenuated by the jet flow, whereas it is conserved at higher frequencies. On the other hand, broadband jet noise can be amplified considerably by a pure tone excitation. Both effects seem not to be interdependent. Knowledge on how they are created and on relevant parameter dependences allow new considerations for the development of sound attenuators.

A simple counter-flow cooling system for a supersonic free-jet beam source assembly

NASA Astrophysics Data System (ADS)

Barr, M.; Fahy, A.; Martens, J.; Dastoor, P. C.

2016-05-01

A simple design for an inexpensive, cooled, free-jet beam source is described. The source assembly features an integrated cooling system as supplied by a counter-flow of chilled nitrogen, and is composed primarily of off-the-shelf tube fittings. The design facilitates rapid implementation and eases subsequent alignment with respect to any downstream beamline aperture. The source assembly outlined cools the full length of the stagnation volume, offering temperature control down to 100 K and long-term temperature stability better than ±1 K.

A simple counter-flow cooling system for a supersonic free-jet beam source assembly

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barr, M.; Fahy, A.; Martens, J.

2016-05-15

A simple design for an inexpensive, cooled, free-jet beam source is described. The source assembly features an integrated cooling system as supplied by a counter-flow of chilled nitrogen, and is composed primarily of off-the-shelf tube fittings. The design facilitates rapid implementation and eases subsequent alignment with respect to any downstream beamline aperture. The source assembly outlined cools the full length of the stagnation volume, offering temperature control down to 100 K and long-term temperature stability better than ±1 K.

Progress Toward Improving Jet Noise Predictions in Hot Jets

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Kenzakowski, Donald C.

2007-01-01

An acoustic analogy methodology for improving noise predictions in hot round jets is presented. Past approaches have often neglected the impact of temperature fluctuations on the predicted sound spectral density, which could be significant for heated jets, and this has yielded noticeable acoustic under-predictions in such cases. The governing acoustic equations adopted here are a set of linearized, inhomogeneous Euler equations. These equations are combined into a single third order linear wave operator when the base flow is considered as a locally parallel mean flow. The remaining second-order fluctuations are regarded as the equivalent sources of sound and are modeled. It is shown that the hot jet effect may be introduced primarily through a fluctuating velocity/enthalpy term. Modeling this additional source requires specialized inputs from a RANS-based flowfield simulation. The information is supplied using an extension to a baseline two equation turbulence model that predicts total enthalpy variance in addition to the standard parameters. Preliminary application of this model to a series of unheated and heated subsonic jets shows significant improvement in the acoustic predictions at the 90 degree observer angle.

Laboratory modeling of multiple zonal jets on the polar beta-plane

NASA Astrophysics Data System (ADS)

Afanasyev, Y.

2011-12-01

Zonal jets observed in the oceans and atmospheres of planets are studied in a laboratory rotating tank. The fluid layer in the rotating tank has parabolic free surface and dynamically simulates the polar beta-plane where the Coriolis parameter varies quadratically with distance from the pole. Velocity and surface elevation fields are measured with an optical altimetry method (Afanasyev et al., Exps Fluids 2009). The flows are induced by a localized buoyancy source along radial direction. The baroclinic flow consisting of a field of eddies propagates away from the source due West and forms zonal jets (Fig. 1). Barotropic jets ahead of the baroclinic flow are formed by radiation of beta plumes. Inside the baroclinic flow the jets flow between the chains of eddies. Experimental evidence of so-called noodles (baroclinic instability mode with motions in the radial, North-South direction) theoretically predicted by Berloff et al. (JFM, JPO 2009) was found in our experiments. Beta plume radiation mechanism and the mechanism associated with the instability of noodles are likely to contribute to formation of jets in the baroclinic flow.

T Pyxidis: The First Cataclysmic Variable with a Collimated Jet

NASA Technical Reports Server (NTRS)

Shahbaz, T.; Livio, M.; Southwell, K. A.; Charles, P. A.

1997-01-01

We present the first observational evidence for a collimated jet in a cataclysmic variable system; the recurrent nova T Pyxidis. Optical spectra show bipolar components of H(alpha) with velocities approx. 1400 km/s, very similar to those observed in the supersoft X-ray sources and in SS 433. We argue that a key ingredient of the formation of jets in the supersoft X-ray sources and T Pyx (in addition to an accretion disk threaded by a vertical magnetic field), is the presence of nuclear burning on the surface of the white dwarf.

Theoretical study of the effects of refraction on the noise produced by turbulence in jets

NASA Technical Reports Server (NTRS)

Graham, E. W.; Graham, B. B.

1974-01-01

The production of noise by turbulence in jets is an extremely complex problem. One aspect of that problem, the transmission of acoustic disturbances from the interior of the jet through the mean velocity profile and into the far field is studied. The jet (two-dimensional or circular cylindrical) is assumed infinitely long with mean velocity profile independent of streamwise location. The noise generator is a sequence of transient sources drifting with the surrounding fluid and confined to a short length of the jet.

Jet Measurements for Development of Jet Noise Prediction Tools

NASA Technical Reports Server (NTRS)

Bridges, James E.

2006-01-01

The primary focus of my presentation is the development of the jet noise prediction code JeNo with most examples coming from the experimental work that drove the theoretical development and validation. JeNo is a statistical jet noise prediction code, based upon the Lilley acoustic analogy. Our approach uses time-average 2-D or 3-D mean and turbulent statistics of the flow as input. The output is source distributions and spectral directivity.

An extension of the Lighthill theory of jet noise to encompass refraction and shielding

NASA Technical Reports Server (NTRS)

Ribner, Herbert S.

1995-01-01

A formalism for jet noise prediction is derived that includes the refractive 'cone of silence' and other effects; outside the cone it approximates the simple Lighthill format. A key step is deferral of the simplifying assumption of uniform density in the dominant 'source' term. The result is conversion to a convected wave equation retaining the basic Lighthill source term. The main effect is to amend the Lighthill solution to allow for refraction by mean flow gradients, achieved via a frequency-dependent directional factor. A general formula for power spectral density emitted from unit volume is developed as the Lighthill-based value multiplied by a squared 'normalized' Green's function (the directional factor), referred to a stationary point source. The convective motion of the sources, with its powerful amplifying effect, also directional, is already accounted for in the Lighthill format: wave convection and source convection are decoupled. The normalized Green's function appears to be near unity outside the refraction dominated 'cone of silence', this validates our long term practice of using Lighthill-based approaches outside the cone, with extension inside via the Green's function. The function is obtained either experimentally (injected 'point' source) or numerically (computational aeroacoustics). Approximation by unity seems adequate except near the cone and except when there are shrouding jets: in that case the difference from unity quantifies the shielding effect. Further extension yields dipole and monopole source terms (cf. Morfey, Mani, and others) when the mean flow possesses density gradients (e.g., hot jets).

Modeling unsteady sound refraction by coherent structures in a high-speed jet

NASA Astrophysics Data System (ADS)

Kan, Pinqing; Lewalle, Jacques

2011-11-01

We construct a visual model for the unsteady refraction of sound waves from point sources in a Ma = 0.6 jet. The mass and inviscid momentum equations give an equation governing acoustic fluctuations, including anisotropic propagation, attenuation and sources; differences with Lighthill's equation will be discussed. On this basis, the theory of characteristics gives canonical equations for the acoustic paths from any source into the far field. We model a steady mean flow in the near-jet region including the potential core and the mixing region downstream of its collapse, and model the convection of coherent structures as traveling wave perturbations of this mean flow. For a regular distribution of point sources in this region, we present a visual rendition of fluctuating distortion, lensing and deaf spots from the viewpoint of a far-field observer. Supported in part by AFOSR Grant FA-9550-10-1-0536 and by a Syracuse University Graduate Fellowship.

Study on High Speed Lithium Jet For Neutron Source of Boron Neutron Capture Therapy (BNCT)

NASA Astrophysics Data System (ADS)

Takahashi, Minoru; Kobayashi, Tooru; Zhang, Mingguang; Mák, Michael; Štefanica, Jirí; Dostál, Václav; Zhao, Wei

The feasibility study of a liquid lithium type proton beam target was performed for the neutron source of the boron neutron capture therapy (BNCT). As the candidates of the liquid lithium target, a thin sheet jet and a thin film flow on a concave wall were chosen, and a lithium flow experiment was conducted to investigate the hydrodynamic stability of the targets. The surfaces of the jets and film flows with a thickness of 0.5 mm and a width of 50 mm were observed by means of photography. It has been found that a stable sheet jet and a stable film flow on a concave wall can be formed up to certain velocities by using a straight nozzle and a curved nozzle with the concave wall, respectively.

Effect of Heating on Turbulent Density Fluctuations and Noise Generation From High Speed Jets

NASA Technical Reports Server (NTRS)

Panda, Jayanta; Seasholtz, Richard G.; Elam, Kristie A.; Mielke, Amy F.; Eck, Dennis G.

2004-01-01

Heated jets in a wide range of temperature ratios (TR), and acoustic Mach numbers (Ma) were investigated experimentally using far field microphones and a molecular Rayleigh scattering technique. The latter provided density fluctuations measurements. Two sets of operating conditions were considered: (1) TR was varied between 0.84 and 2.7 while Ma was fixed at 0.9; (2) Ma was varied between 0.6 and 1.48, while TR was fixed at 2.27. The implementation of the molecular Rayleigh scattering technique required dust removal and usage of a hydrogen combustor to avoid soot particles. Time averaged density measurements in the first set of data showed differences in the peripheral density shear layers between the unheated and heated jets. The nozzle exit shear layer showed increased turbulence level with increased plume temperature. Nevertheless, further downstream the density fluctuations spectra are found to be nearly identical for all Mach number and temperature ratio conditions. To determine noise sources a correlation study between plume density fluctuations and far field sound pressure fluctuations was conducted. For all jets the core region beyond the end of the potential flow was found to be the strongest noise source. Except for an isothermal jet, the correlations did not differ significantly with increasing temperature ratio. The isothermal jet created little density fluctuations. Although the far field noise from this jet did not show any exceptional trend, the flow-sound correlations were very low. This indicated that the density fluctuations only acted as a "tracer parameter" for the noise sources.

An Evolving Compact Jet in the Black Hole X-Ray Binary Maxi J1836-194

NASA Technical Reports Server (NTRS)

Russell, D. M.; Russell, T. D.; Miller-Jones, J. C. A.; O'Brien, K.; Soria, R.; Sivakoff, G. R.; Slaven-Blair, T.; Lewis, F.; Markoff, S.; Homan, J.;

RXTE spectra of the Galactic microquasar GRO J1655-40 during the 2005 outburst

NASA Astrophysics Data System (ADS)

Saito, Koji; Yamaoka, K.; Fukuyama, M.; Miyakawa, T. G.; Yoshida, A.; Homan, J.

We report on the results of a detailed spectral analysis of 389 RXTE observations of the Galac- tic microquasar GRO J1655-40, performed during its 2005 outburst. The maximum luminosity reached during this outburst was 1.4 times higher than in the previous (1996-1997) outburst. However, the spectral behavior during the two outbursts was very similar. In particular, L disk was 4 proportional to Tin up to the same critical luminosity and in both outbursts there were periods during which the energy spectra were very soft, but could not be fit with standard disk models.

Orbital Spacecraft Consumables Resupply System (OSCRS). Volume 3: Program Cost Estimate

NASA Technical Reports Server (NTRS)

Perry, D. L.

1986-01-01

A cost analysis for the design, development, qualification, and production of the monopropellant and bipropellant Orbital Spacecraft Consumable Resupply System (OSCRS) tankers, their associated avionics located in the Orbiter payload bay, and the unique ground support equipment (GSE) and airborne support equipment (ASE) required to support operations is presented. Monopropellant resupply for the Gamma Ray Observatory (GRO) in calendar year 1991 is the first defined resupply mission with bipropellant resupply missions expected in the early to mid 1990's. The monopropellant program estimate also includes contractor costs associated with operations support through the first GRO resupply mission.

The Aqueous Alteration of CR Chondrites: Experiments and Geochemical Modeling

NASA Technical Reports Server (NTRS)

Perronnet, M.; Berger, G.; Zolensky, M. E.; Toplis, M. J.; Kolb, V. M.; Bajagic, M.

2007-01-01

CR carbonaceous chondrites are of major interest since they contain some of the most primitive organic matter known. However, aqueous alteration has more or less overprinted their original features in a way that needs to be assessed. This study was initiated by comparing the mineralogy and modal abundances of the most altered CR1 chondrite, GRO 95577, to a less altered CR2. Calculated element distributions imply that GRO 95577 may result from aqueous alteration of Renazzo by an isochemical process on their parent asteroid, whose mineralogical composition was estimated ( Unaltered CR shown included table).

Herausforderungen durch die deutsche Wiedervereinigung

NASA Astrophysics Data System (ADS)

Stäglin, Reiner

Die Wiedervereinigung stellte auch die Statistik vor große Aufgaben. Die als Organ der staatlichen Planung staatsnah orientierte Statistik der DDR musste auf das zur Neutralität und wissenschaftlichen Unabhängigkeit verpflichtete System der Bundesrepublik umgestellt werden. Ebenso verlangten die Universitäten eine Neuorientierung. Die Deutsche Statistische Gesellschaft hat sich vor allem dreier Aufgaben mit großem Engagement, aber auch mit Bedachtsamkeit angenommen: Aufnahme und Integration der Statistiker aus den neuen Bundesländern in die Gesellschaft, Begleitung der Neuausrichtung des Faches Statistik an deren Hochschulen und Sicherung sowie Nutzung von Datenbeständen der ehemaligen DDR.

Acoustically excited heated jets. 2: In search of a better understanding

NASA Technical Reports Server (NTRS)

Lepicovsky, J.; Ahuja, K. K.; Brown, W. H.; Salikuddin, M.; Morris, P. J.

1988-01-01

The second part of a three-part report on the effects of acoustic excitation on jet mixing includes the results of an experimental investigation directed at resolving the question of poor excitability of some of the heated jets. The theoretical predictions discussed in Part 1 are examined to find explanations for the observed discrepancies between the measured and the predicted results. Additional testing was performed by studying the self excitation of the shock containing hot jets and also by exciting the jet by sound radiated through source tubes located externally around the periphery of the jet. The effects of nozzle-exit boundary layer conditions on jet excitability was also investigated. It is concluded that high-speed, heated jet mixing rates and consequently also the jet excitability strongly depends on nozzle exit boundary layer conditions.

Sound Radiated by a Wave-Like Structure in a Compressible Jet

NASA Technical Reports Server (NTRS)

Golubev, V. V.; Prieto, A. F.; Mankbadi, R. R.; Dahl, M. D.; Hixon, R.

2003-01-01

This paper extends the analysis of acoustic radiation from the source model representing spatially-growing instability waves in a round jet at high speeds. Compared to previous work, a modified approach to the sound source modeling is examined that employs a set of solutions to linearized Euler equations. The sound radiation is then calculated using an integral surface method.

Calibration of neutron detectors on the Joint European Torus.

PubMed

Batistoni, Paola; Popovichev, S; Conroy, S; Lengar, I; Čufar, A; Abhangi, M; Snoj, L; Horton, L

2017-10-01

The present paper describes the findings of the calibration of the neutron yield monitors on the Joint European Torus (JET) performed in 2013 using a 252 Cf source deployed inside the torus by the remote handling system, with particular regard to the calibration of fission chambers which provide the time resolved neutron yield from JET plasmas. The experimental data obtained in toroidal, radial, and vertical scans are presented. These data are first analysed following an analytical approach adopted in the previous neutron calibrations at JET. In this way, a calibration function for the volumetric plasma source is derived which allows us to understand the importance of the different plasma regions and of different spatial profiles of neutron emissivity on fission chamber response. Neutronics analyses have also been performed to calculate the correction factors needed to derive the plasma calibration factors taking into account the different energy spectrum and angular emission distribution of the calibrating (point) 252 Cf source, the discrete positions compared to the plasma volumetric source, and the calibration circumstances. All correction factors are presented and discussed. We discuss also the lessons learnt which are the basis for the on-going 14 MeV neutron calibration at JET and for ITER.

The Most Compact Bright Radio-loud AGNs. II. VLBA Observations of 10 Sources at 43 and 86 GHz

NASA Astrophysics Data System (ADS)

Cheng, X.-P.; An, T.; Hong, X.-Y.; Yang, J.; Mohan, P.; Kellermann, K. I.; Lister, M. L.; Frey, S.; Zhao, W.; Zhang, Z.-L.; Wu, X.-C.; Li, X.-F.; Zhang, Y.-K.

2018-01-01

Radio-loud active galactic nuclei (AGNs), hosting powerful relativistic jet outflows, provide an excellent laboratory for studying jet physics. Very long baseline interferometry (VLBI) enables high-resolution imaging on milli-arcsecond (mas) and sub-mas scales, making it a powerful tool to explore the inner jet structure, shedding light on the formation, acceleration, and collimation of AGN jets. In this paper, we present Very Long Baseline Array observations of 10 radio-loud AGNs at 43 and 86 GHz that were selected from the Planck catalog of compact sources and are among the brightest in published VLBI images at and below 15 GHz. The image noise levels in our observations are typically 0.3 and 1.5 mJy beam‑1 at 43 and 86 GHz, respectively. Compared with the VLBI data observed at lower frequencies from the literature, our observations with higher resolutions (with the highest resolution being up to 0.07 mas at 86 GHz and 0.18 mas at 43 GHz) and at higher frequencies detected new jet components at sub-parsec scales, offering valuable data for studies of the physical properties of the innermost jets. These include the compactness factor of the radio structure (the ratio of core flux density to total flux density), and core brightness temperature ({T}{{b}}). In all these sources, the compact core accounts for a significant fraction (> 60 % ) of the total flux density. Their correlated flux density at the longest baselines is higher than 0.16 Jy. The compactness of these sources make them good phase calibrators of millimeter-wavelength ground-based and space VLBI.

A CONNECTION BETWEEN PLASMA CONDITIONS NEAR BLACK HOLE EVENT HORIZONS AND OUTFLOW PROPERTIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Koljonen, K. I. I.; Russell, D. M.; Bernardini, F.

Accreting black holes are responsible for producing the fastest, most powerful outflows of matter in the universe. The formation process of powerful jets close to black holes is poorly understood, and the conditions leading to jet formation are currently hotly debated. In this paper, we report an unambiguous empirical correlation between the properties of the plasma close to the black hole and the particle acceleration properties within jets launched from the central regions of accreting stellar-mass and supermassive black holes. In these sources the emission of the plasma near the black hole is characterized by a power law at X-raymore » energies during times when the jets are produced. We find that the photon index of this power law, which gives information on the underlying particle distribution, correlates with the characteristic break frequency in the jet spectrum, which is dependent on magnetohydrodynamical processes in the outflow. The observed range in break frequencies varies by five orders of magnitude in sources that span nine orders of magnitude in black hole mass, revealing a similarity of jet properties over a large range of black hole masses powering these jets. This correlation demonstrates that the internal properties of the jet rely most critically on the conditions of the plasma close to the black hole, rather than other parameters such as the black hole mass or spin, and will provide a benchmark that should be reproduced by the jet formation models.« less

A precessing jet in the NGC2264G outflow

NASA Astrophysics Data System (ADS)

McCoey, Carolyn; Teixeira, P. S.; Fich, M.; Lada, C. J.

2007-05-01

We present new infrared imaging of the NGC 2264 G protostellar outflow region, obtained with the Spitzer Space Telescope. A jet in the red (eastern) outflow lobe is clearly detected in all four IRAC bands and, for the first time, is shown to continuously extend over the entire length of the red outflow lobe, as traced by CO observations. The jet also extends to a deeply embedded Class 0 source, VLA2, confirming previous suggestions that it is the driving source of the outflow. The images show that the easternmost part of the jet exhibits what appears to be multiple changes of direction. We consider two possible explanations for the jet morphology: (i) deflection of the jet off the walls of the outflow lobes as proposed by Fich & Lada (1997) and (ii) precession. The jet structure shown in the IRAC images can be largely, although not entirely, explained by a slowly precessing jet (period 8000 yr) that lies mostly on the plane of the sky. In either case it appears that the observed and inferred changes in the jet direction are sufficient to broaden the NGC 2264 G outflow to an extent comparable to that observed in the CO emission. P. S. T. acknowledges support from the scholarship SFRH/BD/13984/2003 awarded by the Fundaçao para a Ciencia e Tecnologia (Portugal). Both M. F. and C. M. are supported by a Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery Grant.

The GRB-SLSN connection: misaligned magnetars, weak jet emergence, and observational signatures

NASA Astrophysics Data System (ADS)

Margalit, Ben; Metzger, Brian D.; Thompson, Todd A.; Nicholl, Matt; Sukhbold, Tuguldur

2018-04-01

Multiple lines of evidence support a connection between hydrogen-poor superluminous supernovae (SLSNe) and long-duration gamma-ray bursts (GRBs). Both classes of events require a powerful central energy source, usually attributed to a millisecond magnetar or an accreting black hole. The GRB-SLSN link raises several theoretical questions: What distinguishes the engines responsible for these different phenomena? Can a single engine power both a GRB and a luminous SN in the same event? We propose a unifying model for magnetar thermalization and jet formation: misalignment between the rotation (Ω) and magnetic dipole (μ) axes dissipates a fraction of the spin-down power by reconnection in the striped equatorial wind, providing a guaranteed source of `thermal' emission to power the supernova. The remaining unthermalized power energizes a relativistic jet. We show that even weak relativistic jets of luminosity ˜1046 erg s-1 can escape the expanding SN ejecta implying that escaping relativistic jets may accompany many SLSNe. We calculate the observational signature of these jets. We show that they may produce transient ultraviolet (UV) cocoon emission lasting a few hours when the jet breaks out of the ejecta surface. A longer lived optical/UV signal may originate from a mildly relativistic wind driven from the interface between the jet and the ejecta walls, which could explain the secondary early-time maximum observed in some SLSNe light curves, such as LSQ14bdq. Our scenario predicts a population of GRB from on-axis jets with extremely long durations, potentially similar to the population of `jetted-tidal disruption events', in coincidence with a small subset of SLSNe.

Investigation of the effects of a moving acoustic medium on jet noise measurements

NASA Technical Reports Server (NTRS)

Cole, J. E., III; Palmer, D. W.

1976-01-01

Noise from an unheated sonic jet in the presence of an external flow is measured in a free-jet wind tunnel using microphones located both inside and outside the flow. Comparison of the data is made with results of similar studies. The results are also compared with theoretical predictions of the source strength for jet noise in the presence of flow and of the effects of sound propagation through a shear layer.

Comparison with Analytical Solution: Generation and Radiation of Acoustic Waves from a 2-D Shear Layer

NASA Technical Reports Server (NTRS)

Dahl, Milo D.

2000-01-01

An acoustic source inside of a 2-D jet excites an instability wave in the shear layer resulting in sound radiating away from the shear layer. Solve the linearized Euler equations to predict the sound radiation outside of the jet. The jet static pressure is assumed to be constant. The jet flow is parallel and symmetric about the x-axis. Use a symmetry boundary condition along the x-axis.

Hard X-ray imaging of the Galactic black hole candidate GX 339 - 4

NASA Technical Reports Server (NTRS)

Covault, C. E.; Grindlay, J. E.; Manandhar, R. P.

1992-01-01

Imaging and spectral observations in the energy range 25-250 keV of the black hole candidate GX 339 - 4 have been obtained with the Energetic X-ray Imaging Telescope Experiment. Observations were made during a balloon flight from Alice Springs, Australia on UT 1989 May 8-10. A single source of nearly 6-sigma significance is detected near the center of the 3.4-deg field of view with a position consistent with GX 339 - 4. This is the first imaging observation of GX 339 - 4 at hard X-ray energies. This result confirms previously reported results from nonimaging experiments showing significant hard X-ray flux up to greater than about 60 keV, with a power-law spectral fit similar to the other black hole candidates such as Cygnus X - 1. The source may have been in an outburst state similar to that recently detected with BATSE on GRO.

CR chondrites: Shock, aqueous alteration and terrestrial weathering

NASA Astrophysics Data System (ADS)

Abreu, N. M.

2012-12-01

CR chondrite are a group asteroidal meteorites, whose importance lies in the exotic organic and presolar material [1] found in its most pristine members and in the broad range of alteration features represented in the remaining specimens in this group [2]. This FE-SEM, EMPA, FIB/TEM study takes advantage of the CR's mineralogical diversity to define different trends of secondary alteration, by comparing the CR3s to the Antarctic CRs: MIL 07525, MIL 07513, GRA 06100, LAP 04516, GRO 03116, GRO 95577, and EET 96259. Collisions and subsequent annealing have affected MIL 07513, GRA 06100, and GRO 03116. Shock stages are often assigned based on progressive changes in the textures of olivines and feldspars. However, the large olivines in shocked CRs do not appear to record these process. Opaques, on the other hand, preserve hallmark signatures of impacts, such as crystalline metal/sulfide veins. Opaque nodules in MIL 07513, GRA 06100, GRO 03116 consist of intergrowths of μm-sub μm FeNi-rich metal, kamacite, Fe-sulfides, Fe-oxides, nm-sized metallic Cu and CuFe (~85 wt.% Cu, 14 wt.% Fe ± < 1wt.% Co, Ni, S) alloys. MIL 07525, GRO 03116, EET 96259, LAP 04516, and GRO 95577 show increasing signs of aqueous alteration, such as increasing amounts of ordered phyllosilicates. Although most phyllosilicates are intergrowths of Fe-rich serpentine and saponite, LAP 04516 also contains large (μm-sized), interpenetrating, Fe-rich (cronstedtite-like) phyllosilicates packages with 14Å basal spacings, similar to those observed in CI chondrites by [3]. Heterogeneously interspersed within phyllosilicates are amorphous Fe-rich silicates and small grains (<50nm) of Fe-rich sulfides, partly oxidized sulfides, and in LAP 04516, tochilinite. Tochilinite shows consistent enrichments in Si (~5 wt.%), suggesting that this meteorite has undergone similar pathways of aqueous alteration as CM chondrites [e.g., 4-5]. Despite the myriad of mineralogical changes triggered by secondary and tertiary process affecting the CRs, the relationship between the average S and Fe contents of matrices are good indicators of the alteration histories of these chondrites. The average S versus Fe contents of CR matrices follow a roughly linear trend. The most aqueously altered CRs (e.g., LAP 04516) have the lowest Fe and the highest S content. The matrices in shocked CRs, MIL 07513, GRA 06100, GRO 03116, have the lowest S content of the studied CRs. They are also the most Fe-rich. The CR3 chondrites fall somewhere in the middle of the S vs. Fe plot. Terrestrial weathering creates some scattering due to its contribution to the Fe-content of the matrix. If the precursor materials of the shocked CRs composi-tionally resemble CR3 chondrites, low S content of shocked CR matrices probably resulted from volatile losses driven by shock and annealing. Whereas increasing Fe-contents are probably linked to impact-driven hydrothermal mobilization of Fe from kamacite nodules. References: [1] Floss et al. 2009. Ap. J. 697: 1242-1255. [2] Abreu N. M. 2007. [3] Tomeoka K. & Buseck P. R. 1988. GCA 52: 1627-1640. [4] Tomeoka K. & Buseck P. R. 1985. GCA 49: 21-49-2163. [5] Rubin A. et al. 2007. GCA 71: 2361-2382. Acknowledgements: Funded by NNX11AH10G grant and conducted at Penn State and ARES-JSC. Meteorite kindly pro-vided by the JSC Antarctic meteorite curators.

Principal component and normal mode analysis of proteins; a quantitative comparison using the GroEL subunit.

PubMed

Skjaerven, Lars; Martinez, Aurora; Reuter, Nathalie

2011-01-01

Principal component analysis (PCA) and normal mode analysis (NMA) have emerged as two invaluable tools for studying conformational changes in proteins. To compare these approaches for studying protein dynamics, we have used a subunit of the GroEL chaperone, whose dynamics is well characterized. We first show that both PCA on trajectories from molecular dynamics (MD) simulations and NMA reveal a general dynamical behavior in agreement with what has previously been described for GroEL. We thus compare the reproducibility of PCA on independent MD runs and subsequently investigate the influence of the length of the MD simulations. We show that there is a relatively poor one-to-one correspondence between eigenvectors obtained from two independent runs and conclude that caution should be taken when analyzing principal components individually. We also observe that increasing the simulation length does not improve the agreement with the experimental structural difference. In fact, relatively short MD simulations are sufficient for this purpose. We observe a rapid convergence of the eigenvectors (after ca. 6 ns). Although there is not always a clear one-to-one correspondence, there is a qualitatively good agreement between the movements described by the first five modes obtained with the three different approaches; PCA, all-atoms NMA, and coarse-grained NMA. It is particularly interesting to relate this to the computational cost of the three methods. The results we obtain on the GroEL subunit contribute to the generalization of robust and reproducible strategies for the study of protein dynamics, using either NMA or PCA of trajectories from MD simulations. © 2010 Wiley-Liss, Inc.

Selecting chemical and ecotoxicological test batteries for risk assessment of trace element-contaminated soils (phyto)managed by gentle remediation options (GRO).

PubMed

Kumpiene, Jurate; Bert, Valérie; Dimitriou, Ioannis; Eriksson, Jan; Friesl-Hanl, Wolfgang; Galazka, Rafal; Herzig, Rolf; Janssen, Jolien; Kidd, Petra; Mench, Michel; Müller, Ingo; Neu, Silke; Oustriere, Nadège; Puschenreiter, Markus; Renella, Giancarlo; Roumier, Pierre-Hervé; Siebielec, Grzegorz; Vangronsveld, Jaco; Manier, Nicolas

2014-10-15

During the past decades a number of field trials with gentle remediation options (GRO) have been established on trace element (TE) contaminated sites throughout Europe. Each research group selects different methods to assess the remediation success making it difficult to compare efficacy between various sites and treatments. This study aimed at selecting a minimum risk assessment battery combining chemical and ecotoxicological assays for assessing and comparing the effectiveness of GRO implemented in seven European case studies. Two test batteries were pre-selected; a chemical one for quantifying TE exposure in untreated soils and GRO-managed soils and a biological one for characterizing soil functionality and ecotoxicity. Soil samples from field studies representing one of the main GROs (phytoextraction in Belgium, Sweden, Germany and Switzerland, aided phytoextraction in France, and aided phytostabilization or in situ stabilization/phytoexclusion in Poland, France and Austria) were collected and assessed using the selected test batteries. The best correlations were obtained between NH4NO3-extractable, followed by NaNO3-extractable TE and the ecotoxicological responses. Biometrical parameters and biomarkers of dwarf beans were the most responsive indicators for the soil treatments and changes in soil TE exposures. Plant growth was inhibited at the higher extractable TE concentrations, while plant stress enzyme activities increased with the higher TE extractability. Based on these results, a minimum risk assessment battery to compare/biomonitor the sites phytomanaged by GROs might consist of the NH4NO3 extraction and the bean Plantox test including the stress enzyme activities. Copyright © 2014 Elsevier B.V. All rights reserved.

Phospholipase B activity and organophosphorus compound toxicity in cultured neural cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Read, David J.; Langford, Lynda; Barbour, Helen R.

2007-03-15

Organophosphorus compounds (OP) such as phenyl saligenin phosphate (PSP) and mipafox (MPX) which cause delayed neuropathy, inhibit neuropathy target esterase (NTE), while OPs such as paraoxon (PXN) react more readily with acetylcholinesterase. In yeast and mammalian cell lines, NTE has been shown to have phospholipase B (PLB) activity which deacylates intracellular phosphatidylcholine to glycerophosphocholine (GroPCho) and can be detected by metabolic labeling with [{sup 14}C]choline. Here we investigated PLB activity in primary cultures of mouse neural cells. In cortical and cerebellar granule neurons and astrocytes, [{sup 14}C]GroPCho labeling was inhibited by PSP and MPX: phenyl dipentylphosphinate (PDPP), a non-neuropathic NTEmore » inhibitor, was more potent, while PXN, was substantially less so. In all three cell types, conversion of [{sup 14}C]phosphatidylcholine to [{sup 14}C]GroPCho over 24 h was relatively small (2.3-14%). Consequently, even with > 80% inhibition of [{sup 14}C]GroPCho production, increased [{sup 14}C]phosphatidylcholine was not detected. At concentrations of 1-10 {mu}M, only PSP was cytotoxic to cortical and cerebellar granule neurons after 24-h exposure. Moreover, dramatic changes in glial cell morphology were induced by PSP, but not PDPP or MPX, with rapid (2-3 h) rounding up of astrocytes and of Schwann cells in cultures of dissociated mouse dorsal root ganglia. We conclude that PLB activity is present in a variety of cultured mouse neural cell types but that acute loss of this activity is not cytotoxic. Conversely, the rapid toxic effects of PSP in vitro suggest that a serine hydrolase distinct from NTE is required continuously by neurons and glia.« less

Effects of OPC-6535 on lipopolysaccharide-induced acute liver injury in the rat: involvement of superoxide and tumor necrosis factor-alpha from hepatic macrophages.

PubMed

Hasegawa, Tadashi; Sakurai, Kazushi; Kambayashi, Yasuhiro; Saniabadi, Abby R; Nagamoto, Hisashi; Tsukada, Katsuhiko; Takahashi, Atsushi; Kuwano, Hiroyuki; Nakano, Minoru

2003-11-01

The objective of this study was to investigate the effects of OPC-6535 on Propionibacterium acnes-primed and lipopolysaccharide-induced liver injury in the rat. P. acnes was administered intravenously to the rat at 16 mg/kg 7 days before the experiments. In liver perfusion experiments, lipopolysaccharide was mixed in perfusion buffer at 2.5 microg/mL. The chemiluminescence method and histochemical reduction of nitro blue tetrazolium were used for detecting superoxide. Release of cytokines into the perfusate was examined. In in vivo experiments, lipopolysaccharide was administered intravenously to the rat at 200 microg/kg. Concentrations of aspartate aminotransferase (AST), alanine aminotransferase (ALT), and cytokines were determined in the plasma, and myeloperoxidase activity was measured in the liver tissue. OPC-6535 was given intravenously at 1 mg/kg 30 minutes before lipopolysaccharide challenge, and was then, in perfusion experiments, added to the buffer at 10 micromol/L. In perfusion experiments, P. acnes and lipopolysaccharide caused dramatic production of superoxide, tumor necrosis factor-alpha (TNF-alpha) and growth-related oncogene/cytokine-induced neutrophil chemoattractant-1 (GRO/CINC-1). Superoxide was mainly from hepatic macrophages. Treatment with OPC-6535 suppressed superoxide and TNF-alpha but did not affect GRO/CINC-1. In in vivo experiments, P. acnes and lipopolysaccharide increased the level of TNF-alpha, GRO/CINC-1, AST and ALT in the plasma, and myeloperoxidase activity in the liver. OPC-6535 reduced TNF-alpha, AST, and ALT, but did not affect GRO/CINC-1 or myeloperoxidase. Attenuation of liver injury by OPC-6535 is believed to be due to its inhibitory effects on superoxide and TNF-alpha production by hepatic macrophages in P. acnes- and lipopolysaccharide-treated rats.

First Optical observation of a microquasar at sub-milliarsec scale: SS 433 resolved by VLTI/GRAVITY

NASA Astrophysics Data System (ADS)

Petrucci, P.; Waisberg, I.; Lebouquin, J.; Dexter, J.; Dubus, G.; Perraut, K.; Kervella, P.; Gravity Collaboration

2017-10-01

We present the first Optical observation at sub-milliarcsec (mas) scale of the famous microquasar SS 433 obtained with the GRAVITY instrument on the VLTI interferometer. This observation reveals the SS 433 inner regions with unprecedent details: The K-band continuum emitting region is dominated by a marginally resolved point source (< 1 mas) embedded inside a diffuse background accounting for 10% of the total flux. The significant visibility drop across the jet lines present in the K-band spectrum, together with the small and nearly identical phases for all baselines, point toward a jet that is offset by < 0.5 mas from the continuum source and resolved in the direction of propagation, with a size of ˜2 mas. Jet emission so close to the central binary system implies that line locking, if relevant to explain the 0.26c jet velocity, operates on elements heavier than hydrogen. Concerning The Brγ line, it is better resolved than the continuum and the S-shape phase signal present across the line suggests an East-West oriented geometry alike the jet direction and supporting a (polar) disk wind origin. This observation show the potentiality of Optical interferometry to constrain the inner regions of high energy sources like microquasars.

Atmospheric pressure plasma jet with high-voltage power supply based on piezoelectric transformer.

PubMed

Babij, Michał; Kowalski, Zbigniew W; Nitsch, Karol; Silberring, Jerzy; Gotszalk, Teodor

2014-05-01

The dielectric barrier discharge plasma jet, an example of the nonthermal atmospheric pressure plasma jet (APPJ), generates low-temperature plasmas that are suitable for the atomization of volatile species and can also be served as an ionization source for ambient mass and ion mobility spectrometry. A new design of APPJ for mass spectrometry has been built in our group. In these plasma sources magnetic transformers (MTs) and inductors are typically used in power supplies but they present several drawbacks that are even more evident when dealing with high-voltage normally used in APPJs. To overcome these disadvantages, high frequency generators with the absence of MT are proposed in the literature. However, in the case of miniaturized APPJs these conventional power converters, built of ferromagnetic cores and inductors or by means of LC resonant tank circuits, are not so useful as piezoelectric transformer (PT) based power converters due to bulky components and small efficiency. We made and examined a novel atmospheric pressure plasma jet with PT supplier served as ionization source for ambient mass spectrometry, and especially mobile spectrometry where miniaturization, integration of components, and clean plasma are required. The objective of this paper is to describe the concept, design, and implementation of this miniaturized piezoelectric transformer-based atmospheric pressure plasma jet.

Atmospheric pressure plasma jet with high-voltage power supply based on piezoelectric transformer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Babij, Michał; Kowalski, Zbigniew W., E-mail: zbigniew.w.kowalski@pwr.wroc.pl; Nitsch, Karol

The dielectric barrier discharge plasma jet, an example of the nonthermal atmospheric pressure plasma jet (APPJ), generates low-temperature plasmas that are suitable for the atomization of volatile species and can also be served as an ionization source for ambient mass and ion mobility spectrometry. A new design of APPJ for mass spectrometry has been built in our group. In these plasma sources magnetic transformers (MTs) and inductors are typically used in power supplies but they present several drawbacks that are even more evident when dealing with high-voltage normally used in APPJs. To overcome these disadvantages, high frequency generators with themore » absence of MT are proposed in the literature. However, in the case of miniaturized APPJs these conventional power converters, built of ferromagnetic cores and inductors or by means of LC resonant tank circuits, are not so useful as piezoelectric transformer (PT) based power converters due to bulky components and small efficiency. We made and examined a novel atmospheric pressure plasma jet with PT supplier served as ionization source for ambient mass spectrometry, and especially mobile spectrometry where miniaturization, integration of components, and clean plasma are required. The objective of this paper is to describe the concept, design, and implementation of this miniaturized piezoelectric transformer-based atmospheric pressure plasma jet.« less

Blazar Jet Physics in the Age of Fermi

DTIC Science & Technology

2010-11-23

in colliding shells, and whether blazars are sources of ultra-high energy cosmic rays . Keywords. galaxies: jets, gamma rays : observations, gamma rays ...colliding shells ejected from the central supermassive black hole are made. The likelihood that blazars accelerate ultra-high energy cosmic rays is...colliding shells, and whether blazars are sources of ultra-high energy cosmic rays . 15. SUBJECT TERMS 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF

Empirical source strength correlations for rans-based acoustic analogy methods

NASA Astrophysics Data System (ADS)

Kube-McDowell, Matthew Tyndall

JeNo is a jet noise prediction code based on an acoustic analogy method developed by Mani, Gliebe, Balsa, and Khavaran. Using the flow predictions from a standard Reynolds-averaged Navier-Stokes computational fluid dynamics solver, JeNo predicts the overall sound pressure level and angular spectra for high-speed hot jets over a range of observer angles, with a processing time suitable for rapid design purposes. JeNo models the noise from hot jets as a combination of two types of noise sources; quadrupole sources dependent on velocity fluctuations, which represent the major noise of turbulent mixing, and dipole sources dependent on enthalpy fluctuations, which represent the effects of thermal variation. These two sources are modeled by JeNo as propagating independently into the far-field, with no cross-correlation at the observer location. However, high-fidelity computational fluid dynamics solutions demonstrate that this assumption is false. In this thesis, the theory, assumptions, and limitations of the JeNo code are briefly discussed, and a modification to the acoustic analogy method is proposed in which the cross-correlation of the two primary noise sources is allowed to vary with the speed of the jet and the observer location. As a proof-of-concept implementation, an empirical correlation correction function is derived from comparisons between JeNo's noise predictions and a set of experimental measurements taken for the Air Force Aero-Propulsion Laboratory. The empirical correlation correction is then applied to JeNo's predictions of a separate data set of hot jets tested at NASA's Glenn Research Center. Metrics are derived to measure the qualitative and quantitative performance of JeNo's acoustic predictions, and the empirical correction is shown to provide a quantitative improvement in the noise prediction at low observer angles with no freestream flow, and a qualitative improvement in the presence of freestream flow. However, the results also demonstrate that there are underlying flaws in JeNo's ability to predict the behavior of a hot jet's acoustic signature at certain rear observer angles, and that this correlation correction is not able to correct these flaws.

Fourier plane modeling of the jet in the galaxy M81

NASA Astrophysics Data System (ADS)

Ramessur, Arvind; Bietenholz, Michael F.; Leeuw, Lerothodi L.; Bartel, Norbert

2015-03-01

The nearby spiral galaxy M81 has a low-luminosity Active Galactic Nucleus in its center with a core and a one-sided curved jet, dubbed M81*, that is barely resolved with VLBI. To derive basic parameters such as the length of the jet, its orientation and curvature, the usual method of model-fitting with point sources and elliptical Gaussians may not always be the most appropriate one. We are developing Fourier-plane models for such sources, in particular an asymmetric triangle model to fit the extensive set of VLBI data of M81* in the u-v plane. This method may have an advantage over conventional ones in extracting information close to the resolution limit to provide us with a more comprehensive picture of the structure and evolution of the jet. We report on preliminary results.

Fermi Non-detections of Four X-Ray Jet Sources and Implications for the IC/CMB Mechanism

NASA Astrophysics Data System (ADS)

Breiding, Peter; Meyer, Eileen T.; Georganopoulos, Markos; Keenan, M. E.; DeNigris, N. S.; Hewitt, Jennifer

2017-11-01

Since its launch in 1999, the Chandra X-ray observatory has discovered several dozen X-ray jets associated with powerful quasars. In many cases, the X-ray spectrum is hard and appears to come from a second spectral component. The most popular explanation for the kpc-scale X-ray emission in these cases has been inverse-Compton (IC) scattering of Cosmic Microwave Background (CMB) photons by relativistic electrons in the jet (the IC/CMB model). Requiring the IC/CMB emission to reproduce the observed X-ray flux density inevitably predicts a high level of gamma-ray emission, which should be detectable with the Fermi Large Area Telescope (LAT). In previous work, we found that gamma-ray upper limits from the large-scale jets of 3C 273 and PKS 0637-752 violate the predictions of the IC/CMB model. Here, we present Fermi/LAT flux density upper limits for the X-ray jets of four additional sources: PKS 1136-135, PKS 1229-021, PKS 1354+195, and PKS 2209+080. We show that these limits violate the IC/CMB predictions at a very high significance level. We also present new Hubble Space Telescope observations of the quasar PKS 2209+080 showing a newly detected optical jet, and Atacama Large Millimeter/submillimeter Array band 3 and 6 observations of all four sources, which provide key constraints on the spectral shape that enable us to rule out the IC/CMB model.

Underwater noise of small personal watercraft (jet skis).

PubMed

Erbe, Christine

2013-04-01

Personal watercraft (water scooters, jet skis) were recorded under water in Bramble Bay, Queensland, Australia. Underwater noise emissions consisted of broadband energy between 100 Hz and 10 kHz due to the vibrating bubble cloud generated by the jet stream, overlain with frequency-modulated tonals corresponding to impeller blade rates and harmonics. Broadband monopole source levels were 149, 137, and 122 dB re 1 μPa @ 1 m (5th, 50th, and 95th percentiles). Even though these are lower than those of small propeller-driven boats, it is not necessarily the broadband source level that correlates with the bioacoustic impact on marine fauna.

Analysis of an entrainment model of the jet in a crossflow

NASA Technical Reports Server (NTRS)

Chang, H. S.; Werner, J. E.

1972-01-01

A theoretical model has been proposed for the problem of a round jet in an incompressible cross-flow. The method of matched asymptotic expansions has been applied to this problem. For the solution to the flow problem in the inner region, the re-entrant wake flow model was used with the re-entrant flow representing the fluid entrained by the jet. Higher order corrections are obtained in terms of this basic solution. The perturbation terms in the outer region was found to be a line distribution of doublets and sources. The line distribution of sources represents the combined effect of the entrainment and the displacement.

RAiSE III: 3C radio AGN energetics and composition

NASA Astrophysics Data System (ADS)

Turner, Ross J.; Shabala, Stanislav S.; Krause, Martin G. H.

2018-03-01

Kinetic jet power estimates based exclusively on observed monochromatic radio luminosities are highly uncertain due to confounding variables and a lack of knowledge about some aspects of the physics of active galactic nuclei (AGNs). We propose a new methodology to calculate the jet powers of the largest, most powerful radio sources based on combinations of their size, lobe luminosity, and shape of their radio spectrum; this approach avoids the uncertainties encountered by previous relationships. The outputs of our model are calibrated using hydrodynamical simulations and tested against independent X-ray inverse-Compton measurements. The jet powers and lobe magnetic field strengths of radio sources are found to be recovered using solely the lobe luminosity and spectral curvature, enabling the intrinsic properties of unresolved high-redshift sources to be inferred. By contrast, the radio source ages cannot be estimated without knowledge of the lobe volumes. The monochromatic lobe luminosity alone is incapable of accurately estimating the jet power or source age without knowledge of the lobe magnetic field strength and size, respectively. We find that, on average, the lobes of the Third Cambridge Catalogue of Radio Sources (3C) have magnetic field strengths approximately a factor three lower than the equipartition value, inconsistent with equal energy in the particles and the fields at the 5σ level. The particle content of 3C radio lobes is discussed in the context of complementary observations; we do not find evidence favouring an energetically dominant proton population.

High-energy neutrinos from FR0 radio galaxies?

NASA Astrophysics Data System (ADS)

Tavecchio, F.; Righi, C.; Capetti, A.; Grandi, P.; Ghisellini, G.

2018-04-01

The sources responsible for the emission of high-energy (≳100 TeV) neutrinos detected by IceCube are still unknown. Among the possible candidates, active galactic nuclei with relativistic jets are often examined, since the outflowing plasma seems to offer the ideal environment to accelerate the required parent high-energy cosmic rays. The non-detection of single-point sources or - almost equivalently - the absence, in the IceCube events, of multiplets originating from the same sky position - constrains the cosmic density and the neutrino output of these sources, pointing to a numerous population of faint sources. Here we explore the possibility that FR0 radio galaxies, the population of compact sources recently identified in large radio and optical surveys and representing the bulk of radio-loud AGN population, can represent suitable candidates for neutrino emission. Modelling the spectral energy distribution of an FR0 radio galaxy recently associated with a γ-ray source detected by the Large Area Telescope onboard Fermi, we derive the physical parameters of its jet, in particular the power carried by it. We consider the possible mechanisms of neutrino production, concluding that pγ reactions in the jet between protons and ambient radiation is too inefficient to sustain the required output. We propose an alternative scenario, in which protons, accelerated in the jet, escape from it and diffuse in the host galaxy, producing neutrinos as a result of pp scattering with the interstellar gas, in strict analogy with the processes taking place in star-forming galaxies.

Some Problems of Exploitation of Jet Turbine Aircraft Engines of Lot Polish Air Lines,

DTIC Science & Technology

1977-04-26

CI ‘AD~AOII6 221 FOREIGN TECHNOLOGY DIV WR IGHT—PATTERSON AFB OHIO F/I 21/5SOME PROBLEMS OF EXPLOITATION OF JET TURBINE AIRCRAFT ENGINES O—CTC(U...EXPLOITATION OF JET TURBINE AIRCRAFT ENGINES OF LOT POLISH AIR LINE S By: Andrzej Slodownik English pages: 1~ Source: Technika Lotnicza I Astronautyczna...SOME PROBLEMS OF EXPLOITATION OF JET TURBINE AIRCRAFT ENGINES OF LOT POLISH AIR LINES Andrzej Slodownik , M. Eng . FTD— ID ( RS) I— 0 1475 — 77 I

Neutron streaming studies along JET shielding penetrations

NASA Astrophysics Data System (ADS)

Stamatelatos, Ion E.; Vasilopoulou, Theodora; Batistoni, Paola; Obryk, Barbara; Popovichev, Sergey; Naish, Jonathan

2017-09-01

Neutronic benchmark experiments are carried out at JET aiming to assess the neutronic codes and data used in ITER analysis. Among other activities, experiments are performed in order to validate neutron streaming simulations along long penetrations in the JET shielding configuration. In this work, neutron streaming calculations along the JET personnel entrance maze are presented. Simulations were performed using the MCNP code for Deuterium-Deuterium and Deuterium- Tritium plasma sources. The results of the simulations were compared against experimental data obtained using thermoluminescence detectors and activation foils.

The Gamma-Ray Observatory: An overview

NASA Technical Reports Server (NTRS)

Kniffen, Donald A.

1989-01-01

The Gamma-Ray Observatory (GRO) is a 16,000 kg spacecraft containing four instruments which span almost six decades of energy from about 50 keV to about 30 GeV. It will provide the first opportunity to make simultaneous observations over such a broad band of gamma-ray energies. GRO is assembled and undergoing testing prior to its scheduled June 4, 1990 launch aboard the Space Shuttle. The orbit will be circular with an altitude of 450 km and with an inclination of 28 degrees. Data will be recorded at 32 kilobits per second and dumped once per orbit via the Tracking and Data Relay Satellite System (TDRSS). The spacecraft is three-axis stabilized and timing will be maintained to .1 ms. The observing schedule will begin with an all sky survey, consisting of 30 two week pointings, covering the first 15 months of science operations. Following observations will emphasize source studies and deep searches. Originally selected as a Principal Class spacecraft with a two year mission, extension of the mission to six to ten years makes a vigorous Guest Investigator Program both possible and desirable. Such a program will be fully in place by the third year of the mission, with limited opportunities earlier. Each of the four instruments has a capability for observing both gamma-ray bursts and solar flare gamma-rays, and there is some solar neutron capability. Correlated observations with those at other wavelengths is also receiving considerable attention in the mission planning.

Compton Gamma-Ray Observatory

NASA Technical Reports Server (NTRS)

1991-01-01

This photograph shows the Compton Gamma-Ray Observatory being released from the Remote Manipulator System (RMS) arm aboard the Space Shuttle Atlantis during the STS-35 mission in April 1991. The GRO reentered the Earth's atmosphere and ended its successful mission in June 2000. For nearly 9 years, GRO's Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center, kept an unblinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts that had puzzled them for decades. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of star, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. In January 1999, the instrument, via the Internet, cued a computer-controlled telescope at Las Alamos National Laboratory in Los Alamos, New Mexico, within 20 seconds of registering a burst. With this capability, the gamma-ray experiment came to serve as a gamma-ray burst alert for the Hubble Space Telescope, the Chandra X-Ray Observatory, and major gound-based observatories around the world. Thirty-seven universities, observatories, and NASA centers in 19 states, and 11 more institutions in Europe and Russia, participated in BATSE's science program.

Space Shuttle Projects

NASA Image and Video Library

1991-04-01

This photograph shows the Compton Gamma-Ray Observatory being released from the Remote Manipulator System (RMS) arm aboard the Space Shuttle Atlantis during the STS-35 mission in April 1991. The GRO reentered the Earth's atmosphere and ended its successful mission in June 2000. For nearly 9 years, GRO's Burst and Transient Source Experiment (BATSE), designed and built by the Marshall Space Flight Center, kept an unblinking watch on the universe to alert scientist to the invisible, mysterious gamma-ray bursts that had puzzled them for decades. By studying gamma-rays from objects like black holes, pulsars, quasars, neutron stars, and other exotic objects, scientists could discover clues to the birth, evolution, and death of star, galaxies, and the universe. The gamma-ray instrument was one of four major science instruments aboard the Compton. It consisted of eight detectors, or modules, located at each corner of the rectangular satellite to simultaneously scan the entire universe for bursts of gamma-rays ranging in duration from fractions of a second to minutes. In January 1999, the instrument, via the Internet, cued a computer-controlled telescope at Las Alamos National Laboratory in Los Alamos, New Mexico, within 20 seconds of registering a burst. With this capability, the gamma-ray experiment came to serve as a gamma-ray burst alert for the Hubble Space Telescope, the Chandra X-Ray Observatory, and major gound-based observatories around the world. Thirty-seven universities, observatories, and NASA centers in 19 states, and 11 more institutions in Europe and Russia, participated in BATSE's science program.

The Jet/Disk Connection in AGN: Chandra and XMM-Newton Observations of Three Powerful Radio-Loud Quasars

NASA Technical Reports Server (NTRS)

Sambruna, Rita; Gliozzi, Mario; Tavecchio, F.; Maraschi, L.; Foschini, Luigi

2007-01-01

The connection between the accretion process that powers AGN and the formation of jets is still poorly understood. Here we tackle this issue using new, deep Chandra and XMM-Newton observations of tlie cores of three powerful radio loud quasars: 1136-135, 1150+497 (Chandra), and 0723+679 (XMM-Newton), in the redshift range z=0.3-0.8. These sources are known from our previous Chandra siiapsliot survey to liave kpc-scale X-ray jets. In 1136-135 and 1150-1+497; evidence is found for the presence of diffuse thermal X-ray emission around the cores; on scales of 40-50 kpc and with luminosity L(sub 0.3-2 kev approx. 10(sup 43) erg per second, suggesting thermal emission from the host galaxy or a galaxy group. The X-ray continua of the cores in the three sources are described by an upward-curved (concave) broken power law, with photon indices GAMMA (sub soft) approx. 1.8 - 2.1 and GAMMA (sub hard) approx. 1.7 below and above approx. equal to 2 keV, respectively. There is evidence for an uiiresolved Fe K alpha line with EW approx. 70 eV in the three quasars. The Spectral Energy Distributions of the sources can be well described by a mix of jet and disk emission, with the jet dominating the radio and hard X-rays (via synchrotron and external Compton) and the disk dominating the optical/UV through soft X-rays. The ratio of the jet-to-disk powers is approx. 1, consistent with those derived for a number of gamma ray emitting blazars. This indicates that near equality of accretion and jet power may be common in powerful radio-loud AGN.

Multi-Epoch 8.4GHz VLBI Observations of the Nucleus of Centaurus A

NASA Technical Reports Server (NTRS)

Meier, David L.

1992-01-01

We present the results of several 8.4 GHz VLBI observations of the nucleus of Centaurus A. We fing that the source possesses a classical core-jet structure with the inner portion of the jet expanding at a proper motion of 4.o mas yr or an apparet velocity of 0.26c along the jet.

High Velocity Jet Noise Source Location and Reduction. Task 4. Development/Evaluation of Techniques for ’Inflight’ Investigation.

DTIC Science & Technology

1977-02-22

included. Acoustic results from the Learjet and NASA-Lewis F-106 Aircraft Flyovers and the French Aerotrain Tests, taken with a baseline, 8-lobe, and 104...between aerotrain data and transformed free jet data are presented for three primary jet velocities and two flight velocities for the three nozzle types.

Collective Evidence for Inverse Compton Emission from External Photons in High-Power Blazars

NASA Technical Reports Server (NTRS)

Meyer, Eileen T.; Fossati, Giovanni; Georganopoulos, Markos; Lister, Matthew L.

2012-01-01

We present the first collective evidence that Fermi-detected jets of high kinetic power (L(sub kin)) are dominated by inverse Compton emission from upscattered external photons. Using a sample with a broad range in orientation angle, including radio galaxies and blazars, we find that very high power sources (L(sub kin) > 10(exp 45.5) erg/s) show a significant increase in the ratio of inverse Compton to synchrotron power (Compton dominance) with decreasing orientation angle, as measured by the radio core dominance and confirmed by the distribution of superluminal speeds. This increase is consistent with beaming expectations for external Compton (EC) emission, but not for synchrotron self Compton (SSC) emission. For the lowest power jets (L(sub kin) < 10(exp 43.5) erg /s), no trend between Compton and radio core dominance is found, consistent with SSC. Importantly, the EC trend is not seen for moderately high power flat spectrum radio quasars with strong external photon fields. Coupled with the evidence that jet power is linked to the jet speed, this finding suggests that external photon fields become the dominant source of seed photons in the jet comoving frame only for the faster and therefore more powerful jets.

Seismic Noise Analysis and Reduction through Utilization of Collocated Seismic and Atmospheric Sensors at the GRO Chile Seismic Network

NASA Astrophysics Data System (ADS)

Farrell, M. E.; Russo, R. M.

2013-12-01

The installation of Earthscope Transportable Array-style geophysical observatories in Chile expands open data seismic recording capabilities in the southern hemisphere by nearly 30%, and has nearly tripled the number of seismic stations providing freely-available data in southern South America. Through the use of collocated seismic and atmospheric sensors at these stations we are able to analyze how local atmospheric conditions generate seismic noise, which can degrade data in seismic frequency bands at stations in the ';roaring forties' (S latitudes). Seismic vaults that are climate-controlled and insulated from the local environment are now employed throughout the world in an attempt to isolate seismometers from as many noise sources as possible. However, this is an expensive solution that is neither practical nor possible for all seismic deployments; and also, the increasing number and scope of temporary seismic deployments has resulted in the collection and archiving of terabytes of seismic data that is affected to some degree by natural seismic noise sources such as wind and atmospheric pressure changes. Changing air pressure can result in a depression and subsequent rebound of Earth's surface - which generates low frequency noise in seismic frequency bands - and even moderate winds can apply enough force to ground-coupled structures or to the surface above the seismometers themselves, resulting in significant noise. The 10 stations of the permanent Geophysical Reporting Observatories (GRO Chile), jointly installed during 2011-12 by IRIS and the Chilean Servicio Sismológico, include instrumentation in addition to the standard three seismic components. These stations, spaced approximately 300 km apart along the length of the country, continuously record a variety of atmospheric data including infrasound, air pressure, wind speed, and wind direction. The collocated seismic and atmospheric sensors at each station allow us to analyze both datasets together, to gain insight into how local atmospheric conditions couple with the ground to generate seismic noise, and to explore strategies for reducing this noise post data collection. Comparison of spectra of atmospheric data streams to the three broadband seismic channels for continuous signals recorded during May and June of 2013 shows high coherence between infrasound signals and time variation of air pressure (dP/dt) that we calculated from the air pressure data stream. Coherence between these signals is greatest for the east-west component of the seismic data in northern Chile. Although coherence between seismic, infrasound, and dP/dt is lower for all three seismic channels at other GRO Chile stations, for some of the data streams coherence can jump as much as 6 fold for certain frequency bands, with a common 3-fold increase for periods shorter than 10 seconds and the occasional 6-fold increase at long or very long periods.

Size limits the formation of liquid jets during bubble bursting

PubMed Central

Lee, Ji San; Weon, Byung Mook; Park, Su Ji; Je, Jung Ho; Fezzaa, Kamel; Lee, Wah-Keat

2011-01-01

A bubble reaching an air–liquid interface usually bursts and forms a liquid jet. Jetting is relevant to climate and health as it is a source of aerosol droplets from breaking waves. Jetting has been observed for large bubbles with radii of R≫100 μm. However, few studies have been devoted to small bubbles (R<100 μm) despite the entrainment of a large number of such bubbles in sea water. Here we show that jet formation is inhibited by bubble size; a jet is not formed during bursting for bubbles smaller than a critical size. Using ultrafast X-ray and optical imaging methods, we build a phase diagram for jetting and the absence of jetting. Our results demonstrate that jetting in bubble bursting is analogous to pinching-off in liquid coalescence. The coalescence mechanism for bubble bursting may be useful in preventing jet formation in industry and improving climate models concerning aerosol production. PMID:21694715

Capillary plasma jet: A low volume plasma source for life science applications

NASA Astrophysics Data System (ADS)

Topala, I.; Nagatsu, M.

2015-02-01

In this letter, we present results from multispectroscopic analysis of protein films, after exposure to a peculiar plasma source, i.e., the capillary plasma jet. This plasma source is able to generate very small pulsed plasma volumes, in kilohertz range, with characteristic dimensions smaller than 1 mm. This leads to specific microscale generation and transport of all plasma species. Plasma diagnosis was realized using general electrical and optical methods. Depending on power level and exposure duration, this miniature plasma jet can induce controllable modifications to soft matter targets. Detailed discussions on protein film oxidation and chemical etching are supported by results from absorption, X-ray photoelectron spectroscopy, and microscopy techniques. Further exploitation of principles presented here may consolidate research interests involving plasmas in biotechnologies and plasma medicine, especially in patterning technologies, modified biomolecule arrays, and local chemical functionalization.

Control of jet noise

NASA Technical Reports Server (NTRS)

Schreck, Stefan

1993-01-01

This reports describes experiments conducted at the High-Speed Jet Facility at the University of Southern California on supersonic jets. The goal of the study was to develop methods for controlling the noise emitted from supersonic jets by passive and/or active means. Work by Seiner et al (1991) indicates that eddy Mach wave radiation is the dominant noise source in a heated high speed jet. Eddy Mach radiation is caused by turbulent eddies traveling at supersonic speed in the shear layer of the jet. The convection velocity of the eddies decays with increasing distance from the nozzle exit due to the mixing of the jet stream with the ambient fluid. Once the convection speed reaches subsonic velocities, eddy Mach wave radiation ceases. To control noise, a rapid decay of the convection velocity is desired. This may be accomplished by enhanced mixing in the jet. In this study, small aspect ratio rectangular jet nozzles were tested. A flapping mode was noticed in the jets. By amplifying screech components of the jets and destabilizing the jet columns with a collar device, the flapping mode was excited. The result was a rapid decay of the jet velocity. A reduction in eddy Mach radiation in rectangular supersonic jets may be achieved with this device.

Properties of the Propagating Oscillatory Shock Wave in the Accretion Flows around Few Transient Black Hole Candidates during Their Outbursts

NASA Astrophysics Data System (ADS)

Debnath, Dipak; Chakrabarti, Sandip. K.

2015-01-01

In our study of the timing properties of few Galactic black hole candidates evolutions of the low and intermediate frequency quasi-periodic oscillations (LIFQPOs) are observed. In 2005, for explaining evolution of QPO frequency during rising phase of 2005 GRO J1655-40 outburst, Chakrabarti and his students introduced a new model, namely propagating oscillatory shock (POS) model. Here we present the results obtained from the same POS model fitted QPO evolutions during both the rising and declining phases of the outbursts of 2005 GRO J165540, 2010-11 GX 339-4, and 2010 & 2011 H 1743-322.

Analyse der Literatur zu Klimawirkungen in Deutschland: ein Gesamtbild mit Lücken

NASA Astrophysics Data System (ADS)

Fleischhauer, Mark; Greiving, Stefan; Lindner, Christian; Lückenkötter, Johannes; Schauser, Inke

Dieses Kapitel präsentiert Ergebnisse einer umfassenden Literaturauswertung zu relevanten Klimawirkungen für Deutschland, die im Rahmen des Projekts "Netzwerk Vulnerabilität" vorgenommen wurde. Es zeigt auf, dass ein aggregiertes Gesamtbild der Klimawirkungen für Deutschland als Grundlage für Folgenabschätzungen und Anpassungsplanungen noch nicht gezeichnet werden kann, da eine große Bandbreite an Ansätzen zur Bewertung von Vulnerabilitäten oder Klimawandelfolgen existiert und die gegenwärtig vorhandenen Klimawirkungs- und Vulnerabilitätsstudien von großer Heterogenität gekennzeichnet sind. Als erster Schritt wird deshalb eine Zusammenschau bereits vorhandener Ansätze geliefert.

[Leben im Eismeer - Tauchuntersuchungen zur Biologie arktischer Meerespflanzen und Meerestiere

PubMed

Lippert; Karsten; Wiencke

2000-01-01

Die Maske wird nochmals auf Dichtigkeit überprüft, der Knoten der Sicherungsleine mit zwei halben Schlägen fixiert, dann rutscht die Taucherin von der Eiskante in das kalte Wasser. Eine halbe Stunde vergeht, bevor ihr Kopf wieder aus dem Eisloch auftaucht und sie ein großes Sammelnetz nach oben reicht, gefüllt mit verschiedenen Arten von Makroalgen. Obwohl noch große Flächen des Kongsfjordes im arktischen Spitzbergen zugefroren sind und das Festland von einer dicken Schneedecke bedeckt ist, hat unter Wasser in den Algenwäldern bereits der Sommer und damit die Saison der Meeresbiologen begonnen.

Der Einfluss der Digitalisierung auf die Organisation eines Unternehmens

NASA Astrophysics Data System (ADS)

Walter, Wolfram M.

Die Digitalisierung schreitet mit großen Schritten voran. Dies wirkt sich nicht nur auf die Gesellschaft im Grundsatz, sondern auch auf das Verhalten der Kunden aus. Neue Kommunikationswege beschleunigen die Interaktion zwischen Unternehmen und Verbraucher. Im Vergleich mit großen Internetfirmen werden etablierte Dienstleistungsunternehmen - vom Energieversorger bis zu Versicherungen - stark unter Druck gesetzt, sich noch intensiver mit dem Kundenservice auseinanderzusetzen. Dies wird nur möglich sein, wenn sich die Organisationen entsprechend positionieren und sich frühzeitig auf die Veränderungen einstellen. Hieraus ergeben sich mehr Chancen als Risiken, zumal es nicht nur neue Prozesse, sondern auch neue Berufsbilder geben wird.

In vitro pore-forming activity of the lantibiotic nisin. Role of protonmotive force and lipid composition.

PubMed

Garcerá, M J; Elferink, M G; Driessen, A J; Konings, W N

1993-03-01

Nisin is a lantibiotic produced by some strains of Lactococcus lactis subsp. lactis. The target for nisin action is the cytoplasmic membrane of Gram-positive bacteria. Nisin dissipates the membrane potential (delta psi) and induces efflux of low-molecular-mass compounds. Evidence has been presented that a delta psi is needed for nisin action. The in vitro action of nisin was studied on liposomes loaded with the fluorophore carboxyfluorescein. Nisin-induced efflux of carboxyfluorescein was observed in the absence of a delta psi from liposomes composed of Escherichia coli lipids or dioleoylglycerophosphocholine (Ole2GroPCho) at low nisin/lipid ratios. The initial rate of carboxyfluorescein efflux is dependent on the nisin/lipid ratio and saturates at high ratios. Both delta psi (inside negative) and delta pH (inside alkaline) enhance the action of nisin, while nisin is more potent at acidic external pH values. Efficient carboxyfluorescein efflux is observed with the zwitterionic phospholipid Ole2GroPCho or mixtures of Ole2GroPCho with dioleoylglycerophosphoethanolamine and neutral glycolipids, while anionic phospholipids are strongly inhibitory. It is concluded that a delta psi is not essential, but that the total protonmotive force stimulates the action of nisin.

Genome-Wide Mapping of Furfural Tolerance Genes in Escherichia coli

PubMed Central

Glebes, Tirzah Y.; Sandoval, Nicholas R.; Reeder, Philippa J.; Schilling, Katherine D.; Zhang, Min; Gill, Ryan T.

2014-01-01

Advances in genomics have improved the ability to map complex genotype-to-phenotype relationships, like those required for engineering chemical tolerance. Here, we have applied the multiSCale Analysis of Library Enrichments (SCALEs; Lynch et al. (2007) Nat. Method.) approach to map, in parallel, the effect of increased dosage for >105 different fragments of the Escherichia coli genome onto furfural tolerance (furfural is a key toxin of lignocellulosic hydrolysate). Only 268 of >4,000 E. coli genes (∼6%) were enriched after growth selections in the presence of furfural. Several of the enriched genes were cloned and tested individually for their effect on furfural tolerance. Overexpression of thyA, lpcA, or groESL individually increased growth in the presence of furfural. Overexpression of lpcA, but not groESL or thyA, resulted in increased furfural reduction rate, a previously identified mechanism underlying furfural tolerance. We additionally show that plasmid-based expression of functional LpcA or GroESL is required to confer furfural tolerance. This study identifies new furfural tolerant genes, which can be applied in future strain design efforts focused on the production of fuels and chemicals from lignocellulosic hydrolysate. PMID:24489935

Genome-wide mapping of furfural tolerance genes in Escherichia coli.

PubMed

Glebes, Tirzah Y; Sandoval, Nicholas R; Reeder, Philippa J; Schilling, Katherine D; Zhang, Min; Gill, Ryan T

2014-01-01

Advances in genomics have improved the ability to map complex genotype-to-phenotype relationships, like those required for engineering chemical tolerance. Here, we have applied the multiSCale Analysis of Library Enrichments (SCALEs; Lynch et al. (2007) Nat. Method.) approach to map, in parallel, the effect of increased dosage for >10(5) different fragments of the Escherichia coli genome onto furfural tolerance (furfural is a key toxin of lignocellulosic hydrolysate). Only 268 of >4,000 E. coli genes (∼ 6%) were enriched after growth selections in the presence of furfural. Several of the enriched genes were cloned and tested individually for their effect on furfural tolerance. Overexpression of thyA, lpcA, or groESL individually increased growth in the presence of furfural. Overexpression of lpcA, but not groESL or thyA, resulted in increased furfural reduction rate, a previously identified mechanism underlying furfural tolerance. We additionally show that plasmid-based expression of functional LpcA or GroESL is required to confer furfural tolerance. This study identifies new furfural tolerant genes, which can be applied in future strain design efforts focused on the production of fuels and chemicals from lignocellulosic hydrolysate.

Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology

PubMed Central

Marine, Rachel L; Nasko, Daniel J; Wray, Jeffrey; Polson, Shawn W; Wommack, K Eric

2017-01-01

Chaperonins are protein-folding machinery found in all cellular life. Chaperonin genes have been documented within a few viruses, yet, surprisingly, analysis of metagenome sequence data indicated that chaperonin-carrying viruses are common and geographically widespread in marine ecosystems. Also unexpected was the discovery of viral chaperonin sequences related to thermosome proteins of archaea, indicating the presence of virioplankton populations infecting marine archaeal hosts. Virioplankton large subunit chaperonin sequences (GroELs) were divergent from bacterial sequences, indicating that viruses have carried this gene over long evolutionary time. Analysis of viral metagenome contigs indicated that: the order of large and small subunit genes was linked to the phylogeny of GroEL; both lytic and temperate phages may carry group I chaperonin genes; and viruses carrying a GroEL gene likely have large double-stranded DNA (dsDNA) genomes (>70 kb). Given these connections, it is likely that chaperonins are critical to the biology and ecology of virioplankton populations that carry these genes. Moreover, these discoveries raise the intriguing possibility that viral chaperonins may more broadly alter the structure and function of viral and cellular proteins in infected host cells. PMID:28731469

Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology.

PubMed

Marine, Rachel L; Nasko, Daniel J; Wray, Jeffrey; Polson, Shawn W; Wommack, K Eric

2017-11-01

Chaperonins are protein-folding machinery found in all cellular life. Chaperonin genes have been documented within a few viruses, yet, surprisingly, analysis of metagenome sequence data indicated that chaperonin-carrying viruses are common and geographically widespread in marine ecosystems. Also unexpected was the discovery of viral chaperonin sequences related to thermosome proteins of archaea, indicating the presence of virioplankton populations infecting marine archaeal hosts. Virioplankton large subunit chaperonin sequences (GroELs) were divergent from bacterial sequences, indicating that viruses have carried this gene over long evolutionary time. Analysis of viral metagenome contigs indicated that: the order of large and small subunit genes was linked to the phylogeny of GroEL; both lytic and temperate phages may carry group I chaperonin genes; and viruses carrying a GroEL gene likely have large double-stranded DNA (dsDNA) genomes (>70 kb). Given these connections, it is likely that chaperonins are critical to the biology and ecology of virioplankton populations that carry these genes. Moreover, these discoveries raise the intriguing possibility that viral chaperonins may more broadly alter the structure and function of viral and cellular proteins in infected host cells.

Conformational Sampling and Nucleotide-Dependent Transitions of the GroEL Subunit Probed by Unbiased Molecular Dynamics Simulations

PubMed Central

Skjaerven, Lars; Grant, Barry; Muga, Arturo; Teigen, Knut; McCammon, J. Andrew; Reuter, Nathalie; Martinez, Aurora

2011-01-01

GroEL is an ATP dependent molecular chaperone that promotes the folding of a large number of substrate proteins in E. coli. Large-scale conformational transitions occurring during the reaction cycle have been characterized from extensive crystallographic studies. However, the link between the observed conformations and the mechanisms involved in the allosteric response to ATP and the nucleotide-driven reaction cycle are not completely established. Here we describe extensive (in total long) unbiased molecular dynamics (MD) simulations that probe the response of GroEL subunits to ATP binding. We observe nucleotide dependent conformational transitions, and show with multiple 100 ns long simulations that the ligand-induced shift in the conformational populations are intrinsically coded in the structure-dynamics relationship of the protein subunit. Thus, these simulations reveal a stabilization of the equatorial domain upon nucleotide binding and a concomitant “opening” of the subunit, which reaches a conformation close to that observed in the crystal structure of the subunits within the ADP-bound oligomer. Moreover, we identify changes in a set of unique intrasubunit interactions potentially important for the conformational transition. PMID:21423709

Cyclic stretch augments production of neutrophil chemokines and matrix metalloproteinase-1 in human uterine smooth muscle cells.

PubMed

Zhao, Yin; Koga, Kaori; Osuga, Yutaka; Izumi, Gentaro; Takamura, Masashi; Harada, Miyuki; Hirata, Tetsuya; Hirota, Yasushi; Yoshino, Osamu; Fujii, Tomoyuki; Kozuma, Shiro

2013-03-01

The aim of this study was to investigate the impact of uterine contraction on the immune environment within the uterus during parturition. Uterine smooth muscle cells (USMC) were isolated from uterine myometrial tissues and cultured. The effects of cyclic stretch on mRNA and/or protein expression of IL-8, Groα, and pro-MMP-1 by USMC were measured using RT-PCR and ELISA. Neutrophil chemotactic activity in conditioned media was evaluated using migration assays. To evaluate the effect of progesterone (P(4) ), USMC were pretreated with P(4) for 24 hr. Cyclic stretch increased IL-8 and Groα mRNA and protein and pro-MMP-1 production significantly. Supernatants from stretched cells induced neutrophil chemotactic activity significantly; these effects were abrogated by anti-IL-8 or Groα neutralizing antibodies. Stretch effects were reduced by P(4) . These results suggest that uterine contraction may induce neutrophil infiltration and MMP-1 production, which may contribute to cervical ripening and rupture of membrane. The inhibitory effects of P(4) may explain the mechanism by which progestin prevents preterm labor. © 2012 John Wiley & Sons A/S.

Butyric acid production from lignocellulosic biomass hydrolysates by engineered Clostridium tyrobutyricum overexpressing Class I heat shock protein GroESL.

PubMed

Suo, Yukai; Fu, Hongxin; Ren, Mengmeng; Yang, Xitong; Liao, Zhengping; Wang, Jufang

2018-02-01

Lignocellulosic biomass is the most abundant and renewable substrate for biological fermentation, but the inhibitors present in the lignocellulosic hydrolysates could severely inhibit the cell growth and productivity of industrial strains. This study confirmed that overexpressing of native groESL in Clostridium tyrobutyricum could significantly improve its tolerance to lignocellulosic hydrolysate-derived inhibitors, especially for phenolic compounds. Consequently, ATCC 25755/groESL showed a better performance in butyric acid fermentation with hydrolysates of corn cob, corn straw, rice straw, wheat straw, soybean hull and soybean straw, respectively. When corn straw and rice straw hydrolysates, which showed strong toxicity to C. tyrobutyricum, were used as the substrates, 29.6 g/L and 30.1 g/L butyric acid were obtained in batch fermentation, increased by 26.5% and 19.4% as compared with the wild-type strain, respectively. And more importantly, the butyric acid productivity reached 0.31 g/L·h (vs. 0.20-0.21 g/L·h for the wild-type strain) due to the shortened lag phase. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Mochi LabJet Experiment for Measurements of Canonical Helicity Injection in a Laboratory Astrophysical Jet

NASA Astrophysics Data System (ADS)

You, Setthivoine; von der Linden, Jens; Sander Lavine, Eric; Carroll, Evan Grant; Card, Alexander; Quinley, Morgan; Azuara-Rosales, Manuel

2018-06-01

The Mochi device is a new pulsed power plasma experiment designed to produce long, collimated, stable, magnetized plasma jets when set up in the LabJet configuration. The LabJet configuration aims to simulate an astrophysical jet in the laboratory by mimicking an accretion disk threaded by a poloidal magnetic field with concentric planar electrodes in front of a solenoidal coil. The unique setup consists of three electrodes, each with azimuthally symmetric gas slits. Two of the electrodes are biased independently with respect to the third electrode to control the radial electric field profile across the poloidal bias magnetic field. This design approximates a shear azimuthal rotation profile in an accretion disk. The azimuthally symmetric gas slits provide a continuously symmetric mass source at the footpoint of the plasma jet, so any azimuthal rotation of the plasma jet is not hindered by a discrete number of gas holes. The initial set of diagnostics consists of current Rogowski coils, voltage probes, magnetic field probe arrays, an interferometer and ion Doppler spectroscopy, supplemented by a fast ion gauge and a retarding grid energy analyzer. The measured parameters of the first plasmas are ∼1022 m‑3, ∼0.4 T, and 5–25 eV, with velocities of ∼20–80 km s‑1. The combination of a controllable electric field profile, a flared poloidal magnetic field, and azimuthally symmetric mass sources in the experiment successfully produces short-lived (∼10 μs, ≳5 Alfvén times) collimated magnetic jets with a ∼10:1 aspect ratio and long-lived (∼100 μs, ≳40 Alfvén times) flow-stabilized, collimated, magnetic jets with a ∼30:1 aspect ratio.

Disc-jet Coupling in the 2009 Outburst of the Black Hole Candidate H1743-322

NASA Technical Reports Server (NTRS)

Miller-Jones, J. C. A.; Sivakoff, G. R.; Altamirano, D.; Coriat, M.; Corbel, S.; Dhawan, V.; Krimm, H. A.; Remillard, R. A.; Rupen, M. P.; Russell, D. M.;

Spectral Energy Distribution Models for Low-Luminosity Active Galactic Nuclei in LINERs

NASA Technical Reports Server (NTRS)

Nemmen, Rodrigo S.; Storchi-Bergmann, Thaisa; Eracleous, Michael

2012-01-01

Low-luminosity active galactic nuclei (LLAGNs) represent the bulk of the AGN population in the present-day universe and they trace the low-level accreting supermassive black holes. In order to probe the accretion and jet physical properties in LLAGNs as a class, we model the broadband radio to X-rays spectral energy distributions (SEDs) of 21 LLAGNs in low-ionization nuclear emission-line regions (LINERs) with a coupled accretion-jet model. The accretion flow is modeled as an inner ADAF outside of which there is a truncated standard thin disk. We find that the radio emission is severely underpredicted by ADAF models and is explained by the relativistic jet. The origin of the X-ray radiation in most sources can be explained by three distinct scenarios: the X-rays can be dominated by emission from the ADAF, or the jet, or the X-rays can arise from a jet-ADAF combination in which both components contribute to the emission with similar importance. For 3 objects both the jet and ADAF fit equally well the X-ray spectrum and can be the dominant source of X-rays whereas for 11 LLAGNs a jet-dominated model accounts better than the ADAF-dominated model for the data. The individual and average SED models that we computed can be useful for different studies of the nuclear emission of LLAGNs. From the model fits, we estimate important parameters of the central engine powering LLAGNs in LINERs, such as the mass accretion rate and the mass-loss rate in the jet and the jet power - relevant for studies of the kinetic feedback from jets.

An Experimental Investigation of the Role of Solid Particles on the Collapse of Explosive Volcanic Plumes

NASA Astrophysics Data System (ADS)

Carazzo, G.; Kaminski, E.; Tait, S.

2007-12-01

Pyroclastic density currents generated by the collapse of an explosive volcanic plume represent the most dangerous flows associated with such eruptions. The study of the mechanical processes leading to column collapse is therefore at the heart of current investigations. Fluid dynamic models show that the behavior of a volcanic jet is mainly controlled by the efficiency with which it entrains and heats atmospheric air. The volcanic mixture initially denser than the atmosphere can thus become buoyant if both processes are effective. The complex role of the particle load and heat exchange makes it difficult to study their effect on the jet dynamics other than by sophisticated numerical simulations. Nevertheless to develop an alternative approach, we present an experimental study in which a turbulent 2-phase jet of hot gas and hot particles is propelled into a large chamber of cold air. The jet is initially driven by momentum and naturally collapses, but if the mixing with the surrounding environment is sufficient the buoyancy can reverse to drive a convective plume. We focus on the influence of source particle concentration and source gas velocity on the threshold between the convective and the collapsing regimes. In the range of the source conditions investigated the jet mostly separated into a po sitively buoyant part and a denser collapsing part. We quantify the fraction of the jet collapsed by collecting the particles and we show that the degree of jet collapse is mainly controlled by the initial amount of particles. A 1D model of turbulent jets accounting for the effect of the reversing buoyancy on the turbulent entrainment, the aggregation, the sedimentation and the recycling of particles is presented. The model is found in good agreement with the data. Further work is necessary to understand the fundamental physics behind the semi-empirical parametrization of re-entrainment and aggregation processes.

Lighting system with heat distribution face plate

DOEpatents

Arik, Mehmet; Weaver, Stanton Earl; Stecher, Thomas Elliot; Kuenzler, Glenn Howard; Wolfe, Jr., Charles Franklin; Li, Ri

2013-09-10

Lighting systems having a light source and a thermal management system are provided. The thermal management system includes synthetic jet devices, a heat sink and a heat distribution face plate. The synthetic jet devices are arranged in parallel to one and other and are configured to actively cool the lighting system. The heat distribution face plate is configured to radially transfer heat from the light source into the ambient air.

Radio emission from an ultraluminous x-ray source.

PubMed

Kaaret, Philip; Corbel, Stephane; Prestwich, Andrea H; Zezas, Andreas

2003-01-17

The physical nature of ultraluminous x-ray sources is uncertain. Stellar-mass black holes with beamed radiation and intermediate black holes with isotropic radiation are two plausible explanations. We discovered radio emission from an ultraluminous x-ray source in the dwarf irregular galaxy NGC 5408. The x-ray, radio, and optical fluxes as well as the x-ray spectral shape are consistent with beamed relativistic jet emission from an accreting stellar black hole. If confirmed, this would suggest that the ultraluminous x-ray sources may be stellar-mass rather than intermediate-mass black holes. However, interpretation of the source as a jet-producing intermediate-mass black hole cannot be ruled out at this time.

Phased Array Noise Source Localization Measurements of an F404 Nozzle Plume at Both Full and Model Scale

NASA Technical Reports Server (NTRS)

Podboy, Gary G.; Bridges, James E.; Henderson, Brenda S.

2010-01-01

A 48-microphone planar phased array system was used to acquire jet noise source localization data on both a full-scale F404-GE-F400 engine and on a 1/4th scale model of a F400 series nozzle. The full-scale engine test data show the location of the dominant noise sources in the jet plume as a function of frequency for the engine in both baseline (no chevron) and chevron configurations. Data are presented for the engine operating both with and without afterburners. Based on lessons learned during this test, a set of recommendations are provided regarding how the phased array measurement system could be modified in order to obtain more useful acoustic source localization data on high-performance military engines in the future. The data obtained on the 1/4th scale F400 series nozzle provide useful insights regarding the full-scale engine jet noise source mechanisms, and document some of the differences associated with testing at model-scale versus fullscale.

Minifilament Eruption as the Source of a Blowout Jet, C-class Flare, and Type-III Radio Burst

NASA Astrophysics Data System (ADS)

Hong, Junchao; Jiang, Yunchun; Yang, Jiayan; Li, Haidong; Xu, Zhe

2017-01-01

We report a strong minifilament eruption associated with Geostationary Operational Environmental Satellite C1.6 flare and WIND type-III radio burst. The minifilament, which lies at the periphery of active region 12259, is detected by Hα images from the New Vacuum Solar Telescope. The minifilament undergoes a partial and then a full eruption. Simultaneously, two co-spatial jets are successively observed in extreme ultraviolet images from the Solar Dynamic Observatory. The first jet exhibits a typical fan-spine geometry, suggesting that the co-spatial minifilament is possibly embedded in magnetic fields with a fan-spine structure. However, the second jet displays blowout morphology when the entire minifilament erupts upward, leaving behind a hard X-ray emission source in the base. Differential emission measure analyses show that the eruptive region is heated up to about 4 MK during the fan-spine jet, while up to about 7 MK during the blowout jet. In particular, the blowout jet is accompanied by an interplanetary type-III radio burst observed by WIND/WAVES in the frequency range from above 10 to 0.1 MHz. Hence, the minifilament eruption is correlated with the interplanetary type-III radio burst for the first time. These results not only suggest that coronal jets can result from magnetic reconnection initiated by erupting minifilaments with open fields, but also shed light on the potential influence of minifilament eruption on interplanetary space.

MINIFILAMENT ERUPTION AS THE SOURCE OF A BLOWOUT JET, C-CLASS FLARE, AND TYPE-III RADIO BURST

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hong, Junchao; Jiang, Yunchun; Yang, Jiayan

We report a strong minifilament eruption associated with Geostationary Operational Environmental Satellite C1.6 flare and WIND type-III radio burst. The minifilament, which lies at the periphery of active region 12259, is detected by H α images from the New Vacuum Solar Telescope. The minifilament undergoes a partial and then a full eruption. Simultaneously, two co-spatial jets are successively observed in extreme ultraviolet images from the Solar Dynamic Observatory . The first jet exhibits a typical fan-spine geometry, suggesting that the co-spatial minifilament is possibly embedded in magnetic fields with a fan-spine structure. However, the second jet displays blowout morphology whenmore » the entire minifilament erupts upward, leaving behind a hard X-ray emission source in the base. Differential emission measure analyses show that the eruptive region is heated up to about 4 MK during the fan-spine jet, while up to about 7 MK during the blowout jet. In particular, the blowout jet is accompanied by an interplanetary type-III radio burst observed by WIND /WAVES in the frequency range from above 10 to 0.1 MHz. Hence, the minifilament eruption is correlated with the interplanetary type-III radio burst for the first time. These results not only suggest that coronal jets can result from magnetic reconnection initiated by erupting minifilaments with open fields, but also shed light on the potential influence of minifilament eruption on interplanetary space.« less

A Shock-Refracted Acoustic Wave Model for Screech Amplitude in Supersonic Jets

NASA Technical Reports Server (NTRS)

Kandula, Max

2007-01-01

A physical model is proposed for the estimation of the screech amplitude in underexpanded supersonic jets. The model is based on the hypothesis that the interaction of a plane acoustic wave with stationary shock waves provides amplification of the transmitted acoustic wave upon traversing the shock. Powell's discrete source model for screech incorporating a stationary array of acoustic monopoles is extended to accommodate variable source strength. The proposed model reveals that the acoustic sources are of increasing strength with downstream distance. It is shown that the screech amplitude increases with the fully expanded jet Mach number. Comparisons of predicted screech amplitude with available test data show satisfactory agreement. The effect of variable source strength on the directivity of the fundamental (first harmonic, lowest frequency mode) and the second harmonic (overtone) is found to be unimportant with regard to the principal lobe (main or major lobe) of considerable relative strength, and is appreciable only in the secondary or minor lobes (of relatively weaker strength).

A Shock-Refracted Acoustic Wave Model for the Prediction of Screech Amplitude in Supersonic Jets

NASA Technical Reports Server (NTRS)

Kandula, Max

2007-01-01

A physical model is proposed for the estimation of the screech amplitude in underexpanded supersonic jets. The model is based on the hypothesis that the interaction of a plane acoustic wave with stationary shock waves provides amplification of the transmitted acoustic wave upon traversing the shock. Powell's discrete source model for screech incorporating a stationary array of acoustic monopoles is extended to accommodate variable source strength. The proposed model reveals that the acoustic sources are of increasing strength with downstream distance. It is shown that the screech amplitude increases with the fuiiy expanded jet Mach number. Comparisons of predicted screech amplitude with available test data show satisfactory agreement. The effect of variable source strength on directivity of the fundamental (first harmonic, lowest frequency mode) and the second harmonic (overtone) is found to be unimportant with regard to the principal lobe (main or major lobe) of considerable relative strength, and is appreciable only in the secondary or minor lobes (of relatively weaker strength

Flow cytometer jet monitor system

DOEpatents

Van den Engh, Ger

1997-01-01

A direct jet monitor illuminates the jet of a flow cytometer in a monitor wavelength band which is substantially separate from the substance wavelength band. When a laser is used to cause fluorescence of the substance, it may be appropriate to use an infrared source to illuminate the jet and thus optically monitor the conditions within the jet through a CCD camera or the like. This optical monitoring may be provided to some type of controller or feedback system which automatically changes either the horizontal location of the jet, the point at which droplet separation occurs, or some other condition within the jet in order to maintain optimum conditions. The direct jet monitor may be operated simultaneously with the substance property sensing and analysis system so that continuous monitoring may be achieved without interfering with the substance data gathering and may be configured so as to allow the front of the analysis or free fall area to be unobstructed during processing.

Impact of Air Injection on Jet Noise

NASA Technical Reports Server (NTRS)

Henderson, Brenda; Norum, Tom

2007-01-01

The objective of this viewgraph presentation is to review the program to determine impact of core fluidic chevrons on noise produced by dual stream jets (i.e., broadband shock noise - supersonic, and mixing noise - subsonic and supersonic). The presentation reviews the sources of jet noise. It shows designs of Generation II Fluidic Chevrons. The injection impacts shock structure and stream disturbances through enhanced mixing. This may impact constructive interference between acoustic sources. The high fan pressures may inhibit mixing produced by core injectors. A fan stream injection may be required for better noise reduction. In future the modification of Gen II nozzles to allow for some azimuthal control: will allow for higher mass flow rates and will allow for shallower injection angles A Flow field study is scheduled for spring, 2008 The conclusions are that injection can reduce well-defined shock noise and injection reduces mixing noise near peak jet noise angle

Interplay between Mach cone and radial expansion in jet events

NASA Astrophysics Data System (ADS)

Tachibana, Y.; Hirano, T.

2016-12-01

We study the hydrodynamic response to jet propagation in the expanding QGP and investigate how the particle spectra after the hydrodynamic evolution of the QGP reflect it. We perform simulations of the space-time evolution of the QGP in gamma-jet events by solving (3+1)-dimensional ideal hydrodynamic equations with source terms. Mach cone is induced by the jet energy deposition and pushes back the radial flow of the expanding background. Especially in the case when the jet passage is off-central one, the number of particles emitted in the direction of the push back decreases. This is the signal including the information about the formation of the Mach cone and the jet passage in the QGP fluid.

Improved Phased Array Imaging of a Model Jet

NASA Technical Reports Server (NTRS)

Dougherty, Robert P.; Podboy, Gary G.

2010-01-01

An advanced phased array system, OptiNav Array 48, and a new deconvolution algorithm, TIDY, have been used to make octave band images of supersonic and subsonic jet noise produced by the NASA Glenn Small Hot Jet Acoustic Rig (SHJAR). The results are much more detailed than previous jet noise images. Shock cell structures and the production of screech in an underexpanded supersonic jet are observed directly. Some trends are similar to observations using spherical and elliptic mirrors that partially informed the two-source model of jet noise, but the radial distribution of high frequency noise near the nozzle appears to differ from expectations of this model. The beamforming approach has been validated by agreement between the integrated image results and the conventional microphone data.

Multiwaveband Polarimetric Observations of 15 Active Galactic Nuclei at High Frequencies: Correlated Polarization Behavior

NASA Astrophysics Data System (ADS)

Jorstad, Svetlana G.; Marscher, Alan P.; Stevens, Jason A.; Smith, Paul S.; Forster, James R.; Gear, Walter K.; Cawthorne, Timothy V.; Lister, Matthew L.; Stirling, Alastair M.; Gómez, José L.; Greaves, Jane S.; Robson, E. Ian

2007-08-01

We report on multifrequency linear polarization monitoring of 15 active galactic nuclei containing highly relativistic jets with apparent speeds from ~4c to >40c. The measurements were obtained at optical, 1 mm, and 3 mm wavelengths, and at 7 mm with the Very Long Baseline Array. The data show a wide range in degree of linear polarization among the sources, from <1% to >30%, and interday polarization variability in individual sources. The polarization properties suggest separation of the sample into three groups with low, intermediate, and high variability of polarization in the core at 7 mm (LVP, IVP, and HVP, respectively). The groups are partially associated with the common classification of active galactic nuclei as radio galaxies and quasars with low optical polarization (LVP), BL Lacertae objects (IVP), and highly optically polarized quasars (HVP). Our study investigates correlations between total flux, fractional polarization, and polarization position angle at the different wavelengths. We interpret the polarization properties of the sources in the sample through models in which weak shocks compress turbulent plasma in the jet. The differences in the orientation of sources with respect to the observer, jet kinematics, and abundance of thermal matter external to the jet near the core can account for the diversity in the polarization properties. The results provide strong evidence that the optical polarized emission originates in shocks, most likely situated between the 3 and 7 mm VLBI cores. They also support the idea that the 1 mm core lies at the edge of the transition zone between electromagnetically dominated and turbulent hydrodynamic sections of the jet.

Provenance Changes Over Glacial-Interglacial Timescales Recorded in Japan Sea Sediments (IODP Site U1430)

NASA Astrophysics Data System (ADS)

Kinsley, C. W.; McGee, D.; Anderson, C. H.; Murray, R. W.; Tada, R.; Alvarez Zarikian, C. A.

2017-12-01

Recent work has shown a mechanistic relationship between the Westerly Jet (WJ) and East Asian Monsoon (EAM) precipitation, as migration of the WJ to the northern edge of the Tibetan Plateau during spring and early summer appears to be essential for driving convective rainfall over eastern China. Chiang et al. (2015) has proposed the "Jet Transition Hypothesis" wherein it is put forward that changes to the seasonal meridional position of the WJ relative to the Tibetan Plateau drives rainfall climate changes over East Asia on paleoclimate timescales. This hypothesis would predict that in extreme scenarios such as cold phases of Dansgaard-Oeschger (D-O) stadials and during periods of low Northern Hemisphere summer insolation that the Jet would not move north of the Tibetan Plateau, keeping East Asia in prolonged spring conditions. Conversely, during periods of high Northern Hemisphere summer insolation it would be predicted that the Jet would move more quickly north of the Tibetan Plateau and remain there longer, keeping East Asia in prolonged summer conditions. Westerly Jet behavior can be reconstructed using sediments from the Japan Sea, as the WJ path and intensity determines dust emissions and transport paths from Chinese and Mongolian dust source areas, which is the primary source of terrigenous material to the Japan Sea. Radiogenic isotopes of Pb, Nd and Sr can be been applied to fingerprint the dust sources from Asia, and measurements of these isotopes downcore in the Japan Sea will allow reconstruction of the changing dust source area and thus behavior of the WJ. By coupling dust reconstructions lending insight to the behavior of the Westerly Jet with complementary records reflecting EAM intensity and precipitation distribution, the mean state and variability of the WJ and its coupling with the EAM can be examined. This study will measure a suite of samples for Pb, Nd and Sr isotopes from IODP Site U1430 over glacial-interglacial timescales, allowing detailed insights into changes in eolian sediment source regions in the Japan Sea and laying a foundation for future work examining millennial- and orbital-scale variability. Chiang, J.C.H., et al. 2015. Role of Seasonal Transitions and Westerly Jets in East Asian Paleoclimate, QSR, 108, 111-129.

A study of the variable impedance surface concept as a means for reducing noise from jet interaction with deployed lift-augmenting flaps

NASA Technical Reports Server (NTRS)

Hayden, R. E.; Kadman, Y.; Chanaud, R. C.

1972-01-01

The feasibility of quieting the externally-blown-flap (EBF) noise sources which are due to interaction of jet exhaust flow with deployed flaps was demonstrated on a 1/15-scale 3-flap EBF model. Sound field characteristics were measured and noise reduction fundamentals were reviewed in terms of source models. Test of the 1/15-scale model showed broadband noise reductions of up to 20 dB resulting from combination of variable impedance flap treatment and mesh grids placed in the jet flow upstream of the flaps. Steady-state lift, drag, and pitching moment were measured with and without noise reduction treatment.

Do Radio Jets Contribute to Driving Ionized Gas Outflows in Moderate Luminosity Type 2 AGN?

NASA Astrophysics Data System (ADS)

Fowler, Julia; Sajina, Anna; Lacy, Mark

2016-01-01

This poster examines the role of AGN-driven feedback in low to intermediate power radio galaxies. We begin with [OIII] measurements of ionized gas outflows in 29 moderate AGN-luminosity z~0.3-0.7 dust-obscured Type 2 AGN. We aim to examine the relative role of the AGN itself, of star-formation and of nascent radio jets in driving these outflows. The strength of the AGN and star formation are based on the [OIII] luminosities, and the far-IR luminosities respectively. For the radio jets, we present multi-frequency radio (X, S, and L-bands) JVLA imaging of our sample, which allows us both to constrain the overall radio power, but also look for signatures of young radio sources, including Giga-hertz Peaked Spectrum (GPS) sources, as well as small-scale jets. While radio jet-driven outflows are well known for powerful radio-loud galaxies, this study allows us to constrain the degree to which this mechanism is significant at more modest radio luminosities of L5GHz~10^22-25 W/Hz.

Validation of a reduced-order jet model for subsonic and underexpanded hydrogen jets

DOE PAGES

Li, Xuefang; Hecht, Ethan S.; Christopher, David M.

2016-01-01

Much effort has been made to model hydrogen releases from leaks during potential failures of hydrogen storage systems. A reduced-order jet model can be used to quickly characterize these flows, with low computational cost. Notional nozzle models are often used to avoid modeling the complex shock structures produced by the underexpanded jets by determining an “effective” source to produce the observed downstream trends. In our work, the mean hydrogen concentration fields were measured in a series of subsonic and underexpanded jets using a planar laser Rayleigh scattering system. Furthermore, we compared the experimental data to a reduced order jet modelmore » for subsonic flows and a notional nozzle model coupled to the jet model for underexpanded jets. The values of some key model parameters were determined by comparisons with the experimental data. Finally, the coupled model was also validated against hydrogen concentrations measurements for 100 and 200 bar hydrogen jets with the predictions agreeing well with data in the literature.« less

Conversion of crop seed oils to jet fuel and associated methods

DOEpatents

Ginosar, Daniel M.; Petkovic, Lucia M.; Thompson, David N.

2010-05-18

Aspects of the invention include methods to produce jet fuel from biological oil sources. The method may be comprised of two steps: hydrocracking and reforming. The process may be self-sufficient in heat and hydrogen.

The X-Ray Emission of the Centaurus A Jet.

PubMed

Birk; Lesch

2000-02-20

The extended nonthermal X-ray emission of extragalactic jets like Centaurus A can only be explained by in situ particle acceleration. The only energy source in the entire jet region is the magnetic field. Magnetic reconnection can convert the free energy stored in the helical configuration to particle kinetic energy. In the collisionless magnetized jet plasma, the inertia-driven reconnection is operating in a highly filamentary magnetic flux rope, and this results in a continuously charged particle acceleration. The synchrotron radiation of these particles can cause the observed X-ray emission in Centaurus A.

Effects of motion on jet exhaust noise from aircraft

NASA Technical Reports Server (NTRS)

Chun, K. S.; Berman, C. H.; Cowan, S. J.

1976-01-01

The various problems involved in the evaluation of the jet noise field prevailing between an observer on the ground and an aircraft in flight in a typical takeoff or landing approach pattern were studied. Areas examined include: (1) literature survey and preliminary investigation, (2) propagation effects, (3) source alteration effects, and (4) investigation of verification techniques. Sixteen problem areas were identified and studied. Six follow-up programs were recommended for further work. The results and the proposed follow-on programs provide a practical general technique for predicting flyover jet noise for conventional jet nozzles.

Identification of Noise Sources in High Speed Jets via Correlation Measurements: A Review

NASA Technical Reports Server (NTRS)

Bridges, James (Technical Monitor); Panda, Jayanta

2005-01-01

Significant advancement has been made in the last few years to identify noise sources in high speed jets via direct correlation measurements. In this technique turbulent fluctuations in the flow are correlated with far field acoustics signatures. In the 1970 s there was a surge of work using mostly intrusive probes, and a few using Laser Doppler Velocimetry, to measure turbulent fluctuations. The later experiments established "shear noise" as the primary source for the shallow angle noise. Various interpretations and criticisms from this time are described in the review. Recent progress in the molecular Rayleigh scattering based technique has provided a completely non-intrusive means of measuring density and velocity fluctuations. This has brought a renewed interest on correlation measurements. We have performed five different sets of experiments in single stream jets of different Mach number, temperature ratio and nozzle configurations. The present paper tries to summarize the correlation data from these works.

Response of multi-panel assembly to noise from a jet in forward motion

NASA Technical Reports Server (NTRS)

Bayliss, A.; Maestrello, L.; Mcgreevy, J. L.; Fenno, C. C., Jr.

1995-01-01

A model of the interaction of the noise from a spreading subsonic jet with a 4 panel assembly is studied numerically in two dimensions. The effect of forward motion of the jet is accounted for by considering a uniform flow field superimposed on a mean jet exit profile. The jet is initially excited by a pulse-like source inserted into the flow field. The pulse triggers instabilities associated with the inviscid instability of the jet shear layer. These instabilities generate sound which in turn serves to excite the panels. We compare the sound from the jet, the responses of the panels and the resulting acoustic radiation for the static jet and the jet in forward motion. The far field acoustic radiation, the panel response and sound radiated from the panels are all computed and compared to computations of a static jet. The results demonstrate that for a jet in forward motion there is a reduction in sound in downstream directions and an increase in sound in upstream directions in agreement with experiments. Furthermore, the panel response and radiation for a jet in forward motion exhibits a downstream attenuation as compared with the static case.

Dynamics of coherent flow structures of a pulsating unsteady glottal jet in human phonation.

NASA Astrophysics Data System (ADS)

Neubauer, Juergen; Miraghaie, Reza; Berry, David

2004-11-01

The primary sound source for human voice is oscillation of the vocal folds in the larynx. Phonation is the self-sustained oscillation of the viscoelastic vocal fold tissue driven by the air flow from the lung. It is due to the flow-induced Hopf instability of the biomechanical-aerodynamic system of vocal folds coupled to the aeroacoustic driving air flow. The aim of this study is to provide insight to the aero-acoustic part of the primary sound source of human voice. A physical rubber model of vocal folds with air flow conditions typical for human phonation was used. This model exhibits self-sustained oscillations similar to those in human phonation. The oscillating physical model can be regarded as a dynamic slit-like orifice that discharges a pulsating unsteady jet. A left-right flapping of the glottal jet axis was detected using hotwire anemometer measurements of the unsteady glottal jet. Flow visualization experiments revealed the detachment of the glottal jet from the physical model folds during the accelerating and decelerating phase of the jet pulsation. Roll-up of large-scale vortex rings as well as secondary vortex shedding in the form of Von Karman street due to shear layer instability were found downstream of the physical model.

Experimental and Analytical Determination of the Geometric Far Field for Round Jets

NASA Technical Reports Server (NTRS)

Koch, L. Danielle; Bridges, James E.; Brown, Clifford E.; Khavaran, Abbas

2005-01-01

An investigation was conducted at the NASA Glenn Research Center using a set of three round jets operating under unheated subsonic conditions to address the question: "How close is too close?" Although sound sources are distributed at various distances throughout a jet plume downstream of the nozzle exit, at great distances from the nozzle the sound will appear to emanate from a point and the inverse-square law can be properly applied. Examination of normalized sound spectra at different distances from a jet, from experiments and from computational tools, established the required minimum distance for valid far-field measurements of the sound from subsonic round jets. Experimental data were acquired in the Aeroacoustic Propulsion Laboratory at the NASA Glenn Research Center. The WIND computer program solved the Reynolds-Averaged Navier-Stokes equations for aerodynamic computations; the MGBK jet-noise prediction computer code was used to predict the sound pressure levels. Results from both the experiments and the analytical exercises indicated that while the shortest measurement arc (with radius approximately 8 nozzle diameters) was already in the geometric far field for high-frequency sound (Strouhal number >5), low-frequency sound (Strouhal number <0.2) reached the geometric far field at a measurement radius of at least 50 nozzle diameters because of its extended source distribution.

Cytokine dysregulation in AIDS: in vivo overexpression of mRNA of tumor necrosis factor-alpha and its correlation with that of the inflammatory cytokine GRO.

PubMed

Dezube, B J; Pardee, A B; Beckett, L A; Ahlers, C M; Ecto, L; Allen-Ryan, J; Anisowicz, A; Sager, R; Crumpacker, C S

1992-01-01

The human immunodeficiency virus establishes an intimate interaction with the immune system. The virus can use cytokines, such as tumor necrosis factor-alpha (TNF-alpha) and interleukin-1 (Il-1), to regulate its own expression by modifying the normal immunoregulatory network. We demonstrate that mRNA of the cytokine TNF-alpha from peripheral blood mononuclear cells is overexpressed in virtually all patients with AIDS who do not have active opportunistic infections compared with uninfected volunteers (p < 0.0001). This overexpression correlates with elevated mRNA levels of the recently discovered GRO (p < 0.05), a cytokine involved in the inflammatory response.

GSMS and space views: Advanced spacecraft monitoring tools

NASA Technical Reports Server (NTRS)

Carlton, Douglas; Vaules, David, Jr.; Mandl, Daniel

1993-01-01

The Graphical Spacecraft Monitoring System (GSMS) processes and translates real-time telemetry data from the Gamma Ray Observatory (GRO) spacecraft into high resolution 2-D and 3-D color displays showing the spacecraft's position relative to the Sun, Earth, Moon, and stars, its predicted orbit path, its attitude, instrument field of views, and other items of interest to the GRO Flight Operations Team (FOT). The GSMS development project is described and the approach being undertaken for implementing Space Views, the next version of GSMS, is presented. Space Views is an object-oriented graphical spacecraft monitoring system that will become a standard component of Goddard Space Flight Center's Transportable Payload Operations Control Center (TPOCC).

An Experimental Investigation of Unsteady Thrust Augmentation Using a Speaker-Driven Jet

NASA Technical Reports Server (NTRS)

Paxson, Daniel E.; Wernet, Mark P.; John, Wentworth T.

2004-01-01

An experimental investigation is described in which a simple speaker-driven jet was used as a pulsed thrust source (driver) for an ejector configuration. The objectives of the investigation were twofold: first, to add to the experimental body of evidence showing that an unsteady thrust source, combined with a properly sized ejector generally yields higher thrust augmentation values than a similarly sized, steady driver of equivalent thrust. Second, to identify characteristics of the unsteady driver that may be useful for sizing ejectors, and predicting what thrust augmentation values may be achieved. The speaker-driven jet provided a convenient source for the investigation because it is entirely unsteady (having no mean component) and because relevant parameters such as frequency, time-averaged thrust, and diameter are easily variable. The experimental setup will be described, as will the various measurements made. These include both thrust and Digital Particle Imaging Velocimetry of the driver. It will be shown that thrust augmentation values as high as 1.8 were obtained, that the diameter of the best ejector scaled with the dimensions of the emitted vortex, and that the so-called Formation Number serves as a useful dimensionless number by which to characterize the jet and predict performance.

Weak and compact radio emission in early massive star formation regions: an ionized jet toward G11.11–0.12P1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rosero, V.; Hofner, P.; McCoy, M.

2014-12-01

We report 1.3 cm and 6 cm continuum observations toward the massive proto-stellar candidate G11.11–0.12P1 using the Karl G. Jansky Very Large Array. We detect a string of four unresolved radio continuum sources coincident with the mid-infrared source in G11P1. The continuum sources have positive spectral indices consistent with a thermal (free-free) ionized jet. The most likely origins of the ionized gas are shocks due to the interaction of a stellar wind with the surrounding high-density material. We also present NIR United Kingdom Infrared Telescope (UKIRT) archival data that show an extended structure detected only at K band (2.2 μm),more » which is oriented perpendicular to the jet, and that may be scattered light from a circumstellar disk around the massive protostar. Our observations plus the UKIRT archival data thus provide new evidence that a disk/jet system is present in the massive proto-stellar candidate located in the G11.11–0.12P1 core.« less

Jets, hotspots and lobes: what X-ray observations tell us about extra-galactic radio sources.

PubMed

Hardcastle, Martin J

2005-12-15

The brightest and most numerous discrete radio sources in the sky, radio galaxies and quasars, are powered by twin jets of plasma which emerge at relativistic speeds from very small regions at the centre of large elliptical galaxies, powered by mass infall on to supermassive black holes. The jets can carry material out to very large distances (millions of light years) where it forms balloon-like lobes. Until recently it has been impossible to make definite statements about the energy or the nature of the matter supplied by the jets, or the dynamics of the lobes as they expand into the external medium. This has meant that crucial questions about the generation of radio sources and their effect on their environment have gone unanswered. The situation has been revolutionized by the launch at the start of this decade of a new generation of X-ray observatories, Chandra and XMM-Newton. In this article, I explain why observations with these instruments have made such a difference, what we have learned as a result and why the community remains divided on some important features of the interpretation of the data.

Extended X-Ray Jet in Nearby Galaxy Reveals Energy Source

NASA Astrophysics Data System (ADS)

1999-10-01

NASA's Chandra X-ray Observatory has made an extraordinary image of Centaurus A, a nearby galaxy noted for its explosive activity. The image shows X-ray jets erupting from the center of the galaxy over a distance of 25,000 light years. Also detected are a group of X-ray sources clustered around the nucleus, which is believed to harbor a supermassive black hole. The X-ray jets and the cluster of sources may be a byproduct of a titanic collision between galaxies several hundred million years ago. "This image is great," said Dr. Ethan Schreier of the Space Telescope Science Institute, "For twenty years we have been trying to understand what produced the X rays seen in the Centaurus A jet. Now we at last know that the X-ray emission is produced by extremely high-energy electrons spiraling around a magnetic field." Schreier explained that the length and shape of the X-ray jet pinned down the source of the radiation. The entire length of the X-ray jet is comparable to the diameter of the Milky Way Galaxy. Other features of the image excite scientists. "Besides the jets, one of the first things I noticed about the image was the new population of sources in the center of the galaxy," said Dr. Christine Jones from the Harvard-Smithsonian Center for Astrophysics . "They are grouped in a sphere around the nucleus, which must be telling us something very fundamental about how the galaxy, and the supermassive black hole in the center, were formed." Astronomers have accumulated evidence with optical and infrared telescopes that Centaurus A collided with a small spiral galaxy several hundred million years ago. This collision is believed to have triggered a burst of star formation and supplied gas to fuel the activity of the central black hole. more - According to Dr. Giuseppina Fabbiano, of Harvard-Smithsonian, "The Chandra image is like having a whole new laboratory to work in. Now we can see the main jet, the counter jet, and the extension of the jets beyond the galaxy. It is gorgeous in the detail it reveals," she said. Dr. Allyn Tennnant of NASA's Marshall Space Flight Center agreed. "It's incredible, being able to see all that structure in the jet," he said. "We have one fine X-ray telescope." Indeed at a distance of eleven million light years from Earth, Centaurus A has long been a favorite target of astronomers because it is the nearest example of a class of galaxies called active galaxies. Active galaxies are noted for their explosive activity, which is presumed to be due to a supermassive black hole in their center. The energy output due to the huge central black hole can in many cases affect the appearance of the entire galaxy. The Chandra X-ray image of Cen A, made with the High Resolution Camera, shows a bright source in the nucleus of the galaxy at the location of the suspected supermassive black hole. The bright jet extending out from the nucleus to the upper left is due to explosive activity around the black hole which ejects matter at high speeds from the vicinity of the black hole. A "counter jet" extending to the lower right can also be seen. This jet is probably pointing away from us, which accounts for its faint appearance. One of the most intriguing features of supermassive black holes is that they do not suck up all the matter that falls within their sphere of influence. Some of the matter falls inexorably toward the black hole, and some explodes away from the black hole in high-energy jets that move at near the speed of light. The presence of bright X-ray jets in the Chandra image means that electric fields are continually accelerating electrons to extremely high energies over enormous distances. Exactly how this happens is a major puzzle that Chandra may help to solve. To follow Chandra's progress, visit the Chandra site at: http://chandra.harvard.edu AND http://chandra.nasa.gov Dr. Stephen Murray of the Harvard-Smithsonian Center for Astrophysics is the principal investigator for the High Resolution Camera. NASA's Marshall Space Flight Center in Huntsville, AL, manages the Chandra program. TRW, Inc., Redondo Beach, CA, is the prime contractor for the spacecraft. The Smithsonian's Chandra X-ray Center controls science and flight operations from Cambridge, MA. High resolution digital versions of the X-ray image (JPG, 300 dpi TIFF) and other information associated with this release are available on the Internet at: http://chandra.harvard.edu/photo/0157/index.html or via links in: http://chandra.harvard.edu

Interaction between a pulsating jet and a surrounding disk wind. A hydrodynamical perspective

NASA Astrophysics Data System (ADS)

Tabone, B.; Raga, A.; Cabrit, S.; Pineau des Forêts, G.

2018-06-01

Context. The molecular richness of fast protostellar jets within 20-100 au of their source, despite strong ultraviolet irradiation, remains a challenge for the models investigated so far. Aim.We aim to investigate the effect of interaction between a time-variable jet and a surrounding steady disk wind, to assess the possibility of jet chemical enrichement by the wind, and the characteristic signatures of such a configuration. Methods: We have constructed an analytic model of a jet bow shock driven into a surrounding slower disk wind in the thin shell approximation. The refilling of the post bow shock cavity from below by the disk wind is also studied. An extension of the model to the case of two or more successive internal working surfaces (IWS) is made. We then compared this analytic model with numerical simulations with and without a surrounding disk wind. Results: We find that at early times (of order the variability period), jet bow shocks travel in refilled pristine disk wind material, before interacting with the cocoon of older bow shocks. This opens the possibility of bow shock chemical enrichment (if the disk wind is molecular and dusty) and of probing the unperturbed disk wind structure near the jet base. Several distinctive signatures of the presence of a surrounding disk wind are identified, in the bow shock morphology and kinematics. Numerical simulations validate our analytical approach and further show that at large scale, the passage of many jet IWS inside a disk wind produces a stationary V-shaped cavity, closing down onto the axis at a finite distance from the source.

Comparison of Selected EIA-782 Data With Other Data Sources

EIA Publications

2012-01-01

This article compares annual average prices reported from the EIA-782 survey series for residential No. 2 distillate, on-highway diesel fuel, retail regular motor gasoline, refiner No. 2 fuel oil for resale, refiner No. 2 diesel fuel for resale, refiner regular motor gasoline for resale, and refiner kerosene-type jet fuel for resale with annual average prices reported by other sources. In terms of volume, it compares EIA-782C Prime Supplier annual volumes for motor gasoline (all grades), distillate fuel oil, kerosene-type jet fuel and residual fuel oil with annual volumes from other sources.

Radial response of the burst and transient source experiment

NASA Technical Reports Server (NTRS)

Lestrade, John Patrick

1989-01-01

The Gamma Ray Observatory (GRO) includes four experiments designed for observe the gamma-ray universe, one of which is the Burst And Transient Source Experiment (BATSE). During the first summer with the BATSE team in 1988, laboratory measurements were completed which test the response of the BATSE modules to gamma-ray sources that are non-axial. The results of these observations are necessary for the correct interpretation of BATSE data obtained after it is put in earth orbit. Subsequent analysis of the data revealed a shift in the centroids of the full-energy photopeaks for angles of incidence between about 70 and 110 degrees. This effect was diagnosed as being due to a radial dependence of the light collecting efficiency of the large-area detector (LAD). Energy-depositing events that occur near the perimeter of the 10-inch radius NaI disc are not as efficiently collected as those events that occur near the disc's center. This radial response is analyzed and in so doing the non-Gaussian shape of the photopeaks seen in the spectra taken at all angles is explained.

Application of a Flip-Flop Nozzle on Plume Mixing Enhancement

NASA Technical Reports Server (NTRS)

Schreck, Stefan; Michaelian, Mark; Ho, Chih-Ming

1999-01-01

Mach wave radiation is a major source of noise in high speed jets. It is created by turbulent eddies which travel at supersonic speed within the shear layer of the jet. Downstream of the potential core, the convection speed of the eddies decays and noise production is reduced. Once the convection speeds drops below the speed of sound, eddy Mach wave radiation ceases. Mach wave radiation may be reduced by shortening the core length of the jet. This requires a faster growth of the shear layer, i.e. enhanced mixing in the jet. We investigated the possibility of mixing enhancement by the excitation of the instability waves in a supersonic rectangular jet.

Resonant Interaction of a Linear Array of Supersonic Rectangular Jets: an Experimental Study

NASA Technical Reports Server (NTRS)

Raman, Ganesh; Taghavi, Ray

1994-01-01

This paper examines a supersonic multi jet interaction problem that we believe is likely to be important for mixing enhancement and noise reduction in supersonic mixer-ejector nozzles. We demonstrate that it is possible to synchronize the screech instability of four rectangular jets by precisely adjusting the inter jet spacing. Our experimental data agrees with a theory that assumes that the phase-locking of adjacent jets occurs through a coupling at the jet lip. Although the synchronization does not change the frequency of the screech tone, its amplitude is augmented by 10 dB. The synchronized multi jets exhibit higher spreading than the unsynchronized jets, with the single jet spreading the least. We compare the nearfield noise of the four jets with synchronized screech to the noise of the sum of four jets operated individually. Our noise measurements reveal that the more rapid mixing of the synchronized multi jets causes the peak jet noise source to move up stream and to radiate noise at larger angles to the flow direction. Based on our results, we believe that screech synchronization is advantageous for noise reduction internal to a mixer-ejector nozzle, since the noise can now be suppressed by a shorter acoustically lined ejector.

Solar Coronal Jets: Observations, Theory, and Modeling

NASA Technical Reports Server (NTRS)

Raouafi, N. E.; Patsourakos, S.; Pariat, E.; Young, P. R.; Sterling, A. C.; Savcheva, A.; Shimojo, M.; Moreno-Insertis, F.; DeVore, C. R.; Archontis, V.;

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Xuefang; Hecht, Ethan S.; Christopher, David M.

Much effort has been made to model hydrogen releases from leaks during potential failures of hydrogen storage systems. A reduced-order jet model can be used to quickly characterize these flows, with low computational cost. Notional nozzle models are often used to avoid modeling the complex shock structures produced by the underexpanded jets by determining an “effective” source to produce the observed downstream trends. In our work, the mean hydrogen concentration fields were measured in a series of subsonic and underexpanded jets using a planar laser Rayleigh scattering system. Furthermore, we compared the experimental data to a reduced order jet modelmore » for subsonic flows and a notional nozzle model coupled to the jet model for underexpanded jets. The values of some key model parameters were determined by comparisons with the experimental data. Finally, the coupled model was also validated against hydrogen concentrations measurements for 100 and 200 bar hydrogen jets with the predictions agreeing well with data in the literature.« less

Solar Coronal Jets: Observations, Theory, and Modeling

NASA Technical Reports Server (NTRS)

Raouafi, N. E.; Patsourakos, S.; Pariat, E.; Young, P. R.; Sterling, A.; Savcheva, A.; Shimojo, M.; Moreno-Insertis, F.; Devore, C. R.; Archontis, V.;

High Velocity Jet Noise Source Location and Reduction. Task 3. Experimental Investigation of Suppression Principles. Volume IV. Laser Velocimeter Time Dependent Cross Correlation Measurements.

DTIC Science & Technology

1978-12-01

Density Filter Figure 4-4. Reference-Scatter or Direct Doppler Arrangement. L z--Scattering Miro 00 t! Volume L c K022 Laer Q7 K Photo Bea --nKO Tube...America, Vol. 30 No. 4, 1958, pp 318- 322 . 42. Seiner, J.M. and Reethof, G., "On the Distribution of Source Coherency in Subsonic Jets," AIAA 74-4 (1974). 43

Newly Uncovered Large-Scale Component of the Northern Jet in R Aqr

NASA Astrophysics Data System (ADS)

Montez, Rodolfo; Karovska, Margarita; Nichols, Joy S.; Kashyap, Vinay

2017-06-01

R Aqr is a symbiotic system comprised a compact white dwarf and Mira giant star. The interaction of these stars is responsible for the presence of a two-sided jet structure that is seen across the electromagnetic spectrum. X-ray emission from the jet was first discovered in 2000 with an observation by the Chandra X-ray Observatory. Since then follow-up observations have traced the evolution of the X-ray emission from the jet and a central compact source. In X-rays, the NE jet is brighter than the SW jet, but the full extent of the SW jet was larger - before it began fading below the detection threshold. However, we have uncovered evidence for large-scale emission associated with the NE jet that matches the extent of the SW jet. The emission has escaped previous identification because it is near the detection threshold, but it has been present since the first 2000 observation and clearly evolves in subsequent observations. We present our study of the emission from this component of the NE jet, its relationship to multiwavelength observations, and how it impacts our interpretation of the jet-phenomenon in R Aqr.

The kINPen—a review on physics and chemistry of the atmospheric pressure plasma jet and its applications

NASA Astrophysics Data System (ADS)

Reuter, Stephan; von Woedtke, Thomas; Weltmann, Klaus-Dieter

2018-06-01

The kINPen® plasma jet was developed from laboratory prototype to commercially available non-equilibrium cold plasma jet for various applications in materials research, surface treatment and medicine. It has proven to be a valuable plasma source for industry as well as research and commercial use in plasma medicine, leading to very successful therapeutic results and its certification as a medical device. This topical review presents the different kINPen plasma sources available. Diagnostic techniques applied to the kINPen are introduced. The review summarizes the extensive studies of the physics and plasma chemistry of the kINPen performed by research groups across the world, and closes with a brief overview of the main application fields.

Nascent Transcription Affected by RNA Polymerase IV in Zea mays

PubMed Central

Erhard, Karl F.; Talbot, Joy-El R. B.; Deans, Natalie C.; McClish, Allison E.; Hollick, Jay B.

2015-01-01

All eukaryotes use three DNA-dependent RNA polymerases (RNAPs) to create cellular RNAs from DNA templates. Plants have additional RNAPs related to Pol II, but their evolutionary role(s) remain largely unknown. Zea mays (maize) RNA polymerase D1 (RPD1), the largest subunit of RNA polymerase IV (Pol IV), is required for normal plant development, paramutation, transcriptional repression of certain transposable elements (TEs), and transcriptional regulation of specific alleles. Here, we define the nascent transcriptomes of rpd1 mutant and wild-type (WT) seedlings using global run-on sequencing (GRO-seq) to identify the broader targets of RPD1-based regulation. Comparisons of WT and rpd1 mutant GRO-seq profiles indicate that Pol IV globally affects transcription at both transcriptional start sites and immediately downstream of polyadenylation addition sites. We found no evidence of divergent transcription from gene promoters as seen in mammalian GRO-seq profiles. Statistical comparisons identify genes and TEs whose transcription is affected by RPD1. Most examples of significant increases in genic antisense transcription appear to be initiated by 3ʹ-proximal long terminal repeat retrotransposons. These results indicate that maize Pol IV specifies Pol II-based transcriptional regulation for specific regions of the maize genome including genes having developmental significance. PMID:25653306

Decoding Structural Properties of a Partially Unfolded Protein Substrate: En Route to Chaperone Binding.

PubMed

Nagpal, Suhani; Tiwari, Satyam; Mapa, Koyeli; Thukral, Lipi

2015-01-01

Many proteins comprising of complex topologies require molecular chaperones to achieve their unique three-dimensional folded structure. The E.coli chaperone, GroEL binds with a large number of unfolded and partially folded proteins, to facilitate proper folding and prevent misfolding and aggregation. Although the major structural components of GroEL are well defined, scaffolds of the non-native substrates that determine chaperone-mediated folding have been difficult to recognize. Here we performed all-atomistic and replica-exchange molecular dynamics simulations to dissect non-native ensemble of an obligate GroEL folder, DapA. Thermodynamics analyses of unfolding simulations revealed populated intermediates with distinct structural characteristics. We found that surface exposed hydrophobic patches are significantly increased, primarily contributed from native and non-native β-sheet elements. We validate the structural properties of these conformers using experimental data, including circular dichroism (CD), 1-anilinonaphthalene-8-sulfonic acid (ANS) binding measurements and previously reported hydrogen-deutrium exchange coupled to mass spectrometry (HDX-MS). Further, we constructed network graphs to elucidate long-range intra-protein connectivity of native and intermediate topologies, demonstrating regions that serve as central "hubs". Overall, our results implicate that genomic variations (or mutations) in the distinct regions of protein structures might disrupt these topological signatures disabling chaperone-mediated folding, leading to formation of aggregates.

Streptococcus oricebi sp. nov., isolated from the oral cavity of tufted capuchin.

PubMed

Saito, M; Shinozaki-Kuwahara, N; Hirasawa, M; Takada, K

2016-02-01

A Gram-stain-positive, catalase-negative, coccus-shaped organism was isolated from the oral cavity of tufted capuchin (Cebus apella). Comparative 16S rRNA gene sequence analysis suggested classification of the organism within the genus Streptococcus. Strain M8T was related most closely to Streptococcus oralis ATCC 35037T (96.17 % similarity) followed by Streptococcus massiliensis CCUG 49690T (95.90 %) based on the 16S rRNA gene. Strain M8T was related most closely to S. massiliensis CCUG 49690T (86.58 %) based on the RNA polymerase β subunit-encoding gene (rpoB), and to Streptococcus tigurinus AZ_3aT (81.26 %) followed by S. massiliensis CCUG 49690T (80.45 %) based on the 60 kDa heat-shock protein gene (groEL). The phylogenetic trees of 16S rRNA, rpoB and groEL gene sequences showed that strain M8T was most closely related to S. massiliensis. Based on phenotypic characterization as well as 16S rRNA gene and housekeeping gene (rpoB and groEL) sequence data, a novel taxon, Streptococcus oricebi sp. nov. (type strain M8T = JCM 30719T = DSM 100101T), is proposed.

The VLA Nascent Disk And Multiplicity Survey of Perseus Protostars (VANDAM). III. Extended Radio Emission from Protostars in Perseus

NASA Astrophysics Data System (ADS)

Tychoniec, Łukasz; Tobin, John J.; Karska, Agata; Chandler, Claire; Dunham, Michael M.; Li, Zhi-Yun; Looney, Leslie W.; Segura-Cox, Dominique; Harris, Robert J.; Melis, Carl; Sadavoy, Sarah I.

2018-01-01

Centimeter continuum emission from protostars offers insight into the innermost part of the outflows, as shock-ionized gas produces free–free emission. We observed a complete population of Class 0 and I protostars in the Perseus molecular cloud at 4.1 and 6.4 cm with resolution and sensitivity superior to previous surveys. From a total of 71 detections, eight sources exhibit resolved emission at 4.1 cm and/or 6.4 cm. In this paper, we focus on this subsample, analyzing their spectral indices along the jet and their alignment with respect to the large-scale molecular outflow. Spectral indices for fluxes integrated toward the position of the protostar are consistent with free–free thermal emission. The value of the spectral index along a radio jet decreases with distance from the protostar. For six sources, emission is well aligned with the outflow central axis, showing that we observe the ionized base of the jet. This is not the case for two sources, where we note misalignment of the emission with respect to the large-scale outflow. This might indicate that the emission does not originate in the radio jet, but rather in an ionized outflow cavity wall or disk surface. For five of the sources, the spectral indices along the jet decrease well below the thermal free–free limit of ‑0.1 with > 2σ significance. This is indicative of synchrotron emission, meaning that high-energy electrons are being produced in the outflows close to the disk. This result can have far-reaching implications for the chemical composition of the embedded disks.

Jet-induced medium excitation in γ-hadron correlation at RHIC

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Wei; Cao, Shanshan; Luo, Tan

Both jet transport and jet-induced medium excitation are investigated simultaneously within the coupled Linear Boltzmann Transport and hydro (CoLBT-hydro) model. In this coupled approach, energy-momentum deposition from propagating jet shower partons in the elastic and radiation processes is taken as a source term in hydrodynamics and the hydro background for LBT simulation is updated for next time step. We use CoLBT-hydro model to simulate γ-jet events of Au+Au collisions at RHIC. Hadron spectra from both the hadronization of jet shower partons and jet-induced medium excitation are calculated and compared to experimental data. Parton energy loss of jet shower partons leadsmore » to the suppression of hadron yields at large z T = p h T/p γ T while medium excitations leads to enhancement of hadron yields at small z T. Meanwhile, a significant broadening of low p T hadron yields and the depletion of soft hadrons in the γ direction are observed in the calculation of γ-hadron angular correlation.« less

Experimental and Numerical Investigation of Flow Properties of Supersonic Helium-Air Jets

NASA Technical Reports Server (NTRS)

Miller, Steven A. E.; Veltin, Jeremy

2010-01-01

Heated high speed subsonic and supersonic jets operating on- or off-design are a source of noise that is not yet fully understood. Helium-air mixtures can be used in the correct ratio to simulate the total temperature ratio of heated air jets and hence have the potential to provide inexpensive and reliable flow and acoustic measurements. This study presents a combination of flow measurements of helium-air high speed jets and numerical simulations of similar helium-air mixture and heated air jets. Jets issuing from axisymmetric convergent and convergent-divergent nozzles are investigated, and the results show very strong similarity with heated air jet measurements found in the literature. This demonstrates the validity of simulating heated high speed jets with helium-air in the laboratory, together with the excellent agreement obtained in the presented data between the numerical predictions and the experiments. The very close match between the numerical and experimental data also validates the frozen chemistry model used in the numerical simulation.

Jet-induced medium excitation in γ-hadron correlation at RHIC

DOE PAGES

Chen, Wei; Cao, Shanshan; Luo, Tan; ...

2017-09-25

Both jet transport and jet-induced medium excitation are investigated simultaneously within the coupled Linear Boltzmann Transport and hydro (CoLBT-hydro) model. In this coupled approach, energy-momentum deposition from propagating jet shower partons in the elastic and radiation processes is taken as a source term in hydrodynamics and the hydro background for LBT simulation is updated for next time step. We use CoLBT-hydro model to simulate γ-jet events of Au+Au collisions at RHIC. Hadron spectra from both the hadronization of jet shower partons and jet-induced medium excitation are calculated and compared to experimental data. Parton energy loss of jet shower partons leadsmore » to the suppression of hadron yields at large z T = p h T/p γ T while medium excitations leads to enhancement of hadron yields at small z T. Meanwhile, a significant broadening of low p T hadron yields and the depletion of soft hadrons in the γ direction are observed in the calculation of γ-hadron angular correlation.« less

Further Progress in Noise Source Identification in High Speed Jets via Causality Principle

NASA Technical Reports Server (NTRS)

Panda, J.; Seasholtz, R. G.; Elam, K. A.

2004-01-01

To locate noise sources in high-speed jets, the sound pressure fluctuations p/, measured at far field locations, were correlated with each of density p, axial velocity u, radial velocity v, puu and pvv fluctuations measured from various points in fully expanded, unheated plumes of Mach number 0.95, 1.4 and 1.8. The velocity and density fluctuations were measured simultaneously using a recently developed, non-intrusive, point measurement technique based on molecular Rayleigh scattering (Seasholtz, Panda, and Elam, AIAA Paper 2002-0827). The technique uses a continuous wave, narrow line-width laser, Fabry-Perot interferometer and photon counting electronics. The far field sound pressure fluctuations at 30 to the jet axis provided the highest correlation coefficients with all flow variables. The correlation coefficients decreased sharply with increased microphone polar angle, and beyond about 60 all correlation mostly fell below the experimental noise floor. Among all correlations < puu; p/> showed the highest values. Interestingly, , in all respects, were very similar to . The and correlations with 90deg microphone fell below the noise floor. By moving the laser probe at various locations in the jet it was found that the strongest noise source lies downstream of the end of the potential core and extends many diameters beyond. Correlation measurement from the lip shear layer showed a Mach number dependency. While significant correlations were measured in Mach 1.8 jet, values were mostly below the noise floor for subsonic Mach 0.95 jet. Various additional analyses showed that fluctuations from large organized structures mostly contributed to the measured correlation, while that from small scale structures fell below the noise floor.

Relativistic Jets on all Scales in Accreting Black Holes: Contributions from Simbol-X

NASA Astrophysics Data System (ADS)

Corbel, Stéphane

2009-05-01

In the last several years, multiwavelength observations of accreting black holes have allowed a general characterisation of black holes properties as they evolve along the course of their outburst cycles. Relativistic jets, in their multiple forms, have profoundly impacted our perception and understanding of emission processes in these systems. In these Proceedings, I will highlight some possible contributions from Simbol-X related to jets in accreting sources.

Brownfields to green fields: Realising wider benefits from practical contaminant phytomanagement strategies.

PubMed

Cundy, A B; Bardos, R P; Puschenreiter, M; Mench, M; Bert, V; Friesl-Hanl, W; Müller, I; Li, X N; Weyens, N; Witters, N; Vangronsveld, J

2016-12-15

Gentle remediation options (GROs) are risk management strategies or technologies involving plant (phyto-), fungi (myco-), and/or bacteria-based methods that result in a net gain (or at least no gross reduction) in soil function as well as effective risk management. GRO strategies can be customised along contaminant linkages, and can generate a range of wider economic, environmental and societal benefits in contaminated land management (and in brownfields management more widely). The application of GROs as practical on-site remedial solutions is still limited however, particularly in Europe and at trace element (typically metal and metalloid) contaminated sites. This paper discusses challenges to the practical adoption of GROs in contaminated land management, and outlines the decision support tools and best practice guidance developed in the European Commission FP7-funded GREENLAND project aimed at overcoming these challenges. The GREENLAND guidance promotes a refocus from phytoremediation to wider GROs- or phyto-management based approaches which place realisation of wider benefits at the core of site design, and where gentle remediation technologies can be applied as part of integrated, mixed, site risk management solutions or as part of "holding strategies" for vacant sites. The combination of GROs with renewables, both in terms of biomass generation but also with green technologies such as wind and solar power, can provide a range of economic and other benefits and can potentially support the return of low-level contaminated sites to productive usage, while combining GROs with urban design and landscape architecture, and integrating GRO strategies with sustainable urban drainage systems and community gardens/parkland (particularly for health and leisure benefits), has large potential for triggering GRO application and in realising wider benefits in urban and suburban systems. Quantifying these wider benefits and value (above standard economic returns) will be important in leveraging funding for GRO application and soft site end-use more widely at vacant or underutilized sites. Copyright © 2016 Elsevier Ltd. All rights reserved.

LAMBADA and InflateGRO2: efficient membrane alignment and insertion of membrane proteins for molecular dynamics simulations.

PubMed

Schmidt, Thomas H; Kandt, Christian

2012-10-22

At the beginning of each molecular dynamics membrane simulation stands the generation of a suitable starting structure which includes the working steps of aligning membrane and protein and seamlessly accommodating the protein in the membrane. Here we introduce two efficient and complementary methods based on pre-equilibrated membrane patches, automating these steps. Using a voxel-based cast of the coarse-grained protein, LAMBADA computes a hydrophilicity profile-derived scoring function based on which the optimal rotation and translation operations are determined to align protein and membrane. Employing an entirely geometrical approach, LAMBADA is independent from any precalculated data and aligns even large membrane proteins within minutes on a regular workstation. LAMBADA is the first tool performing the entire alignment process automatically while providing the user with the explicit 3D coordinates of the aligned protein and membrane. The second tool is an extension of the InflateGRO method addressing the shortcomings of its predecessor in a fully automated workflow. Determining the exact number of overlapping lipids based on the area occupied by the protein and restricting expansion, compression and energy minimization steps to a subset of relevant lipids through automatically calculated and system-optimized operation parameters, InflateGRO2 yields optimal lipid packing and reduces lipid vacuum exposure to a minimum preserving as much of the equilibrated membrane structure as possible. Applicable to atomistic and coarse grain structures in MARTINI format, InflateGRO2 offers high accuracy, fast performance, and increased application flexibility permitting the easy preparation of systems exhibiting heterogeneous lipid composition as well as embedding proteins into multiple membranes. Both tools can be used separately, in combination with other methods, or in tandem permitting a fully automated workflow while retaining a maximum level of usage control and flexibility. To assess the performance of both methods, we carried out test runs using 22 membrane proteins of different size and transmembrane structure.

NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions.

PubMed

Trevino, R J; Gliubich, F; Berni, R; Cianci, M; Chirgwin, J M; Zanotti, G; Horowitz, P M

1999-05-14

The NH2-terminal sequence of rhodanese influences many of its properties, ranging from mitochondrial import to folding. Rhodanese truncated by >9 residues is degraded in Escherichia coli. Mutant enzymes with lesser truncations are recoverable and active, but they show altered active site reactivities (Trevino, R. J., Tsalkova, T., Dramer, G., Hardesty, B., Chirgwin, J. M., and Horowitz, P. M. (1998) J. Biol. Chem. 273, 27841-27847), suggesting that the NH2-terminal sequence stabilizes the overall structure. We tested aspects of the conformations of these shortened species. Intrinsic and probe fluorescence showed that truncation decreased stability and increased hydrophobic exposure, while near UV CD suggested altered tertiary structure. Under native conditions, truncated rhodanese bound to GroEL and was released and reactivated by adding ATP and GroES, suggesting equilibrium between native and non-native conformers. Furthermore, GroEL assisted folding of denatured mutants to the same extent as wild type, although at a reduced rate. X-ray crystallography showed that Delta1-7 crystallized isomorphously with wild type in polyethyleneglycol, and the structure was highly conserved. Thus, the missing NH2-terminal residues that contribute to global stability of the native structure in solution do not significantly alter contacts at the atomic level of the crystallized protein. The two-domain structure of rhodanese was not significantly altered by drastically different crystallization conditions or crystal packing suggesting rigidity of the native rhodanese domains and the stabilization of the interdomain interactions by the crystal environment. The results support a model in which loss of interactions near the rhodanese NH2 terminus does not distort the folded native structure but does facilitate the transition in solution to a molten globule state, which among other things, can interact with molecular chaperones.

Molecular Epidemiological Survey and Genetic Characterization of Anaplasma Species in Mongolian Livestock.

PubMed

Ochirkhuu, Nyamsuren; Konnai, Satoru; Odbileg, Raadan; Murata, Shiro; Ohashi, Kazuhiko

2017-08-01

Anaplasma species are obligate intracellular rickettsial pathogens that cause great economic loss to the animal industry. Few studies on Anaplasma infections in Mongolian livestock have been conducted. This study examined the prevalence of Anaplasma marginale, Anaplasma ovis, Anaplasma phagocytophilum, and Anaplasma bovis by polymerase chain reaction assay in 928 blood samples collected from native cattle and dairy cattle (Bos taurus), yaks (Bos grunniens), sheep (Ovis aries), and goats (Capra aegagrus hircus) in four provinces of Ulaanbaatar city in Mongolia. We genetically characterized positive samples through sequencing analysis based on the heat-shock protein groEL, major surface protein 4 (msp4), and 16S rRNA genes. Only A. ovis was detected in Mongolian livestock (cattle, yaks, sheep, and goats), with 413 animals (44.5%) positive for groEL and 308 animals (33.2%) positive for msp4 genes. In the phylogenetic tree, we separated A. ovis sequences into two distinct clusters based on the groEL gene. One cluster comprised sequences derived mainly from sheep and goats, which was similar to that in A. ovis isolates from other countries. The other divergent cluster comprised sequences derived from cattle and yaks and appeared to be newly branched from that in previously published single isolates in Mongolian cattle. In addition, the msp4 gene of A. ovis using same and different samples with groEL gene of the pathogen demonstrated that all sequences derived from all animal species, except for three sequences derived from cattle and yak, were clustered together, and were identical or similar to those in isolates from other countries. We used 16S rRNA gene sequences to investigate the genetically divergent A. ovis and identified high homology of 99.3-100%. However, the sequences derived from cattle did not match those derived from sheep and goats. The results of this study on the prevalence and molecular characterization of A. ovis in Mongolian livestock can facilitate the control of infectious diseases in livestock.

Status of jet noise

NASA Technical Reports Server (NTRS)

Banerian, G.

1977-01-01

The fundamentals of jet noise generation and suppression have been studied in great detail over the past twenty-five years. Considerable progress has been made recently in our understanding of this subject, though some aspects of it remain perplexing. The importance of accounting for the influence of the jets mean flow in shrouding acoustic sources is now recognized and the large amount of information obtained on jet noise reduction schemes, e.g., the internal mixer nozzle, the inverted profile nozzle and multi-element suppressors, has helped clarify trends and identify remaining issues. Current understanding of inflight effects is limited and in need of much more attention.

MALDI-TOF MS for identification of Tsukamurella species: Tsukamurella tyrosinosolvens as the predominant species associated with ocular infections.

PubMed

Teng, Jade L L; Tang, Ying; Wong, Samson S Y; Fong, Jordan Y H; Zhao, Zhe; Wong, Chun-Pong; Chen, Jonathan H K; Ngan, Antonio H Y; Wu, Alan K L; Fung, Kitty S C; Que, Tak-Lun; Lau, Susanna K P; Woo, Patrick C Y

2018-05-09

Although Tsukamurella infections have been increasingly reported in Europe, Asia, America, and Africa, indicating that diseases caused by this group of bacteria are emerging in a global scale, species identification within this genus is difficult in most clinical microbiology laboratories. Recently, we showed that groEL gene sequencing is useful for identification of all existing Tsukamurella species. Nevertheless, PCR sequencing is still considered expensive, time-consuming, and technically demanding, and therefore is yet to be incorporated as a routine identification method in clinical laboratories. Using groEL gene sequencing as the reference method, 60 Tsukamurella isolates were identified as five different Tsukamurella species [T. tyrosinosolvens (n = 31), T. pulmonis (n = 25), T. hongkongensis (n = 2), T. strandjordii (n = 1), and T. sinensis (n = 1)]. The most common source of the patient isolates were the eye (n = 18), sputum (n = 6), and blood (n = 6). None of the 60 isolates were identified correctly to species level by MALDI-TOF MS with the original Bruker database V.6.0.0.0. Using the Bruker database extended with 15 type and reference strains which covered all the currently recognized 11 Tsukamurella species, 59 of the 60 isolates were correctly identified to the species level with score ≥2.0. MALDI-TOF MS should be useful for routine species identification of Tsukamurella in clinical microbiology laboratories after optimization of the database. T. tyrosinosolvens was the most common species observed in patients with Tsukamurella infections and the predominant species associated with ocular infections.

XTE J1946+274 = GRO J1944+26: An Enigmatic Be/X-Ray Binary

NASA Technical Reports Server (NTRS)

Wilson, Colleen A.; Finger, Mark H.; Coe, M. J.; Negueruela, Ignacio

2003-01-01

XTE J1946+274 = GRO J1944+26 is a 15.8 s Be/X-ray pulsar discovered simultaneously in 1998 September with the Burst and Transient Source Experiment (BATSE) on the Compton Gamma Ray Observatory (CGRO) and the All-Sky Monitor (ASM) on the Rossi X-Ray Timing Explorer (RXTE). Here we present new results from BATSE and RXTE including a pulse timing analysis, spectral analysis, and evidence for an accretion disk. Our pulse timing analysis yielded an orbital period of 169.2 days, a moderate eccentricity 0.33, and implied a mass function of 9.7 solar masses. We observed evidence for an accretion disk, a correlation between measured spin-up rate and flux, which was fitted to obtain a distance estimate of 9.5 +/- 2.9 kpc. XTE J1946+274 remained active from 1998 September to 2001 July, undergoing 13 outbursts that were not locked in orbital phase. Comparing RXTE Proportional Counter Array observations from the initial bright outburst in 1998 and the last pair of outbursts in 2001, we found energy and intensity-dependent pulse profile variations in both outbursts and hardening spectra with increasing intensity during the fainter 2001 outbursts. In 2001 July, optical H alpha observations indicated that a density perturbation appeared in the Be disk as the X-ray outbursts ceased. We propose that the equatorial plane of the Be star is inclined with respect to the orbital plane in this system and that this inclination may be a factor in the unusual outburst behavior of the system.

Very Large Array Ammonia Observations of the HH 111/HH 121 Protostellar System: A Detection of a New Source with a Peculiar Chemistry

NASA Astrophysics Data System (ADS)

Sewiło, Marta; Wiseman, Jennifer; Indebetouw, Remy; Charnley, Steven B.; Pineda, Jaime E.; Lindberg, Johan E.; Qin, Sheng-Li

2017-11-01

We present the results of Very Large Array NH3 (J,K)=(1,1) and (2,2) observations of the HH 111/HH 121 protostellar system. HH 111, with a spectacular collimated optical jet, is one of the most well-known Herbig-Haro objects. We report the detection of a new source, NH3-S, in the vicinity of HH 111/HH 121 (˜0.03 pc from the HH 111 jet source) in two epochs of the ammonia observations. This constitutes the first detection of this source, in a region that has been thoroughly covered previously by both continuum and spectral line interferometric observations. We study the kinematic and physical properties of HH 111 and the newly discovered NH3-S. We also use HCO+ and HCN (J=4-3) data obtained with the James Clerk Maxwell Telescope and archival Atacama Large Millimeter/submillimeter Array 13CO, 12CO, and C18O (J=2-1), N2D+ (J=3-2), and 13CS (J=5-4) data to gain insight into the nature of NH3-S. The chemical structure of NH3-S shows evidence for “selective freeze-out,” an inherent characteristic of dense cold cores. The inner part of NH3-S shows subsonic nonthermal velocity dispersions indicating a “coherent core,” while they increase in the direction of the jets. Archival near- to far-infrared data show no indication of any embedded source in NH3-S. The properties of NH3-S and its location in the infrared dark cloud suggest that it is a starless core located in a turbulent medium, with the turbulence induced by Herbig-Haro jets and associated outflows. More data are needed to fully understand the physical and chemical properties of NH3-S and if/how its evolution is affected by nearby jets.

Very Large Array Ammonia Observations of the HH 111/HH 121 Protostellar System: A Detection of a New Source with a Peculiar Chemistry

NASA Technical Reports Server (NTRS)

Sewilo, Marta; Wiseman, Jennifer; Indebetouw, Remy; Charnley, Steven B.; Pineda, Jaime E.; Lindberg, Johan E.; Qin, Sheng-Li

2017-01-01

We present the results of Very Large Array NH3 (J, K) = (1, 1) and (2, 2) observations of the HH 111/HH 121 protostellar system. HH 111, with a spectacular collimated optical jet, is one of the most well-known Herbig-Haro objects. We report the detection of a new source, NH3-S, in the vicinity of HH 111/HH 121 (approximately 0.03 parsecs from the HH 111 jet source) in two epochs of the ammonia observations. This constitutes the first detection of this source, in a region that has been thoroughly covered previously by both continuum and spectral line interferometric observations. We study the kinematic and physical properties of HH 111 and the newly discovered NH3-S. We also use HCO plus and HCN (J=4-3) data obtained with the James Clerk Maxwell Telescope and archival Atacama Large Millimeter/submillimeter Array (sup 13) CO, (sup 12) CO, and C (sup 18) O (J=2-1), N2D plus (J=3-2), and (sup 13) CS (J=5-4) data to gain insight into the nature of NH3-S. The chemical structure of NH3-S shows evidence for "selective freeze-out,"� an inherent characteristic of dense cold cores. The inner part of NH3-S shows subsonic nonthermal velocity dispersions indicating a "coherent core,"� while they increase in the direction of the jets. Archival near- to far-infrared data show no indication of any embedded source in NH3-S. The properties of NH3-S and its location in the infrared dark cloud suggest that it is a starless core located in a turbulent medium, with the turbulence induced by Herbig-Haro jets and associated outflows. More data are needed to fully understand the physical and chemical properties of NH3-S and if/how its evolution is affected by nearby jets.

Plasma-surface interaction in the Be/W environment: Conclusions drawn from the JET-ILW for ITER

NASA Astrophysics Data System (ADS)

Brezinsek, S.; JET-EFDA contributors

2015-08-01

The JET ITER-Like Wall experiment (JET-ILW) provides an ideal test bed to investigate plasma-surface interaction (PSI) and plasma operation with the ITER plasma-facing material selection employing beryllium in the main chamber and tungsten in the divertor. The main PSI processes: material erosion and migration, (b) fuel recycling and retention, (c) impurity concentration and radiation have be1en studied and compared between JET-C and JET-ILW. The current physics understanding of these key processes in the JET-ILW revealed that both interpretation of previously obtained carbon results (JET-C) and predictions to ITER need to be revisited. The impact of the first-wall material on the plasma was underestimated. Main observations are: (a) low primary erosion source in H-mode plasmas and reduction of the material migration from the main chamber to the divertor (factor 7) as well as within the divertor from plasma-facing to remote areas (factor 30 - 50). The energetic threshold for beryllium sputtering minimises the primary erosion source and inhibits multi-step re-erosion in the divertor. The physical sputtering yield of tungsten is low as 10-5 and determined by beryllium ions. (b) Reduction of the long-term fuel retention (factor 10 - 20) in JET-ILW with respect to JET-C. The remaining retention is caused by implantation and co-deposition with beryllium and residual impurities. Outgassing has gained importance and impacts on the recycling properties of beryllium and tungsten. (c) The low effective plasma charge (Zeff = 1.2) and low radiation capability of beryllium reveal the bare deuterium plasma physics. Moderate nitrogen seeding, reaching Zeff = 1.6 , restores in particular the confinement and the L-H threshold behaviour. ITER-compatible divertor conditions with stable semi-detachment were obtained owing to a higher density limit with ILW. Overall JET demonstrated successful plasma operation in the Be/W material combination and confirms its advantageous PSI behaviour and gives strong support to the ITER material selection.

Enceladus's Plumes: A Rocket Analogy

NASA Astrophysics Data System (ADS)

McNutt, R. L.; Perry, M. E.; Waite, J. H.; Fletcher, G.; Cravens, T. E.

2009-12-01

The plumes of Enceladus, and the source of the E-ring in the Saturnian system, easily rank as the major, significant, and unexpected discovery of the Cassini mission. While clearly the source of the E-ring,the nature of the sources and the energetics and dynamics of the plumes and underlying jets remains a subject of intensive study. Refinements of the observations suggest supersonic flow of the primary, water-vapor effluent. Such behavior implies a sonic critical point in the flow beginning from a heated reservoir of vapor, through a constriction, and out at supersonic speeds in the space above the plume/jet channels. Such geometry and thermal conditions mimic that of a de Laval nozzle, such as used in rocket engines for converting chemically heated combustion products into a directional flow. A chamber temperature of 180K suggests an outflow speed as high as 0.8 km/s. With a column density across a jet of ~3 x 1016 cm-2 (about twice that of the broad plume) and a jet width of ~10 km, the implied outflow of water molecules is ~3 x 1010 cm-3 x π/4 (106 cm)2 x 18 amu x 1.66 x 10-27 amu/kg x 8 x 104 cm/s = ~60 kg/s in each constituent jet, of which eight were identified by the Cassini Ultraviolet Imaging Spectrograph (UVIS) during the occultation measurements of the plume region of Enceladus carried out on 24 October 2007.

Acoustics of Jet Surface Interaction - Scrubbing Noise

NASA Technical Reports Server (NTRS)

Khavaran, Abbas

2014-01-01

Concepts envisioned for the future of civil air transport consist of unconventional propulsion systems in the close proximity to the structure or embedded in the airframe. While such integrated systems are intended to shield noise from the community, they also introduce new sources of sound. Sound generation due to interaction of a jet flow past a nearby solid surface is investigated here using the generalized acoustic analogy theory. The analysis applies to the boundary layer noise generated at and near a wall, and excludes the scattered noise component that is produced at the leading or the trailing edge. While compressibility effects are relatively unimportant at very low Mach numbers, frictional heat generation and thermal gradient normal to the surface could play important roles in generation and propagation of sound in high speed jets of practical interest. A general expression is given for the spectral density of the far field sound as governed by the variable density Pridmore-Brown equation. The propagation Green's function is solved numerically for a high aspect-ratio rectangular jet starting with the boundary conditions on the surface and subject to specified mean velocity and temperature profiles between the surface and the observer. It is shown the magnitude of the Green's function decreases with increasing source frequency and/or jet temperature. The phase remains constant for a rigid surface, but varies with source location when subject to an impedance type boundary condition. The Green's function in the absence of the surface, and flight effects are also investigated

Acoustics of Jet Surface Interaction-Scrubbing Noise

NASA Technical Reports Server (NTRS)

Khavaran, Abbas

2014-01-01

Concepts envisioned for the future of civil air transport consist of unconventional propulsion systems in the close proximity of the structure or embedded in the airframe. While such integrated systems are intended to shield noise from community, they also introduce new sources of sound. Sound generation due to interaction of a jet flow past a nearby solid surface is investigated here using the generalized acoustic analogy theory. The analysis applies to the boundary layer noise generated at and near a wall, and excludes the scattered noise component that is produced at the leading or the trailing edge. While compressibility effects are relatively unimportant at very low Mach numbers, frictional heat generation and thermal gradient normal to the surface could play important roles in generation and propagation of sound in high speed jets of practical interest. A general expression is given for the spectral density of the far field sound as governed by the variable density Pridmore-Brown equation. The propagation Greens function is solved numerically for a high aspect-ratio rectangular jet starting with the boundary conditions on the surface and subject to specified mean velocity and temperature profiles between the surface and the observer. It is shown the magnitude of the Greens function decreases with increasing source frequency andor jet temperature. The phase remains constant for a rigid surface, but varies with source location when subject to an impedance type boundary condition. The Greens function in the absence of the surface, and flight effect are also investigated.

Highly porous micro-roughened structures developed on aluminum surface using the jet of rotating arc discharges at atmospheric pressure

NASA Astrophysics Data System (ADS)

Asadollahi, Siavash; Farzaneh, Masoud; Stafford, Luc

2018-02-01

Aluminum 6061 samples were exposed to the jet of an atmospheric pressure rotating arc discharge operated in either nitrogen or air. After multiple passes of treatment with an air-based plasma jet at very short source-to-substrate distances, scanning electron microscopy combined with x-ray photoelectron spectroscopy revealed a highly porous micro-roughened alumina-based structure on the surface of aluminum. Based on optical emission spectroscopy and high-speed optical imaging of the jet interacting with aluminum samples, it was found that the process is mainly driven by the energy transfer from the plasma source to the surface through transient plasma-transferred arcs. The occurrence of multiple arc discharges over very short time scales can induce rapid phase transformations of aluminum with characteristics similar to the ones usually observed during laser ablation of materials with femto- to nanosecond laser pulses or during the formation of cathode spots on the surface of metals.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Larsson, Daniel H.; Lundstroem, Ulf; Burvall, Anna

Purpose: Small-animal studies require images with high spatial resolution and high contrast due to the small scale of the structures. X-ray imaging systems for small animals are often limited by the microfocus source. Here, the authors investigate the applicability of liquid-metal-jet x-ray sources for such high-resolution small-animal imaging, both in tomography based on absorption and in soft-tissue tumor imaging based on in-line phase contrast. Methods: The experimental arrangement consists of a liquid-metal-jet x-ray source, the small-animal object on a rotating stage, and an imaging detector. The source-to-object and object-to-detector distances are adjusted for the preferred contrast mechanism. Two different liquid-metal-jetmore » sources are used, one circulating a Ga/In/Sn alloy and the other an In/Ga alloy for higher penetration through thick tissue. Both sources are operated at 40-50 W electron-beam power with {approx}7 {mu}m x-ray spots, providing high spatial resolution in absorption imaging and high spatial coherence for the phase-contrast imaging. Results: High-resolution absorption imaging is demonstrated on mice with CT, showing 50 {mu}m bone details in the reconstructed slices. High-resolution phase-contrast soft-tissue imaging shows clear demarcation of mm-sized tumors at much lower dose than is required in absorption. Conclusions: This is the first application of liquid-metal-jet x-ray sources for whole-body small-animal x-ray imaging. In absorption, the method allows high-resolution tomographic skeletal imaging with potential for significantly shorter exposure times due to the power scalability of liquid-metal-jet sources. In phase contrast, the authors use a simple in-line arrangement to show distinct tumor demarcation of few-mm-sized tumors. This is, to their knowledge, the first small-animal tumor visualization with a laboratory phase-contrast system.« less

Some aspects of the aeroacoustics of high-speed jets

NASA Technical Reports Server (NTRS)

Lighthill, James

1993-01-01

Some of the background to contemporary jet aeroacoustics is addressed. Then scaling laws for noise generation by low-Mach-number airflows and by turbulence convected at 'not so low' Mach number is reviewed. These laws take into account the influence of Doppler effects associated with the convection of aeroacoustic sources. Next, a uniformly valid Doppler-effect approximation exhibits the transition, with increasing Mach number of convection, from compact-source radiation at low Mach numbers to a statistical assemblage of conical shock waves radiated by eddies convected at supersonic speed. In jets, for example, supersonic eddy convection is typically found for jet exit speeds exceeding twice the atmospheric speed of sound. The Lecture continues by describing a new dynamical theory of the nonlinear propagation of such statistically random assemblages of conical shock waves. It is shown, both by a general theoretical analysis and by an illustrative computational study, how their propagation is dominated by a characteristic 'bunching' process. That process associated with a tendency for shock waves that have already formed unions with other shock waves to acquire an increased proneness to form further unions - acts so as to enhance the high-frequency part of the spectrum of noise emission from jets at these high exit speeds.

Jet Surface Interaction Scrubbing Noise from High Aspect-Ratio Rectangular Jets

NASA Technical Reports Server (NTRS)

Khavaran, Abbas; Bozak, Richard F.

2015-01-01

Concepts envisioned for the future of civil air transport consist of unconventional propulsion systems in the close proximity of the airframe. Distributed propulsion system with exhaust configurations that resemble a high aspect ratio rectangular jet are among geometries of interest. Nearby solid surfaces could provide noise shielding for the purpose of reduced community noise. Interaction of high-speed jet exhaust with structure could also generate new sources of sound as a result of flow scrubbing past the structure, and or scattered noise from sharp edges. The present study provides a theoretical framework to predict the scrubbing noise component from a high aspect ratio rectangular exhaust in proximity of a solid surface. The analysis uses the Greens function (GF) to the variable density Pridmore-Brown equation in a transversely sheared mean flow. Sources of sound are defined as the auto-covariance function of second-rank velocity fluctuations in the jet plume, and are modeled using a RANS-based acoustic analogy approach. Acoustic predictions are presented in an 8:1 aspect ratio rectangular exhaust at three subsonic Mach numbers. The effect of nearby surface on the scrubbing noise component is shown on both reflected and shielded sides of the plate.

The flip-flop nozzle extended to supersonic flows

NASA Technical Reports Server (NTRS)

Raman, Ganesh; Hailye, Michael; Rice, Edward J.

1992-01-01

An experiment studying a fluidically oscillated rectangular jet flow was conducted. The Mach number was varied over a range from low subsonic to supersonic. Unsteady velocity and pressure measurements were made using hot wires and piezoresistive pressure transducers. In addition smoke flow visualization using high speed photography was used to document the oscillation of the jet. For the subsonic flip-flop jet it was found that the apparent time-mean widening of the jet was not accompanied by an increase in mass flux. It was found that it is possible to extend the operation of these devices to supersonic flows. Most of the measurements were made for a fixed nozzle geometry for which the oscillations ceased at a fully expanded Mach number of 1.58. By varying the nozzle geometry this limitation was overcome and operation was extended to Mach 1.8. The streamwise velocity perturbation levels produced by this device were much higher than the perturbation levels that could be produced using conventional excitation sources such as acoustic drivers. In view of this ability to produce high amplitudes, the potential for using small scale fluidically oscillated jet as an unsteady excitation source for the control of shear flows in full scale practical applications seems promising.

The flip flop nozzle extended to supersonic flows

NASA Technical Reports Server (NTRS)

Raman, Ganesh; Hailye, Michael; Rice, Edward J.

1992-01-01

An experiment studying a fluidically oscillated rectangular jet flow was conducted. The Mach number was varied over a range from low subsonic to supersonic. Unsteady velocity and pressure measurements were made using hot wires and piezoresistive pressure transducers. In addition smoke flow visualization using high speed photography was used to document the oscillation of the jet. For the subsonic flip-flop jet it was found that the apparent time-mean widening of the jet was not accompanied by an increase in mass flux. It was found that it is possible to extend the operation of these devices to supersonic flows. Most of the measurements were made for a fixed nozzle geometry for which the oscillations ceased at a fully expanded Mach number of 1.58. By varying the nozzle geometry this limitation was overcome and operation was extended to Mach 1.8. The streamwise velocity perturbation levels produced by this device were much higher than the perturbation levels that could be produced using conventional excitation sources such as acoustic drivers. In view of this ability to produce high amplitudes, the potential for using small scale fluidically oscillated jet as an unsteady excitation source for the control of shear flows in full scale practical applications seems promising.

The Prediction and Analysis of Jet Flows and Scattered Turbulent Mixing Noise about Flight Vehicle Airframes

NASA Technical Reports Server (NTRS)

Miller, Steven A. E.

2014-01-01

Jet flows interacting with nearby surfaces exhibit a complex behavior in which acoustic and aerodynamic characteristics are altered. The physical understanding and prediction of these characteristics are essential to designing future low noise aircraft. A new approach is created for predicting scattered jet mixing noise that utilizes an acoustic analogy and steady Reynolds-averaged Navier-Stokes solutions. A tailored Green's function accounts for the propagation of mixing noise about the airframe and is calculated numerically using a newly developed ray tracing method. The steady aerodynamic statistics, associated unsteady sound source, and acoustic intensity are examined as jet conditions are varied about a large flat plate. A non-dimensional number is proposed to estimate the effect of the aerodynamic noise source relative to jet operating condition and airframe position.The steady Reynolds-averaged Navier-Stokes solutions, acoustic analogy, tailored Green's function, non-dimensional number, and predicted noise are validated with a wide variety of measurements. The combination of the developed theory, ray tracing method, and careful implementation in a stand-alone computer program result in an approach that is more first principles oriented than alternatives, computationally efficient, and captures the relevant physics of fluid-structure interaction.

The Prediction and Analysis of Jet Flows and Scattered Turbulent Mixing Noise About Flight Vehicle Airframes

NASA Technical Reports Server (NTRS)

Miller, Steven A.

2014-01-01

Jet flows interacting with nearby surfaces exhibit a complex behavior in which acoustic and aerodynamic characteristics are altered. The physical understanding and prediction of these characteristics are essential to designing future low noise aircraft. A new approach is created for predicting scattered jet mixing noise that utilizes an acoustic analogy and steady Reynolds-averaged Navier-Stokes solutions. A tailored Green's function accounts for the propagation of mixing noise about the air-frame and is calculated numerically using a newly developed ray tracing method. The steady aerodynamic statistics, associated unsteady sound source, and acoustic intensity are examined as jet conditions are varied about a large at plate. A non-dimensional number is proposed to estimate the effect of the aerodynamic noise source relative to jet operating condition and airframe position. The steady Reynolds-averaged Navier-Stokes solutions, acoustic analogy, tailored Green's function, non- dimensional number, and predicted noise are validated with a wide variety of measurements. The combination of the developed theory, ray tracing method, and careful implementation in a stand-alone computer program result in an approach that is more first principles oriented than alternatives, computationally efficient, and captures the relevant physics of fluid-structure interaction.

The generation of a tunable laser emission in the vacuum ultraviolet and its application to supersonic jet/multiphoton ionization mass spectrometry

NASA Astrophysics Data System (ADS)

Uchimura, Tomohiro; Onoda, Takayuki; Lin, Cheng-Huang; Imasaka, Totaro

1999-08-01

An optical parametric oscillator and a Ti:sapphire laser are used as a pump source for the generation of high-order vibrational stimulated Raman emission in the vacuum ultraviolet region. This tunable laser is employed as an excitation/ionization source in a supersonic jet/multiphoton ionization/time-of-flight mass spectrometric study of benzene. The merits and potential advantages of this approach are discussed in this study.

Relativistic jet models for the BL Lacertae object Mrk 421 during three epochs of observation

NASA Technical Reports Server (NTRS)

Mufson, S. L.; Hutter, D. J.; Kondo, Y.; Wisniewski, W. Z.

1988-01-01

Coordinated observation of the nearby BL Lacertae object Mrk 421 obtained during May 1980, January 1984, and March 1984 are described. These observations give a time-frozen picture of the continuous spectrum of Mrk 421 at X-ray, ultraviolet, optical, and radio wavelengths. The observed spectra have been fitted to an inhomogeneous relativistic jet model. In general, the models reproduce the data well. Many of the observed differences during the three epochs can be attributed to variations in the opening angle of the jet and in the angle that the jet makes to the line of sight. The jet models obtained here are compared with the homogeneous, spherically symmetric, synchrotron self-Compton models for this source. The models are also compared with the relativistic jet models obtained for other active galactic nuclei.

Accretion processes of radio galaxies at high energies

NASA Astrophysics Data System (ADS)

de Jong, Sandra

2013-10-01

AGN are the luminous (L>10^42 erg/s) cores of active galaxies, powered by accretion onto the central super massive black hole, either via an accretion disk or via a radiatively inefficient accretion flow. There are still several open questions, for example on the launching of jets, which are present in about 10% of the AGN. Another question appeared with the Fermi/LAT gamma-ray survey, which detected many blazars but also a small group of radio galaxies. Radio galaxies are postulated to be blazars where the observer sees the jet at an angle θ>10 degrees allowing a view of both jet and core, rather than only the jet as is the case with blazars. Radio galaxies are divided into two classes, depending on the radio luminosity of the jets. The Fanaroff-Riley I (FR-I) sources have jets that are bright near the core, where the FR-IIs display extended edge-brightened jets. The FR-I sources are connected to the BL Lacs, which are low-luminosity blazars. FR-II types are thought to be the parent population of the luminous FSRQ, which are also blazars. This thesis presents a study of gamma-ray bright radio galaxies. By analysing X-ray and gamma-ray data in addition to creating broad-band spectral energy distributions (SEDs), we studied two examples of this new class of sources. For the FR-II source 3C 111 we analysed Suzaku/XIS and PIN and INTEGRAL IBIS/ISGRI observations to create a X-ray spectrum. We also used a Swift/BAT spectrum from the 58-month survey. The 0.4-200 keV spectrum of the source shows both thermal, Seyfert-like signatures such as an iron K-α line, and non-thermal jet features. We also analysed gamma-ray data from Fermi/LAT. The gamma-ray and X-ray data are combined with historical radio, infrared and optical observations to build the SED, which can be well represented with a non-thermal jet model. The bolometric luminosity of 3C111 is rather low, and the SED model shows rather a BL Lac type than the expected FSRQ. The next source we studied is the nearby FR-I M87. This source has been detected ! in gamma-rays and in the TeV band, but so far not in the hard X-rays (>10 keV). The first part of our analysis was focused on setting an upper limit to the hard X-ray emission of this source, using INTEGRAL IBIS/ISGRI observations. In addition to the standard method we applied several techniques in the analysis process, such as pointing selection and shadowgram treatment, in order to decrease the noise level of the result. Using 5.1 Ms of ISGRI data we determined a 3σ upper limit to the average 20-60 keV flux of f < 3x10^-12 erg/cm^2/s. We have also analysed Suzaku/PIN observations, where we detected M87 for the first time in the hard X-ray band, with a flux of f=1.3x 10^-11 erg/cm^2/s. between 20 and 60 keV. This detection indicates a flare, since the flux is significantly higher than the derived average upper limit. We also analysed Fermi/LAT data and combined this with the X-ray upper limits and historical radio, infrared and optical observations to build a SED. The SED can be modelled as a BL Lac source, which is expected since M87 is a FR-I type. We then also examined the general aspects of gamma-ray bright radio galaxies. Most of these objects are of the FR-I type, and the core of at least one FR-II, 3C 111, is rather BL Lac-like than the expected FSRQ. For the other FR-II sources this might also be the case. The gamma-ray emission originates from the jet, similar as in the case of blazars. Due to the large jet angle, the emission is not observed to be boosted. However, since the gamma-ray emission originates near the black hole, either reflection or a large opening angle can explain the observations. In addition, I contributed to the study of a possible dark matter halo observed with Fermi/LAT in the vicinity of the Virgo cluster. Our work has shown that a population of point sources contributes to this emission. In this thesis, the result of an extended emission analysis and the search for possible counter parts of new sources are presented. ! Finally, the detection of two new X-ray sources using Swift is reported here for the first time. These sources, the BL Lac object BZB J1552+0850 and the Seyfert galaxy LSBC F727-V01, are both located within the 95% error circle of the Fermi/LAT source 2FGL J1551.9+0855. We analysed the X-ray data from the XRT and UV data from the UVOT. The likely counterpart of the Fermi source is rather the blazer BZB J1552+0850, since Seyfert galaxies are rarely gamma-ray emitters. To understand the gamma-ray bright radio galaxies, X-ray observations can be used to can characterise these sources. Using for example the new generation of instruments, such as NuSTAR and ASTRO-H, will help with their superior resolution to distinguish between thermal and non-thermal emission in the X-ray spectrum. Additionally, building SEDs from simultaneous multi-wavelength observations will help constrain the broad-band emission. This will also help to pinpoint the counter part of Fermi/LAT detected sources, which is not trivial due to the large uncertainty in position

The remarkable AGN jets

NASA Astrophysics Data System (ADS)

Komissarov, Serguei

The jets from active galactic nuclei exhibit stability which seems to be far superior compared to that of terrestrial and laboratory jets. They manage to propagate over distances up to a billion of initial jet radii. Yet this may not be an indication of some exotic physics but mainly a reflection of the specific environment these jets propagate through. The key property of this environment is a rapid decline of density and pressure along the jet, which promotes its rapid expansion. Such an expansion can suppress global instabilities, which require communication across the jet, and hence ensure its survival over huge distances. At kpc scales, some AGN jets do show signs of strong instabilities and even turn into plumes. This could be a result of the flattening of the external pressure distribution in their host galaxies or inside the radio lobes. In this regard, we discuss the possible connection between the stability issue and the Fanaroff-Riley classification of extragalactic radio sources. The observations of AGN jets on sub-kpc scale do not seem to support their supposed lack of causal connectivity. When interpreted using simple kinematic models, they reveal a rather perplexing picture with more questions than answers on the jets dynamics.

In-vessel calibration of the imaging diagnostics for the real-time protection of the JET ITER-like wall.

PubMed

Huber, V; Huber, A; Kinna, D; Balboa, I; Collins, S; Conway, N; Drewelow, P; Maggi, C F; Matthews, G F; Meigs, A G; Mertens, Ph; Price, M; Sergienko, G; Silburn, S; Wynn, A; Zastrow, K-D

2016-11-01

The in situ absolute calibration of the JET real-time protection imaging system has been performed for the first time by means of radiometric light source placed inside the JET vessel and operated by remote handling. High accuracy of the calibration is confirmed by cross-validation of the near infrared (NIR) cameras against each other, with thermal IR cameras, and with the beryllium evaporator, which lead to successful protection of the JET first wall during the last campaign. The operation temperature ranges of NIR protection cameras for the materials used on JET are Be 650-1600 °C, W coating 600-1320 °C, and W 650-1500 °C.