A high-resolution temporal record of environmental changes in the Eastern Caribbean (Guadeloupe) from 40 to 10 ka BP

NASA Astrophysics Data System (ADS)

Royer, Aurélien; Malaizé, Bruno; Lécuyer, Christophe; Queffelec, Alain; Charlier, Karine; Caley, Thibaut; Lenoble, Arnaud

2017-01-01

In neotropical regions, fossil bat guano accumulated over time as laminated layers in caves, hence providing a high-resolution temporal record of terrestrial environmental changes. Additionally, cave settings have the property to preserve such organic sediments from processes triggered by winds (deflation, abrasion and sandblasting) and intense rainfall (leaching away). This study reports both stable carbon and nitrogen isotope compositions of frugivorous bat guano deposited in a well-preserved stratigraphic succession of Blanchard Cave on Marie-Galante, Guadeloupe. These isotopic data are discussed with regard to climate changes and its specific impact on Eastern Caribbean vegetation during the Late Pleistocene from 40 to 10 ka cal. BP. Guano δ13C values are higher than modern ones, suggesting noticeable vegetation changes. This provides also evidence for overall drier environmental conditions during the Pleistocene compared to today. Meanwhile, within this generally drier climate, shifts between wetter and drier conditions can be observed. Large temporal amplitudes in both δ13C and δ15N variations reaching up to 5.9‰ and 16.8‰, respectively, also indicate these oceanic tropical environments have been highly sensitive to regional or global climatic forcing. Stable isotope compositions of bat guano deposited from 40 to 35 ka BP, the Last Glacial Maximum and the Younger-Dryas reveal relatively wet environmental conditions whereas, at least from the end of the Heinrich event 1 and the Bølling period the region experienced drier environmental conditions. Nevertheless, when considering uncertainties in the model age, the isotopic record of Blanchard Cave show relatively similar variations with known proxy records from the northern South America and Central America, suggesting thus that the Blanchard Cave record is a robust proxy of past ITCZ migration. Teleconnections through global atmospheric pattern suggest that islands of the eastern Caribbean Basin could

Molecular Paleoclimate Reconstructions over the Last 9 ka from a Peat Sequence in South China

PubMed Central

Wang, Xinxin; Huang, Xianyu; Sachse, Dirk; Ding, Weihua; Xue, Jiantao

2016-01-01

To achieve a better understanding of Holocene climate change in the monsoon regions of China, we investigated the molecular distributions and carbon and hydrogen isotope compositions (δ13C and δD values) of long-chain n-alkanes in a peat core from the Shiwangutian (SWGT) peatland, south China over the last 9 ka. By comparisons with other climate records, we found that the δ13C values of the long-chain n-alkanes can be a proxy for humidity, while the δD values of the long-chain n-alkanes primarily recorded the moisture source δD signal during 9–1.8 ka BP and responded to the dry climate during 1.8–0.3 ka BP. Together with the average chain length (ACL) and the carbon preference index (CPI) data, the climate evolution over last 9 ka in the SWGT peatland can be divided into three stages. During the first stage (9–5 ka BP), the δ13C values were depleted and CPI and Paq values were low, while ACL values were high. They reveal a period of warm and wet climate, which is regarded as the Holocene optimum. The second stage (5–1.8 ka BP) witnessed a shift to relatively cool and dry climate, as indicated by the more positive δ13C values and lower ACL values. During the third stage (1.8–0.3 ka BP), the δ13C, δD, CPI and Paq values showed marked increase and ACL values varied greatly, implying an abrupt change to cold and dry conditions. This climate pattern corresponds to the broad decline in Asian monsoon intensity through the latter part of the Holocene. Our results do not support a later Holocene optimum in south China as suggested by previous studies. PMID:27505008

A 27cal ka biomarker-based record of ecosystem changes from lacustrine sediments of the Chihuahua Desert of Mexico

NASA Astrophysics Data System (ADS)

Chávez-Lara, C. M.; Holtvoeth, J.; Roy, P. D.; Pancost, R. D.

2018-07-01

Hydroclimate variation of the northwest Mexico during the late Pleistocene and Holocene is an active area of debate, with uncertainty in the nature and sources of precipitation. Previous research has inferred the influences of winter storms, summer monsoonal rain and autumn tropical cyclones. The impacts on regional and local ecosystems, however, are not well constrained. Here, we investigate the response of lacustrine and terrestrial habitats of the Santiaguillo Basin in the Chihuahua Desert (Mexico) to hydrological changes occurring since the late last glacial. Biomarkers from the sediments reflect variable input of organic matter (OM) from algal and bacterial biomass, aquatic microfauna and surrounding vegetation, revealing distinct stages of ecosystem adaption over the last 27 cal ka. Based on previously published and new data, we show that a perennial productive lake was present during the late glacial and it persisted until 17.5 cal ka BP. Coinciding with Heinrich event 1, OM supply from deteriorating wetland soils may have been caused by early dry conditions. Further phases of increasing aridity and a shrinking water body drove changing OM quality and biomarker composition during the early and mid-Holocene. A pronounced shift in biomarker distributions at 4 cal ka BP suggests that the supply of plant litter from resinous trees and grasses increased, likely reflecting the establishment of modern vegetation. Our results illustrate the potential of biomarker applications in the area, adding to the evidence of hydroclimate variability and enabling reconstructions of local ecosystem dynamics.

Pollen-based reconstruction of vegetational and climatic change over the past ~30 ka at Shudu Lake in the Hengduan Mountains of Yunnan, southwestern China.

PubMed

Yao, Yi-Feng; Song, Xiao-Yan; Wortley, Alexandra H; Wang, Yu-Fei; Blackmore, Stephen; Li, Cheng-Sen

2017-01-01

The Hengduan Mountains, with a distinct altitudinal differentiation and strong vertical vegetation zonation, occupy an important position in southwestern China as a global hotspot of biodiversity. Pollen analysis of lake sediments sampled along an altitudinal gradient in this region helps us to understand how this vegetation zonation arose and how it has responded to climate change and human impacts through time. Here we present a ~30-ka pollen record and interpret it in terms of vegetational and climatic change from a 310 cm-long core from Shudu Lake, located in the Hengduan Mountains region. Our results suggest that from 30 to 22 cal. ka BP, the vegetation was dominated by steppe/grassland (comprising mainly Artemisia, Poaceae and Polygonaceae) and broad-leaved forest (primarily Quercus, Betula and Castanopsis) in the lake catchment, reflecting a relatively warm, wet climate early in this phase and slightly warmer, drier conditions late in the phase. The period between 22 and 13.9 cal. ka BP was marked by a large expansion of needle- and broad-leaved mixed forest (Pinus, Abies and Quercus) and a decline in the extent of steppe/grassland, indicating warming, drying climatic conditions followed by a cold, wet period. Between 13.9 and 3 cal. ka BP, steppe/grassland expanded and the area covered by needle- and broad-leaved mixed forest reduced, implying a fluctuating climate dominated by warm and humid conditions. After 3 cal. ka BP, the vegetation was characterized by an increase in needle-leaved forest and reduction in steppe/grassland, suggesting warming and drying climate. A synthesis of palynological investigations from this and other sites suggests that the vegetation succession patterns seen along an altitudinal gradient in northwestern Yunnan since the Late Pleistocene are comparable, but that each site has its own characteristics probably due to the influences of altitude, topography, microclimate and human impact.

Blood pressure (BP) assessment-from BP level to BP variability.

PubMed

Feber, Janusz; Litwin, Mieczyslaw

2016-07-01

The assessment of blood pressure (BP) can be challenging in children, especially in very young individuals, due to their variable body size and lack of cooperation. In the absence of data relating BP with cardiovascular outcomes in children, there is a need to convert absolute BP values (in mmHg) into age-, gender- and height appropriate BP percentiles or Z-scores in order to compare a patient's BP with the BP of healthy children of the same age, but also of children of different ages. Traditionally, the interpretation of BP has been based mainly on the assessment of the BP level obtained by office, home or 24-h BP monitoring. Recent studies suggest that it is not only BP level (i.e. average BP) but also BP variability that is clinically important for the development of target organ damage, including the progression of chronic kidney disease. In this review we describe current methods to evaluate of BP level, outline available methods for BP variability assessment and discuss the clinical consequences of BP variability, including its potential role in the management of hypertension.

KaBOB: ontology-based semantic integration of biomedical databases.

PubMed

Livingston, Kevin M; Bada, Michael; Baumgartner, William A; Hunter, Lawrence E

2015-04-23

The ability to query many independent biological databases using a common ontology-based semantic model would facilitate deeper integration and more effective utilization of these diverse and rapidly growing resources. Despite ongoing work moving toward shared data formats and linked identifiers, significant problems persist in semantic data integration in order to establish shared identity and shared meaning across heterogeneous biomedical data sources. We present five processes for semantic data integration that, when applied collectively, solve seven key problems. These processes include making explicit the differences between biomedical concepts and database records, aggregating sets of identifiers denoting the same biomedical concepts across data sources, and using declaratively represented forward-chaining rules to take information that is variably represented in source databases and integrating it into a consistent biomedical representation. We demonstrate these processes and solutions by presenting KaBOB (the Knowledge Base Of Biomedicine), a knowledge base of semantically integrated data from 18 prominent biomedical databases using common representations grounded in Open Biomedical Ontologies. An instance of KaBOB with data about humans and seven major model organisms can be built using on the order of 500 million RDF triples. All source code for building KaBOB is available under an open-source license. KaBOB is an integrated knowledge base of biomedical data representationally based in prominent, actively maintained Open Biomedical Ontologies, thus enabling queries of the underlying data in terms of biomedical concepts (e.g., genes and gene products, interactions and processes) rather than features of source-specific data schemas or file formats. KaBOB resolves many of the issues that routinely plague biomedical researchers intending to work with data from multiple data sources and provides a platform for ongoing data integration and development and for

A 27 ka paleoenvironmental lake sediment record from Taro Co, central Tibetan Plateau: implications for the interplay between monsoon and the Westerlies

NASA Astrophysics Data System (ADS)

Wang, J.; Ma, Q.; Huang, L.; Ju, J.; Guo, Y.; Lin, X.; Li, Y.; Zhu, L.

2017-12-01

The climate of Tibetan Plateau (TP) is mainly influenced by the Indian Ocean Summer Monsoon (IOSM) and the Westerlies. The interaction of these two air masses is therefore a crucial scientific issue to understand how they impact the climate in this area, especially in the geological times. However, constrained by the available archives, researches on this topic are still very few in the hinterland of the TP, especially covering the Last Glacial Maximum (LGM) period. Here we present a new lake sediment record retrieved from Taro Co covering the last 27 ka to elucidate how the IOSM and the Westerlies interact and the possible mechanisms. Taro Co (486 km2, Dmax: 132m, 4565 m a.s.l., currently closed), located on the central TP, is a fresh lake with the major supply from glaciers. Two parallel piston cores as well as several gravity cores were retrieved from the deepest parts. These cores were correlated based on high resolution XRF scanning and a continuous 1069 cm-long core was finally integrated. Chronology was determined by 210Pb, 137Cs and AMS 14C measurements. Multidiscipline analyses including grain size, total organic carbon (TOC), total nitrogen, diatom, ostracod, pollen and n-alkanes were accomplished to reconstruct paleoenvironmental changes. The lake level of Taro Co was low since 27 cal ka BP indicated by very coarse materials and diatom assemblages with gradually increased temperature and salinity (TOC and carbonate getting higher). The terrestrial water input decreased continuously reflected by such elements as Si, Ti, Fe, K. It is likely that there was a sedimentation gap between 961-954cm, corresponding to 23.4 to 18.6 cal ka BP probably demonstrated Taro Co was very shallow at that period. The first prominent abrupt change of most proxies was observed at 14.7 cal ka BP showing a great lake deepening which likely indicated an enhancement of IOSM. There were several spells with abrupt changes of cold/warm stages before the Holocene and the Younger Dryas

The pKa Cooperative: A Collaborative Effort to Advance Structure-Based Calculations of pKa values and Electrostatic Effects in Proteins

PubMed Central

Nielsen, Jens E.; Gunner, M. R.; Bertrand García-Moreno, E.

2012-01-01

The pKa Cooperative http://www.pkacoop.org was organized to advance development of accurate and useful computational methods for structure-based calculation of pKa values and electrostatic energy in proteins. The Cooperative brings together laboratories with expertise and interest in theoretical, computational and experimental studies of protein electrostatics. To improve structure-based energy calculations it is necessary to better understand the physical character and molecular determinants of electrostatic effects. The Cooperative thus intends to foment experimental research into fundamental aspects of proteins that depend on electrostatic interactions. It will maintain a depository for experimental data useful for critical assessment of methods for structure-based electrostatics calculations. To help guide the development of computational methods the Cooperative will organize blind prediction exercises. As a first step, computational laboratories were invited to reproduce an unpublished set of experimental pKa values of acidic and basic residues introduced in the interior of staphylococcal nuclease by site-directed mutagenesis. The pKa values of these groups are unique and challenging to simulate owing to the large magnitude of their shifts relative to normal pKa values in water. Many computational methods were tested in this 1st Blind Prediction Challenge and critical assessment exercise. A workshop was organized in the Telluride Science Research Center to assess objectively the performance of many computational methods tested on this one extensive dataset. This volume of PROTEINS: Structure, Function, and Bioinformatics introduces the pKa Cooperative, presents reports submitted by participants in the blind prediction challenge, and highlights some of the problems in structure-based calculations identified during this exercise. PMID:22002877

WS-BP: An efficient wolf search based back-propagation algorithm

NASA Astrophysics Data System (ADS)

Nawi, Nazri Mohd; Rehman, M. Z.; Khan, Abdullah

2015-05-01

Wolf Search (WS) is a heuristic based optimization algorithm. Inspired by the preying and survival capabilities of the wolves, this algorithm is highly capable to search large spaces in the candidate solutions. This paper investigates the use of WS algorithm in combination with back-propagation neural network (BPNN) algorithm to overcome the local minima problem and to improve convergence in gradient descent. The performance of the proposed Wolf Search based Back-Propagation (WS-BP) algorithm is compared with Artificial Bee Colony Back-Propagation (ABC-BP), Bat Based Back-Propagation (Bat-BP), and conventional BPNN algorithms. Specifically, OR and XOR datasets are used for training the network. The simulation results show that the WS-BP algorithm effectively avoids the local minima and converge to global minima.

Excess warming in Central Europe after the 8.2 ka cold event: evidence from a varve-dated ostracod δ18O record from Mondsee (Austria)

NASA Astrophysics Data System (ADS)

Lauterbach, Stefan; Andersen, Nils; Erlenkeuser, Helmut; Danielopol, Dan L.; Namiotko, Tadeusz; Hüls, Matthias; Belmecheri, Soumaya; Nantke, Carla; Meyer, Hanno; Chapligin, Bernhard; von Grafenstein, Uli; Brauer, Achim

2017-04-01

As evidenced by numerous palaeoclimate records worldwide, the Holocene warm period has been punctuated by several short, low-amplitude cold episodes. Among these, the so-called 8.2 ka cold event represents a particularly prominent climate anomaly. Accordingly, several proxy-based and modeling studies have addressed its causal mechanisms, absolute dating, duration, amplitude, spatio-temporal characteristics and environmental consequences so far. However, knowledge about the dynamics and causes of subsequent climate recovery is still limited although this is essential for understanding rapid climate change. Here we present a new sub-decadally resolved and precisely dated oxygen isotope (δ18O) record for the interval 7.7-8.7 ka BP derived from benthic ostracods preserved in the varved lake sediments of pre-Alpine Mondsee (Austria), providing new insights into climate development around the 8.2 ka cold event in Central Europe. The high-resolution Mondsee δ18O record reveals the occurrence of a pronounced cold spell around 8.2 ka BP, whose amplitude (˜1.0 ‰ , equivalent to a 1.5-2.0 ˚ C cooling), total duration (151 years) and absolute dating (8231-8080 varve years BP, i.e. calendar years before AD 1950) agrees well with results from other Northern Hemisphere palaeoclimate archives, e.g. the Greenland ice cores. In addition, the Mondsee data set provides evidence for a 75-year-long δ18O overshoot directly following the 8.2 ka event (between 8080 and 8005 varve years BP), which is interpreted as a period of excess warming (about 0.5-0.6 ˚ C above the pre-8.2 ka event level) in Central Europe. Though so far not been explicitly described elsewhere, this observation is consistent with evidence from other proxy records in the North Atlantic realm, therefore likely reflecting a hemispheric-scale signal rather than a local phenomenon. As a possible trigger we suggest an enhanced resumption of the Atlantic meridional overturning circulation (AMOC), supporting

Uranium-series coral ages from the US Atlantic Coastal Plain-the "80 ka problem" revisited

USGS Publications Warehouse

Wehmiller, J. F.; Simmons, K.R.; Cheng, H.; Edwards, R. Lawrence; Martin-McNaughton, J.; York, L.L.; Krantz, D.E.; Shen, C.-C.

2004-01-01

Uranium series coral ages for emergent units from the passive continental margin US Atlantic Coastal Plain (ACP) suggest sea level above present levels at the end of marine oxygen isotope stage (MIS) 5, contradicting age-elevation relations based on marine isotopic or coral reef models of ice equivalent sea level. We have reexamined this problem by obtaining high precision 230Th/238U and 231Pa/235U thermal ionization mass spectrometric ages for recently collected and carefully cleaned ACP corals, many in situ. We recognize samples that show no evidence for diagenesis on the basis of uranium isotopic composition and age concordance. Combining new and earlier data, among those ages close to or within the age range of MIS 5, over 85% cluster between 65 and 85 ka BP. Of the corals that we have analyzed, those that show the least evidence for diagenesis on the basis of uranium isotopic composition and age concordance have ages between 80 and 85 ka BP, consistent with a MIS 5a correlation. The units from which these samples have been collected are all emergent and have elevations within ???3-5m of those few units where early stage 5 (???125,000 ka BP) coral ages have been obtained. The ACP appears to record an unusual history of relative sea level throughout MIS 5, a history that is also apparent in the dated coral record for Bermuda. We speculate that this history is related to the regional (near-to intermediate-field) effects of ancestral Laurentide Ice sheets on last interglacial shorelines of the western North Atlantic. ?? 2004 Elsevier Ltd and INQUA. All rights reserved.

A 20-ka reconstruction of a Sahelo-Sudanian paleoenvironment using multi-method dating on pedogenic carbonate

NASA Astrophysics Data System (ADS)

Diaz, Nathalie; Dietrich, Fabienne; King, Georgina E.; Valla, Pierre G.; Sebag, David; Herman, Frédéric; Verrecchia, Eric P.

2016-04-01

Soils can be precious environmental archives as they are open systems resulting from external persistent disturbance, or forcing (Jenny, 1941). Pedogenic carbonate nodules associated with clay-rich soils have been investigated in the Far North region of Cameroon in non-carbonate watersheds (Chad Basin). Nodule bearing soils have mima-like mound morphologies, within stream networks. Such settings raise questions on the processes leading to carbonate precipitation as well as landscape genesis. The mima-like mounds have been identified as degraded Vertisols, resulting from differential erosion induced by a former gilgai micro-relief (Diaz et al., 2016). Non-degraded Vertisols occur in waterlogged areas, located downstream from mima-like mound locations (Braband and Gavaud, 1985). Therefore during a former wetter period Vertisols may have been extended to the mima-like mound areas, followed by a shift toward drier conditions and erosion (Diaz et al., 2016). Consequently, mima-like mounds and associated carbonate nodules are inherited from climatic changes during the Late Pleistocene-Holocene period. The aim of this study is to validate the scenario above using the carbonate nodules collected in a mima-like mound as time archives. Optically stimulated luminescence (OSL) dating of K-feldspars trapped within the nodules is used to assess the deposition time of the soil parent material, composing the mima-like mounds. The carbonate and organic nodule parts have been radiocarbon dated with the aim of assessing the carbonate precipitation age and the age range of soil formation, respectively. Results show that the soil parent material was deposited between 18 ka and 12 ka BP and that the nodules precipitated between 7 ka and 5 ka BP. These results suggest that the deposition occurred during the arid climatic period of the Bossoumian (20 ka to 15 ka BP; Hervieu, 1970) and during the first drier part of the African Humid Period (14.8 ka to 11.5 ka BP; deMenocal et al., 2000

Timing of wet episodes in Atacama Desert over the last 15 ka. The Groundwater Discharge Deposits (GWD) from Domeyko Range at 25°S.

NASA Astrophysics Data System (ADS)

Sáez, Alberto; Godfrey, Linda V.; Herrera, Christian; Chong, Guillermo; Pueyo, Juan J.

2016-08-01

A chronologically robust reconstruction of timing and dynamics of millennial time scale wet episodes encompassing the entire Atacama Desert during the last 15 ka has been constructed. To accomplish this, a new composite paleoclimatic record from Groundwater Discharge Deposits (GWD) in the Sierra de Varas (Domeyko Range, southern Atacama in Chile at 25°S) has been compiled and compared with other published paleohydrologic records from the Atacama region. In Sierra de Varas (SV), three millennial timescale wet climate phases have been characterized: around 14.5 ka cal BP, 12.2-9.8 ka cal BP, and 4.7 ka cal BP to the present day. These wet phases are interpreted from intervals of GWD facies formed during periods when the springs were active. GWD facies include: (1) black organic peat, rooted mudstones and sandstones formed in local wetland environments, and (2) gypsum-carbonate rich layers formed by interstitial growth. GWD intervals alternate with gravelly alluvial material deposited during arid phases. A trend towards less humid conditions during the Late Holocene wet episode characterizes GWD sedimentary series in Sierra the Varas, suggesting the onset of a dry episode over the last few centuries. Around 0.7 ka BP a very short wet episode is recorded in the central part of the desert suggesting this was the time of maximum humidity for the entire late Holocene wet period. A brief arid phase occurred between 1.5 and 2.0 ka BP indicated by the absence of GWD in the Domeyko Range. The paleoclimatic reconstruction encompassing the entire Atacama region shows that both the intensity and occurrence of wetter conditions were governed mainly by the distance to the source of moisture, and secondarily by the elevation of the sites. In the northern Atacama (16-20°S), four wet phases fed by N-NE summer monsoon precipitations have been proposed: Tauca phase (18-14 ka cal BP) and Coipasa phase (13-10 ka cal BP) during the Late Glacial, followed by Early Holocene and Late

Biomarker reconstruction of phytoplankton productivity and community structure changes in the mud area southwest off Cheju Island during the past 9 ka

NASA Astrophysics Data System (ADS)

Wang, Z. C.; Xiao, X.; Yuan, Z. N.; Wang, F.; Xing, L.; Li, L.; Zhao, M.

2017-12-01

High-resolution biomarker records from the mud area southwest off Cheju Island in the East China Sea reveal the variabilities of the phytoplankton productivity and community structure during the past 9 ka. This area has undergone dramatic environmental changes during the last glacial cycle, as eustatic sea-level fluctuations resulting in major migration of the coastline. We use the brassicasterol, dinosterol and alkenones records in three sediment cores (B3-1: 31.62°N, 125.75°E; F10: 31.75°N, 126.11°E; F11: 31.88°N, 126.35°E) to reconstruct diatom community, dinoflagellate community and haptophyte community, respectively. The low content of alkenones and relative high contents of brassicasterol and dinosterol of the three sediment cores indicated that diatoms and dinoflagellates were the main marine productivity during the Holocene. The phytoplankton productivity was generally low during the early-Holocene (9-5 ka BP) because of the low input of nutrient. The phytoplankton productivity increased during the mid-Holocene (5-3 ka BP) in response to the upwelling which complemented the nutrient to the upper layer. High content of alkenones in F11 during this period caused by the establishment of the modern circulation pattern around 5-6 ka BP because the intrusion of the Yellow Sea Warm Current (YSWC) brought the high-temperature and high-salinity waters to the core site which provide the suitable living conditions for the haptophytes growth in the east of the mud area. In contrast, the decreased trend of alkenones in F11 around 4 ka BP revealed a weakened YSWC. During the late-Holocene (3-1 ka BP), the phytoplankton productivity showed increasing trend in three sediment cores. The inverse relationships of SST and brassicasterol/dinosterol between B3-1 and F11 indicated the migration of the cold center in this area during this time interval. The hydrology change resulted in a spatial difference in the mud area during the late Holocene.

Polymer-Based Black Phosphorus (bP) Hybrid Materials by in Situ Radical Polymerization: An Effective Tool To Exfoliate bP and Stabilize bP Nanoflakes

PubMed Central

2018-01-01

Black phosphorus (bP) has been recently investigated for next generation nanoelectronic multifunctional devices. However, the intrinsic instability of exfoliated bP (the bP nanoflakes) toward both moisture and air has so far overshadowed its practical implementation. In order to contribute to fill this gap, we report here the preparation of new hybrid polymer-based materials where bP nanoflakes (bPn) exhibit a significantly improved stability. The new materials have been prepared by different synthetic paths including: (i) the mixing of conventionally liquid-phase exfoliated bP (in dimethyl sulfoxide, DMSO) with poly(methyl methacrylate) (PMMA) solution; (ii) the direct exfoliation of bP in a polymeric solution; (iii) the in situ radical polymerization after exfoliating bP in the liquid monomer (methyl methacrylate, MMA). This last methodology concerns the preparation of stable suspensions of bPn–MMA by sonication-assisted liquid-phase exfoliation (LPE) of bP in the presence of MMA followed by radical polymerization. The hybrids characteristics have been compared in order to evaluate the bP dispersion and the effectiveness of the bPn interfacial interactions with polymer chains aimed at their long-term environmental stabilization. The passivation of the bPn is particularly effective when the hybrid material is prepared by in situ polymerization. By using this synthetic methodology, the nanoflakes, even if with a gradient of dispersion (size of aggregates), preserve their chemical structure from oxidation (as proved by both Raman and 31P-solid state NMR studies) and are particularly stable to air and UV light exposure. The feasibility of this approach, capable of efficiently exfoliating bP while protecting the bPn, has been then verified by using different vinyl monomers (styrene and N-vinylpyrrolidone), thus obtaining hybrids where the nanoflakes are embedded in polymer matrices with a variety of intriguing thermal, mechanical, and solubility characteristics.

Bayesian model aggregation for ensemble-based estimates of protein pKa values

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gosink, Luke J.; Hogan, Emilie A.; Pulsipher, Trenton C.

2014-03-01

This paper investigates an ensemble-based technique called Bayesian Model Averaging (BMA) to improve the performance of protein amino acid pmore » $$K_a$$ predictions. Structure-based p$$K_a$$ calculations play an important role in the mechanistic interpretation of protein structure and are also used to determine a wide range of protein properties. A diverse set of methods currently exist for p$$K_a$$ prediction, ranging from empirical statistical models to {\\it ab initio} quantum mechanical approaches. However, each of these methods are based on a set of assumptions that have inherent bias and sensitivities that can effect a model's accuracy and generalizability for p$$K_a$$ prediction in complicated biomolecular systems. We use BMA to combine eleven diverse prediction methods that each estimate pKa values of amino acids in staphylococcal nuclease. These methods are based on work conducted for the pKa Cooperative and the pKa measurements are based on experimental work conducted by the Garc{\\'i}a-Moreno lab. Our study demonstrates that the aggregated estimate obtained from BMA outperforms all individual prediction methods in our cross-validation study with improvements from 40-70\\% over other method classes. This work illustrates a new possible mechanism for improving the accuracy of p$$K_a$$ prediction and lays the foundation for future work on aggregate models that balance computational cost with prediction accuracy.« less

A 600-ka Arctic sea-ice record from Mendeleev Ridge based on ostracodes

USGS Publications Warehouse

Cronin, Thomas M.; Polyak, L.V.; Reed, D.; Kandiano, E. S.; Marzen, R. E.; Council, E. A.

2013-01-01

Arctic paleoceanography and sea-ice history were reconstructed from epipelagic and benthic ostracodes from a sediment core (HLY0503-06JPC, 800 m water depth) located on the Mendeleev Ridge, Western Arctic Ocean. The calcareous microfaunal record (ostracodes and foraminifers) covers several glacial/interglacial cycles back to estimated Marine Isotope Stage 13 (MIS 13, ∼500 ka) with an average sedimentation rate of ∼0.5 cm/ka for most of the stratigraphy (MIS 5–13). Results based on ostracode assemblages and an unusual planktic foraminiferal assemblage in MIS 11 dominated by a temperate-water species Turborotalita egelida show that extreme interglacial warmth, high surface ocean productivity, and possibly open ocean convection characterized MIS 11 and MIS 13 (∼400 and 500 ka, respectively). A major shift in western Arctic Ocean environments toward perennial sea ice occurred after MIS 11 based on the distribution of an ice-dwelling ostracode Acetabulastoma arcticum. Spectral analyses of the ostracode assemblages indicate sea ice and mid-depth ocean circulation in western Arctic Ocean varied primarily at precessional (∼22 ka) and obliquity (∼40 ka) frequencies.

Determination of pKa values of alendronate sodium in aqueous solution by piecewise linear regression based on acid-base potentiometric titration.

PubMed

Ke, Jing; Dou, Hanfei; Zhang, Ximin; Uhagaze, Dushimabararezi Serge; Ding, Xiali; Dong, Yuming

2016-12-01

As a mono-sodium salt form of alendronic acid, alendronate sodium presents multi-level ionization for the dissociation of its four hydroxyl groups. The dissociation constants of alendronate sodium were determined in this work by studying the piecewise linear relationship between volume of titrant and pH value based on acid-base potentiometric titration reaction. The distribution curves of alendronate sodium were drawn according to the determined pKa values. There were 4 dissociation constants (pKa 1 =2.43, pKa 2 =7.55, pKa 3 =10.80, pKa 4 =11.99, respectively) of alendronate sodium, and 12 existing forms, of which 4 could be ignored, existing in different pH environments.

Vegetation and Water Level Changes for the Northeast U.S. During the "8.2 ka Event"

NASA Astrophysics Data System (ADS)

Newby, P. E.; Donnelly, J. P.; Shuman, B.; MacDonald, D.

2006-12-01

Cool conditions, known as the "8.2 ka event", occurred between 8400 and 7900 cal yr B.P. in Greenland, Europe and elsewhere in the North Atlantic. The impact of this brief cool interval on local forests is recorded in radiocarbon-dated, high-resolution pollen stratigraphies for New Long Pond (41^{0}50'N, 70^{0}42'W) and Davis Pond (42^{0}30'N, 73^{0}19'W), Massachusetts. The vegetation response to the event is recorded differently for regions with contrasting soil types. At New Long Pond, the sandy outwash derived soils are associated with changes in jack/red, white and pitch pine populations, whereas the dominant changes in vegetation for the clay-rich, proglacial lake derived soils around Davis Pond are among oak, hemlock, and beech. At both sites, pollen evidence for the "8.2 ka event" may be easily overlooked within the more dominant regional pattern for the Northeast, which shows a shift from dry to moist conditions in conjunction with changes from predominantly white pine to oak with more mesic plant taxa between 9000 and 8000 cal yr B.P. At New Long Pond, the "8.2 ka event" is brief, preceded by a low-stand in water-level during the early Holocene and dominated by white pine pollen. After 9000 cal yr B.P., pitch pine with beech, maple, hop/hornbeam, elm and ash pollen indicate a mixed mesophytic forest. A radiocarbon-dated decrease in loss-on-ignition values at 8400 cal yr B.P., likely related to a drawdown in lake level, distinguishes the "8.2 event" and helps highlight subtle shifts in vegetation that favor colder and drier conditions than before the event. Following this brief episode, the pollen data indicate a return to warm and moist conditions until about 5600 years ago. At Davis Pond, increased oak and decreased hemlock pollen abundances, followed by an increase in beech pollen abundance is evident and show what may be the dominant regional pollen signature for the "8.2 ka event" in the Northest. This pattern is also recorded at nearby Berry and

Sea-level changes and shelf break prograding sequences during the last 400 ka in the Aegean margins: Subsidence rates and palaeogeographic implications

NASA Astrophysics Data System (ADS)

Lykousis, V.

2009-09-01

The subsidence rates of the Aegean margins during the Middle-Upper Pleistocene were evaluated based on new and historical seismic profiling data. High-resolution seismic profiling (AirGun, Sparker and 3.5 kHz) have shown that (at least) four major oblique prograding sequences can be traced below the Aegean marginal slopes at increasing subbottom depths. These palaeo-shelf break glacial delta sediments have been developed during successive low sea-level stands (LST prograding sequences), suggesting continuous and gradual subsidence of the Aegean margins during the last 400 ka. Subsidence rates of the Aegean margins were calculated from the vertical displacement of successive topset-to-foreset transitions (palaeo-shelf break) of the LST prograding sediment sequences. The estimated subsidence rates that were calculated in the active boundaries of the Aegean microplate (North Aegean margins, Gulfs of Patras and Corinth) are high and range from 0.7 to 1.88 m ka -1, while the lowest values (0.34-0.60 m ka -1) are related to the low tectonic and seismic activity margins like the margin of Cyclades plateau. Lower subsidence rates (0.34-0.90 m ka -1) were estimated for the period 146-18 ka BP (oxygen isotopic stages 6-2) and higher (1.46-1.88 m ka -1) for the period from 425 to 250 ka BP (oxygen isotopic stages 12/10-8). A decrease of about 50% of the subduction rates in the Aegean margins was observed during the last 400 ka. During the isotopic stages 8, 10, 11 and 12, almost the 50-60% of the present Aegean Sea was land with extensive drainage systems and delta plains and large lakes in the central and North Aegean. Marine transgression in the North Aegean was rather occurred during the isotopic 9 interglacial period. The estimated palaeomorphology should imply fan delta development and sediment failures in the steep escarpments of the North Aegean margins and high sedimentation rates and turbidite sediment accumulation in the basins. It is deduced that the Black Sea was

The Mars Global Surveyor Ka-Band Link Experiment (MGS/KaBLE-II)

NASA Astrophysics Data System (ADS)

Morabito, D.; Butman, S.; Shambayati, S.

1999-01-01

The Mars Global Surveyor (MGS) spacecraft, launched on November 7, 1996, carries an experimental space-to-ground telecommunications link at Ka-band (32 GHz) along with the primary X-band (8.4-GHz) downlink. The signals are simultaneously transmitted from a 1.5-m-diameter parabolic antenna on MGS and received by a beam-waveguide (BWG) research and development (R&D) 34-meter a ntenna located in NASA's Goldstone Deep Space Network (DSN) complex near Barstow, California. This Ka-band link experiment (KaBLE-II) allows the performances of the Ka-band and X-band signals to be compared under nearly identical conditions. The two signals have been regularly tracked during the past 2 years. This article presents carrier-signal-level data (P_c/N_o) for both X-band and Ka-band acquired over a wide range of station elevation angles, weather conditions, and solar elongation angles. The cruise phase of the mission covered the period from launch (November 7, 1996) to Mars orbit capture (September 12, 1997). Since September 12, 1997, MGS has been in orbit around Mars. The measurements confirm that Ka-band could increase data capacity by at least a factor of three (5 dB) as compared with X-band. During May 1998, the solar corona experiment, in which the effects of solar plasma on the X-band and Ka-band links were studied, was conducted. In addition, frequency and difference frequency (f_x - f_(Ka)/3.8), ranging, and telemetry data results are presented. MGS/KaBLE-II measured signal strengths (for 54 percent of the experiments conducted) that were in reasonable agreement with predicted values based on preflight knowledge, and frequency residuals that agreed between bands and whose statistics were consistent with expected noise sources. For passes in which measured signal strengths disagreed with predicted values, the problems were traced to known deficiencies, for example, equipment operating under certain conditions, such as a cold Ka-band solid-state power amplifier (SSPA

Predicting the pKa and stability of organic acids and bases at an oil-water interface.

PubMed

Andersson, M P; Olsson, M H M; Stipp, S L S

2014-06-10

We have used density functional theory and the implicit solvent model, COSMO-RS, to investigate how the acidity constant, pKa, of organic acids and bases adsorbed at the organic compound-aqueous solution interface changes, compared to its value in the aqueous phase. The pKa determine the surface charge density of the molecules that accumulate at the fluid-fluid interface. We have estimated the pKa by comparing the stability of the protonated and unprotonated forms of a series of molecules in the bulk aqueous solution and at an interface where parts of each molecule reside in the hydrophobic phase and the rest remains in the hydrophilic phase. We found that the pKa for acids is shifted by ∼1 pH unit to higher values compared to the bulk water pKa, whereas they are shifted to lower values by a similar amount for bases. Because this pKa shift is similar in magnitude for each of the molecules studied, we propose that the pKa for molecules at a water-organic compound interface can easily be predicted by adding a small shift to the aqueous pKa. This shift is general and correlates with the functional group. We also found that the relative composition of molecules at the fluid-fluid interface is not the same as in the bulk. For example, species such as carboxylic acids are enriched at the interface, where they can dominate surface properties, even when they are a modest component in the bulk fluid. For high surface concentrations of carboxylic acid groups at an interface, such as a self-assembled monolayer, we have demonstrated that the pKa depends on the degree of deprotonation through direct hydrogen bonding between protonated and deprotonated acidic headgroups.

Maximizing MST's inductive capability with a Bp programmable power supply

NASA Astrophysics Data System (ADS)

Chapman, B. E.; Holly, D. J.; Jacobson, C. M.; McCollam, K. J.; Morin, J. C.; Sarff, J. S.; Squitieri, A.

2016-10-01

A major goal of the MST program is the advancement of inductive control for the development of both the RFP's fusion potential and, synergistically, the predictive capability of fusion science. This entails programmable power supplies (PPS's) for the Bt and Bp circuits. A Bt PPS is already in place, allowing advanced RFP operation and the production of tokamak plasmas, and a Bp PPS prototype is under construction. To explore some of the new capabilities to be provided by the Bp PPS, the existing Bt PPS has been temporarily connected to the Bp circuit. One key result is new-found access to very low Ip (20 kA) and very low Lundquist number, S (104). At this low S, simulation of RFP plasmas with the MHD code NIMROD is readily achievable, and work toward validation of extended MHD models using NIMROD is underway with direct comparisons to these MST plasmas. The full Bp PPS will also provide higher Ip and S than presently possible, allowing MST to produce plasmas with S spanning as much as five orders of magnitude, a dramatic extension of MST's capability. In these initial tests, the PPS has also increased five-fold MST's Ip flattop duration, to about 100 ms. This, coupled with the recently demonstrated PPS ability to drive large-amplitude sinusoidal oscillations in Ip, will allow tests of extended-duration oscillating field current drive, the goal of which is ac sustainment of a quasi-dc plasma current. Work supported by US DOE.

78 FR 60270 - BP America Inc., BP Corporation North America Inc., BP America Production Company, and BP Energy...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-01

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Docket No. IN13-15-000] BP America Inc., BP Corporation North America Inc., BP America Production Company, and BP Energy Company; Notice of Designation of Commission Staff as Non-Decisional With respect to an order issued by the Commission on August...

New Insights into the 8.2 ka Cold Event and Subsequent Climate Recovery in Central Europe Provided by a Precisely Dated Ostracod δ18O Record from Mondsee (Austria)

NASA Astrophysics Data System (ADS)

Lauterbach, S.; Andersen, N.; Brauer, A.; Erlenkeuser, H.; Danielopol, D. L.; Namiotko, T.; Huels, M.; Belmecheri, S.; Nantke, C.; Meyer, H.; Chapligin, B.; von Grafenstein, U.

2015-12-01

As evidenced by numerous palaeoclimate records worldwide, the Holocene warm period has been interrupted by several short, low-amplitude cold episodes. Among these, the so-called 8.2 ka cold event is the most prominent Holocene climate perturbation but despite extensive studies, knowledge about its synchrony in different areas and particularly about the dynamics of subsequent climate recovery is still limited. As this is of crucial importance for understanding the complex mechanisms that trigger rapid climate fluctuations and for testing the performance of climate models, new data on the 8.2 ka cold event are needed. Here we present a new sub-decadally resolved, precisely dated oxygen isotope (δ18O) record for the interval 7.7-8.7 ka BP obtained from benthic ostracods preserved in the varved lake sediments of Mondsee (Austria), providing new insights into climate development around the 8.2 ka cold event in Central Europe. The new high-resolution δ18O data set reveals the occurrence of a pronounced cold spell around 8.2 ka BP, whose amplitude (~1.0 ‰, equivalent to a 1.5-2.0 °C cooling), total duration (151 a) and absolute dating (8231-8080 a BP, i.e. calendar years before AD 1950) perfectly agree with results from other Northern Hemisphere palaeoclimate archives, e.g. the precisely dated Greenland ice cores. In addition, the Mondsee δ18O record also indicates a 75-year-long air temperature overshoot of ~0.7 °C directly after the 8.2 ka event (between 8080 and 8005 a BP), which is so far only poorly documented in the mid-latitudes. However, this observation is consistent with results from coupled climate models and high-latitude proxy records, thus likely reflecting a hemispheric-scale climate signal driven by enhanced resumption of the Atlantic meridional overturning circulation (AMOC), which apparently also caused synchronous migrations of atmospheric and oceanic front systems in the North Atlantic realm.

Origin and fate of sedimentary organic matter in the northern Bay of Bengal during the last 18 ka

NASA Astrophysics Data System (ADS)

Contreras-Rosales, L. A.; Schefuß, E.; Meyer, V.; Palamenghi, L.; Lückge, A.; Jennerjahn, T. C.

2016-11-01

The Northern Bay of Bengal (NBoB) is a globally important region for deep-sea organic matter (OM) deposition due to massive fluvial discharge from the Ganges-Brahmaputra-Meghna (G-B-M) rivers and moderate to high surface productivity. Previous studies have focused on carbon burial in turbiditic sediments of the Bengal Fan. However, little is known about the storage of carbon in pelagic and hemipelagic sediments of the Bay of Bengal over millennial time scales. This study presents a comprehensive history of OM origin and fate as well as a quantification of carbon sediment storage in the Eastern Bengal Slope (EBS) during the last 18 ka. Bulk organic proxies (TOC, TIC, TN, δ13CTOC, δ15NTN) and content and composition of total hydrolysable amino acids (THAA) in a sediment core (SO188-342KL) from the EBS were analyzed. Three periods of high OM accumulation were identified: the Late Glacial (LG), the Bölling/Alleröd (B/A), and the Early Holocene Climatic Optimum (EHCO). Lower eustatic sea level before 15 ka BP allowed a closer connection between the EBS and the fluvial debouch, favoring high terrestrial OM input to the core site. This connection was progressively lost between 15 and 7 ka BP as sea level rose to its present height and terrestrial OM input decreased considerably. Export and preservation of marine OM was stimulated during periods of summer monsoon intensification (B/A and EHCO) as a consequence of higher surface productivity enhanced by cyclonic-eddy nutrient pumping and fluvial nutrient delivery into the photic zone. Changes in the THAA composition indicate that the marine plankton community structure shifted from calcareous-dominated before 13 ka BP to siliceous-dominated afterwards. They also indicate that the relative proportion of marine versus terrestrial OM deposited at site 342KL was primarily driven by relative sea level and enlarged during the Holocene. The ballasting effect of lithogenic particles during periods of high coastal proximity and

Evidence of resilience to past climate change in Southwest Asia: Early farming communities and the 9.2 and 8.2 ka events

NASA Astrophysics Data System (ADS)

Flohr, Pascal; Fleitmann, Dominik; Matthews, Roger; Matthews, Wendy; Black, Stuart

2016-03-01

Climate change is often cited as a major factor in social change. The so-called 8.2 ka event was one of the most pronounced and abrupt Holocene cold and arid events. The 9.2 ka event was similar, albeit of a smaller magnitude. Both events affected the Northern Hemisphere climate and caused cooling and aridification in Southwest Asia. Yet, the impacts of the 8.2 and 9.2 ka events on early farming communities in this region are not well understood. Current hypotheses for an effect of the 8.2 ka event vary from large-scale site abandonment and migration (including the Neolithisation of Europe) to continuation of occupation and local adaptation, while impacts of the 9.2 ka have not previously been systematically studied. In this paper, we present a thorough assessment of available, quality-checked radiocarbon (14C) dates for sites from Southwest Asia covering the time interval between 9500 and 7500 cal BP, which we interpret in combination with archaeological evidence. In this way, the synchronicity between changes observed in the archaeological record and the rapid climate events is tested. It is shown that there is no evidence for a simultaneous and widespread collapse, large-scale site abandonment, or migration at the time of the events. However, there are indications for local adaptation. We conclude that early farming communities were resilient to the abrupt, severe climate changes at 9250 and 8200 cal BP.

Simulating vegetation dynamics in Chile from 21ka BP to present: Effects of climate change on vegetation functions and cover

NASA Astrophysics Data System (ADS)

Werner, Christian; Liakka, Johan; Schmid, Manuel; Fuentes, Juan-Pablo; Ehlers, Todd A.; Hickler, Thomas

2017-04-01

Vegetation composition and establishment is strongly dependent on climate conditions but also a result of vegetation dynamics (competition for light, water and nutrients). In addition, vegetation exerts control over the development of landscapes as it mediates the climatic and hydrological forces shaping the terrain via hillslope and fluvial processes. At the same time, topography as well as soil texture and soil depth affect the microclimate, soil water storage and rooting space that is defining the environmental envelope for vegetation development. Within the EarthShape research program (www.earthshape.net) we evaluate these interactions by simulating the co-evolution of landscape and vegetation with a dynamic vegetation model (LPJ-GUESS) and a landscape evolution model (LandLab). LPJ-GUESS is a mechanistic model driven by daily or monthly weather data and explicitly simulates vegetation physiology, succession, competition and water and nutrient cycling. Here we present the results of first transient vegetation simulations from 21kyr BP to present-day using the TraCE-21ka climate dataset for four focus sites along the coastal cordillera of Chile that are exposed to a substantial meridional climate gradient (ranging from hyper-arid to humid-temperate conditions). We show that the warming occurring in the region from LGM to present, in addition to the increase of atmospheric CO2 concentrations, led to a shift in vegetation composition and surface cover. Future work will show how these changes resonate in the dynamics of hillslope and fluvial erosion and ultimately bi-directional feedback mechanisms of vegetation development and landscape evolution/ soil formation (see also companion presentation by Schmid et al., this session).

Palaeoenvironmental Transitions Between 22 ka and 8 ka in Monsoonally Influenced Namibia

NASA Astrophysics Data System (ADS)

Eitel, Bernhard; Blümel, Wolf Dieter; Hüser, Klaus

The paper presents a preliminary reconstruction of the development of different palaeoenvironments between the Last Glacial Maximum (LGM; c. 22 - 18 ka) and the Holocene Altithermal (HA; c. 8 ka - 4 ka) in Namibia. The synopsis is based on 36 optical datations of dune sands and fine-grained, silty deposits (OSL and TL). Most of the data were published by different research groups during the last decade. The synoptic view of all available optical age determinations is necessary because palaeoclimatic interpretations for southwestern Africa are not possible using results based only on local studies and on partly unreliable datations (e. g. 14C ages of calcretes). The compilation of all available datations and a synoptical interpretation such as the one presented here, show that gradual transitions and not abrupt changes from arid to more humid conditions occurred. These transitions did not affect all regions of Namibia at the same time and intensity. Differentiations in time and space are necessary for arriving a consistent model of the palaeoenvironmental transitions between LGM and HA.

pKa predictions for proteins, RNAs, and DNAs with the Gaussian dielectric function using DelPhi pKa.

PubMed

Wang, Lin; Li, Lin; Alexov, Emil

2015-12-01

We developed a Poisson-Boltzmann based approach to calculate the pKa values of protein ionizable residues (Glu, Asp, His, Lys and Arg), nucleotides of RNA and single stranded DNA. Two novel features were utilized: the dielectric properties of the macromolecules and water phase were modeled via the smooth Gaussian-based dielectric function in DelPhi and the corresponding electrostatic energies were calculated without defining the molecular surface. We tested the algorithm by calculating pKa values for more than 300 residues from 32 proteins from the PPD dataset and achieved an overall RMSD of 0.77. Particularly, the RMSD of 0.55 was achieved for surface residues, while the RMSD of 1.1 for buried residues. The approach was also found capable of capturing the large pKa shifts of various single point mutations in staphylococcal nuclease (SNase) from pKa-cooperative dataset, resulting in an overall RMSD of 1.6 for this set of pKa's. Investigations showed that predictions for most of buried mutant residues of SNase could be improved by using higher dielectric constant values. Furthermore, an option to generate different hydrogen positions also improves pKa predictions for buried carboxyl residues. Finally, the pKa calculations on two RNAs demonstrated the capability of this approach for other types of biomolecules. © 2015 Wiley Periodicals, Inc.

pKa of fentanyl varies with temperature: implications for acid-base management during extremes of body temperature.

PubMed

Thurlkill, Richard L; Cross, David A; Scholtz, J Martin; Pace, C Nick

2005-12-01

The pKa of fentanyl has not been measured previously at varying extremes of body temperature. The goal of this laboratory investigation was to test the hypothesis that the pKa of fentanyl changes with temperature. The investigation involved measuring the pKa values of aqueous fentanyl at varying temperatures. The investigation was conducted in a controlled laboratory environment. No human or animal subjects were involved. Because no live subjects were involved in the investigation, no interventions were necessary. This paper reports the effect of temperature on the pKa of fentanyl. The pKa of aqueous fentanyl was measured at 15 degrees C, 25 degrees C, 37 degrees C, 42 degrees C, and 47.5 degrees C by potentiometric titration in 0.01 mmol/L of potassium chloride after extensive degassing. Data were analyzed using the least squares method with an appropriately fitting equation. The pKa of fentanyl was found to change in a similar manner to the neutral point of water at varying temperatures. This finding has implications for the bioavailability of fentanyl at extremes of body temperature in association with the clinical acid-base management of the patient. Clinical implications for differing methods of intraoperative acid-base management at varying temperatures are discussed.

A 150-ka-long record for the volcano-tectonic deformation of Central Anatolian Volcanic Province

NASA Astrophysics Data System (ADS)

Karabacak, Volkan; Tonguç Uysal, I.; Ünal-İmer, Ezgi; Mutlu, Halim; Zhao, Jian-xin

2017-04-01

The Anatolian Block represents one of the most outstanding examples of intra-plate deformation related to continental collision. Deformation related to the convergence of the Afro-Arabian continent toward north gives rise to widespread and intense arc volcanism in the Central Anatolia. All the usual studies on dating the volcano-tectonic deformation of the region are performed entirely on volcanic events of the geological record resulted in eruptions. However, without volcanic eruption, magma migration and related fluid pressurization also generate crustal deformation. In the current study has been funded by the Scientific and Technological Research Council of Turkey with the project no. 115Y497, we focused on fracture systems and their carbonate veins around the Ihlara Valley (Cappadocia) surrounded by well-known volcanic centers with latest activities of the southern Central Anatolian Volcanic Province. We dated 37 samples using the Uranium-series technique and analyzed their isotope systematics from fissure veins, which are thought to be controlled by the young volcanism in the region. Our detailed fracture analyses in the field show that there is a regional dilatation as a result of a NW-SE striking extension which is consistent with the results of recent GPS studies. The Uranium-series results indicate that fracture development and associated carbonate vein deposition occurred in the last 150 ka. Carbon and oxygen isotope systematics have almost remained unchanged in the studied time interval. Although veins in the region were precipitated from fluids primarily of meteoric origin, fluids originating from water-rock interaction also contribute for the deposition of carbonate veins. The age distribution indicates that the crustal deformation intensified during 7 different period at about 4.7, 34, 44, 52, 83, 91, 149 ka BP. Four of these periods (4.7, 34, 91, 149 ka BP) correspond to the volcanic activities suggested in the previous studies. The three crustal

Research on Environmental Adjustment of Cloud Ranch Based on BP Neural Network PID Control

NASA Astrophysics Data System (ADS)

Ren, Jinzhi; Xiang, Wei; Zhao, Lin; Wu, Jianbo; Huang, Lianzhen; Tu, Qinggang; Zhao, Heming

2018-01-01

In order to make the intelligent ranch management mode replace the traditional artificial one gradually, this paper proposes a pasture environment control system based on cloud server, and puts forward the PID control algorithm based on BP neural network to control temperature and humidity better in the pasture environment. First, to model the temperature and humidity (controlled object) of the pasture, we can get the transfer function. Then the traditional PID control algorithm and the PID one based on BP neural network are applied to the transfer function. The obtained step tracking curves can be seen that the PID controller based on BP neural network has obvious superiority in adjusting time and error, etc. This algorithm, calculating reasonable control parameters of the temperature and humidity to control environment, can be better used in the cloud service platform.

pKa cycling of the general acid/base in glycoside hydrolase families 33 and 34.

PubMed

Yu, Haibo; Griffiths, Thomas M

2014-03-28

Glycoside hydrolase families 33 and 34 catalyse the hydrolysis of terminal sialic acid residues from sialyl oligosaccharides and glycoconjugates with a net retention of the stereochemistry at the anomeric centre. It is generally believed that the conserved aspartic acid in the active site functions as a general acid to protonate the hydroxyl group of the departing aglycone during glycosylation, and then as a general base to facilitate the nucleophilic attack of the water molecule on the intermediate state during the deglycosylation reaction. The dual role of the general acid/base places specific demands upon its protonation state, and thus pKa values. However, it is not fully understood how this catalytic residue can achieve such pKa cycling during catalysis. We present both MM and combined QM/MM simulations to characterise the pKa values of the proposed catalytic general acid/base in the glycoside hydrolase families 33 and 34. Collectively, our study suggests that the binding of anionic substrates and the local solvation properties along with the neutralisation of the nearby glutamic acid upon glycosylation modulate the electrostatic environment around the general acid/base to achieve its proper protonation states.

The IUPAC aqueous and non-aqueous experimental pKa data repositories of organic acids and bases.

PubMed

Slater, Anthony Michael

2014-10-01

Accurate and well-curated experimental pKa data of organic acids and bases in both aqueous and non-aqueous media are invaluable in many areas of chemical research, including pharmaceutical, agrochemical, specialty chemical and property prediction research. In pharmaceutical research, pKa data are relevant in ligand design, protein binding, absorption, distribution, metabolism, elimination as well as solubility and dissolution rate. The pKa data compilations of the International Union of Pure and Applied Chemistry, originally in book form, have been carefully converted into computer-readable form, with value being added in the process, in the form of ionisation assignments and tautomer enumeration. These compilations offer a broad range of chemistry in both aqueous and non-aqueous media and the experimental conditions and original reference for all pKa determinations are supplied. The statistics for these compilations are presented and the utility of the computer-readable form of these compilations is examined in comparison to other pKa compilations. Finally, information is provided about how to access these databases.

The IUPAC aqueous and non-aqueous experimental pKa data repositories of organic acids and bases

NASA Astrophysics Data System (ADS)

Slater, Anthony Michael

2014-10-01

Accurate and well-curated experimental pKa data of organic acids and bases in both aqueous and non-aqueous media are invaluable in many areas of chemical research, including pharmaceutical, agrochemical, specialty chemical and property prediction research. In pharmaceutical research, pKa data are relevant in ligand design, protein binding, absorption, distribution, metabolism, elimination as well as solubility and dissolution rate. The pKa data compilations of the International Union of Pure and Applied Chemistry, originally in book form, have been carefully converted into computer-readable form, with value being added in the process, in the form of ionisation assignments and tautomer enumeration. These compilations offer a broad range of chemistry in both aqueous and non-aqueous media and the experimental conditions and original reference for all pKa determinations are supplied. The statistics for these compilations are presented and the utility of the computer-readable form of these compilations is examined in comparison to other pKa compilations. Finally, information is provided about how to access these databases.

Ka Band Objects: Observation and Monitoring (KaBOOM)

NASA Astrophysics Data System (ADS)

Geldzahler, B.

2012-09-01

NASA has embarked on a path that will enable the implementation of a high power, high resolution X/Ka band radar system using widely spaced 12m antennas to better track and characterize near Earth objects and orbital debris. This radar system also has applications for cost effective space situational awareness. We shall demonstrate Ka band coherent uplink arraying with real-time atmospheric compensation using three 12m antennas at the Kennedy Space Center (KSC). Our proposed radar system can complement and supplement the activities of the Space Fence. The proposed radar array has the advantages of filling the gap between dusk and dawn and offers the possibility of high range resolution (4 cm) and high spatial resolution (?10 cm at GEO) when used in a VLBI mode. KSC was chosen because [a] of reduced implementation costs, [b] there is a lot of water vapor in the air (not Ka band friendly), and [c] the test satellites have a low elevation adding more attenuation and turbulence to the demonstration. If Ka band coherent uplink arraying can be made to work at KSC, it will work anywhere. We expect to rebaseline X-band in 2013, and demonstrate Ka band uplink arraying in 2014.

Improving BP control through electronic communications: an economic evaluation.

PubMed

Fishman, Paul A; Cook, Andrea J; Anderson, Melissa L; Ralston, James D; Catz, Sheryl L; Carrell, David; Carlson, James; Green, Beverly B

2013-09-01

Web-based collaborative approaches to managing chronic illness show promise for both improving health outcomes and increasing the efficiency of the healthcare system. Analyze the cost-effectiveness of the Electronic Communications and Home Blood Pressure Monitoring to Improve Blood Pressure Control (e-BP) study, a randomized controlled trial that used a patient-shared electronic medical record, home blood pressure (BP) monitoring, and web-based pharmacist care to improve BP control (<140/90 mm Hg). Incremental cost-effectiveness analysis conducted from a health plan perspective. Cost-effectiveness of home BP monitoring and web-based pharmacist care estimated for percent change in patients with controlled BP and cost per mm Hg in diastolic and systolic BP relative to usual care and home BP monitoring alone. A 1% improvement in number of patients with controlled BP using home BP monitoring and web-based pharmacist care-the e-BP program-costs $16.65 (95% confidence interval: 15.37- 17.94) relative to home BP monitoring and web training alone. Each mm HG reduction in systolic and diastolic BP achieved through the e-BP program costs $65.29 (59.91-70.67) relativeto home BP monitoring and web tools only. Life expectancy was increased at an incremental cost of $1850 (1635-2064) and $2220 (1745-2694) per year of life saved for men and women, respectively. Web-based collaborative care can be used to achieve BP control at a relatively low cost. Future research should examine the cost impact of potential long-term clinical improvements.

Holocene thermal optimal and climate variability of East Asian monsoon inferred from forest reconstruction of a subalpine pollen sequence, Taiwan

NASA Astrophysics Data System (ADS)

Liew, P. M.; Lee, C. Y.; Kuo, C. M.

2006-10-01

The East Asian monsoon Holocene optimal period has been debated both about duration and whether conditions were a maximum in thermal conditions or in precipitation. In this study we show Holocene climate variability inferred by a forest reconstruction of a subalpine pollen sequence from peat bog deposits in central Taiwan, based on modern analogues of various altitudinal biomes in the region. A warmer interval occurred between 8 and 4 ka BP (calibrated 14C years) when the subtropical forests were more extensive. The Holocene thermal optimum is represented by an altitudinal tropical forest at 6.1-5.9 ka BP and 6.9 ka BP and only the latter was accompanied by wet conditions, indicating decoupling of thermal and precipitation mechanism in the middle Holocene. Abrupt and relative severe cold phases, shown by biome changes, occurred at about 11.2-11.0 ka BP; 7.5 ka BP; 7.2 ka BP; 7.1 ka BP; 5.2 ka BP, 5.0 ka BP and 4.9 ka BP. A spectral analysis of pollen of a relatively cold taxon — Salix, reveals that the time series is dominated by a 1500 yr periodicity and similar to the cold cycle reported in the marine records of Indian and western Pacific Oceans. The cold-warm conditions inferred by the change of forests show close relationship to solar energy in comparison with the production rate of Be-10.

Prediction of Industrial Electric Energy Consumption in Anhui Province Based on GA-BP Neural Network

NASA Astrophysics Data System (ADS)

Zhang, Jiajing; Yin, Guodong; Ni, Youcong; Chen, Jinlan

2018-01-01

In order to improve the prediction accuracy of industrial electrical energy consumption, a prediction model of industrial electrical energy consumption was proposed based on genetic algorithm and neural network. The model use genetic algorithm to optimize the weights and thresholds of BP neural network, and the model is used to predict the energy consumption of industrial power in Anhui Province, to improve the prediction accuracy of industrial electric energy consumption in Anhui province. By comparing experiment of GA-BP prediction model and BP neural network model, the GA-BP model is more accurate with smaller number of neurons in the hidden layer.

Research of converter transformer fault diagnosis based on improved PSO-BP algorithm

NASA Astrophysics Data System (ADS)

Long, Qi; Guo, Shuyong; Li, Qing; Sun, Yong; Li, Yi; Fan, Youping

2017-09-01

To overcome those disadvantages that BP (Back Propagation) neural network and conventional Particle Swarm Optimization (PSO) converge at the global best particle repeatedly in early stage and is easy trapped in local optima and with low diagnosis accuracy when being applied in converter transformer fault diagnosis, we come up with the improved PSO-BP neural network to improve the accuracy rate. This algorithm improves the inertia weight Equation by using the attenuation strategy based on concave function to avoid the premature convergence of PSO algorithm and Time-Varying Acceleration Coefficient (TVAC) strategy was adopted to balance the local search and global search ability. At last the simulation results prove that the proposed approach has a better ability in optimizing BP neural network in terms of network output error, global searching performance and diagnosis accuracy.

Deep-Space Ka-Band Flight Experience

NASA Astrophysics Data System (ADS)

Morabito, D. D.

2017-11-01

Lower frequency bands have become more congested in allocated bandwidth as there is increased competition between flight projects and other entities. Going to higher frequency bands offers significantly more bandwidth, allowing for the use of much higher data rates. However, Ka-band is more susceptible to weather effects than lower frequency bands currently used for most standard downlink telemetry operations. Future or prospective flight projects considering deep-space Ka-band (32-GHz) telemetry data links have expressed an interest in understanding past flight experience with received Ka-band downlink performance. Especially important to these flight projects is gaining a better understanding of weather effects from the experience of current or past missions that operated Ka-band radio systems. We will discuss the historical flight experience of several Ka-band missions starting from Mars Observer in 1993 up to present-day deep-space missions such as Kepler. The study of historical Ka-band flight experience allows one to recommend margin policy for future missions. Of particular interest, we will review previously reported-on flight experience with the Cassini spacecraft Ka-band radio system that has been used for radio science investigations as well as engineering studies from 2004 to 2015, when Cassini was in orbit around the planet Saturn. In this article, we will focus primarily on the Kepler spacecraft Ka-band link, which has been used for operational telemetry downlink from an Earth trailing orbit where the spacecraft resides. We analyzed the received Ka-band signal level data in order to characterize link performance over a wide range of weather conditions and as a function of elevation angle. Based on this analysis of Kepler and Cassini flight data, we found that a 4-dB margin with respect to adverse conditions ensures that we achieve at least a 95 percent data return.

Pollen-climate relationships in time (9 ka, 6 ka, 0 ka) and space (upland vs. lowland) in eastern continental Asia

NASA Astrophysics Data System (ADS)

Tian, Fang; Cao, Xianyong; Dallmeyer, Anne; Zhao, Yan; Ni, Jian; Herzschuh, Ulrike

2017-01-01

Temporal and spatial stability of the vegetation-climate relationship is a basic ecological assumption for pollen-based quantitative inferences of past climate change and for predicting future vegetation. We explore this assumption for the Holocene in eastern continental Asia (China, Mongolia). Boosted regression trees (BRT) between fossil pollen taxa percentages (Abies, Artemisia, Betula, Chenopodiaceae, Cyperaceae, Ephedra, Picea, Pinus, Poaceae and Quercus) and climate model outputs of mean annual precipitation (Pann) and mean temperature of the warmest month (Mtwa) for 9 and 6 ka (ka = thousand years before present) were set up and results compared to those obtained from relating modern pollen to modern climate. Overall, our results reveal only slight temporal differences in the pollen-climate relationships. Our analyses suggest that the importance of Pann compared with Mtwa for taxa distribution is higher today than it was at 6 ka and 9 ka. In particular, the relevance of Pann for Picea and Pinus increases and has become the main determinant. This change in the climate-tree pollen relationship parallels a widespread tree pollen decrease in north-central China and the eastern Tibetan Plateau. We assume that this is at least partly related to vegetation-climate disequilibrium originating from human impact. Increased atmospheric CO2 concentration may have permitted the expansion of moisture-loving herb taxa (Cyperaceae and Poaceae) during the late Holocene into arid/semi-arid areas. We furthermore find that the pollen-climate relationship between north-central China and the eastern Tibetan Plateau is generally similar, but that regional differences are larger than temporal differences. In summary, vegetation-climate relationships in China are generally stable in space and time, and pollen-based climate reconstructions can be applied to the Holocene. Regional differences imply the calibration-set should be restricted spatially.

The timing, two-pulsed nature, and variable climatic expression of the 4.2 ka event: A review and new high-resolution stalagmite data from Namibia

NASA Astrophysics Data System (ADS)

Railsback, L. Bruce; Liang, Fuyuan; Brook, G. A.; Voarintsoa, Ny Riavo G.; Sletten, Hillary R.; Marais, Eugene; Hardt, Ben; Cheng, Hai; Edwards, R. Lawrence

2018-04-01

The climatic event between 4.2 and 3.9 ka BP known as the "4.2 ka event" is commonly considered to be a synchronous global drought that happened as one pulse. However, careful comparison of records from around the world shows that synchrony is possible only if the published chronologies of the various records are shifted to the extent allowed by the uncertainties of their age data, that several records suggest a two-pulsed event, and that some records suggest a wet rather than dry event. The radiometric ages constraining those records have uncertainties of several decades if not hundreds of years, and in some records the event is represented by only one or two analyses. This paper reports a new record from Stalagmite DP1 from northeastern Namibia in which high 230Th/232Th activity ratios allow small age uncertainties ranging between only 10-28 years, and the event is documented by more than 35 isotopic analyses and by petrographic observation of a surface of dissolution. The ages from Stalagmite DP1 combine with results from 11 other records from around the world to suggest an event centered at about 4.07 ka BP with bracketing ages of 4.15 to 3.93 ka BP. The isotopic and petrographic results suggest a two-pulsed wet event in northeastern Namibia, which is in the Southern Hemisphere's summer rainfall zone where more rain presumably fell with southward migration of the Inter-Tropical Convergence Zone as the result of cooling in the Northern Hemisphere. Comparison with other records from outside the region of dryness from the Mediterranean to eastern Asia suggests that multiple climatic zones similarly moved southward during the event, in some cases bringing wetter conditions that contradict the notion of global drought.

Gear Fault Diagnosis Based on BP Neural Network

NASA Astrophysics Data System (ADS)

Huang, Yongsheng; Huang, Ruoshi

2018-03-01

Gear transmission is more complex, widely used in machinery fields, which form of fault has some nonlinear characteristics. This paper uses BP neural network to train the gear of four typical failure modes, and achieves satisfactory results. Tested by using test data, test results have an agreement with the actual results. The results show that the BP neural network can effectively solve the complex state of gear fault in the gear fault diagnosis.

Accurate pKa calculation of the conjugate acids of alkanolamines, alkaloids and nucleotide bases by quantum chemical methods.

PubMed

Gangarapu, Satesh; Marcelis, Antonius T M; Zuilhof, Han

2013-04-02

The pKa of the conjugate acids of alkanolamines, neurotransmitters, alkaloid drugs and nucleotide bases are calculated with density functional methods (B3LYP, M08-HX and M11-L) and ab initio methods (SCS-MP2, G3). Implicit solvent effects are included with a conductor-like polarizable continuum model (CPCM) and universal solvation models (SMD, SM8). G3, SCS-MP2 and M11-L methods coupled with SMD and SM8 solvation models perform well for alkanolamines with mean unsigned errors below 0.20 pKa units, in all cases. Extending this method to the pKa calculation of 35 nitrogen-containing compounds spanning 12 pKa units showed an excellent correlation between experimental and computational pKa values of these 35 amines with the computationally low-cost SM8/M11-L density functional approach. Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

The Mars Observer Ka-band link experiment

NASA Technical Reports Server (NTRS)

Rebold, T. A.; Kwok, A.; Wood, G. E.; Butman, S.

1994-01-01

The Ka-Band Link Experiment was the first demonstration of a deep-space communications link in the 32- to 35-GHz band (Ka-band). It was carried out using the Mars Observer spacecraft while the spacecraft was in the cruise phase of its mission and using a 34-meter beam-waveguide research and development antenna at the Goldstone complex of the DSN. The DSN has been investigating the performance benefits of a shift from X-band (8.4 GHz) to Ka-band (32 GHz) for deep-space communications. The fourfold increase in frequency is expected to offer a factor of 3 to 10 improvement (5 to 10 dB) in signal strength for a given spacecraft transmitter power and antenna size. Until recently, the expected benefits were based on performance studies, with an eye to implementing such a link, but theory was transformed to reality when a 33.7-GHz Ka-band signal was received from the spacecraft by DSS 13. This article describes the design and implementation of the Ka-Band Link Experiment from the spacecraft to the DSS-13 system, as well as results from the Ka-band telemetry demonstration, ranging demonstration, and long-term tracking experiment. Finally, a preliminary analysis of comparative X- and Ka-band tracking results is included. These results show a 4- to 7-dB advantage for Ka-band using the system at DSS 13, assuming such obstacles as antenna pointing loss and power conversion loss are overcome.

Vegetation and Climate Change during the Last Deglaciation in the Great Khingan Mountain, Northeastern China

PubMed Central

Wu, Jing; Liu, Qiang; Wang, Luo; Chu, Guo-qiang; Liu, Jia-qi

2016-01-01

The Great Khingan Mountain range, Northeast China, is located on the northern limit of modern East Asian Summer Monsoon (EASM) and thus highly sensitive to the extension of the EASM from glacial to interglacial modes. Here, we present a high-resolution pollen record covering the last glacial maximum and the early Holocene from a closed crater Lake Moon to reconstruct vegetation history during the glacial-interglacial transition and thus register the evolution of the EASM during the last deglaciation. The vegetation history has gone through distinct changes from subalpine meadow in the last glacial maximum to dry steppe dominated by Artemisia from 20.3 to 17.4 ka BP, subalpine meadow dominated by Cyperaceae and Artemisia between 17.4 and 14.4 ka BP, and forest steppe dominated by Betula and Artemisia after 14.4 ka BP. The pollen-based temperature index demonstrates a gradual warming trend started at around 20.3 ka BP with interruptions of several brief events. Two cold conditions occurred around at 17.2–16.6 ka BP and 12.8–11.8 ka BP, temporally correlating to the Henrich 1 and the Younger Dryas events respectively, 1and abrupt warming events occurred around at 14.4 ka BP and 11.8 ka BP, probably relevant to the beginning of the Bølling-Allerød stages and the Holocene. The pollen-based moisture proxy shows distinct drought condition during the last glacial maximum (20.3–18.0 ka BP) and the Younger Dryas. The climate history based on pollen record of Lake Moon suggests that the regional temperature variability was coherent with the classical climate in the North Atlantic, implying the dominance of the high latitude processes on the EASM evolution from the Last Glacial Maximum (LGM) to early Holocene. The local humidity variability was influenced by the EASM limitedly before the Bølling-Allerød warming, which is mainly controlled by the summer rainfall due to the EASM front covering the Northeast China after that. PMID:26730966

Vegetation and Climate Change during the Last Deglaciation in the Great Khingan Mountain, Northeastern China.

PubMed

Wu, Jing; Liu, Qiang; Wang, Luo; Chu, Guo-qiang; Liu, Jia-qi

2016-01-01

The Great Khingan Mountain range, Northeast China, is located on the northern limit of modern East Asian Summer Monsoon (EASM) and thus highly sensitive to the extension of the EASM from glacial to interglacial modes. Here, we present a high-resolution pollen record covering the last glacial maximum and the early Holocene from a closed crater Lake Moon to reconstruct vegetation history during the glacial-interglacial transition and thus register the evolution of the EASM during the last deglaciation. The vegetation history has gone through distinct changes from subalpine meadow in the last glacial maximum to dry steppe dominated by Artemisia from 20.3 to 17.4 ka BP, subalpine meadow dominated by Cyperaceae and Artemisia between 17.4 and 14.4 ka BP, and forest steppe dominated by Betula and Artemisia after 14.4 ka BP. The pollen-based temperature index demonstrates a gradual warming trend started at around 20.3 ka BP with interruptions of several brief events. Two cold conditions occurred around at 17.2-16.6 ka BP and 12.8-11.8 ka BP, temporally correlating to the Henrich 1 and the Younger Dryas events respectively, 1and abrupt warming events occurred around at 14.4 ka BP and 11.8 ka BP, probably relevant to the beginning of the Bølling-Allerød stages and the Holocene. The pollen-based moisture proxy shows distinct drought condition during the last glacial maximum (20.3-18.0 ka BP) and the Younger Dryas. The climate history based on pollen record of Lake Moon suggests that the regional temperature variability was coherent with the classical climate in the North Atlantic, implying the dominance of the high latitude processes on the EASM evolution from the Last Glacial Maximum (LGM) to early Holocene. The local humidity variability was influenced by the EASM limitedly before the Bølling-Allerød warming, which is mainly controlled by the summer rainfall due to the EASM front covering the Northeast China after that.

Late quaternary lake level changes of Taro Co and neighbouring lakes, southwestern Tibetan Plateau, based on OSL dating and ostracod analysis

NASA Astrophysics Data System (ADS)

Alivernini, Mauro; Lai, Zhongping; Frenzel, Peter; Fürstenberg, Sascha; Wang, Junbo; Guo, Yun; Peng, Ping; Haberzettl, Torsten; Börner, Nicole; Mischke, Steffen

2018-07-01

The Late Quaternary lake history of Taro Co and three neighbouring lakes was investigated to reconstruct local hydrological conditions and the regional moisture availability. Ostracod-based water depth and habitat reconstructions combined with OSL and radiocarbon dating are performed to better understand the Taro Co lake system evolution during the Late Quaternary. A high-stand is observed at 36.1 ka before present which represents the highest lake level since then related to a wet stage and resulting in a merging of Taro Co and its neighbouring lakes Zabuye and Lagkor Co this time. The lake level then decreased and reached its minimum around 30 ka. After c. 20 ka, the lake rose above the present day level. A minor low-stand, with colder and drier conditions, is documented at 12.5 cal. ka BP. Taro Co Zabuye and Lagkor Co formed one large lake with a corresponding high-stand during the early Holocene (11.2-9.7 cal. ka BP). After this Holocene lake level maximum, all three lakes shrank, probably related to drier conditions, and Lagkor Co became separated from the Taro Co-Zabuye system at c.7 ka. Subsequently, the lake levels decreased further about 30 m and Taro Co began to separate from Zabuye Lake at around 3.5 ka. The accelerating lake-level decrease of Taro Co was interrupted by a short-term lake level rise after 2 ka BP, probably related to minor variations of the monsoonal components. A last minor high-stand occurred at about 0.8 ka before today and subsequently the lake level of Taro Co registers a slight increase in recent years.

Alkenone-based reconstructions show four-phase Holocene temperature history for Arctic Svalbard

NASA Astrophysics Data System (ADS)

van der Bilt, W. G. M.; D'Andrea, W. J.; Bakke, J.; Balascio, N.; Werner, J.; Bradley, R. S.

2016-12-01

Situated at the crossroads of global oceanic and atmospheric circulation patterns, the Arctic is a key component of Earth`s climate system. Amplified by sea-ice feedbacks, even modest shifts in regional heat budget drive large climate responses. This is highlighted by the dramatic response of the Arctic to global warming. Assessing the signature of underlying forcings require paleoclimate records, allowing us to expand our knowledge beyond the short instrumental period and contextualize ongoing warming. However, such data are scarce and sparse in the Arctic, limiting our ability to address these issues. We present two quantitative Holocene-length summer temperature reconstructions from the Arctic Svalbard archipelago. Temperature estimates are based on alkenone unsaturation ratios measured on sediment cores from two lakes. Our data reveal a dynamic Holocene temperature history, with reconstructed lake water temperatures spanning a range of 6-8 °C, and characterized by four phases. The Early Holocene was marked by an early ( 10.5 ka cal. BP) onset of insolation-driven Hypsithermal conditions, likely compounded by strengthening oceanic heat transport. This warm interval was interrupted by cooling between 10.5-8.3 ka cal. BP that we attribute to cooling effects from the melting Northern Hemisphere ice sheets. Temperatures declined throughout the Middle Holocene, following a gradual trend that was accentuated by two cooling steps between 7.8-7 ka cal. BP and 4.4-3.5 ka cal. BP. These transitions coincide with a strengthening influence of Arctic water and sea-ice in the adjacent eastern Fram Strait. During the Late Holocene (past 4 ka), temperature change decoupled from the still-declining insolation, and fluctuated around cold mean conditions. This study improves our understanding of Arctic climate dynamics by demonstrating that Holocene Svalbard temperatures were governed by an alternation of forcing mechanism.

Hunter-Gatherer Responses to the 8.2 Ka Cold Event in the Fennoscandian Arctic

NASA Astrophysics Data System (ADS)

Manninen, M. A.

2014-12-01

Because of a marked influence of warm Atlantic water to primary productivity in the Barents Sea, the marine ecosystem in northernmost Fennoscandia is sensitive to disturbances in the North Atlantic oceanographic system. The 8.2 ka climate event, according to current knowledge, was triggered by a disturbance in the North Atlantic Thermohaline circulation. This suggests concurrent and strong climatic and marine cooling in the area covering the northernmost parts of Finland, Norway, and Sweden during the climate event. In this area ecosystem response to the 8.2 ka event can therefore be expected to have been prominent, which in turn should be reflected in the contemporary human socio-economic systems. A study that employs lithic technological, statistical, and spatial analyses of Late Mesolithic (ca. 8450-6850 cal BP) lithic technology and settlement configuration in the area indicates that lithic technology and settlement patterns were reorganised following the climatic and marine cooling. The studied groups changed their lithic technology as a result of developments that led to increased use of terrestrial resources and an accompanying long-distance coast/inland residential mobility pattern. Besides lithic technological changes and long-distance mobility on land, decreased marine productivity probably also explains the disappearance of semi-subterranean houses from the coast at ca. 8200 cal BP, while their reappearance after ca. 7500 cal BP can be linked to a increased influx of warm salty water into the Barents Sea. The results suggest that in the past a long period of decreased influx of Atlantic water into the Barents Sea has had disastrous consequences for the marine ecosystem. At present the Barents Sea fisheries have notable economic importance and produce, for example, over 90% of the Norwegian Atlantic cod (Gadus morhua) catch.

Isotope-coded, iodoacetamide-based reagent to determine individual cysteine pKa values by MALDI-TOF mass spectrometry

PubMed Central

Nelson, Kimberly J.; Day, Amanda E.; Zeng, Bubing B.; King, S. Bruce; Poole, Leslie B.

2008-01-01

Cysteine reactivity in enzymes is imparted to a large extent by the stabilization of the deprotonated form of the reduced cysteine (i.e. the thiolate) within the active site. While this is likely to be an important chemical attribute of many thiol-based enzymes including cysteine-dependent peroxidases (peroxiredoxins) and proteases, only relatively few pKa values have been determined experimentally. Presented here is a new technique for determining the pKa value of cysteine residues through quantitative mass spectrometry following chemical modification with an iodoacetamide-based reagent over a range of pH buffers. This isotope-coded reagent, N-phenyl iodoacetamide (iodoacetanilide), is readily prepared in deuterated (d5) and protiated (d0) versions and is more reactive toward free cysteine than is iodoacetamide. Using this approach, the pKa values for the two cysteine residues in Escherichia coli thioredoxin were determined to be 6.5 and > 10, in good agreement with previous reports using chemical modification approaches. This technique allows the pKa of specific cysteine residues to be determined in a clear, fast, and simple manner and, because cysteine residues on separate tryptic peptides are measured separately, is not complicated by the presence of multiple cysteines within the protein of interest. PMID:18162165

High-Resolution Speleothem Records of the Indian Ocean Monsoon Variability of the Last 6 ka and 0,5 ka From Soqotra Island, Yemen

NASA Astrophysics Data System (ADS)

de Geest, P.; Verheyden, S.; Cheng, H.; Edwards, L. R.; Keppens, E.

2004-12-01

Soqotra is an arid tropical island in the Indian Ocean, situated between the Horn of Africa and the Arabian Peninsula. The inter-tropical convergence zone (ITCZ) passes there twice each year, resulting in a bi-annual rainy season. High-resolution \\delta18O and \\delta13C ratios of speleothems from two different caves are used to reconstruct changes in the Monsoon intensity and/or variability. Based on 10 TIMS 234U/230Th dating, two active speleothems from Hoq (S-STM1) and Kazekas Caves (S-STM5) have formed over a period of 6 ka BP and 0,5 ka BP, respectively. To obtain a detailed climate reconstruction more than 1000 \\delta13C and \\delta18O measurements were carried out, providing a time resolution between 2,5 and 10 years. In S-STM1 \\delta18O -values range between -4,5\\permil and -1,5\\permil and \\delta13C -values between -10,5\\permil and -5,5\\permil; while for S-STM5 these values range respectively between -4\\permil and -2\\permil and -7\\permil and -3\\permil (vs VPDB). Based on the comparison between \\delta18O excursions and historical meteorological data, the amount of precipitation is reflected in the \\delta18O signal. Different mechanisms for the \\delta13C are considered, such as a diminution of the C4-type vegetation during droughts, resulting in more positive \\delta13C -value or kinetic effects during the calcification process itself. Throughout the time series, co-variation occur between \\delta13C and \\delta18O -values (R2= 0,69) exhibiting long term (millennial) and short term (decadal) variations. In both stalagmites, layers of white porous calcite (WPC) (0,1-0,5mm) and dark dense calcite (DDC) (0,01-0,1mm) alternate, most probably due to seasonal variations. The WPC has more positive \\delta13C and \\delta18O -values, while the DDC shows more negative values, clearly demonstrated by high-resolution micro sampling up to a monthly to bi-weekly resolution. A positive correlation between the greyscale variations in the calcite fabric, the

A 75 ka Stalagmite Paleoclimate Record from Northern Venezuela

NASA Astrophysics Data System (ADS)

Retrum, J. B.; Gonzalez, L. A.; Edwards, R.; Tincher, S. M.; Cheng, H.; Urbani, F.

2011-12-01

A stalagmite collected from Cueva Zarraga in the northern Venezuelan Andes was analyzed to determine local paleoclimatic history and help examine climate change in the Caribbean. Ages were determined by U/Th disequilibrium and the stalagmite shows a nearly complete record for ~ 75 ka. Two significant periods of non-deposition have been identified. The first period ranges between the Last Glacial Maximum at 19,820 ± 149 cal yr BP and a brief resumption of stalagmite growth at 15,409 ± 747 cal yr BP, likely representing the Bølling-Allerød interstadial. After the brief period of deposition, growth does not resume unil the Holocene at 10,408 ± 78 cal yr BP. Carbon and oxygen isotopes show a major depletion shift from the last glacial period to the Holocene, suggesting warmer and wetter conditions during the Holocene. The oxygen isotope depletion shift is also seen in the Cariaco Basin foraminifera record off the northern coast of Venezuela. While tempting to attribute δ13C depletion to decrease of the C4 plant contribution, there is no evidence that the area experience major vegetation changes. We attribute the δ13C depletion to enhanced recycling of soil CO2 resulting from canopy effects. Today, Cueva Zarraga is at the northern extent of the Inter-Tropical Convergence Zone (ITCZ). The cooler and drier conditions of the last glacial period suggest a southern displacement of the ITCZ. The close proximity of Cueva Zarraga to Cariaco Basin may allow for a high resolution tropical terrestrial and oceanic climatic response comparison.

Electric Power Engineering Cost Predicting Model Based on the PCA-GA-BP

NASA Astrophysics Data System (ADS)

Wen, Lei; Yu, Jiake; Zhao, Xin

2017-10-01

In this paper a hybrid prediction algorithm: PCA-GA-BP model is proposed. PCA algorithm is established to reduce the correlation between indicators of original data and decrease difficulty of BP neural network in complex dimensional calculation. The BP neural network is established to estimate the cost of power transmission project. The results show that PCA-GA-BP algorithm can improve result of prediction of electric power engineering cost.

Lake level and climate records of the last 90 ka from the Northern Basin of Lake Van, eastern Turkey

NASA Astrophysics Data System (ADS)

Çağatay, M. N.; Öğretmen, N.; Damcı, E.; Stockhecke, M.; Sancar, Ü.; Eriş, K. K.; Özeren, S.

2014-11-01

Sedimentary, geochemical and mineralogical analyses of the ICDP cores recovered from the Northern Basin (NB) of Lake Van provide evidence of lake level and climatic changes related to orbital and North Atlantic climate system over the last 90 ka. High lake levels are generally observed during the interglacial and interstadial periods, which are marked by deposition of varved sediments with high total organic carbon (TOC), total inorganic carbon (TIC), low detrital influx (high Ca/F) and high δ18O and δ13C values of authigenic carbonate. During the glacial and stadial periods of 71-58 ka BP (Marine Isotope Stage 4, MIS4) and end of last glaciation-deglaciation (30-14.5 ka BP; MIS3) relatively low lake levels prevailed, and grey homogeneous to faintly laminated clayey silts were deposited at high sedimentation and low organic productivity rates. Millennial-scale variability of the proxies during 60-30 ka BP (MIS3 is correlated with the Dansgaard-Oeschger (D-O)) and Holocene abrupt climate events in the Atlantic. These events are characterized by laminated sediments, with high TOC, TIC, Ca/Fe, δ18O and δ13C values. The Lake Van NB records correlate well in the region with the climate records from the lakes Zeribar and Urmia in Iran and the Sofular Cave in NW Anatolia, but are in general in anti-phase to those from the Dead Sea Basin (Lake Lisan) in the Levant. The relatively higher δ18O values (0 to -0.4‰) for the interglacial and interstadial periods in the Lake Van NB section are due to the higher temperature and seasonality of precipitation and higher evaporation, whereas the lower values (-0.8 to -2‰) during the glacial and stadial periods are caused mainly by relative decrease in both temperature and seasonality of precipitation. The high δ18O values (up to 4.2‰) during the Younger Dryas, together with the presence of dolomite and low TOC contents, supports evaporative conditions and low lake level. A gradual decrease in the δ18O values from an

Arginine: Its pKa value revisited

PubMed Central

Fitch, Carolyn A; Platzer, Gerald; Okon, Mark; Garcia-Moreno E, Bertrand; McIntosh, Lawrence P

2015-01-01

Using complementary approaches of potentiometry and NMR spectroscopy, we have determined that the equilibrium acid dissociation constant (pKa value) of the arginine guanidinium group is 13.8 ± 0.1. This is substantially higher than that of ∼12 often used in structure-based electrostatics calculations and cited in biochemistry textbooks. The revised intrinsic pKa value helps explains why arginine side chains in proteins are always predominantly charged, even at pH values as great as 10. The high pKa value also reinforces the observation that arginine side chains are invariably protonated under physiological conditions of near neutral pH. This occurs even when the guanidinium moiety is buried in a hydrophobic micro-environment, such as that inside a protein or a lipid membrane, thought to be incompatible with the presence of a charged group. PMID:25808204

Lake System Development on the northern Tibetan Plateau during the last 12 ka

NASA Astrophysics Data System (ADS)

Ramisch, A. C.; Lockot, G.; Kasper, T.; Schulte, P.; Zhang, Y.; Daut, G.; Haberzettl, T.; Stauch, G.; Hartmann, K.; Zhu, L.; Lehmkuhl, F.; Maeusbacher, R.; Wuennemann, B.; Diekmann, B.

2013-12-01

Donggi Cona (northern Tibetan Plateau) and Lake Nam Co (southern Tibetan Plateau). Major differences occur during two broad Holocene episodes: Until ~6 ka cal BP the differences reach their maximum with a peak around 9.5 cal ka BP. An intensification of the Indian Summer Monsoon (ISM) led to wetter conditions and an increased minerogenic input into Lake Nam Co. Subsequently, the aridification on the TP led to decreased minerogenic input in all three lakes especially since ~2 ka cal BP. Short term divergences from this trend are caused by dry spells on the northern TP. Their timing is quasi synchronous to Holocene Bond events, suggesting a teleconnection of northern TP climate to the circulation of the North Atlantic Ocean.

Latest Quaternary palaeoceanographic change in the eastern North Atlantic based upon a dinoflagellate cyst event ecostratigraphy.

PubMed

Harland, Rex; Polovodova Asteman, Irina; Morley, Audrey; Morris, Angela; Harris, Anthony; Howe, John A

2016-05-01

The analyses of dinoflagellate cyst records, from the latest Quaternary sediments recovered from DSDP Core 610A taken on the Feni Ridge in the southern Rockall Trough, and part of core MD01-2461 on the continental margin of the Porcupine Seabight in the eastern North Atlantic Ocean, has provided evidence for significant oceanographic change encompassing the Last Glacial Maximum (LGM) and part of the Holocene. This together with other published records has led to a regional evaluation of oceanographic change in the eastern North Atlantic over the past 68 ka, based upon a distinctive dinoflagellate event ecostratigraphy. These changes reflect changes in the surface waters of the North Atlantic Current (NAC), and perhaps the deeper thermohaline Atlantic Meridional Overturning Circulation (AMOC), driving fundamental regime changes within the phytoplanktonic communities. Three distinctive dinoflagellate cyst associations based upon both factor and cluster analyses have been recognised. Associations characterised by Bitectatodinium tepikiense (between 61.1 ± 6.2 to 13.4 ± 1.1 ka BP), Nematosphaeropsis labyrinthus (between 10.5 ± 0.3 and 11.45 ± 0.8 ka. BP), and the cyst of Protoceratium reticulatum (between 8.5 ± 0.9 and 5.2 ± 1.3 ka. BP) indicate major change within the eastern North Atlantic oceanography. The transitions between these changes occur over a relatively short time span (c.1.5 ka), given our sampling resolution, and have the potential to be incorporated into an event stratigraphy through the latest Quaternary as recommended by the INTIMATE (INTegrating Ice core, MArine and TErrestrial records) group. The inclusion of a dinoflagellate cyst event stratigraphy would highlight changes within the phytoplankton of the North Atlantic Ocean as a fully glacial world changed to our present interglacial.

Holocene temperature and hydrological changes reconstructed by bacterial 3-hydroxy fatty acids in a stalagmite from central China

NASA Astrophysics Data System (ADS)

Wang, Canfa; Bendle, James A.; Zhang, Hongbin; Yang, Yi; Liu, Deng; Huang, Junhua; Cui, Jingwei; Xie, Shucheng

2018-07-01

To achieve a sufficient understanding of the spatial dynamics of terrestrial climate variability, new proxies and networks of data that cover thousands of years and run up to the present day are needed. Here we show the first Gram-negative bacterial 3-hydroxy fatty acid (3-OH-FA) based temperature and hydrological records from any paleoclimate archive globally. The data, covering the last 9 ka before present (BP), are generated from an individual stalagmite, collected from Heshang Cave, located on a tributary of the Yangtze River, central China (30°27‧N, 110°25‧E; 294 m). Our results indicate a clear early-to-middle Holocene Climatic Optimum (8.0-6.0 ka BP) followed by a long-term monotonic cooling and increasing variability over the last 0.9 ka BP. The hydrological record shows two relatively long wet periods (8.8-5.9 ka BP and 3.0-0 ka BP) and one relatively dry period (5.9-3.0 ka BP) in central China. We show that 3-OH-FA biomarkers hold promise as independent tools for paleoclimate reconstruction, with the potential to deconvolve temperature and hydrological signals from an individual stalagmite.

A regional record of expanded Holocene wetlands and prehistoric human occupation from paleowetland deposits of the western Yarlung Tsangpo valley, southern Tibetan Plateau

NASA Astrophysics Data System (ADS)

Hudson, Adam M.; Olsen, John W.; Quade, Jay; Lei, Guoliang; Huth, Tyler E.; Zhang, Hucai

2016-07-01

The Asian Monsoon, which brings ∼80% of annual precipitation to much of the Tibetan Plateau, provides runoff to major rivers across the Asian continent. Paleoclimate records indicate summer insolation and North Atlantic paleotemperature changes forced variations in monsoon rainfall through the Holocene, resulting in hydrologic and ecologic changes in plateau watersheds. We present a record of Holocene hydrologic variability in the Yarlung Tsangpo (YT) valley of the southern Tibetan Plateau, based on sedimentology and 14C dating of organic-rich 'black mats' in paleowetlands deposits, that shows changes in wetlands extent in response to changing monsoon intensity. Four sedimentary units indicate decreasing monsoon intensity since 10.4 ka BP. Wet conditions occurred at ∼10.4 ka BP, ∼9.6 ka BP and ∼7.9-4.8 ka BP, with similar-to-modern conditions from ∼4.6-2.0 ka BP, and drier-than-modern conditions from ∼2.0 ka BP to present. Wetland changes correlate with monsoon intensity changes identified in nearby records, with weak monsoon intervals corresponding to desiccation and erosion of wetlands. Dating of in situ ceramic and microlithic artifacts within the wetlands indicates Epipaleolithic human occupation of the YT valley after 6.6 ka BP, supporting evidence for widespread colonization of the Tibetan Plateau in the early and mid-Holocene during warm, wet post-glacial conditions.

Alkenone-based reconstructions reveal four-phase Holocene temperature evolution for High Arctic Svalbard

NASA Astrophysics Data System (ADS)

van der Bilt, Willem G. M.; D'Andrea, William J.; Bakke, Jostein; Balascio, Nicholas L.; Werner, Johannes P.; Gjerde, Marthe; Bradley, Raymond S.

2018-03-01

Situated at the crossroads of major oceanic and atmospheric circulation patterns, the Arctic is a key component of Earth's climate system. Compounded by sea-ice feedbacks, even modest shifts in the region's heat budget drive large climate responses. This is highlighted by the observed amplified response of the Arctic to global warming. Assessing the imprint and signature of underlying forcing mechanisms require paleoclimate records, allowing us to expand our knowledge beyond the short instrumental period and contextualize ongoing warming. However, such datasets are scarce and sparse in the Arctic, limiting our ability to address these issues. Here, we present two quantitative Holocene-length paleotemperature records from the High Arctic Svalbard archipelago, situated in the climatically sensitive Arctic North Atlantic. Temperature estimates are based on U37K unsaturation ratios from sediment cores of two lakes. Our data reveal a dynamic Holocene temperature evolution, with reconstructed summer lake water temperatures spanning a range of ∼6-8 °C, and characterized by four phases. The Early Holocene was marked by an early onset (∼10.5 ka cal. BP) of insolation-driven Hypsithermal conditions, likely compounded by strengthening oceanic heat transport. This warm interval was interrupted by cooling between ∼10.5-8.3 ka cal. BP that we attribute to cooling effects from the melting Northern Hemisphere ice sheets. Temperatures declined throughout the Middle Holocene, following a gradual trend that was accentuated by two cooling steps between ∼7.8-7 ka cal. BP and around ∼4.4-4.3 ka cal. BP. These transitions coincide with a strengthening influence of Arctic water and sea-ice in the adjacent Fram Strait. During the Late Holocene (past 4 ka), temperature change decoupled from the still-declining insolation, and fluctuated around comparatively cold mean conditions. By showing that Holocene Svalbard temperatures were governed by an alternation of forcings, this study

Density Functional Theory Calculation of pKa's of Thiols in Aqueous Solution Using Explicit Water Molecules and the Polarizable Continuum Model.

PubMed

Thapa, Bishnu; Schlegel, H Bernhard

2016-07-21

The pKa's of substituted thiols are important for understanding their properties and reactivities in applications in chemistry, biochemistry, and material chemistry. For a collection of 175 different density functionals and the SMD implicit solvation model, the average errors in the calculated pKa's of methanethiol and ethanethiol are almost 10 pKa units higher than for imidazole. A test set of 45 substituted thiols with pKa's ranging from 4 to 12 has been used to assess the performance of 8 functionals with 3 different basis sets. As expected, the basis set needs to include polarization functions on the hydrogens and diffuse functions on the heavy atoms. Solvent cavity scaling was ineffective in correcting the errors in the calculated pKa's. Inclusion of an explicit water molecule that is hydrogen bonded with the H of the thiol group (in neutral) or S(-) (in thiolates) lowers error by an average of 3.5 pKa units. With one explicit water and the SMD solvation model, pKa's calculated with the M06-2X, PBEPBE, BP86, and LC-BLYP functionals are found to deviate from the experimental values by about 1.5-2.0 pKa units whereas pKa's with the B3LYP, ωB97XD and PBEVWN5 functionals are still in error by more than 3 pKa units. The inclusion of three explicit water molecules lowers the calculated pKa further by about 4.5 pKa units. With the B3LYP and ωB97XD functionals, the calculated pKa's are within one unit of the experimental values whereas most other functionals used in this study underestimate the pKa's. This study shows that the ωB97XD functional with the 6-31+G(d,p) and 6-311++G(d,p) basis sets, and the SMD solvation model with three explicit water molecules hydrogen bonded to the sulfur produces the best result for the test set (average error -0.11 ± 0.50 and +0.15 ± 0.58, respectively). The B3LYP functional also performs well (average error -1.11 ± 0.82 and -0.78 ± 0.79, respectively).

Effective Multifocus Image Fusion Based on HVS and BP Neural Network

PubMed Central

Yang, Yong

2014-01-01

The aim of multifocus image fusion is to fuse the images taken from the same scene with different focuses to obtain a resultant image with all objects in focus. In this paper, a novel multifocus image fusion method based on human visual system (HVS) and back propagation (BP) neural network is presented. Three features which reflect the clarity of a pixel are firstly extracted and used to train a BP neural network to determine which pixel is clearer. The clearer pixels are then used to construct the initial fused image. Thirdly, the focused regions are detected by measuring the similarity between the source images and the initial fused image followed by morphological opening and closing operations. Finally, the final fused image is obtained by a fusion rule for those focused regions. Experimental results show that the proposed method can provide better performance and outperform several existing popular fusion methods in terms of both objective and subjective evaluations. PMID:24683327

Pollen-based evidence of extreme drought during the last Glacial (32.6-9.0 ka) in coastal southern California

NASA Astrophysics Data System (ADS)

Heusser, Linda E.; Kirby, Matthew E.; Nichols, Jonathan E.

2015-10-01

High resolution pollen analyses of sediment core LEDC10-1 from Lake Elsinore yield the first well-dated, terrestrial record of sub-centennial-scale ecologic change in coastal southern California between ˜32 and 9 ka. In the Lake Elsinore watershed, the initial, mesic montane conifer forests dominated by Pinus, and Cupressaceae with trace amounts of Abies and Picea were replaced by a sequence of multiple, extended severe mega-droughts between ˜27.5 and ˜25.5 ka, in which halophytic and xerophytic herbs and shrubs occupied an ephemeral lake. This prolonged and extended dry interval, which corresponds with warm waters offshore, imply strengthening of the North Pacific High and persistent below-average winter precipitation. The subsequent, contrasting monotonic occurrence of montane conifers reflects little variation in cold, mesic climate until ˜15 ka. Postglacial development of Quercus woodland and chaparral mark the return to more xeric, warmer conditions at this time. A brief reversal at ˜13.1-˜12.1 ka, as reflected by an expansion of Pinus, is correlative with the Younger Dryas and interrupts development of warm, postglacial climate. Subsequent gradual expansion of xeric vegetation post - Younger Dryas denotes the establishment of a winter hydroclimate regime in coastal southern California that is more similar to modern conditions. Pollen-based reconstructions of temperature and precipitation at Lake Elsinore are generally correlative with pollen-based paleoclimatic reconstructions and foraminifera-based sea surface temperatures from Santa Barbara Basin in marine core ODP 893. The conspicuous absence of the ˜27.5-˜25.5 ka glacial "mega-drought" in the Santa Barbara Basin pollen record highlights the sensitivity of Lake Elsinore to hydroclimate change, and thus, the importance of this new record that indicates that mega-drought can occur during the full glacial when climatic boundary conditions and forcings differed substantially from the present.

Vegetation history and climate variability since 1.3kaBP reconstructed from high-resolution multiproxy analysis of mountainous peat sediment, Southeast China

NASA Astrophysics Data System (ADS)

Ma, Chunmei; Cui, Anning; Fang, Yiman; Zhao, Lin; Jia, Yulian

2017-04-01

Climate change during the last two millennia is one of the most important focuses of the "Past Global Changes" (PAGES) initiative. In this study, vegetation history and climate variability since 1.3kaBP was reconstructed from high-resolution multiproxy analysis of mountainous peat sediment from the central part of a swamp in Jiangxi Province, China. 210Pb, 137Cs and AMS14C dating were used to build the age framework on the basis of Bacon model. Pollen, Humification degree (HD), Loss-on ignition (LOI), XRF scan elements and grain-size distribution were analyzed. During 637-800 AD, the vegetation combination consists of upland herbs taxa and scattered evergreen Quercus (Quercus E). However, the pollen concentration was very low, and plant genera were seldom. Since harsh environment is not conducive to pollen storage, vegetation condition reconstructed by pollen information cannot reflect real climate change. During the Medieval Warm Period (MWP, 800-1250 AD) vegetation is abundant through the entire period, Quercus E is the building group of the forest, Pinus and Castanopsis are sporadic. Upland herbs grew up vigorously in the lower part of forest. Peat began to accumulate in the basin high terrain, where wetland herbs grew vigorous. The climate during MWP was characterized by warm and wet, inside there were obvious secondary fluctuations. Dramatic vegetation changes were recorded during the Little Ice Age LIA,1340-1870 AD). The vegetation community was primarily dominated by Castanopsis, upland land herbs thrive; wetland herbs were sparse with great fluctuations depending on changes in the humidity. Overall, during LIA, temperature pattern was featured by "four cold period and three warm period", and humidity condition was experienced a process from drought to wet. Periodic analysis of the moisture proxy (PCA 1) and temperature indicator (E/D: evergreen/deciduous tree pollen) shows cyclic fluctuations of 150 years in the temperature and precipitation, which is

Sporo-pollen assemblage and paleoclimate events in shelf area of the southern Yellow Sea since 15 ka B. P.

NASA Astrophysics Data System (ADS)

Meng, Guanglan; Han, Yousong; Wang, Shaoqing; Wang, Zhenyan

2004-03-01

Based on the authors’ 1986 to 1994 sporo-pollen assemblage analysis in the southern Yellow Sea area, data from 3 main cores were studied in combination with14C, palaeomagnetic and thermoluminescence data. The evolution of the paleoclimate environments in the southern Yellow Sea since 15ka B. P. was revealed that, in deglaciation of the last glacial period, the climate of late glaciation transformed into that of postglaciation, accompanied by a series of violent climate fluctuations. These evolution events happened in a global climate background and related to the geographic changes in eastern China. We distinguished three short-term cooling events and two warming events. Among them, the sporo-pollen assemblage of subzone A1 showed some cold climate features indicating that a cooling event occurred at about 15-14ka. B. P. in early deglaciation. This subzone corresponds to the Oldest Dryas. In subzone A3, many drought-enduring herbal pollens and some few pollens of cold-resistant Picea, Abies, etc. were found, which indicated that a cooling event, with cold and arid climate, occurred at about 12-11ka. B. P. in late deglaciation. This subzone corresponds to the Younger Dryas. The sporo-pollen assemblage of zone B showed warm and arid climate features in postglaciation. Although the assemblage of subzone B2 indicated a cold and arid climate environment, the development of flora in subzone B2 climate was less cold than that in A3. Subzone B2 indicated a cooling event which occurred at about 9ka B. P. in early olocene. Subzone A2, with some distinct differences from subzone A1 and A3, indicated a warming event which occurred at 14-13ka. B.P. and should correspond to a warming fluctuation. The sporo-pollen assemblage of zone C showed features of warn-moist flora and climate, and indicated a warming event which universally occurred along the coast of eastern China at 8-3 ka B. P. in middle Holocene, and its duration was longer than that of any climate events mentioned

A Ka-Band Celestial Reference Frame with Applications to Deep Space Navigation

NASA Technical Reports Server (NTRS)

Jacobs, Christopher S.; Clark, J. Eric; Garcia-Miro, Cristina; Horiuchi, Shinji; Sotuela, Ioana

2011-01-01

The Ka-band radio spectrum is now being used for a wide variety of applications. This paper highlights the use of Ka-band as a frequency for precise deep space navigation based on a set of reference beacons provided by extragalactic quasars which emit broadband noise at Ka-band. This quasar-based celestial reference frame is constructed using X/Ka-band (8.4/32 GHz) from fifty-five 24-hour sessions with the Deep Space Network antennas in California, Australia, and Spain. We report on observations which have detected 464 sources covering the full 24 hours of Right Ascension and declinations down to -45 deg. Comparison of this X/Ka-band frame to the international standard S/X-band (2.3/8.4 GHz) ICRF2 shows wRMS agreement of approximately 200 micro-arcsec in alpha cos(delta) and approximately 300 micro-arcsec in delta. There is evidence for systematic errors at the 100 micro-arcsec level. Known errors include limited SNR, lack of instrumental phase calibration, tropospheric refraction mis-modeling, and limited southern geometry. The motivation for extending the celestial reference frame to frequencies above 8 GHz is to access more compact source morphology for improved frame stability and to support spacecraft navigation for Ka-band based NASA missions.

Cloud-based BP system integrated with CPOE improves self-management of the hypertensive patients: A randomized controlled trial.

PubMed

Lee, Peisan; Liu, Ju-Chi; Hsieh, Ming-Hsiung; Hao, Wen-Rui; Tseng, Yuan-Teng; Liu, Shuen-Hsin; Lin, Yung-Kuo; Sung, Li-Chin; Huang, Jen-Hung; Yang, Hung-Yu; Ye, Jong-Shiuan; Zheng, He-Shun; Hsu, Min-Huei; Syed-Abdul, Shabbir; Lu, Richard; Nguyen, Phung-Anh; Iqbal, Usman; Huang, Chih-Wei; Jian, Wen-Shan; Li, Yu-Chuan Jack

2016-08-01

Less than 50% of patients with hypertensive disease manage to maintain their blood pressure (BP) within normal levels. The aim of this study is to evaluate whether cloud BP system integrated with computerized physician order entry (CPOE) can improve BP management as compared with traditional care. A randomized controlled trial done on a random sample of 382 adults recruited from 786 patients who had been diagnosed with hypertension and receiving treatment for hypertension in two district hospitals in the north of Taiwan. Physicians had access to cloud BP data from CPOE. Neither patients nor physicians were blinded to group assignment. The study was conducted over a period of seven months. At baseline, the enrollees were 50% male with a mean (SD) age of 58.18 (10.83) years. The mean sitting BP of both arms was no different. The proportion of patients with BP control at two, four and six months was significantly greater in the intervention group than in the control group. The average capture rates of blood pressure in the intervention group were also significantly higher than the control group in all three check-points. Cloud-based BP system integrated with CPOE at the point of care achieved better BP control compared to traditional care. This system does not require any technical skills and is therefore suitable for every age group. The praise and assurance to the patients from the physicians after reviewing the Cloud BP records positively reinforced both BP measuring and medication adherence behaviors. Copyright © 2016. Published by Elsevier Ireland Ltd.

Based on BP Neural Network Stock Prediction

ERIC Educational Resources Information Center

Liu, Xiangwei; Ma, Xin

2012-01-01

The stock market has a high profit and high risk features, on the stock market analysis and prediction research has been paid attention to by people. Stock price trend is a complex nonlinear function, so the price has certain predictability. This article mainly with improved BP neural network (BPNN) to set up the stock market prediction model, and…

Ka-band study: 1988

NASA Technical Reports Server (NTRS)

Layland, J. W.; Horttor, R. L.; Clauss, R. C.; Wilcher, J. H.; Wallace, R. J.; Mudgway, D. J.

1989-01-01

The Ka-band study team was chartered in late 1987 to bring together all the planning elements for establishing 32 GHz (Ka-band) as the primary downlink frequency for deep-space operation, and to provide a stable baseline from which to pursue that development. This article summarizes the results of that study at its conclusion in mid-1988, and corresponds to material presented to NASA's Office of Space Operations on July 14, 1988. For a variety of reasons, Ka-band is the right next major step in deep-space communications. It offers improved radio metric accuracy through reduced plasma sensitivity and increased bandwidth. Because of these improvements, it offers the opportunity to reduce costs in the flight radio system or in the DSN by allocating part of the overall benefits of Ka-band to this cost reduction. A mission scenario is being planned that can drive at least two and possibly all three of the DSN subnets to provide a Ka-band downlink capability by the turn of the century. The implementation scenario devised by the study team is believed to be feasible within reasonable resource expectations, and capable of providing the needed upgrade as a natural follow-on to the technology development which is already underway.

The Ka'bah: House of God

ERIC Educational Resources Information Center

Social Education, 1978

1978-01-01

Describes the major Moslem edifice (the Ka'bah) in the holy city of Mecca and explains the importance of the Ka'bah in Muslim religious belief. Cultural and religious practices related to the Ka'bah are described. (Author/DB)

pKa shifting in double-stranded RNA is highly dependent upon nearest neighbors and bulge positioning.

PubMed

Wilcox, Jennifer L; Bevilacqua, Philip C

2013-10-22

Shifting of pKa's in RNA is important for many biological processes; however, the driving forces responsible for shifting are not well understood. Herein, we determine how structural environments surrounding protonated bases affect pKa shifting in double-stranded RNA (dsRNA). Using (31)P NMR, we determined the pKa of the adenine in an A(+)·C base pair in various sequence and structural environments. We found a significant dependence of pKa on the base pairing strength of nearest neighbors and the location of a nearby bulge. Increasing nearest neighbor base pairing strength shifted the pKa of the adenine in an A(+)·C base pair higher by an additional 1.6 pKa units, from 6.5 to 8.1, which is well above neutrality. The addition of a bulge two base pairs away from a protonated A(+)·C base pair shifted the pKa by only ~0.5 units less than a perfectly base paired hairpin; however, positioning the bulge just one base pair away from the A(+)·C base pair prohibited formation of the protonated base pair as well as several flanking base pairs. Comparison of data collected at 25 °C and 100 mM KCl to biological temperature and Mg(2+) concentration revealed only slight pKa changes, suggesting that similar sequence contexts in biological systems have the potential to be protonated at biological pH. We present a general model to aid in the determination of the roles protonated bases may play in various dsRNA-mediated processes including ADAR editing, miRNA processing, programmed ribosomal frameshifting, and general acid-base catalysis in ribozymes.

TopBP1 functions with 53BP1 in the G1 DNA damage checkpoint

PubMed Central

Cescutti, Rachele; Negrini, Simona; Kohzaki, Masaoki; Halazonetis, Thanos D

2010-01-01

TopBP1 is a checkpoint protein that colocalizes with ATR at sites of DNA replication stress. In this study, we show that TopBP1 also colocalizes with 53BP1 at sites of DNA double-strand breaks (DSBs), but only in the G1-phase of the cell cycle. Recruitment of TopBP1 to sites of DNA replication stress was dependent on BRCT domains 1–2 and 7–8, whereas recruitment to sites of DNA DSBs was dependent on BRCT domains 1–2 and 4–5. The BRCT domains 4–5 interacted with 53BP1 and recruitment of TopBP1 to sites of DNA DSBs in G1 was dependent on 53BP1. As TopBP1 contains a domain important for ATR activation, we examined whether it contributes to the G1 cell cycle checkpoint. By monitoring the entry of irradiated G1 cells into S-phase, we observed a checkpoint defect after siRNA-mediated depletion of TopBP1, 53BP1 or ATM. Thus, TopBP1 may mediate the checkpoint function of 53BP1 in G1. PMID:20871591

TopBP1 functions with 53BP1 in the G1 DNA damage checkpoint.

PubMed

Cescutti, Rachele; Negrini, Simona; Kohzaki, Masaoki; Halazonetis, Thanos D

2010-11-03

TopBP1 is a checkpoint protein that colocalizes with ATR at sites of DNA replication stress. In this study, we show that TopBP1 also colocalizes with 53BP1 at sites of DNA double-strand breaks (DSBs), but only in the G1-phase of the cell cycle. Recruitment of TopBP1 to sites of DNA replication stress was dependent on BRCT domains 1-2 and 7-8, whereas recruitment to sites of DNA DSBs was dependent on BRCT domains 1-2 and 4-5. The BRCT domains 4-5 interacted with 53BP1 and recruitment of TopBP1 to sites of DNA DSBs in G1 was dependent on 53BP1. As TopBP1 contains a domain important for ATR activation, we examined whether it contributes to the G1 cell cycle checkpoint. By monitoring the entry of irradiated G1 cells into S-phase, we observed a checkpoint defect after siRNA-mediated depletion of TopBP1, 53BP1 or ATM. Thus, TopBP1 may mediate the checkpoint function of 53BP1 in G1.

Research on FBG-Based CFRP Structural Damage Identification Using BP Neural Network

NASA Astrophysics Data System (ADS)

Geng, Xiangyi; Lu, Shizeng; Jiang, Mingshun; Sui, Qingmei; Lv, Shanshan; Xiao, Hang; Jia, Yuxi; Jia, Lei

2018-06-01

A damage identification system of carbon fiber reinforced plastics (CFRP) structures is investigated using fiber Bragg grating (FBG) sensors and back propagation (BP) neural network. FBG sensors are applied to construct the sensing network to detect the structural dynamic response signals generated by active actuation. The damage identification model is built based on the BP neural network. The dynamic signal characteristics extracted by the Fourier transform are the inputs, and the damage states are the outputs of the model. Besides, damages are simulated by placing lumped masses with different weights instead of inducing real damages, which is confirmed to be feasible by finite element analysis (FEA). At last, the damage identification system is verified on a CFRP plate with 300 mm × 300 mm experimental area, with the accurate identification of varied damage states. The system provides a practical way for CFRP structural damage identification.

Sedimentological analysis and long term chronostratigraphy (> 30 ka) of turbidite record offshore the central Algerian margin

NASA Astrophysics Data System (ADS)

Bachir, Roza Si; Babonneau, Nathalie; Cattaneo, Antonio; Ratzov, Gueorgui; Déverchère, Jacques; Yelles, Karim

2016-04-01

The Algerian margin is a Cenozoic passive margin located at the diffuse plate boundary between Eurasia and Africa, presently reactivated in compression. It is among the most seismically active areas of the Western Mediterranean and it suffered from numerous devastating earthquakes, for example the El Asnam earthquake in 1980 (Ms = 7.3) and the Boumerdès earthquake in 2003 (Ms = 6.7). A consistent dataset of sediment cores was collected between 2003 and 2007 during the MARADJA and PRISME cruises. Previous work has focused on the Holocene and allowed to highlight a consistent paleosesimological record in the central area of the Algerian margin (Algiers area). The purpose of this work is to extend the sedimentary analysis of turbiditic deposits over longer periods of time (throughout the Last Glacial Maximum), in order to determine whether the record of seismic events is exploitable, or if the impact of climate-driven and eustatic variations is dominant in turbidite triggering and accumulation. A sedimentological and stratigraphic approach was performed on the three most distal sediment cores of the area: PSM-KS21, PSM-KS23 and PSM-KS27. The establishment of an age model is based on radiocarbon dating and measurements of oxygen stable isotopes on planktonic foraminifera collected from the pelagic intervals (hemipelagites) interfingered with the turbidites. A homogeneous clay bed identifiable by its grey colour is a marker to correlate the three cores and it is dated between 18 and 19 ka BP. The PSM-KS23 core has the longest sedimentary record, thus it was used as a reference. Preliminary results show a significant increase in the number and thickness of individual turbidites between 10 and 20 ka BP. The expected results of this work are: 1) to determine whether the number of turbidites is consistent and correlates among the three cores; 2) to assess if the paleo-earthquake signal related to turbidites can be extracted beyond the Holocene; 3) to identify the

BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines.

PubMed

Hernández, Yözen; Bernstein, Rocky; Pagan, Pedro; Vargas, Levy; McCaig, William; Ramrattan, Girish; Akther, Saymon; Larracuente, Amanda; Di, Lia; Vieira, Filipe G; Qiu, Wei-Gang

2018-03-02

Automated bioinformatics workflows are more robust, easier to maintain, and results more reproducible when built with command-line utilities than with custom-coded scripts. Command-line utilities further benefit by relieving bioinformatics developers to learn the use of, or to interact directly with, biological software libraries. There is however a lack of command-line utilities that leverage popular Open Source biological software toolkits such as BioPerl ( http://bioperl.org ) to make many of the well-designed, robust, and routinely used biological classes available for a wider base of end users. Designed as standard utilities for UNIX-family operating systems, BpWrapper makes functionality of some of the most popular BioPerl modules readily accessible on the command line to novice as well as to experienced bioinformatics practitioners. The initial release of BpWrapper includes four utilities with concise command-line user interfaces, bioseq, bioaln, biotree, and biopop, specialized for manipulation of molecular sequences, sequence alignments, phylogenetic trees, and DNA polymorphisms, respectively. Over a hundred methods are currently available as command-line options and new methods are easily incorporated. Performance of BpWrapper utilities lags that of precompiled utilities while equivalent to that of other utilities based on BioPerl. BpWrapper has been tested on BioPerl Release 1.6, Perl versions 5.10.1 to 5.25.10, and operating systems including Apple macOS, Microsoft Windows, and GNU/Linux. Release code is available from the Comprehensive Perl Archive Network (CPAN) at https://metacpan.org/pod/Bio::BPWrapper . Source code is available on GitHub at https://github.com/bioperl/p5-bpwrapper . BpWrapper improves on existing sequence utilities by following the design principles of Unix text utilities such including a concise user interface, extensive command-line options, and standard input/output for serialized operations. Further, dozens of novel methods for

A link prediction method for heterogeneous networks based on BP neural network

NASA Astrophysics Data System (ADS)

Li, Ji-chao; Zhao, Dan-ling; Ge, Bing-Feng; Yang, Ke-Wei; Chen, Ying-Wu

2018-04-01

Most real-world systems, composed of different types of objects connected via many interconnections, can be abstracted as various complex heterogeneous networks. Link prediction for heterogeneous networks is of great significance for mining missing links and reconfiguring networks according to observed information, with considerable applications in, for example, friend and location recommendations and disease-gene candidate detection. In this paper, we put forward a novel integrated framework, called MPBP (Meta-Path feature-based BP neural network model), to predict multiple types of links for heterogeneous networks. More specifically, the concept of meta-path is introduced, followed by the extraction of meta-path features for heterogeneous networks. Next, based on the extracted meta-path features, a supervised link prediction model is built with a three-layer BP neural network. Then, the solution algorithm of the proposed link prediction model is put forward to obtain predicted results by iteratively training the network. Last, numerical experiments on the dataset of examples of a gene-disease network and a combat network are conducted to verify the effectiveness and feasibility of the proposed MPBP. It shows that the MPBP with very good performance is superior to the baseline methods.

Woody vegetation, fuel and fire track the melting of the Scandinavian ice-sheet before 9500 cal yr BP

NASA Astrophysics Data System (ADS)

Carcaillet, Christopher; Hörnberg, Greger; Zackrisson, Olle

2012-11-01

New studies indicate the presence of early Holocene ice-free areas far north in Scandinavia. Post-glacial fire and vegetation were investigated based on sedimentary charcoal and pollen from two small lakes in northern Sweden. Accumulation of organic sediment started around 10,900 and 9200 cal yr BP, showing that both lake valleys were ice-free extremely early given their northerly location. Fire events started after 9600 cal yr BP and became less common around the '8.2-ka event'. Woody vegetation provided fuel that contributed to fires. The first vegetation in our pollen record consisted of Hippophae, Dryas, grasses and sedges. Subsequently broadleaved trees (Betula, Salix) increased in abundance and later Pinus, Alnus, ferns and Lycopodium characterized the vegetation. Pollen from Larix, Picea and Malus were also found. The change in vegetation composition was synchronous with the decrease in lake-water pH in the region, indicating ecosystem-scale processes; this occurred during a period of net global and regional warming. The changes in fire frequency and vegetation appear independent of regional trends in precipitation. The reconstructed fire history and vegetation support the scenario of early ice-free areas far north in Scandinavia during early Holocene warming, creating favorable conditions for woody plants and wildfires.

Wetlands sediment record from the upper Yarlung Tsangpo valley, southwest Tibetan Plateau, reveals mid-Holocene Epipaleolithic human occupation coincident with increased early and mid-Holocene wetness driven by enhanced Indian Monsoon rainfall

NASA Astrophysics Data System (ADS)

Hudson, A. M.; Olsen, J. W.; Quade, J.; Lei, G.; Huth, T.; Zhang, H.; Perreault, C.

2016-12-01

The headwaters of the Yarlung Tsangpo river valley, located in the southwestern Tibetan Plateau, are characterized by a cold and dry climate, but contain abundant river-marginal wetlands environments, which fluctuate in extent in response to changes in local water table elevation. This region receives 80% of precipitation from the Indian Monsoon, which forms the dominant control on moisture availability, and hence wetlands extent. Our paleowetlands record, based on 14C dating of organic-rich paleowetlands deposits, provides a novel record of Holocene monsoon intensity. The wetlands deposits consist of four sedimentary units that indicate decreasing wetlands extent and monsoon intensity since 10.4 ka BP. Wet conditions occurred at ˜10.4 ka BP, ˜9.6 ka BP and ˜7.9-4.8 ka BP, with similar-to-modern conditions from ˜4.6-2.0 ka BP, and drier-than-modern conditions from ˜2.0 ka BP to present. Wetland changes correlate with monsoon intensity changes identified in nearby records, with weak monsoon intervals corresponding to desiccation and erosion of wetlands deposits. Dating of in situ ceramic and microlithic artifacts in wetlands sediments at multiple sites indicates Epipaleolithic human occupation of the YT valley after 6.6 ka BP. Artifact typology study reveals a similar microlithic technology was employed across the high plateau interior, but XRF obsidian provenance reveals separate northeast and southwest lithic conveyance zones. This indicates widespread colonization of the high, arid Tibetan Plateau interior by one or more highly mobile human populations during the early and mid-Holocene, coincident with favorable warm, wet climate conditions.

Joint influence of the Indo-Pacific Warm Pool and Northern Arabian Sea Temperatures on the Indian Summer Monsoon in a Global Climate Model Simulation

NASA Astrophysics Data System (ADS)

Befort, Daniel J.; Leckebusch, Gregor C.; Cubasch, Ulrich

2016-04-01

Proxy-based studies confirmed that the Indian Summer Monsoon (ISM) shows large variations during the Holocene. These changes might be explained by changes in orbital conditions and solar insolation but are also thought to be associated to changes in oceanic conditions, e.g. over the Indo-Pacific-Warm-Pool region. However, due to the nature of these (proxy-based) analyses no conclusion about atmospheric circulation changes during dry and wet epochs are possible. Here, a fully-coupled global climate simulation (AOGCM) covering the past 6000 years is analysed regarding ISM variability. Several dry and wet epochs are found, the most striking around 2ka BP (dry) and 1.7ka BP (wet). As only orbital parameters change during integration, we expect these "shorter-term" changes to be associated with changes in oceanic conditions. During 1.7ka BP the sea surface temperatures (SST) over the Northern Arabian Sea (NARAB) are significantly warmer compared to 2ka BP, whereas cooler conditions are found over the western Pacific Ocean. Additionally, significant differences are found over large parts of the North Atlantic. To explain in how far these different ocean basins are responsible for anomalous conditions during 1.7ka BP, several sensitivity experiments with changed SST/SIC conditions are carried out. It is found that neither the SST's in the Pacific nor in the Indian Ocean are able to reproduce the anomalous rainfall and atmospheric circulation patterns during 1.7ka on its own. Instead, anomalous dry conditions during 2ka BP and wet conditions during 1.7ka BP are associated with a shift of the Indo-Pacific-Warm-Pool (IPWP) and simultaneous anomalous sea-surface temperatures over the NARAB region. Eventually, it is tested in how far this hypothesis holds true for other dry and wet events in the AOGCM data during the whole 6000 years. In general, a shift of the IPWP without anomalous SST conditions over the NARAB region (and vice versa) is not sufficient to cause long

The historical Coffin-Lowry syndrome family revisited: identification of two novel mutations of RPS6KA3 in three male patients.

PubMed

Nishimoto, Hiromi Koso; Ha, Kyungsoo; Jones, Julie R; Dwivedi, Alka; Cho, Hyun-Min; Layman, Lawrence C; Kim, Hyung-Goo

2014-09-01

Coffin-Lowry syndrome (CLS) is a rare X-linked dominant disorder characterized by intellectual disability, craniofacial abnormalities, short stature, tapering fingers, hypotonia, and skeletal malformations. CLS is caused by mutations in the Ribosomal Protein S6 Kinase, 90 kDa, Polypeptide 3 (RPS6KA3) gene located at Xp22.12, which encodes Ribosomal S6 Kinase 2 (RSK2). Here we analyzed RPS6KA3 in three unrelated CLS patients including one from the historical Coffin-Lowry syndrome family and found two novel mutations. To date, over 140 mutations in RPS6KA3 have been reported. However, the etiology of the very first familial case, which was described in 1971 by Lowry with detailed phenotype and coined the term CLS, has remained unknown. More than 40 years after the report, we succeeded in identifying deposited fibroblast cells from one patient of this historic family and found a novel heterozygous 216 bp in-frame deletion, encompassing exons 15 and 16 of RPS6KA3. Drop episodes in CLS patients were reported to be associated with truncating mutations deleting the C-terminal kinase domain (KD), and only one missense mutation and one single basepair duplication involving the C-terminal KD of RSK2 in the patients with drop episode have been reported thus far. Here we report the first in-frame deletion in C-terminal KD of RPS6KA3 in a CLS patient with drop episodes. © 2014 Wiley Periodicals, Inc.

At the end of the 14C time scale--the Middle to Upper Paleolithic record of western Eurasia.

PubMed

Jöris, Olaf; Street, Martin

2008-11-01

The dynamics of change underlying the demographic processes that led to the replacement of Neandertals by Anatomically Modern Humans (AMH) and the emergence of what are recognized as Upper Paleolithic technologies and behavior can only be understood with reference to the underlying chronological framework. This paper examines the European chronometric (mainly radiocarbon-based) record for the period between ca. 40 and 30 ka 14C BP and proposes a relatively rapid transition within some 2,500 years. This can be summarized in the following falsifiable hypotheses: (1) final Middle Paleolithic (FMP) "transitional" industries (Uluzzian, Chatelperronian, leaf-point industries) were made by Neandertals and date predominantly to between ca. 41 and 38 ka 14C BP, but not younger than 35/34 ka 14C BP; (2) initial (IUP) and early (EUP) Upper Paleolithic "transitional" industries (Bachokirian, Bohunician, Protoaurignacian, Kostenki 14) will date to between ca. 39/38 and 35 ka 14C BP and document the appearance of AMH in Europe; (3) the earliest Aurignacian (I) appears throughout Europe quasi simultaneously at ca. 35 ka 14C BP. The earliest appearance of figurative art is documented only for a later phase ca. 33.0/32.5-29.2 ka 14C BP. Taken together, the Middle to Upper Paleolithic transition appears to be a cumulative process involving the acquisition of different elements of "behavioral modernity" through several "stages of innovation."

Lead-Lag relationships? Asynchrounous and Abrupt Shifts in Atmospheric Circulation, Temperature, and Vegetation during the 8.2 ka Event in the Eastern Mediterranean at Tenaghi Philippon, Greece

NASA Astrophysics Data System (ADS)

Niedermeyer, E. M.; Mulch, A.; Pross, J.

2017-12-01

The "8.2 ka event" has been an abrupt and prominent climate perturbation during the Holocene, and is characterized by an episode of generally colder and dryer conditions in the Northern Hemisphere realm. However, evidence to what extent this event has had an impact on climate in the Mediterranean region is ambiguous, in particular with respect to rainfall, temperature and vegetation change on land. Here we present a new, high-resolution record (ø 15 years during the event) of paleotemperatures from the Tenaghi Philippon peat deposit, Eastern Macedonia, Greece, using the MBT'/CBT index based on brGDGTs (branched Glycerol-Dialkyl-Glycerol-Tetraethers). Our data show fairly stable temperatures before the event, which is initiated at 8.1 ka by an abrupt and continuous cooling during the first 35 years of the event. After a short, 10-year episode of minimum temperatures, the event is ended by a similarly abrupt and continuous warming within 38 years. Comparison of our record with a previous study of the stable hydrogen isotopic composition of higher-plant waxes (δDwax) on the same core1 shows that changes in temperature occurred simultaneously with shifts in atmospherics moisture sources (Mediterranean vs Atlantic). Interestingly, further comparison of our data with a previous palynological study of the same core2 reveals that changes in vegetation associated with the 8.2 ka event precede shifts in hydrology and temperature by 100 years. This suggests either pronounced changes in seasonality of temperature and rainfall after the onset of the 8.2 ka event, i.e. at the peak of the event, or that changes in local atmospheric circulation (moisture sources) and temperature where not the initial trigger of changes in vegetation. References: Pross, J., Kotthoff, U., Müller, U.C., Peyron, O., Dormoy, I., Schmiedl, G., Kalaitzidis, S. and Smith, A.M. (2009): Massive perturbation in terrestrial ecosystems of the Eastern Mediterranean region associated with the 8.2 kyr B.P

History of Larix decidua Mill. (European larch) since 130 ka

NASA Astrophysics Data System (ADS)

Wagner, Stefanie; Litt, Thomas; Sánchez-Goñi, Maria-Fernanda; Petit, Rémy J.

2015-09-01

Retrospective studies focussing on forest dynamics using fossil and genetic data can provide important keys to prepare forests for the future. In this study we analyse the impact of past climate and anthropogenic changes on Larix decidua Mill. (European larch) populations based on a new range-wide fossil compilation encompassing the last 130 ka and on recently produced genetic data (nuclear, mitochondrial). Results demonstrate that during the last 130 ka L. decidua persisted close to its current distribution range and colonized vast areas outside this range during the first two early Weichselian interstadials (c. 87-109 ka and c. 83-78 ka), reaching a distributional maxima in the north-central European lowlands. Some fossil sites point to notably rapid responses to some abrupt climate events (Dansgaard-Oeschger cycles and Heinrich Events). Combined fossil and genetic data identify at least six MIS 2 refuges and postglacial recolonization pathways. The establishment of extant L. decidua forests dates back to the first two millennia of the Holocene (c. 11.5-9.5 ka) and the onset of anthropogenic impact was inferred since the late Neolithic (c. 6 ka), with major changes occurring since the Bronze Age (c. 4 ka). During the last 300 years human-induced translocations resulted in recent admixture of populations originating from separate refuges. Altogether, the results of this study provide valuable clues for developing sustainable conservation and management strategies targeting ancient genetic lineages and for studying evolutionary issues.

HiRadProp: High-Frequency Modeling and Prediction of Tropospheric Radiopropagation Parameters from Ground-Based-Multi-Channel Radiometric Measurements between Ka and W Band

DTIC Science & Technology

2016-05-11

new physically -based prediction models for all-weather path attenuation estimation at Ka, V and W band from multi- channel microwave radiometric data...of new physically -based prediction models for all-weather path attenuation estimation at Ka, V and W band from multi- channel microwave radiometric...the medium behavior at these frequency bands from both a physical and a statistical point of view (e.g., [5]-[7]). However, these campaigns are

Predicting p Ka values from EEM atomic charges

PubMed Central

2013-01-01

The acid dissociation constant p Ka is a very important molecular property, and there is a strong interest in the development of reliable and fast methods for p Ka prediction. We have evaluated the p Ka prediction capabilities of QSPR models based on empirical atomic charges calculated by the Electronegativity Equalization Method (EEM). Specifically, we collected 18 EEM parameter sets created for 8 different quantum mechanical (QM) charge calculation schemes. Afterwards, we prepared a training set of 74 substituted phenols. Additionally, for each molecule we generated its dissociated form by removing the phenolic hydrogen. For all the molecules in the training set, we then calculated EEM charges using the 18 parameter sets, and the QM charges using the 8 above mentioned charge calculation schemes. For each type of QM and EEM charges, we created one QSPR model employing charges from the non-dissociated molecules (three descriptor QSPR models), and one QSPR model based on charges from both dissociated and non-dissociated molecules (QSPR models with five descriptors). Afterwards, we calculated the quality criteria and evaluated all the QSPR models obtained. We found that QSPR models employing the EEM charges proved as a good approach for the prediction of p Ka (63% of these models had R2 > 0.9, while the best had R2 = 0.924). As expected, QM QSPR models provided more accurate p Ka predictions than the EEM QSPR models but the differences were not significant. Furthermore, a big advantage of the EEM QSPR models is that their descriptors (i.e., EEM atomic charges) can be calculated markedly faster than the QM charge descriptors. Moreover, we found that the EEM QSPR models are not so strongly influenced by the selection of the charge calculation approach as the QM QSPR models. The robustness of the EEM QSPR models was subsequently confirmed by cross-validation. The applicability of EEM QSPR models for other chemical classes was illustrated by a case study focused on

Accelerator 14C dates for early upper paleolithic (basal Aurignacian) at El Castillo Cave (Spain)

USGS Publications Warehouse

Valdes, V.C.; Bischoff, J.L.

1989-01-01

Three fragments of charcoal taken from different parts of the lowermost bed containing Aurignacian artifacts at El Castillo Cave yielded AMS dates of 37??7 (?? 1??8) ka bp, 38??5 (?? 1??8) ka bp, and 40??0 (?? 2??1) ka bp (average 38??7 ?? 1??9 ka bp). These dates are almost identical to new AMS dates from l'Arbreda cave in Catalunya on the same cultural horizon (average 38??5 ?? 1??0 ka bp) and are significantly older than the earliest dates for Aurignacian industries in the Aquitaine and in other parts of Central and Western Europe. ?? 1989.

Onboard Interferometric SAR Processor for the Ka-Band Radar Interferometer (KaRIn)

NASA Technical Reports Server (NTRS)

Esteban-Fernandez, Daniel; Rodriquez, Ernesto; Peral, Eva; Clark, Duane I.; Wu, Xiaoqing

2011-01-01

An interferometric synthetic aperture radar (SAR) onboard processor concept and algorithm has been developed for the Ka-band radar interferometer (KaRIn) instrument on the Surface and Ocean Topography (SWOT) mission. This is a mission- critical subsystem that will perform interferometric SAR processing and multi-look averaging over the oceans to decrease the data rate by three orders of magnitude, and therefore enable the downlink of the radar data to the ground. The onboard processor performs demodulation, range compression, coregistration, and re-sampling, and forms nine azimuth squinted beams. For each of them, an interferogram is generated, including common-band spectral filtering to improve correlation, followed by averaging to the final 1 1-km ground resolution pixel. The onboard processor has been prototyped on a custom FPGA-based cPCI board, which will be part of the radar s digital subsystem. The level of complexity of this technology, dictated by the implementation of interferometric SAR processing at high resolution, the extremely tight level of accuracy required, and its implementation on FPGAs are unprecedented at the time of this reporting for an onboard processor for flight applications.

Modification of wave-cut and faulting-controlled landforms.

USGS Publications Warehouse

Hanks, T.C.; Bucknam, R.C.; Lajoie, K.R.; Wallace, R.E.

1984-01-01

From a casual observation that the form of degraded fault scarps resembles the error function, this investigation proceeds through an elementary diffusion equation representation of landform evolution to the application of the resulting equations to the modern topography of scarplike landforms. The value of K = 1 GKG (K = 'mass diffusivity'; 1 GKG = 1m2/ka) may be generally applicable as a good first approximation, to the modification of alluvial terranes within the semiarid regions of the western United States. The Lake Bonneville shoreline K is the basis for dating four sets of fault scarps in west-central Utah. The Drum Mountains fault scarps date at 3.6 to 5.7 ka BP. Fault scarps along the eastern base of the Fish Springs Range are very young, 3 ka BP. We estimate the age of fault scarps along the western flank of the Oquirrh Mountains to be 32 ka B.P. Fault scarps along the NE margin of the Sheeprock Mountains are even older, 53 ka BP. -from Authors

Computing pKa Values in Different Solvents by Electrostatic Transformation.

PubMed

Rossini, Emanuele; Netz, Roland R; Knapp, Ernst-Walter

2016-07-12

We introduce a method that requires only moderate computational effort to compute pKa values of small molecules in different solvents with an average accuracy of better than 0.7 pH units. With a known pKa value in one solvent, the electrostatic transform method computes the pKa value in any other solvent if the proton solvation energy is known in both considered solvents. To apply the electrostatic transform method to a molecule, the electrostatic solvation energies of the protonated and deprotonated molecular species are computed in the two considered solvents using a dielectric continuum to describe the solvent. This is demonstrated for 30 molecules belonging to 10 different molecular families by considering 77 measured pKa values in 4 different solvents: water, acetonitrile, dimethyl sulfoxide, and methanol. The electrostatic transform method can be applied to any other solvent if the proton solvation energy is known. It is exclusively based on physicochemical principles, not using any empirical fetch factors or explicit solvent molecules, to obtain agreement with measured pKa values and is therefore ready to be generalized to other solute molecules and solvents. From the computed pKa values, we obtained relative proton solvation energies, which agree very well with the proton solvation energies computed recently by ab initio methods, and used these energies in the present study.

Fade Mitigation Techniques at Ka-Band

NASA Technical Reports Server (NTRS)

Dissanayake, Asoka (Editor)

1996-01-01

Rain fading is the dominant propagation impairment affecting Ka-band satellite links and rain fade mitigation is a key element in the design of Ka-band satellite networks. Some of the common fade mitigation techniques include: power control, diversity, adaptive coding, and resource sharing. The Advanced Communications Technology Satellite (ACTS) provides an excellent opportunity to develop and test Ka-band rain impairment amelioration techniques. Up-link power control and diversity are discussed in this paper.

Cosmogenic exposure age constraints on deglaciation and flow behaviour of a marine-based ice stream in western Scotland, 21-16 ka

NASA Astrophysics Data System (ADS)

Small, David; Benetti, Sara; Dove, Dayton; Ballantyne, Colin K.; Fabel, Derek; Clark, Chris D.; Gheorghiu, Delia M.; Newall, Jennifer; Xu, Sheng

2017-07-01

Understanding how marine-based ice streams operated during episodes of deglaciation requires geochronological data that constrain both timing of deglaciation and changes in their flow behaviour, such as that from unconstrained ice streaming to topographically restricted flow. We present seventeen new 10Be exposure ages from glacial boulders and bedrock at sites in western Scotland within the area drained by the Hebrides Ice Stream, a marine-based ice stream that drained a large proportion of the former British-Irish Ice Sheet. Exposure ages from Tiree constrain deglaciation of a topographic high within the central zone of the ice stream, from which convergent flowsets were produced during ice streaming. These ages thus constrain thinning of the Hebrides Ice Stream, which, on the basis of supporting information, we infer to represent cessation of ice streaming at 20.6 ± 1.2 ka, 3-4 ka earlier than previously inferred. A period of more topographically restricted flow produced flow indicators superimposed on those relating to full ice stream conditions, and exposure ages from up-stream of these constrain deglaciation to 17.5 ± 1.0 ka. Complete deglaciation of the marine sector of the Hebrides Ice Stream occurred by 17-16 ka at which time the ice margin was located near the present coastline. Exposure ages from the southernmost Outer Hebrides (Mingulay and Barra) indicate deglaciation at 18.9 ± 1.0 and 17.1 ± 1.0 ka respectively, demonstrating that an independent ice cap persisted on the southern Outer Hebrides for 3-4 ka after initial ice stream deglaciation. This suggests that deglaciation of the Hebrides Ice Stream was focused along major submarine troughs. Collectively, our data constrain initial deglaciation and changes in flow regime of the Hebrides Ice Stream, final deglaciation of its marine sector, and deglaciation of the southern portion of the independent Outer Hebrides Ice Cap, providing chronological constraints on future numerical reconstructions of

Mid-Wisconsin to Holocene permafrost and landscape dynamics based on a drained lake basin core from the northern Seward Peninsula, northwest Alaska

USGS Publications Warehouse

Lenz, Josefine; Grosse, Guido; Jones, Benjamin M.; Anthony, Katey M. Walter; Bobrov, Anatoly; Wulf, Sabine; Wetterich, Sebastian

2016-01-01

Permafrost-related processes drive regional landscape dynamics in the Arctic terrestrial system. A better understanding of past periods indicative of permafrost degradation and aggradation is important for predicting the future response of Arctic landscapes to climate change. Here, we used a multi-proxy approach to analyse a ~ 4 m long sediment core from a drained thermokarst lake basin on the northern Seward Peninsula in western Arctic Alaska (USA). Sedimentological, biogeochemical, geochronological, micropalaeontological (ostracoda, testate amoebae) and tephra analyses were used to determine the long-term environmental Early-Wisconsin to Holocene history preserved in our core for central Beringia. Yedoma accumulation dominated throughout the Early to Late-Wisconsin but was interrupted by wetland formation from 44.5 to 41.5 ka BP. The latter was terminated by the deposition of 1 m of volcanic tephra, most likely originating from the South Killeak Maar eruption at about 42 ka BP. Yedoma deposition continued until 22.5 ka BP and was followed by a depositional hiatus in the sediment core between 22.5 and 0.23 ka BP. We interpret this hiatus as due to intense thermokarst activity in the areas surrounding the site, which served as a sediment source during the Late-Wisconsin to Holocene climate transition. The lake forming the modern basin on the upland initiated around 0.23 ka BP and drained catastrophically in spring 2005. The present study emphasises that Arctic lake systems and periglacial landscapes are highly dynamic and that permafrost formation as well as degradation in central Beringia was controlled by regional to global climate patterns as well as by local disturbances.

A multi-proxy palaeoecological and palaeoclimatic record within full glacial lacustrine deposits, western Tennessee, USA

USGS Publications Warehouse

Grimley, D.A.; Daniel, L.; Kaplan, S.W.; Yansa, C.H.; Curry, B. Brandon; Oches, E.A.

2009-01-01

The Fulton Section, along the Mississippi River in western Tennessee, USA, is a 1km continuous exposure (~20m vertically) of Quaternary fluvial and lacustrine deposits, inset within Eocene sediments and buried by thick loess. Fossiliferous slackwater lake sediments record maximum aggradation during the last two major glaciations, with deposition between ca. 190-140 ka and 24-1814C ka BP, based on amino acid and radiocarbon chronology, respectively. During the onset of full glacial conditions (ca. 24-22 14C ka BP), a relatively permanent shallow lake environment is indicated by ostracods, aquatic molluscs, and both pollen and macrofossils of aquatic plants. By 21.8 14C ka BP, increasing emergent plants, amphibious gastropods (Pomatiopsis) and heavier ??18O compositions suggest marsh-like conditions in a periodically drying lake. The surrounding uplands consisted of Picea-Pinus woodlands mixed with cool-temperate hardwoods (e.g. Quercus, Populus, Carya), grasses and herbs. More open conditions ensued ca. 20 14C ka BP, with loess and slopewash gradually infilling the former lake by 18 14C ka BP. Modern analogue analyses of ostracods and palaeontological evidence imply a full glacial climate similar to today's mixed-boreal zone in central Minnesota, USA, about 98C cooler in mean annual temperature than present-day western Tennessee. Copyright ?? 2009 John Wiley & Sons, Ltd.

Evidence for higher-than-average air temperatures after the 8.2 ka event provided by a Central European δ18O record

NASA Astrophysics Data System (ADS)

Andersen, Nils; Lauterbach, Stefan; Erlenkeuser, Helmut; Danielopol, Dan L.; Namiotko, Tadeusz; Hüls, Matthias; Belmecheri, Soumaya; Dulski, Peter; Nantke, Carla; Meyer, Hanno; Chapligin, Bernhard; von Grafenstein, Ulrich; Brauer, Achim

2017-09-01

The so-called 8.2 ka event represents one of the most prominent cold climate anomalies during the Holocene warm period. Accordingly, several studies have addressed its trigger mechanisms, absolute dating and regional characteristics so far. However, knowledge about subsequent climate recovery is still limited although this might be essential for the understanding of rapid climatic changes. Here we present a new sub-decadally resolved and precisely dated oxygen isotope (δ18O) record for the interval between 7.7 and 8.7 ka BP (103 calendar years before AD 1950), derived from the calcareous valves of benthic ostracods preserved in the varved lake sediments of pre-Alpine Mondsee (Austria). Besides a clear reflection of the 8.2 ka event, showing a good agreement in timing, duration and magnitude with other regional stable isotope records, the high-resolution Mondsee lake sediment record provides evidence for a 75-year-long interval of higher-than-average δ18O values directly after the 8.2 ka event, possibly reflecting increased air temperatures in Central Europe. This observation is consistent with evidence from other proxy records in the North Atlantic realm, thus most probably reflecting a hemispheric-scale climate signal rather than a local phenomenon. As a possible trigger we suggest an enhanced resumption of the Atlantic meridional overturning circulation (AMOC), supporting assumptions from climate model simulations.

Pollen-based continental climate reconstructions at 6 and 21 ka: a global synthesis

USGS Publications Warehouse

Bartlein, P.J.; Harrison, S.P.; Brewer, Sandra; Connor, S.; Davis, B.A.S.; Gajewski, K.; Guiot, J.; Harrison-Prentice, T. I.; Henderson, A.; Peyron, O.; Prentice, I.C.; Scholze, M.; Seppa, H.; Shuman, B.; Sugita, S.; Thompson, R.S.; Viau, A.E.; Williams, J.; Wu, H.

2010-01-01

Subfossil pollen and plant macrofossil data derived from 14C-dated sediment profiles can provide quantitative information on glacial and interglacial climates. The data allow climate variables related to growing-season warmth, winter cold, and plant-available moisture to be reconstructed. Continental-scale reconstructions have been made for the mid-Holocene (MH, around 6 ka) and Last Glacial Maximum (LGM, around 21 ka), allowing comparison with palaeoclimate simulations currently being carried out as part of the fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change. The synthesis of the available MH and LGM climate reconstructions and their uncertainties, obtained using modern-analogue, regression and model-inversion techniques, is presented for four temperature variables and two moisture variables. Reconstructions of the same variables based on surface-pollen assemblages are shown to be accurate and unbiased. Reconstructed LGM and MH climate anomaly patterns are coherent, consistent between variables, and robust with respect to the choice of technique. They support a conceptual model of the controls of Late Quaternary climate change whereby the first-order effects of orbital variations and greenhouse forcing on the seasonal cycle of temperature are predictably modified by responses of the atmospheric circulation and surface energy balance.

Pollen-based continental climate reconstructions at 6 and 21 ka: A global synthesis

USGS Publications Warehouse

Bartlein, P.J.; Harrison, S.P.; Brewer, Sandra; Connor, S.; Davis, B.A.S.; Gajewski, K.; Guiot, J.; Harrison-Prentice, T. I.; Henderson, A.; Peyron, O.; Prentice, I.C.; Scholze, M.; Seppa, H.; Shuman, B.; Sugita, S.; Thompson, R.S.; Viau, A.E.; Williams, J.; Wu, H.

2011-01-01

Subfossil pollen and plant macrofossil data derived from 14C-dated sediment profiles can provide quantitative information on glacial and interglacial climates. The data allow climate variables related to growing-season warmth, winter cold, and plant-available moisture to be reconstructed. Continental-scale reconstructions have been made for the mid-Holocene (MH, around 6 ka) and Last Glacial Maximum (LGM, around 21 ka), allowing comparison with palaeoclimate simulations currently being carried out as part of the fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change. The synthesis of the available MH and LGM climate reconstructions and their uncertainties, obtained using modern-analogue, regression and model-inversion techniques, is presented for four temperature variables and two moisture variables. Reconstructions of the same variables based on surface-pollen assemblages are shown to be accurate and unbiased. Reconstructed LGM and MH climate anomaly patterns are coherent, consistent between variables, and robust with respect to the choice of technique. They support a conceptual model of the controls of Late Quaternary climate change whereby the first-order effects of orbital variations and greenhouse forcing on the seasonal cycle of temperature are predictably modified by responses of the atmospheric circulation and surface energy balance. ?? 2010 The Author(s).

Sedimentary evidence of landscape and climate history since the end of MIS 3 in the Krkonoše Mountains, Czech Republic

NASA Astrophysics Data System (ADS)

Engel, Zbyněk; Nývlt, Daniel; Křížek, Marek; Treml, Václav; Jankovská, Vlasta; Lisá, Lenka

2010-04-01

A sedimentary core recovered from the cirque basin of Labský důl valley (1039 m a.s.l.) in the Krkonoše Mountains reflects the environmental history for approximately the last 30,000 years. Analyses of magnetic susceptibility, carbon content, pollen assemblages and macrofossil data in a 15 m thick sediment sequence provide the first continuous record of Lateglacial and Holocene vegetation history in Sudetes region of the Czech Republic. The succession of sedimentary units in the lower part of the core suggests that the cirque was ice-free before the onset of the last glaciation at the beginning of marine isotope stage 2. Highly variable climate prevailed during this period with cold conditions culminating about 18 cal ka BP. Cold climates persisted until the Lateglacial period, evidenced by an identified warming and subsequent cooling event correlated with the Younger Dryas period. Sparse, treeless vegetation dominated in the catchment area at that time. The sequence of interrupted thinly laminated silts reflects the retreat and temporary readvance of a local glacier in the cirque during 12.5-10.8 cal ka BP. Subsequently, the alpine treeline ecotone gradually shifted above the cirque floor. Palaeoclimatic conditions in the early Holocene fluctuated strongly, whereas since 5.1 cal ka BP conditions have been more stable. Pollen-based climate reconstructions suggest significant cooling at around 9.8-9.3, 7.7-7.5 and 4.0-3.3 cal ka BP. Spruce forests have dominated the site since 5.0 cal ka BP when the vegetation became similar to the modern one. Two phases of increased sedimentation were identified within the Holocene culminating about 9.2-7.5 cal ka BP and 5.8-5.5 cal ka BP. Sediment yield was as high as 2.4 mm yr -1 during the period, reflecting environmental changes during the Atlantic/Sub-Boreal transition.

A composite pollen-based stratotype for inter-regional evaluation of climatic events in New Zealand over the past 30,000 years (NZ-INTIMATE project)

NASA Astrophysics Data System (ADS)

Barrell, David J. A.; Almond, Peter C.; Vandergoes, Marcus J.; Lowe, David J.; Newnham, Rewi M.

2013-08-01

Our review of paleoclimate information for New Zealand pertaining to the past 30,000 years has identified a general sequence of climatic events, spanning the onset of cold conditions marking the final phase of the Last Glaciation, through to the emergence to full interglacial conditions in the early Holocene. In order to facilitate more detailed assessments of climate variability and any leads or lags in the timing of climate changes across the region, a composite stratotype is proposed for New Zealand. The stratotype is based on terrestrial stratigraphic records and is intended to provide a standard reference for the intercomparison and evaluation of climate proxy records. We nominate a specific stratigraphic type record for each climatic event, using either natural exposure or drill core stratigraphic sections. Type records were selected on the basis of having very good numerical age control and a clear proxy record. In all cases the main proxy of the type record is subfossil pollen. The type record for the period from ca 30 to ca 18 calendar kiloyears BP (cal. ka BP) is designated in lake-bed sediments from a small morainic kettle lake (Galway tarn) in western South Island. The Galway tarn type record spans a period of full glacial conditions (Last Glacial Coldest Period, LGCP) within the Otira Glaciation, and includes three cold stadials separated by two cool interstadials. The type record for the emergence from glacial conditions following the termination of the Last Glaciation (post-Termination amelioration) is in a core of lake sediments from a maar (Pukaki volcanic crater) in Auckland, northern North Island, and spans from ca 18 to 15.64 ± 0.41 cal. ka BP. The type record for the Lateglacial period is an exposure of interbedded peat and mud at montane Kaipo bog, eastern North Island. In this high-resolution type record, an initial mild period was succeeded at 13.74 ± 0.13 cal. ka BP by a cooler period, which after 12.55 ± 0.14 cal. ka BP gave way to a

Monsoon source shifts during the drying mid-Holocene: Biomarker isotope based evidence from the core 'monsoon zone' (CMZ) of India

NASA Astrophysics Data System (ADS)

Sarkar, Saswati; Prasad, Sushma; Wilkes, Heinz; Riedel, Nils; Stebich, Martina; Basavaiah, Nathani; Sachse, Dirk

2015-09-01

A better understanding of past variations of the Indian Summer Monsoon (ISM), that plays a vital role for the still largely agro-based economy in India, can lead to a better assessment of its potential impact under global climate change scenarios. However, our knowledge of spatiotemporal patterns of ISM strength is limited due to the lack of high-resolution, continental paleohydrological records. Here, we reconstruct centennial-scale hydrological variability during the Holocene associated to changes in the intensity of the ISM based on a record of lipid biomarker abundances and compound-specific stable isotopic composition of a 10 m long sediment core from saline-alkaline Lonar Lake, situated in the core 'monsoon zone' of central India. We identified three main periods of distinct hydrology during the Holocene in central India. The period between 10.1 and 6 cal ka BP was likely the wettest during the Holocene. Lower average chain length (ACL) index values (29.4-28.6) and negative δ13Cwax values (-34.8‰ to -27.8‰) of leaf wax n-alkanes indicate the dominance of woody C3 vegetation in the catchment, and negative δDwax values (concentration weighted average) (-171‰ to -147‰) suggest a wet period due to an intensified monsoon. After 6 cal ka BP, a gradual shift to less negative δ13Cwax values (particularly for the grass derived n-C31) and appearance of the triterpene lipid tetrahymanol, generally considered as a marker for salinity and water column stratification, mark the onset of drier conditions. At 5.1 cal ka BP an increasing flux of leaf wax n-alkanes along with the highest flux of tetrahymanol indicate a major lowering of the lake level. Between 4.8 and 4 cal ka BP, we find evidence for a transition to arid conditions, indicated by high and strongly variable tetrahymanol flux. In addition, a pronounced shift to less negative δ13Cwax values, in particular for n-C31 (-25.2‰ to -22.8‰), during this period indicates a change of dominant vegetation to

High resolution sedimentary record from the Cocos Ridge: evidence of land-ocean linkages in the Eastern Equatorial Pacific over the last 70 ka

NASA Astrophysics Data System (ADS)

Murdmaa, I.; Ivanova, E.; Leduc, G.; Beaufort, L.; Peresypkin, V.; Vidal, L.; Ovsepyan, E.; Alekhina, G.; Kravtsov, V.; Vasileva, V.

2009-04-01

debris was most intensely washed off the coastal plain at the beginning of post-glacial transgression ~17 cal. ka BP. Glacioeustatic sea level oscillations, along with climate and river runoff changes, controlled variations in the TOM flux throughout the studied interval. The MOM commonly prevails in intervals with a low TOC content, although its relatively high MAR values may also coincide with TOC maxima, as at the beginning of Termination I. The MOM contribution to the total organic matter increased in the Early Holocene, at ~ 8 cal. ka, and especially at ~ 60 cal. ka (possibly coeval with the H-6 event). Relatively low and less variable accumulation rates of MOM, as compared to those of TOM may be explained by the location of the site MD02-2529 between the two high-productivity areas associated with coastal upwellings in the Panama Bight and Gulf of Papagayo. The paleoproductivity estimates based on coccolithophoride counts show a short-term variability with the extremal values during the Termination I. This high-productivity event corresponds to the highest planktic foraminiferal abundance and the maximum values of foraminiferal productivity index. The productivity increase at 16-14 cal ka BP might result from the nutrient rearrangement related to reorganization of the thermohaline circulation over the termination. However, high total abundance of benthic foraminifera and maximum values of several productivity-related benthic species are found at MIS 2, from ~ 25 to 22 cal ka BP. MOM export from the upper continental slope by the bottom nepheloid layer during the LGM sea level lowstand might serve as the food source for this benthic production pulse. Meanwhile, calcareous phytoplankton production seems to remain rather high through the late MIS3 - Termination I and decreased during the Holocene. The low total abundance of planktic foraminifera and an enhanced content of oligotrophic mixed-layer dwelling planktic foraminiferal species in the Holocene sediments

Satellite Ka-band propagation measurements in Florida

NASA Technical Reports Server (NTRS)

Helmken, Henry; Henning, Rudolf

1995-01-01

Commercial growth of interactive, high data rate communication systems is expected to focus on the use of the Ka-band (20/30 GHz) radio spectrum. The ability to form narrow spot beams and the attendant small diameter antennas are attractive features to designers of mobile aeronautical and ground based satellite communication systems. However, Ka-band is strongly affected by weather, particularly rain, and hence systems designs may require a significant link margin for reliable operations. Perhaps the most stressing area in North America, weatherwise, is the Florida sub-tropical climatic region. As part of the NASA Advanced Communications Technology Satellite (ACTS) propagation measurements program, beacon and radiometer data have been recorded since December 1993 at the University of South Florida (USF), Tampa, Florida.

Impact of climate variability on terrestrial environment in Western Europe between 45 and 9 kyr cal. BP: vegetation dynamics recorded by the Bergsee Lake (Black Forest, Germany).

NASA Astrophysics Data System (ADS)

Duprat-Oualid, Fanny; Begeot, Carole; Rius, Damien; Millet, Laurent; Magny, Michel

2016-04-01

Between 9 and 45 kyr cal. BP, two great transitions lead the global climate system to evolve from the Last-Glacial period (115-14.7 kyr cal. BP), to two successive warmer periods, the Late-Glacial Interstadial (14.7-11.7 kyr cal. BP) and the Holocene (11.7-0 kyr cal. BP). δ18O variations recorded in Greenland ice cores (GRIP & NGRIP) revealed high frequency climate variability within the Last Glacial. These reference isotopic records highlighted a succession of centennial-to-millennial warm/cold events, the so-called Greenland Interstadials (GI) and Greenland Stadials (GS). The number continental records about the period 14.7-0 kyr cal. BP is substantial. This allowed to understand the vegetation dynamics in response to climate changes this period at the North-Atlantic scale. However, sequences covering the glacial period (beyond 20 kyr cal.BP) remain rare, because of hiatuses mostly due to local glaciers. Therefore, sedimentary continuous records of vegetation dynamics are still needed to better understand climate changes during the Last Glacial in Western Europe (Heiri et al. 2014). Here we present a new high-resolution pollen record from Lake Bergsee (47°34'20''N, 7°56'11''E, 382 m a.s.l). This lake is located south of Black Forest and north of the Alps, beyond the zone of glaciers maximal extension. Therefore it could have recorded the whole last climatic cycle, i.e. 120-0 kyr cal. BP. In 2013, a 29 m long core was extracted from the Bergsee. According to the depth-age model based on 14C AMS dating and the Laacher See Tephra (LST), the record spans continuously at least the last 45 kyrs. The first series of pollen analysis, focused on the 45-9 kyr cal. BP time window, allows us to reconstruct a precise, faithful and continuous vegetation history at the centennial scale. This high temporal resolution enabled to assess the response of vegetation to secular climate events (e.g. GI-4 = 200 yrs). First, our results show that vegetation responded to climate

Sea level and global ice volumes from the Last Glacial Maximum to the Holocene.

PubMed

Lambeck, Kurt; Rouby, Hélène; Purcell, Anthony; Sun, Yiying; Sambridge, Malcolm

2014-10-28

The major cause of sea-level change during ice ages is the exchange of water between ice and ocean and the planet's dynamic response to the changing surface load. Inversion of ∼1,000 observations for the past 35,000 y from localities far from former ice margins has provided new constraints on the fluctuation of ice volume in this interval. Key results are: (i) a rapid final fall in global sea level of ∼40 m in <2,000 y at the onset of the glacial maximum ∼30,000 y before present (30 ka BP); (ii) a slow fall to -134 m from 29 to 21 ka BP with a maximum grounded ice volume of ∼52 × 10(6) km(3) greater than today; (iii) after an initial short duration rapid rise and a short interval of near-constant sea level, the main phase of deglaciation occurred from ∼16.5 ka BP to ∼8.2 ka BP at an average rate of rise of 12 m⋅ka(-1) punctuated by periods of greater, particularly at 14.5-14.0 ka BP at ≥40 mm⋅y(-1) (MWP-1A), and lesser, from 12.5 to 11.5 ka BP (Younger Dryas), rates; (iv) no evidence for a global MWP-1B event at ∼11.3 ka BP; and (v) a progressive decrease in the rate of rise from 8.2 ka to ∼2.5 ka BP, after which ocean volumes remained nearly constant until the renewed sea-level rise at 100-150 y ago, with no evidence of oscillations exceeding ∼15-20 cm in time intervals ≥200 y from 6 to 0.15 ka BP.

The rise and fall of Lake Bonneville between 45 and 10.5 ka

USGS Publications Warehouse

Benson, L.V.; Lund, S.P.; Smoot, J.P.; Rhode, D.E.; Spencer, R.J.; Verosub, K.L.; Louderback, L.A.; Johnson, C.A.; Rye, R.O.; Negrini, R.M.

2011-01-01

A sediment core taken from the western edge of the Bonneville Basin has provided high-resolution proxy records of relative lake-size change for the period 45.1-10.5 calendar ka (hereafter ka). Age control was provided by a paleomagnetic secular variation (PSV)-based age model for Blue Lake core BL04-4. Continuous records of ??18O and total inorganic carbon (TIC) generally match an earlier lake-level envelope based on outcrops and geomorphic features, but with differences in the timing of some hydrologic events/states. The Stansbury Oscillation was found to consist of two oscillations centered on 25 and 24 ka. Lake Bonneville appears to have reached its geomorphic highstand and began spilling at 18.5 ka. The fall from the highstand to the Provo level occurred at 17.0 ka and the lake intermittently overflowed at the Provo level until 15.2 ka, at which time the lake fell again, bottoming out at ~14.7 ka. The lake also fell briefly below the Provo level at ~15.9 ka. Carbonate and ??18O data indicate that between 14.7 and 13.1 ka the lake slowly rose to the Gilbert shoreline and remained at about that elevation until 11.6 ka, when it fell again. Chemical and sedimentological data indicate that a marsh formed in the Blue Lake area at 10.5 ka.Relatively dry periods in the BL04-4 records are associated with Heinrich events H1-H4, suggesting that either the warming that closely followed a Heinrich event increased the evaporation rate in the Bonneville Basin and (or) that the core of the polar jet stream (PJS) shifted north of the Bonneville Basin in response to massive losses of ice from the Laurentide Ice Sheet (LIS) during the Heinrich event. The second Stansbury Oscillation occurred during Heinrich event H2, and the Gilbert wet event occurred during the Younger Dryas cold interval. Several relatively wet events in BL04-4 occur during Dansgaard-Oeschger (DO) warm events.The growth of the Bear River glacier between 32 and 17 ka paralleled changes in the values of proxy

Multi-proxy dating of Holocene maar lakes and Pleistocene dry maar sediments in the Eifel, Germany

NASA Astrophysics Data System (ADS)

Sirocko, Frank; Dietrich, Stephan; Veres, Daniel; Grootes, Pieter M.; Schaber-Mohr, Katja; Seelos, Klemens; Nadeau, Marie-Josée; Kromer, Bernd; Rothacker, Leo; Röhner, Marieke; Krbetschek, Matthias; Appleby, Peter; Hambach, Ulrich; Rolf, Christian; Sudo, Masafumi; Grim, Stephanie

2013-02-01

During the last twelve years the ELSA Project (Eifel Laminated Sediment Archive) at Mainz University has drilled a total of about 52 cores from 27 maar lakes and filled-in maar basins in the Eifel/Germany. Dating has been completed for the Holocene cores using 6 different methods (210Pb and 137Cs activities, palynostratigraphy, event markers, varve counting, 14C). In general, the different methods consistently complement one another within error margins. Event correlation was used for relating typical lithological changes with historically known events such as the two major Holocene flood events at 1342 AD and ca 800 BC. Dating of MIS2-MIS3 core sections is based on greyscale tuning, radiocarbon and OSL dating, magnetostratigraphy and tephrochronology. The lithological changes in the sediment cores demonstrate a sequence of events similar to the North Atlantic rapid climate variability of the Last Glacial Cycle. The warmest of the MIS3 interstadials was GI14, when a forest with abundant spruce covered the Eifel area from 55 to 48 ka BP, i.e. during a time when also other climate archives in Europe suggested very warm conditions. The forest of this "Early Stage 3 warm phase" developed subsequently into a steppe with scattered birch and pine, and finally into a glacial desert at around 25 ka BP. Evidence for Mono Lake and Laschamp geomagnetic excursions is found in two long cores. Several large eruptions during Middle and Late Pleistocene (Ulmener Maar - 11,000 varve years BP, Laacher See - 12,900 varve years BP, Mosenberg volcanoes/Meerfelder Maar 41-45 cal ka BP, Dümpel Maar 116 ka BP, Glees Maar - 151 ka BP) produced distinct ash-layers crucial for inter-core and inter-site correlations. The oldest investigated maar of the Eifel is 40Ar/39Ar dated to the time older than 520 ka BP.

Holocene Activity of the Enriquillo-Plantain Garden Fault in Lake Enriquillo Derived from Seismic Stratigraphy

NASA Astrophysics Data System (ADS)

Rios, J. K.; McHugh, C. M.; Hornbach, M. J.; Mann, P.; Wright, V. D.; Gurung, D.

2013-12-01

The Enriquillo-Plantain-Garden fault zone (EPGF) crosses Lake Enriquillo (LE) in the Dominican Republic and extends E-W across the southern peninsula of Haiti, south of the Baie de Port au Prince (BPP). Seismic stratigraphic studies of CHIRP high-resolution subbottom profiles calibrated to ages obtained from sediment cores and previous coral reef studies provide a Holocene record of relative sea level rise into the BPB and LE and a time frame for understanding tectonics of the EPGF. The BPP is 20 km wide, 20 km long, 150 m deep, and surrounded by coral reefs at water depths of 30 m. Three seismic units were identified: Unit 1: stepped terraces 5-10 m high. Laminated strata onlaps the terraces. This unit possibly represents Marine Isotope Stages 6 and 5, but has not been dated. Unit 2: laminated strata, thicker than 10 m and dated near its top at 22 ka BP. The microfossil assemblages reveal that during the latest Pleistocene sea level lowstand the BPP had a restricted connection with the global ocean. Few well-preserved marine microfossils are present and mostly are reworked. Geochemical analyses reveal that the laminated sediments were deposited during wet periods (>Si, Al wt %, Cu ppm) and dry periods (>Ca wt %). Unit 3: acoustically transparent, ~10 m thick, dated near its base and top at 14 ka BP and 2 ka BP, respectively. This unit represents the Holocene initiation of sea level rise and high stand containing well-preserved marine fossils. At ~9.5 ka BP planktonic foraminifers become abundant implying deepening of marine waters. Lake Enriquillo is 127 km east of the BPP. It is 15 km wide, 40 km long and 45 m deep. CHIRP subbottom profiles penetrated ~30 m below the lake floor. Four main acoustic units were identified: Unit 1: deformed basement with steeply dipping and folded beds. Based on land studies this unit is likely Plio-Pleistocene in age. Unit 2: laminated strata. Ages from coral reefs and deformed strata on land indicate this unit is likely pre-20 ka

Designing Web-Based Science Lesson Plans That Use Problem-Based Learning To Inspire Middle School Kids: KaAMS (Kids as Airborne Mission Scientists).

ERIC Educational Resources Information Center

Koszalka, Tiffany A.; Grabowski, Barbara; Kim, Younghoon

Problem-based learning (PBL) has great potential for inspiring K-12 learning. KaAMS (Kids as Airborne Mission Scientists), an example of PBL, was designed to help teachers inspire middle school students to learning science, math, technology, and geography. The children participate as scientists investigating environmental problems using NASA…

Technical note: comparability of Hrdlička's Catalog of Crania data based on measurement landmark definitions.

PubMed

Stojanowski, Christopher M; Euber, Julie K

2011-09-01

Archival sources of data are critical anthropological resources that inform inferences about human biology and evolutionary history. Craniometric data are one of the most widely available sources of information on human population history because craniometrics were critical in early 20th century debates about race and biological variation. As such, extensive databases of raw craniometric data were published at the same time that the field was working to standardize measurement protocol. Hrdlička published between 10 and 16 raw craniometric variables for over 8,000 individuals in a series of seven catalogs throughout his career. With a New World emphasis, Hrdlička's data complement those of Howells (1973, 1989) and the two databases have been combined in the past. In this note we verify the consistency of Hrdlička's measurement protocol throughout the Catalog series and compare these definitions to those used by Howells. We conclude that 12 measurements are comparable throughout the Catalogs, with five of these equivalent to Howells' measurements: maximum cranial breadth (XCB), basion-bregma height (BBH), maximum bizygomatic breadth (ZYB), nasal breadth (NLB), and breadth of the upper alveolar arch (MAB). Most of Hrdlička's measurements are not strictly comparable to those of Howells, thus limiting the utility of combined datasets for multivariate analysis. Four measurements are inconsistently defined by Hrdlička and we recommend not using these data: nasal height, orbit breadth, orbit height, and menton-nasion height. This note promotes Hrdlička's tireless efforts at data collection and re-emphasizes observer error as a legitimate concern in craniometry as the field shifts to morphometric digital data acquisition. 2011 Wiley-Liss, Inc.

Quantitative summer and winter temperature reconstructions from pollen and chironomid data in the Baltic-Belarus area

NASA Astrophysics Data System (ADS)

Veski, Siim; Seppä, Heikki; Stančikaitė, Migle; Zernitskaya, Valentina; Reitalu, Triin; Gryguc, Gražyna; Heinsalu, Atko; Stivrins, Normunds; Amon, Leeli; Vassiljev, Jüri; Heiri, Oliver

2015-04-01

Quantitative reconstructions based on fossil pollen and chironomids are widely used and useful for long-term climate variability estimations. The Lateglacial and early Holocene period (15-8 ka BP) in the Baltic-Belarus (BB) area between 60°-51° N was characterized by sudden shifts in climate due to various climate forcings affecting the climate of the northern hemisphere and North Atlantic, including the proximity of receding ice sheets. Climate variations in BB during the LG were eminent as the southern part of the region was ice free during the Last Glacial Maximum over 19 ka BP, whereas northern Estonia became ice free no sooner than 13 ka BP. New pollen based reconstructions of summer (May-to-August) and winter (December-to-February) temperatures between 15-8 ka BP along a S-N transect in the BB area display trends in temporal and spatial changes in climate variability. These results are completed by two chironomid-based July mean temperature reconstructions (Heiri et al. 2014). The magnitude of change compared with modern temperatures was more prominent in the northern part of BB area than in the southern part. The 4 °C winter and 2 °C summer warming at the start of GI-1 was delayed in the BB area and Lateglacial maximum temperatures were reached at ca 13.6 ka BP, being 4 °C colder than the modern mean. The Younger Dryas cooling in the area was 5 °C colder than present as inferred by all proxies (Veski et al. in press). In addition, our analyses show an early Holocene divergence in winter temperature trends with modern values reaching 1 ka earlier (10 ka BP) in southern BB compared to the northern part of the region (9 ka BP). Heiri, O., Brooks, S.J., Renssen, H., Bedford, A., Hazekamp, M., Ilyashuk, B., Jeffers, E.S., Lang, B., Kirilova, E., Kuiper, S., Millet, L., Samartin, S., Toth, M., Verbruggen, F., Watson, J.E., van Asch, N., Lammertsma, E., Amon, L., Birks, H.H., Birks, J.B., Mortensen, M.F., Hoek, W.Z., Magyari, E., Muñoz Sobrino, C., Seppä, H

Sea level and global ice volumes from the Last Glacial Maximum to the Holocene

PubMed Central

Lambeck, Kurt; Rouby, Hélène; Purcell, Anthony; Sun, Yiying; Sambridge, Malcolm

2014-01-01

The major cause of sea-level change during ice ages is the exchange of water between ice and ocean and the planet’s dynamic response to the changing surface load. Inversion of ∼1,000 observations for the past 35,000 y from localities far from former ice margins has provided new constraints on the fluctuation of ice volume in this interval. Key results are: (i) a rapid final fall in global sea level of ∼40 m in <2,000 y at the onset of the glacial maximum ∼30,000 y before present (30 ka BP); (ii) a slow fall to −134 m from 29 to 21 ka BP with a maximum grounded ice volume of ∼52 × 106 km3 greater than today; (iii) after an initial short duration rapid rise and a short interval of near-constant sea level, the main phase of deglaciation occurred from ∼16.5 ka BP to ∼8.2 ka BP at an average rate of rise of 12 m⋅ka−1 punctuated by periods of greater, particularly at 14.5–14.0 ka BP at ≥40 mm⋅y−1 (MWP-1A), and lesser, from 12.5 to 11.5 ka BP (Younger Dryas), rates; (iv) no evidence for a global MWP-1B event at ∼11.3 ka BP; and (v) a progressive decrease in the rate of rise from 8.2 ka to ∼2.5 ka BP, after which ocean volumes remained nearly constant until the renewed sea-level rise at 100–150 y ago, with no evidence of oscillations exceeding ∼15–20 cm in time intervals ≥200 y from 6 to 0.15 ka BP. PMID:25313072

A 62 ka record from the WAIS Divide ice core with annual resolution to 30 ka (so far)

NASA Astrophysics Data System (ADS)

Fudge, T. J.; Taylor, K.; McGwire, K.; Brook, E.; Sowers, T.; Steig, E.; White, J.; Vaughn, B.; Bay, R.; McConnell, J.; Waddington, E.; Conway, H.; Clow, G.; Cuffey, K.; Cole-Dai, J.; Ferris, D.; Severinghaus, J.

2012-04-01

Drilling of the West Antarctic Ice Sheet (WAIS) Divide ice core has been completed to a depth of 3400 m, about 60 meters above the bed. We present an annually resolved time scale for the most recent 30ka (to 2800 m) based on electrical conductivity measurements, called "timescale WDC06A-5". Below 2800 m the ice is dated by matching isotopes, methane, and/or dust records to other ice cores. Optical borehole logging provides stratigraphic ties to other cores for the bottom-most 75 m that was drilled in December 2011, and indicates the bottom-most ice has an age of 62 ka. The relatively young ice at depth is likely the result of basal melting. The inferred annual layer thickness of the deep ice is >1 cm, suggesting that annual layer counting throughout the entire core may be possible with continuous flow analysis of the ice core chemistry; however, the annual signal in the electrical measurements fades at about 30 ka. We compare the WDC06A-5 timescale through the glacial-interglacial transition with the Greenland GICC05 and GISP2 timescales via rapid variations in methane. We calculate a preliminary delta-age with: 1) accumulation rate inferred from the annual layer thicknesses and thinning functions computed with a 1-D ice flow model, and 2) surface temperature inferred from the low resolution d18O record and a preliminary borehole temperature profile. The WDC06A-5 timescale agrees with the GICC05 and GISP2 timescales to within decades at the 8.2k event and the ACR termination (Younger Dryas/Preboreal transition, 11.7 ka). This is within the delta-age and correlation uncertainties. At the rapid methane drop at ~12.8 ka, the WDC06A-5 timescale is ~150 years older than GICC05 and ~90 older than GISP2; while at ~14.8 ka, the timescales once again agree within the delta-age and correlation uncertainties. The cause of the age discrepancy at 12.8 ka is unclear. We also compare the WDC06A-5 timescale at Dansgaard-Oeschger events 3 and 4 (~27.5 and 29 ka) to the

Research on AHP decision algorithms based on BP algorithm

NASA Astrophysics Data System (ADS)

Ma, Ning; Guan, Jianhe

2017-10-01

Decision making is the thinking activity that people choose or judge, and scientific decision-making has always been a hot issue in the field of research. Analytic Hierarchy Process (AHP) is a simple and practical multi-criteria and multi-objective decision-making method that combines quantitative and qualitative and can show and calculate the subjective judgment in digital form. In the process of decision analysis using AHP method, the rationality of the two-dimensional judgment matrix has a great influence on the decision result. However, in dealing with the real problem, the judgment matrix produced by the two-dimensional comparison is often inconsistent, that is, it does not meet the consistency requirements. BP neural network algorithm is an adaptive nonlinear dynamic system. It has powerful collective computing ability and learning ability. It can perfect the data by constantly modifying the weights and thresholds of the network to achieve the goal of minimizing the mean square error. In this paper, the BP algorithm is used to deal with the consistency of the two-dimensional judgment matrix of the AHP.

A lithology identification method for continental shale oil reservoir based on BP neural network

NASA Astrophysics Data System (ADS)

Han, Luo; Fuqiang, Lai; Zheng, Dong; Weixu, Xia

2018-06-01

The Dongying Depression and Jiyang Depression of the Bohai Bay Basin consist of continental sedimentary facies with a variable sedimentary environment and the shale layer system has a variety of lithologies and strong heterogeneity. It is difficult to accurately identify the lithologies with traditional lithology identification methods. The back propagation (BP) neural network was used to predict the lithology of continental shale oil reservoirs. Based on the rock slice identification, x-ray diffraction bulk rock mineral analysis, scanning electron microscope analysis, and the data of well logging and logging, the lithology was divided with carbonate, clay and felsic as end-member minerals. According to the core-electrical relationship, the frequency histogram was then used to calculate the logging response range of each lithology. The lithology-sensitive curves selected from 23 logging curves (GR, AC, CNL, DEN, etc) were chosen as the input variables. Finally, the BP neural network training model was established to predict the lithology. The lithology in the study area can be divided into four types: mudstone, lime mudstone, lime oil-mudstone, and lime argillaceous oil-shale. The logging responses of lithology were complicated and characterized by the low values of four indicators and medium values of two indicators. By comparing the number of hidden nodes and the number of training times, we found that the number of 15 hidden nodes and 1000 times of training yielded the best training results. The optimal neural network training model was established based on the above results. The lithology prediction results of BP neural network of well XX-1 showed that the accuracy rate was over 80%, indicating that the method was suitable for lithology identification of continental shale stratigraphy. The study provided the basis for the reservoir quality and oily evaluation of continental shale reservoirs and was of great significance to shale oil and gas exploration.

New Progress in Paleoearthquake Studies of the East Sertengshan Piedmont Fault, Inner Mongolia, China

NASA Astrophysics Data System (ADS)

He, Zhongtai

2017-04-01

The two eastern segments of the Sertengshan piedmont fault have moved considerably since the Holocene. Several paleoseismic events have occurred along the fault since 30 ka BP. Paleoearthquake studies have been advanced by digging new trenches and combining the results with the findings of previous studies. Comprehensive analyses of the trenches revealed that 6 paleoseismic events have occurred on the Kuoluebulong segment since approximately 30 ka BP within the following successive time periods: 19.01-37.56 ka, 18.73 ka, 15.03-15.86 ka, 10.96 ka, 5.77-6.48 ka and 2.32 ka BP. The analyses also revealed that 6 paleoseismic events have occurred on the Dashetai segment since approximately 30 ka BP, and the successive occurrence times are 29.07 ka, 19.12-28.23 ka, 13.92-15.22 ka, 9.38-9.83 ka, 6.08-8.36 ka and 3.59 ka BP. The results indicate that quasi-periodic recurrences occurred along the two segments with an approximate 4000 a mean recurrence interval. The consistent timing of the 6 events between the two segments indicates that the segments might conform to the cascade rupturing model between the two segments of the Sertengshan piedmont fault. The latest event on the Kuoluebulong segment of the Sertengshan piedmont fault is the historical M8 earthquake that occurred on November 11, 7 BC, which was recorded by a large number of Chinese historical texts.

Enzyme-triggered delivery of chlorambucil from conjugates based on the cell-penetrating peptide BP16.

PubMed

Soler, Marta; González-Bártulos, Marta; Figueras, Eduard; Ribas, Xavi; Costas, Miquel; Massaguer, Anna; Planas, Marta; Feliu, Lidia

2015-02-07

The undecapeptide KKLFKKILKKL-NH2 (BP16) is a non-toxic cell-penetrating peptide (CPP) that is mainly internalized into cancer cells through a clathrin dependent endocytic mechanism and localizes in late endosomes. Moreover, this CPP is able to enhance the cellular uptake of chlorambucil (CLB) improving its cytotoxicity. In this work, we further explored the cell-penetrating properties of BP16 and those of its arginine analogue BP308. We investigated the influence on the cytotoxicity and on the cellular uptake of conjugating CLB at the N- or the C-terminal end of these undecapeptides. The effect of incorporating the cathepsin B-cleavable sequence Gly-Phe-Leu-Gly in CLB-BP16 and CLB-BP308 conjugates was also evaluated. The activity of CLB was significantly improved when conjugated at the N- or the C-terminus of BP16, or at the N-terminus of BP308. While CLB alone was not active (IC50 of 73.7 to >100 μM), the resulting conjugates displayed cytotoxic activity against CAPAN-1, MCF-7, PC-3, 1BR3G and SKMEL-28 cell lines with IC50 values ranging from 8.7 to 25.5 μM. These results were consistent with the internalization properties observed for the corresponding 5(6)-carboxyfluorescein-labeled conjugates. The presence of the tetrapeptide Gly-Phe-Leu-Gly at either the N- or the C-terminus of CLB-BP16 conjugates further increased the efficacy of CLB (IC50 of 3.6 to 16.2 μM), which could be attributed to its selective release in the lysosomal compartment. Enzymatic assays with cathepsin B showed the release of CLB-Gly-OH from these sequences within a short time. Therefore, the combination of BP16 with an enzymatic cleavable sequence can be used as a drug delivery system for the effective uptake and release of drugs in cancer cells.

Use of natural diamonds to monitor 14C AMS instrument backgrounds

NASA Astrophysics Data System (ADS)

Taylor, R. E.; Southon, John

2007-06-01

To examine one component of the instrument-based background in the University of California Keck Carbon Cycle AMS spectrometer, we have obtained measurements on a set of natural diamonds pressed into sample holders. Natural diamond samples (N = 14) from different sources within rock formations with geological ages greatly in excess of 100 Ma yielded a range of currents (∼110-250 μA 12C- where filamentous graphite typically yields ∼150 μA 12C-) and apparent 14C ages (64.9 ± 0.4 ka BP [0.00031 ± 0.00002 fm] to 80.0 ± 1.1 ka BP [0.00005 ± 0.00001 fm]). Six fragments cut from a single diamond exhibited essentially identical 14C values - 69.3 ± 0.5 ka-70.6 ± 0.5 ka BP. The oldest 14C age equivalents were measured on natural diamonds which exhibited the highest current yields.

Prediction of pKa Values for Neutral and Basic Drugs based on Hybrid Artificial Intelligence Methods.

PubMed

Li, Mengshan; Zhang, Huaijing; Chen, Bingsheng; Wu, Yan; Guan, Lixin

2018-03-05

The pKa value of drugs is an important parameter in drug design and pharmacology. In this paper, an improved particle swarm optimization (PSO) algorithm was proposed based on the population entropy diversity. In the improved algorithm, when the population entropy was higher than the set maximum threshold, the convergence strategy was adopted; when the population entropy was lower than the set minimum threshold the divergence strategy was adopted; when the population entropy was between the maximum and minimum threshold, the self-adaptive adjustment strategy was maintained. The improved PSO algorithm was applied in the training of radial basis function artificial neural network (RBF ANN) model and the selection of molecular descriptors. A quantitative structure-activity relationship model based on RBF ANN trained by the improved PSO algorithm was proposed to predict the pKa values of 74 kinds of neutral and basic drugs and then validated by another database containing 20 molecules. The validation results showed that the model had a good prediction performance. The absolute average relative error, root mean square error, and squared correlation coefficient were 0.3105, 0.0411, and 0.9685, respectively. The model can be used as a reference for exploring other quantitative structure-activity relationships.

21,000 years of Ethiopian African monsoon variability recorded in sediments of the western Nile deep-sea fan: impact of the Nile freshwater inflow for the Mediterranean thermo-haline circulation

NASA Astrophysics Data System (ADS)

Revel, Marie; Colin, Christophe; Bernasconi, Stephano; Combourieu-Nebout, Nathalie; Ducassou, Emmanuelle; Rolland, Yann; Bosch, Delphine

2014-05-01

The Nile delta sedimentation constitutes a continuous high resolution (1.6 mm/year) record of Ethiopian African monsoon regime intensity. Multiproxy analyses performed on core MS27PT recovered in hemipelagic Nile sediment margin (<90 km outward of the Rosetta mouth of the Nile) allow the quantification of the Saharan aeolian dust and the Blue/White Nile River suspended matter frequency fluctuations during the last 21 cal. ka BP. The radiogenic Sr and Nd isotopes, clay mineralogy, bulk elemental composition and palynological analyses reveal large changes in source components, oscillating between a dominant aeolian Saharan contribution during the LGM and the Late Holocene (~4 to 2 cal. ka BP), a dominant Blue/Atbara Nile River contribution during the early Holocene (15 to 8.4 cal. ka BP) and a probable White Nile River contribution during the Middle Holocene (8.4 to 4 cal. ka BP). The following main features are highlighted: 1. The rapid shift from the LGM arid conditions to the African Humid Period (AHP) started at about 15 cal. ka BP. AHP extends until 8.4 cal. ka BP, and we suggest that the Ethiopian African Monsoon maximum between 12 and 8 cal. ka BP is responsible for a larger Blue/Atbara Nile sediment load and freshwater input into the Eastern Mediterranean Sea. 2. The transition between the AHP and the arid Late Holocene is gradual and occurs in two main phases between 8.4 and 6.5 cal. ka BP and 6.5 to 3.2 cal. ka BP. We suggest that the main rain belt shifted southward from 8.4 to ~4 cal. ka BP and was responsible for progressively reduced sediment load and freshwater input into the eastern Mediterranean Sea. 3. The aridification along the Nile catchments occurred from ~4 to 2 cal. ka BP. A dry period, which culminates at 3.2 cal. ka BP, and seems to coincide with a re-establishment of increased oceanic primary productivity in the western Mediterranean Sea. We postulate that the decrease in thermo-haline water Mediterranean circulation could be part of a

An object recognition method based on fuzzy theory and BP networks

NASA Astrophysics Data System (ADS)

Wu, Chuan; Zhu, Ming; Yang, Dong

2006-01-01

It is difficult to choose eigenvectors when neural network recognizes object. It is possible that the different object eigenvectors is similar or the same object eigenvectors is different under scaling, shifting, rotation if eigenvectors can not be chosen appropriately. In order to solve this problem, the image is edged, the membership function is reconstructed and a new threshold segmentation method based on fuzzy theory is proposed to get the binary image. Moment invariant of binary image is extracted and normalized. Some time moment invariant is too small to calculate effectively so logarithm of moment invariant is taken as input eigenvectors of BP network. The experimental results demonstrate that the proposed approach could recognize the object effectively, correctly and quickly.

Advances in Ka-Band Communication System for CubeSats and SmallSats

NASA Technical Reports Server (NTRS)

Kegege, Obadiah; Wong, Yen F.; Altunc, Serhat

2016-01-01

A study was performed that evaluated the feasibility of Ka-band communication system to provide CubeSat/SmallSat high rate science data downlink with ground antennas ranging from the small portable 1.2m/2.4m to apertures 5.4M, 7.3M, 11M, and 18M, for Low Earth Orbit (LEO) to Lunar CubeSat missions. This study included link analysis to determine the data rate requirement, based on the current TRL of Ka-band flight hardware and ground support infrastructure. Recent advances in Ka-band transceivers and antennas, options of portable ground stations, and various coverage distances were included in the analysis. The link/coverage analysis results show that Cubesat/Smallsat missions communication requirements including frequencies and data rates can be met by utilizing Near Earth Network (NEN) Ka-band support with 2 W and high gain (>6 dBi) antennas.

28-ka History of Sea Surface Temperature, Primary Productivity and Planktonic Community Variability in the Western Arabian Sea

NASA Astrophysics Data System (ADS)

Pourmand, A.; Marcantonio, F.; Bianchi, T.

2006-12-01

Uranium-series radionuclides and organic compounds, which represent major groups of planktonic organisms, have been measured in western Arabian Sea sediments that span the past 28 ka. Variability of the Indian Ocean monsoons and their influence on primary productivity, sea surface temperature (SST), and planktonic community structure has been investigated. The average alkenone-derived SST for the glacial was ~3°C lower than that measured for the Holocene. We also identify, for the first time, an interval of exceptionally low SSTs between 19-18.1 ka BP (15.3°C at 18.5 ka). During this time, the low SSTs coincide with high cumulative biomarker fluxes (CBF). We propose that intensification of winter northeast monsoon winds during the glacial period resulted in cold SSTs, deep convective mixing, and enhanced primary productivity. Following the last termination, and within the Holocene, SSTs vary by ~2°C with high CBFs occurring at times of relatively warmer SSTs. The fluxes of dinoflagellates and zooplankton relative to the total flux of organisms remain constant throughout the record. However, transitioning from the glacial to the Holocene, diatom fluxes comparatively increase relative to the total flux of organisms, while those of coccolithophorids decrease. Considering that the Indian Ocean monsoons are an important component of the global climate system, a shift in the planktonic ecosystem structure in the Arabian Sea may have important implications for the global biogeochemical cycle of carbon.

ELECTRONIC STRUCTURE AND LINEAR OPTICAL PROPERTIES OF MIXED ALKALI-METAL BOROPHOSPHATES (LiK2BP2O8, Li3K2BP4O14): A FIRST-PRINCIPLES STUDY

NASA Astrophysics Data System (ADS)

Zhang, Bei; Jing, Qun; Yang, Zhihua; Wang, Ying; Su, Xin; Pan, Shilie; Zhang, Jun

2013-07-01

LiK2BP2O8 and Li3K2BP4O14 are synthesized by high-temperature solution method with the same elements, while contain different fundamental building units. Li3K2BP4O14 is a novel P-O-P linking structure which gives a rare example of violation of Pauling's fourth rule. The electronic structures of LiK2BP2O8 and Li3K2BP4O14 are investigated by density functional calculations. Direct gaps of 5.038 eV (LiK2BP2O8) and 5.487 eV (Li3K2BP4O14) are obtained. By analyzing the density of states (DOS) of LiK2BP2O8 and Li3K2BP4O14, the P-O-P linking in fundamental building units of Li3K2BP4O14 crystal is proved theoretically. Based on the electronic properties, the linear optical information is captured.

Usefulness of Enzyme-linked Immunosorbent Assay Using Recombinant BP180 and BP230 for Serodiagnosis and Monitoring Disease Activity of Bullous Pemphigoid

PubMed Central

Lee, Eui Hyung; Kim, Yeon Hee; Kim, Sinyoung; Kim, Song-ee

2012-01-01

Background Bullous pemphigoid (BP) is an autoimmune subepidermal bullous disease associated with autoantibodies against BP180 and BP230. Enzyme-linked immunosorbent assay (ELISA) is a sensitive tool for the detection of immunoglobulin G (IgG) anti-BP180 and anti-BP230 autoantibodies. Objective The aim of this study was to evaluate the usefulness of ELISA for diagnosing and monitoring the disease activity of BP. Methods We evaluated serum IgG levels of anti-BP180 and anti-BP230 autoantibodies in 47 BP patients, 16 epidermolysis bullosa aquisita patients, and 15 healthy volunteers using ELISA. Through retrospective review of the medical records, the clinical characteristics of BP including disease activity, duration, pruritus severity and peripheral blood eosinophil counts were assessed. Results The sensitivity of BP180 ELISA was 97.9%, BP230 ELISA 72.3%, and a combination of the two was 100%. The specificity of BP180 ELISA was 90.3%, BP230 ELISA 100%, and a combination of the two was 90.3%. BP180 ELISA scores showed strong associations with disease activity, pruritus severity, peripheral blood eosinophil counts, and disease duration, whereas BP230 ELISA scores did not. Conclusion BP180 and BP230 ELISAs are highly sensitive methods for the diagnosis of BP, and BP180 ELISA, in particular, is a sensitive tool for monitoring the disease activity of BP. PMID:22363155

Sensitivity of sediment magnetic records to climate change during Holocene for the northern South China Sea

NASA Astrophysics Data System (ADS)

Ouyang, Tingping; Li, Mingkun; Zhao, Xiang; Zhu, Zhaoyu; Tian, Chengjing; Qiu, Yan; Peng, Xuechao; Hu, Qiao

2016-05-01

Magnetic property has been proved to be a sensitive proxy to climate change for both terrestrial and marine sediments. Based on the schedule frame established by AMS 14C dating of foraminifera, detail magnetic analyses were performed for core PC24 sediments at sampling intervals of 2 cm to discuss magnetic sensitivity of marine sediment to climate during Holocene for the northern South China Sea. The results indicated that: 1) Concentration dependent magnetic parameters are positive corresponding to variation of temperature. The frequency dependent susceptibility coefficient basically reflected the variation in humidity; 2) XARM/SIRM was more sensitive to detrital magnetite particles and SIRM/X was more effective to biogenic magnetite particles. Variations of XARM/SIRM and SIRM/X are corresponding to precipitation and temperature, respectively; 3) the Holocene Megathermal in the study area was identified as 7.5-3.4 cal. ka BP. The warmest stage of Holocene for the study area should be during 6.1 to 3.9 cal. ka BP; 4) The 8 ka cold event was characterized as cold and dry during 8.55 to 8.25 cal. ka BP; 5) During early and middle Holocene, the climate combinations were warm dry and cold wet. It turned to warm and wet after 2.7 cal. ka BP.

Geomagnetic Dipole Lows and Excursions of the last 800 ka : connection with Interglacials and/or low Obliquity Times?

NASA Astrophysics Data System (ADS)

Thouveny, N.

2006-12-01

Paleomagnetic directions, relative paleointensities (RPI) and authigenic 10Be/9Be ratio were measured along sedimentary clayey-carbonate sequences in high accumulation rate sites of the Portuguese margin (0-400 ka BP) and West-Equatorial Pacific (600-1300 ka BP. Series of high and low RPI features are placed on the chronological scale using C-14 ages, using correlations with of delta O-18 records with the Greenland ice cores and SPECMAP records, and using the ages of polarity reversals. During the time intervals of dramatically low RPI anomalous paleodirections document excursions or polarity reversals. Significant peaks of the authigenic 10Be/9Be ratio point in stratigraphic layers recording all low RPI phases. Plotted against RPI data the 10Be/9Be ratios statistically follow the expected power law (Elsasser et al. ,1958 and Lal, 1988), which strongly establishes the unique and direct link between the recorded cosmogenic enhancement and dipole moment loss, allowing us to univocally interpret our 10Be/9Be ratio and RPI records in terms of geomagnetic dipole moment lows and highs (DML and DMH) alternation. delta O-18 records of the same cores (e.g. Abreu et al. 2004), provide the frame to interpret dipole moment variations in a paleoclimatic context within strict stratigraphic terms. We note that most DML of the last 400 ka fall in the end of interglacial stages, while DMH are rather related with full glacials. We then confirm this coincidence, though whithout strict stratigraphic control, by comparing the SINT-800 curve (Guyodo and Valet, 1999) and the S. E. Pacific near Sea Floor mag. record (Gee et al., 2000), with the highest resolution 18O record yet available (Bassinot et al. 1994). Complex Wavelet analyses using modulus and phase reveal that the geomagnetic moment proxy records contain a maximum power for periods between 30 and 100 ka. DML do not occur in any fixed eccentricity context, but several DML fall at the time of obliquity minima. The comparison of

An ostracode based paleolimnologic and paleohydrologic history of Death Valley: 200 to 0 ka

USGS Publications Warehouse

Forester, R.M.; Lowenstein, T.K.; Spencer, R.J.

2005-01-01

Death Valley, a complex tectonic and hydrologic basin, was cored from its lowest surface elevation to a depth of 186 m. The sediments range from bedded primary halite to black muds. Continental ostracodes found in the black muds indicate that those sediments were deposited in a variety of hydrologic settings ranging from deep, relatively fresh water to shallow saline lakes to spring discharge supported wetlands. The alkaline-enriched, calcium-depleted paleolake waters indicate extrabasinal streamflow and basin-margin spring discharge. The alkaline-depleted, calcium-enriched paleowetland waters indicate intrabasinal spring discharge. During Marine Isotope Stage 6 (MIS 6, ca. 180-140 ka) the hydrologic settings were highly variable, implying that complex relations existed between climate and basin hydrology. Termination II (MIS 6 to MIS 5E) was a complex multicyclic sequence of paleoenvironments, implying that climates oscillated between high and low effective moisture. MIS 4 (ca. 73-61 ka) was a spring discharge supported wetland complex. During MIS 2 (ca. 20-12 ka) the hydrologic settings were variable, although they are not fully understood because some black muds deposited during that time were lost during coring. ?? 2005 Geological Society of America.

A light intensity monitoring method based on fiber Bragg grating sensing technology and BP neural network

NASA Astrophysics Data System (ADS)

Li, Lu-Ming; Zhu, Qian; Zhang, Zhi-Guo; Cai, Zhi-Min; Liao, Zhi-Jun; Hu, Zhen-Yan

2017-04-01

In this paper, a light intensity monitoring method based on FBG is proposed. The method establishes a light intensity monitoring model with cantilever beam structure and BP neural network algorithm, which is based on fiber grating sensing technology. The accuracy of the model can meet the requirements of engineering project and it can monitor light intensity in real time. The experimental results show that the method has good stability and high sensitivity.

Research on wind field algorithm of wind lidar based on BP neural network and grey prediction

NASA Astrophysics Data System (ADS)

Chen, Yong; Chen, Chun-Li; Luo, Xiong; Zhang, Yan; Yang, Ze-hou; Zhou, Jie; Shi, Xiao-ding; Wang, Lei

2018-01-01

This paper uses the BP neural network and grey algorithm to forecast and study radar wind field. In order to reduce the residual error in the wind field prediction which uses BP neural network and grey algorithm, calculating the minimum value of residual error function, adopting the residuals of the gray algorithm trained by BP neural network, using the trained network model to forecast the residual sequence, using the predicted residual error sequence to modify the forecast sequence of the grey algorithm. The test data show that using the grey algorithm modified by BP neural network can effectively reduce the residual value and improve the prediction precision.

Dichroic Filter for Separating W-Band and Ka-Band

NASA Technical Reports Server (NTRS)

Epp, Larry W.; Durden, Stephen L.; Jamnejad, Vahraz; Long, Ezra M.; Sosnowski, John B.; Higuera, Raymond J.; Chen, Jacqueline C.

2012-01-01

The proposed Aerosol/Cloud/Ecosystems (ACEs) mission development would advance cloud profiling radar from that used in CloudSat by adding a 35-GHz (Ka-band) channel to the 94-GHz (W-band) channel used in CloudSat. In order to illuminate a single antenna, and use CloudSat-like quasi-optical transmission lines, a spatial diplexer is needed to add the Ka-band channel. A dichroic filter separates Ka-band from W-band by employing advances in electrical discharge machining (EDM) and mode-matching analysis techniques developed and validated for designing dichroics for the Deep Space Network (DSN), to develop a preliminary design that both met the requirements of frequency separation and mechanical strength. First, a mechanical prototype was built using an approximately 102-micron-diameter EDM process, and tolerances of the hole dimensions, wall thickness, radius, and dichroic filter thickness measured. The prototype validated the manufacturing needed to design a dichroic filter for a higher-frequency usage than previously used in the DSN. The initial design was based on a Ka-band design, but thicker walls are required for mechanical rigidity than one obtains by simply scaling the Ka-band dichroic filter. The resulting trade of hole dimensions for mechanical rigidity (wall thickness) required electrical redesign of the hole dimensions. Updates to existing codes in the linear solver decreased the analysis time using mode-matching, enabling the electrical design to be realized quickly. This work is applicable to missions and instruments that seek to extend W-band cloud profiling measurements to other frequencies. By demonstrating a dichroic filter that passes W-band, but reflects a lower frequency, this opens up the development of instruments that both compare to and enhance CloudSat.

New insights on water level variability for Lake Turkana for the past 15 ka and at 150 ka from relict beaches

NASA Astrophysics Data System (ADS)

Forman, S. L.; Wright, D.

2015-12-01

Relict beaches adjacent to Lake Turkana provide a record of water level variability for the Late Quaternary. This study focused on deciphering the geomorphology, sedimentology, stratigraphy and 14C chronology of strand plain sequences in the Kalokol and Lothagam areas. Nine >30 m oscillations in water level were documented between ca. 15 and 4 ka. The earliest oscillation between ca. 14.5 and 13 ka is not well constrained with water level to at least 70 m above the present surface and subsequently fell to at least 50 m. Lake level increased to ~ 90 m between ca. 11.2 and 10.4 ka, post Younger Dryas cooling. Water level fell by >30 m by 10.2 ka, with another potential rise at ca. 8.5 ka to >70 m above current level. Lake level regressed by > 40 m at 8.2 ka coincident with cooling in the equatorial Eastern Atlantic Ocean. Two major >70 m lake level oscillations centered at 6.6 and 5.2 ka may reflect enhanced convection with warmer sea surface temperatures in the Western Indian Ocean. The end of the African Humid Period occurred from ca. 8.0 to 4.5 ka and was characterized by variable lake level (± > 40 m), rather than one monotonic fall in water level. This lake level variability reflects a complex response to variations in the extent and intensity of the East and West African Monsoons near geographic and topographic limits within the catchment of Lake Turkana. Also, for this closed lake basin excess and deficits in water input are amplified with a cascading lake effect in the East Rift Valley and through the Chew Bahir Basin. The final regression from a high stand of > 90 m began at. 5.2 ka and water level was below 20 m by 4.5 ka; and for the remainder of the Holocene. This sustained low stand is associated with weakening of the West African Monsoon, a shift of the mean position of Congo Air Boundary west of the Lake Turkana catchment and with meter-scale variability in lake level linked to Walker circulation across the Indian Ocean. A surprising observation is

BP pledges to cut emissions

NASA Astrophysics Data System (ADS)

Showstack, Randy

British Petroleum (BP), one of the world's biggest oil companies that could become even bigger if a merger with Amoco is approved, announced on September 18 that it will cut its emissions of greenhouse gases by 10% from a 1990 baseline of 40 million tons of carbon dioxide between now and the year 2010.The target, which is double the amount of emissions reductions that industrialized nations agreed to under the Kyoto protocol on climate change, will now stand next to BP's financial targets, said John Browne, group chief executive of BP.

NASA's K/Ka-Band Broadband Aeronautical Terminal for Duplex Satellite Video Communications

NASA Technical Reports Server (NTRS)

Densmore, A.; Agan, M.

1994-01-01

JPL has recently begun the development of a Broadband Aeronautical Terminal (BAT) for duplex video satellite communications on commercial or business class aircraft. The BAT is designed for use with NASA's K/Ka-band Advanced Communications Technology Satellite (ACTS). The BAT system will provide the systems and technology groundwork for an eventual commercial K/Ka-band aeronautical satellite communication system. With industry/government partnerships, three main goals will be addressed by the BAT task: 1) develop, characterize and demonstrate the performance of an ACTS based high data rate aeronautical communications system; 2) assess the performance of current video compression algorithms in an aeronautical satellite communication link; and 3) characterize the propagation effects of the K/Ka-band channel for aeronautical communications.

European Holocene landscape change: a comparison of pollen-based approaches to reconstructing land use shifts and forest decline

NASA Astrophysics Data System (ADS)

Woodbridge, Jessie; Roberts, Neil; Fyfe, Ralph; Gaillard, Marie-José; Trondman, Anna-Kari; Davis, Basil; Kaplan, Jed

2016-04-01

Europe's primaeval forests have been progressively cleared and fragmented since the first appearance of Neolithic farming activities around 6000 years ago. Understanding spatial and temporal changes in forest cover is valuable to researchers interested in past human-environment interactions. Here we present a comparison of reconstructed Holocene forest cover across Europe from three different transformed fossil pollen-based datasets, an extensive modern surface pollen data set, and modern forest cover from remote sensing. The REVEALS approach (Trondman et al., 2015) provides a quantified and validated reconstruction of vegetation incorporating plant productivity estimates, but is currently only available for a limited number of grid cells in mid-latitude and northern Europe for a limited number of time windows. The pseudobiomization (PBM) (Fyfe et al., 2015) and plant functional type (PFT) (Davis et al., 2015) based approaches provide continuous semi-quantitative records of land use change for temperate and Northern Europe spanning the Holocene, but do not provide truly quantified vegetation reconstructions. Estimated modern forest cover based on the various approaches ranges between ~29 and 54%. However, the Holocene estimates of vegetation change show broadly similar trends, with a forest maximum from ~8.2 to ~6 ka BP, and a decline in forest cover after 6 ka BP, accelerating after ~1.2 ka BP. The reconstructions, when broadly disaggregated into northern and mid-latitude Europe, confirm that mid-latitude forest cover has declined more than that in northern Europe over the last 6 ka. The continuous record provided by the PBM has been used to establish a 'half forest loss' date for each grid cell in temperate and northern Europe, which has identified that the timing of forest loss varied spatially with certain regions remaining forested for longer. References Davis BAS, Collins PM, Kaplan JO (2015) The age and post-glacial development of the modern European

pKa Modulation in rhodamine based probes for colorimetric detection of picric acid.

PubMed

Nagarajan, V; Bag, Bamaprasad

2014-12-21

Tuning the pKa in acid sensitive rhodamine spirolactam derivatives as a function of the solvent medium resulted in the selective detection of picric acid from its lower nitro phenolic analogues and a few other carboxylic acids.

Late glacial to Holocene water level and climate changes in the Gulf of Gemlik, Sea of Marmara: evidence from multi-proxy data

NASA Astrophysics Data System (ADS)

Filikci, Betül; Eriş, Kürşad Kadir; Çağatay, Namık; Sabuncu, Asen; Polonia, Alina

2017-10-01

Multi-proxy analyses of new piston core M13-08 together with seismic data from the Gulf of Gemlik provide a detailed record of paleoceanographic and paleoclimatic changes with special emphasis on the timing of the connections between the Sea of Marmara (SoM) and the Gulf of Gemlik during the late Pleistocene to Holocene. The deposition of a subaqueous delta sourced from the Armutlu River to the north is attributed to the lowstand lake level at -60 m in the gulf prior to 13.5 cal ka BP. On the basis of the seismic data, it is argued that the higher lake level (-60 m) in the gulf compared to the SoM level (-85 m) attests to its disconnection from the SoM during the late glacial period. Ponto-Caspian assemblages in the lacustrine sedimentary unit covering the time period between 13.5 and 12 cal ka BP represent a relict that was introduced into the gulf by a Black Sea outflow during the marine isotope stage 3 interstadial. Contrary to the findings of previous studies, the data suggest that such an outflow into the Gulf of Gemlik during the late glacial period could have occurred only if the SoM lake level (-85 m) was shallower than the sill depth (-55 m) of the gulf in the west. A robust age model of the core indicates the connection of the gulf with the marine SoM at 12 cal ka BP, consistent with the sill depth (-55 m) of the gulf on the global sea level curve. Strong evidence of a marine incursion into the gulf is well documented by the μ-XRF Sr/Ca data. The available profiles of elemental ratios in core M13-08, together with the age-depth model, imply that a warm and wet climate prevailed in the gulf during the early Holocene (12-10.1 cal ka BP), whereas the longest drought occurred during the middle Holocene (8.2-5.4 cal ka BP). The base of the main Holocene sapropel in the gulf is dated at 10.1 cal ka BP, i.e., 500 years younger than its equivalent in the SoM. The late Holocene is earmarked by warm and wet climate periods (5.0-4.2 and 4.2-2.7 cal ka BP) with some

The predictive value of 53BP1 and BRCA1 mRNA expression in advanced non-small-cell lung cancer patients treated with first-line platinum-based chemotherapy

PubMed Central

Bonanno, Laura; Costa, Carlota; Majem, Margarita; Sanchez, Jose Javier; Gimenez-Capitan, Ana; Rodriguez, Ignacio; Vergenegre, Alain; Massuti, Bartomeu; Favaretto, Adolfo; Rugge, Massimo; Pallares, Cinta; Taron, Miquel; Rosell, Rafael

2013-01-01

Platinum-based chemotherapy is the standard first-line treatment for non-oncogene-addicted non-small cell lung cancers (NSCLCs) and the analysis of multiple DNA repair genes could improve current models for predicting chemosensitivity. We investigated the potential predictive role of components of the 53BP1 pathway in conjunction with BRCA1. The mRNA expression of BRCA1, MDC1, CASPASE3, UBC13, RNF8, 53BP1, PIAS4, UBC9 and MMSET was analyzed by real-time PCR in 115 advanced NSCLC patients treated with first-line platinum-based chemotherapy. Patients expressing low levels of both BRCA1 and 53BP1 obtained a median progression-free survival of 10.3 months and overall survival of 19.3 months, while among those with low BRCA1 and high 53BP1 progression-free survival was 5.9 months (P <0.0001) and overall survival was 8.2 months (P=0.001). The expression of 53BP1 refines BRCA1-based predictive modeling to identify patients most likely to benefit from platinum-based chemotherapy. PMID:24197907

RanBP2 modulates Cox11 and hexokinase I activities and haploinsufficiency of RanBP2 causes deficits in glucose metabolism.

PubMed

Aslanukov, Azamat; Bhowmick, Reshma; Guruju, Mallikarjuna; Oswald, John; Raz, Dorit; Bush, Ronald A; Sieving, Paul A; Lu, Xinrong; Bock, Cheryl B; Ferreira, Paulo A

2006-10-01

The Ran-binding protein 2 (RanBP2) is a large multimodular and pleiotropic protein. Several molecular partners with distinct functions interacting specifically with selective modules of RanBP2 have been identified. Yet, the significance of these interactions with RanBP2 and the genetic and physiological role(s) of RanBP2 in a whole-animal model remain elusive. Here, we report the identification of two novel partners of RanBP2 and a novel physiological role of RanBP2 in a mouse model. RanBP2 associates in vitro and in vivo and colocalizes with the mitochondrial metallochaperone, Cox11, and the pacemaker of glycolysis, hexokinase type I (HKI) via its leucine-rich domain. The leucine-rich domain of RanBP2 also exhibits strong chaperone activity toward intermediate and mature folding species of Cox11 supporting a chaperone role of RanBP2 in the cytosol during Cox11 biogenesis. Cox11 partially colocalizes with HKI, thus supporting additional and distinct roles in cell function. Cox11 is a strong inhibitor of HKI, and RanBP2 suppresses the inhibitory activity of Cox11 over HKI. To probe the physiological role of RanBP2 and its role in HKI function, a mouse model harboring a genetically disrupted RanBP2 locus was generated. RanBP2(-/-) are embryonically lethal, and haploinsufficiency of RanBP2 in an inbred strain causes a pronounced decrease of HKI and ATP levels selectively in the central nervous system. Inbred RanBP2(+/-) mice also exhibit deficits in growth rates and glucose catabolism without impairment of glucose uptake and gluconeogenesis. These phenotypes are accompanied by a decrease in the electrophysiological responses of photosensory and postreceptoral neurons. Hence, RanBP2 and its partners emerge as critical modulators of neuronal HKI, glucose catabolism, energy homeostasis, and targets for metabolic, aging disorders and allied neuropathies.

Paleomagnetic record for the past 80 ka from the Mahanadi basin, Bay of Bengal

NASA Astrophysics Data System (ADS)

Usapkar, A.; Dewangan, P.; Mazumdar, A.; Krishna, K. S.; Ramprasad, T.; Badesab, F. K.; Patil, M.; Gaikwad, V. V.

2018-01-01

High resolution paleomagnetic investigations were performed on a 50.08 m long sediment core (MD161/20) from Mahanadi basin, Bay of Bengal. Core yielded reliable paleomagnetic results for top 20 m below seafloor (mbsf) which spans about 80 ka. Based on the analysis of rock magnetic data, the core is subdivided into five distinct Zones: Zone 1 and Zone 2 cover top 20 mbsf and do not show any abrupt change in magnetic mineralogy, concentration and grain size. Zones 3 and 5 show significant reduction in χLF, χARM and SIRM due to dissolution of magnetic minerals. Zone 4 shows moderate values of χLF and SIRM. The low value of χARM suggests that magnetic signal is mostly carried by magnetic grains in PSD/MD state. The paleomagnetic data for the top 20 mbsf show four prominent geomagnetic excursions at ∼9 mbsf, ∼13.5 to 15 mbsf, ∼16.3 mbsf and ∼18 to 18.2 mbsf. The age-depth relationship is established using stratigraphic correlation between well-dated sedimentary core NGHP-01-19B and the core MD161/20. The ages of the observed excursions correspond to ∼18 to 20 ka, ∼42 to 49 ka, ∼54 to 57 ka and ∼69 to 70 ka. The excursions at ∼42 to 49 ka, ∼54 to 57 ka, and ∼67 to 70 ka is similar to the known excursions the Laschamp and the split Norwegian-Greenland Sea events (NGS-I and NGS-II). The excursion at 18-20 ka is not observed globally and may be related to lithological/sedimentological changes occurring during last glacial maxima (LGM). The virtual geomagnetic path (VGP) of Laschamp excursion traces clockwise loop. All excursions identified in present study fall in the periods of relatively low paleointensity.

Concentrating Solar Power Projects - KaXu Solar One | Concentrating Solar

Science.gov Websites

Power | NREL KaXu Solar One This page provides information on KaXu Solar One, a concentrating . Status Date: April 14, 2015 Project Overview Project Name: KaXu Solar One Country: South Africa Location

Space-Based Telemetry and Range Safety Project Ku-Band and Ka-Band Phased Array Antenna

NASA Technical Reports Server (NTRS)

Whiteman, Donald E.; Valencia, Lisa M.; Birr, Richard B.

2005-01-01

The National Aeronautics and Space Administration Space-Based Telemetry and Range Safety study is a multiphase project to increase data rates and flexibility and decrease costs by using space-based communications assets for telemetry during launches and landings. Phase 1 used standard S-band antennas with the Tracking and Data Relay Satellite System to obtain a baseline performance. The selection process and available resources for Phase 2 resulted in a Ku-band phased array antenna system. Several development efforts are under way for a Ka-band phased array antenna system for Phase 3. Each phase includes test flights to demonstrate performance and capabilities. Successful completion of this project will result in a set of communications requirements for the next generation of launch vehicles.

NASA SCaN Overview and Ka-Band Actvities

NASA Technical Reports Server (NTRS)

Stegeman, James D.; Midon, Marco Mario; Davarian, Faramaz; Geldzahler, Barry

2014-01-01

The Ka- and Broadband Communications Conference is an international forum attended by worldwide experts in the area of Ka-Band Propagation and satellite communications. Since its inception, NASA has taken the initiative of organizing and leading technical sections on RF Propagation and satellite communications, solidifying its worldwide leadership in the aforementioned areas. Consequently, participation in this conference through the contributions described below will maintain NASA leadership in Ka- and above RF Propagation as it relates to enhancing current and future satellite communication systems supporting space exploration.

Multi-Step Ka/Ka Dichroic Plate with Rounded Corners for NASA's 34m Beam Waveguide Antenna

NASA Technical Reports Server (NTRS)

Veruttipong, Watt; Khayatian, Behrouz; Hoppe, Daniel; Long, Ezra

2013-01-01

A multi-step Ka/Ka dichroic plate Frequency Selective Surface (FSS structure) is designed, manufactured and tested for use in NASA's Deep Space Network (DSN) 34m Beam Waveguide (BWG) antennas. The proposed design allows ease of manufacturing and ability to handle the increased transmit power (reflected off the FSS) of the DSN BWG antennas from 20kW to 100 kW. The dichroic is designed using HFSS and results agree well with measured data considering the manufacturing tolerances that could be achieved on the dichroic.

Soil geomorphology and morphometric analysis to approach denudation rates and geomorphological evolution of Limnopolar basin; Byers Plateau

NASA Astrophysics Data System (ADS)

Fernandez, Susana del Carmen; De Pablo, Miguel Angel; Otero, Xose Luis; Quesada, Antonio

2015-04-01

Limnopolar Lake is located in Byers Peninsula Plateau at 85-100m a.s.l. in maritime Antarctic environment. The peninsula, in the western end of Livingston Island, (latitude 62°34'35" S, longitude 61°13'07" W) has more favourable environmental conditions for soil development than other Antarctic regions. Finished the glacial climate conditions in the area began the weathering and edaphic processes. There are several attempts to date the Domo's Roctch cap melting in Byers peninsula based on limnological records studies giving dates of 9.5, 8.3, 6.0 and 5.0 Ka BP while was dated in 6.3 Ka BP in the basis of neotectonic approach. Nevertheless some authors have documented a period of glacial re-advance in the South Shetland Islands from around 7.0 Ka BP, persisting even until 5.0 Ka BP. During cup ice melting mainly isostatic but also tectonic (4%) uplift of the area free of ice started. Based on the date of marine terrace system (70, 55 and 24 m a.s.l.) developed in free of ice coast of the Livingstone Inland a rate of uplift of 0.4 m/Ka was stablished. General speaking that the melting of the ice cap resulted in the establishment of a lacustrine system spread all over Byers peninsula. At a first stage of evolution waters from the ice melting flooded preexisting topographic depressions lead lakes, while an incipient river networks were developing. Nevertheless, hypsometric integral of Limnopolar watershed shows the existence of at least three downcutting steps into Byers Plateau and the lake is located over the last step above the nick point of the river which is incised into glacial deposit. The base of the sedimentary record of the lake was found at 234 cm of deep and dated at about 8.3 Ka BP but corresponds to glacial sediments. In the same core sample, the change to lacustrine characteristics was found at about 211 cm and dated in 6.7 Ka BP. On the other hand, shore of the lake is excavated at 20 m from the upper part of the basin and the transversal profile of

ACTS Ka-Band Earth Stations: Technology, Performance, and Lessons Learned

NASA Technical Reports Server (NTRS)

Reinhart, Richard C.; Struharik, Steven J.; Diamond, John J.; Stewart, David

2000-01-01

The Advanced Communications Technology Satellite (ACTS) Project invested heavily in prototype Ka-band satellite ground terminals to conduct an experiments program with ACTS. The ACTS experiments program proposed to validate Ka-band satellite and ground-station technology, demonstrate future telecommunication services, demonstrate commercial viability and market acceptability of these new services, evaluate system networking and processing technology, and characterize Ka-band propagation effects, including development of techniques to mitigate signal fading. This paper will present a summary of the fixed ground terminals developed by the NASA Glenn Research Center and its industry partners, emphasizing the technology and performance of the terminals and the lessons learned throughout their 6-year operation, including the inclined orbit phase-of-operations. The fixed ground stations used for experiments by government, academic, and commercial entities used reflector-based offset-fed antenna systems with antennas ranging in size from 0.35 to 3.4 in. in diameter. Gateway earth stations included two systems referred to as the NASA Ground Station (NGS) and the Link Evaluation Terminal (LET).

Genetic variation in RPS6KA1, RPS6KA2, RPS6KB1, RPS6KB2, and PDK1 and risk of colon or rectal cancer

PubMed Central

Slattery, Martha L.; Lundgreen, Abbie; Herrick, Jennifer S.; Wolff, Roger K.

2010-01-01

RPS6KA1, RPS6KA2, RPS6KB1, RPS6KB2, and PDK1 are involved in several pathways central to the carcinogenic process, including regulation of cell growth, insulin, and inflammation. We evaluated genetic variation in their candidate genes to obtain a better understanding of their association with colon and rectal cancer. We used data from two population-based case-control studies of colon (n=1574 cases, 1940 controls) and rectal (n=791 cases, 999 controls) cancer. We observed genetic variation in RPS6KA1, RPS6KA2, and PRS6KB2 were associated with risk of developing colon cancer while only genetic variation in RPS6KA2 was associated with altering risk of rectal cancer. These genes also interacted significantly with other genes operating in similar mechanisms, including Akt1, FRAP1, NFκB1, and PIK3CA. Assessment of tumor markers indicated that these genes and this pathway may importantly contributed to CIMP+ tumors and tumors with KRAS2 mutations. Our findings implicate these candidate genes in the etiology of colon and rectal cancer and provide information on how these genes operate with other genes in the pathway. Our data further suggest that this pathway may lead to CIMP+ and KRAS2-mutated tumors. PMID:21035469

pKa values in proteins determined by electrostatics applied to molecular dynamics trajectories.

PubMed

Meyer, Tim; Knapp, Ernst-Walter

2015-06-09

For a benchmark set of 194 measured pKa values in 13 proteins, electrostatic energy computations are performed in which pKa values are computed by solving the Poisson-Boltzmann equation. In contrast to the previous approach of Karlsberg(+) (KB(+)) that essentially used protein crystal structures with variations in their side chain conformations, the present approach (KB2(+)MD) uses protein conformations from four molecular dynamics (MD) simulations of 10 ns each. These MD simulations are performed with different specific but fixed protonation patterns, selected to sample the conformational space for the different protonation patterns faithfully. The root-mean-square deviation between computed and measured pKa values (pKa RMSD) is shown to be reduced from 1.17 pH units using KB(+) to 0.96 pH units using KB2(+)MD. The pKa RMSD can be further reduced to 0.79 pH units, if each conformation is energy-minimized with a dielectric constant of εmin = 4 prior to calculating the electrostatic energy. The electrostatic energy expressions upon which the computations are based have been reformulated such that they do not involve terms that mix protein and solvent environment contributions and no thermodynamic cycle is needed. As a consequence, conformations of the titratable residues can be treated independently in the protein and solvent environments. In addition, the energy terms used here avoid the so-called intrinsic pKa and can therefore be interpreted without reference to arbitrary protonation states and conformations.

Predictions on the Development Dimensions of Provincial Tourism Discipline Based on the Artificial Neural Network BP Model

ERIC Educational Resources Information Center

Yang, Yang; Hu, Jun; Lv, Yingchun; Zhang, Mu

2013-01-01

As the tourism industry has gradually become the strategic mainstay industry of the national economy, the scope of the tourism discipline has developed rigorously. This paper makes a predictive study on the development of the scope of Guangdong provincial tourism discipline based on the artificial neural network BP model in order to find out how…

Ran-binding protein 5 (RanBP5) is related to the nuclear transport factor importin-beta but interacts differently with RanBP1.

PubMed Central

Deane, R; Schäfer, W; Zimmermann, H P; Mueller, L; Görlich, D; Prehn, S; Ponstingl, H; Bischoff, F R

1997-01-01

We report the identification and characterization of a novel 124-kDa Ran binding protein, RanBP5. This protein is related to importin-beta, the key mediator of nuclear localization signal (NLS)-dependent nuclear transport. RanBP5 was identified by two independent methods: it was isolated from HeLa cells by using its interaction with RanGTP in an overlay assay to monitor enrichment, and it was also found by the yeast two-hybrid selection method with RanBP1 as bait. RanBP5 binds to RanBP1 as part of a trimeric RanBP1-Ran-RanBP5 complex. Like importin-beta, RanBP5 strongly binds the GTP-bound form of Ran, stabilizing it against both intrinsic and RanGAP1-induced GTP hydrolysis and also against nucleotide exchange. The GAP resistance of the RanBP5-RanGTP complex can be relieved by RanBP1, which might reflect an in vivo role for RanBP1. RanBP5 is a predominantly cytoplasmic protein that can bind to nuclear pore complexes. We propose that RanBP5 is a mediator of a nucleocytoplasmic transport pathway that is distinct from the importin-alpha-dependent import of proteins with a classical NLS. PMID:9271386

An optimized BP neural network based on genetic algorithm for static decoupling of a six-axis force/torque sensor

NASA Astrophysics Data System (ADS)

Fu, Liyue; Song, Aiguo

2018-02-01

In order to improve the measurement precision of 6-axis force/torque sensor for robot, BP decoupling algorithm optimized by GA (GA-BP algorithm) is proposed in this paper. The weights and thresholds of a BP neural network with 6-10-6 topology are optimized by GA to develop decouple a six-axis force/torque sensor. By comparison with other traditional decoupling algorithm, calculating the pseudo-inverse matrix of calibration and classical BP algorithm, the decoupling results validate the good decoupling performance of GA-BP algorithm and the coupling errors are reduced.

Spread prediction model of continuous steel tube based on BP neural network

NASA Astrophysics Data System (ADS)

Zhai, Jian-wei; Yu, Hui; Zou, Hai-bei; Wang, San-zhong; Liu, Li-gang

2017-07-01

According to the geometric pass of roll and technological parameters of three-roller continuous mandrel rolling mill in a factory, a finite element model is established to simulate the continuous rolling process of seamless steel tube, and the reliability of finite element model is verified by comparing with the simulation results and actual results of rolling force, wall thickness and outer diameter of the tube. The effect of roller reduction, roller rotation speed and blooming temperature on the spread rule is studied. Based on BP(Back Propagation) neural network technology, a spread prediction model of continuous rolling tube is established for training wall thickness coefficient and spread coefficient of the continuous rolling tube, and the rapid and accurate prediction of continuous rolling tube size is realized.

Tunneling in BP-MoS2 heterostructure

NASA Astrophysics Data System (ADS)

Liu, Xiaochi; Qu, Deshun; Kim, Changsik; Ahmed, Faisal; Yoo, Won Jong

Tunnel field effect transistor (TFET) is considered to be a leading option for achieving SS <60 mV/dec. In this work, black phosphorus (BP) and molybdenum disulfide (MoS2) heterojunction devices are fabricated. We find that thin BP flake and MoS2 form normal p-n junctions, tunneling phenomena can be observed when BP thickness increases to certain level. PEO:CsClO4 is applied on the surface of the device together with a side gate electrode patterned together with source and drain electrodes. The Fermi level of MoS2 on top of BP layer can be modulated by the side gating, and this enables to vary the MoS2-BP tunnel diode property from off-state to on-state. Since tunneling is the working mechanism of MoS2-BP junction, and PEO:CsClO4\\ possesses ultra high dielectric constant and small equivalent oxide thickness (EOT), a low SS of 55 mV/dec is obtained from MoS2-BP TFET. This work was supported by the Global Research Laboratory and Global Frontier R&D Programs at the Center for Hybrid Interface Materials, both funded by the Ministry of Science, ICT & Future Planning via the National Research Foundation of Korea (NRF).

Holocene fire activity and vegetation response in South-Eastern Iberia

NASA Astrophysics Data System (ADS)

Gil-Romera, Graciela; Carrión, José S.; Pausas, Juli G.; Sevilla-Callejo, Miguel; Lamb, Henry F.; Fernández, Santiago; Burjachs, Francesc

2010-05-01

Since fire has been recognized as an essential disturbance in Mediterranean landscapes, the study of long-term fire ecology has developed rapidly. We have reconstructed a sequence of vegetation dynamics and fire changes across south-eastern Iberia by coupling records of climate, fire, vegetation and human activities. We calculated fire activity anomalies (FAAs) in relation to 3 ka cal BP for 10-8 ka cal BP, 6 ka cal BP, 4 ka cal BP and the present. For most of the Early to the Mid-Holocene uneven, but low fire events were the main vegetation driver at high altitudes where broadleaved and coniferous trees presented a highly dynamic post-fire response. At mid-altitudes in the mainland Segura Mountains, fire activity remained relatively stable, at similar levels to recent times. We hypothesize that coastal areas, both mountains and lowlands, were more fire-prone landscapes as biomass was more likely to have accumulated than in the inland regions, triggering regular fire events. The wet and warm phase towards the Mid-Holocene (between ca 8 and 6 ka cal BP) affected the whole region and promoted the spread of mesophytic forest co-existing with Pinus, as FAAs appear strongly negative at 6 ka cal BP, with a less important role of fire. Mid and Late Holocene landscapes were shaped by an increasing aridity trend and the rise of human occupation, especially in the coastal mountains where forest disappeared from ca 2 ka cal BP. Mediterranean-type vegetation (evergreen oaks and Pinus pinaster- halepensis types) showed the fastest post-fire vegetation dynamics over time.

Mars Global Surveyor Ka-Band Frequency Data Analysis

NASA Astrophysics Data System (ADS)

Morabito, D.; Butman, S.; Shambayati, S.

2000-01-01

The Mars Global Surveyor (MGS) spacecraft, launched on November 7, 1996, carries an experimental space-to-ground telecommunications link at Ka-band (32 GHz) along with the primary X-band (8.4 GHz) downlink. The signals are simultaneously transmitted from a 1.5-in diameter parabolic high gain antenna (HGA) on MGS and received by a beam-waveguide (BWG) R&D 34-meter antenna located in NASA's Goldstone Deep Space Network (DSN) complex near Barstow, California. The projected 5-dB link advantage of Ka-band relative to X-band was confirmed in previous reports using measurements of MGS signal strength data acquired during the first two years of the link experiment from December 1996 to December 1998. Analysis of X-band and Ka-band frequency data and difference frequency (fx-fka)/3.8 data will be presented here. On board the spacecraft, a low-power sample of the X-band downlink from the transponder is upconverted to 32 GHz, the Ka-band frequency, amplified to I-W using a Solid State Power Amplifier, and radiated from the dual X/Ka HGA. The X-band signal is amplified by one of two 25 W TWTAs. An upconverter first downconverts the 8.42 GHz X-band signal to 8 GHz and then multiplies using a X4 multiplier producing the 32 GHz Ka-band frequency. The frequency source selection is performed by an RF switch which can be commanded to select a VCO (Voltage Controlled Oscillator) or USO (Ultra-Stable Oscillator) reference. The Ka-band frequency can be either coherent with the X-band downlink reference or a hybrid combination of the USO and VCO derived frequencies. The data in this study were chosen such that the Ka-band signal is purely coherent with the X-band signal, that is the downconverter is driven by the same frequency source as the X-band downlink). The ground station used to acquire the data is DSS-13, a 34-meter BWG antenna which incorporates a series of mirrors inside beam waveguide tubes which guide the energy to a subterranean pedestal room, providing a stable environment

Ku/Ka band observations over polar ice sheets

NASA Astrophysics Data System (ADS)

Thibaut, Pierre; Lasne, Yannick; Guillot, Amandine; Picot, Nicolas; Rémy, Frédérique

2015-04-01

For the first time, comparisons between Ku and Ka altimeter measurements are possible thanks to the new AltiKa instrument embarked onboard the Saral mission launched on February 25, 2013. This comparison is of particular interest when dealing with ice sheet observations because both frequencies have different penetration characteristics. We propose in this paper to revisit the estimation of the ice sheet topography (and other related parameters) with altimeter systems and to present illustrations of the differences observed in Ku and Ka bands using AltiKa, Envisat/RA-2 but also Cryosat-2 measurements. Working on AltiKa waveforms in the frame of the PEACHI project has allowed us to better understand the impact of the penetration depth on the echo shape, to improve the estimation algorithm and to compare its output with historical results obtained on Envisat and ERS missions. In particular, analyses at cross-overs of the Cryosat-2 and Saral data will be presented. Sentinel-3 mission should be launch during 2015. Operating in Ku band and in delay/doppler mode, it will be crucial to account for penetration effects in order to accurately derive the ice sheet heights and trends. The results of the work presented here, will benefit to the Sentinel-3 mission.

Progress in the prediction of pKa values in proteins

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alexov, Emil; Mehler, Ernest L.; Baker, Nathan A.

2011-12-15

The pKa-cooperative aims to provide a forum for experimental and theoretical researchers interested in protein pKa values and protein electrostatics in general. The first round of the pKa -cooperative, which challenged computational labs to carry out blind predictions against pKas experimentally determined in the laboratory of Bertrand Garcia-Moreno, was completed and results discussed at the Telluride meeting (July 6-10, 2009). This paper serves as an introduction to the reports submitted by the blind prediction participants that will be published in a special issue of PROTEINS: Structure, Function and Bioinformatics. Here we briefly outline existing approaches for pKa calculations, emphasizing methodsmore » that were used by the participants in calculating the blind pKa values in the first round of the cooperative. We then point out some of the difficulties encountered by the participating groups in making their blind predictions, and finally try to provide some insights for future developments aimed at improving the accuracy of pKa calculations.« less

BP180 Is Critical in the Autoimmunity of Bullous Pemphigoid

PubMed Central

Liu, Yale; Li, Liang; Xia, Yumin

2017-01-01

Bullous pemphigoid (BP) is by far the most common autoimmune blistering dermatosis that mainly occurs in the elderly. The BP180 is a transmembrane glycoprotein, which is highly immunodominant in BP. The structure and location of BP180 indicate that it is a significant autoantigen and plays a key role in blister formation. Autoantibodies from BP patients react with BP180, which leads to its degradation and this has been regarded as the central event in BP pathogenesis. The consequent blister formation involves the activation of complement-dependent or -independent signals, as well as inflammatory pathways induced by BP180/anti-BP180 autoantibody interaction. As a multi-epitope molecule, BP180 can cause dermal–epidermal separation via combining each epitope with specific immunoglobulin, which also facilitates blister formation. In addition, some inflammatory factors can directly deplete BP180, thereby leading to fragility of the dermal–epidermal junction and blister formation. This review summarizes recent investigations on the role of BP180 in BP pathogenesis to determine the potential targets for the treatment of patients with BP. PMID:29276517

Multiple Nonconformities in Ice-Walled Lake Successions Indicate Periods with Cold Summers (24.4 - 22.5 ka, 21.1 - 19.2 ka, 18.5 - 18.1 ka) during the Last Deglaciation in Northeastern Illinois, USA

NASA Astrophysics Data System (ADS)

Curry, B. B.

2014-12-01

Unprecedented age control on many last glacial stratigraphic units and morainal ice-margin positions are interpreted from AMS radiocarbon ages of tundra plant macrofossils archived in low-relief ice-walled lake plain (IWLP) deposits the Lake Michigan Lobe (south-central Laurentide Ice Sheet). IWLPs are periglacial features that formed on morainal dead-ice permafrost. Lacustrine sediment, and the fossils contained therein, had physical and temporal proximity to the glacier which formed the underlying moraine. In modern ice-walled lakes, as the lake's ice cover begins to melt, moats form which allows access of sloughing tundra-mantled active layer sediment (soil) into the lakes. Multiple AMS ages from two sites with proglacial sediment buried by glacial max LIS diamicton, and IWLPs reveal evidence of episodic plant growth and sedimentation including ca. 24.0 to 24.4 ka (post Shelby Phase), 22.5 to 21.1 ka (post Livingston Phase), 18.1 to 17.4 ka (post Woodstock Phase). Although presently based on negative evidence, the associated nonconformities (listed in title) indicate periods when cold conditions did not promote development of the estival moat. Although the evidence does not preclude tundra growth during the cold summers, there was little landscape modification due to limited thawing of the active layer. At approximately the onset of the 19.2-18.5 "warm" period, at least two large deglacial discharge events flooded the Fox and Kankakee tributary valleys of the Illinois River. The latter, known as the Kankakee Torrent, occurred at 19.05 - 18.85 ka (σ1 range) at the Oswego channel complex. The temporal coincidence of the torrents and sedimentation in ice-walled lakes suggests that the post-Livingston Phase nonconformity (21.1 - 19.2 ka) was a period of lessened meltwater discharge through subglacial conduits (tunnel valleys) as the frozen toe promoted formation of subglacial lakes, buildup of pore-water pressures, and the release of subglacial water as "torrents

Stratigraphy and Melt Compositions of the 3.6 and 6.7 ka Plinian Eruptions of Hudson Volcano, Chile.

NASA Astrophysics Data System (ADS)

Carey, S.; Scasso, R.; Kratzmann, D.; Naranjo, J.; Bande, A.

2005-12-01

Fallout deposits from two major Holocene eruptions of Hudson Volcano in southern Chile (3.6 ka and 6.7 ka BP, Naranjo and Stern, 1998) provide new evidence for multiple phases, including subplinian to plinian discharges and episodes of phreatomagmatic activity. Four phases have been identified for the 3.6 ka eruption. The melt was trachydacitic and did not exhibit any significant variation throughout the fall sequence. Phase one (P1) produced a commonly reverse graded, lapilli fall deposit. Phase two (P2) also produced a reverse graded, coarse lapilli fall layer. Phase three (P3) deposited a massive, poorly-sorted, silty-ash layer with pumice and minor accretionary lapilli. The final phase of the eruption (P4) laid down a commonly normal graded, coarse lapilli fall deposit. Phases P1, P2 and P4 represent fallout from high altitude plumes with minor intensity fluctuations, whereas P3 resulted from magma/water interactions and a lower eruption column. Isopach maps show a shift in the main dispersal axis for the 3.6 ka phreatomagmatic ashfall (P3), relative to the lapilli deposits. Phases 1, 2 and 4 trend generally to the east, whereas the axis for the P3 fallout trends northeast. This is likely caused by dispersal of material at different altitudes during the eruption and not a general change in the predominant wind direction. Three major phases (P1 to P3) were identified for the 6.7 ka eruption. The initial phase (P1) produced a commonly reverse graded, coarse lapilli fall deposit. The second phase (P2) produced a thick, distinctive accretionary lapilli-rich, silty-ash layer with accretionary lapilli diameters up to 2.3 cm at 35 kms from the volcano. The final phase (P3) laid down an often normal graded, coarse lapilli fall unit. The melt phase was also trachydacitic in composition and relatively uniform during the eruption, but less evolved than the magma erupted during the 3.6 ka event. The accretionary lapilli layer (P2) has been correlated with a widespread

The Potential for a Ka-band (32 GHz) Worldwide VLBI Network

NASA Astrophysics Data System (ADS)

Jacobs, C. S.; Bach, U.; Colomer, F.; Garcá-Miró, C.; Gómez-González, J.; Gulyaev, S.; Horiuchi, S.; Ichikawa, R.; Kraus, A.; Kronschnabl, G.; López-Fernández, J. A.; Lovell, J.; Majid, W.; T; Natusch; Neidhardt, A.; Phillips, C.; Porcas, R.; Romero-Wolf, A.; Saldana, L.; Schreiber, U.; Sotuela, I.; Takeuchi, H.; Trinh, J.; Tzioumis, A.; de Vincente, P.; Zharov, V.

2012-12-01

Ka-band (32 GHz, 9 mm) Very Long Baseline Interferometric (VLBI) networking has now begun and has tremendous potential for expansion over the next few years. Ka-band VLBI astrometry from NASA's Deep Space Network has already developed a catalog of 470 observable sources with highly accurate positions. Now, several antennas worldwide are planning or are considering adding Ka-band VLBI capability. Thus, there is now an opportunity to create a worldwide Ka-band network with potential for high resolution imaging and astrometry. With baselines approaching a Giga-lambda, a Ka-band network would be able to probe source structure at the nano-radian (200 as) level (100X better than Hubble) and thus gain insight into the astrophysics of the most compact regions of emission in active galactic nuclei. We discuss the advantages of Ka-band, show the known sources and candidates, simulate projected baseline (uv) coverage, and discuss potential radio frequency feeds. The combination of these elements demonstrates the feasibility of a worldwide Ka network within the next few years.

The Potential for a Ka-band (32 GHz) Worldwide VLBI Network

NASA Technical Reports Server (NTRS)

Jacobs, C. S.; Bach, U.; Colomer, F.; Garcia-Miro, C.; Gomez-Gonzalez, J.; Gulyaev, S.; Horiuchi, S.; Ichikawa, R.; Kraus, A.; Kronschnabl, G.;

Bipolar volcanic events in ice cores and the Toba eruption at 74 ka BP (Invited)

NASA Astrophysics Data System (ADS)

Svensson, A.

2013-12-01

Acidity spikes in Greenland and Antarctic ice cores are applied as tracers of past volcanic activity. Besides providing information on the timing and magnitude of past eruptions, the acidity spikes are also widely used for synchronization of ice cores. All of the deep Greenland ice cores are thus synchronized throughout the last glacial cycle based on volcanic markers. Volcanic matching of ice cores from the two Hemispheres is much more challenging but it is feasible in periods of favourable conditions. Over the last two millennia, where ice cores are precisely dated, some 50 bipolar volcanic events have thus been identified. In order for an eruption to express a bipolar fingerprint it generally needs to be a low latitude eruption with stratospheric injection. Sometimes tephra is associated with the ice-core acidity spikes, but most often there is no tephra present in the ice. As yet, an unknown eruption occurring in 1259 AD is the only event reported to have deposited tephra in both Greenland and Antarctica. During the last glacial period bipolar volcanic matching is very challenging and very little work has been done, but recent high-resolution ice core records have the potential to provide bipolar ice core matching for some periods. Recently, Greenland and Antarctic ice cores have been linked by acidity spikes in the time window of the most recent eruption (the YTT eruption) of the Indonesian Toba volcano that is situated close to equator in Sumatra. Ash from this Toba event is widespread over large areas in Asia and has been identified as far west as Africa, but no corresponding tephra has been found in polar ice cores despite several attempts. The age of the YTT eruption is well constrained by recent Ar-Ar dating to have occurred some 74 ka ago close to the Marine Isotope Stage 4/5 boundary and close to the onset of the cold Greenland Stadial 20 and the corresponding mild Antarctic Isotopic Maxima 19 and 20. Surprisingly, no single outstanding acidity spike

Ku- and Ka-Band Phased Array Antenna for the Space-Based Telemetry and Range Safety Project

NASA Technical Reports Server (NTRS)

Whiteman, Donald E.; Valencia, Lisa M.; Birr, Richard B.

2005-01-01

The National Aeronautics and Space Administration Space-Based Telemetry and Range Safety study is a multiphase project to increase data rates and flexibility and decrease costs by using space-based communications assets for telemetry during launches and landings. Phase 1 used standard S-band antennas with the Tracking and Data Relay Satellite System to obtain a baseline performance. The selection process and available resources for Phase 2 resulted in a Ku-band phased array antenna system. Several development efforts are under way for a Ka-band phased array antenna system for Phase 3. Each phase includes test flights to demonstrate performance and capabilities. Successful completion of this project will result in a set of communications requirements for the next generation of launch vehicles.

BP180 dysfunction triggers spontaneous skin inflammation in mice.

PubMed

Zhang, Yang; Hwang, Bin-Jin; Liu, Zhen; Li, Ning; Lough, Kendall; Williams, Scott E; Chen, Jinbo; Burette, Susan W; Diaz, Luis A; Su, Maureen A; Xiao, Shengxiang; Liu, Zhi

2018-06-04

BP180, also known as collagen XVII, is a hemidesmosomal component and plays a key role in maintaining skin dermal/epidermal adhesion. Dysfunction of BP180, either through genetic mutations in junctional epidermolysis bullosa (JEB) or autoantibody insult in bullous pemphigoid (BP), leads to subepidermal blistering accompanied by skin inflammation. However, whether BP180 is involved in skin inflammation remains unknown. To address this question, we generated a BP180-dysfunctional mouse strain and found that mice lacking functional BP180 (termed Δ NC16A ) developed spontaneous skin inflammatory disease, characterized by severe itch, defective skin barrier, infiltrating immune cells, elevated serum IgE levels, and increased expression of thymic stromal lymphopoietin (TSLP). Severe itch is independent of adaptive immunity and histamine, but dependent on increased expression of TSLP by keratinocytes. In addition, a high TSLP expression is detected in BP patients. Our data provide direct evidence showing that BP180 regulates skin inflammation independently of adaptive immunity, and BP180 dysfunction leads to a TSLP-mediated itch. The newly developed mouse strain could be a model for elucidation of disease mechanisms and development of novel therapeutic strategies for skin inflammation and BP180-related skin conditions.

Removal of 2-ClBP from soil-water system using activated carbon supported nanoscale zerovalent iron.

PubMed

Zhang, Wei; Yu, Tian; Han, Xiaolin; Ying, Weichi

2016-09-01

We explored the feasibility and removal mechanism of removing 2-chlorobiphenyl (2-ClBP) from soil-water system using granular activated carbon (GAC) impregnated with nanoscale zerovalent iron (reactive activated carbon or RAC). The RAC samples were successfully synthesized by the liquid precipitation method. The mesoporous GAC based RAC with low iron content (1.32%) exhibited higher 2-ClBP removal efficiency (54.6%) in the water phase. The result of Langmuir-Hinshelwood kinetic model implied that the different molecular structures between 2-ClBP and trichloroethylene (TCE) resulted in more difference in dechlorination reaction rates on RAC than adsorption capacities. Compared to removing 2-ClBP in the water phase, RAC removed the 2-ClBP more slowly in the soil phase due to the significant external mass transfer resistance. However, in the soil phase, a better removal capacity of RAC was observed than its base GAC because the chemical dechlorination played a more important role in total removal process for 2-ClBP. This important result verified the effectiveness of RAC for removing 2-ClBP in the soil phase. Although reducing the total RAC removal rate of 2-ClBP, soil organic matter (SOM), especially the soft carbon, also served as an electron transfer medium to promote the dechlorination of 2-ClBP in the long term. Copyright © 2016. Published by Elsevier B.V.

Relative paleointensity (RPI) in the latest Pleistocene (10-45 ka) and implications for the "mystery interval" in atmospheric radiocarbon production at 17 ka.

NASA Astrophysics Data System (ADS)

Channell, J. E. T.; Hodell, D. A.

2017-12-01

Relative paleointensity (RPI) proxies have been used to improve the resolution of Quaternary stratigraphies, and have been matched to oxygen isotope stratigraphies over the last 2 Myrs. The archeomagnetic archive has been important for the Holocene RPI record, and the older Quaternary record has come largely from ODP/IODP and MD (Marion Dufresne - Calypso) marine cores. Beyond the range of archeomagnetic data, published RPI stacks have poor consistency in the 10-30 ka (latest Pleistocene) interval, possibly due to poor quality of ODP/IODP and MD cores in the upper few meters of the sedimentary sections. We report RPI data from a suite of conventional piston cores and Kasten cores from the SW Iberian margin collected during cruise JC089 of the RSS James Cook in August 2013. The age models were acquired by correlation of Ca/Ti XRF core-scanning data to L* reflectance from the Cariaco Basin that is tied to the Greenland ice-core chronology. Mean sedimentation rates are in the 10-20 cm/kyr range. The Holocene RPI record from these marine cores can be broadly correlated to the archeomagnetic RPI compilations. The preceding RPI data are characterized by a short-lived minimum at 13-15 ka, a high in RPI at 17-20 ka, preceded by a discontinuous RPI decrease to 40 ka at the time of the well-documented Laschamp geomagnetic excursion. A stack of 12 RPI records from the SW Iberian margin for the 0-45 ka interval are compared with 11 records from elsewhere, including marine and lake records from the Pacific and South Atlantic realms, chosen on the basis of mean sedimentation rates (>20 cm/kyr) and superior age models. The resulting stacks are very different to previously published RPI stacks, particularly for the 10-30 ka interval, and imply a global (dipole-field) high at 17-20 ka that has implications for the 190 ‰ drop in atmospheric 14C during the so-called "mystery interval" (17.5-14.5 ka).

bpRNA: large-scale automated annotation and analysis of RNA secondary structure.

PubMed

Danaee, Padideh; Rouches, Mason; Wiley, Michelle; Deng, Dezhong; Huang, Liang; Hendrix, David

2018-05-09

While RNA secondary structure prediction from sequence data has made remarkable progress, there is a need for improved strategies for annotating the features of RNA secondary structures. Here, we present bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpretable description of all loops, stems, and pseudoknots, along with the positions, sequence, and flanking base pairs of each such structural feature. We also introduce several new informative representations of RNA structure types to improve structure visualization and interpretation. We have further used bpRNA to generate a web-accessible meta-database, 'bpRNA-1m', of over 100 000 single-molecule, known secondary structures; this is both more fully and accurately annotated and over 20-times larger than existing databases. We use a subset of the database with highly similar (≥90% identical) sequences filtered out to report on statistical trends in sequence, flanking base pairs, and length. Both the bpRNA method and the bpRNA-1m database will be valuable resources both for specific analysis of individual RNA molecules and large-scale analyses such as are useful for updating RNA energy parameters for computational thermodynamic predictions, improving machine learning models for structure prediction, and for benchmarking structure-prediction algorithms.

BP Reg Experiment Operations

NASA Image and Video Library

2015-04-07

ISS043E091755 (04/07/2015) --- Expedition 43 Commander Terry Virts is seen here working inside of the Columbus laboratory on the Blood Pressure Regulation (BP Reg) experiment. Astronauts returning from long-duration space flights risk experiencing dizziness or fainting when they stand immediately after returning to Earth. This has an important health risk as it reduces the potential for astronauts to safely escape from an emergency situation. BP Reg will help researchers develop appropriate countermeasures so that astronauts returning from long-duration space flights will have very low risk of experiencing dizziness or fainting when they return to Earth.

BP Reg Experiment Operations

NASA Image and Video Library

2015-04-07

ISS043E091740 (04/07/2015) --- Expedition 43 Commander Terry Virts is seen here working inside of the Columbus laboratory on the Blood Pressure Regulation (BP Reg) experiment. Astronauts returning from long-duration space flights risk experiencing dizziness or fainting when they stand immediately after returning to Earth. This has an important health risk as it reduces the potential for astronauts to safely escape from an emergency situation. BP Reg will help researchers develop appropriate countermeasures so that astronauts returning from long-duration space flights will have very low risk of experiencing dizziness or fainting when they return to Earth.

Mutation particle swarm optimization of the BP-PID controller for piezoelectric ceramics

NASA Astrophysics Data System (ADS)

Zheng, Huaqing; Jiang, Minlan

2016-01-01

PID control is the most common used method in industrial control because its structure is simple and it is easy to implement. PID controller has good control effect, now it has been widely used. However, PID method has a few limitations. The overshoot of the PID controller is very big. The adjustment time is long. When the parameters of controlled plant are changing over time, the parameters of controller could hardly change automatically to adjust to changing environment. Thus, it can't meet the demand of control quality in the process of controlling piezoelectric ceramic. In order to effectively control the piezoelectric ceramic and improve the control accuracy, this paper replaced the learning algorithm of the BP with the mutation particle swarm optimization algorithm(MPSO) on the process of the parameters setting of BP-PID. That designed a better self-adaptive controller which is combing the BP neural network based on mutation particle swarm optimization with the conventional PID control theory. This combination is called the MPSO-BP-PID. In the mechanism of the MPSO, the mutation operation is carried out with the fitness variance and the global best fitness value as the standard. That can overcome the precocious of the PSO and strengthen its global search ability. As a result, the MPSO-BP-PID can complete controlling the controlled plant with higher speed and accuracy. Therefore, the MPSO-BP-PID is applied to the piezoelectric ceramic. It can effectively overcome the hysteresis, nonlinearity of the piezoelectric ceramic. In the experiment, compared with BP-PID and PSO-BP-PID, it proved that MPSO is effective and the MPSO-BP-PID has stronger adaptability and robustness.

Late Pleistocene - Holocene surface processes and landscape evolution in the central Swiss Alps

NASA Astrophysics Data System (ADS)

Boxleitner, Max; Musso, Alessandra; Waroszewski, Jarosław; Malkiewicz, Małgorzata; Maisch, Max; Dahms, Dennis; Brandová, Dagmar; Christl, Marcus; de Castro Portes, Raquel; Egli, Markus

2017-10-01

The European Alps are a geomorphologically active region and experience a number of gravity-driven hillslope processes. Soil and landscape formation in the Alps has consequently undergone several minor and major traceable changes of developmental trajectories during the Holocene. Soil development is hypothesised to be often non-linear with time and characterised by stages of progressive and regressive evolution caused by upbuilding (formation, profile deepening) and erosion (profile shallowing). Several cold and warm climate phases are identified during the Holocene but it is largely unknown which effects these might have had on slope processes. By using datable moraines (10Be) and mires (14C), we have constructed a temporal framework for these processes. Using the geochemical imprint of mires in the Alpine setting of the Göschener-valley of the Central Swiss Alps, we reconstructed general (mostly erosional) landscape processes for the last ca. 10 ka. As this is the type locality for the Göschener cold phase, we assumed that this phase (Göschener cold phase I and II 1.5 and 2.5 ka BP) should have left easily recognizable traits. After deglaciation (11-12 ka BP), soil evolution was progressive. Beginning around 8 ka BP, we detect a distinct increase in erosion here, together with a vegetation change (towards tundra vegetation) and the highest measured rates of carbon sequestration. Other phases of high geomorphic activity were recognised ca. 5-6 ka BP, 4 ka BP and, to a lesser extent, 1-3 ka ago. The cold phase at 5-6 ka BP corresponds to a less distinct change in vegetation and lessened erosion. Human impact is increasingly obvious since about 2.4 ka BP which overlaps with the Göschener cold phase. Nonetheless, erosion processes were not extraordinarily high during this period and a climate effect cannot be distinguished. We detect evidence of increasing human disturbance (regressive soil evolution) for about the last 1 ka. We also detect an increase in dust

Prediction of BP reactivity to talking using hybrid soft computing approaches.

PubMed

Kaur, Gurmanik; Arora, Ajat Shatru; Jain, Vijender Kumar

2014-01-01

High blood pressure (BP) is associated with an increased risk of cardiovascular diseases. Therefore, optimal precision in measurement of BP is appropriate in clinical and research studies. In this work, anthropometric characteristics including age, height, weight, body mass index (BMI), and arm circumference (AC) were used as independent predictor variables for the prediction of BP reactivity to talking. Principal component analysis (PCA) was fused with artificial neural network (ANN), adaptive neurofuzzy inference system (ANFIS), and least square-support vector machine (LS-SVM) model to remove the multicollinearity effect among anthropometric predictor variables. The statistical tests in terms of coefficient of determination (R (2)), root mean square error (RMSE), and mean absolute percentage error (MAPE) revealed that PCA based LS-SVM (PCA-LS-SVM) model produced a more efficient prediction of BP reactivity as compared to other models. This assessment presents the importance and advantages posed by PCA fused prediction models for prediction of biological variables.

Inferring LGM sedimentary and climatic changes in the southern Eastern Alps foreland through the analysis of a 14C ages database (Brenta megafan, Italy)

NASA Astrophysics Data System (ADS)

Rossato, Sandro; Mozzi, Paolo

2016-09-01

The analysis of a database of radiocarbon ages is proposed as a tool for investigating major glaciofluvial systems of the Last Glacial Maximum (LGM) in the Alpine foreland, and their relations with glacier dynamics and climatic fluctuations. Our research concerns the Brenta megafan (NE Italy), where 110 radiocarbon dates integrate a robust regional stratigraphic and palaeoclimatic framework. Age-depth models allowed us to calculate sedimentation rates, while the time distribution of peat layers, which recurrently formed in this region during the LGM, were estimated through meta-analysis. The reliability of statistical results was carefully evaluated using Pearson and Spearman coefficients. Sedimentation rates in the Brenta megafan markedly fluctuated during LGM: ≈1.8 m/ka between 40 and 26.7 ka cal BP; ≈3 m/ka between 26.7 and 23.8 ka cal BP and ≈1.4 m/ka from 23.8 to 17.5 ka cal BP, when the distributary system deactivated due to fan-head trenching. This is evidence that sediment input and routing in the glaciofluvial distributary system was particularly efficient during the central part of LGM, when glaciers were stable at their outermost position. Meta-analysis indicates an increase in peat formation in correspondence with global (Heinrich Event 3 and/or the Greenland Interstadial 5.1 and 4 for the 30.5, 29.6 and 28.8 ka cal BP peaks) and regional (23.5 ka cal BP) wet events. Other peaks at 22.2, 21.8, 20.2 and 19 ka cal BP correlate with fluctuations of south-eastern Alpine glaciers. Significant peat formation continued until ≈18 ka cal BP, when the last peak occurred. A marked decrease in peat formation is recorded concomitantly with the onset of Heinrich Event 2 (i.e. the 26 ka cal BP trough). The good correspondence of sedimentary events in the Brenta glaciofluvial system with the dynamics of glaciers and glaciofluvial and lacustrine systems in the southern Eastern Alps suggests a common climatic forcing on the whole region during the LGM. Peat layer

Non-invasive continuous blood pressure measurement based on mean impact value method, BP neural network, and genetic algorithm.

PubMed

Tan, Xia; Ji, Zhong; Zhang, Yadan

2018-04-25

Non-invasive continuous blood pressure monitoring can provide an important reference and guidance for doctors wishing to analyze the physiological and pathological status of patients and to prevent and diagnose cardiovascular diseases in the clinical setting. Therefore, it is very important to explore a more accurate method of non-invasive continuous blood pressure measurement. To address the shortcomings of existing blood pressure measurement models based on pulse wave transit time or pulse wave parameters, a new method of non-invasive continuous blood pressure measurement - the GA-MIV-BP neural network model - is presented. The mean impact value (MIV) method is used to select the factors that greatly influence blood pressure from the extracted pulse wave transit time and pulse wave parameters. These factors are used as inputs, and the actual blood pressure values as outputs, to train the BP neural network model. The individual parameters are then optimized using a genetic algorithm (GA) to establish the GA-MIV-BP neural network model. Bland-Altman consistency analysis indicated that the measured and predicted blood pressure values were consistent and interchangeable. Therefore, this algorithm is of great significance to promote the clinical application of a non-invasive continuous blood pressure monitoring method.

BP-Dock: A Flexible Docking Scheme for Exploring Protein–Ligand Interactions Based on Unbound Structures

PubMed Central

Bolia, Ashini; Gerek, Z. Nevin; Ozkan, S. Banu

2016-01-01

Molecular docking serves as an important tool in modeling protein–ligand interactions. However, it is still challenging to incorporate overall receptor flexibility, especially backbone flexibility, in docking due to the large conformational space that needs to be sampled. To overcome this problem, we developed a novel flexible docking approach, BP-Dock (Backbone Perturbation-Dock) that can integrate both backbone and side chain conformational changes induced by ligand binding through a multi-scale approach. In the BP-Dock method, we mimic the nature of binding-induced events as a first-order approximation by perturbing the residues along the protein chain with a small Brownian kick one at a time. The response fluctuation profile of the chain upon these perturbations is computed using the perturbation response scanning method. These response fluctuation profiles are then used to generate binding-induced multiple receptor conformations for ensemble docking. To evaluate the performance of BP-Dock, we applied our approach on a large and diverse data set using unbound structures as receptors. We also compared the BP-Dock results with bound and unbound docking, where overall receptor flexibility was not taken into account. Our results highlight the importance of modeling backbone flexibility in docking for recapitulating the experimental binding affinities, especially when an unbound structure is used. With BP-Dock, we can generate a wide range of binding site conformations realized in nature even in the absence of a ligand that can help us to improve the accuracy of unbound docking. We expect that our fast and efficient flexible docking approach may further aid in our understanding of protein–ligand interactions as well as virtual screening of novel targets for rational drug design. PMID:24380381

Ka-band monopulse antenna-pointing systems analysis and simulation

NASA Technical Reports Server (NTRS)

Lo, V. Y.

1996-01-01

NASA 's Deep Space Network (DSN) has been using both 70-m and 34-m reflector antennas to communicate with spacecraft at S-band (2.3 GHz) and X-band (8.45 GHz). To improve the quality of telecommunication and to meet future mission requirements, JPL has been developing 34-m Ka-band (32-GHz) beam waveguide antennas. Presently, antenna pointing operates in either the open-loop mode with blind pointing using navigation predicts or the closed-loop mode with conical scan (conscan). Pointing accuracy under normal conscan operating conditions is in the neighborhood of 5 mdeg. This is acceptable at S- and X-bands, but not enough at Ka-band. Due to the narrow beamwidth at Ka-band, it is important to improve pointing accuracy significantly (approximately 2 mdeg). Monopulse antenna tracking is one scheme being developed to meet the stringent pointing-accuracy requirement at Ka-band. Other advantages of monopulse tracking include low sensitivity to signal amplitude fluctuations as well as single-pulse processing for acquisition and tracking. This article presents system modeling, signal processing, simulation, and implementation of Ka-band monopulse tracking feed for antennas in NASA/DSN ground stations.

Sub-pluvial Saqqara and its possible impact on ancient Egyptian civilization in the Old Kingdom Period (4600 - 4100 yrs BP)

NASA Astrophysics Data System (ADS)

Welc, Fabian; Marks, Leszek

2014-05-01

). A role of these wet intervals is incontestable and they can represent a sub-pluvial episode with two peaks at about 4600 and 4200 yrs BP, presumably of regional significance for north-eastern Africa. The authors suggest to name this relatively wet period the Saqqara Sub-pluvial. Based on the present knowledge, the extremely dynamic terminal phase of the second peak of the Saqqara Sub-pluvial and the following sudden desertification noted in deposits at archaeological sites in Saqqara and in the adjoining area (Abusir, Giza) should be roughly correlated with global climatic perturbation of the 3rd Bond Event or 4.2 ka Rapid Climate Change. The climate change in that time resulted in a collapse of the Egyptian civilization but also in rapid depopulation of Palestine, disintegration of the Acadian Empire in Mesopotamia and the Harappa Civilization in northwest India. Mechanism of this climate change is investigated within the project funded by National Science Centre in Poland (decision no. DEC-2012/05/B/ST10/00558).

Mars Reconnaissance Orbiter Ka-band (32 GHz) Demonstration: Cruise Phase Operations

NASA Technical Reports Server (NTRS)

Shambayati, Shervin; Morabito, David; Border, James S.; Davarian, Faramaz; Lee, Dennis; Mendoza, Ricardo; Britcliffe, Michael; Weinreb, Sander

2006-01-01

The X-band (8.41 GHz) frequency currently used for deep space telecommunications is too narrow (50 MHz) to support future high rate missions. Because of this NASA has decided to transition to Ka-band (32 GHz) frequencies. As weather effects cause much larger fluctuations on Ka-band than on X-band, the traditional method of using a few dBs of margin to cover these fluctuations is wasteful of power for Ka-band; therefore, a different operations concept is needed for Ka-band links. As part of the development of the operations concept for Ka-band, NASA has implemented a fully functioning Ka-band communications suite on its Mars Reconnaissance Orbiter (MRO). This suite will be used during the primary science phase to develop and refine the Ka-band operations concept for deep space missions. In order to test the functional readiness of the spacecraft and the Deep Space Network's (DSN) readiness to support the demonstration activities a series of passes over DSN 34-m Beam Waveguide (BWG) antennas were scheduled during the cruise phase of the mission. MRO was launched on August 12, 2005 from Kennedy Space Center, Cape Canaveral, Florida, USA and went into Mars Orbit on March 10, 2006. A total of ten telemetry demonstration and one high gain antenna (HGA) calibration passes were allocated to the Ka-band demonstration. Furthermore, a number of "shadow" passes were also scheduled where, during a regular MRO track over a Ka-band capable antenna, Ka-band was identically configured as the X-band and tracked by the station. In addition, nine Ka-band delta differential one way ranging ((delta)DOR) passes were scheduled. During these passes, the spacecraft and the ground system were put through their respective paces. Among the highlights of these was setting a single day record for data return from a deep space spacecraft (133 Gbits) achieved during one 10-hour pass; achieving the highest data rate ever from a planetary mission (6 Mbps) and successfully demonstrating Ka-band DDOR

Preliminary study of land-plant biomarkers in marine sediments of Alfonso basin and its relationship with the climate of the last 3.5 ka

NASA Astrophysics Data System (ADS)

Ricaurte-Villota, Constanza; Gonzalez-Yajimovich, Oscar; Betancourt-Portela, Julian

2014-05-01

This study used biomarkers such as n-alkanes, especially focused on the long chain n-alkanes and some diagnostic indexes derived from abundance, to elucidate molecular changes in the contribution of organic matter to the sediments, especially terrestrial vegetation surrounding continental areas around of Alfonso basin in response to climate change, particularly changes in the hydrological cycle. The results show that in general the n-alkanes of organic matter (OM) of Alfonso basin sediments are composed of a mixture of waxes derived from phytoplankton and terrestrial plants, with a greater contribution from phytoplankton compare to terrestrial vegetation, in the oldest part of the record, associated with a marine productivity increased period favored by rainfall. Maximum abundance of C29, and high values of C27/C31 ratio indicate leaves from trees as a source wax, probably succulents plants characteristic of arid zones, with C3 as one of their metabolic pathway, identified from mean ACL values around 29.5. The low CPI index indicates contamination and microbial communities as a possible source of long chain n-alkanes, probably due to anoxic bottom conditions in Alfonso basin favor the development of these communities. Finally, it is suggested no change in the community, at least for the last ~ 3.5 ka BP, but increased cover vegetation (biomass) in southern California during periods of increased rainfall (from ~ 3.5 to ~ 1.7 ka BP). The ability of terrestrial plant communities to adapt for longer periods before being replaced by other species, when faced with gradual changes rather than rapid climate change is reflected in a few changes in its composition.

VizieR Online Data Catalog: Photometry/spectroscopic measurements for KA1858+4850 (Pei+, 2014)

NASA Astrophysics Data System (ADS)

Pei, L.; Barth, A. J.; Aldering, G. S.; Briley, M. M.; Carroll, C. J.; Carson, D. J.; Cenko, S. B.; Clubb, K. I.; Cohen, D. P.; Cucchiara, A.; Desjardins, T. D.; Edelson, R.; Fang, J. J.; Fedrow, J. M.; Filippenko, A. V.; Fox, O. D.; Furniss, A.; Gates, E. L.; Gregg, M.; Gustafson, S.; Horst, J. C.; Joner, M. D.; Kelly, P. L.; Lacy, M.; Laney, C. D.; Leonard, D. C.; Li, W.; Malkan, M. A.; Margon, B.; Neeleman, M.; Nguyen, M. L.; Prochaska, J. X.; Ross, N. R.; Sand, D. J.; Searcy, K. J.; Shivvers, I. S.; Silverman, J. M.; Smith, G. H.; Suzuki, N.; Smith, K. L.; Tytler, D.; Werk, J. K.; Worseck, G.

2017-05-01

We employed the Lick Observatory 3 m Shane telescope with the Kast Spectrograph and five other ground-based telescopes to spectroscopically and photometrically monitor KA1858+4850 from 2012 February to November. Reverberation mapping requires a continuum light curve with high sampling cadence and S/N. To achieve this, we obtained V-band images from ground-based telescopes and used aperture photometry to construct a light curve for KA1858+4850 that has nearly nightly sampling for a span of 290 days. For several reasons, we chose to use the V-band light curve rather than the Kepler light curve for reverberation measurements. (2 data files).

Microdeletion/microduplication of proximal 15q11.2 between BP1 and BP2: a susceptibility region for neurological dysfunction including developmental and language delay.

PubMed

Burnside, Rachel D; Pasion, Romela; Mikhail, Fady M; Carroll, Andrew J; Robin, Nathaniel H; Youngs, Erin L; Gadi, Inder K; Keitges, Elizabeth; Jaswaney, Vikram L; Papenhausen, Peter R; Potluri, Venkateswara R; Risheg, Hiba; Rush, Brooke; Smith, Janice L; Schwartz, Stuart; Tepperberg, James H; Butler, Merlin G

2011-10-01

The proximal long arm of chromosome 15 has segmental duplications located at breakpoints BP1-BP5 that mediate the generation of NAHR-related microdeletions and microduplications. The classical Prader-Willi/Angelman syndrome deletion is flanked by either of the proximal BP1 or BP2 breakpoints and the distal BP3 breakpoint. The larger Type I deletions are flanked by BP1 and BP3 in both Prader-Willi and Angelman syndrome subjects. Those with this deletion are reported to have a more severe phenotype than individuals with either Type II deletions (BP2-BP3) or uniparental disomy 15. The BP1-BP2 region spans approximately 500 kb and contains four evolutionarily conserved genes that are not imprinted. Reports of mutations or disturbed expression of these genes appear to impact behavioral and neurological function in affected individuals. Recently, reports of deletions and duplications flanked by BP1 and BP2 suggest an association with speech and motor delays, behavioral problems, seizures, and autism. We present a large cohort of subjects with copy number alteration of BP1 to BP2 with common phenotypic features. These include autism, developmental delay, motor and language delays, and behavioral problems, which were present in both cytogenetic groups. Parental studies demonstrated phenotypically normal carriers in several instances, and mildly affected carriers in others, complicating phenotypic association and/or causality. Possible explanations for these results include reduced penetrance, altered gene dosage on a particular genetic background, or a susceptibility region as reported for other areas of the genome implicated in autism and behavior disturbances.

Determination of the pKa of the N-terminal amino group of ubiquitin by NMR

PubMed Central

Oregioni, Alain; Stieglitz, Benjamin; Kelly, Geoffrey; Rittinger, Katrin; Frenkiel, Tom

2017-01-01

Ubiquitination regulates nearly every aspect of cellular life. It is catalysed by a cascade of three enzymes and results in the attachment of the C-terminal carboxylate of ubiquitin to a lysine side chain in the protein substrate. Chain extension occurs via addition of subsequent ubiquitin molecules to either one of the seven lysine residues of ubiquitin, or via its N-terminal α-amino group to build linear ubiquitin chains. The pKa of lysine side chains is around 10.5 and hence E3 ligases require a mechanism to deprotonate the amino group at physiological pH to produce an effective nucleophile. In contrast, the pKa of N-terminal α-amino groups of proteins can vary significantly, with reported values between 6.8 and 9.1, raising the possibility that linear chain synthesis may not require a general base. In this study we use NMR spectroscopy to determine the pKa for the N-terminal α-amino group of methionine1 of ubiquitin for the first time. We show that it is 9.14, one of the highest pKa values ever reported for this amino group, providing a rational for the observed need for a general base in the E3 ligase HOIP, which synthesizes linear ubiquitin chains. PMID:28252051

Profile of NF-κBp(65/NFκBp50) among prostate specific antigen sera levels in prostatic pathologies.

PubMed

Bouraoui, Y; Ben Jemaa, A; Rodriguez, G; Ben Rais, N; Fraile, B; Paniagua, R; Sellemi, S; Royuela, M; Oueslati, R

2012-10-01

The aim of this work was to characterise the immunoexpression of NF-κB (p50/p65) in human prostatic pathologies and to study its profiles of activation among sera prostate specific antigen antigen (PSA) according the three groups: 0-4ng/mL, 4-20ng/mL and >20ng/mL. Twenty-four men with benign prostate hyperplasia (BPH); 19 men with prostate cancer (PC) and five men with normal prostates (NP). Immunohistochemical and western blot analysis was performed. Serum levels of PSA were assayed by immulite autoanalyser. In BPH and PC samples, immunoexpressions were observed for NF-κBp65 and NF-κBp50; while in NP samples, only were detected NF-κBp50. PC samples showed immunoreactions to NF-κBp65 and NF-κBp50 more intense (respectively 24.18±0.67 and 28.23±2.01) than that observed in BPH samples (respectively18.46±2.04 and 18.66±1.59) with special localisation in the nucleus. Different profiles of NF-κBp65 immunoexpressions were observed and BPH patients with sera PSA levels between 0-4ng/mL presented a significant weak percentage compared to BPH patients with sera PSA levels between 4-20ng/mL and >20ng/mL. No immunoreactions to NF-κBp65 were observed in PC patients with sera PSA levels between 4-20ng/mL. The sensibility of both NF-κB and PSA to inflammation allowed confirming the relationship between these two molecules and its involvement in prostatic diseases progression (inflammatory and neoplasic). Copyright © 2011 Elsevier Masson SAS. All rights reserved.

pKa Modulation of the Acid/Base Catalyst within GH32 and GH68: A Role in Substrate/Inhibitor Specificity?

PubMed Central

Yuan, Shuguang; Le Roy, Katrien; Venken, Tom; Lammens, Willem; Van den Ende, Wim; De Maeyer, Marc

2012-01-01

Glycoside hydrolases of families 32 (GH32) and 68 (GH68) belong to clan GH-J, containing hydrolytic enzymes (sucrose/fructans as donor substrates) and fructosyltransferases (sucrose/fructans as donor and acceptor substrates). In GH32 members, some of the sugar substrates can also function as inhibitors, this regulatory aspect further adding to the complexity in enzyme functionalities within this family. Although 3D structural information becomes increasingly available within this clan and huge progress has been made on structure-function relationships, it is not clear why some sugars bind as inhibitors without being catalyzed. Conserved aspartate and glutamate residues are well known to act as nucleophile and acid/bases within this clan. Based on the available 3D structures of enzymes and enzyme-ligand complexes as well as docking simulations, we calculated the pKa of the acid-base before and after substrate binding. The obtained results strongly suggest that most GH-J members show an acid-base catalyst that is not sufficiently protonated before ligand entrance, while the acid-base can be fully protonated when a substrate, but not an inhibitor, enters the catalytic pocket. This provides a new mechanistic insight aiming at understanding the complex substrate and inhibitor specificities observed within the GH-J clan. Moreover, besides the effect of substrate entrance on its own, we strongly suggest that a highly conserved arginine residue (in the RDP motif) rather than the previously proposed Tyr motif (not conserved) provides the proton to increase the pKa of the acid-base catalyst. PMID:22662155

The impact of the BP Baker report.

PubMed

Rodríguez, Jennifer M; Payne, Stephanie C; Bergman, Mindy E; Beus, Jeremy M

2011-06-01

This study examined the impact of the British Petroleum (BP) Baker Panel Report, reviewing the March 2005 BP-Texas City explosion, on the field of process safety. Three hundred eighty-four subscribers of a process safety listserv responded to a survey two years after the BP Baker Report was published. Results revealed respondents in the field of process safety are familiar with the BP Baker Report, feel it is important to the future safety of chemical processing, and believe that the findings are generalizable to other plants beyond BP-Texas City. Respondents indicated that few organizations have administered the publicly available BP Process Safety Culture Survey. Our results also showed that perceptions of contractors varied depending on whether respondents were part of processing organizations (internal perspective) or government or consulting agencies (external perspective). This research provides some insight into the beliefs of chemical processing personnel regarding the transportability and generalizability of lessons learned from one organization to another. This study has implications for both organizational scientists and engineers in that it reveals perceptions about the primary mechanism used to share lessons learned within one industry about one major catastrophe (i.e., investigation reports). This study provides preliminary information about the perceived impact of a report such as this one. Copyright © 2011 National Safety Council and Elsevier Ltd. All rights reserved.

Global calibration/validation of 2 years of SARAL/AltiKa data

NASA Astrophysics Data System (ADS)

Scharroo, Remko; Lillibridge, John; Leuliette, Eric; Bonekamp, Hans

2015-04-01

The AltiKa altimeter flying onboard the French/Indian SARAL satellite provides the first opportunity to examine Ka-band measurements of sea surface height, significant wave height and ocean surface wind speed. In this presentation we provide the results from our global calibration/validation analysis of the AltiKa measurements, with an emphasis on near real-time applications of interest to both EUMETSAT and NOAA. Traditional along-track SSHA, and single as well as dual-satellite crossover assessments of the AltiKa performance are be provided. Unique aspects of the AltiKa mission such as improved along-track resolution, reduced ionospheric path delay corrections, mission-specific wind speed and sea state bias corrections, and sensitivity to liquid moisture and rain are also explored. In February 2014, a major update to the ground processing was introduced. "Patch-2" improved the way wind speed was derived from altimeter backscatter, as suggested by Lillibridge et al. (1). The backscatter attenuation is now derived from the radiometer measurements via neural network algorithms, which also determine the wet tropospheric correction. We emphasize these improvements in our analysis. After 2 years in flight, SARAL/AltiKa is already providing a significant contribution to the constellation of operational radar altimetry missions, demonstrating the large benefits of high-rate Ka-band altimetry. (1) Lillibridge, John, Remko Scharroo, Saleh Abdalla, Doug Vandemark, 2014: One- and Two-Dimensional Wind Speed Models for Ka-Band Altimetry. J. Atmos. Oceanic Technol., 31, 630-638. doi: http://dx.doi.org/10.1175/JTECH-D-13-00167.1

Intensified summer monsoon and the urbanization of Indus Civilization in northwest India.

PubMed

Dixit, Yama; Hodell, David A; Giesche, Alena; Tandon, Sampat K; Gázquez, Fernando; Saini, Hari S; Skinner, Luke C; Mujtaba, Syed A I; Pawar, Vikas; Singh, Ravindra N; Petrie, Cameron A

2018-03-09

Today the desert margins of northwest India are dry and unable to support large populations, but were densely occupied by the populations of the Indus Civilization during the middle to late Holocene. The hydroclimatic conditions under which Indus urbanization took place, which was marked by a period of expanded settlement into the Thar Desert margins, remains poorly understood. We measured the isotopic values (δ 18 O and δD) of gypsum hydration water in paleolake Karsandi sediments in northern Rajasthan to infer past changes in lake hydrology, which is sensitive to changing amounts of precipitation and evaporation. Our record reveals that relatively wet conditions prevailed at the northern edge of Rajasthan from ~5.1 ± 0.2 ka BP, during the beginning of the agricultural-based Early Harappan phase of the Indus Civilization. Monsoon rainfall intensified further between 5.0 and 4.4 ka BP, during the period when Indus urban centres developed in the western Thar Desert margin and on the plains of Haryana to its north. Drier conditions set in sometime after 4.4 ka BP, and by ~3.9 ka BP an eastward shift of populations had occurred. Our findings provide evidence that climate change was associated with both the expansion and contraction of Indus urbanism along the desert margin in northwest India.

Sequence stratigraphy of the subaqueous Changjiang (Yangtze River) delta since the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Xu, Taoyu; Wang, Guoqing; Shi, Xuefa; Wang, Xin; Yao, Zhengquan; Yang, Gang; Fang, Xisheng; Qiao, Shuqing; Liu, Shengfa; Wang, Xuchen; Zhao, Quanhong

2016-01-01

This study focuses on sedimentary research at the subaqueous Changjiang (Yangtze River) delta, based on five high-resolution seismic profiles and seven borehole cores with accurate AMS 14C datings. Three distinct seismic units were identified from the seismic profiles according to seismic reflection characteristics, and five sedimentary facies were recognized from borehole cores. These facies constituted a fining upward sedimentary sequence in relation to postglacial sea-level transgression. Three sequence surfaces (sequence boundary (SB), transgressive surface (TS), and maximum flooding surface (MFS)) demarcate the boundaries between early transgressive system tract (E-TST), late transgressive system tract (L-TST), early highstand system tract (E-HST) and late highstand system tract (L-HST), which constitute the sixth order sequence. These system tracts were developed coevally with postglacial sea-level rise. E-TST (~ 19-12 ka BP) corresponds to an incised-valley infilling in the early stages of postglacial transgression whereas L-TST (~ 12-7.5 ka BP) was formed during the last stage of postglacial transgression. The progradational structure of L-TST reflected in seismic profiles is possibly related to the intensification of the East Asian summer monsoon. E-HST (~ 7.5-2 ka BP) was deposited in response to the highstand after maximum postglacial transgression was reached, while L-HST (~ 2 ka BP-present) was initiated by accelerated progradation of the Changjiang delta.

The signal extraction of fetal heart rate based on wavelet transform and BP neural network

NASA Astrophysics Data System (ADS)

Yang, Xiao Hong; Zhang, Bang-Cheng; Fu, Hu Dai

2005-04-01

This paper briefly introduces the collection and recognition of bio-medical signals, designs the method to collect FM signals. A detailed discussion on the system hardware, structure and functions is also given. Under LabWindows/CVI,the hardware and the driver do compatible, the hardware equipment work properly actively. The paper adopts multi threading technology for real-time analysis and makes use of latency time of CPU effectively, expedites program reflect speed, improves the program to perform efficiency. One threading is collecting data; the other threading is analyzing data. Using the method, it is broaden to analyze the signal in real-time. Wavelet transform to remove the main interference in the FM and by adding time-window to recognize with BP network; Finally the results of collecting signals and BP networks are discussed. 8 pregnant women's signals of FM were collected successfully by using the sensor. The correctness rate of BP network recognition is about 83.3% by using the above measure.

Pollen-based biomes for Beringia 18,000, 6000 and 0 14C yr BP

USGS Publications Warehouse

Edwards, M.E.; Anderson, P.M.; Brubaker, L.B.; Ager, T.A.; Andreev, A.A.; Bigelow, N.H.; Cwynar, L.C.; Eisner, Wendy R.; Harrison, S.P.; Hu, F.-S.; Jolly, D.; Lozhkin, A.V.; MacDonald, G.M.; Mock, Cary J.; Ritchie, J.C.; Sher, A.V.; Spear, R.W.; Williams, J.W.; Yu, G.

2000-01-01

The objective biomization method developed by Prentice et al. (1996) for Europe was extended using modern pollen samples from Beringia and then applied to fossil pollen data to reconstruct palaeovegetation patterns at 6000 and 18,000 14C yr BP. The predicted modern distribution of tundra, taiga and cool conifer forests in Alaska and north-western Canada generally corresponds well to actual vegetation patterns, although sites in regions characterized today by a mosaic of forest and tundra vegetation tend to be preferentially assigned to tundra. Siberian larch forests are delimited less well, probably due to the extreme under-representation of Larix in pollen spectra. The biome distribution across Beringia at 6000 14C yr BP was broadly similar to today, with little change in the northern forest limit, except for a possible northward-advance in the Mackenzie delta region. The western forest limit in Alaska was probably east of its modern position. At 18,000 14C yr BP the whole of Beringia was covered by tundra. However, the importance of the various plant functional types varied from site to site, supporting the idea that the vegetation cover was a mosaic of different tundra types.

Genome-wide profiles of CtBP link metabolism with genome stability and epithelial reprogramming in breast cancer.

PubMed

Di, Li-Jun; Byun, Jung S; Wong, Madeline M; Wakano, Clay; Taylor, Tara; Bilke, Sven; Baek, Songjoon; Hunter, Kent; Yang, Howard; Lee, Maxwell; Zvosec, Cecilia; Khramtsova, Galina; Cheng, Fan; Perou, Charles M; Miller, C Ryan; Raab, Rachel; Olopade, Olufunmilayo I; Gardner, Kevin

2013-01-01

The C-terminal binding protein (CtBP) is a NADH-dependent transcriptional repressor that links carbohydrate metabolism to epigenetic regulation by recruiting diverse histone-modifying complexes to chromatin. Here global profiling of CtBP in breast cancer cells reveals that it drives epithelial-to-mesenchymal transition, stem cell pathways and genome instability. CtBP expression induces mesenchymal and stem cell-like features, whereas CtBP depletion or caloric restriction reverses gene repression and increases DNA repair. Multiple members of the CtBP-targeted gene network are selectively downregulated in aggressive breast cancer subtypes. Differential expression of CtBP-targeted genes predicts poor clinical outcome in breast cancer patients, and elevated levels of CtBP in patient tumours predict shorter median survival. Finally, both CtBP promoter targeting and gene repression can be reversed by small molecule inhibition. These findings define broad roles for CtBP in breast cancer biology and suggest novel chromatin-based strategies for pharmacologic and metabolic intervention in cancer.

BP artificial neural network based wave front correction for sensor-less free space optics communication

NASA Astrophysics Data System (ADS)

Li, Zhaokun; Zhao, Xiaohui

2017-02-01

The sensor-less adaptive optics (AO) is one of the most promising methods to compensate strong wave front disturbance in free space optics communication (FSO). The back propagation (BP) artificial neural network is applied for the sensor-less AO system to design a distortion correction scheme in this study. This method only needs one or a few online measurements to correct the wave front distortion compared with other model-based approaches, by which the real-time capacity of the system is enhanced and the Strehl Ratio (SR) is largely improved. Necessary comparisons in numerical simulation with other model-based and model-free correction methods proposed in Refs. [6,8,9,10] are given to show the validity and advantage of the proposed method.

Paleointensity results for 0 and 4 ka from Hawaiian lava flows: a new approach to sampling

NASA Astrophysics Data System (ADS)

Cromwell, G.; Tauxe, L.; Staudigel, H.; Ron, H.; Trusdell, F.

2012-04-01

Paleointensity data are typically generated from core samples drilled out of the massive parts of lava flows. During Thellier-Thellier type experiments, these massive samples suffer from very low success rates (~20%), as shown by failure to meet statistical criteria. Low success generally occurs for two reasons: 1) alteration of the sample during the heating process, and 2) multi-domain behavior of massive material. Moreover, recent studies of historical lava flows show that massive samples may not accurately reflect the intensity of the magnetic field even when they are successful (Valet et al., 2010). Alternatively, submarine basaltic glasses (SBG) produce high success rates (~80%) for Thellier-Thellier type experiments, likely due to near instantaneous cooling rates which produce single-domain magnetic grains. In addition, SBG have been proven to produce accurate records of the magnetic field (e.g., Pick and Tauxe, 1993). In this study we investigate the success of paleointensity experiments on subaerial quenched basalts from Hawaii in the quest for single domain, rapidly cooled subaerial analogs to SBG. We also examine the effects of grain size and cooling rate on the accuracy of paleointensity results. During March 2011, we collected samples from 31 dated lava flows (0-3800 BP), including the historical 1950 C.E. and 2010 C.E. flows. Each lava flow was additionally subsampled when unique cooling structures within the unit could be identified. Single-domain, rapidly quenched glasses from the 1950 and 2010 flows are ideally behaved, i.e. straight Arai plots, and accurately record the expected geomagnetic field strength. However, slower cooled specimens from the same flows produce sagged Arai plots and consistently underestimate expected geomagnetic field intensity. Results from ideally behaved glasses over the last 4 ka indicate periods of rapid field change in Hawaii and a possible high intensity field spike around 2.7 ka. We will present new results from our

Critical evaluation of climate syntheses to benchmark CMIP6/PMIP4 127 ka Last Interglacial simulations in the high-latitude regions

NASA Astrophysics Data System (ADS)

Capron, E.; Govin, A.; Feng, R.; Otto-Bliesner, B. L.; Wolff, E. W.

2017-07-01

The Last Interglacial (LIG, ∼129-116 thousand years ago, ka) represents an excellent case study to investigate the response of sensitive components of the Earth System and mechanisms of high-latitude amplification to a climate warmer than present-day. The Paleoclimate Model Intercomparison Project (Phase 4, hereafter referred as PMIP4) and the Coupled Model Intercomparison Project (Phase 6, hereafter referred as CMIP6) are coordinating the design of (1) a LIG Tier 1 equilibrium simulation to simulate the climate response at 127 ka, a time interval associated with a strong orbital forcing and greenhouse gas concentrations close to preindustrial levels and (2) associated Tier 2 sensitivity experiments to examine the role of the ocean, vegetation and dust feedbacks in modulating the response to this orbital forcing. Evaluating the capability of the CMIP6/PMIP4 models to reproduce the 127 ka polar and sub-polar climate will require appropriate data-based benchmarks which are currently missing. Based on a recent data synthesis that offers the first spatio-temporal representation of high-latitude (i.e. poleward of 40°N and 40°S) surface temperature evolution during the LIG, we produce a new 126-128 ka time slab, hereafter named 127 ka time slice. This 127 ka time slice represents surface temperature anomalies relative to preindustrial and is associated with quantitative estimates of the uncertainties related to relative dating and surface temperature reconstruction methods. It illustrates warmer-than-preindustrial conditions in the high-latitude regions of both hemispheres. In particular, summer sea surface temperatures (SST) in the North Atlantic region were on average 1.1 °C (with a standard error of the mean of 0.7 °C) warmer relative to preindustrial and 1.8 °C (with a standard error of the mean of 0.8 °C) in the Southern Ocean. In Antarctica, average 127 ka annual surface air temperature was 2.2 °C (with a standard error of the mean of 1.4 °C) warmer

Environment and paleoecology of a 12 ka mid-North American Younger Dryas forest chronicled in tree rings

USGS Publications Warehouse

Panyushkina, Irina P.; Leavitt, Steven W.; Thompson, Todd A.; Schneider, Allan F.; Lange, Todd

2008-01-01

Until now, availability of wood from the Younger Dryas abrupt cooling event (YDE) in N. America ca. 12.9 to 11.6 ka has been insufficient to develop high-resolution chronologies for refining our understanding of YDE conditions. Here we present a multi-proxy tree-ring chronology (ring widths, “events” evidenced by microanatomy and macro features, stable isotopes) from a buried black spruce forest in the Great Lakes area (Liverpool East site), spanning 116 yr at ca. 12,000 cal yr BP. During this largely cold and wet period, the proxies convey a coherent and precise forest history including frost events, tilting, drowning and burial in estuarine sands as the Laurentide Ice Sheet deteriorated. In the middle of the period, a short mild interval appears to have launched the final and largest episode of tree recruitment. Ultimately the tops of the trees were sheared off after death, perhaps by wind-driven ice floes, culminating an interval of rising water and sediment deposition around the base of the trees. Although relative influences of the continental ice sheet and local effects from ancestral Lake Michigan are indeterminate, the tree-ring proxies provide important insight into environment and ecology of a N. American YDE boreal forest stand.

Reconstructed Depositional Environment and Climate Record of Western North America Over the Past 25,000 Years from Tulare Lake, South-Central California

NASA Astrophysics Data System (ADS)

Mohammadi, O.; Wehunt, K.; Chumpitaz, G. A.; Bravo, B.; Ruiz, J.; Dhesi, H.; Halling, M. C.; Pyles, C. G.; Guo, J.; Negrini, R. M.

2016-12-01

Tulare Lake, located in the southern San Joaquin Valley, California has been the site of repeated geologic and paleoclimate studies due to its well preserved sedimentary record based on core, trench exposures, and the mapping of geomorphic features. Yet, no studies have focused on the effect of depositional environment variations on mineralogy. In this study, a series of integrated geochemical, sedimentary, and grain-size climate proxy data from core TL05-4A encompassing the last 25 cal. ka BP were analyzed. Preliminary sedimentary results as determined by X-ray diffraction (XRD) reveal a clay-dominant mineral assemblage containing variable smectite, illite, kaolinite, and chlorite followed by a secondary non-clay contribution in the form of quartz, feldspar, and calcite. The relative abundance of these minerals varies with depth and is tied to regional shifts in climate as best exemplified by an observed rapid increase in bulk clay percentages (+50%) after the Tioga deglaciation event ( 14 cal. ka BP). Six climosequences were determined—three wet periods interspaced by three dry episodes over the last 25 ka. Two important dry periods characterized by gypsum and bassanite occurred from 10.7-9.4 cal. ka BP (Preboreal warming) and 8.2-5.2 cal. ka BP (Holocene Climate Optimum) indicating oxygen depletion, more intense evaporation, and reducing conditions in the lake. These abrupt dry phases may help explain the geographic range reduction and extirpation of Mammuthus primigenius and other North American megafanua as warmer and dryer regional conditions led to enhanced water stress and diminished net primary productivity.

p Ka determinations of xanthene derivates in aqueous solutions by multivariate analysis applied to UV-Vis spectrophotometric data

NASA Astrophysics Data System (ADS)

Batistela, Vagner Roberto; Pellosi, Diogo Silva; de Souza, Franciane Dutra; da Costa, Willian Ferreira; de Oliveira Santin, Silvana Maria; de Souza, Vagner Roberto; Caetano, Wilker; de Oliveira, Hueder Paulo Moisés; Scarminio, Ieda Spacino; Hioka, Noboru

2011-09-01

Xanthenes form to an important class of dyes which are widely used. Most of them present three acid-base groups: two phenolic sites and one carboxylic site. Therefore, the p Ka determination and the attribution of each group to the corresponding p Ka value is a very important feature. Attempts to obtain reliable p Ka through the potentiometry titration and the electronic absorption spectrophotometry using the first and second orders derivative failed. Due to the close p Ka values allied to strong UV-Vis spectral overlap, multivariate analysis, a powerful chemometric method, is applied in this work. The determination was performed for eosin Y, erythrosin B, and bengal rose B, and also for other synthesized derivatives such as 2-(3,6-dihydroxy-9-acridinyl) benzoic acid, 2,4,5,7-tetranitrofluorescein, eosin methyl ester, and erythrosin methyl ester in water. These last two compounds (esters) permitted to attribute the p Ka of the phenolic group, which is not easily recognizable for some investigated dyes. Besides the p Ka determination, the chemometry allowed for estimating the electronic spectrum of some prevalent protolytic species and the substituents effects evaluation.

Risk assessment of logistics outsourcing based on BP neural network

NASA Astrophysics Data System (ADS)

Liu, Xiaofeng; Tian, Zi-you

The purpose of this article is to evaluate the risk of the enterprises logistics outsourcing. To get this goal, the paper first analysed he main risks existing in the logistics outsourcing, and then set up a risk evaluation index system of the logistics outsourcing; second applied BP neural network into the logistics outsourcing risk evaluation and used MATLAB to the simulation. It proved that the network error is small and has strong practicability. And this method can be used by enterprises to evaluate the risks of logistics outsourcing.

Four-Way Ka-Band Power Combiner

NASA Technical Reports Server (NTRS)

Perez, Raul; Li, Samuel

2007-01-01

A waveguide structure for combining the outputs of four amplifiers operating at 35 GHz (Ka band) is based on a similar prior structure used in the X band. The structure is designed to function with low combining loss and low total reflected power at a center frequency of 35 GHz with a 160 MHz bandwidth. The structure (see figure) comprises mainly a junction of five rectangular waveguides in a radial waveguide. The outputs of the four amplifiers can be coupled in through any four of the five waveguide ports. Provided that these four signals are properly phased, they combine and come out through the fifth waveguide port.

Black Phosphorus (BP) Nanodots for Potential Biomedical Applications.

PubMed

Lee, Hyun Uk; Park, So Young; Lee, Soon Chang; Choi, Saehae; Seo, Soonjoo; Kim, Hyeran; Won, Jonghan; Choi, Kyuseok; Kang, Kyoung Suk; Park, Hyun Gyu; Kim, Hee-Sik; An, Ha Rim; Jeong, Kwang-Hun; Lee, Young-Chul; Lee, Jouhahn

2016-01-13

Recently, the appeal of 2D black phosphorus (BP) has been rising due to its unique optical and electronic properties with a tunable band gap (≈0.3-1.5 eV). While numerous research efforts have recently been devoted to nano- and optoelectronic applications of BP, no attention has been paid to promising medical applications. In this article, the preparation of BP-nanodots of a few nm to <20 nm with an average diameter of ≈10 nm and height of ≈8.7 nm is reported by a modified ultrasonication-assisted solution method. Stable formation of nontoxic phosphates and phosphonates from BP crystals with exposure in water or air is observed. As for the BP-nanodot crystals' stability (ionization and persistence of fluorescent intensity) in aqueous solution, after 10 d, ≈80% at 1.5 mg mL(-1) are degraded (i.e., ionized) in phosphate buffered saline. They showed no or little cytotoxic cell-viability effects in vitro involving blue- and green-fluorescence cell imaging. Thus, BP-nanodots can be considered a promising agent for drug delivery or cellular tracking systems. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Holocene moisture changes in western China, Central Asia, inferred from stalagmites

NASA Astrophysics Data System (ADS)

Cai, Yanjun; Chiang, John C. H.; Breitenbach, Sebastian F. M.; Tan, Liangcheng; Cheng, Hai; Edwards, R. Lawrence; An, Zhisheng

2017-02-01

Central Asia lies at the convergence between the Mediterranean and Asian monsoon climates, and there is a complex interaction between the westerlies with the monsoon to form the climate of that region and its variability. The region is highly vulnerable to changes in rainfall, highlighting the need to understand the underlying controls. We present a stalagmite-based δ18O record from Kesang Cave in western China, using MC-ICP-MS U-series dating and stable isotope analysis. Stalagmite calcite δ18O largely documents changes in the δ18O of precipitation. δ18O in stalagmites was low during the early and middle Holocene (10.0-3.0 ka BP), and shifted to higher values between 3.0 and 2.0 ka BP. After 2.0 ka BP, δ18O fluctuates with distinct centennial-scale variations. Drawing from results of state-of-the-art atmospheric general circulation model simulations for the preindustrial period and 9 ka BP, we propose that changes in moisture source regions and the wetter climate both contributed to the isotopic depletion of precipitation during the early and middle Holocene. Multiple records from surrounding regions indicate a generally wetter climate during the early and mid- Holocene, supporting our interpretation on the speleothem δ18O. Changes in precipitation seasonality do not appear to be a viable explanation for the observed changes, nor increased penetration of monsoonal moisture to the study site. We speculate that the climatic regime shifted around 3.0-2.0 ka BP towards a drier climate, resulting in temperature having dominant control on precipitation δ18O. The demise of three settlements around 500AD at the margin of Tarim Basin coincided with a period of decreased precipitation and increased temperature that likely affected local water resources, underscoring the potential impact of climate on human habitation in this region.

Unifying tephrostratigraphic approaches to redefine major Holocene marker tephras, Mt. Taranaki, New Zealand

NASA Astrophysics Data System (ADS)

Damaschke, M.; Cronin, S. J.; Torres-Orozco, R.; Wallace, R. C.

2017-05-01

In this study, geochemical fingerprinting of glass shards and titanomagnetite phenocrysts was used to match twenty complex pyroclastic deposits from the flanks of Mt. Taranaki to major tephra fall ;marker beds; in medial and distal deposition sites. These correlations hinged upon identifying time-bound compositional changes (a chemostratigraphy) in distal Taranaki tephra-fall sequences preserved in lake and peat sediment records around the volcano. The current work shows that previous soil-stratigraphy based studies led to miscorrelations, because they relied upon radiocarbon dates, a ;counting back; approach, and an underestimate of the number of eruptions that actually occurred in any time frame. The new tephrostratigraphy proposed at Mt. Taranaki resulted from stratigraphic rearranging of several earlier-defined units. Some tephra units are older than previously determined (e.g., Waipuku, Tariki, and Mangatoki; 6 to 9 cal ka BP), while one of the most prominent Taranaki marker tephra deposit, the Korito, is shown to lie stratigraphically above a widespread rhyolitic marker bed from Taupo volcano, the Stent Tephra (also known as unit Q; 4.3 cal ka BP). Pyroclastic tephra deposits previously dated between 6 to 4 cal ka BP at a key tephra section, c. 40 km NE of Mt. Taranaki's summit, were misidentified and are now shown to comprise new marker tephra deposits, including the Kokowai ( 4.7 cal ka BP), which is a prominent marker horizon on the eastern flanks of the volcano. A new local proximal stratigraphy for < 5 cal ka BP tephra units can be well correlated to tephra layers within distal lake and peat sequences, but the differences between the two records indicates an overall larger number of eruptions have occurred at this volcano than previously thought. This study additionally demonstrates the utility of titanomagnetite chemistry for discrimination and correlation of groups or sequences of tephra deposits - even if unique compositions cannot be identified.

Studying NASA's Transition to Ka-Band Communications for Low Earth Orbit

NASA Technical Reports Server (NTRS)

Chelmins, David; Reinhart, Richard; Mortensen, Dale; Welch, Bryan; Downey, Joseph; Evans, Mike

2014-01-01

As the S-band spectrum becomes crowded, future space missions will need to consider moving command and telemetry services to Ka-band. NASAs Space Communications and Navigation (SCaN) Testbed provides a software-defined radio (SDR) platform that is capable of supporting investigation of this service transition. The testbed contains two S-band SDRs and one Ka-band SDR. Over the past year, SCaN Testbed has demonstrated Ka-band communications capabilities with NASAs Tracking and Data Relay Satellite System (TDRSS) using both open- and closed-loop antenna tracking profiles. A number of technical areas need to be addressed for successful transition to Ka-band. The smaller antenna beamwidth at Ka-band increases the criticality of antenna pointing, necessitating closed loop tracking algorithms and new techniques for received power estimation. Additionally, the antenna pointing routines require enhanced knowledge of spacecraft position and attitude for initial acquisition, versus an S-band antenna. Ka-band provides a number of technical advantages for bulk data transfer. Unlike at S-band, a larger bandwidth may be available for space missions, allowing increased data rates. The potential for high rate data transfer can also be extended for direct-to-ground links through use of variable or adaptive coding and modulation. Specific examples of Ka-band research from SCaN Testbeds first year of operation will be cited, such as communications link performance with TDRSS, and the effects of truss flexure on antenna pointing.

Studying NASA's Transition to Ka-Band Communications for Low Earth Orbit

NASA Technical Reports Server (NTRS)

Chelmins, David T.; Reinhart, Richard C.; Mortensen, Dale; Welch, Bryan; Downey, Joseph; Evans, Michael

2014-01-01

As the S-band spectrum becomes crowded, future space missions will need to consider moving command and telemetry services to Ka-band. NASA's Space Communications and Navigation (SCaN) Testbed provides a software-defined radio (SDR) platform that is capable of supporting investigation of this service transition. The testbed contains two S-band SDRs and one Ka-band SDR. Over the past year, SCaN Testbed has demonstrated Ka-band communications capabilities with NASAs Tracking and Data Relay Satellite System (TDRSS) using both open- and closed-loop antenna tracking profiles. A number of technical areas need to be addressed for successful transition to Ka-band. The smaller antenna beamwidth at Ka-band increases the criticality of antenna pointing, necessitating closed loop tracking algorithms and new techniques for received power estimation. Additionally, the antenna pointing routines require enhanced knowledge of spacecraft position and attitude for initial acquisition, versus an S-band antenna. Ka-band provides a number of technical advantages for bulk data transfer. Unlike at S-band, a larger bandwidth may be available for space missions, allowing increased data rates. The potential for high rate data transfer can also be extended for direct-to-ground links through use of variable or adaptive coding and modulation. Specific examples of Ka-band research from SCaN Testbeds first year of operation will be cited, such as communications link performance with TDRSS, and the effects of truss flexure on antenna pointing.

Past climate variability between 97 and 7 ka reconstructed from a multi proxy speleothem record from Western Cuba

NASA Astrophysics Data System (ADS)

Winterhalder, Sophie; Scholz, Denis; Mangini, Augusto; Spötl, Christoph; Jochum, Klaus Peter; Pajón, Jesús M.

2016-04-01

The tropical hydrological cycle plays a key role in regulating global climate, mainly through the export of heat and moisture to higher latitudes, and is highly sensitive to climate change, for instance due to changes in the position of the Intertropical Convergence Zone (ITCZ). Previous work on Caribbean stalagmites suggests a strong connection of precipitation variability to North Atlantic (NA) sea surface temperatures on multidecadal to millenial timescales (Fensterer et al., 2012; Fensterer et al., 2013; Winter et al., 2011). Cold phases in the NA potentially lead to a southward shift of the ITCZ and thus drier conditions in Cuba. On orbital timescales, Cuban stalagmites suggest a relation of speleothem δ18O values with the δ18O value of Caribbean surface waters (Fensterer et al., 2013). Here we present an expansion of the Cuban speleothem record covering the whole last glacial period from the end of MIS5c (97 ka BP) until 7 ka with hiatuses between 93-80 ka, 37-35 ka and 13-10 ka. Stalagmite Cuba medio (CM) has been precisely dated with 60 230Th/U-ages, mainly performed by the MC-ICPMS technique. The δ18O and δ13C records are completed by a continuous, high resolution LA-ICPMS trace element profile. These data allow for the first time to establish a multi-proxy climate reconstruction for the North Western Caribbean at decadal to centennial resolution for this period. The long-term variability of the δ18O values probably reflects rainfall amount in Cuba. The response to some Dansgaard/Oeschger and Heinrich stadials confirms the previously observed correlation between Caribbean and NA climate variability. However, this connection is not clearly imprinted throughout the record. Furthermore, trace elements, such as Mg, do not proof without ambiguity drier conditions in Cuba during NA cold events, such as the Heinrich stadials. This suggests that climate variability in Cuba was more complex during the last 100ka, and that the NA was not the only driving factor

Sea-Level Change in the Russian Arctic Since the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Horton, B.; Baranskaya, A.; Khan, N.; Romanenko, F. A.

2017-12-01

Relative sea-level (RSL) databases that span the Last Glacial Maximum (LGM) to present have been used to infer changes in climate, regional ice sheet variations, the rate and geographic source of meltwater influx, and the rheological structure of the solid Earth. Here, we have produced a quality-controlled RSL database for the Russian Arctic since the LGM. The database contains 394 index points, which locate the position of RSL in time and space, and 244 limiting points, which constrain the minimum or maximum limit of former sea level. In the western part of the Russian Arctic (Barents and White seas,) RSL was driven by glacial isostatic adjustment (GIA) due to deglaciation of the Scandinavian ice sheet, which covered the Baltic crystalline shield at the LGM. RSL data from isolation basins show rapid RSL from 80-100 m at 11-12 ka BP to 15-25 m at 4-5 ka BP. In the Arctic Islands of Franz-Joseph Land and Novaya Zemlya, RSL data from dated driftwood in raised beaches show a gradual fall from 25-35 m at 9-10 ka BP to 5-10 m at 3 ka BP. In the Russian plain, situated at the margins of the formerly glaciated Baltic crystalline shield, RSL data from raised beaches and isolation basins show an early Holocene rise from less than -20 m at 9-11 ka BP before falling in the late Holocene, illustrating the complex interplay between ice-equivalent meltwater input and GIA. The Western Siberian Arctic (Yamal and Gydan Peninsulas, Beliy Island and islands of the Kara Sea) was not glaciated at the LGM. Sea-level data from marine and salt-marsh deposits show RSL rise at the beginning of the Holocene to a mid-Holocene highstand of 1-5 m at 5-1 ka BP. A similar, but more complex RSL pattern is shown for Eastern Siberia. RSL data from the Laptev Sea shelf show RSL at -40- -45 m and 11-14 ka BP. RSL data from the Lena Delta and Tiksi region have a highstand from 5 to 1 ka BP. The research is supported by RSF project 17-77-10130

Sleep-time BP: prognostic marker of type 2 diabetes and therapeutic target for prevention.

PubMed

Hermida, Ramón C; Ayala, Diana E; Mojón, Artemio; Fernández, José R

2016-02-01

We investigated the prognostic value of clinic and ambulatory BP (ABP) to predict new-onset diabetes and whether risk reduction is related to the progressive decrease of clinic BP or awake or asleep ABP. We prospectively evaluated 2,656 individuals without diabetes, 1,292 men and 1,364 women, 50.6 ± 14.3 years of age, with baseline BP ranging from normotension to hypertension according to ABP criteria. At baseline and annually (more frequently if hypertension treatment was adjusted based on ABP) thereafter, ABP and physical activity (wrist actigraphy) were simultaneously monitored for 48 h to accurately derive the awake and asleep BP means. During a 5.9-year median follow-up, 190 participants developed type 2 diabetes. The asleep systolic ABP mean was the most significant predictor of new-onset diabetes in a Cox proportional-hazard model adjusted for age, waist circumference, glucose, chronic kidney disease (CKD) and hypertension treatment. Daytime clinic BP and awake or 48 h ABP mean had no predictive value when corrected by the asleep ABP mean. Analyses of BP changes during follow-up revealed a 30% reduction in the risk of new-onset diabetes per 1-SD decrease in asleep systolic ABP mean, independent of changes in clinic BP or awake or 48 h ABP means. Sleep-time BP is a highly significant independent prognostic marker for new-onset diabetes. Alteration in sleep-time BP regulation seems to precede, rather than follow, the development of new-onset diabetes. Most important, lowering asleep BP, a novel therapeutic target requiring ABP evaluation, could be a significant method for reducing new-onset diabetes risk.

Assembly of human C-terminal binding protein (CtBP) into tetramers.

PubMed

Bellesis, Andrew G; Jecrois, Anne M; Hayes, Janelle A; Schiffer, Celia A; Royer, William E

2018-06-08

C-terminal binding protein 1 (CtBP1) and CtBP2 are transcriptional coregulators that repress numerous cellular processes, such as apoptosis, by binding transcription factors and recruiting chromatin-remodeling enzymes to gene promoters. The NAD(H)-linked oligomerization of human CtBP is coupled to its co-transcriptional activity, which is implicated in cancer progression. However, the biologically relevant level of CtBP assembly has not been firmly established; nor has the stereochemical arrangement of the subunits above that of a dimer. Here, multi-angle light scattering (MALS) data established the NAD + - and NADH-dependent assembly of CtBP1 and CtBP2 into tetramers. An examination of subunit interactions within CtBP1 and CtBP2 crystal lattices revealed that both share a very similar tetrameric arrangement resulting from assembly of two dimeric pairs, with specific interactions probably being sensitive to NAD(H) binding. Creating a series of mutants of both CtBP1 and CtBP2, we tested the hypothesis that the crystallographically observed interdimer pairing stabilizes the solution tetramer. MALS data confirmed that these mutants disrupt both CtBP1 and CtBP2 tetramers, with the dimer generally remaining intact, providing the first stereochemical models for tetrameric assemblies of CtBP1 and CtBP2. The crystal structure of a subtle destabilizing mutant suggested that small structural perturbations of the hinge region linking the substrate- and NAD-binding domains are sufficient to weaken the CtBP1 tetramer. These results strongly suggest that the tetramer is important in CtBP function, and the series of CtBP mutants reported here can be used to investigate the physiological role of the tetramer. © 2018 Bellesis et al.

Ultra Small Aperture Terminal for Ka-Band SATCOM

NASA Technical Reports Server (NTRS)

Acosta, Roberto; Reinhart, Richard; Lee, Richard; Simons, Rainee

1997-01-01

An ultra small aperture terminal (USAT) at Ka-band frequency has been developed by Lewis Research Center (LeRC) for data rates up to 1.5 Mbps in the transmit mode and 40 Mbps in receive mode. The terminal consists of a 35 cm diameter offset-fed parabolic antenna which is attached to a solid state power amplifier and low noise amplifier. A single down converter is used to convert the Ka-band frequency to 70 MHz intermediate frequency (IF). A variable rate (9.6 Kbps to 10 Mbps) commercial modem with a standard RS-449/RS-232 interface is used to provide point-to-point digital services. The terminal has been demonstrated numerous times using the Advanced Communications Technology Satellite (ACTS) and the 4.5 in Link Evaluation Terminal (LET) in Cleveland. A conceptual design for an advanced terminal has also been developed. This advanced USAT utilizes Microwave Monolithic Integrated Circuit (MMIC) and flat plate array technologies. This terminal will be self contained in a single package which will include a 1 watt solid state amplifier (SSPA), low noise amplifier (LNA) and a modem card located behind the aperture of the array. The advanced USAT will be light weight, transportable, low cost and easy to point to the satellite. This paper will introduce designs for the reflector based and array based USAT's.

Around and beyond 53BP1 Nuclear Bodies.

PubMed

Fernandez-Vidal, Anne; Vignard, Julien; Mirey, Gladys

2017-12-05

Within the nucleus, sub-nuclear domains define territories where specific functions occur. Nuclear bodies (NBs) are dynamic structures that concentrate nuclear factors and that can be observed microscopically. Recently, NBs containing the p53 binding protein 1 (53BP1), a key component of the DNA damage response, were defined. Interestingly, 53BP1 NBs are visualized during G1 phase, in daughter cells, while DNA damage was generated in mother cells and not properly processed. Unlike most NBs involved in transcriptional processes, replication has proven to be key for 53BP1 NBs, with replication stress leading to the formation of these large chromatin domains in daughter cells. In this review, we expose the composition and organization of 53BP1 NBs and focus on recent findings regarding their regulation and dynamics. We then concentrate on the importance of the replication stress, examine the relation of 53BP1 NBs with DNA damage and discuss their dysfunction.

Around and beyond 53BP1 Nuclear Bodies

PubMed Central

Fernandez-Vidal, Anne; Vignard, Julien

2017-01-01

Within the nucleus, sub-nuclear domains define territories where specific functions occur. Nuclear bodies (NBs) are dynamic structures that concentrate nuclear factors and that can be observed microscopically. Recently, NBs containing the p53 binding protein 1 (53BP1), a key component of the DNA damage response, were defined. Interestingly, 53BP1 NBs are visualized during G1 phase, in daughter cells, while DNA damage was generated in mother cells and not properly processed. Unlike most NBs involved in transcriptional processes, replication has proven to be key for 53BP1 NBs, with replication stress leading to the formation of these large chromatin domains in daughter cells. In this review, we expose the composition and organization of 53BP1 NBs and focus on recent findings regarding their regulation and dynamics. We then concentrate on the importance of the replication stress, examine the relation of 53BP1 NBs with DNA damage and discuss their dysfunction. PMID:29206178

ACTS Ka-Band Earth Stations: Technology, Performance, and Lessons Learned

NASA Technical Reports Server (NTRS)

Reinhart, Richard C.; Struharik, Steven J.; Diamond, John J.; Stewart, David

2000-01-01

The Advanced Communications Technology Satellite (ACTS) Project invested heavily in prototype Ka-band satellite ground terminals to conduct an experiments program with the ACTS satellite. The ACTS experiment's program proposed to validate Ka-band satellite and ground station technology. demonstrate future telecommunication services. demonstrate commercial viability and market acceptability of these new services, evaluate system networking and processing technology, and characterize Ka-band propagation effects, including development of techniques to mitigate signal fading. This paper will present a summary of the fixed ground terminals developed by the NASA Glenn Research Center and its industry partners, emphasizing the technology and performance of the terminals (Part 1) and the lessons learned throughout their six year operation including the inclined orbit phase of operations (Full Report). An overview of the Ka-band technology and components developed for the ACTS ground stations is presented. Next. the performance of the ground station technology and its evolution during the ACTS campaign are discussed to illustrate the technical tradeoffs made during the program and highlight technical advances by industry to support the ACTS experiments program and terminal operations. Finally. lessons learned during development and operation of the user terminals are discussed for consideration of commercial adoption into future Ka-band systems. The fixed ground stations used for experiments by government, academic, and commercial entities used reflector based offset-fed antenna systems ranging in size from 0.35m to 3.4m antenna diameter. Gateway earth stations included two systems, referred to as the NASA Ground Station (NGS) and the Link Evaluation Terminal (LET). The NGS provides tracking, telemetry, and control (TT&C) and Time Division Multiple Access (TDMA) network control functions. The LET supports technology verification and high data rate experiments. The ground

High-precision 14C and 40Ar/39Ar dating of the Campanian Ignimbrite (Y-5) reconciles the time-scales of climatic-cultural processes at 40 ka.

PubMed

Giaccio, Biagio; Hajdas, Irka; Isaia, Roberto; Deino, Alan; Nomade, Sebastien

2017-04-06

The Late Pleistocene Campanian Ignimbrite (CI) super-eruption (Southern Italy) is the largest known volcanic event in the Mediterranean area. The CI tephra is widely dispersed through western Eurasia and occurs in close stratigraphic association with significant palaeoclimatic and Palaeolithic cultural events. Here we present new high-precision 14 C (34.29 ± 0.09 14 C kyr BP, 1σ) and 40 Ar/ 39 Ar (39.85 ± 0.14 ka, 95% confidence level) dating results for the age of the CI eruption, which substantially improve upon or augment previous age determinations and permit fuller exploitation of the chronological potential of the CI tephra marker. These results provide a robust pair of 14 C and 40 Ar/ 39 Ar ages for refining both the radiocarbon calibration curve and the Late Pleistocene time-scale at ca. 40 ka. In addition, these new age constraints provide compelling chronological evidence for the significance of the combined influence of the CI eruption and Heinrich Event 4 on European climate and potentially evolutionary processes of the Early Upper Palaeolithic.

High-precision 14C and 40Ar/39Ar dating of the Campanian Ignimbrite (Y-5) reconciles the time-scales of climatic-cultural processes at 40 ka

PubMed Central

Giaccio, Biagio; Hajdas, Irka; Isaia, Roberto; Deino, Alan; Nomade, Sebastien

2017-01-01

The Late Pleistocene Campanian Ignimbrite (CI) super-eruption (Southern Italy) is the largest known volcanic event in the Mediterranean area. The CI tephra is widely dispersed through western Eurasia and occurs in close stratigraphic association with significant palaeoclimatic and Palaeolithic cultural events. Here we present new high-precision 14C (34.29 ± 0.09 14C kyr BP, 1σ) and 40Ar/39Ar (39.85 ± 0.14 ka, 95% confidence level) dating results for the age of the CI eruption, which substantially improve upon or augment previous age determinations and permit fuller exploitation of the chronological potential of the CI tephra marker. These results provide a robust pair of 14C and 40Ar/39Ar ages for refining both the radiocarbon calibration curve and the Late Pleistocene time-scale at ca. 40 ka. In addition, these new age constraints provide compelling chronological evidence for the significance of the combined influence of the CI eruption and Heinrich Event 4 on European climate and potentially evolutionary processes of the Early Upper Palaeolithic. PMID:28383570

LPJ-GUESS Simulated North America Vegetation for 21-0 ka Using the TraCE-21ka Climate Simulation

NASA Astrophysics Data System (ADS)

Shafer, S. L.; Bartlein, P. J.

2016-12-01

Transient climate simulations that span multiple millennia (e.g., TraCE-21ka) have become more common as computing power has increased, allowing climate models to complete long simulations in relatively short periods of time (i.e., months). These climate simulations provide information on the potential rate, variability, and spatial expression of past climate changes. They also can be used as input data for other environmental models to simulate transient changes for different components of paleoenvironmental systems, such as vegetation. Long, transient paleovegetation simulations can provide information on a range of ecological processes, describe the spatial and temporal patterns of changes in species distributions, and identify the potential locations of past species refugia. Paleovegetation simulations also can be used to fill in spatial and temporal gaps in observed paleovegetation data (e.g., pollen records from lake sediments) and to test hypotheses of past vegetation change. We used the TraCE-21ka transient climate simulation for 21-0 ka from CCSM3, a coupled atmosphere-ocean general circulation model. The TraCE-21ka simulated temperature, precipitation, and cloud data were regridded onto a 10-minute grid of North America. These regridded climate data, along with soil data and atmospheric carbon dioxide concentrations, were used as input to LPJ-GUESS, a general ecosystem model, to simulate North America vegetation from 21-0 ka. LPJ-GUESS simulates many of the processes controlling the distribution of vegetation (e.g., competition), although some important processes (e.g., dispersal) are not simulated. We evaluate the LPJ-GUESS-simulated vegetation (in the form of plant functional types and biomes) for key time periods and compare the simulated vegetation with observed paleovegetation data, such as data archived in the Neotoma Paleoecology Database. In general, vegetation simulated by LPJ-GUESS reproduces the major North America vegetation patterns (e

Human occupation and environmental change in Holocene from a case of XDW2 relic site in the Tibetan Plateau at above 4000 meters above sea level.

NASA Astrophysics Data System (ADS)

Hou, G.; Li, F.; Zhu, Y.

2017-12-01

XDW2 is an important microlithic cultural relics with continuous stratum that is located in the the Tibetan plateau at above 4,000 masl, wich is a window of revealing the evolution of early human activities and the response and adaptation to extreme environmental in the principal part of Tibetan plateau. So it has important research significance. The analysis on human activity indicator(stoneware, potsherds) and environmental indicators(magnetic susceptibility, color, granularity and pollen) showed: the winter wind and dust storm intensity is weak in this area during 7.0-6 cal. Ka BP, pedogenesis is strong, the climate is humid, environment is suitable relatively, when is Holocene Megathermal; the active phase of microlithic human activities occurred during 7.2-6 cal. ka BP, and quickly weakened after 6 cal. ka BP. The number of stone tools reveal that human activities are concentrated before and after 7-6.2 cal. ka BP, charcoal fragmental concentration indicates that microlithic human activity reached the peak at around 6.7 cal. ka BP. Thus relatively suitable environment during Holocene Megathermal is the important motivating factor of active hunter-gatherer activities in the principal part of Tibetan plateau. After 6 cal. ka BP, summer monsoon weakened rapidly, agricultural growers in the Loess Plateau began to expand towards the plateau, under the effect of environmental degradation and new technologies, microlithic hunter-gatherers in the principal part of plateau moved towards the river valley at low altitude, and learnt settlement and plantation, microlithic activity in the main plateau began to decline.

Silicon-Germanium Films Grown on Sapphire for Ka-Band Communications Applications

NASA Technical Reports Server (NTRS)

Alterovitz, Samuel A.; Mueller, Carl H.; Croke, Edward T.

2004-01-01

NASA's vision in the space communications area is to develop a broadband data network in which there is a high degree of interconnectivity among the various satellite systems, ground stations, and wired systems. To accomplish this goal, we will need complex electronic circuits integrating analog and digital data handling at the Ka-band (26 to 40 GHz). The purpose of this project is to show the feasibility of a new technology for Ka-band communications applications, namely silicon germanium (SiGe) on sapphire. This new technology will have several advantages in comparison to the existing silicon-substrate- based circuits. The main advantages are extremely low parasitic reactances that enable much higher quality active and passive components, better device isolation, higher radiation tolerance, and the integration of digital and analog circuitry on a single chip.

Mid Holocene climate change and impact on evolution on human settlements in northern central Europe

NASA Astrophysics Data System (ADS)

Krossa, V. R.; Kim, H.-J.; Moros, M.; Dörfler, W.; Blanz, T.; Sinninghe Damsté, J. S.; Schneider, R.

2012-04-01

The Mid Holocene climate evolution in the North Atlantic was marked by a climate optimum, followed by a transition toward colder conditions, starting at about 6 ka BP. This climate transition was accompanied by a radical change from a hunter-gatherer-fisher society toward a society based on agriculture and the domestication of animals in northern Germany and Denmark. The aim of this study is to better understand the potential impact of oceanic and terrestrial climate change on such human societies in northern Germany and Denmark. We present paleoclimatic and paleoecological reconstructions from sites surrounding the landscape where these human groups settled during the Mid Holocene. These reconstructions include a high resolution UK'37 Sea Surface Temperature (SST) record from the Skagerrak, an MBT-CBT record for estimating lake temperature from Lake Belau, Northern Germany using the calibration set of Tierney et al. (2010), and a Loss On Ignition (LOI) record representing the anoxic/oxic state from the Gotland Basin, Baltic Sea. The UK'37 record is interpreted to reflect warm season SSTs, and shows a step-like temperature drop of about 6 °C from 6.5 to 5.0 ka BP, immediately followed by a 2 °C warming at about 5.0 ka BP. The MBT-CBT lake record probably reflects mean annual temperature at our site. The record suggests mild winters and/or warm summers until 5.3 ka BP, followed by 2 °C colder conditions within 500 years. The temperature proxies suggest a positive mode in North Atlantic Oscillation (NAO) until around 5.3 ka BP, followed by conditions typical of a negative NAO mode. Furthermore, the LOI record from the Gotland Basin implies a trend from oxic to more anoxic conditions, starting at ~5.8 ka BP. More severe anoxic conditions could have led to an ecosystem shift within the Baltic Sea, resulting in a decline of copepods, codfish and seals, thus influencing mesolithic hunting activity. The climatic and ecological changes that affected the Baltic Sea might

Holocene climate variability in the western Mediterranean through a multiproxy analysis from Padul peat bog (Sierra Nevada, Spain)

NASA Astrophysics Data System (ADS)

Ramos-Román, María J.; Jiménez-Moreno, Gonzalo; Camuera, Jon; García-Alix, Antonio; Anderson, R. Scott; Jiménez-Espejo, Francisco J.; Sachse, Dirk

2017-04-01

The Iberian Peninsula, located in the Mediterranean area, is an interesting location for paleoclimate studies due to its geographic situation between arid and humid climates. Sediments from peat bogs and lakes from Sierra Nevada, in southeastern Iberian Peninsula, have been very informative in terms of how vegetation and wetland environments were impacted by Holocene climate change. These studies are essential if we want to understand the past climate change in the area, which is the key to identify the possible environmental response of the Sierra Nevada ecosystems to future climate scenarios. Padul basin, located in the southwest of the Sierra Nevada mountain range, contains a ca. 100 m-thick peat bog sedimentary sequence that was deposited during the past 1 Ma making this area interesting for paleoenvironmental and paleoclimatic reconstructions. A new 43 m-long sedimentary record has recently been retrieved from the Padul peat bog. In this study we have developed a multiproxy analysis of the Holocene part of the Padul-15-05 core including pollen analysis, XRF-core scanner, magnetic susceptibility and organic geochemistry, supported by an age control based on AMS radiocarbon dates, providing with information about vegetation and climate variability during the past 9.9 cal ka BP. This multiproxy reconstruction of the Padul-15-05 evidences the Mediterranean as a sensitive area with respect to global-scale climate system, showing relevant climate episodes such as the ca. 8, 7.5, 6.5 and 5.5 cal ka BP events during the early and middle Holocene. The trend to aridification to the late Holocene is interrupted by more arid and humid periods as the Iberian Roman Humid Period (from ca. 3 to 1.6 cal ka BP), the Dark Ages (from ca. 1.5 to 1.1 cal ka BP), the Medieval Climate Anomaly (from ca. 1.1 to 1.3 cal ka BP) and the Little Ice Age period (from ca. 500 to 100 cal yr BP).

Gate-Controlled BP-WSe2 Heterojunction Diode for Logic Rectifiers and Logic Optoelectronics.

PubMed

Li, Dong; Wang, Biao; Chen, Mingyuan; Zhou, Jun; Zhang, Zengxing

2017-06-01

p-n junctions play an important role in modern semiconductor electronics and optoelectronics, and field-effect transistors are often used for logic circuits. Here, gate-controlled logic rectifiers and logic optoelectronic devices based on stacked black phosphorus (BP) and tungsten diselenide (WSe 2 ) heterojunctions are reported. The gate-tunable ambipolar charge carriers in BP and WSe 2 enable a flexible, dynamic, and wide modulation on the heterojunctions as isotype (p-p and n-n) and anisotype (p-n) diodes, which exhibit disparate rectifying and photovoltaic properties. Based on such characteristics, it is demonstrated that BP-WSe 2 heterojunction diodes can be developed for high-performance logic rectifiers and logic optoelectronic devices. Logic optoelectronic devices can convert a light signal to an electric one by applied gate voltages. This work should be helpful to expand the applications of 2D crystals. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Design of a Ka-Band Propagation Terminal for Atmospheric Measurements in Polar Regions

NASA Technical Reports Server (NTRS)

Houts, Jacquelynne R.; Nessel, James A.; Zemba, Michael J.

2016-01-01

This paper describes the design and performance of a Ka-Band beacon receiver developed at NASA Glenn Research Center (GRC) that will be installed alongside an existing Ka-Band Radiometer [2] located at the east end of the Svalbard Near Earth Network (NEN) complex. The goal of this experiment is to characterize rain fade attenuation to improve the performance of existing statistical rain attenuation models. The ground terminal developed by NASA GRC utilizes an FFT-based frequency estimation [3] receiver capable of characterizing total path attenuation effects due to gaseous absorption, clouds, rain, and scintillation by directly measuring the propagated signal from the satellite Thor 7.

Design of a Ka-band Propagation Terminal for Atmospheric Measurements in Polar Regions

NASA Technical Reports Server (NTRS)

Houts, Jacquelynne R.; Nessel, James A.; Zemba, Michael J.

2016-01-01

This paper describes the design and performance of a Ka-Band beacon receiver developed at NASA Glenn Research Center (GRC) that will be installed alongside an existing Ka-Band Radiometer located at the east end of the Svalbard Near Earth Network (NEN) complex. The goal of this experiment is to characterize rain fade attenuation to improve the performance of existing statistical rain attenuation models. The ground terminal developed by NASA GRC utilizes an FFT-based frequency estimation receiver capable of characterizing total path attenuation effects due to gaseous absorption, clouds, rain, and scintillation by directly measuring the propagated signal from the satellite Thor 7.

Centennial and millennial-scale hydroclimate changes in northwestern Patagonia since 16,000 yr BP

NASA Astrophysics Data System (ADS)

Moreno, Patricio I.; Videla, Javiera

2016-10-01

We examine hydroclimate changes at centennial/millennial timescales since 16,000 yr BP in northwestern Patagonia based on the pollen and charcoal record from Lago El Salto, a small closed-basin lake located in the Chilean Lake District (41°38‧48.02″S, 73° 5‧48.42″W). We observe cold/wet conditions between 14,500-16,000 yr BP, followed by further cooling with increased precipitation until 13,000 yr BP, enhanced precipitation seasonality and/or variability between 11,600-13,000 yr BP, and an extended warm-and-dry interval between 7600 and 11,300 yr BP with peak paleofire activity. Colder-and-wetter than present conditions and muted paleofire activity prevail between 5300 and 7600 yr BP, followed by alternating cold/wet and centennial-scale warm/dry phases starting at 5300 yr BP with three conspicuous megadroughts since 2500 yr BP. The most recent megadrought occurred during the Medieval Climate Anomaly. We identify a cold reversal that spans the Antarctic Cold Reversal (ACR) and the Younger Dryas (YD) chrons with stronger-than-present westerly influence during the former and enhanced variability during the latter. These results extend the northern limit of strong cooling and increase in precipitation during the ACR and the southern limit of influence of strong hydrologic variations during the YD in terrestrial environments, suggesting an overlap in the spheres of influence of processes originating from southern and northern polar latitudes. An extended warm southern westerly wind (SWW)-minimum interval is evident between 7600 and 11,300 yr BP, followed by a rapid shift to cool-moist conditions between 5300 and 7600 yr BP brought by a mid-Holocene SWW maximum. Since then we observe centennial-scale hydroclimate variability, which has driven biodiversity and fire-regime shifts of evergreen temperate rainforests.

Experimental study of overland flow resistance coefficient model of grassland based on BP neural network

NASA Astrophysics Data System (ADS)

Jiao, Peng; Yang, Er; Ni, Yong Xin

2018-06-01

The overland flow resistance on grassland slope of 20° was studied by using simulated rainfall experiments. Model of overland flow resistance coefficient was established based on BP neural network. The input variations of model were rainfall intensity, flow velocity, water depth, and roughness of slope surface, and the output variations was overland flow resistance coefficient. Model was optimized by Genetic Algorithm. The results show that the model can be used to calculate overland flow resistance coefficient, and has high simulation accuracy. The average prediction error of the optimized model of test set is 8.02%, and the maximum prediction error was 18.34%.

The Last Interglacial sea level change: new evidence from the Abrolhos islands, West Australia

NASA Astrophysics Data System (ADS)

Eisenhauer, A.; Zhu, Z. R.; Collins, L. B.; Wyrwoll, K. H.; Eichstätter, R.

U-series ages measured by thermal ionisation mass spectrometry (TIMS) are reported for a Last Interglacial (LI) fossil coral core from the Turtle Bay, Houtman Abrolhos islands, western Australia. The core is 33.4m long the top of which is approximately 5ma.p.s.l. (above present sea level). From the 232Th concentrations and the reliability of the U-series ages, two sections in the core can be distinguished. Calculated U/Th ages in core sectionI (3.3ma.p.s.l to 11mb.p.s.l) vary between 124+/-1.7kaBP (3.3ma.p.s.l.) and 132.5+/-1.8ka (4mb.p.s.l., i.e. below present sea level), and those of sectionII (11-23mb.p.s.l.) between 140+/-3 and 214+/-5kaBP, respectively. The ages of core sectionI are in almost perfect chronological order, whereas for sectionII no clear age-depth relationship of the samples can be recognised. Further assessments based on the ∂234U(T) criteria reveal that none of the samples of core sectionII give reliable ages, whereas for core sectionI several samples can be considered to be moderately reliable within 2ka. The data of the Turtle Bay core complement and extend our previous work from the Houtman Abrolhos showing that the sea level reached a height of approximately 4mb.p.s.l at approximately 134kaBP and a sea level highstand of at least 3.3ma.p.s.l. at approximately 124kaBP. Sea level dropped below its present position at approximately 116kaBP. Although the new data are in general accord with the Milankovitch theory of climate change, a detailed comparison reveals considerable differences between the Holocenand LI sea level rise as monitored relative to the Houtman Abrolhos islands. These observation apparently add further evidence to the growing set of data that the LI sea level rise started earlier than recognised by SPECMAP chronology. A reconciliation of these contradictionary observations following the line of arguments presented by Crowley (1994) are discussed with respect to the Milankovitch theory.

Developing hybrid approaches to predict pKa values of ionizable groups

PubMed Central

Witham, Shawn; Talley, Kemper; Wang, Lin; Zhang, Zhe; Sarkar, Subhra; Gao, Daquan; Yang, Wei

2011-01-01

Accurate predictions of pKa values of titratable groups require taking into account all relevant processes associated with the ionization/deionization. Frequently, however, the ionization does not involve significant structural changes and the dominating effects are purely electrostatic in origin allowing accurate predictions to be made based on the electrostatic energy difference between ionized and neutral forms alone using a static structure. On another hand, if the change of the charge state is accompanied by a structural reorganization of the target protein, then the relevant conformational changes have to be taken into account in the pKa calculations. Here we report a hybrid approach that first predicts the titratable groups, which ionization is expected to cause conformational changes, termed “problematic” residues, then applies a special protocol on them, while the rest of the pKa’s are predicted with rigid backbone approach as implemented in multi-conformation continuum electrostatics (MCCE) method. The backbone representative conformations for “problematic” groups are generated with either molecular dynamics simulations with charged and uncharged amino acid or with ab-initio local segment modeling. The corresponding ensembles are then used to calculate the pKa of the “problematic” residues and then the results are averaged. PMID:21744395

Benzo[a]pyrene (BP) DNA adduct formation in DNA repair–deficient p53 haploinsufficient [Xpa(−/−)p53(+/−)] and wild-type mice fed BP and BP plus chlorophyllin for 28 days

PubMed Central

Poirier, Miriam C.

2012-01-01

We have evaluated DNA damage (DNA adduct formation) after feeding benzo[a]pyrene (BP) to wild-type (WT) and cancer-susceptible Xpa(−/−)p53(+/−) mice deficient in nucleotide excision repair and haploinsufficient for the tumor suppressor p53. DNA damage was evaluated by high-performance liquid chromatography/electrospray ionization tandem mass spectrometry (HPLC/ES-MS/MS), which measures r7,t8,t9-trihydroxy-c-10-(N 2-deoxyguanosyl)-7,8,9,10-tetrahydrobenzo[a]pyrene (BPdG), and a chemiluminescence immunoassay (CIA), using anti-r7,t8-dihydroxy-t-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene (BPDE)–DNA antiserum, which measures both BPdG and the other stable BP-DNA adducts. When mice were fed 100 ppm BP for 28 days, BP-induced DNA damage measured in esophagus, liver and lung was typically higher in Xpa(−/−)p53(+/−) mice, compared with WT mice. This result is consistent with the previously observed tumor susceptibility of Xpa(−/−)p53(+/−) mice. BPdG, the major DNA adduct associated with tumorigenicity, was the primary DNA adduct formed in esophagus (a target tissue in the mouse), whereas total BP-DNA adducts predominated in higher levels in the liver (a non-target tissue in the mouse). In an attempt to lower BP-induced DNA damage, we fed the WT and Xpa(−/−)p53(+/−) mice 0.3% chlorophyllin (CHL) in the BP-containing diet for 28 days. The addition of CHL resulted in an increase of BP–DNA adducts in esophagus, liver and lung of WT mice, a lowering of BPdG in esophagi of WT mice and livers of Xpa(−/−)p53(+/−) mice and an increase of BPdG in livers of WT mice. Therefore, the addition of CHL to a BP-containing diet showed a lack of consistent chemoprotective effect, indicating that oral CHL administration may not reduce PAH–DNA adduct levels consistently in human organs. PMID:22828138

Determination of radiocarbon reservoir age of Lake Van by mineral magnetic and geochemical analysis

NASA Astrophysics Data System (ADS)

Makaroglu, Ozlem; Namik Cagatay, M.; Pesonen, Lauri J.; Orbay, Naci

2017-04-01

Lake Van is the largest soda lake in the world, located on the east Anatolian Plateau in Turkey. Its varved sediments provide an excellent archive of high-resolution paleoclimate record for the Near East. Varve counting and radiocarbon methods are therefore important dating techniques for investigating the Lake Van sedimentary paleoclimate record. In here we present detailed magnetic and geochemical record of Lake Van. We have studied 4.56 m (core VP0801) and 4.70 m (core VP0807) long cores recovered from 80 m and 65 m water depths located in SE and SW of Lake Van, respectively. Here, we have benefited from magnetic properties with associated remanent magnetization of the sediments from Lake Van to correlate the cores which contain of tephra layers. The cores cover the last 8.4 ka and lithologically include three laminated sedimentary units. From top to the bottom, the units were dated 4.2 ka BP-present, 5.4-4.2 ka BP and older than 5.4 ka BP. We identified tephra layers previously dated by varve counting, and used the varve ages to obtain age models for the cores. We also obtained a total of eight Accelerator Mass Spectrometry (AMS) 14C dates from total organic carbon (TOC) in the two cores, close to the tephra layers. Comparison of the varve ages of the AMS 14C dated samples with their corresponding AMS 14C dates indicates large differences, suggesting significant reservoir ages that range from 2.8 to 2.5 ka for 3.0-2.4 varve ka BP and from 2.8 to 3.3 ka for 8.0-5.9 varve ka BP. The results suggest that the reservoir age of the organic matter increases with the varve age of the sediments. This increase is mainly related to the rate of supply of "dead" carbon from the old carbonate rocks in the watershed of Lake Van, which was relatively higher during 8.4-5.9 ka than during 3.0-2.4 ka BP because of the higher atmospheric precipitation and higher rate of biochemical weathering during the former period.

Late Glacial-Holocene ecostratigraphy of the south-eastern Aegean Sea, based on plankton and pollen assemblages

NASA Astrophysics Data System (ADS)

Triantaphyllou, M. V.; Antonarakou, A.; Kouli, K.; Dimiza, M.; Kontakiotis, G.; Papanikolaou, M. D.; Ziveri, P.; Mortyn, P. G.; Lianou, V.; Lykousis, V.; Dermitzakis, M. D.

2009-08-01

Quantitative analyses of coccolithophores, planktonic foraminifers, dinoflagellate cysts and pollen assemblages were carried out on shallow (NS-14) and deeper (NS-40) sediment cores from the south-eastern Aegean Sea. Nine coccolithophore (ACE 1-9) and nine planktonic foraminifer (APFE 1-9) ecozones, correlated with dinoflagellate cyst evidence, have been defined for the last ~14.5 cal. ka. Additionally, eight pollen assemblage zones (PAZ 1-8) have been recognised and correlated with the plankton ecozones. Although generally consistent with existing schemes for the central and eastern Mediterranean, the established high-resolution ecostratigraphy has led to an expanded palaeoecological reconstruction of the Late Glacial-Holocene archive in the south-eastern Aegean Sea, defining two warm and humid phases at 9.3-8.6 and 7.6-6.4 cal. ka b.p., associated with the deposition of the early Holocene sapropel S1, and a third one between 5.2 and 4.2 cal. ka b.p. The high sedimentation rates which characterise the study area enabled the detection of even minor and brief climatic events in the Aegean Sea during S1 deposition times. [InlineMediaObject not available: see fulltext.

RanBP9 at the intersection between cofilin and Aβ pathologies: rescue of neurodegenerative changes by RanBP9 reduction.

PubMed

Woo, J A; Boggess, T; Uhlar, C; Wang, X; Khan, H; Cappos, G; Joly-Amado, A; De Narvaez, E; Majid, S; Minamide, L S; Bamburg, J R; Morgan, D; Weeber, E; Kang, D E

2015-03-05

Molecular pathways underlying the neurotoxicity and production of amyloid β protein (Aβ) represent potentially promising therapeutic targets for Alzheimer's disease (AD). We recently found that overexpression of the scaffolding protein RanBP9 increases Aβ production in cell lines and in transgenic mice while promoting cofilin activation and mitochondrial dysfunction. Translocation of cofilin to mitochondria and induction of cofilin-actin pathology require the activation/dephosphorylation of cofilin by Slingshot homolog 1 (SSH1) and cysteine oxidation of cofilin. In this study, we found that endogenous RanBP9 positively regulates SSH1 levels and mediates Aβ-induced translocation of cofilin to mitochondria and induction of cofilin-actin pathology in cultured cells, primary neurons, and in vivo. Endogenous level of RanBP9 was also required for Aβ-induced collapse of growth cones in immature neurons (days in vitro 9 (DIV9)) and depletion of synaptic proteins in mature neurons (DIV21). In vivo, amyloid precursor protein (APP)/presenilin-1 (PS1) mice exhibited 3.5-fold increased RanBP9 levels, and RanBP9 reduction protected against cofilin-actin pathology, synaptic damage, gliosis, and Aβ accumulation associated with APP/PS1 mice. Brains slices derived from APP/PS1 mice showed significantly impaired long-term potentiation (LTP), and RanBP9 reduction significantly enhanced paired pulse facilitation and LTP, as well as partially rescued contextual memory deficits associated with APP/PS1 mice. Therefore, these results underscore the critical importance of endogenous RanBP9 not only in Aβ accumulation but also in mediating the neurotoxic actions of Aβ at the level of synaptic plasticity, mitochondria, and cofilin-actin pathology via control of the SSH1-cofilin pathway in vivo.

Air Monitoring Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Water Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Waste Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Air Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Sediment Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Variable Penetrance of the 15q11.2 BP1-BP2 Microduplication in a Family with Cognitive and Language Impairment

PubMed Central

Benítez-Burraco, Antonio; Barcos-Martínez, Montserrat; Espejo-Portero, Isabel; Jiménez-Romero, Salud

2017-01-01

The 15q11.2 BP1-BP2 region is found duplicated or deleted in people with cognitive, language, and behavioral impairment. We report on a family (a father and 3 male twin siblings) that presents with a duplication of the 15q11.2 BP1-BP2 region and a variable phenotype: the father and the fraternal twin are normal carriers, whereas the monozygotic twins exhibit severe language and cognitive delay as well as behavioral disturbances. The genes located within the duplicated region are involved in brain development and function, and some of them are related to language processing. The probands' phenotype may result from changes in the expression level of some of these genes important for cognitive development. PMID:28588435

Pre-Flight Testing and Performance of a Ka-Band Software Defined Radio

NASA Technical Reports Server (NTRS)

Downey, Joseph A.; Reinhart, Richard C.; Kacpura, Thomas

2012-01-01

National Aeronautics and Space Administration (NASA) has developed a space-qualified, reprogrammable, Ka-band Software Defined Radio (SDR) to be utilized as part of an on-orbit, reconfigurable testbed. The testbed will operate on the truss of the International Space Station beginning in late 2012. Three unique SDRs comprise the testbed, and each radio is compliant to the Space Telecommunications Radio System (STRS) Architecture Standard. The testbed provides NASA, industry, other Government agencies, and academic partners the opportunity to develop communications, navigation, and networking applications in the laboratory and space environment, while at the same time advancing SDR technology, reducing risk, and enabling future mission capability. Designed and built by Harris Corporation, the Ka-band SDR is NASA's first space-qualified Ka-band SDR transceiver. The Harris SDR will also mark the first NASA user of the Ka-band capabilities of the Tracking Data and Relay Satellite System (TDRSS) for on-orbit operations. This paper describes the testbed's Ka-band System, including the SDR, travelling wave tube amplifier (TWTA), and antenna system. The reconfigurable aspects of the system enabled by SDR technology are discussed and the Ka-band system performance is presented as measured during extensive pre-flight testing.

A Novel Ku-Band/Ka-Band and Ka-Band/E-Band Multimode Waveguide Couplers for Power Measurement of Traveling-Wave Tube Amplifier Harmonic Frequencies

NASA Technical Reports Server (NTRS)

Wintucky, Edwin G.; Simons, Rainee N.

2015-01-01

This paper presents the design, fabrication and test results for a novel waveguide multimode directional coupler (MDC). The coupler, fabricated from two dissimilar frequency band waveguides, is capable of isolating power at the second harmonic frequency from the fundamental power at the output port of a traveling-wave tube (TWT) amplifier. Test results from proof-of-concept demonstrations are presented for a Ku-band/Ka-band MDC and a Ka-band/E-band MDC. In addition to power measurements at harmonic frequencies, a potential application of the MDC is in the design of a satellite borne beacon source for atmospheric propagation studies at millimeter-wave (mm-wave) frequencies (Ka-band and E-band).

TopBP1 is required at mitosis to reduce transmission of DNA damage to G1 daughter cells

PubMed Central

Pedersen, Rune Troelsgaard; Kruse, Thomas; Nilsson, Jakob

2015-01-01

Genome integrity is critically dependent on timely DNA replication and accurate chromosome segregation. Replication stress delays replication into G2/M, which in turn impairs proper chromosome segregation and inflicts DNA damage on the daughter cells. Here we show that TopBP1 forms foci upon mitotic entry. In early mitosis, TopBP1 marks sites of and promotes unscheduled DNA synthesis. Moreover, TopBP1 is required for focus formation of the structure-selective nuclease and scaffold protein SLX4 in mitosis. Persistent TopBP1 foci transition into 53BP1 nuclear bodies (NBs) in G1 and precise temporal depletion of TopBP1 just before mitotic entry induced formation of 53BP1 NBs in the next cell cycle, showing that TopBP1 acts to reduce transmission of DNA damage to G1 daughter cells. Based on these results, we propose that TopBP1 maintains genome integrity in mitosis by controlling chromatin recruitment of SLX4 and by facilitating unscheduled DNA synthesis. PMID:26283799

Evidence that Ribulose 1,5-Bisphosphate (RuBP) Binds to Inactive Sites of RuBP Carboxylase in Vivo and an Estimate of the Rate Constant for Dissociation 1

PubMed Central

Cardon, Zoe G.; Mott, Keith A.

1989-01-01

The binding of ribulose 1,5-bisphosphate (RuBP) to inactive (noncarbamylated) sites of the enzyme RuBP carboxylase in vivo was investigated in Spinacia oleracea and Helianthus annuus. The concentrations of RuBP and inactive sites were determined in leaf tissue as a function of time after a change to darkness. RuBP concentrations fell rapidly after the change to darkness and were approximately equal to the concentration of inactive sites after 60 s. Variations in the concentration of inactive sites, which were induced by differences in the light intensity before the light-dark transition, correlated with the concentration of RuBP between 60 and 120 s after the change to darkness. These data are discussed as evidence that RuBP binds to inactive sites of RuBP carboxylase in vivo. After the concentration of RuBP fell below that of inactive sites (at times longer than 60 s of darkness), the decline in RuBP was logarithmic with time. This would be expected if the dissociation of RuBP from inactive sites controlled the decline in RuBP concentration. These data were used to estimate the rate constant for dissociation of RuBP from inactive sites in vivo. PMID:16666692

Hunting for the LCT-13910*T Allele between the Middle Neolithic and the Middle Ages Suggests Its Absence in Dairying LBK People Entering the Kuyavia Region in the 8th Millennium BP

PubMed Central

Witas, Henryk W.; Płoszaj, Tomasz; Jędrychowska-Dańska, Krystyna; Witas, Piotr J.; Masłowska, Alicja; Jerszyńska, Blandyna; Kozłowski, Tomasz; Osipowicz, Grzegorz

2015-01-01

Populations from two medieval sites in Central Poland, Stary Brześć Kujawski-4 (SBK-4) and Gruczno, represented high level of lactase persistence (LP) as followed by the LCT-13910*T allele’s presence (0.86 and 0.82, respectively). It was twice as high as in contemporaneous Cedynia (0.4) and Śródka (0.43), both located outside the region, higher than in modern inhabitants of Poland (0.51) and almost as high as in modern Swedish population (0.9). In an attempt to explain the observed differences its frequency changes in time were followed between the Middle Neolithic and the Late Middle Ages in successive dairying populations on a relatively small area (radius ∼60km) containing the two sites. The introduction of the T allele to Kuyavia 7.4 Ka BP by dairying LBK people is not likely, as suggested by the obtained data. It has not been found in any of Neolithic samples dated between 6.3 and 4.5 Ka BP. The identified frequency profile indicates that both the introduction and the beginning of selection could have taken place approx. 4 millennia after first LBK people arrived in the region, shifting the value of LP frequency from 0 to more than 0.8 during less than 130 generations. We hypothesize that the selection process of the T allele was rather rapid, starting just after its introduction into already milking populations and operated via high rates of fertility and mortality on children after weaning through life-threatening conditions, favoring lactose-tolerant individuals. Facing the lack of the T allele in people living on two great European Neolithization routes, the Danubian and Mediterranean ones, and based on its high frequency in northern Iberia, its presence in Scandinavia and estimated occurrence in Central Poland, we propose an alternative Northern Route of its spreading as very likely. None of the successfully identified nuclear alleles turned out to be deltaF508 CFTR. PMID:25853887

Patterns of human occupation during the early Holocene in the Central Ebro Basin (NE Spain) in response to the 8.2 ka climatic event

NASA Astrophysics Data System (ADS)

González-Sampériz, P.; Utrilla, P.; Mazo, C.; Valero-Garcés, B.; Sopena, MC.; Morellón, M.; Sebastián, M.; Moreno, A.; Martínez-Bea, M.

2009-03-01

The Central Ebro River Basin (NE Spain) is the most northern area of truly semi-arid Mediterranean climate in Europe and prehistoric human occupation there has been strongly influenced by this extreme environmental condition. Modern climate conditions single out this region due to the harsh environment, characterised by the highest absolute summer temperatures of the Ebro River Basin. The Bajo Aragón region (SE Ebro River Basin) was intensively populated during the Early Holocene (9400-8200 cal yr BP) but the settlements were abandoned abruptly at around 8200 cal yr BP. We propose that this "archaeological silence" was caused by the regional impact of the global abrupt 8.2 ka cold event. Available regional paleoclimate archives demonstrate the existence of an aridity crisis then that interrupted the humid Early Holocene. That environmental crisis would have forced hunter-gatherer groups from the Bajo Aragón to migrate to regions with more favourable conditions (i.e. more humid mountainous areas) and only return in the Neolithic. Coherently, archaeological sites persist during this crisis in the nearby Iberian Range (Maestrazgo) and the North Ebro River area (Pre-Pyrenean mountains and along the northwestern Ebro Basin).

Deep Space Ka-band Link Management and the MRO Demonstration: Long-term Weather Statistics Versus Forecasting

NASA Technical Reports Server (NTRS)

Davarian, Faramaz; Shambayati, Shervin; Slobin, Stephen

2004-01-01

During the last 40 years, deep space radio communication systems have experienced a move toward shorter wavelengths. In the 1960s a transition from L- to S-band occurred which was followed by a transition from S- to X-band in the 1970s. Both these transitions provided deep space links with wider bandwidths and improved radio metrics capability. Now, in the 2000s, a new change is taking place, namely a move to the Ka-band region of the radio frequency spectrum. Ka-band will soon replace X-band as the frequency of choice for deep space communications providing ample spectrum for the high data rate requirements of future missions. The low-noise receivers of deep space networks have a great need for link management techniques that can mitigate weather effects. In this paper, three approaches for managing Ka-band Earth-space links are investigated. The first approach uses aggregate annual statistics, the second one uses monthly statistics, and the third is based on the short-term forecasting of the local weather. An example of weather forecasting for Ka-band link performance prediction is presented. Furthermore, spacecraft commanding schemes suitable for Ka-band link management are investigated. Theses schemes will be demonstrated using NASA's Mars Reconnaissance Orbiter (MRO) spacecraft in the 2007 to 2008 time period, and the demonstration findings will be reported in a future publication.

CacyBP/SIP promotes the proliferation of colon cancer cells

PubMed Central

Chen, Xiong; Wang, Jun; Lu, Yuanyuan; Zhang, Faming; Liu, Zhengxiong; Lei, Ting; Fan, Daiming

2017-01-01

CacyBP/SIP is a component of the ubiquitin pathway and is overexpressed in several transformed tumor tissues, including colon cancer, which is one of the most common cancers worldwide. It is unknown whether CacyBP/SIP promotes the proliferation of colon cancer cells. This study examined the expression level, subcellular localization, and binding activity of CacyBP/SIP in human colon cancer cells in the presence and absence of the hormone gastrin. We found that CacyBP/SIP was expressed in a high percentage of colon cancer cells, but not in normal colonic surface epithelium. CacyBP/SIP promoted the cell proliferation of colon cancer cells under both basal and gastrin stimulated conditions as shown by knockdown studies. Gastrin stimulation triggered the translocation of CacyBP/SIP to the nucleus, and enhanced interaction between CacyBP/SIP and SKP1, a key component of ubiquitination pathway which further mediated the proteasome-dependent degradation of p27kip1 protein. The gastrin induced reduction in p27kip1 was prevented when cells were treated with the proteasome inhibitor MG132. These results suggest that CacyBP/SIP may be promoting growth of colon cancer cells by enhancing ubiquitin-mediated degradation of p27kip1. PMID:28196083

Ka-band to L-band frequency down-conversion based on III-V-on-silicon photonic integrated circuits

NASA Astrophysics Data System (ADS)

Van Gasse, K.; Wang, Z.; Uvin, S.; De Deckere, B.; Mariën, J.; Thomassen, L.; Roelkens, G.

2017-12-01

In this work, we present the design, simulation and characterization of a frequency down-converter based on III-V-on-silicon photonic integrated circuit technology. We first demonstrate the concept using commercial discrete components, after which we demonstrate frequency conversion using an integrated mode-locked laser and integrated modulator. In our experiments, five channels in the Ka-band (27.5-30 GHz) with 500 MHz bandwidth are down-converted to the L-band (1.5 GHz). The breadboard demonstration shows a conversion efficiency of - 20 dB and a flat response over the 500 MHz bandwidth. The simulation of a fully integrated circuit indicates that a positive conversion gain can be obtained on a millimeter-sized photonic integrated circuit.

Performance of a Ka-band transponder breadboard for deep-space applications

NASA Technical Reports Server (NTRS)

Mysoor, N. R.; Lane, J. P.; Kayalar, S.; Kermode, A. W.

1995-01-01

This article summarizes the design concepts applied in the development of and advanced Ka-band (34.4 GHz/32 GHz) transponder breadboard for the next generation of space communications systems applications. The selected architecture upgrades the X-band (7.2 GHz/8.4 GHz) deep-space transponder (DST) to provide Da-band up/Ka- and X-band down capability. The Ka-band transponder breadboard incorporates several state-of-the-art components, including sampling mixers, a Ka-band dielectric resonator oscillator, and microwave monolithic integrated circuits (MMICs). The MMICs that were tested in the breadboard include upconverters, downconverters, automatic gain control circuits, mixers, phase modulators, and amplifiers. The measured receiver dynamic range, tracking range, acquisition rate, static phase error, and phase jitter characteristics of the Ka-band breadboard interfaced to the advanced engineering model X-band DST are in good agreement with the expected performance. The results show a receiver tracking threshold of -149 dBm with a dynamic range of 80 dB and a downlink phase jitter of 7 deg rms. The analytical results of phase noise and Allan standard deviation are in good agreement with the experimental results.

AMS radiocarbon dating and varve chronology of Lake Soppensee: 6000 to 12000 14C years BP

NASA Astrophysics Data System (ADS)

Hajdas, Irena; Ivy, Susan D.; Beer, Jürg; Bonani, Georges; Imboden, Dieter; Lotted, André F.; Sturm, Michael; Suter, Martin

1993-12-01

For the extension of the radiocarbon calibration curve beyond 10000 14C y BP, laminated sediment from Lake Soppensee (central Switzerland) was dated. The radiocarbon time scale was obtained using accelerator mass spectrometry (AMS) dating of terrestrial macrofossils selected from the Soppensee sediment. Because of an unlaminated sediment section during the Younger Dryas (10000 11000 14C y BP), the absolute time scale, based on counting annual layers (varves), had to be corrected for missing varves. The Soppensee radiocarbon-verve chronology covers the time period from 6000 to 12000 14C y BP on the radiocarbon time scale and 7000 to 13000 calendar y BP on the absolute time scale. The good agreement with the tree ring curve in the interval from 7000 to 11450 cal y BP (cal y indicates calendar year) proves the annual character of the laminations. The ash layer of the Vasset/Killian Tephra (Massif Central, France) is dated at 8230±140 14C y BP and 9407±44 cal y BP. The boundaries of the Younger Dryas biozone are placed at 10986±69 cal y BP (Younger Dryas/Preboreal) and 1212±86 cal y BP (Alleröd/Younger Dryas) on the absolute time scale. The absolute age of the Laacher See Tephra layer, dated with the radiocarbon method at 10 800 to 11200 14C y BP, is estimated at 12350 ± 135 cal y BP. The oldest radiocarbon age of 14190±120 14C y BP was obtained on macrofossils of pioneer vegetation which were found in the lowermost part of the sediment profile. For the late Glacial, the offset between the radiocarbon (10000 12000 14C y BP) and the absolute time scale (11400 13000 cal y BP) in the Soppensee chronology is not greater than 1000 years, which differs from the trend of the U/Th-radiocarbon curve derived from corals.

Asynchronous marine-terrestrial signals of the last deglacial warming in East Asia associated with low- and high-latitude climate changes.

PubMed

Xu, Deke; Lu, Houyuan; Wu, Naiqin; Liu, Zhenxia; Li, Tiegang; Shen, Caiming; Wang, Luo

2013-06-11

A high-resolution multiproxy record, including pollen, foraminifera, and alkenone paleothermometry, obtained from a single core (DG9603) from the Okinawa Trough, East China Sea (ECS), provided unambiguous evidence for asynchronous climate change between the land and ocean over the past 40 ka. On land, the deglacial stage was characterized by rapid warming, as reflected by paleovegetation, and it began ca. 15 kaBP, consistent with the timing of the last deglacial warming in Greenland. However, sea surface temperature estimates from foraminifera and alkenone paleothermometry increased around 20-19 kaBP, as in the Western Pacific Warm Pool (WPWP). Sea surface temperatures in the Okinawa Trough were influenced mainly by heat transport from the tropical western Pacific Ocean by the Kuroshio Current, but the epicontinental vegetation of the ECS was influenced by atmospheric circulation linked to the northern high-latitude climate. Asynchronous terrestrial and marine signals of the last deglacial warming in East Asia were thus clearly related to ocean currents and atmospheric circulation. We argue that (i) early warming seawater of the WPWP, driven by low-latitude insolation and trade winds, moved northward via the Kuroshio Current and triggered marine warming along the ECS around 20-19 kaBP similar to that in the WPWP, and (ii) an almost complete shutdown of the Atlantic Meridional Overturning Circulation ca. 18-15 kaBP was associated with cold Heinrich stadial-1 and delayed terrestrial warming during the last deglacial warming until ca. 15 kaBP at northern high latitudes, and hence in East Asia. Terrestrial deglacial warming therefore lagged behind marine changes by ca. 3-4 ka.

Late Quaternary glaciation history of monsoon-dominated Dingad basin, central Himalaya, India

NASA Astrophysics Data System (ADS)

Shukla, Tanuj; Mehta, Manish; Jaiswal, Manoj K.; Srivastava, Pradeep; Dobhal, D. P.; Nainwal, H. C.; Singh, Atul K.

2018-02-01

The study presents the Late Quaternary glaciation history of monsoon-dominated Dokriani Glacier valley, Dingad basin, central Himalaya, India. The basin is tested for the mechanism of landforms preservation in high relief and abundant precipitation regimes of the Higher Himalaya. Field geomorphology and remote sensing data, supported by Optical Stimulated Luminescence (OSL) dating enabled identification of five major glacial events of decreasing magnitude. The oldest glacial stage, Dokriani Glacial Stage I (DGS-I), extended down to ∼8 km (2883 m asl) from present-day snout (3965 m asl) followed by other four glaciations events viz. DGS-II, DGS-III, DGS-IV and DGS-V terminating at ∼3211, 3445, 3648 and ∼3733 m asl respectively. The DGS-I glaciation (∼25-∼22 ka BP) occurred during early Marine Isotope Stage (MIS) -2, characterized as Last Glacial Maximum (LGM) extension of the valley. Similarly, DGS-II stage (∼14-∼11 ka BP) represents the global cool and dry Older Dryas and Younger Dryas event glaciation. The DGS-III glaciation (∼8 ka BP) coincides with early Holocene 8.2 ka cooling event, the DGS-IV glaciations (∼4-3.7 ka BP) corresponds to 4.2 ka cool and drier event, DGS-V (∼2.7-∼1 ka BP) represents the cool and moist late Holocene glacial advancement of the valley. This study suggests that the Dokriani Glacier valley responded to the global lowering of temperature and variable precipitation conditions. This study also highlights the close correlation between the monsoon-dominated valley glaciations and Northern Hemisphere cooling events influenced by North Atlantic climate.

Asynchronous marine-terrestrial signals of the last deglacial warming in East Asia associated with low- and high-latitude climate changes

PubMed Central

Xu, Deke; Lu, Houyuan; Wu, Naiqin; Liu, Zhenxia; Li, Tiegang; Shen, Caiming; Wang, Luo

2013-01-01

A high-resolution multiproxy record, including pollen, foraminifera, and alkenone paleothermometry, obtained from a single core (DG9603) from the Okinawa Trough, East China Sea (ECS), provided unambiguous evidence for asynchronous climate change between the land and ocean over the past 40 ka. On land, the deglacial stage was characterized by rapid warming, as reflected by paleovegetation, and it began ca. 15 kaBP, consistent with the timing of the last deglacial warming in Greenland. However, sea surface temperature estimates from foraminifera and alkenone paleothermometry increased around 20–19 kaBP, as in the Western Pacific Warm Pool (WPWP). Sea surface temperatures in the Okinawa Trough were influenced mainly by heat transport from the tropical western Pacific Ocean by the Kuroshio Current, but the epicontinental vegetation of the ECS was influenced by atmospheric circulation linked to the northern high-latitude climate. Asynchronous terrestrial and marine signals of the last deglacial warming in East Asia were thus clearly related to ocean currents and atmospheric circulation. We argue that (i) early warming seawater of the WPWP, driven by low-latitude insolation and trade winds, moved northward via the Kuroshio Current and triggered marine warming along the ECS around 20–19 kaBP similar to that in the WPWP, and (ii) an almost complete shutdown of the Atlantic Meridional Overturning Circulation ca. 18–15 kaBP was associated with cold Heinrich stadial-1 and delayed terrestrial warming during the last deglacial warming until ca. 15 kaBP at northern high latitudes, and hence in East Asia. Terrestrial deglacial warming therefore lagged behind marine changes by ca. 3–4 ka. PMID:23720306

Drosophila Longevity Assurance Conferred by Reduced Insulin Receptor Substrate Chico Partially Requires d4eBP.

PubMed

Bai, Hua; Post, Stephanie; Kang, Ping; Tatar, Marc

2015-01-01

Mutations of the insulin/IGF signaling (IIS) pathway extend Drosophila lifespan. Based on genetic epistasis analyses, this longevity assurance is attributed to downstream effects of the FOXO transcription factor. However, as reported FOXO accounts for only a portion of the observed longevity benefit, suggesting there are additional outputs of IIS to mediate aging. One candidate is target of rapamycin complex 1 (TORC1). Reduced TORC1 activity is reported to slow aging, whereas reduced IIS is reported to repress TORC1 activity. The eukaryotic translation initiation factor 4E binding protein (4E-BP) is repressed by TORC1, and activated 4E-BP is reported to increase Drosophila lifespan. Here we use genetic epistasis analyses to test whether longevity assurance mutants of chico, the Drosophila insulin receptor substrate homolog, require Drosophila d4eBP to slow aging. In chico heterozygotes, which are robustly long-lived, d4eBP is required but not sufficient to slow aging. Remarkably, d4eBP is not required or sufficient for chico homozygotes to extend longevity. Likewise, chico heterozygote females partially require d4eBP to preserve age-dependent locomotion, and both chico genotypes require d4eBP to improve stress-resistance. Reproduction and most measures of growth affected by either chico genotype are always independent of d4eBP. In females, chico heterozygotes paradoxically produce more rather than less phosphorylated 4E-BP (p4E-BP). Altered IRS function within the IIS pathway of Drosophila appears to have partial, conditional capacity to regulate aging through an unconventional interaction with 4E-BP.

Standard Observing Bands: Is Now the Time to Replace S/X with X/Ka?

NASA Technical Reports Server (NTRS)

Jacobs, C. S.; Lanyi, G. E.; Naudet, C. J.

2004-01-01

In this paper we will argue that the VLBI community should be developing a road map to transition from S/X to simultaneous X and Ka-band (32 GHz) observations. There are both negative and positive reasons for planning such a transition. On the negative side, we will outline concerns that S-band observations may be headed toward obsolescence. On the positive side, we will refer to evidence that X/Ka has potential for providing a more stable reference frame than S/X. We will propose timetables for a transition to X/Ka observing starting from the current status of X/Ka and plans that are now taking shape. First X/Ka fringes were obtained in 2001 with the Deep Space Network. Future plans will be discussed including a proposed X/Ka-band upgrade to the VLBA. Lastly, we will consider the need for a period of overlap between S/X and X/Ka so that the long and rich history of astrometric and geodetic VLBI is not compromised.

Reconstructing Holocene shore displacement and Stone Age palaeogeography from a foredune sequence on Ruhnu Island, Gulf of Riga, Baltic Sea

NASA Astrophysics Data System (ADS)

Muru, Merle; Rosentau, Alar; Preusser, Frank; Plado, Jüri; Sibul, Ivo; Jõeleht, Argo; Bjursäter, Stefan; Aunap, Raivo; Kriiska, Aivar

2018-02-01

Holocene shore displacement and the palaeogeography of Late Mesolithic and Late Neolithic settlements on Ruhnu Island, Gulf of Riga, were reconstructed using foredune sequence luminescence dating, sedimentological data supported by ground-penetrating radar analysis, and GIS-based landscape modelling. The foredune ridges consist of very well to well sorted fine- to medium-grained aeolian sand and are underlain by seaward dipping foreshore sediments. The studied sequence of 38 ridges was formed between 6.91 ± 0.58 ka and 2.54 ± 0.19 ka ago, and represents a period of falling relative sea level. Foredune plain progradation, with average rates of 0.3-0.6 m per year, was controlled by isostatic land uplift, which caused a continuous withdrawal of shorelines to lower elevations. The dated foredune succession was used to reconstruct the coastal palaeogeography of the island. Palaeogeographical reconstructions show that during two phases of Late Mesolithic habitation, at ca. 7.2 cal. ka BP and 6.2 cal. ka BP, seal hunters settled the coastal zone of Ruhnu Island. Based on tool material and pottery type they could have originated from Saaremaa Island, which according to palaeoreconstruction of the Gulf of Riga, was located approximately 70 km northwest of Ruhnu Island during the Late Mesolithic. Later signs of human occupation, radiocarbon dated to ca. 4.7 cal. ka BP, were from the centre of the island, hundreds of metres away from the shore at about 8 m above its contemporary sea level. This Late Neolithic habitation shows a clearly different pattern than earlier coastal settlement, and suggests a shift in subsistence strategy towards agriculture and animal husbandry.

BP Spill Sampling and Monitoring Data

EPA Pesticide Factsheets

This dataset analyzes waste from the the British Petroleum Deepwater Horizon Rig Explosion Emergency Response, providing opportunity to query data sets by metadata criteria and find resulting raw datasets in CSV format.The data query tool allows users to download EPA's air, water and sediment sampling and monitoring data that has been collected in response to the BP oil spill. All sampling and monitoring data that has been collected to date is available for download as raw structured data.The query tools enables CSV file creation to be refined based on the following search criteria: date range (between April 28, 2010 and 9/29/2010); location by zip, city, or county; media (solid waste, weathered oil, air, surface water, liquid waste, tar, sediment, water); substance categories (based on media selection) and substances (based on substance category selection).

Food safety assessment of Cry8Ka5 mutant protein using Cry1Ac as a control Bt protein.

PubMed

Farias, Davi Felipe; Viana, Martônio Ponte; Oliveira, Gustavo Ramos; Santos, Vanessa Olinto; Pinto, Clidia Eduarda Moreira; Viana, Daniel Araújo; Vasconcelos, Ilka Maria; Grossi-de-Sa, Maria Fátima; Carvalho, Ana Fontenele Urano

2015-07-01

Cry8Ka5 is a mutant protein from Bacillus thuringiensis (Bt) that has been proposed for developing transgenic plants due to promising activity against coleopterans, like Anthonomus grandis (the major pest of Brazilian cotton culture). Thus, an early food safety assessment of Cry8Ka5 protein could provide valuable information to support its use as a harmless biotechnological tool. This study aimed to evaluate the food safety of Cry8Ka5 protein following the two-tiered approach, based on weights of evidence, proposed by ILSI. Cry1Ac protein was used as a control Bt protein. The history of safe use revealed no convincing hazard reports for Bt pesticides and three-domain Cry proteins. The bioinformatics analysis with the primary amino acids sequence of Cry8Ka5 showed no similarity to any known toxic, antinutritional or allergenic proteins. The mode of action of Cry proteins is well understood and their fine specificity is restricted to insects. Cry8Ka5 and Cry1Ac proteins were rapidly degraded in simulated gastric fluid, but were resistant to simulated intestinal fluid and heat treatment. The LD50 for Cry8Ka5 and Cry1Ac was >5000 mg/kg body weight when administered by gavage in mice. Thus, no expected relevant risks are associated with the consumption of Cry8Ka5 protein. Copyright © 2015 Elsevier Ltd. All rights reserved.

Coupled molecular dynamics and continuum electrostatic method to compute the ionization pKa's of proteins as a function of pH. Test on a large set of proteins.

PubMed

Vorobjev, Yury N; Scheraga, Harold A; Vila, Jorge A

2018-02-01

A computational method, to predict the pKa values of the ionizable residues Asp, Glu, His, Tyr, and Lys of proteins, is presented here. Calculation of the electrostatic free-energy of the proteins is based on an efficient version of a continuum dielectric electrostatic model. The conformational flexibility of the protein is taken into account by carrying out molecular dynamics simulations of 10 ns in implicit water. The accuracy of the proposed method of calculation of pKa values is estimated from a test set of experimental pKa data for 297 ionizable residues from 34 proteins. The pKa-prediction test shows that, on average, 57, 86, and 95% of all predictions have an error lower than 0.5, 1.0, and 1.5 pKa units, respectively. This work contributes to our general understanding of the importance of protein flexibility for an accurate computation of pKa, providing critical insight about the significance of the multiple neutral states of acid and histidine residues for pKa-prediction, and may spur significant progress in our effort to develop a fast and accurate electrostatic-based method for pKa-predictions of proteins as a function of pH.

76 FR 69712 - Application To Export Electric Energy; BP Energy Company

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-09

... DEPARTMENT OF ENERGY [OE Docket No. EA-315-A] Application To Export Electric Energy; BP Energy.... SUMMARY: BP Energy Company (BP Energy) has applied to renew its authority to transmit electric energy from... BP Energy to transmit electric energy from the United States to Canada as a power marketer for a five...

Testing the Reconstruction Potential for North Pacific Circulation Anomalies inside the TraCE-21ka Paleoclimate Simulation

NASA Astrophysics Data System (ADS)

Elison Timm, O.; Flamholtz, W. M.; Li, S.; Massa, C.; Beilman, D. W.

2016-12-01

The motivation for this study was sparked by the idea that paleoclimate temperature and precipitation proxies provide sufficient information to make inferences about extratropical atmospheric circulation changes over the North Pacific during the Holocene. Typical targets for the circulation reconstruction problem include the strength and position of the Aleutian Low and the storm tracks. The reconstruction problem was investigated under idealized conditions using model simulation results from the TraCE-21ka transient climate simulation (http://www.cgd.ucar.edu/ccr/TraCE/), which covers the Last Glacial Maximum to present. It is demonstrated that modes of variability found on interannual to multidecadal timescales during the preindustrial era provide inadequate pattern for reconstructing long-term mean changes during the past 22,000 years. Our circulation reconstruction target was the geopotential height field at 500hPa (Z500) over the North Pacific Ocean during winter. We applied a field reconstruction method using Maximum Covariance Analysis (MCA). The MCA was applied to Z500 and surface temperatures as predictor information. The MCA was given model data containing interannual to multidecadal variability from the pre-industrial climate (1000BP-900BP). We worked with ten leading MCA modes in the reconstruction, which can reproduce about 90% of the covariability during the preindustrial period. Within the model simulation, we validated the field reconstructions against the model's circulation states over the last 22,000 years. Spatial skill scores show that the reconstruction skill drops significantly prior to the late Holocene. Reasons for the loss of reconstruction skill are due to the fact that externally forced climate changes do not resemble the internal modes of variability and that covariance between circulation and temperatures on interannual-multidecadal time scales changes with the background climate state. However, the reconstruction can be improved by

Weak acid-concentration Atot and dissociation constant Ka of plasma proteins in racehorses.

PubMed

Stampfli, H R; Misiaszek, S; Lumsden, J H; Carlson, G P; Heigenhauser, G J

1999-07-01

The plasma proteins are a significant contributor to the total weak acid concentration as a net anionic charge. Due to potential species difference, species-specific values must be confirmed for the weak acid anionic concentrations of proteins (Atot) and the effective dissociation constant for plasma weak acids (Ka). We studied the net anion load Atot of equine plasma protein in 10 clinically healthy mature Standardbred horses. A multi-step titration procedure, using a tonometer covering a titration range of PCO2 from 25 to 145 mmHg at 37 degrees C, was applied on the plasma of these 10 horses. Blood gases (pH, PCO2) and electrolytes required to calculate the strong ion difference ([SID] = [(Na(+) + K(+) + Ca(2+) + Mg(2+))-(Cl(-) + Lac(-) + PO4(2-))]) were simultaneously measured over a physiological pH range from 6.90-7.55. A nonlinear regression iteration to determine Atot and Ka was performed using polygonal regression curve fitting applied to the electrical neutrality equation of the physico-chemical system. The average anion-load Atot for plasma protein of 10 Standardbred horses was 14.89 +/- 0.8 mEq/l plasma and Ka was 2.11 +/- 0.50 x 10(-7) Eq/l (pKa = 6.67). The derived conversion factor (iterated Atot concentration/average plasma protein concentration) for calculation of Atot in plasma is 0.21 mEq/g protein (protein-unit: g/l). This value compares closely with the 0.24 mEq/g protein determined by titration of Van Slyke et al. (1928) and 0.22 mEq/g protein recently published by Constable (1997) for horse plasma. The Ka value compares closely with the value experimentally determined by Constable in 1997 (2.22 x 10(7) Eq/l). Linear regression of a set of experimental data from 5 Thoroughbred horses on a treadmill exercise test, showed excellent correlation with the regression lines not different from identity for the calculated and measured variables pH, HCO3 and SID. Knowledge of Atot and Ka for the horse is useful especially in exercise studies and in

X/Ka Celestial Frame Improvements: Vision to Reality

NASA Technical Reports Server (NTRS)

Jacobs, C. S.; Bagri, D. S.; Britcliffe, M. J.; Clark, J. E.; Franco, M. M.; Garcia-Miro, C.; Goodhart, C. E.; Horiuchi, S.; Lowe, S. T.; Moll, V. E.;

Abrupt hydroclimate disruption across the Australian arid zone 50 ka coincident with human colonization

NASA Astrophysics Data System (ADS)

Miller, G. H.; Fogel, M. L.; Magee, J. W.; Gagan, M. K.

2016-12-01

Although many studies focus on how climate change impacted ancient societies, in Australia a growing body of evidence indicates that activities of the earliest human colonizers in turn altered the Australian climate. We utilize the stable isotopes of carbon and oxygen preserved in near-continuous 100 ka time series of avian eggshell from five regions across the Australian arid zone to reconstruct ecosystem status (d13C) and effective moisture (d18O). Training sets of sub-modern samples provide the basis for the reconstructions. Together, d13C and d18O provide independent estimates of ecosystem status and climate over the past 100 ka from the same dated sample, reducing correlation uncertainties between proxies. Changes in eggshell d13C document a dramatic reduction of palatable summer-wet C4 grasses in all regions between 50 and 45 ka, that has persisted through to modern times. Continuous 100 ka records of effective moisture derived from eggshell d18O show moist conditions from 100 to 60 ka, with variable drying after 60 ka, but the strong shift toward greatest aridity is coincident with the onset of the last glacial maximum 30 ka ago, 15 ka after the observed ecosystem restructuring. Combining the d13C and d18O time-series shows that an abrupt and permanent restructuring of the moisture/ecosystem balance occurred between 50 and 45 ka. Additional studies show that most large monsoon-fed inland arid-zone lakes carried permanent water at least intermittently between 120 and 50 ka, but never experienced permanent deep-water status after 45 ka, despite a wide range of global climate states, including the early Holocene when most other monsoon systems were reinvigorated. The lack of exceptional climate shifts either locally or globally between 60 and 40 ka eliminates climate as the cause of the ecosystem restructuring and persistent lake desiccation. Collectively these data suggest the wave of human colonization across Australia in altered land surface characteristics

A 130 ka reconstruction of rainfall on the Bolivian Altiplano

NASA Astrophysics Data System (ADS)

Placzek, C. J.; Quade, J.; Patchett, P. J.

2013-02-01

New efforts to link climate reconstructions from shoreline deposits and sediment cores yield an improved and more detailed lake history from the Bolivian Altiplano. On the Southern Altiplano, 10 lake oscillations have been identified from this new unified chronology, each coincident with North Atlantic cold events such as Heinrich Events H5, H2, H1, and the Younger Dryas. By coupling this new lake history to a hydrologic budget model we are able to evaluate precipitation variability on the Southern Bolivian Altiplano over the last 130 ka. These modeling efforts underscore the relative aridity of the Altiplano during the rare and small lake cycles occurring between 80 and 20 ka, when colder temperatures combined with little or no change in rainfall produced smaller paleolakes. Relative aridity between 80 and 20 ka contrasts with the immense Tauca lake cycle (18.1-14.1 ka), which was six times larger than modern Lake Titicaca and coincided with Heinrich Event 1. This improved paleolake record from the Southern Altiplano reveals a strong link between central Andean climate and Atlantic sea-surface temperature gradients during the late Pleistocene, even though today rainfall variability is driven mostly by Pacific sea-surface temperature anomalies associated with El Niño/Southern Oscillation. However, not all Heinrich Events appear to result in lake expansions, most conspicuously during the global cold interval between 80 and 20 ka when the Altiplano and Amazon Basin were relatively arid.

The biogeophysical climatic impacts of anthropogenic land use change during the Holocene

NASA Astrophysics Data System (ADS)

Smith, M. Clare; Singarayer, Joy S.; Valdes, Paul J.; Kaplan, Jed O.; Branch, Nicholas P.

2016-04-01

The first agricultural societies were established around 10 ka BP and had spread across much of Europe and southern Asia by 5.5 ka BP with resultant anthropogenic deforestation for crop and pasture land. Various studies (e.g. Joos et al., 2004; Kaplan et al., 2011; Mitchell et al., 2013) have attempted to assess the biogeochemical implications for Holocene climate in terms of increased carbon dioxide and methane emissions. However, less work has been done to examine the biogeophysical impacts of this early land use change. In this study, global climate model simulations with Hadley Centre Coupled Model version 3 (HadCM3) were used to examine the biogeophysical effects of Holocene land cover change on climate, both globally and regionally, from the early Holocene (8 ka BP) to the early industrial era (1850 CE). Two experiments were performed with alternative descriptions of past vegetation: (i) one in which potential natural vegetation was simulated by Top-down Representation of Interactive Foliage and Flora Including Dynamics (TRIFFID) but without land use changes and (ii) one where the anthropogenic land use model Kaplan and Krumhardt 2010 (KK10; Kaplan et al., 2009, 2011) was used to set the HadCM3 crop regions. Snapshot simulations were run at 1000-year intervals to examine when the first signature of anthropogenic climate change can be detected both regionally, in the areas of land use change, and globally. Results from our model simulations indicate that in regions of early land disturbance such as Europe and south-east Asia detectable temperature changes, outside the normal range of variability, are encountered in the model as early as 7 ka BP in the June-July-August (JJA) season and throughout the entire annual cycle by 2-3 ka BP. Areas outside the regions of land disturbance are also affected, with virtually the whole globe experiencing significant temperature changes (predominantly cooling) by the early industrial period. The global annual mean temperature

BP5 monolayer with multiferroicity and negative Poisson’s ratio: a prediction by global optimization method

NASA Astrophysics Data System (ADS)

Wang, Haidi; Li, Xingxing; Sun, Jiuyu; Liu, Zhao; Yang, Jinlong

2017-12-01

Based on global optimization Cuttlefish algorithm, we predict a stable two-dimensional (2D) phase of boron phosphide with 1:5 stoichiometry, i.e. boron pentaphosphide (BP5) monolayer, which has a lower formation energy than that of the commonly believed graphitic phase (g-BP). BP5 monolayer is a multiferroic material with coupled ferroelasticity and ferroelectricity. The predicted reversible strain is up to 41.41%, which is the largest one among all reported ferroelastic materials. Due to the non-centrosymmetric structure and electronegativity differences between boron and phosphorus atoms, an in-plane spontaneous polarization of 1.63  ×  10-10 C m-1 occurs in BP5. Moreover, the recently hunted negative Poisson’s ratio property, is also observed in BP5. As an indirect semiconductor with a band gap of 1.34 eV, BP5 displays outstanding optical and electronic properties, for instance strongly anisotropic visible-light absorption and high carrier mobility. Finally, we demonstrate that AlN (0 1 0) surface could be a suitable substrate for epitaxy growth of BP5 monolayer. Due to the rich and extraordinary properties of BP5, it’s considered to be a potential nanomaterial for designing electromechanical or optoelectronic devices, such as nonvolatile memory with conveniently readable/writeable capability.

Drastic lake level changes of Lake Van (eastern Turkey) during the past ca. 600 ka: climatic, volcanic and tectonic control

NASA Astrophysics Data System (ADS)

Cukur, D.; Krastel, S.; Schmincke, H.; Sumita, M.; Tomonaga, Y.; Damci, E.

2013-12-01

Lake Van is the largest soda lake in the world with a present surface of 3,574 km2 and a maximum water depth of 450 m. Sedimentary deposits in the lake preserve one of the most complete record of continental climate in the Middle East since the Middle Pleistocene. We studied these deposits to characterize the evolution of the lake level and its possible relationships with changes in climate, volcanic, and regional tectonics since the formation of the lake ca. 600 ka ago. Changes in lake level were determined based on high-resolution seismic reflection profiles showing erosional surfaces, changes in stratal geometries such as downward shifts in coastal onlap, and recognition of distinctive stratigraphic features such as prograding delta clinoforms. Our results show that Lake Van has undergone drastic changes in surface elevation by as much as 600 meters over the past ca. 600 ka. Five major lowstands occurred at ca. ~600 ka, ca. 365-340 ka, ca 290-230 ka; ca. 150-130 ka; and ca. 30-14 ka. During a first period (A) (ca. 600-ca 230 ka) lake levels changed drastically by hundreds of m but at longer time intervals between low and high stands. Changes occurred more frequently but mostly by a few tens of m during the past ca. 230 ka years where we can distinguish a first period (B1) of stepwise transgressions between ca. 230 and 150 ka followed by a short regression between ca. 150 and 130 ka. Lake level rose stepwise again during period B2 lasting until ca 30 ka. During the past 30 ka a regression and a final transgression each lasted ca. 15 ka years. The major lowstand periods in Lake Van occurred during glacial periods, arguing for a climatic control of these lake-level fluctuations (i.e., significantly reduced precipitation leading to lake level low stands). Although climate forcing may have been the dominant cause for the drastic lake level changes of Lake Van, volcanic and tectonic forcing factors are also invoked. For example, the number of distinct tephra layers

Pedo-sedimentary constituents as paleoenvironmental proxies in the Sudano-Sahelian belt during the Late Quaternary (southwestern Chad Basin)

NASA Astrophysics Data System (ADS)

Diaz, Nathalie; Dietrich, Fabienne; Sebag, David; King, Georgina E.; Valla, Pierre G.; Durand, Alain; Garcin, Yannick; de Saulieu, Geoffroy; Deschamps, Pierre; Herman, Frédéric; Verrecchia, Eric P.

2018-07-01

Climate and environmental changes since the Last Glacial Maximum in the tropical zone of West Africa are usually inferred from marine and continental records. In this study, the potential of carbonate pedo-sedimentary geosystems, i.e. Vertisol relics, to record paleoenvironmental changes in the southwestern part of Chad Basin are investigated. A multi-dating approach was applied on different pedogenic organo-mineral constituents. Optically stimulated luminescence (OSL) dating was performed on the soil K-rich feldspars and was combined with radiocarbon dating on both the inorganic (14Cinorg) and organic carbon (14Corg) soil fractions. Three main pedo-sedimentary processes were assessed over the last 20 ka BP: 1) the soil parent material deposition, from 18 ka to 12 ka BP (OSL), 2) the soil organic matter integration, from 11 cal ka to 8 cal ka BP (14Corg), and 3) the pedogenic carbonate nodule precipitation, from 7 cal ka to 5 cal ka BP (14Cinorg). These processes correlate well with the Chad Basin stratigraphy and West African records and are shown to be related to significant changes in the soil water balance responding to the evolution of continental hydrology during the Late Quaternary. The last phase affecting the Vertisol relics is the increase of erosion, which is hypothesized to be due to a decrease of the vegetation cover triggered by (i) the onset of drier conditions, possibly strengthened by (ii) anthropogenic pressure. Archaeological data from Far North Cameroon and northern Nigeria, as well as sedimentation times in Lake Tilla (northeastern Nigeria), were used to test these relationships. The increase of erosion is suggested to possibly occur between c. 3 cal ka and 1 cal ka BP. Finally, satellite images revealed similar geosystems all along the Sudano-Sahelian belt, and initial 14Cinorg ages of the samples collected in four sites gave similar ages to those reported in this study. Consequently, the carbonate pedo-sedimentary geosystems are valuable

DelPhiPKa web server: predicting pKa of proteins, RNAs and DNAs.

PubMed

Wang, Lin; Zhang, Min; Alexov, Emil

2016-02-15

A new pKa prediction web server is released, which implements DelPhi Gaussian dielectric function to calculate electrostatic potentials generated by charges of biomolecules. Topology parameters are extended to include atomic information of nucleotides of RNA and DNA, which extends the capability of pKa calculations beyond proteins. The web server allows the end-user to protonate the biomolecule at particular pH based on calculated pKa values and provides the downloadable file in PQR format. Several tests are performed to benchmark the accuracy and speed of the protocol. The web server follows a client-server architecture built on PHP and HTML and utilizes DelPhiPKa program. The computation is performed on the Palmetto supercomputer cluster and results/download links are given back to the end-user via http protocol. The web server takes advantage of MPI parallel implementation in DelPhiPKa and can run a single job on up to 24 CPUs. The DelPhiPKa web server is available at http://compbio.clemson.edu/pka_webserver. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

4E-BP1 regulates the differentiation of white adipose tissue.

PubMed

Tsukiyama-Kohara, Kyoko; Katsume, Asao; Kimura, Kazuhiro; Saito, Masayuki; Kohara, Michinori

2013-07-01

4E Binding protein 1 (4E-BP1) suppresses translation initiation. The absence of 4E-BP1 drastically reduces the amount of adipose tissue in mice. To address the role of 4E-BP1 in adipocyte differentiation, we characterized 4E-BP1(-/-) mice in this study. The lack of 4E-BP1 decreased the amount of white adipose tissue and increased the amount of brown adipose tissue. In 4E-BP1(-/-) MEF cells, PPARγ coactivator 1 alpha (PGC-1α) expression increased and exogenous 4E-BP1 expression suppressed PGC-1α expression. The level of 4E-BP1 expression was higher in white adipocytes than in brown adipocytes and showed significantly greater up-regulation in white adipocytes than in brown adipocytes during preadipocyte differentiation into mature adipocytes. The amount of PGC-1α was consistently higher in HB cells (a brown preadipocyte cell line) than in HW cells (a white preadipocyte cell line) during differentiation. Moreover, the ectopic over-expression of 4E-BP1 suppressed PGC-1α expression in white adipocytes, but not in brown adipocytes. Thus, the results of our study indicate that 4E-BP1 may suppress brown adipocyte differentiation and PGC-1α expression in white adipose tissues. © 2013 The Authors Genes to Cells © 2013 by the Molecular Biology Society of Japan and Wiley Publishing Asia Pty Ltd.

Preliminary paleomagnetic and rock magnetic results from 17 to 22 ka sediment of Jeju Island, Korea: Geomagnetic excursional behavior or rock magnetic anomalies?

NASA Astrophysics Data System (ADS)

Ahn, Hyeon-Seon; Sohn, Young Kwan; Lee, Jin-Young; Kim, Jin Cheul

2018-05-01

Paleomagnetic and rock magnetic investigations were performed on a 64-cm-thick section of nonmarine unconsolidated muddy sediment from the Gosan Formation on Jeju Island, Korea. This sediment was recently dated to have been deposited between 22 and 17 kyr BP calibrated, with a sedimentation rate of 13-25 cm/kyr, based on many radiocarbon ages. Interestingly, stepwise alternating field (AF) demagnetization revealed characteristic natural remanent magnetizations with anomalous directions, manifested by marked deviations from the direction of today's axial dipole field, for some separate depth levels. On the other hand, stepwise thermal (TH) demagnetization showed more complex behavior, resulting in the identification of multiple remanence components. For all TH-treated specimens, consistently two different components are predominant: a low-temperature component unblocked below 240-320 °C entirely having normal-polarity apparently within the secular variation range of the Brunhes Chron, and a high-temperature component with unblocking temperatures (Tubs) between 240-320 and 520-580 °C that have anomalous directions, concentrated in the 13-34-cm-depth interval ( 17-19 ka in inferred age) and possibly below 53 cm depth (before 20 ka). Rock magnetic results also infer the dominance of low-coercivity magnetic particles having 300 and 580 °C Curie temperature as remanence carriers, suggestive of (titano)maghemite and/or Ti-rich titanomagnetite and magnetite (or Ti-poor titanomagnetite), respectively. A noteworthy finding is that AF demagnetizations in this study often lead to incomplete separation of the two remanence components possibly due to their strongly overlapping AF spectra. The unusual directions do not appear to result from self-reversal remanences. Then, one interpretation is that the low-temperature components are attributable to post-depositional chemical remanences, associated possibly with the later formation of the mineral phase having Tub 300 �

The Sustainable Development Assessment of Reservoir Resettlement Based on a BP Neural Network.

PubMed

Huang, Li; Huang, Jian; Wang, Wei

2018-01-18

Resettlement affects not only the resettlers' production activities and life but also, directly or indirectly, the normal operation of power stations, the sustainable development of the resettlers, and regional social stability. Therefore, a scientific evaluation index system for the sustainable development of reservoir resettlement must be established that fits Chinese national conditions and not only promotes reservoir resettlement research but also improves resettlement practice. This essay builds an evaluation index system for resettlers' sustainable development based on a back-propagation (BP) neural network, which can be adopted in China, taking the resettlement necessitated by step hydropower stations along the Wujiang River cascade as an example. The assessment results show that the resettlement caused by step power stations along the Wujiang River is sustainable, and this evaluation supports the conclusion that national policies and regulations, which are undergoing constant improvement, and resettlement has increasingly improved. The results provide a reference for hydropower reservoir resettlement in developing countries.

The Sustainable Development Assessment of Reservoir Resettlement Based on a BP Neural Network

PubMed Central

Huang, Li; Huang, Jian

2018-01-01

Resettlement affects not only the resettlers’ production activities and life but also, directly or indirectly, the normal operation of power stations, the sustainable development of the resettlers, and regional social stability. Therefore, a scientific evaluation index system for the sustainable development of reservoir resettlement must be established that fits Chinese national conditions and not only promotes reservoir resettlement research but also improves resettlement practice. This essay builds an evaluation index system for resettlers’ sustainable development based on a back-propagation (BP) neural network, which can be adopted in China, taking the resettlement necessitated by step hydropower stations along the Wujiang River cascade as an example. The assessment results show that the resettlement caused by step power stations along the Wujiang River is sustainable, and this evaluation supports the conclusion that national policies and regulations, which are undergoing constant improvement, and resettlement has increasingly improved. The results provide a reference for hydropower reservoir resettlement in developing countries. PMID:29346305

A 20-15 ka high-resolution paleomagnetic secular variation record from Black Sea sediments - no evidence for the 'Hilina Pali excursion'?

NASA Astrophysics Data System (ADS)

Liu, Jiabo; Nowaczyk, Norbert R.; Frank, Ute; Arz, Helge W.

2018-06-01

A comprehensive magnetostratigraphic investigation on sixteen sediment cores from the southeastern Black Sea yielded a very detailed high-quality paleosecular variation (PSV) record spanning from 20 to 15 ka. The age models are based on radiocarbon dating, stratigraphic correlation, and tephrochronology. Further age constraints were obtained by correlating four meltwater events, described from the western Black Sea, ranging in age from about 17 to 15 ka, with maxima in K/Ti ratios, obtained from X-ray fluorescence (XRF) scanning, and minima in S-ratios, reflecting increased hematite content, in the studied cores. Since the sedimentation rates in the investigated time window are up to 50 cm ka-1, the obtained PSVs records enabled a stacking using 50-yr bins. A directional anomaly at 18.5 ka, associated with pronounced swings in inclination and declination, as well as a low in relative paleointensity (rPI), is probably contemporaneous with the Hilina Pali excursion, originally reported from Hawaiian lava flows. However, virtual geomagnetic poles (VGPs) calculated from Black Sea sediments are not located at latitudes lower than 60°N, which denotes normal, though pronounced secular variations. During the postulated Hilina Pali excursion, the VGPs calculated from Black Sea data migrated clockwise only along the coasts of the Arctic Ocean from NE Canada (20.0 ka), via Alaska (18.6 ka) and NE Siberia (18.0 ka) to Svalbard (17.0 ka), then looping clockwise through the Eastern Arctic Ocean.

Deepwater BP Oil Spill Natural Resource Damage Assessment Update | NOAA

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Publications Press Releases Story Archive Home Deepwater BP Oil Spill Natural Resource Damage Assessment Update Deepwater BP Oil Spill Natural Resource Damage Assessment Update share Posted on July 7, 2011 | Assessment and Early Restoration Restoration Area Title: Deepwater BP Oil Spill Natural Resource Damage

Environmental Change recorded in Lacustrine Sediments from Tangra Yumco, Tibetan Plateau, at 16.5 ka cal BP and during the Younger Dryas Chronozone

NASA Astrophysics Data System (ADS)

Henkel, K.; Ahlborn, M.; Haberzettl, T.; Kasper, T.; Daut, G.; Ju, J.; Ma, Q.; Wang, J.; Zhu, L.; Maeusbacher, R.

2013-12-01

In the purpose of understanding the recent climate change on the Tibetan Plateau (TP) and beyond and to allow predictions for future climate scenarios it is imperative to investigate past climate changes. The numerous lake systems on the TP serve as ideal archives for past hydrological changes, which are assumed to be caused by variations in strength and extent of monsoonal air masses. By now, the spatial and temporal monsoonal evolution on the TP is intensively discussed. With the focus on a W-E lake transect on the southern TP we investigate lakes with a multi-dating and multi-proxy analyses approach, which has already been successfully carried out on Nam Co, the easternmost lake of the transect. In this study, we present results from a ~11.5 m long lacustrine sediment record from the terminal lake Tangra Yumco (4,540 m a.s.l., 31°13'N, 86°43'E), representing the center of the transect. Tangra Yumco is the deepest lake recorded on the TP so far. Via a hydro-acoustic survey observed submerged beach berms (45 m below recent lake level) and exposed lake level terraces up to ~205 m above lake level indicate large lake level fluctuations in the past. The record consists of an interbedding of fine grained silty sediments with a lamination of different thicknesses (sub-mm to cm) and partly intercalated blackish sandy layers. Homogeneous areas, which occur especially in the upper two thirds of the profile, represent turbidite deposits. Until now, color- and greyscale-, magnetic susceptibility- and XRF-scanning were applied. For age control 22 14C AMS-radiocarbon measurements were carried out on bulk organic matter. To determine a possible carbon reservoir effect, additional surface sediment samples were measured as well as one modern aquatic plant. The results indicate a reservoir effect of ~2,120 +110/-90 years. Assuming a constant reservoir effect, the base of the record reveals a corrected radiocarbon age of 17,270 +325/-310 cal BP. The sediment accumulation rate is

Validation Studies for CHRISTINE-CC Using a Ka-Band Coupled-Cavity TWT

DTIC Science & Technology

2006-04-01

Cavity TWT for 29-31 GHz Figure 3: Output power vs. input power at f=30.0 Communications Systems," I Ith Ka and Broadband GHz for the VTA-6430A1 Ka...Coupled-Cavity TWT DISTRIBUTION: Approved for public release, distribution unlimited This paper is part of the following report: TITLE: 2006 IEEE...Studies for CHRISTINE-CC Using a Ka-Band Coupled-Cavity TWT * D. Chernin, D. Dialetis, T. M. Antonsen, Jr.t, Science Applications International Corp McLean

A multi-proxy approach to understanding complex responses of salt-lake catchments to climate variability and human pressure: A Late Quaternary case study from south-eastern, Spain

NASA Astrophysics Data System (ADS)

Jones, Samantha Elsie; Burjachs, Francesc; Ferrer-García, Carlos; Giralt, Santiago; Schulte, Lothar; Fernández-López de Pablo, Javier

2018-03-01

This article focuses on a former salt lake in the upper Vinalopó Valley in south-eastern Spain. The study spans the Late Pleistocene through to the Late Holocene, although with particular focus on the period between 11 ka cal BP and 3000 ka cal BP (which spans the Mesolithic and part of the Bronze Age). High resolution multi-proxy analysis (including pollen, non pollen palynomorphs, grain size, X-ray fluorescence and X-ray diffraction) was undertaken on the lake sediments. The results show strong sensitivity to both long term and small changes in the evaporation/precipitation ratio, affecting the surrounding vegetation composition, lake-biota and sediment geochemistry. To summarise the key findings the main general trends identified include: 1) Hyper-saline conditions and low lake levels at the end of the Late Glacial 2) Increasing wetness and temperatures which witnessed an expansion of mesophilic woodland taxa, lake infilling and the establishment of a more perennial lake system at the onset of the Holocene 3) An increase in solar insolation after 9 ka cal BP which saw the re-establishment of pine forests 4) A continued trend towards increasing dryness (climatic optimum) at 7 ka cal BP but with continued freshwater input 5) An increase in sclerophyllous open woody vegetation (anthropogenic?), and increasing wetness (climatic?) is represented in the lake record between 5.9 and 3 ka cal BP 6) The Holocene was also punctuated by several aridity pulses, the most prominent corresponding to the 8.2 ka cal BP event. These events, despite a paucity of well dated archaeological sites in the surrounding area, likely altered the carrying capacity of this area both regionally and locally, particularly during the Mesolithic-Neolithic transition, in terms of fresh water supply for human/animal consumption, wild plant food reserves and suitable land for crop growth.

The potential role of CacyBP/SIP in tumorigenesis.

PubMed

Ning, Xiaoxuan; Chen, Yang; Wang, Xiaosu; Li, Qiaoneng; Sun, Shiren

2016-08-01

Calcyclin-binding protein/Siah-1-interacting protein (CacyBP/SIP) was initially described as a binding partner of S100A6 in the Ehrlich ascites tumor cells and later as a Siah-1-interacting protein. This 30 kDa protein includes three domains and is involved in cell proliferation, differentiation, cytoskeletal rearrangement, and transcriptional regulation via binding to various proteins. Studies have also shown that the CacyBP/SIP is a critical protein in tumorigenesis. But, its promotion or suppression of cancer progression may depend on the cell type. In this review, the biological characteristics and target proteins of CacyBP/SIP have been described. Moreover, the exact role of CacyBP/SIP in various cancers is discussed.

E258K HCM-causing mutation in cardiac MyBP-C reduces contractile force and accelerates twitch kinetics by disrupting the cMyBP-C and myosin S2 interaction.

PubMed

De Lange, Willem J; Grimes, Adrian C; Hegge, Laura F; Spring, Alexander M; Brost, Taylor M; Ralphe, J Carter

2013-09-01

Mutations in cardiac myosin binding protein C (cMyBP-C) are prevalent causes of hypertrophic cardiomyopathy (HCM). Although HCM-causing truncation mutations in cMyBP-C are well studied, the growing number of disease-related cMyBP-C missense mutations remain poorly understood. Our objective was to define the primary contractile effect and molecular disease mechanisms of the prevalent cMyBP-C E258K HCM-causing mutation in nonremodeled murine engineered cardiac tissue (mECT). Wild-type and human E258K cMyBP-C were expressed in mECT lacking endogenous mouse cMyBP-C through adenoviral-mediated gene transfer. Expression of E258K cMyBP-C did not affect cardiac cell survival and was appropriately incorporated into the cardiac sarcomere. Functionally, expression of E258K cMyBP-C caused accelerated contractile kinetics and severely compromised twitch force amplitude in mECT. Yeast two-hybrid analysis revealed that E258K cMyBP-C abolished interaction between the N terminal of cMyBP-C and myosin heavy chain sub-fragment 2 (S2). Furthermore, this mutation increased the affinity between the N terminal of cMyBP-C and actin. Assessment of phosphorylation of three serine residues in cMyBP-C showed that aberrant phosphorylation of cMyBP-C is unlikely to be responsible for altering these interactions. We show that the E258K mutation in cMyBP-C abolishes interaction between N-terminal cMyBP-C and myosin S2 by directly disrupting the cMyBP-C-S2 interface, independent of cMyBP-C phosphorylation. Similar to cMyBP-C ablation or phosphorylation, abolition of this inhibitory interaction accelerates contractile kinetics. Additionally, the E258K mutation impaired force production of mECT, which suggests that in addition to the loss of physiological function, this mutation disrupts contractility possibly by tethering the thick and thin filament or acting as an internal load.

Early retreat of the Alaska Peninsula Glacier Complex and the implications for coastal migrations of First Americans

USGS Publications Warehouse

Misarti, Nicole; Finney, Bruce P.; Jordan, James W.; Maschner, Herbert D. G.; Addison, Jason A.; Shapley, Mark D.; Krumhardt, Andrea P.; Beget, James E.

2012-01-01

The debate over a coastal migration route for the First Americans revolves around two major points: seafaring technology, and a viable landscape and resource base. Three lake cores from Sanak Island in the western Gulf of Alaska yield the first radiocarbon ages from the continental shelf of the Northeast Pacific and record deglaciation nearly 17 ka BP (thousands of calendar years ago), much earlier than previous estimates based on extrapolated data from other sites outside the coastal corridor in the Gulf of Alaska. Pollen data suggest an arid, terrestrial ecosystem by 16.3 ka BP. Therefore glaciers would not have hindered the movement of humans along the southern edge of the Bering Land Bridge for two millennia before the first well-recognized “New World” archaeological sites were inhabited.

A ˜50 ka record of monsoonal variability in the Darjeeling foothill region, eastern Himalayas

NASA Astrophysics Data System (ADS)

Ghosh, Ruby; Bera, Subir; Sarkar, Anindya; Paruya, Dipak Kumar; Yao, Yi-Feng; Li, Cheng-Sen

2015-04-01

Pollen, phytoliths and δ 13C signatures of soil organic matter from two fluvial sedimentary sequences of the Darjeeling foothill region, eastern Himalayas are used to portray palaeoclimatic oscillations and their impact on regional plant communities over the last ˜50 ka. Quantitative palaeoclimate estimation using coexistence approach on pollen data and other proxies indicate significant oscillations in precipitation during the late part of MIS 3 (46.4-25.9 ka), early and middle part of MIS 2 (25.9-15.6 ka), and 5.4 to 3.5 ka. Middle to late MIS 3 (ca 46.4-31 ka.) was characterized by a comparatively low monsoonal activity and slightly higher temperature than that during ca 31 ka onwards. Simultaneous expansion of deciduous trees and chloridoid grasses also imply a drier and warmer phase. Between 31 and 22.3 ka (late MIS 3 to mid-MIS 2), higher precipitation and a slightly cooler temperature led to an increase in evergreen elements over deciduous taxa and wet-loving panicoid grasses over dry-loving chloridoid grasses than earlier. After ca 22.3 ka, shrinking of forest cover, expansion of C4 chloridoid grasses, Asteraceae and Cheno-ams in the vegetation with lowering of temperature and precipitation characterized the onset of the LGM which continued till 18.3 ka. End of the LGM is manifested by a restoration in the forest cover and in the temperature and precipitation regime. Later, during 5.4 to 4.3 ka, a strong monsoonal activity supported a dense moist evergreen forest cover that subsequently declined during 4.3 to 3.5 ka. A further increase in deciduous elements and non-arboreals might be a consequence of reduced precipitation and higher temperature during this phase. A comparison between monsoonal rainfall, MAT and palaeoatmospheric CO2 with floral dynamics since last ˜50 ka indicates that these fluctuations in plant succession were mainly driven by monsoonal variations.

Automated statistical matching of multiple tephra records exemplified using five long maar sequences younger than 75 ka, Auckland, New Zealand

NASA Astrophysics Data System (ADS)

Green, Rebecca M.; Bebbington, Mark S.; Cronin, Shane J.; Jones, Geoff

2014-09-01

Detailed tephrochronologies are built to underpin probabilistic volcanic hazard forecasting, and to understand the dynamics and history of diverse geomorphic, climatic, soil-forming and environmental processes. Complicating factors include highly variable tephra distribution over time; difficulty in correlating tephras from site to site based on physical and chemical properties; and uncertain age determinations. Multiple sites permit construction of more accurate composite tephra records, but correctly merging individual site records by recognizing common events and site-specific gaps is complex. We present an automated procedure for matching tephra sequences between multiple deposition sites using stochastic local optimization techniques. If individual tephra age determinations are not significantly different between sites, they are matched and a more precise age is assigned. Known stratigraphy and mineralogical or geochemical compositions are used to constrain tephra matches. We apply this method to match tephra records from five long sediment cores (≤ 75 cal ka BP) in Auckland, New Zealand. Sediments at these sites preserve basaltic tephras from local eruptions of the Auckland Volcanic Field as well as distal rhyolitic and andesitic tephras from Okataina, Taupo, Egmont, Tongariro, and Tuhua (Mayor Island) volcanic centers. The new correlated record compiled is statistically more likely than previously published arrangements from this area.

Honeycomb development on Alexander Island, glacial history of George VI Sound and palaeoclimatic implications (Two Step Cliffs/Mars Oasis, W Antarctica)

NASA Astrophysics Data System (ADS)

André, Marie-Françoise; Hall, Kevin

2005-02-01

Analysis of three generations of glacial deposits and of a range of geomorphic features including widespread honeycombs and tafonis at Two Step Cliffs/Mars Oasis (71°52‧S, 68°15‧W) provides new insights into the geomorphological evolution of West Antarctica, with special respect to alveolar weathering. At Two Step Terrace, indicators of the inherited character of cavernous weathering were found, such as 97% non-flaking and varnished backwalls, and 80% tafoni floors that are till-covered and/or sealed by lithobiontic coatings. Based on the NE predominant aspect of the alveolized boulder faces, tafoni initiation is attributed to coastal salt spray weathering by halite coming from the George VI Sound during the 6.5 ka BP open water period. The present-day activity of these inherited cavities is restricted to roof flaking attributed to a combination of processes involving thermal stresses. This 6.5 ka BP phase of coastal alveolization is the first step of a six-stage Holocene geomorphological scenario that includes alternatively phases of glacial advance or stationing, and phases of vegetal colonization and/or rock weathering and aeolian abrasion on the deglaciated outcrops. This geomorphic scenario is tentatively correlated with the available palaeoenvironmental record in the Antarctic Peninsula region, with two potential geomorphic indicators of the Holocene Optimum being identified: (1) clusters of centimetric honeycombs facing the sound (marine optimum at 6.5 ka BP); (2) salmon-pink lithobiontic coatings preserved inside cavities and at the boulder surface (terrestrial optimum at 4 3 ka BP).

Changes in northeast Atlantic hydrology during Termination 1: Insights from Celtic margin's benthic foraminifera

NASA Astrophysics Data System (ADS)

Mojtahid, M.; Toucanne, S.; Fentimen, R.; Barras, C.; Le Houedec, S.; Soulet, G.; Bourillet, J.-F.; Michel, E.

2017-11-01

Using benthic foraminiferal-based proxies in sediments from the Celtic margin, we provide a well-dated record across the last deglaciation of the Channel River dynamics and its potential impact on the hydrology of intermediate water masses along the European margin. Our results describe three main periods: 1) During the Last Glacial Maximum, and before ∼21 ka BP, the predominance of meso-oligotrophic species suggests well oxygenated water masses. After ∼21 ka BP, increasing proportions of eutrophic species related to enhanced riverine supply occurs concomitantly with early warming in Greenland air-temperatures; 2) A thick laminated deposit, occurring during a 1500-years long period of seasonal melting of the European Ice Sheet (EIS), is associated with early Heinrich Stadial 1 period (∼18.2-16.7 ka BP). The benthic proxies describe low salinity episodes, cold temperatures, severe dysoxia and eutrophic conditions on the sea floor, perhaps evidence for cascading of turbid meltwaters; 3) During late HS1 (∼16.7-14.7 ka BP), conditions on the Celtic margin's seafloor changed drastically and faunas indicate oligotrophic conditions as a result of the ceasing of EIS meltwater discharges. While surface waters were cold due to Laurentide Ice Sheet (LIS) icebergs releases, increasing benthic Mg/Ca ratios reveal a progressive warming of intermediate water masses whereas oxygen proxies indicate overall well oxygenated conditions. In addition to the well known effect of EIS meltwaters on surface waters in the Celtic margin, our benthic record documents a pronounced impact on intermediate water depths during HS1, which coincided with major AMOC disruptions.

Surface Water Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

Lacustrine Basal Ages Constrain the Last Deglaciation in the Uinta Mountains, Utah, USA

NASA Astrophysics Data System (ADS)

Munroe, Jeffrey; Laabs, Benjamin

2013-04-01

Basal radiocarbon ages from 21 high-elevation lakes limit the timing of final Pleistocene deglaciation in the Uinta Mountains of northeastern Utah, USA. The lakes are located in glacial valleys and cirques 5 to 20 km upstream from LGM terminal moraines at elevations from 2830 to 3475 m. Many are impounded behind recessional moraines. Cores were retrieved from a floating platform with a percussion corer driven to the point of refusal. All penetrated inorganic silty clay beneath gyttja. AMS radiocarbon analyses were made on terrestrial macrofossils, daphnia ephippia, pollen concentrates, and bulk sediment retrieved from the base of each core. No radiocarbon reservoir effect was observed when bulk dates were checked against terrestrial material. Radiocarbon results were converted to calendar years using the IntCal09 calibration curve in OxCal 4.1. Given the stratigraphy observed in the cores, these calibrated basal ages are considered close limits on the timing of the local deglaciation and lake formation. The oldest three lakes have basal radiocarbon ages that calibrate to a few centuries after the Bölling/Alleröd warming, indicating that the landscape was becoming ice free at this time. These are followed by an overlapping group of five lakes with basal ages between 13.5 and 13.0 ka BP. Five more cores, from four separate lakes, have basal ages tightly clustered between 13.0 and 12.5 ka BP. Three of these lakes are dammed by moraines, suggesting glacial activity during the early part of the Younger Dryas interval. The lone kettle lake in the study yielded a basal age of 12.3 ka BP, considerably younger than the basal age of 13.9 ka BP from a nearby lake filling a bedrock basin, indicating that buried ice may have been locally stable for more than a millennium after deglaciation. The remaining seven lakes have basal ages between 12.0 and 11.0 ka BP. Four of these lakes are also dammed by moraines. These two non-overlapping clusters of basal ages for moraine

Holocene climate variability, vegetation dynamics and fire regime in the central Pyrenees: the Basa de la Mora sequence (NE Spain)

NASA Astrophysics Data System (ADS)

Pérez-Sanz, A.; González-Sampériz, P.; Moreno, A.; Valero-Garcés, B.; Gil-Romera, G.; Rieradevall, M.; Tarrats, P.; Lasheras-Álvarez, L.; Morellón, M.; Belmonte, A.; Sancho, C.; Sevilla-Callejo, M.; Navas, A.

2013-08-01

High resolution multiproxy data (pollen, sedimentology, geochemistry, chironomids and charcoal) from the Basa de la Mora (BSM) lake sequence (42° 32' N, 0° 19' E, 1914 m a.s.l.) show marked climate variability in the central southern Pyrenees throughout the Holocene. A robust age model based on 15 AMS radiocarbon dates underpins the first precise reconstruction of rapid climate changes during the Holocene from this area. During the Early Holocene, increased winter snowpack and high snowmelt during summer, as a consequence of high seasonality, led to higher lake levels, a chironomid community dominated by non-lacustrine taxa (Orthocladiinae) related to higher inlet streams, and a forested landscape with intense run-off processes in the watershed. From 9.8 to 8.1 cal ka BP, climate instability is inferred from rapid and intense forest shifts and high fluctuation in surface run-off. Shifts among conifers and mesophytes reveal at least four short-lived dry events at 9.7, 9.3, 8.8 and 8.3 cal ka BP. Between 8.1 and 5.7 cal ka BP a stable climate with higher precipitation favoured highest lake levels and forest expansion, with spread of mesophytes, withdrawal of conifers and intensification of fires, coinciding with the Holocene Climate Optimum. At 5.7 cal ka BP a major change leading to drier conditions contributed to a regional decline in mesophytes, expansion of pines and junipers, and a significant lake level drop. Despite drier conditions, fire activity dropped as consequence of biomass reduction. Two arid intervals occurred between 2.9 and 2.4 cal ka BP and at 1.2-0.7 cal ka BP (800-1300 AD). The latter coincides with the Medieval Climate Anomaly and is one of the most arid phases of the Holocene in BSM sequence. Anthropogenic disturbances were small until 700 AD, when human pressure over landscape intensified, with Olea cultivation in the lowlands and significant deforestation in highlands. Colder and unfavourable weather conditions during the second part of the

Roles of Sea Level and Climate Change in the Development of Holocene Deltaic Sequences in the Yellow Sea

NASA Astrophysics Data System (ADS)

Liu, J.; Milliman, J. D.

2002-12-01

Both post-glacial sea-level and climatic changes are preserved in the the shallow, low gradient, sediment-dominated Yellow Sea. As a result of rapid flooding during melt-water pulse (MWP) 1A, 14.3-14.1 ka BP, sea level reached the southern edge of the North Yellow Sea (NYS), and after MWP-1B (11.6-11.4 ka BP) sea level entered the Bohai Sea. The first major Yellow River-derived deltaic deposit formed in the NYS during decelerated transgression following MWP-1B and increased river discharge in response to re-intensification of the summer monsoon about 11 ka cal BP. A second subaqueous delta formed in the South Yellow Sea about 9-7 ka BP during decelerated transgression after MWP-1C flooding and in response to the southern shift of the Yellow River mouth. The modern subaqueous and subaerial deltas in the west Bahai Gulf and (to a lesser extent) along the Jiangus coast have formed during the modern sea-level highstand. These changing Holocene patterns are most clearly illustrated by a short film clip.

A Gigabit-per-Second Ka-Band Demonstration Using a Reconfigurable FPGA Modulator

NASA Technical Reports Server (NTRS)

Lee, Dennis; Gray, Andrew A.; Kang, Edward C.; Tsou, Haiping; Lay, Norman E.; Fong, Wai; Fisher, Dave; Hoy, Scott

2005-01-01

Gigabit-per-second communications have been a desired target for future NASA Earth science missions, and for potential manned lunar missions. Frequency bandwidth at S-band and X-band is typically insufficient to support missions at these high data rates. In this paper, we present the results of a 1 Gbps 32-QAM end-to-end experiment at Ka-band using a reconfigurable Field Programmable Gate Array (FPGA) baseband modulator board. Bit error rate measurements of the received signal using a software receiver demonstrate the feasibility of using ultra-high data rates at Ka-band, although results indicate that error correcting coding and/or modulator predistortion must be implemented in addition. Also, results of the demonstration validate the low-cost, MOS-based reconfigurable modulator approach taken to development of a high rate modulator, as opposed to more expensive ASIC or pure analog approaches.

Rate and style of ice stream retreat constrained by new surface-exposure ages: The Minch, NW Scotland

NASA Astrophysics Data System (ADS)

Bradwell, Tom; Small, David; Fabel, Derek; Dove, Dayton; Cofaigh, Colm O.; Clark, Chris; Consortium, Britice-Chrono

2016-04-01

Chronologically constrained studies of former ice-sheet extents and dynamics are important for understanding past cryospheric responses and modelling future ice-sheet and sea-level change. As part of the BRITICE-CHRONO project, we present new geomorphological and chronological data from a marine-terminating ice stream system in NW Europe that operated during the Late Weichselian Glaciation. A suite of 51 cosmogenic-nuclide exposure ages from ice sheet moraines and glacially transported boulders constrain the maximum extent of the ice sheet on the continental shelf (~28 ka BP) and its subsequent retreat, between ~27 and 16 ka BP, into a large marine embayment (ca. 7000 km2; the Minch, NW Scotland). Recently acquired swath bathymetry and acoustic sub-bottom profiler data reveal several large transverse grounding-zone wedges up to 40 m thick and 5 km wide with diagnostic acoustic-facies architecture. These seabed sediment wedges mark former quasi-stable positions of grounded marine-terminating ice-stream fronts; their size and thickness suggest long-lived stillstands of the order of centuries. Statistically significant clusters of exposure ages from glacial deposits on islands and intervening headlands shed important new light on the age of these marine grounding-zone wedges and, by inference, the rate and timing of Minch palaeo-ice stream retreat. We find strong evidence for episodic ice stream retreat on the continental shelf between ~28-24 ka BP, in the outer Minch between ~24-22 ka BP, and in the central Minch between 22-18.5 ka BP. In contrast, final ice stream deglaciation (<18 ka) across the deepest parts of the inner Minch embayment, was probably rapid and uninterrupted - with the ice sheet margin at or close to the present-day coastline in NW Scotland by 16.1 ka BP. It is hoped that these results will form the empirical basis for future ice-sheet modelling of this dynamically sensitive sector of the British-Irish Ice Sheet.

A Structure-Adaptive Hybrid RBF-BP Classifier with an Optimized Learning Strategy

PubMed Central

Wen, Hui; Xie, Weixin; Pei, Jihong

2016-01-01

This paper presents a structure-adaptive hybrid RBF-BP (SAHRBF-BP) classifier with an optimized learning strategy. SAHRBF-BP is composed of a structure-adaptive RBF network and a BP network of cascade, where the number of RBF hidden nodes is adjusted adaptively according to the distribution of sample space, the adaptive RBF network is used for nonlinear kernel mapping and the BP network is used for nonlinear classification. The optimized learning strategy is as follows: firstly, a potential function is introduced into training sample space to adaptively determine the number of initial RBF hidden nodes and node parameters, and a form of heterogeneous samples repulsive force is designed to further optimize each generated RBF hidden node parameters, the optimized structure-adaptive RBF network is used for adaptively nonlinear mapping the sample space; then, according to the number of adaptively generated RBF hidden nodes, the number of subsequent BP input nodes can be determined, and the overall SAHRBF-BP classifier is built up; finally, different training sample sets are used to train the BP network parameters in SAHRBF-BP. Compared with other algorithms applied to different data sets, experiments show the superiority of SAHRBF-BP. Especially on most low dimensional and large number of data sets, the classification performance of SAHRBF-BP outperforms other training SLFNs algorithms. PMID:27792737

A Ka-band (32 GHz) beacon link experiment (KABLE) with Mars Observer

NASA Technical Reports Server (NTRS)

Riley, A. L.; Hansen, D. M.; Mileant, A.; Hartop, R. W.

1987-01-01

A proposal for a Ka-Band (32 GHz) Link Experiment (KABLE) with the Mars Observer mission was submitted to NASA. The experiment will rely on the fourth harmonic of the spacecraft X-band transmitter to generate a 33.6 GHz signal. The experiment will rely also on the Deep Space Network (DSN) receiving station equipped to simultaneously receive X- and Ka-band signals. The experiment will accurately measure the spacecraft-to-Earth telecommunication link performance at Ka-band and X-band (8.4 GHz).

Evidence for Holocene centennial variability in sea ice cover based on IP25 biomarker reconstruction in the southern Kara Sea (Arctic Ocean)

NASA Astrophysics Data System (ADS)

Hörner, Tanja; Stein, Rüdiger; Fahl, Kirsten

2017-10-01

The Holocene is characterized by the late Holocene cooling trend as well as by internal short-term centennial fluctuations. Because Arctic sea ice acts as a significant component (amplifier) within the climate system, investigating its past long- and short-term variability and controlling processes is beneficial for future climate predictions. This study presents the first biomarker-based (IP25 and PIP25) sea ice reconstruction from the Kara Sea (core BP00-07/7), covering the last 8 ka. These biomarker proxies reflect conspicuous short-term sea ice variability during the last 6.5 ka that is identified unprecedentedly in the source region of Arctic sea ice by means of a direct sea ice indicator. Prominent peaks of extensive sea ice cover occurred at 3, 2, 1.3 and 0.3 ka. Spectral analysis of the IP25 record revealed 400- and 950-year cycles. These periodicities may be related to the Arctic/North Atlantic Oscillation, but probably also to internal climate system fluctuations. This demonstrates that sea ice belongs to a complex system that more likely depends on multiple internal forcing.

Insights from a synthesis of old and new climate-proxy data from the Pyramid and Winnemucca lake basins for the period 48 to 11.5 cal ka

USGS Publications Warehouse

Benson, Larry; Smoot, J.P.; Lund, S.P.; Mensing, S.A.; Foit, F.F.; Rye, R.O.

2013-01-01

A synthesis of old and new paleoclimatic data from the Pyramid and Winnemucca lake basins indicates that, between 48.0 and 11.5·103 calibrated years BP (hereafter ka), the climate of the western Great Basin was, to a degree, linked with the climate of the North Atlantic. Paleomagnetic secular variation (PSV) records from Pyramid Lake core PLC08-1 were tied to the GISP2 ice-core record via PSV matches to North Atlantic sediment cores whose isotopic and(or) carbonate records could be linked to the GISP2 δ18O record. Relatively dry intervals in the western Great Basin were associated with cold Heinrich events and relatively wet intervals were associated with warm Dansgaard-Oeschger (DO) oscillations. The association of western Great Basin dry events with North Atlantic cold events (and vice versa) switched sometime after the Laurentide Ice Sheet (LIS) reached its maximum extent. For example, the Lahontan highstand, which culminated at 15.5 ka, and a period of elevated lake level between 13.1 and 11.7 ka were associated with cold North Atlantic conditions, the latter period with the Youngest Dryas event. Relatively dry periods were associated with the Bølling and Allerød warm events. A large percentage of the LIS may have been lost to the North Atlantic during Heinrich events 1 and 2 and may have resulted in the repositioning of the Polar Jet Stream over North America. The Trego Hot Springs, Wono, Carson Sink, and Marble Bluff tephras found in core PLC08-1 have been assigned GISP2 calendar ages of respectively, 29.9, 33.7, 34.1, and 43.2 ka. Given its unique trace-element chemistry, the Carson Sink Bed is the same as Wilson Creek Ash 15 in the Mono Lake Basin. This implies that the Mono Lake magnetic excursion occurred at approximately 34 ka and it is not the Laschamp magnetic excursion. The entrance of the First Americans into the northern Great Basin is dated to approximately 14.4 ka, a time when the climate was relatively dry. Evidence for human occupation of

Middle Holocene Changes in Midwestern Precipitation Intensity Captured by Indiana Stalagmites

NASA Astrophysics Data System (ADS)

Akers, P. D.; Brook, G. A.; Liang, F.; Cheng, H.; Edwards, R. L.

2017-12-01

Three stalagmites collected from Upper Porter Cave in southern Indiana provide a record of Midwestern hydroclimate changes for the period 2.3-8.4 ka BP. Our record spans the Middle Holocene, known as a time of mid-continental drying for North America and used as an analog for warmer future climates. The spatial extent of this drying is not well constrained, and some eastern North American records show wetter conditions coinciding with the drying of the continental interior. Southern Indiana is located on the eastern periphery of mid-continental North America, and our stalagmite records can help constrain the eastern extent of drying. Upper Porter Cave floods easily during heavy rain events, and modern observations suggest frequent cave flooding prevents stalagmite growth. Thus, we view periods of stalagmite growth as a proxy for a less intense and possibly drier precipitation regime that limits cave flooding. All three stalagmites began growing 8.4 ka BP and stopped growing 7.5 ka BP. This hiatus at 7.5 ka BP is associated with laminae dissolution and greater sediment incorporation (see image), supporting increased precipitation intensity and cave flooding at this time. This contrasts with concurrent drying in the mid-continent and suggests a Middle Holocene with a steeper east-west precipitation gradient than present. This period of greater precipitation intensity extended until 4.9 ka BP when one stalagmite re-initiated growth, possibly due to mid-continental dryness expanding eastward into southern Indiana. This renewed growth was intermittent at 4.7-4.9, 3.6-4.2, and 2.3-3.1 ka BP, and multi-century flood-driven hiatuses separate these drier periods. A more intense precipitation regime that lasts until present provoked final growth cessation at 2.3 ka BP. Combined with other regional hydroclimate records, our stalagmite suggests that the transition from the Middle to Late Holocene was a period of unstable precipitation regimes for the eastern mid

A 13,500 Year Record of Holocene Climate, Fire and Vegetation from Swan Lake, Idaho, USA

NASA Astrophysics Data System (ADS)

Wahl, D.; Anderson, L.; Miller, D. M.; Rosario, J. J.; Starratt, S.; McGeehin, J. P.; Bright, J. E.

2015-12-01

Modern climate dynamics in the western US are largely determined by a combination of two factors: 1) the strength and position of midlatitude pressure systems, which, in turn, are responsible for the generation and trajectory of winter storms, and 2) the strength of the North America Monsoon (NAM) which brings summer precipitation northward in response to northern hemisphere warming. Paleoclimate records from the Great Basin of the western US suggest some coherence in the timing of major climatic shifts during the Holocene. However, knowledge of the timing and magnitude of these changes at local scales, which can help explain the relative contribution of midlatitude winter storms vs. NAM, is lacking in many places. Here we present new data that constrain the timing and magnitude of late glacial and Holocene climate variability in the northeastern Great Basin, provide insight into past spatial variability of precipitation patterns in the western US, and improve our understanding of regional scale influences on Great Basin climate. In 2011, a 7.65 m sediment core was raised from Swan Lake, a small wetland located in southeastern Idaho that was formed in the spillway channel created by the catastrophic flooding of Lake Bonneville ~18 ka BP. Pollen, charcoal, clumped isotope, diatom, ostracod, and sedimentological data are used to reconstruct vegetation, fire history, and lake level/groundwater flux over the last 13,500 years. Age control is provided by 19 AMS radiocarbon determinations, which are reported as thousands of calibrated years before present (ka BP). This effort builds on earlier work by Bright (1966) who reported on pollen, macrofossils, and sediment type from Swan Lake. Our data suggest cool and wet conditions prevailed until around 12.3 ka BP, after which a drying trend begins. The early Holocene was marked by a warmer, drier climate, which persisted until around 6.2 ka BP. Moister conditions after 6.2 ka BP likely resulted from a combination of enhanced

Deployment and Operational Experiences with CernVM-FS at the GridKa Tier-1 Center

NASA Astrophysics Data System (ADS)

Alef, Manfred; Jäger, Axel; Petzold and, Andreas; Verstege, Bernhard

2012-12-01

In 2012 the GridKa Tier-1 computing center hosts 130 kHS06 computing resources and 14PB disk and 17PB tape space. These resources are shared between the four LHC VOs and a number of national and international VOs from high energy physics and other sciences. CernVM-FS has been deployed at GridKa to supplement the existing NFS-based system to access VO software on the worker nodes. It provides a solution tailored to the requirement of the LHC VOs. We will focus on the first operational experiences and the monitoring of CernVM-FS on the worker nodes and the squid caches.

South Asian climate change at the end of urban Harappan (Indus valley) civilization and mechanisms of Holocene monsoon variability

NASA Astrophysics Data System (ADS)

Staubwasser, M.; Sirocko, F.; Erlenkeuser, H.; Grootes, P. M.; Segl, M.

2003-04-01

Planktonic oxygen isotope ratios from the well-dated laminated sediment core 63KA off the river Indus delta are presented. The record reveals significant climate changes in the south Asian monsoon system throughout the Holocene. The most prominent event of the early-mid Holocene occurred after 8.4 ka BP and is within dating error of the GISP/GRIP event centered at 8.2 ka BP. The late Holocene is generally more variable and the largest change of the entire Holocene occurred at 4.2 ka BP. This event is concordant with the end of urban Harappan civilization in the Indus valley. Opposing isotopic trends across the northern Arabian Sea surface indicate a reduction in Indus river discharge at that time. Consequently, sustained drought may have initiated the archaeologically recorded interval of southeastward habitat tracking within the Harappan cultural domain. The hemispheric significance of the 4.2 ka BP event is evident from concordant climate change in the eastern Mediterranean and the Middle East. The remainder of the late Holocene shows drought cycles of approximately 700 years that are coherent with the evolution of cosmogenic radiocarbon production rates in the atmosphere. This suggests that solar variability is one fundamental cause behind late Holocene rainfall changes over south Asia.

Strong Altitudinal Control on Local Glacier's Response to Holocene Climate Change in Southwest Greenland

NASA Astrophysics Data System (ADS)

Larsen, N. K.; Levy, L.; Strunk, A.; Bjork, A. A.; Olsen, J.; Jeppesen, E.; Lauridsen, T.; Davidson, T. A.

2017-12-01

The sensitivity of glaciers and ice caps (GICs) in Greenland to prolonged warm periods is poorly constrained and geological records documenting the long-term glacial history are needed to put recent observations into a broader perspective. Here we report the results from three proglacial lakes where fluctuations in local glaciers located at different altitudes in Kobbefjord, southwest Greenland have been recorded. Our results show that the lakes received meltwater from the initial deglaciation of the area 9.2 cal. ka BP until 8.7-7.9 cal. ka BP when the meltwater input ceased as the glaciers most likely disappeared. Regrowth of glaciers began again at 5.5 cal. ka BP at 1,370 m a.s.l., 3.6 cal. ka at 1,170 m a.s.l., and 1.6 cal. ka BP at 1,000 m a.s.l., clearly reflecting strong altitudinal control of the GIC response to Neoglacial cooling. Our results highlight that GICs in Kobbefjord, southwest Greenland are primarily influenced by changes in summer air temperatures and winter precipitation and that they are facing a rapid decay that most likely will result in their disappearance within the next centuries as a consequence of global warming.

Pollen stratigraphy, vegetation and climate history of the last 215 ka in the Azzano Decimo core (plain of Friuli, north-eastern Italy)

NASA Astrophysics Data System (ADS)

Pini, R.; Ravazzi, C.; Donegana, M.

2009-06-01

The pollen record of the long succession of marine and continental deposits filling the subsident north-Adriatic foredeep basin (NE Italy) documents the history of vegetation, the landscape evolution and the climate forcing during the last 215 ka at the south-eastern Alpine foreland. The chronology relies on several 14C determinations as well as on estimated ages of pollen-stratigraphical and sea-level event tie-points derived from comparison with high-resolution marine records, speleothemes and ice cores. Mixed temperate rainforests persisted throughout MIS 7a-7c, being replaced by conifer forests after the local glacioeustatic regression during early MIS 6. The Alpine piedmont facing the Adriatic foredeeep was glaciated at the culmination of the penultimate glaciation, as directly testified by in situ fluvioglacial aggradation related to the building of a large morainic amphitheatre. The pollen record allows correlation with other European records and with the IRD from N-Atlantic and off Iberia, thus the duration of the penultimate glacial culmination at the southalpine fringe is estimated less than 13 ka between 148 ± 1 and >135 ka. The site was not reached by the Last Interglacial maximum sea transgression and enregistered a typical, though incomplete, Eemian forest record, lacking Mediterranean evergreen trees. A complex sequence of stadial-interstadial episodes is reconstructed during the Early and Middle Würm: major xerophyte peaks match IRD maxima occurred during Heinrich events in deep-sea cores offshore Iberia and in the N-Atlantic and allows to frame lumps of interstadial phases, marked by Picea peaks, each one including several DO warm events. Broad-leaved thermophilous forests disappeared from the north-eastern plain of Italy at the end of the Early Würm, whereas reduced populations of Abies and Fagus probably sheltered even during the Last Glacial Maximum. A renewed fluvioglacial in situ deposition between 30.4 ± 0.4 and 21.6 ± 0.5 ka cal BP sets

Sediment records of Yellow River channel migration and Holocene environmental evolution of the Hetao Plain, northern China

NASA Astrophysics Data System (ADS)

Wang, Jingzhong; Wu, Jinglu; Pan, Baotian; Jia, Hongjuan; Li, Xiao; Wei, Hao

2018-05-01

The origin and evolution of lakes in the Hetao Plain, northern China, were influenced by climate variation, channel migration, and human activity. We analyzed a suite of sediment cores from the region to investigate Yellow River channel migration and environmental change in this region over the Holocene. Short sediment cores show that environmental indicators changed markedly around CE 1850, a time that corresponds to flood events, when large amounts of river water accumulated in the western part of the Hetao Plain, giving rise to abundant small lakes. Multiple sediment variables (environmental proxies) from two long cores collected in the Tushenze Paleolake area show that sediments deposited between 12.0 and 9.0 cal ka BP were yellow clay, indicative of fluvial deposition and channel migration. From 9.0 to 7.5 cal ka BP, sand was deposited, reflecting a desert environment. From 7.5 to 2.2 cal ka BP, however, the sediments were blue-gray clay that represents lacustrine facies of Lake Tushenze, which owes its origin to an increase in strength of the East Asian monsoon. At about 2.2 cal ka BP, the north branch of the Yellow River was flooded, and the Tushenze Paleolake developed further. Around 2.0 cal ka BP, the paleolake shrank and eolian sedimentation was recorded. The analyzed sediment records are consistent with the written history from the region, which documents channel migration and environmental changes in the Hetao Plain over the Holocene.

A robust, multisite Holocene history of drift ice off northern Iceland: Implications for North Atlantic climate

USGS Publications Warehouse

Andrews, John T.; Darby, D.; Eberle, D.; Jennings, A.E.; Moros, M.; Ogilvie, A.

2009-01-01

An important indicator of Holocene climate change is provided by evidence for variations in the extent of drift ice. A proxy for drift ice in Iceland waters is provided by the presence of quartz. Quantitative x-ray diffraction analysis of the < 2 mm sediment fraction was undertaken on 16 cores from around Iceland. The quartz weight (wt.)% estimates from each core were integrated into 250-yr intervals between ????'0.05 and 11.7 cal. ka BP. Median quartz wt.% varied between 0.2 and 3.4 and maximum values ranged between 2.8 and 11.8 wt.%. High values were attained in the early Holocene and minimum values were reached 6 - 7 cal. ka BP. Quartz wt.% then rose steadily during the late Holocene. Our data exhibit no correlation with counts on haematite-stained quartz (HSQ) grains from VM129-191 west of Ireland casting doubt on the ice-transport origin. A pilot study on the provenance of Fe oxide grains in two cores that cover the last 1.3 and 6.1 cal. ka BP indicated a large fraction of the grains between 1 and 6 cal. ka BP were from either Icelandic or presently unsampled sources. However, there was a dramatic increase in Canadian and Russian sources from the Arctic Ocean ???1 cal. ka BP. These data may indicate the beginning of an Arctic Oscillation-like climate mode. ?? 2009 SAGE Publications.

Occurrence of 4-tert-butylphenol (4-t-BP) biodegradation in an aquatic sample caused by the presence of Spirodela polyrrhiza and isolation of a 4-t-BP-utilizing bacterium.

PubMed

Ogata, Yuka; Toyama, Tadashi; Yu, Ning; Wang, Xuan; Sei, Kazunari; Ike, Michihiko

2013-04-01

Although 4-tert-butylphenol (4-t-BP) is a serious aquatic pollutant, its biodegradation in aquatic environments has not been well documented. In this study, 4-t-BP was obviously and repeatedly removed from water from four different environments in the presence of Spirodela polyrrhiza, giant duckweed, but 4-t-BP persisted in the environmental waters in the absence of S. polyrrhiza. Also, 4-t-BP was not removed from autoclaved pond water with sterilized S. polyrrhiza. These results suggest that the 4-t-BP removal from the environmental waters was caused by biodegradation stimulated by the presence of S. polyrrhiza rather than by uptake by the plant. Moreover, Sphingobium fuliginis OMI capable of utilizing 4-t-BP as a sole carbon and energy source was isolated from the S. polyrrhiza rhizosphere. Strain OMI degraded 4-t-BP via a meta-cleavage pathway, and also degraded a broad range of alkylphenols with linear or branched alkyl side chains containing two to nine carbon atoms. Root exudates of S. polyrrhiza stimulated 4-t-BP degradation and cell growth of strain OMI. Thus, the stimulating effects of S. polyrrhiza root exudates on 4-t-BP-degrading bacteria might have contributed to 4-t-BP removal in the environmental waters with S. polyrrhiza. These results demonstrate that the S. polyrrhiza-bacteria association may be applicable to the removal of highly persistent 4-t-BP from wastewaters or polluted aquatic environments.

The Island of Amsterdamøya: A key site for studying past climate in the Arctic Archipelago of Svalbard

NASA Astrophysics Data System (ADS)

Bakke, Jostein; Balascio, Nicholas; van der Bilt, Willem G. M.; Bradley, Raymond; D'Andrea, William J.; Gjerde, Marthe; Ólafsdóttir, Sædís; Røthe, Torgeir; De Wet, Greg

2018-03-01

This paper introduces a series of articles assembled in a special issue that explore Holocene climate evolution, as recorded in lakes on the Island of Amsterdamøya on the westernmost fringe of the Arctic Svalbard archipelago. Due to its location near the interface of oceanic and atmospheric systems sourced from Arctic and Atlantic regions, Amsterdamøya is a key site for recording the terrestrial response to marine and atmospheric changes. We employed multi-proxy approaches on lake sediments, integrating physical, biogeochemical, and isotopic analyses to infer past changes in temperature, precipitation, and glacier activity. The results comprise a series of quantitative Holocene-length paleoclimate reconstructions that reveal different aspects of past climate change. Each of the four papers addresses various facets of the Holocene climate history of north-western Svalbard, including a reconstruction of the Annabreen glacier based on the sedimentology of the distal glacier-fed lake Gjøavatnet, a reconstruction of changing hydrologic conditions based on sedimentology and stratigraphy in Lake Hakluytvatnet, reconstruction of summer temperature based on alkenone paleothermometry from lakes Hakluytvatnet and Hajeren, and a hydrogen isotope-based hydrological reconstruction from lake Hakluytvatnet. We also present high-resolution paleomagnetic secular variation data from the same lake, which document important regional magnetic field variations and demonstrate the potential for use in synchronizing Holocene sedimentary records in the Arctic. The paleoclimate picture that emerges is one of early Holocene warmth from ca. 10.5 ka BP interrupted by transient cooling ca. 10-8ka BP, and followed by cooling that mostly manifested as two stepwise events ca. 7 and 4 ka BP. The past 4ka were characterized by dynamic glaciers and summer temperature fluctuations decoupled from the declining summer insolation.

Vegetation and climate history in the Laptev Sea region (arctic Siberia) during Late Quaternary inferred from pollen records

NASA Astrophysics Data System (ADS)

Andreev, A.; Schirrmeister, L.; Tarasov, P.

2009-04-01

A number of permafrost sections dated by 14C, TL, IRSL, and 230U/Th were analysed for pollen. Pollen spectra suggest that wet grass-sedge tundra habitats dominated during an interstadial c. 200-170 ka ago. The climate was rather wet and cold. The pollen spectra reflect sparser grass-sedge vegetation cover during the Late Saalian stadial, c. 170-130 ka BP. Environmental conditions were much more severe compared with the previous interstadial. Open Poaceae and Artemisia communities dominated at the beginning of the Last Interglacial. Some shrubs (Alnus fruticosa, Salix, Betula nana) grew in more protected and wetter places. Climate was rather warm (similar to modern conditions)during this time. Shrub tundra with Alnus fruticosa and Betula nana s.l. dominated in the area during the Eemian climatic optimum, when summer temperatures were 4-5°C higher than today. Early Weichselian pollen records reflect harsh environmental conditions; sparser vegetation (mostly grass and sedge communities) during this time. Middle Weichselian (Karginsky) Interstadial records with dominance of Cyperaceae and Poaceae with some Artemisia and Salix reflects tundra- and steppe-like associations with willow shrubs dominated the area. The climate was relatively moist and warm. A rather high content of algae colonies in the sediments indicates shallow water habitats (e.g. centres of ice wedge polygons). Dominance of Poaceae, Cyperaceae, Artemisia, and Caryophyllaceae pollen with some other herbs is typical for the 40-32 ka BP (climatic optimum) old sediments when open herb dominated the area. High pollen concentrations reflect that dense grass-sedge dominated vegetation; presence of Salix is also characteristic. The records point to climate amelioration during the Middle Weichselian compared to the Early Weichselian. Climate conditions became colder and drier c. 30-26 ka BP. Pollen spectra reflect that sedge-grass-Artemisia with some Caryophyllaceae and Asteraceae dominated the vegetation

AOD furnace splash soft-sensor in the smelting process based on improved BP neural network

NASA Astrophysics Data System (ADS)

Ma, Haitao; Wang, Shanshan; Wu, Libin; Yu, Ying

2017-11-01

In view of argon oxygen refining low carbon ferrochrome production process, in the splash of smelting process as the research object, based on splash mechanism analysis in the smelting process , using multi-sensor information fusion and BP neural network modeling techniques is proposed in this paper, using the vibration signal, the audio signal and the flame image signal in the furnace as the characteristic signal of splash, the vibration signal, the audio signal and the flame image signal in the furnace integration and modeling, and reconstruct splash signal, realize the splash soft measurement in the smelting process, the simulation results show that the method can accurately forecast splash type in the smelting process, provide a new method of measurement for forecast splash in the smelting process, provide more accurate information to control splash.

CacyBP/SIP nuclear translocation induced by gastrin promotes gastric cancer cell proliferation

PubMed Central

Zhai, Hui-Hong; Meng, Juan; Wang, Jing-Bo; Liu, Zhen-Xiong; Li, Yuan-Fei; Feng, Shan-Shan

2014-01-01

AIM: To investigate the role of nuclear translocation of calcyclin binding protein, also called Siah-1 interacting protein (CacyBP/SIP), in gastric carcinogenesis. METHODS: The expression of CacyBP/SIP protein in gastric cancer cell lines was detected by Western blot. Immunofluorescence experiments were performed on gastric cancer cell lines that had been either unstimulated or stimulated with gastrin. To confirm the immunofluorescence findings, the relative abundance of CacyBP/SIP in nuclear and cytoplasmic compartments was assessed by Western blot. The effect of nuclear translocation of CacyBP/SIP on cell proliferation was examined using MTT assay. The colony formation assay was used to measure clonogenic cell survival. The effect of CacyBP/SIP nuclear translocation on cell cycle progression was investigated. Two CacyBP/SIP-specific siRNA vectors were designed and constructed to inhibit CacyBP/SIP expression in order to reduce the nuclear translocation of CacyBP/SIP, and the expression of CacyBP/SIP in stably transfected cells was determined by Western blot. The effect of inhibiting CacyBP/SIP nuclear translocation on cell proliferation was then assessed. RESULTS: CacyBP/SIP protein was present in most of gastric cancer cell lines. In unstimulated cells, CacyBP/SIP was distributed throughout the cytoplasm; while in stimulated cells, CacyBP/SIP was found mainly in the perinuclear region. CacyBP/SIP nuclear translocation generated a growth-stimulatory effect on cells. The number of colonies in the CacyBP/SIP nuclear translocation group was significantly higher than that in the control group. The percentage of stimulated cells in G1 phase was significantly lower than that of control cells (69.70% ± 0.46% and 65.80% ± 0.60%, control cells and gastrin-treated SGC7901 cells, P = 0.008; 72.99% ± 0.46% and 69.36% ± 0.51%, control cells and gastrin-treated MKN45 cells, P = 0.022). CacyBP/SIPsi1 effectively down-regulated the expression of CacyBP/SIP, and cells stably

CacyBP/SIP nuclear translocation induced by gastrin promotes gastric cancer cell proliferation.

PubMed

Zhai, Hui-Hong; Meng, Juan; Wang, Jing-Bo; Liu, Zhen-Xiong; Li, Yuan-Fei; Feng, Shan-Shan

2014-08-07

To investigate the role of nuclear translocation of calcyclin binding protein, also called Siah-1 interacting protein (CacyBP/SIP), in gastric carcinogenesis. The expression of CacyBP/SIP protein in gastric cancer cell lines was detected by Western blot. Immunofluorescence experiments were performed on gastric cancer cell lines that had been either unstimulated or stimulated with gastrin. To confirm the immunofluorescence findings, the relative abundance of CacyBP/SIP in nuclear and cytoplasmic compartments was assessed by Western blot. The effect of nuclear translocation of CacyBP/SIP on cell proliferation was examined using MTT assay. The colony formation assay was used to measure clonogenic cell survival. The effect of CacyBP/SIP nuclear translocation on cell cycle progression was investigated. Two CacyBP/SIP-specific siRNA vectors were designed and constructed to inhibit CacyBP/SIP expression in order to reduce the nuclear translocation of CacyBP/SIP, and the expression of CacyBP/SIP in stably transfected cells was determined by Western blot. The effect of inhibiting CacyBP/SIP nuclear translocation on cell proliferation was then assessed. CacyBP/SIP protein was present in most of gastric cancer cell lines. In unstimulated cells, CacyBP/SIP was distributed throughout the cytoplasm; while in stimulated cells, CacyBP/SIP was found mainly in the perinuclear region. CacyBP/SIP nuclear translocation generated a growth-stimulatory effect on cells. The number of colonies in the CacyBP/SIP nuclear translocation group was significantly higher than that in the control group. The percentage of stimulated cells in G1 phase was significantly lower than that of control cells (69.70% ± 0.46% and 65.80% ± 0.60%, control cells and gastrin-treated SGC7901 cells, P = 0.008; 72.99% ± 0.46% and 69.36% ± 0.51%, control cells and gastrin-treated MKN45 cells, P = 0.022). CacyBP/SIPsi1 effectively down-regulated the expression of CacyBP/SIP, and cells stably transfected by CacyBP

Ka-band MMIC subarray technology program (Ka-Mist)

NASA Technical Reports Server (NTRS)

Pottenger, Warren

1995-01-01

The broad objective of this program was to demonstrate a proof of concept insertion of Monolithic Microwave Integrated Circuit (MMIC) device technology into an innovative (tile architecture) active phased array antenna application supporting advanced EHF communication systems. Ka-band MMIC arrays have long been considered as having high potential for increasing the capability of space, aircraft, and land mobile communication systems in terms of scan performance, data rate, link margin, and flexibility while offering a significant reduction in size, weight, and power consumption. Insertion of MMIC technology into antenna systems, particularly at millimeter wave frequencies using low power and low noise amplifiers in close proximity to the radiating elements, offers a significant improvement in the array transmit efficiency, receive system noise figure, and overall array reliability. Application of active array technology also leads to the use of advanced beamforming techniques that can improve beam agility, diversity, and adaptivity to complex signal environments.

Limiting age for the Provo shoreline of Lake Bonneville

USGS Publications Warehouse

Miller, David; Wahl, David B.; McGeehin, John; Rosario, Jose J.; Oviatt, Charles G.; Anderson, Lysanna; Presnetsova, Liubov S.

2015-01-01

Pluvial Lake Bonneville features a prominent shoreline at the Provo level, which has been interpreted as having formed during a period of threshold-stabilized overflow. The timing of Provo shoreline development is important for paleoclimate interpretations and for inferences on geomorphic process rates. Estimates for the timing of the shoreline formation, based on radiocarbon measurements from gastropod shells, are from approximately 18 to 15 cal ka. One key radiocarbon age on plant fragments from Swan Lake, which formed in the threshold spillway after overflow ceased, has been taken as a young limiting age. The conventional age of 12090 ± 300 14C when calibrated at 2σ has large uncertainty (13375–15103 cal BP). We report six new AMS radiocarbon ages recovered from new Swan Lake sediment cores. A twig near the base of lacustrine muds was dated at 11,615 ± 40 14C yr (13,350 to 13,560 cal BP). Age determinations on roots in that interval and deeper in the core are somewhat younger. These ages limit the last overflow of the Provo stand to earlier than ∼13.5 cal ka BP, consistent with the younger bound of the imprecise age reported by Bright. If conservative interpretations of sedimentation rates for the thick well-sorted sand interval below the lacustrine muds are correct and landscape change that resulted in damming of Swan Lake is accounted for, cessation of flow probably occurred before ∼14.5 cal ka BP.

CacyBP/SIP as a regulator of transcriptional responses in brain cells

PubMed Central

Kilanczyk, Ewa; Filipek, Anna; Hetman, Michal

2014-01-01

Summary The Calcyclin-Binding Protein/Siah-1-Interacting Protein (CacyBP/SIP) is highly expressed in the brain and was shown to regulate the β-catenin-driven transcription in thymocytes. Therefore, it was investigated whether in brain cells CacyBP/SIP might play a role as a transcriptional regulator. In BDNF- or forskolin-stimulated rat primary cortical neurons, overexpression of CacyBP/SIP enhanced transcriptional activity of the cAMP-response element (CRE). In addition, overexpressed CacyBP/SIP enhanced BDNF-mediated activation of the Nuclear Factor of Activated T-cells (NFAT) but not the Serum Response Element (SRE). These stimulatory effects required an intact C-terminal domain of CacyBP/SIP. Moreover, in C6 rat glioma cells, the overexpressed CacyBP/SIP enhanced activation of CRE- or NFAT- following forskolin- or serum stimulation, respectively. Conversely, knockdown of endogenous CacyBP/SIP reduced activation of CRE- and NFAT but not SRE. Taken together, these results indicate that CacyBP/SIP is a novel regulator of CRE- and NFAT-driven transcription. PMID:25163685

Biomarker evidence for increasing aridity in south-central India over the Holocene

NASA Astrophysics Data System (ADS)

Sarkar, S.; Wilkes, H.; Prasad, S.; Brauer, A.; Basavaiah, N.; Strecker, M. R.; Sachse, D.

2012-12-01

Summer monsoonal rainfall has played an important role in the development and sustenance of the largely agro-based economy in the Indian subcontinent in the recent past. A better understanding of past variations in monsoonal rainfall can therefore lead to an assessment of its potential impact on early human societies. However, our knowledge of spatiotemporal patterns of past monsoon strength, as inferred from proxy records, is limited due to the lack of high-resolution paleo-hydrological records from continental archives. Here, we reconstruct centennial-scale hydrological variability associated with changes in the intensity of the Indian Summer Monsoon based on a record of lipid biomarker abundances and compound-specific stable isotopic composition of a 10-m-long sediment core from saline-alkaline Lonar Lake, situated in the core 'monsoon zone' of south-central India. We identified three periods of distinct hydrology over the Holocene in south-central India. The period between 10.4 and 6.5 ka BP was characterized by a relatively high abundance of land-plant biomarkers, such as long-chain n-alkanes. The composition of these leaf-wax n-alkanes (weighted average of concentration of different chain-length n-alkanes, expressed as the ACL index) and their negative δ13C (-30‰ to -33 ‰) indicate the dominance of woody C3 vegetation in the catchment, and negative δD (-170‰ to -175‰) values argue for a wet period due to an intensified monsoon. Rapid fluctuations in abundance of both terrestrial and aquatic biomarkers between 6.5 and 4 ka BP indicate an unstable lake ecosystem, culminating in a transition to arid conditions. Higher ACL values and a pronounced shift to more positive δ13C values (up to -22‰) of leaf-wax n-alkanes over this period indicate a change of dominant vegetation to C4 grasses. Along with a 40‰ increase in leaf wax n-alkane δD values, which likely resulted from less rainfall and/or higher plant evapotranspiration, we interpret this period

Sea-level records at ~80 ka from tectonically stable platforms: Florida and Bermuda

USGS Publications Warehouse

Ludwig, K. R.; Muhs, D.R.; Simmons, K.R.; Halley, R.B.; Shinn, E.A.

1996-01-01

Studies from technically active coasts on New Guinea and Barbados have suggested that sea level at ???80 ka was significantly lower than present, whereas data from the Atlantic and Pacific coasts of North America indicate an ???80 ka sea level close to that of the present. We determined ages of corals from a shallow submerged reef off the Florida Keys and an emergent marine deposit on Bermuda. Both localities are on tectonically stable platforms distant from plate boundaries. Uranium-series ages show that corals at both localities grew during the ???80 ka sea-level highstand, and geologic data show that sea level at that time was no lower than 7-9 m below present (Florida) and may have been 1-2 m above present (Bermuda). The ice-volume discrepancy of the 80 ka sea-level estimates is greater than the volume of the Greenland or West Antarctic ice sheets. Comparison of our ages with high-latitude insolation values indicates that the sea-level stand near the present at ???80 ka could have been orbitally forced.

Effect of methylation on the side-chain pKa value of arginine.

PubMed

Evich, Marina; Stroeva, Ekaterina; Zheng, Yujun George; Germann, Markus W

2016-02-01

Arginine methylation is important in biological systems. Recent studies link the deregulation of protein arginine methyltransferases with certain cancers. To assess the impact of methylation on interaction with other biomolecules, the pKa values of methylated arginine variants were determined using NMR data. The pKa values of monomethylated, symmetrically dimethylated, and asymmetrically dimethylated arginine are similar to the unmodified arginine (14.2 ± 0.4). Although the pKa value has not been significantly affected by methylation, consequences of methylation include changes in charge distribution and steric effects, suggesting alternative mechanisms for recognition. © 2015 The Protein Society.

The preparation of BP single crystals by high pressure flux method

NASA Technical Reports Server (NTRS)

Kumashiro, Y.; Misawa, S.; Gonda, S.

1984-01-01

Single crystals of BP, a III-V compound semiconductor, were obtained by the high pressure flux method. Cu3P and Ni12P5 powders were used as the flux, and mixed with BP powder. Two kinds of mixtures were prepared: (1) 1.8g (BP) + 35 G (Cu3P) and (2) 1.7 g (BP) + 25 g (Ni12P5). They were compressed into pellets, heated at 1300 C for 24 h in an induction furnace under a pressure of 1 MPa using Ar-P2 gas, and slowly cooled to room temperature. In case (1), BP single crystals grew along the (III) plane, and in case (2) they grew as an aggregate of crystallites. The cathodoluminescence spectra of the synthetic BP crystals showed peaks near 680 nm (1.82 eV) for case (1), and 500 nm (2.47 eV) for case (2). By using the high pressure flux method conventional sized crystals were obtained in a relatively short time.

Improving Cry8Ka toxin activity towards the cotton boll weevil (Anthonomus grandis).

PubMed

Oliveira, Gustavo R; Silva, Maria C M; Lucena, Wagner A; Nakasu, Erich Y T; Firmino, Alexandre A P; Beneventi, Magda A; Souza, Djair S L; Gomes, José E; de Souza, José D A; Rigden, Daniel J; Ramos, Hudson B; Soccol, Carlos R; Grossi-de-Sa, Maria F

2011-09-09

The cotton boll weevil (Anthonomus grandis) is a serious insect-pest in the Americas, particularly in Brazil. The use of chemical or biological insect control is not effective against the cotton boll weevil because of its endophytic life style. Therefore, the use of biotechnological tools to produce insect-resistant transgenic plants represents an important strategy to reduce the damage to cotton plants caused by the boll weevil. The present study focuses on the identification of novel molecules that show improved toxicity against the cotton boll weevil. In vitro directed molecular evolution through DNA shuffling and phage display screening was applied to enhance the insecticidal activity of variants of the Cry8Ka1 protein of Bacillus thuringiensis. Bioassays carried out with A. grandis larvae revealed that the LC50 of the screened mutant Cry8Ka5 toxin was 3.15-fold higher than the wild-type Cry8Ka1 toxin. Homology modelling of Cry8Ka1 and the Cry8Ka5 mutant suggested that both proteins retained the typical three-domain Cry family structure. The mutated residues were located mostly in loops and appeared unlikely to interfere with molecular stability. The improved toxicity of the Cry8Ka5 mutant obtained in this study will allow the generation of a transgenic cotton event with improved potential to control A. grandis.

Improving Cry8Ka toxin activity towards the cotton boll weevil (Anthonomus grandis)

PubMed Central

2011-01-01

Background The cotton boll weevil (Anthonomus grandis) is a serious insect-pest in the Americas, particularly in Brazil. The use of chemical or biological insect control is not effective against the cotton boll weevil because of its endophytic life style. Therefore, the use of biotechnological tools to produce insect-resistant transgenic plants represents an important strategy to reduce the damage to cotton plants caused by the boll weevil. The present study focuses on the identification of novel molecules that show improved toxicity against the cotton boll weevil. In vitro directed molecular evolution through DNA shuffling and phage display screening was applied to enhance the insecticidal activity of variants of the Cry8Ka1 protein of Bacillus thuringiensis. Results Bioassays carried out with A. grandis larvae revealed that the LC50 of the screened mutant Cry8Ka5 toxin was 3.15-fold higher than the wild-type Cry8Ka1 toxin. Homology modelling of Cry8Ka1 and the Cry8Ka5 mutant suggested that both proteins retained the typical three-domain Cry family structure. The mutated residues were located mostly in loops and appeared unlikely to interfere with molecular stability. Conclusions The improved toxicity of the Cry8Ka5 mutant obtained in this study will allow the generation of a transgenic cotton event with improved potential to control A. grandis. PMID:21906288

EUReKA! A Conceptual Model of Emotion Understanding

PubMed Central

Castro, Vanessa L.; Cheng, Yanhua; Halberstadt, Amy G.; Grühn, Daniel

2015-01-01

The field of emotion understanding is replete with measures, yet lacks an integrated conceptual organizing structure. To identify and organize skills associated with the recognition and knowledge of emotions, and to highlight the focus of emotion understanding as localized in the self, in specific others, and in generalized others, we introduce the conceptual framework of Emotion Understanding in Recognition and Knowledge Abilities (EUReKA). We then categorize fifty-six existing methods of emotion understanding within this framework to highlight current gaps and future opportunities in assessing emotion understanding across the lifespan. We hope the EUReKA model provides a systematic and integrated framework for conceptualizing and measuring emotion understanding for future research. PMID:27594904

Home and Online Management and Evaluation of Blood Pressure (HOME BP) digital intervention for self-management of uncontrolled, essential hypertension: a protocol for the randomised controlled HOME BP trial

PubMed Central

Morton, Katherine; Stuart, Beth; Raftery, James; Bradbury, Katherine; Yao, Guiqing Lily; Zhu, Shihua; Little, Paul; Yardley, Lucy

2016-01-01

Introduction Self-management of hypertension, including self-monitoring and antihypertensive medication titration, lowers blood pressure (BP) at 1 year compared to usual care. The aim of the current trial is to assess the effectiveness of the Home and Online Management and Evaluation of Blood Pressure (HOME BP) intervention for the self-management of hypertension in primary care. Methods and analysis The HOME BP trial will be a randomised controlled trial comparing BP self-management—consisting of the HOME BP online digital intervention with self-monitoring, lifestyle advice and antihypertensive drug titration—with usual care for people with uncontrolled essential hypertension. Eligible patients will be recruited from primary care and randomised to usual care or to self-management using HOME BP. The primary outcome will be the difference in mean systolic BP (mm Hg) at 12-month follow-up between the intervention and control groups adjusting for baseline BP and covariates. Secondary outcomes (also adjusted for baseline and covariates where appropriate) will be differences in mean BP at 6 months and diastolic BP at 12 months; patient enablement; quality of life, and economic analyses including all key resources associated with the intervention and related services, adopting a broad societal perspective to include NHS, social care and patient costs, considered within trial and modelled with a lifetime horizon. Medication beliefs, adherence and changes; self-efficacy; perceived side effects and lifestyle changes will be measured for process analyses. Qualitative analyses will explore patient and healthcare professional experiences of HOME BP to gain insights into the factors affecting acceptability, feasibility and adherence. Ethics and dissemination This study has received NHS ethical approval (REC reference 15/SC/0082). The findings from HOME BP will be disseminated widely through peer-reviewed publications, scientific conferences and workshops. If

Experiments for Ka-band mobile applications: The ACTS mobile terminal

NASA Technical Reports Server (NTRS)

Estabrook, Polly; Dessouky, Khaled; Jedrey, Thomas

1990-01-01

To explore the potential of Ka-band to support mobile satellite services, the Jet Propulsion Laboratory (JPL) has initiated the design and development of a Ka-band land-mobile terminal to be used with the Advanced Communications Technology Satellite (ACTS). The planned experimental setup with ACTS is described. Brief functional descriptions of the mobile and fixed terminals are provided. The inputs required from the propagation community to support the design activities and the planned experiments are also discussed.

Validation of SARAL/AltiKa data in the Amazon basin

NASA Astrophysics Data System (ADS)

Santos da Silva, Joecila; Calmant, Stephane; Medeiros Moreira, Daniel; Oliveira, Robson; Conchy, Taina; Gennero, Marie-Claude; Seyler, Frederique

2015-04-01

SARAL/AltiKa is a link between past missions (since it flies on the ERS-ENVISAT orbit with Ku band nadir altimeters in LRM) and future missions such as SWOT's Ka band interferometry swaths. In the present study, we compare the capability of its altimeter AltiKa to that of previous missions working in the Ku band such as ENVISAT and Jason-2 in retrieving water levels over the Amazon basin. Same as for the aforementioned preceding missions, the best results were obtained with the ICE-1 retracking algorithm. We qualitatively analyze the impact of rainfalls in the loss of measurements. Since making long -multi mission- time series is of major importance either for hydro-climatic studies or for basin management, we also present an estimate of the altimeter bias in order that the SARAL series of water level can be appended to those of these previous missions.

Development of Methods for the Determination of pKa Values

PubMed Central

Reijenga, Jetse; van Hoof, Arno; van Loon, Antonie; Teunissen, Bram

2013-01-01

The acid dissociation constant (pKa) is among the most frequently used physicochemical parameters, and its determination is of interest to a wide range of research fields. We present a brief introduction on the conceptual development of pKa as a physical parameter and its relationship to the concept of the pH of a solution. This is followed by a general summary of the historical development and current state of the techniques of pKa determination and an attempt to develop insight into future developments. Fourteen methods of determining the acid dissociation constant are placed in context and are critically evaluated to make a fair comparison and to determine their applications in modern chemistry. Additionally, we have studied these techniques in light of present trends in science and technology and attempt to determine how these trends might affect future developments in the field. PMID:23997574

Risk Assessment of Mineral Groundwater Near Rogaška Slatina

NASA Astrophysics Data System (ADS)

Trcek, Branka; Leis, Albrecht

2017-10-01

Groundwater resources of mineral and thermo-mineral water are invaluable for planning a sustainable spatial and economic development of the Rogaška Slatina area, which requires a protection of this natural heritage. Numerous previous investigations of Rogaška groundwaters were subjects to balneology and to demands for larger exploitation quantities, that is why information are missing that are essential for definition of the Rogaška fractured aquifer system with mineral and thermo-mineral water and for its protection. The isotopic investigations of groundwaters stored in the Rogaška Slatina fractured aquifer system were performed aiming at answering open questions on the groundwater recharge and dynamics, on connections between different types of aquifers and on solute transport. Environmental isotopes 2H, 18O, 3H, 13C of dissolved inorganic carbon and 14C were analysed in mineral, thermo-mineral and spring waters. Results indicated the source and mechanism of groundwater recharge, its renewability, a transit time distribution, hydraulic interrelationships, the groundwater origin and its evolution due to effects of water-rock interaction. The mean residence time estimates of mineral and thermo- mineral water in the aquifer are between 3400 and 14000 years. On the other hand, the mixing processes between younger and older waters or mineral and spring waters are reflected as well as waters that infiltrated predominantly after the 1960s. These suggest the vulnerability of the research systems to man-made impacts. The presented results coupled with available information on a physical hydrogeology and water chemistry asses the optimal balance between the environmental protection and economic use of mineral water resources in the study area. They are essential for the protection strategy development of mineral and thermo-mineral water in the Rogaška Slatina area bringing together the state administration and local authorities and stakeholders.

Enhanced Expression of IL-18 and IL-18BP in Plasma of Patients with Eczema: Altered Expression of IL-18BP and IL-18 Receptor on Mast Cells.

PubMed

Hu, Yalin; Wang, Junling; Zhang, Huiyun; Xie, Hua; Song, Weiwei; Jiang, Qijun; Zhao, Nan; He, Shaoheng

2017-01-01

IL-18 has been found to be associated with eczema. However, little is known of the role of IL-18 binding protein (BP) and IL-18 receptor (R) in eczema. We therefore investigated the expression of IL-18, IL-18BP, and IL-18R on mast cells by using flow cytometry analysis and mouse eczema model. The results showed that plasma free IL-18 and free IL-18BP levels in eczema patients were higher than those in healthy controls. IL-18 provoked up to 3.1-fold increase in skin mast cells. IL-18 induced also an increase in IL-18BP+ mast cells, but a reduction of IL-18R+ mast cells in mouse eczema skin. It was found that house dust mite allergen Der p1 and egg allergen OVA induced upregulation of the expression of IL-18, IL-18BP, and IL-18R mRNAs in HMC-1 cells following 2 and 16 h incubation. In conclusion, correlation of IL-18 and IL-18BP in eczema plasma suggests an important balance between IL-18 and IL-18BP in eczema. The decrease in molar concentration ratio of plasma IL-18BP/IL-18 and allergen-induced upregulated expression of IL-18 and IL-18R in skin mast cells of the patients with eczema suggests that anti-IL-18 including IL-18BP therapy may be useful for the treatment of eczema.

Enhanced Expression of IL-18 and IL-18BP in Plasma of Patients with Eczema: Altered Expression of IL-18BP and IL-18 Receptor on Mast Cells

PubMed Central

2017-01-01

IL-18 has been found to be associated with eczema. However, little is known of the role of IL-18 binding protein (BP) and IL-18 receptor (R) in eczema. We therefore investigated the expression of IL-18, IL-18BP, and IL-18R on mast cells by using flow cytometry analysis and mouse eczema model. The results showed that plasma free IL-18 and free IL-18BP levels in eczema patients were higher than those in healthy controls. IL-18 provoked up to 3.1-fold increase in skin mast cells. IL-18 induced also an increase in IL-18BP+ mast cells, but a reduction of IL-18R+ mast cells in mouse eczema skin. It was found that house dust mite allergen Der p1 and egg allergen OVA induced upregulation of the expression of IL-18, IL-18BP, and IL-18R mRNAs in HMC-1 cells following 2 and 16 h incubation. In conclusion, correlation of IL-18 and IL-18BP in eczema plasma suggests an important balance between IL-18 and IL-18BP in eczema. The decrease in molar concentration ratio of plasma IL-18BP/IL-18 and allergen-induced upregulated expression of IL-18 and IL-18R in skin mast cells of the patients with eczema suggests that anti-IL-18 including IL-18BP therapy may be useful for the treatment of eczema. PMID:28839348

Reconstitution of the Recombinant RanBP2 SUMO E3 Ligase Complex.

PubMed

Ritterhoff, Tobias; Das, Hrishikesh; Hao, Yuqing; Sakin, Volkan; Flotho, Annette; Werner, Andreas; Melchior, Frauke

2016-01-01

One of the few proteins that have SUMO E3 ligase activity is the 358 kDa nucleoporin RanBP2 (Nup358). While small fragments of RanBP2 can stimulate SUMOylation in vitro, the physiologically relevant E3 ligase is a stable multi-subunit complex comprised of RanBP2, SUMOylated RanGAP1, and Ubc9. Here, we provide a detailed protocol to in vitro reconstitute the RanBP2 SUMO E3 ligase complex. With the exception of RanBP2, reconstitution involves untagged full-length proteins. We describe the bacterial expression and purification of all complex components, namely an 86 kDa His-tagged RanBP2 fragment, the SUMO E2-conjugating enzyme Ubc9, RanGAP1, and SUMO1, and we provide a protocol for quantitative SUMOylation of RanGAP1. Finally, we present details for the assembly and final purification of the catalytically active RanBP2/RanGAP1*SUMO1/Ubc9 complex.

TopBP1 deficiency impairs V(D)J recombination during lymphocyte development

PubMed Central

Kim, Jieun; Kyu Lee, Sung; Jeon, Yoon; Kim, Yehyun; Lee, Changjin; Ho Jeon, Sung; Shim, Jaegal; Kim, In-Hoo; Hong, Seokmann; Kim, Nayoung; Lee, Ho; Seong, Rho Hyun

2014-01-01

TopBP1 was initially identified as a topoisomerase II-β-binding protein and it plays roles in DNA replication and repair. We found that TopBP1 is expressed at high levels in lymphoid tissues and is essential for early lymphocyte development. Specific abrogation of TopBP1 expression resulted in transitional blocks during early lymphocyte development. These defects were, in major part, due to aberrant V(D)J rearrangements in pro-B cells, double-negative and double-positive thymocytes. We also show that TopBP1 was located at sites of V(D)J rearrangement. In TopBP1-deficient cells, γ-H2AX foci were found to be increased. In addition, greater amount of γ-H2AX product was precipitated from the regions where TopBP1 was localized than from controls, indicating that TopBP1 deficiency results in inefficient DNA double-strand break repair. The developmental defects were rescued by introducing functional TCR αβ transgenes. Our data demonstrate a novel role for TopBP1 as a crucial factor in V(D)J rearrangement during the development of B, T and iNKT cells. PMID:24442639

The MCM-associated protein MCM-BP is important for human nuclear morphology.

PubMed

Jagannathan, Madhav; Sakwe, Amos M; Nguyen, Tin; Frappier, Lori

2012-01-01

Mini-chromosome maintenance complex-binding protein (MCM-BP) was discovered as a protein that is strongly associated with human MCM proteins, known to be crucial for DNA replication in providing DNA helicase activity. The Xenopus MCM-BP homologue appears to play a role in unloading MCM complexes from chromatin after DNA synthesis; however, the importance of MCM-BP and its functional contribution to human cells has been unclear. Here we show that depletion of MCM-BP by sustained expression of short hairpin RNA (shRNA) results in highly abnormal nuclear morphology and centrosome amplification. The abnormal nuclear morphology was not seen with depletion of other MCM proteins and was rescued with shRNA-resistant MCM-BP. MCM-BP depletion was also found to result in transient activation of the G2 checkpoint, slowed progression through G2 and increased replication protein A foci, indicative of replication stress. In addition, MCM-BP depletion led to increased cellular levels of MCM proteins throughout the cell cycle including soluble MCM pools. The results suggest that MCM-BP makes multiple contributions to human cells that are not limited to unloading of the MCM complex.

BP-Broker use-cases in the UncertWeb framework

NASA Astrophysics Data System (ADS)

Roncella, Roberto; Bigagli, Lorenzo; Schulz, Michael; Stasch, Christoph; Proß, Benjamin; Jones, Richard; Santoro, Mattia

2013-04-01

The UncertWeb framework is a distributed, Web-based Information and Communication Technology (ICT) system to support scientific data modeling in presence of uncertainty. We designed and prototyped a core component of the UncertWeb framework: the Business Process Broker. The BP-Broker implements several functionalities, such as: discovery of available processes/BPs, preprocessing of a BP into its executable form (EBP), publication of EBPs and their execution through a workflow-engine. According to the Composition-as-a-Service (CaaS) approach, the BP-Broker supports discovery and chaining of modeling resources (and processing resources in general), providing the necessary interoperability services for creating, validating, editing, storing, publishing, and executing scientific workflows. The UncertWeb project targeted several scenarios, which were used to evaluate and test the BP-Broker. The scenarios cover the following environmental application domains: biodiversity and habitat change, land use and policy modeling, local air quality forecasting, and individual activity in the environment. This work reports on the study of a number of use-cases, by means of the BP-Broker, namely: - eHabitat use-case: implements a Monte Carlo simulation performed on a deterministic ecological model; an extended use-case supports inter-comparison of model outputs; - FERA use-case: is composed of a set of models for predicting land-use and crop yield response to climatic and economic change; - NILU use-case: is composed of a Probabilistic Air Quality Forecasting model for predicting concentrations of air pollutants; - Albatross use-case: includes two model services for simulating activity-travel patterns of individuals in time and space; - Overlay use-case: integrates the NILU scenario with the Albatross scenario to calculate the exposure to air pollutants of individuals. Our aim was to prove the feasibility of describing composite modeling processes with a high-level, abstract

76 FR 69713 - Application To Export Electric Energy; BP Energy Company

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-09

... DEPARTMENT OF ENERGY [OE Docket No. EA-314-A] Application To Export Electric Energy; BP Energy.... SUMMARY: BP Energy Company (BP Energy) has applied to renew its authority to transmit electric energy from... electric energy from the United States to Mexico as a power marketer for a five-year term using existing...

High-Efficiency Ka-Band Waveguide Two-Way Asymmetric Power Combiner

NASA Technical Reports Server (NTRS)

Wintucky, E. G.; Simons, R. N.; Freeman, J. C.; Chevalier, C. T.

2011-01-01

NASA is planning a number of Space Exploration, Earth Observation and Space Science missions where Ka-band solid-state power amplifiers (SSPAs) could have a role. Monolithic microwave integrated circuit (MMIC) based SSPAs with output powers on the order of 10 W at Ka-band frequencies would be adequate to satisfy the data transmission rate requirements at the distances involved. MMICs are a type of integrated circuit fabricated on a GaAs wafer, which operates at micro wave frequencies and performs the function of signal amplification. The highest power Ka-band (31.8 to 32.3 GHz) SSPA to have flown in space had an output power of 2.6 W with an overall efficiency of 14.3 percent. This SSPA was built around discrete GaAs pHEMT (high electron mobility transistor) devices and flew aboard the Deep Space One spacecraft. State-of-the-art GaAs pHEMT-based MMIC power amplifiers (PAs) can deliver RF power at Ka-band frequencies anywhere from 3 W with a power added efficiency (PAE) of 32 percent to 6 W with a PAE of 26 percent. However, to achieve power levels higher than 6 W, the output of several MMIC PAs would need to be combined using a high-efficiency power combiner. Conventional binary waveguide power combiners, based on short-slot and magic-T circuits, require MMIC PAs with identical amplitude and phase characteristics for high combining efficiency. However, due to manufacturing process variations, the output powers of the MMIC PAs tend to be unequal, and hence the need to develop unequal power combiners. A two-way asymmetric magic-T based power combiner for MMIC power amplifiers, which can take in unequal inputs, has been successfully designed, fabricated, and characterized over NASA s Deep Space Network (DSN) frequency range of 31.8 to 32.3 GHz. The figure is a transparent view of the a sym - metric combiner that shows the 4-port configuration and the internal structure. The rod, post, and iris are positioned by design to achieve the desired asymmetric power ratio

Social Metaphorical Mapping of the Concept of Force "CHI-KA-RA" in Japanese

ERIC Educational Resources Information Center

Suzuki, Mariko

2005-01-01

This research focused on the concept of "force" ("CHI-KA-RA" in Japanese) in Newtonian mechanics. The primary objective was to develop a tool, based on metaphor, to interpret student thinking in learning scientific topics. The study provides an example of using the tool to trace the process of mutual changes in thinking during a dialog among…

Reconstruction of the Late Quaternary Glaciation of the Macha Khola valley (Gorkha Himal, Nepal) using relative and absolute ( 14C, 10Be, dendrochronology) dating techniques

NASA Astrophysics Data System (ADS)

Zech, W.; Glaser, B.; Abramowski, U.; Dittmar, C.; Kubik, P. W.

2003-11-01

Late Quaternary glacier fluctuations in the Macha Khola valley (Gorkha Himal, Nepal) were reconstructed using relative and absolute dating techniques. Our results indicate that younger moraine complexes were left by Late Holocene (<1.7 cal. ka BP), mid-Holocene (ca 3 cal. ka BP), and Lateglacial (ca 13 cal. ka BP) ice advances. Older Late Quaternary glacier advances occurred during Marine Oxygen Isotope Stages (MIS) 2 and 3-4. No relics of Middle or Early Pleistocene glaciations could be found. During MIS 3-4, glaciers advanced down to an altitude of at least 2150 m a.s.l., corresponding to an ELA depression of approximately 1300 m. At about 3500 m a.s.l., the MIS 2 Macha Khola glacier reached almost the thickness of the former MIS 3-4 glacier and retreated some time before 17.9 cal. ka BP. The Lateglacial glacier advanced again several times to altitudes between 2450 and 3400 m a.s.l. The mid-Holocene glaciers extended much farther down-valley than the Late Holocene ones. Dendrochronological data of Abies spectabilis suggested several periods of unfavourable growth conditions especially at the beginning of the 19th (1820) and 20th (1905) centuries.

Constitutive expression of transgenes encoding derivatives of the synthetic antimicrobial peptide BP100: impact on rice host plant fitness.

PubMed

Nadal, Anna; Montero, Maria; Company, Nuri; Badosa, Esther; Messeguer, Joaquima; Montesinos, Laura; Montesinos, Emilio; Pla, Maria

2012-09-04

The Biopeptide BP100 is a synthetic and strongly cationic α-helical undecapeptide with high, specific antibacterial activity against economically important plant-pathogenic bacteria, and very low toxicity. It was selected from a library of synthetic peptides, along with other peptides with activities against relevant bacterial and fungal species. Expression of the BP100 series of peptides in plants is of major interest to establish disease-resistant plants and facilitate molecular farming. Specific challenges were the small length, peptide degradation by plant proteases and toxicity to the host plant. Here we approached the expression of the BP100 peptide series in plants using BP100 as a proof-of-concept. Our design considered up to three tandemly arranged BP100 units and peptide accumulation in the endoplasmic reticulum (ER), analyzing five BP100 derivatives. The ER retention sequence did not reduce the antimicrobial activity of chemically synthesized BP100 derivatives, making this strategy possible. Transformation with sequences encoding BP100 derivatives (bp100der) was over ten-fold less efficient than that of the hygromycin phosphotransferase (hptII) transgene. The BP100 direct tandems did not show higher antimicrobial activity than BP100, and genetically modified (GM) plants constitutively expressing them were not viable. In contrast, inverted repeats of BP100, whether or not elongated with a portion of a natural antimicrobial peptide (AMP), had higher antimicrobial activity, and fertile GM rice lines constitutively expressing bp100der were produced. These GM lines had increased resistance to the pathogens Dickeya chrysanthemi and Fusarium verticillioides, and tolerance to oxidative stress, with agronomic performance comparable to untransformed lines. Constitutive expression of transgenes encoding short cationic α-helical synthetic peptides can have a strong negative impact on rice fitness. However, GM plants expressing, for example, BP100 based on inverted

Test results of 12/18 kA ReBCO coated conductor current leads

NASA Astrophysics Data System (ADS)

Kovalev, I. A.; Surin, M. I.; Naumov, A. V.; Novikov, M. S.; Novikov, S. I.; Ilin, A. A.; Polyakov, A. V.; Scherbakov, V. I.; Shutova, D. I.

2017-07-01

A pair of hybrid current leads (brass + stacked & soldered ReBCO tapes) rated for 12 kA in steady state and for up to 18 kA at pulsed over current conditions was designed, developed and tested at NRC ;Kurchatov Institute; (NRC ;KI;). During the experiment at LN2 temperature, the current leads (CLs) were successfully charged with 18 kA at 100 A/s ramp rate. To date, as far as we know, this is the highest current capacity achieved for 2G HTS current leads. The feasibility of ;stack-and-soldering technique; for 10 kA+ class coated conductor CLs for accelerators and fusion was demonstrated. This paper gives an overview of the leads design and presents the preliminary test results. Detailed studies of magnetic properties and current sharing process for the stacked and staggered HTS joints are also reported.

Holocene South Asian Monsoon Climate Change - Potential Mechanisms and Effects on Past Civilizations

NASA Astrophysics Data System (ADS)

Staubwasser, M.; Sirocko, F.; Grootes, P. M.; Erlenkeuser, H.; Segl, M.

2002-12-01

Planktonic oxygen isotope ratios from the laminated sediment core 63KA off the river Indus delta dated with 80 AMS radiocarbon ages reveal significant climate changes in the south Asian monsoon system throughout the Holocene. The most prominent event of the early-mid Holocene occurred after 8.4 ka BP and is within dating error of the GISP/GRIP event centered at 8.2 ka BP. The late Holocene is generally more variable, and shows non-periodic cycles in the multi-centennial frequency band. The largest change of the entire Holocene occurred at 4.2 ka BP and is concordant with the end of urban Harappan civilization in the Indus valley. Opposing isotopic trends across the northern Arabian Sea surface indicate a reduction in Indus river discharge at that time. Consequently, sustained drought may have initiated the archaeologically recorded interval of southeastward habitat tracking within the Harappan cultural domain. The hemispheric significance of the 4.2 ka BP event is evident from concordant climate change in the eastern Mediterranean and the Middle East. The late Holocene cycles in South Asia, which most likely represent drought cycles, vary between 250 and 800 years and are coherent with the evolution of cosmogenic radiocarbon production rates in the atmosphere. This suggests that solar variability is the fundamental cause behind late Holocene rainfall changes at least over south Asia.

High resolution dating of moraines on Kodiak Island, Alaska links Atlantic and North Pacific climatic changes during the late glacial

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mann, D.H.

1992-01-01

Much less is known about the paleoclimate and paleoceanography of the North Pacific than the North Atlantic despite the North Pacific's important role in the global ocean-climate system. Kodiak Island lies in the northwestern Gulf of Alaska astride the eastern end of the Aleutian Low. On southwestern Kodiak Island, coastal bluffs section a series of moraines, kettle ponds, and bogs formed between 15 and 9 ka BP. Distinctive tephras from volcanoes on the Alaska Peninsula provide time-lines within the stratigraphy. Deformation events recorded in sediment stacks from basins within glaciotectonic landforms allows precise dating of glacial events. An ice capmore » occupied the Kodiak archipelago during the last glaciation. Three glacial advances of the southwestern margin of this ice cap occurred after 15 ka BP. At 13.4 ka, piedmont ice lobes formed large push moraines extending into Shelikof Strait during the Low Cape Advance. The less-extensive Tundra Advance culminated between 12 and 11.7 ka BP followed by glacier retreat then readvance to form the prominent Olga Moraine system between 11 and 10 ka BP. The timing of the Tundra and Olga Advances correlates closely with that of the Older and Younger Dryas cold episodes in northwestern Europe suggesting that these climatic oscillations were synchronous throughout the northern hemisphere.« less

100-kA vacuum current breaker of a modular design

NASA Astrophysics Data System (ADS)

Ivanov, V. P.; Vozdvijenskii, V. A.; Jagnov, V. A.; Solodovnikov, S. G.; Mazulin, A. V.; Ryjkov, V. M.

1994-05-01

Direct current breaker of a modular design is developed for the strong field tokamak power supply system. The power supply system comprises four 800 MW alternative current generators with 4 GJ flywheels, thyristor rectifiers providing inductive stores pumping by a current up to 100 kA for 1 - 4 sec. To form current pulses of various shapes in the tokamak windings current breakers are used with either pneumatic or explosive drive, at a current switching synchronously of not worse than 100 mks. Current breakers of these types require that the current conducting elements be replaced after each shot. For recent years vacuum arc quenching chambers with an axial magnetic field are successfully employed as repetitive performance current breakers, basically for currents up to 40 kA. In the report some results of researches of a vacuum switch modular are presented which we used as prototype switch for currents of the order of 100 kA.

Palaeocirculation across New Zealand during the last glacial maximum at ˜21 ka

NASA Astrophysics Data System (ADS)

Lorrey, Andrew M.; Vandergoes, Marcus; Almond, Peter; Renwick, James; Stephens, Tom; Bostock, Helen; Mackintosh, Andrew; Newnham, Rewi; Williams, Paul W.; Ackerley, Duncan; Neil, Helen; Fowler, Anthony M.

2012-03-01

What circulation pattern drove Southern Alps glacial advances at ˜21 ka? Late 20th century glacial advances in New Zealand are commonly attributed to a dual precipitation increase and cooler than normal temperatures associated with enhanced westerly flow that occur under synoptic pressure patterns termed 'zonal' regimes (Kidson, 2000). But was the circulation pattern that supported major Southern Alps glacial advances during the global LGM similar to the modern analog? Here, a Regional Climate Regime Classification (RCRC) time slice was used to infer past circulation for New Zealand during the LGM at ˜21 ka. Palaeoclimate information that supported the construction of the ˜21 ka time slice was derived from the NZ-INTIMATE Climate Event Stratigraphy (CES), one new Auckland maar proxy record, and additional low-resolution data sourced from the literature. The terrestrial evidence at ˜21 ka implicates several possibilities for past circulation, depending on how interpretations for some proxies are made. The interpretation considered most tenable for the LGM, based on the agreement between terrestrial evidence, marine reconstructions and palaeoclimate model results is an 'anticyclonic/zonal' circulation regime characterized by increased influences from blocking 'highs' over the South Island during winter and an increase in zonal and trough synoptic types (with southerly to westerly quarter wind flow) during summer. These seasonal circulation traits would have generated lower mean annual temperatures, cooler than normal summer temperatures, and overall lower mean annual precipitation for New Zealand (particularly in the western South Island) at ˜21 ka. The anticyclonic/zonal time slice reconstruction presented in this study has different spatial traits than the late 20th Century and the early Little Ice Age signatures, suggesting more than one type of regional circulation pattern can drive Southern Alps glacial activity. This finding lends support to the hypothesis

Sea surface temperatures in the North Atlantic Ocean from 30ka to 10ka

NASA Astrophysics Data System (ADS)

Barrack, Kerr; Greenop, Rosanna; Burke, Andrea; Barker, Stephen; Chalk, Thomas; Crocker, Anya

2016-04-01

Some of the most striking features of the Late Pleistocene interval are the rapid changes in climate between warmer interstadial and cold stadial periods which, when coupled, are termed Dansgaard-Oeschger (D-O) events. This shift between warm and cold climates has been interpreted to result from changes in the thermohaline circulation (Broecker et al., 1985) triggered by, for instance, freshwater input from the collapse of the Laurentide ice sheet (Zahn et al., 1997). However, a recent study suggests that major ice rafting events cannot be the 'trigger' for the centennial to millennial scale cooling events identified over the past 500kyr (Barker at al., 2015). Polar planktic foraminiferal and lithogenic/terrigenous grain counts reveal that the southward migration of the polar front occurs before the deposition of ice rafted debris and therefore the rafting of ice during stadial periods. Based upon this evidence, Barker et al. suggest that the transition to a stadial state is a non-linear response to gradual cooling in the region. In order to test this hypothesis, our study reconstructs sea surface temperature across D-O events and the deglaciation in the North Atlantic between 30ka and 10ka using Mg/ Ca paleothermometry in Globigerina bulloides at ODP Sites 980 and 983 (the same sites as used in Barker et al., 2015) with an average sampling resolution of 300 years. With our new record we evaluate the timing of surface ocean temperature change, frontal shift movement, and ice rafting to investigate variations in the temperature gradient across the polar front over D-O events. References: Barker, S., Chen, J., Gong, X., Jonkers, L., Knorr, G., Thornalley, D., 2015. Icebergs not the trigger for North Atlantic cold events. Nature, 520(7547), pp.333-336. Broecker, W.S., Peteer, D.M., Rind, D., 1985. Does the ocean-atmosphere system have more than one stable mode of operation? Nature, 315 (6014), pp.21-26. Zahn, R., Schönfeld, J., Kudrass, H.-R., Park, M

Intensive Versus Standard Blood Pressure Control in SPRINT-Eligible Participants of ACCORD-BP.

PubMed

Buckley, Leo F; Dixon, Dave L; Wohlford, George F; Wijesinghe, Dayanjan S; Baker, William L; Van Tassell, Benjamin W

2017-12-01

We sought to determine the effect of intensive blood pressure (BP) control on cardiovascular outcomes in participants with type 2 diabetes mellitus (T2DM) and additional risk factors for cardiovascular disease (CVD). This study was a post hoc, multivariate, subgroup analysis of ACCORD-BP (Action to Control Cardiovascular Risk in Diabetes Blood Pressure) participants. Participants were eligible for the analysis if they were in the standard glucose control arm of ACCORD-BP and also had the additional CVD risk factors required for SPRINT (Systolic Blood Pressure Intervention Trial) eligibility. We used a Cox proportional hazards regression model to compare the effect of intensive versus standard BP control on CVD outcomes. The "SPRINT-eligible" ACCORD-BP participants were pooled with SPRINT participants to determine whether the effects of intensive BP control interacted with T2DM. The mean baseline Framingham 10-year CVD risk scores were 14.5% and 14.8%, respectively, in the intensive and standard BP control groups. The mean achieved systolic BP values were 120 and 134 mmHg in the intensive and standard BP control groups ( P < 0.001). Intensive BP control reduced the composite of CVD death, nonfatal myocardial infarction (MI), nonfatal stroke, any revascularization, and heart failure (hazard ratio 0.79; 95% CI 0.65-0.96; P = 0.02). Intensive BP control also reduced CVD death, nonfatal MI, and nonfatal stroke (hazard ratio 0.69; 95% CI 0.51-0.93; P = 0.01). Treatment-related adverse events occurred more frequently in participants receiving intensive BP control (4.1% vs. 2.1%; P = 0.003). The effect of intensive BP control on CVD outcomes did not differ between patients with and without T2DM ( P > 0.62). Intensive BP control reduced CVD outcomes in a cohort of participants with T2DM and additional CVD risk factors. © 2017 by the American Diabetes Association.

Surface Nutrient Utilisation and Productivity During Glacial-Interglacial Periods from the Equatorial Indian Ocean

NASA Astrophysics Data System (ADS)

R, C. K.; Bhushan, R.; Agnihotri, R.; Sawlani, R.; Jull, A. J. T.

2016-12-01

Seawaters and underlying sediments off Sri Lanka provide a unique marine realm affected by both branches of Northern Indian Ocean i.e. Arabian Sea (AS) and Bay of Bengal (BOB). AS and BOB are known for their distinct response to southwest monsoon. AS experiencing mainly winds and upwelling while BOB receives precipitation driven surface runoff from the Indian sub-continent. Multiple proxies were measured on a radiocarbon dated sediment core raised off Sri Lanka; their down core variations were used to understand oceanic history (nutrient utilisation, surface productivity, nature of organic matter) spanning last glacial-interglacial cycle ( 26 to 2.5 ka BP). Variations in CaCO3, biogenic silica (BSi) and δ15N from 26 ka to 12.5 ka BP indicate the region was experiencing high surface productivity with probably reduced surface nutrient utilisation efficiency. Sedimentary δ15N depth profile is decoupled from down core variations of major productivity indices (e.g. CaCO3, OC), hinting plausibly partial utilization of nutrients in the mixed layer (photic zone). δ13C of OC and C/N (wt. ratio) clearly reveal the terrestrial origin of organic matter at 15 ka BP, a period known for witnessing onset of deglaciation in northern hemisphere. δ13C minimum at 9 ka BP indicates intense monsoonal activity during this time coinciding well with solar insolation (June) maximum of the northern hemisphere. With the onset of Holocene ( 11 ka BP), δ15N variations appear to correlate with BSi and Ba/Ti indicating enhanced utilization of available nutrients at surface. Suggesting surface productivity over the region was probably micro-nutrient limited. The increased inventory of terrestrial runoff in Holocene probably demonstrates enhanced carbon sequestration capability of the region.

Source of the Organic Matter and Land-Marine Interaction Phases in Great Rann of Kachch Basin, India

NASA Astrophysics Data System (ADS)

Khonde, N. N.; Bhushan, R.; Agnihotri, R.; Maurya, D. M.; Chamyal, L. S.

2017-12-01

Using δ13C and C/N ratio of sedimentary organic matter (OM) in 14C AMS dated sediment core from central Great Rann of Kachchh (GRK) basin, we track sediment dispositional history since 18 ka BP. Temporal changes in the δ13C and C/N ratios were inferred in terms of OM source, which could be function of river discharge, relative sea level changes, and also due to land-cover changes in the catchment area. The down core variations in TOC vs TC doesn't show significant correlation suggesting diverse origin of the OM in GRK sediments. Between 18-13 ka BP, pulses of high C/N ratio (18-34) and depleted δ13C (average -23‰; with respect to typical marine -21‰) values hint terrestrially derived OM in rather overall marine environment. High terrestrial OM input from riverine inputs in post glacial period could be relatable to intense monsoonal conditions. Later to this phase, between 14-10 ka BP, C/N ratios show large fluctuations indicating rapidly fluctuating environment, albeit δ13C remains relatively stable at -21‰ typical of marine OM. A significant positive incursion in C/N ratio (45-60) is seen during early-mid Holocene time ( 10-6 ka BP) with and highly depleted δ13C ( -25‰) values indicating enhanced terrestrial OM input. This could be owing to increased riverine fluxes to the basin under intensified monsoonal climate. Between 6-2.5 ka BP during mid-Holocene, C/N ratios shows declining trend with enriched δ13C values, suggesting presence of marine OM source at the core-site. This overlaps with the weaker monsoonal conditions prevailing in the northwest India. Lake records from Rajasthan also support this contention. After 2.5 ka BP, C/N ratios indicate marine OM values, whereas δ13C fluctuates from marine to terrestrial values indicating `mixed-source' of the OM during this period, most likely due to unstable land-marine conditions and large-scale reworking of sediments.

A geochronological approach for cave evolution in the Cantabrian Coast (Pindal Cave, NW Spain)

USGS Publications Warehouse

Jimenez-Sanchez, M.; Bischoff, J.L.; Stoll, H.; Aranburu, A.

2006-01-01

Some of the oldest speleothems in the North Cantabrian Coast (Spain) are reported for the first time in this work. Pindal Cave is developed at 24 m above sea level, in a karstic massif reaching its highest surface in a marine terrace (rasa) located at 50-64 m above the present sea level. Several phases of evolution were previously recognized into the cave, including block collapse of the roof, episodic flooding and detrital sedimentation, and chemical precipitation of at least four speleothem generations over both alluvial and collapse deposits. Three of these speleothem generations have been dated by U/Th. The first generation yielded ages from 124,2 ?? 1, 5 ka BP to 73,1 ?? 0,9 ka BP, giving a minimum age for the main detritic sediments in the cave. The second one is not dated. The third generation gives an age of 3,71 ?? 0,4 ka BP (mathematically corrected to 2.7 ?? 0.5 ka BP), while for the youngest generation, with actively growing stalagmites in the cave, basal ages of 200 years BP are estimated by counting annual laminae. The data suggest a tentative maximum elevation rate close to 0, 2 mm/yr for the Cantabrian Margin in this area, although further chronological studies will be needed to check this hypothesis. ?? 2006 Gebru??der Borntraeger.

NASA's Evolution to Ka-Band Space Communications for Near-Earth Spacecraft

NASA Technical Reports Server (NTRS)

McCarthy, Kevin; Stocklin, Frank; Geldzahler, Barry; Friedman, Daniel; Celeste, Peter

2010-01-01

This slide presentation reviews the exploration of NASA using a Ka-band system for spacecraft communications in Near-Earth orbits. The reasons for changing to Ka-band are the higher data rates, and the current (X-band spectrum) is becoming crowded. This will require some modification to the current ground station antennas systems. The results of a Request for Information (RFI) are discussed, and the recommended solution is reviewed.

Coherent monsoonal changes in the northern tropics revealed by Chadian lakes (L. Chad and Yoa) sedimentary archives during the African Humid Period

NASA Astrophysics Data System (ADS)

Sylvestre, Florence; Kroepelin, Stefan; Pierre, Deschamps; Christine, Cocquyt; Nicolas, Waldmann; Kazuyo, Tachikawa; Amaral Paula, Do; Doriane, Delanghe; Guillaume, Jouve; Edouard, Bard; Camille, Bouchez; Jean-Claude, Doumnang; Jean-Charles, Mazur; Martin, Melles; Guillemette, Menot; Frauke, Rostek; Nicolas, Thouveny; Volkner, Wennrich

2016-04-01

In northern African tropics, it is now well established that the Last Glacial Maximum (LGM) was extremely dry followed by a wetter Holocene. Numerous palaeolake records reveal a fairly consistent pattern of a moister early Holocene resulting in a green Sahara followed by the onset of aridification about 4000 years ago. These palaeoenvironmental conditions are deciphered from several continental records distributed over the sub-Saharan zone and including diverse environments. However, pronounced differences in the timing and amplitude of these moisture changes inferred from sedimentary records point to both regional climatic variability change and site-specific influences of local topographic-hydrogeological factors which biased the evolution of water balance reconstructed from individual lacustrine archives. Here we present hydrological reconstructions from Chadian lakes, i.e. Lake Chad (c. 13°N) and Lake Yoa (19°N). Because of their location, both records allow to reconstruct lake level fluctuations and environmental changes according to a gradient from Sahelian to Saharan latitudes. Whereas Lake Chad is considered as a good sensor of climatic changes because of its large drainage basin covering 610,000 km2 in the Sudanian belt, Lake Yoa logs the northern precipitation changes in the Sahara. Combining sedimentological (laser diffraction grain size) and geochemical (XRF analysis) data associated with bio-indicators proxies (diatoms, pollen), we compare lake-level fluctuations and environmental changes during the last 12,000 years. After the hyperarid Last Glacial Maximum period during which dunes covered the Lake Chad basin, both lake records indicate an onset of more humid conditions between 12.5-11 ka cal BP. These resulted in lacustrine transgressions approaching their maximum extension at c. 10.5 ka cal BP. The lacustrine phase was probably interrupted by a relatively short drying event occurring around 8.2 ka cal BP which is well-defined in Lake Yoa by

pKa based protonation states and microspecies for protein-ligand docking

NASA Astrophysics Data System (ADS)

ten Brink, Tim; Exner, Thomas E.

2010-11-01

In this paper we present our reworked approach to generate ligand protonation states with our structure preparation tool SPORES (Structure PrOtonation and REcognition System). SPORES can be used for the preprocessing of proteins and protein-ligand complexes as e.g. taken from the Protein Data Bank as well as for the setup of 3D ligand databases. It automatically assigns atom and bond types, generates different protonation, tautomeric states as well as different stereoisomers. In the revised version, pKa calculations with the ChemAxon software MARVIN are used either to determine the likeliness of a combinatorial generated protonation state or to determine the titrable atoms used in the combinatorial approach. Additionally, the MARVIN software is used to predict microspecies distributions of ligand molecules. Docking studies were performed with our recently introduced program PLANTS (Protein-Ligand ANT System) on all protomers resulting from the three different selection methods for the well established CCDC/ASTEX clean data set demonstrating the usefulness of especially the latter approach.

Rain Fade Compensation Alternatives for Ka Band Communication Satellites

NASA Technical Reports Server (NTRS)

Acosta, Roberto J.

1997-01-01

Future satellite communications systems operating in Ka-band frequency band are subject to degradation produced by the troposphere which is much more severe than those found at lower frequency bands. These impairments include signal absorption by rain, clouds and gases, and amplitude scintillation's arising from refractive index irregularities. For example, rain attenuation at 20 GHz is almost three times that at 11 GHz. Although some of these impairments can be overcome by oversizing the ground station antennas and high power amplifiers, the current trend is using small (less than 20 inches apertures), low-cost ground stations (less than $1000) that can be easily deployed at user premises. As a consequence, most Ka-band systems are expected to employ different forms of fade mitigation that can be implemented relatively easily and at modest cost. The rain fade mitigation approaches are defined by three types of Ka-band communications systems - a low service rate (less than 1.5 Mb/s), a moderate service rate (1.5 to 6 Mb/s) system and a high service rate (greater than 43 Mb/s) system. The ACTS VSAT network, which includes an adaptive rain fade technique, is an example of a moderate service rate.

Reverberation Mapping of the Kepler target KA1858+48

NASA Astrophysics Data System (ADS)

Pei, Liuyi; Barth, A. J.; Malkan, M. A.; Cenko, S. B.; Clubb, K. I.; Filippenko, A. V.; Gates, E. L.; Horst, J.; Joner, M. D.; Leonard, D. C.; Sand, D. J.

2013-01-01

KA1858+48 is a Seyfert 1 galaxy at redshift 0.078 and is among the brightest active galaxies being monitored by the Kepler mission. We have carried out a reverberation mapping program designed to measure the broad-line region size and estimate the mass of the black hole in KA1858+48. We obtained spectroscopic data using the Kast Spectrograph at the Lick 3 m telescope during dark runs from late winter through fall of 2012, by requesting an observation on each night that the Kast Spectrograph was mounted on the telescope. We also obtained V-band images from the Nickel 1 m telescope at Lick Observatory, the 0.9 m telescope at Brigham Young University West Mountain Observatory, the Faulkes Telescope North at the Las Cumbres Observatory Global Telescope, the KAIT telescope at Lick Observatory, and the 1 m telescope at Mt. Laguna Observatory. The H-beta light curve shows a lag time of approximately 12 days with respect to the V-band continuum flux variations. We will present the continuum and emission-line light curves, cross-correlation lag measurements, and a preliminary estimate of the black hole mass in KA1858+48.

[Clinical significance of NS1-BP expression in esophageal squamous cell carcinoma].

PubMed

Ren, K; Qian, D; Wang, Y W; Pang, Q S; Zhang, W C; Yuan, Z Y; Wang, P

2018-01-23

Objective: To investigate the clinical significance of NS1-BP expression in patients with esophageal squamous cell carcinoma (ESCC), and to study the roles of NS1-BP in proliferation and apoptosis of ESCC cells. Methods: A total of 98 tumor tissues and 30 adjacent normal tissues from 98 ESCC patients were used as study group and control group, and these samples were collected in Sun Yat-Sen University Cancer Center between 2002 and 2008. In addition, 46 ESCC tissues which were collected in Cancer Institute and Hospital of Tianjin Medical University were used as validation group. Expression of mucosal NS1-BP was detected by immunohistochemistry. Kaplan-Meier curve and log-rank test were used to analyze the survival rate. Multivariate Cox proportional hazard model was used to analyze the prognostic factors. Furthermore, NS1-BP was over expressed or knocked down in ESCC cells by transient transfection. Protein levels of c-Myc were detected by western blot. Cell viability and apoptosis was analyzed by MTT assay and flow cytometry. Results: Among all of tested samples, NS1-BP were down-regulated in 9 out of 30 non-tumorous normal esophageal tissues (30.0%) and 85 out of 144 ESCC tissues (59.0%), respectively, showing a statistically significant difference ( P =0.012). In the study group, three-year disease-free survival rate of NS1-BP high expression group (53.2%) was significantly higher than that of NS1-BP low expression group (27.6%; P =0.009). In the validation group, the three-year disease-free survival rates were 57.8% and 25.5% in NS1-BP high and low levels groups, respectively, showing a similar results ( P =0.016). Importantly, multivariate analyses showed that low expression of NS1-BP was an independent predictor for chemoradiotherapy sensitivity and shorter disease-free survival time in ESCC patients( P <0.05 for all). Furthermore, overexpressed NS1-BP in TE-1 cells repressed c-Myc expression, inhibited cell proliferation and promoted apoptosis. In contrast

Dating of the Basal Aurignacian Sandwich at Abric Romanı́ (Catalunya, Spain) by Radiocarbon and Uranium-Series

USGS Publications Warehouse

Bischoff, James L.; Ludwig, Kenneth R.; Garcia, Jose Francisco; Carbonell, E.; Vaquero, Manola; Stafford, Thomas W.; Jull, A.J.T.

1994-01-01

Abric Romani{dotless}??, a rock shelter located near Barcelona, Spain, contains a charcoal-bearing basal Aurignacian occupation level sandwiched between beds of moss-generated carbonate. The Aurignacian culture is the oldest artefact industry in Europe with which anatomically modern human remains have been associated. Radiocarbon analysis of charcoal fragments by accelerator mass spectrometry (AMS) dates the basal Aurignacian to about 37 ?? 2 ka bp. U-series analyses by alpha spectrometry (AS) and mass spectrometry (MS) date the enclosing carbonate to 43 ?? 1 ka bp. These results confirm the great antiquity of the Aurignacian in northern Spain and support the similar AMS dates from El Castillo and l'Arbreda caves. They also show that radiocarbon dates are significantly younger than U-series at 40 ka bp, as predicted by theory. ?? 1994 Academic Press. All rights reserved.

Computer Aided Design of Ka-Band Waveguide Power Combining Architectures for Interplanetary Spacecraft

NASA Technical Reports Server (NTRS)

Vaden, Karl R.

2006-01-01

Communication systems for future NASA interplanetary spacecraft require transmitter power ranging from several hundred watts to kilowatts. Several hybrid junctions are considered as elements within a corporate combining architecture for high power Ka-band space traveling-wave tube amplifiers (TWTAs). This report presents the simulated transmission characteristics of several hybrid junctions designed for a low loss, high power waveguide based power combiner.

A new BP Fourier algorithm and its application in English teaching evaluation

NASA Astrophysics Data System (ADS)

Pei, Xuehui; Pei, Guixin

2017-08-01

BP neural network algorithm has wide adaptability and accuracy when used in complicated system evaluation, but its calculation defects such as slow convergence have limited its practical application. The paper tries to speed up the calculation convergence of BP neural network algorithm with Fourier basis functions and presents a new BP Fourier algorithm for complicated system evaluation. First, shortages and working principle of BP algorithm are analyzed for subsequent targeted improvement; Second, the presented BP Fourier algorithm adopts Fourier basis functions to simplify calculation structure, designs new calculation transfer function between input and output layers, and conducts theoretical analysis to prove the efficiency of the presented algorithm; Finally, the presented algorithm is used in evaluating university English teaching and the application results shows that the presented BP Fourier algorithm has better performance in calculation efficiency and evaluation accuracy and can be used in evaluating complicated system practically.

A unified framework for modelling sediment fate from source to sink and its interactions with reef systems over geological times.

PubMed

Salles, Tristan; Ding, Xuesong; Webster, Jody M; Vila-Concejo, Ana; Brocard, Gilles; Pall, Jodie

2018-03-27

Understanding the effects of climatic variability on sediment dynamics is hindered by limited ability of current models to simulate long-term evolution of sediment transfer from source to sink and associated morphological changes. We present a new approach based on a reduced-complexity model which computes over geological time: sediment transport from landmasses to coasts, reworking of marine sediments by longshore currents, and development of coral reef systems. Our framework links together the main sedimentary processes driving mixed siliciclastic-carbonate system dynamics. It offers a methodology for objective and quantitative sediment fate estimations over regional and millennial time-scales. A simulation of the Holocene evolution of the Great Barrier Reef shows: (1) how high sediment loads from catchments erosion prevented coral growth during the early transgression phase and favoured sediment gravity-flows in the deepest parts of the northern region basin floor (prior to 8 ka before present (BP)); (2) how the fine balance between climate, sea-level, and margin physiography enabled coral reefs to thrive under limited shelf sedimentation rates after ~6 ka BP; and, (3) how since 3 ka BP, with the decrease of accommodation space, reduced of vertical growth led to the lateral extension of reefs consistent with available observational data.

Design and Validation of High Date Rate Ka-Band Software Defined Radio for Small Satellite

NASA Technical Reports Server (NTRS)

Xia, Tian

2016-01-01

The Design and Validation of High Date Rate Ka- Band Software Defined Radio for Small Satellite project will develop a novel Ka-band software defined radio (SDR) that is capable of establishing high data rate inter-satellite links with a throughput of 500 megabits per second (Mb/s) and providing millimeter ranging precision. The system will be designed to operate with high performance and reliability that is robust against various interference effects and network anomalies. The Ka-band radio resulting from this work will improve upon state of the art Ka-band radios in terms of dimensional size, mass and power dissipation, which limit their use in small satellites.

BP fusion model for the detection of oil spills on the sea by remote sensing

NASA Astrophysics Data System (ADS)

Chen, Weiwei; An, Jubai; Zhang, Hande; Lin, Bin

2003-06-01

Oil spills are very serious marine pollution in many countries. In order to detect and identify the oil-spilled on the sea by remote sensor, scientists have to conduct a research work on the remote sensing image. As to the detection of oil spills on the sea, edge detection is an important technology in image processing. There are many algorithms of edge detection developed for image processing. These edge detection algorithms always have their own advantages and disadvantages in the image processing. Based on the primary requirements of edge detection of the oil spills" image on the sea, computation time and detection accuracy, we developed a fusion model. The model employed a BP neural net to fuse the detection results of simple operators. The reason we selected BP neural net as the fusion technology is that the relation between simple operators" result of edge gray level and the image"s true edge gray level is nonlinear, while BP neural net is good at solving the nonlinear identification problem. Therefore in this paper we trained a BP neural net by some oil spill images, then applied the BP fusion model on the edge detection of other oil spill images and obtained a good result. In this paper the detection result of some gradient operators and Laplacian operator are also compared with the result of BP fusion model to analysis the fusion effect. At last the paper pointed out that the fusion model has higher accuracy and higher speed in the processing oil spill image"s edge detection.

Environment and Climate Changes during the Holocene: Inferred from Sedimentary Record/Proxies of a Paleodelta Region, Southwest Coast of India

NASA Astrophysics Data System (ADS)

Allu, N. C.; Prakash, V.; Gautam, P. K.; Bera, S. K.

2014-12-01

This work explains the sedimentation history and environment and climate changes during the Holocene along the southwest coast of India. The area is characterized by various landforms such as lagoons, barrier islands, beach ridges, paleostrandlines, alluvial plains, marshy lands and flood plains. Paleodelta, located at the mouth of the modern Periyar River is an important geomorphic marker. A borehole of 40 m depth was drilled in the paleodelta and sediment samples were recovered at different depth intervals. Paleoclimate and paleo-environment were inferred based on geochronology, textural and geotechnical parameters, clay minerals, and pollen analysis results. The bottom of the borehole represents an age of ~ 12 ka BP. Sediments exhibit coarsening texture upwards of the borehole, with fine mud and peat intercalations at the bottom. Six litho facies - muddy sand, sand, sandy mud, silty sand, sandy silt, and mud - were recorded. Geotechnical properties comprising moisture content, organic carbon, plasticity index record high values, whereas low bulk density associated with a low critical shear stress, are recorded. An increase in illite and to a lesser degree smectite with concomitant decrease in kaolinite is observed. Sediment texture represents a major change of depositional environment from marine to fluvial sedimentary facies during the major sea level fall i.e., after 7 ka B.P. The present sea level attained during 4-5 ka B.P; major rise of sea level has taken place from 7-11 ka BP and regression during 7 - 5 ka B.P. These transgression and regression phases introduced the changes in the environment of deposition. The monsoon was dynamic and more intense after the major fall of sea level causing the fluctuations in the fluvial facies. Upward coarsening of grain size in the borehole indicates change in sediment deposition due to increased hydrodynamic conditions and strong fluvial action, which can be linked to marine regression. Geotechnical properties suggest

Post-glacial flooding of the Bering Land Bridge dated to 11 cal ka BP based on new geophysical and sediment records

USGS Publications Warehouse

Jakobsson, Martin; Pearce, Christof; Cronin, Thomas M.; Backman, Jan; Anderson, Leif G.; Barrientos, Natalia; Bjork, Goran; Coxhall, Helen; de Boer, Agatha; Mayer, Larry; Morth, Carl-Magnus; Nilsson, Johan; Rattray, Jayne; Sranne, Christian; Semiletov, Igor; O'Regan, Matt

2017-01-01

The Bering Strait connects the Arctic and Pacific oceans and separates the North American and Asian landmasses. The presently shallow ( ∼  53 m) strait was exposed during the sea level lowstand of the last glacial period, which permitted human migration across a land bridge today referred to as the Bering Land Bridge. Proxy studies (stable isotope composition of foraminifera, whale migration into the Arctic Ocean, mollusc and insect fossils and paleobotanical data) have suggested a range of ages for the Bering Strait reopening, mainly falling within the Younger Dryas stadial (12.9–11.7 cal ka BP). Here we provide new information on the deglacial and post-glacial evolution of the Arctic–Pacific connection through the Bering Strait based on analyses of geological and geophysical data from Herald Canyon, located north of the Bering Strait on the Chukchi Sea shelf region in the western Arctic Ocean. Our results suggest an initial opening at about 11 cal ka BP in the earliest Holocene, which is later than in several previous studies. Our key evidence is based on a well-dated core from Herald Canyon, in which a shift from a near-shore environment to a Pacific-influenced open marine setting at around 11 cal ka BP is observed. The shift corresponds to meltwater pulse 1b (MWP1b) and is interpreted to signify relatively rapid breaching of the Bering Strait and the submergence of the large Bering Land Bridge. Although the precise rates of sea level rise cannot be quantified, our new results suggest that the late deglacial sea level rise was rapid and occurred after the end of the Younger Dryas stadial.

Preliminary Geological Findings on the BP-1 Simulant

NASA Technical Reports Server (NTRS)

Rickman, D. L.

2010-01-01

The following is a summation of information and discussion between Doug Stoeser of the USGS and Doug Rickman of NASA in February and March, 2010 pertaining to the BP-1 simulant. The analytical results and the bulk of the text are from communications from Dr. Stoeser. The BP-1 simulant is made from Black Point Basalt Flow, San Francisco Volcanic Field, northern Arizona. There is an aggregate (road metal) quarry on the northern margin of the flow towards the west end that was used as a Desert Research and Technology Studies (Desert RATS) analog test site. Silty material from this site was also used in laboratory tests and found to have geotechnical properties similar to the LHT-2M and Chenobi regolith simulants and is being proposed as a possible simulant for geotechnical use. It currently has the designation of BP-1 (Black Point 1). Figure

IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC

PubMed Central

Ennajdaoui, Hanane; Howard, Jonathan M.; Sterne-Weiler, Timothy; Jahanbani, Fereshteh; Coyne, Doyle J.; Uren, Philip J.; Dargyte, Marija; Katzman, Sol; Draper, Jolene M.; Wallace, Andrew; Cazarez, Oscar; Burns, Suzanne C.; Qiao, Mei; Hinck, Lindsay; Smith, Andrew D.; Toloue, Masoud M.; Blencowe, Benjamin J.; Penalva, Luiz O.F.; Sanford, Jeremy R.

2016-01-01

Summary Insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3) expression correlates with malignancy. But its role(s) in pathogenesis remain enigmatic. Here, we interrogated the IGF2BP3-RNA interaction network in pancreatic ductal adenocarcinoma (PDAC) cells. Using a combination of genome-wide approaches we identify 164 direct mRNA targets of IGF2BP3. These transcripts encode proteins enriched for functions such as cell migration, proliferation and adhesion. Loss of IGF2BP3 reduced PDAC cell invasiveness and remodeled focal adhesion junctions. Individual-nucleotide resolution crosslinking immunoprecipitation (iCLIP) revealed significant overlap of IGF2BP3 and miRNA binding sites. IGF2BP3 promotes association of the RNA induced silencing complex (RISC) with specific transcripts. Our results show that IGF2BP3 influences a malignancy-associated RNA regulon by modulating miRNA-mRNA interactions. PMID:27210763

Best of both worlds: combining pharma data and state of the art modeling technology to improve in Silico pKa prediction.

PubMed

Fraczkiewicz, Robert; Lobell, Mario; Göller, Andreas H; Krenz, Ursula; Schoenneis, Rolf; Clark, Robert D; Hillisch, Alexander

2015-02-23

In a unique collaboration between a software company and a pharmaceutical company, we were able to develop a new in silico pKa prediction tool with outstanding prediction quality. An existing pKa prediction method from Simulations Plus based on artificial neural network ensembles (ANNE), microstates analysis, and literature data was retrained with a large homogeneous data set of drug-like molecules from Bayer. The new model was thus built with curated sets of ∼14,000 literature pKa values (∼11,000 compounds, representing literature chemical space) and ∼19,500 pKa values experimentally determined at Bayer Pharma (∼16,000 compounds, representing industry chemical space). Model validation was performed with several test sets consisting of a total of ∼31,000 new pKa values measured at Bayer. For the largest and most difficult test set with >16,000 pKa values that were not used for training, the original model achieved a mean absolute error (MAE) of 0.72, root-mean-square error (RMSE) of 0.94, and squared correlation coefficient (R(2)) of 0.87. The new model achieves significantly improved prediction statistics, with MAE = 0.50, RMSE = 0.67, and R(2) = 0.93. It is commercially available as part of the Simulations Plus ADMET Predictor release 7.0. Good predictions are only of value when delivered effectively to those who can use them. The new pKa prediction model has been integrated into Pipeline Pilot and the PharmacophorInformatics (PIx) platform used by scientists at Bayer Pharma. Different output formats allow customized application by medicinal chemists, physical chemists, and computational chemists.

Constitutive expression of transgenes encoding derivatives of the synthetic antimicrobial peptide BP100: impact on rice host plant fitness

PubMed Central

2012-01-01

example, BP100 based on inverted repeats, have adequate agronomic performance and resistant phenotypes as a result of a complex equilibrium between bp100der toxicity to plant cells, antimicrobial activity and transgene-derived plant stress response. It is likely that these results can be extended to other peptides with similar characteristics. PMID:22947243

Comparative Analysis of Hybrid Models for Prediction of BP Reactivity to Crossed Legs.

PubMed

Kaur, Gurmanik; Arora, Ajat Shatru; Jain, Vijender Kumar

2017-01-01

Crossing the legs at the knees, during BP measurement, is one of the several physiological stimuli that considerably influence the accuracy of BP measurements. Therefore, it is paramount to develop an appropriate prediction model for interpreting influence of crossed legs on BP. This research work described the use of principal component analysis- (PCA-) fused forward stepwise regression (FSWR), artificial neural network (ANN), adaptive neuro fuzzy inference system (ANFIS), and least squares support vector machine (LS-SVM) models for prediction of BP reactivity to crossed legs among the normotensive and hypertensive participants. The evaluation of the performance of the proposed prediction models using appropriate statistical indices showed that the PCA-based LS-SVM (PCA-LS-SVM) model has the highest prediction accuracy with coefficient of determination ( R 2 ) = 93.16%, root mean square error (RMSE) = 0.27, and mean absolute percentage error (MAPE) = 5.71 for SBP prediction in normotensive subjects. Furthermore, R 2  = 96.46%, RMSE = 0.19, and MAPE = 1.76 for SBP prediction and R 2  = 95.44%, RMSE = 0.21, and MAPE = 2.78 for DBP prediction in hypertensive subjects using the PCA-LSSVM model. This assessment presents the importance and advantages posed by hybrid computing models for the prediction of variables in biomedical research studies.

Dynamic Response of Mycobacterium vanbaalenii PYR-1 to BP Deepwater Horizon Crude Oil

PubMed Central

Kim, Seong-Jae; Kweon, Ohgew; Sutherland, John B.; Kim, Hyun-Lee; Jones, Richard C.; Burback, Brian L.; Graves, Steven W.; Psurny, Edward

2015-01-01

We investigated the response of the hydrocarbon-degrading Mycobacterium vanbaalenii PYR-1 to crude oil from the BP Deepwater Horizon (DWH) spill, using substrate depletion, genomic, and proteome analyses. M. vanbaalenii PYR-1 cultures were incubated with BP DWH crude oil, and proteomes and degradation of alkanes and polycyclic aromatic hydrocarbons (PAHs) were analyzed at four time points over 30 days. Gas chromatography-mass spectrometry (GC-MS) analysis showed a chain length-dependent pattern of alkane degradation, with C12 and C13 being degraded at the highest rate, although alkanes up to C28 were degraded. Whereas phenanthrene and pyrene were completely degraded, a significantly smaller amount of fluoranthene was degraded. Proteome analysis identified 3,948 proteins, with 876 and 1,859 proteins up- and downregulated, respectively. We observed dynamic changes in protein expression during BP crude oil incubation, including transcriptional factors and transporters potentially involved in adaptation to crude oil. The proteome also provided a molecular basis for the metabolism of the aliphatic and aromatic hydrocarbon components in the BP DWH crude oil, which included upregulation of AlkB alkane hydroxylase and an expression pattern of PAH-metabolizing enzymes different from those in previous proteome expression studies of strain PYR-1 incubated with pure or mixed PAHs, particularly the ring-hydroxylating oxygenase (RHO) responsible for the initial oxidation of aromatic hydrocarbons. Based on these results, a comprehensive cellular response of M. vanbaalenii PYR-1 to BP crude oil was proposed. This study increases our fundamental understanding of the impact of crude oil on the cellular response of bacteria and provides data needed for development of practical bioremediation applications. PMID:25888169

IGF2BP3 Modulates the Interaction of Invasion-Associated Transcripts with RISC.

PubMed

Ennajdaoui, Hanane; Howard, Jonathan M; Sterne-Weiler, Timothy; Jahanbani, Fereshteh; Coyne, Doyle J; Uren, Philip J; Dargyte, Marija; Katzman, Sol; Draper, Jolene M; Wallace, Andrew; Cazarez, Oscar; Burns, Suzanne C; Qiao, Mei; Hinck, Lindsay; Smith, Andrew D; Toloue, Masoud M; Blencowe, Benjamin J; Penalva, Luiz O F; Sanford, Jeremy R

2016-05-31

Insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3) expression correlates with malignancy, but its role(s) in pathogenesis remains enigmatic. We interrogated the IGF2BP3-RNA interaction network in pancreatic ductal adenocarcinoma (PDAC) cells. Using a combination of genome-wide approaches, we have identified 164 direct mRNA targets of IGF2BP3. These transcripts encode proteins enriched for functions such as cell migration, proliferation, and adhesion. Loss of IGF2BP3 reduced PDAC cell invasiveness and remodeled focal adhesion junctions. Individual nucleotide resolution crosslinking immunoprecipitation (iCLIP) revealed significant overlap of IGF2BP3 and microRNA (miRNA) binding sites. IGF2BP3 promotes association of the RNA-induced silencing complex (RISC) with specific transcripts. Our results show that IGF2BP3 influences a malignancy-associated RNA regulon by modulating miRNA-mRNA interactions. Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Pleistocene glacial evolution of Fuentes Carrionas (Cantabrian Range, NW Spain)

NASA Astrophysics Data System (ADS)

Pellitero, Ramon

2014-05-01

Fuentes Carrionas is a massif situated at the N of Spain, between Castilla y Leon and Cantabria regions. It is the second highest mountain massif of the Cantabrian Range after Picos de Europa, with peaks over 2500 m.a.s.l. and valleys well over 1000 m.a.s.l. Fuentes Carrionas was glaciated during Quaternary, and even during the Holocene and as far as Little Ice Age the presence of glaciers, or at least permafrost is controversial. Results from glacial geomorphology analysis of Fuentes Carrionas Massif are presented. Based on the interpretation of glacial landforms, glacial evolution since the Last Glacial Maximum until Pleistocene deglaciation is described. Four different glacial equilibrium phases are identified, the last one divided into two pulsations. Deglaciation process took place between 36 ka BP and 11 ka BP. Local Last Glacial Maximum is dated back to 36-38 ka. BP, therefore earlier than LGM. Glaciers reached 15 km. long and occupied valleys down to 1250 m.a.s.l. during this phase. By European LGM (20-18 ka.BP) glaciers had substantially retreated to fronts about 1700 m.a.s.l. A final stage with two marked pulsations shows only small glaciers located at cirques above 2000 m.a.s.l. and, finally, only small cirque glaciers at North and Northeast orientation above 2200 m.a.s.l. Both these phases have been correlated to Oldest and Younger Dryas, although no dates have been done yet. A palaeoenvironmental reconstruction is proposed, based on ELA (Equilibrium Line Altitude) rise. ELA has been calculated with the AAR method and 0.67 ratio. This reconstruction shows that temperatures ranged between 9°C and 10°C lower than present ones at the end of Pleistocene, depending on a precipitations variation between 30% higher and 20% lower than current ones. Further research will focus on these retreat phases, especially on Younger Dryas identification and reconstruction for this site and the rest of Cantabrian Range.

Discrimination of liver cancer in cellular level based on backscatter micro-spectrum with PCA algorithm and BP neural network

NASA Astrophysics Data System (ADS)

Yang, Jing; Wang, Cheng; Cai, Gan; Dong, Xiaona

2016-10-01

The incidence and mortality rate of the primary liver cancer are very high and its postoperative metastasis and recurrence have become important factors to the prognosis of patients. Circulating tumor cells (CTC), as a new tumor marker, play important roles in the early diagnosis and individualized treatment. This paper presents an effective method to distinguish liver cancer based on the cellular scattering spectrum, which is a non-fluorescence technique based on the fiber confocal microscopic spectrometer. Combining the principal component analysis (PCA) with back propagation (BP) neural network were utilized to establish an automatic recognition model for backscatter spectrum of the liver cancer cells from blood cell. PCA was applied to reduce the dimension of the scattering spectral data which obtained by the fiber confocal microscopic spectrometer. After dimensionality reduction by PCA, a neural network pattern recognition model with 2 input layer nodes, 11 hidden layer nodes, 3 output nodes was established. We trained the network with 66 samples and also tested it. Results showed that the recognition rate of the three types of cells is more than 90%, the relative standard deviation is only 2.36%. The experimental results showed that the fiber confocal microscopic spectrometer combining with the algorithm of PCA and BP neural network can automatically identify the liver cancer cell from the blood cells. This will provide a better tool for investigating the metastasis of liver cancers in vivo, the biology metabolic characteristics of liver cancers and drug transportation. Additionally, it is obviously referential in practical application.

Cold climate deglaciation prior to termination 2 implied by new evidence for high sea-levels at 132 KA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, R.G.

1992-01-01

Radioisotope dating of corals from reefs and beaches suggests a high sea stand just prior to termination 2. Lack of precision in the ages, stratigraphic uncertainties, and possible diagenetic alterations in the corals have prevented a widespread acceptance of this sea stand. These disadvantages can be avoided by an approach that uses differential uplift measurements to determine the duration of the interval of generally high sea-levels. The last interglacial terrace on Barbados has features indicating two intervals of constant sea-level: an older wave-cut at the inshore edge of the terrace, and a younger cut formed near present eustatic sea-level, belowmore » the crest, and just before the earliest Wisconsin glacial buildup. The differential uplift between these two features, measured at five locations having uplift rates between 0.18 and 0.39m/ka, yields a eustatic sea-level differences of 5.4m and a minimal duration of 12.1 [+-] 0.6ka between the two still stands. The assigned age of the younger wave-cut is 120 [+-] 0.5ka, based on sea-level regression due to ice sheet buildup implied by a Little Ice Age analog and rapidly falling Milankovitch summer insolation. The resulting minimal age of the first high sea-stand is 132.1 [+-] 1.1ka, about 7ka before termination 2. This age implies a major early deglaciation caused by a deficit of moisture transported to the great ice sheets, and occurring under relatively cold climate conditions.« less

Ka-band MMIC arrays for ACTS Aero Terminal Experiment

NASA Technical Reports Server (NTRS)

Raquet, C.; Zakrajsek, R.; Lee, R.; Turtle, J.

1992-01-01

An antenna system consisting of three experimental Ka-band active arrays using GaAs MMIC devices at each radiating element for electronic beam steering and distributed power amplification is presented. The MMIC arrays are to be demonstrated in the ACTS Aeronautical Terminal Experiment, planned for early 1994. The experiment is outlined, with emphasis on a description of the antenna system. Attention is given to the way in which proof-of-concept MMIC arrays featuring three different state-of-the-art approaches to Ka-band MMIC insertion are being incorporated into an experimental aircraft terminal for the demonstration of an aircraft-to-satellite link, providing a basis for follow-on MMIC array development.

Preliminary Geological Findings on the BP-1 Simulant

NASA Technical Reports Server (NTRS)

Stoeser, D. B.; Rickman, D. L.; Wilson, S.

2010-01-01

A waste material from an aggregate producing quarry has been used to make an inexpensive lunar simulant called BP-1. The feedstock is the Black Point lava flow in northern Arizona. Although this is part of the San Francisco volcanic field, which is also the source of the JSC-1 series feedstock, BP-1 and JSC-1 are distinct. Chemically, the Black Point flow is an amygdaloidal nepheline-bearing basalt. The amygdules are filled with secondary minerals containing opaline silica, calcium carbonate, and ferric iron minerals. X-ray diffraction (XRD) detected approximately 3% quartz, which is in line with tests done by the Kennedy Space Center Industrial Hygiene Office. Users of this material should use appropriate protective equipment. XRD also showed the presence of significant halite and some bassanite. Both are interpreted to be evaporative residues due to recycling of wash water at the quarry. The size distribution of BP-1 may be superior to some other simulants for some applications.

Assessment of the Atmospheric Channel for Short (Ka-Band and Optical) Wavelengths

NASA Technical Reports Server (NTRS)

Piazzolla, Sabino

2007-01-01

Atmospheric turbulence under clear sky conditions is an impairment of the atmospheric channel that greatly affects propagation of optical signal in the troposphere. The turbulence manifests itself in a number of forms within the optical domain, from the twinkling of a star in a clear night, to resolution degradation in a large aperture telescope. Therefore, a body of analytical, numerical, and experimental tools has been developed in optics to study, simulate, and control effects of atmospheric turbulence on an optical signal. Incidentally, there has been an increasing demand for high data rate returns from NASA missions which has led to envision utilizing a carrier signal in the Ka-Band range. The impact of atmospheric turbulence effects must be evaluated and considered for this frequency domain. The purpose of this work is to show that when the turbulence strength from the optical case to the KaBand ease is properly scaled, one can apply the same mathematical simulation developed for optical to predict turbulence effects within the Ka-Band domain. As a demonstration of this principle, we present how the scintillations of a Ka-Band downlink return of a deep space signal was successfully reproduced through wave-optics simulation.

On-line dynamic monitoring automotive exhausts: using BP-ANN for distinguishing multi-components

NASA Astrophysics Data System (ADS)

Zhao, Yudi; Wei, Ruyi; Liu, Xuebin

2017-10-01

Remote sensing-Fourier Transform infrared spectroscopy (RS-FTIR) is one of the most important technologies in atmospheric pollutant monitoring. It is very appropriate for on-line dynamic remote sensing monitoring of air pollutants, especially for the automotive exhausts. However, their absorption spectra are often seriously overlapped in the atmospheric infrared window bands, i.e. MWIR (3 5μm). Artificial Neural Network (ANN) is an algorithm based on the theory of the biological neural network, which simplifies the partial differential equation with complex construction. For its preferable performance in nonlinear mapping and fitting, in this paper we utilize Back Propagation-Artificial Neural Network (BP-ANN) to quantitatively analyze the concentrations of four typical industrial automotive exhausts, including CO, NO, NO2 and SO2. We extracted the original data of these automotive exhausts from the HITRAN database, most of which virtually overlapped, and established a mixed multi-component simulation environment. Based on Beer-Lambert Law, concentrations can be retrieved from the absorbance of spectra. Parameters including learning rate, momentum factor, the number of hidden nodes and iterations were obtained when the BP network was trained with 80 groups of input data. By improving these parameters, the network can be optimized to produce necessarily higher precision for the retrieved concentrations. This BP-ANN method proves to be an effective and promising algorithm on dealing with multi-components analysis of automotive exhausts.

Computational chemical analysis of unconjugated bilirubin anions and insights into pKa values clarification

NASA Astrophysics Data System (ADS)

Vega-Hissi, Esteban G.; Estrada, Mario R.; Lavecchia, Martín J.; Pis Diez, Reinaldo

2013-01-01

The pKa, the negative logarithm of the acid dissociation equilibrium constant, of the carboxylic acid groups of unconjugated bilirubin in water is a discussed issue because there are quite different experimental values reported. Using quantum mechanical calculations we have studied the conformational behavior of unconjugated bilirubin species (in gas phase and in solution modeled implicitly and explicitly) to provide evidence that may clarify pKa values because of its pathophysiological relevance. Our results show that rotation of carboxylate group, which is not restricted, settles it in a suitable place to establish stronger interactions that stabilizes the monoanion and the dianion to be properly solvated, demonstrating that the rationalization used to justify the high pKa values of unconjugated bilirubin is inappropriate. Furthermore, low unconjugated bilirubin (UCB) pKa values were estimated from a linear regression analysis.

Ka-band Technologies for Small Spacecraft Communications via Relays and Direct Data Downlink

NASA Technical Reports Server (NTRS)

Budinger, James M.; Niederhaus, Charles; Reinhart, Richard; Downey, Joe; Roberts, Anthony

2016-01-01

As the scientific capabilities and number of small spacecraft missions in the near Earth region increase, standard yet configurable user spacecraft terminals operating in Ka-band are needed to lower mission cost and risk and enable significantly higher data return than current UHF or S-band terminals. These compact Ka-band terminals are intended to operate with both the current and next generation of Ka-band relay satellites and via direct data communications with near Earth tracking terminals. This presentation provides an overview of emerging NASA-sponsored and commercially provided technologies in software defined radios (SDRs), transceivers, and electronically steered antennas that will enable data rates from hundreds of kbps to over 1 Gbps and operate in multiple frequency bands (such as S- and X-bands) and expand the use of NASA's common Ka-bands frequencies: 22.55-23.15 GHz for forward data or uplink; and 25.5-27.0 GHz for return data or downlink. Reductions in mass, power and volume come from integration of multiple radio functions, operations in Ka-band, high efficiency amplifiers and receivers, and compact, flat and vibration free electronically steered narrow beam antennas for up to + 60 degrees field of regard. The software defined near Earth space transceiver (SD-NEST) described in the presentation is intended to be compliant with NASA's space telecommunications radio system (STRS) standard for communications waveforms and hardware interoperability.

Microvibrations in a 20 M Long Ka-Band SAR Interferometer

NASA Astrophysics Data System (ADS)

Rodriques, G.; Ludwig, M.; Santiago-Prowald, J.

2014-06-01

Interferometric SAR operating at Ka-band has the potential for offering high-resolution 3D images of the surface of the Earth taken from a single-platform.The stability of the mechanical baseline of such an instrument has been considered as a key critical area for the feasibility of the concept.This paper is devoted to the analysis of the micro- vibrations in a 20-m long Ka-band SAR interferometer arising during typical attitude changing manoeuvers and the mechanical noise transmitted from reaction wheels. It is preliminarily concluded that the expected microvibration levels are within the requirements of the instrument.

Assessing Specific Oligonucleotides and Small Molecule Antibiotics for the Ability to Inhibit the CRD-BP-CD44 RNA Interaction

PubMed Central

Thomsen, Dana; Lee, Chow H.

2014-01-01

Studies on Coding Region Determinant-Binding Protein (CRD-BP) and its orthologs have confirmed their functional role in mRNA stability and localization. CRD-BP is present in extremely low levels in normal adult tissues, but it is over-expressed in many types of aggressive human cancers and in neonatal tissues. Although the exact role of CRD-BP in tumour progression is unclear, cumulative evidence suggests that its ability to physically associate with target mRNAs is an important criterion for its oncogenic role. CRD-BP has high affinity for the 3′UTR of the oncogenic CD44 mRNA and depletion of CRD-BP in cells led to destabilization of CD44 mRNA, decreased CD44 expression, reduced adhesion and disruption of invadopodia formation. Here, we further characterize the CRD-BP-CD44 RNA interaction and assess specific antisense oligonucleotides and small molecule antibiotics for their ability to inhibit the CRD-BP-CD44 RNA interaction. CRD-BP has a high affinity for binding to CD44 RNA nts 2862–3055 with a Kd of 645 nM. Out of ten antisense oligonucleotides spanning nts 2862–3055, only three antisense oligonucleotides (DD4, DD7 and DD10) were effective in competing with CRD-BP for binding to 32P-labeled CD44 RNA. The potency of DD4, DD7 and DD10 in inhibiting the CRD-BP-CD44 RNA interaction in vitro correlated with their ability to specifically reduce the steady-state level of CD44 mRNA in cells. The aminoglycoside antibiotics neomycin, paramomycin, kanamycin and streptomycin effectively inhibited the CRD-BP-CD44 RNA interaction in vitro. Assessing the potential inhibitory effect of aminoglycoside antibiotics including neomycin on the CRD-BP-CD44 mRNA interaction in cells proved difficult, likely due to their propensity to non-specifically bind nucleic acids. Our results have important implications for future studies in finding small molecules and nucleic acid-based inhibitors that interfere with protein-RNA interactions. PMID:24622399

Assessing specific oligonucleotides and small molecule antibiotics for the ability to inhibit the CRD-BP-CD44 RNA interaction.

PubMed

King, Dustin T; Barnes, Mark; Thomsen, Dana; Lee, Chow H

2014-01-01

Studies on Coding Region Determinant-Binding Protein (CRD-BP) and its orthologs have confirmed their functional role in mRNA stability and localization. CRD-BP is present in extremely low levels in normal adult tissues, but it is over-expressed in many types of aggressive human cancers and in neonatal tissues. Although the exact role of CRD-BP in tumour progression is unclear, cumulative evidence suggests that its ability to physically associate with target mRNAs is an important criterion for its oncogenic role. CRD-BP has high affinity for the 3'UTR of the oncogenic CD44 mRNA and depletion of CRD-BP in cells led to destabilization of CD44 mRNA, decreased CD44 expression, reduced adhesion and disruption of invadopodia formation. Here, we further characterize the CRD-BP-CD44 RNA interaction and assess specific antisense oligonucleotides and small molecule antibiotics for their ability to inhibit the CRD-BP-CD44 RNA interaction. CRD-BP has a high affinity for binding to CD44 RNA nts 2862-3055 with a Kd of 645 nM. Out of ten antisense oligonucleotides spanning nts 2862-3055, only three antisense oligonucleotides (DD4, DD7 and DD10) were effective in competing with CRD-BP for binding to 32P-labeled CD44 RNA. The potency of DD4, DD7 and DD10 in inhibiting the CRD-BP-CD44 RNA interaction in vitro correlated with their ability to specifically reduce the steady-state level of CD44 mRNA in cells. The aminoglycoside antibiotics neomycin, paramomycin, kanamycin and streptomycin effectively inhibited the CRD-BP-CD44 RNA interaction in vitro. Assessing the potential inhibitory effect of aminoglycoside antibiotics including neomycin on the CRD-BP-CD44 mRNA interaction in cells proved difficult, likely due to their propensity to non-specifically bind nucleic acids. Our results have important implications for future studies in finding small molecules and nucleic acid-based inhibitors that interfere with protein-RNA interactions.

Weathered Oil and Tar Sampling Data for BP Spill/Deepwater Horizon

EPA Pesticide Factsheets

The Deepwater Horizon oil spill (also referred to as the BP oil spill) began on 20 April 2010 in the Gulf of Mexico on the BP-operated Macondo Prospect. Following the explosion and sinking of the Deepwater Horizon oil rig, a sea-floor oil gusher flowed for 87 days, until it was capped on 15 July 2010.In response to the BP oil spill, EPA sampled air, water, sediment, and waste generated by the cleanup operations.

X/X/Ka-band prime focus feed antenna for the Mars Observer beacon spacecraft

NASA Technical Reports Server (NTRS)

Stanton, P.; Reilly, H.; Esquivel, M.

1988-01-01

The results of an X/X/Ka-band feed design concept demonstration are presented. The purpose is to show the feasibility of adding a Ka-band beacon to the Mars Observer spacecraft. Scale model radiation patterns were made and analyzed.

Fluvial landscapes evolution in the Gangkou River basin of southern Taiwan: Evidence from the sediment cores

NASA Astrophysics Data System (ADS)

Chen, Jia-Hong; Chyi, Shyh-Jeng; Yen, Jiun-Yee; Lin, Li-Hung; Yen, I.-Chin; Yu, Neng-Ti; Ho, Lih-Der; Jen, Chia-Hung

2017-04-01

The Gangkou River basin is the largest basin in the eastern Hengchun Peninsula of Taiwan. Its main river length is 31km and the basin area is 102sq. km. The width of the active channel is relatively narrow, but the valley from the middle to downstream is remarkably wide, indicating a feature of underfit stream. We drilled two sediment cores in the downstream area, including a 30m core (core-A) from a higher terrace, which is 14m above mean sea level, and a 20m core (core-B) from a lower terrace, which is 4m above mean sea level. Most of the sediments in the core-A are mud, which represents the flood plain facies, and 14C dates in the core-A range from 11ka to 7ka BP. Furthermore, the sediment layers reveal signals of marine events at the core depths of 5m to 11m by X-ray fluorescence. In the core-B, there is an erosional surface at the core depth of 5m. The age of the fluvial gravel layer above the erosional surface is about 0.4ka BP, and the mud layer top the surface is about 8.5ka BP. The preliminary results show that (1) as the tectonic uplift rate induced by the marine terraces around the basin is 1.0 to 2.5 mm/yr, and the accumulation rate of the mud layer in the basin is 6.7 to 8.7 mm/yr, the sediments infilling (more than 30-meters-thick) in the downstream area of the basin should be the results of the lower tectonic uplifting and the higher post-glacial sea level rise and; (2) the marine sediment layer with 14C dates of 7.5ka to 8.5ka BP is very likely the remain of the maximum flooding surface (MFS) in the early Holocene. These results indicate that the fluvial landscapes evolution of the basin was controlled by the sea-level; (3) the erosional surface in the core-B indicates the Gangkou River continuously erode the infilling sediments from 7ka to 0.4ka BP. Previous studies show that the sea-level around Taiwan gradually declined from its high stand since 6ka, we proposed that the continuous erosion was probably the results of tectonic uplifting and

TIRR regulates 53BP1 by masking its histone methyl-lysine binding function.

PubMed

Drané, Pascal; Brault, Marie-Eve; Cui, Gaofeng; Meghani, Khyati; Chaubey, Shweta; Detappe, Alexandre; Parnandi, Nishita; He, Yizhou; Zheng, Xiao-Feng; Botuyan, Maria Victoria; Kalousi, Alkmini; Yewdell, William T; Münch, Christian; Harper, J Wade; Chaudhuri, Jayanta; Soutoglou, Evi; Mer, Georges; Chowdhury, Dipanjan

2017-03-09

P53-binding protein 1 (53BP1) is a multi-functional double-strand break repair protein that is essential for class switch recombination in B lymphocytes and for sensitizing BRCA1-deficient tumours to poly-ADP-ribose polymerase-1 (PARP) inhibitors. Central to all 53BP1 activities is its recruitment to double-strand breaks via the interaction of the tandem Tudor domain with dimethylated lysine 20 of histone H4 (H4K20me2). Here we identify an uncharacterized protein, Tudor interacting repair regulator (TIRR), that directly binds the tandem Tudor domain and masks its H4K20me2 binding motif. Upon DNA damage, the protein kinase ataxia-telangiectasia mutated (ATM) phosphorylates 53BP1 and recruits RAP1-interacting factor 1 (RIF1) to dissociate the 53BP1-TIRR complex. However, overexpression of TIRR impedes 53BP1 function by blocking its localization to double-strand breaks. Depletion of TIRR destabilizes 53BP1 in the nuclear-soluble fraction and alters the double-strand break-induced protein complex centring 53BP1. These findings identify TIRR as a new factor that influences double-strand break repair using a unique mechanism of masking the histone methyl-lysine binding function of 53BP1.

Effect of CPAP Withdrawal on BP in OSA: Data from Three Randomized Controlled Trials.

PubMed

Schwarz, Esther I; Schlatzer, Christian; Rossi, Valentina A; Stradling, John R; Kohler, Malcolm

2016-12-01

Based on meta-analyses, the BP-lowering effect of CPAP therapy in patients with OSA is reported to be approximately 2 to 3 mm Hg. This figure is derived from heterogeneous trials, which are often limited by poor CPAP adherence, and thus the treatment effect may possibly be underestimated. We analyzed morning BP data from three randomized controlled CPAP withdrawal trials, which included only patients with optimal CPAP compliance. Within the three trials, 149 patients with OSA who were receiving CPAP were randomized to continue therapeutic CPAP (n = 65) or to withdraw CPAP (n = 84) for 2 weeks. Morning BP was measured at home before and after sleep studies in the hospital. CPAP withdrawal was associated with a return of OSA (apnea-hypopnea index [AHI] at a baseline of 2.8/h and at follow-up of 33.2/h). Office systolic BP (SBP) increased in the CPAP withdrawal group compared with the CPAP continuation group by +5.4 mm Hg (95% CI, 1.8-8.9 mm Hg; P = .003) and in the home SBP group by +9.0 mm Hg (95% CI, 5.7-12.3 mm Hg; P < .001). Office diastolic BP (DBP) increased by +5.0 mm Hg (95% CI, 2.7-7.3 mm Hg; P < .001), and home DBP increased by +7.8 mm Hg (95% CI, 5.6-10.4 mm Hg; P < .001). AHI, baseline home SBP, use of statin drugs, sex, and the number of antihypertensive drugs prescribed were all independently associated with SBP change in multivariate analysis, controlling for age, BMI, smoking status, diabetes, and sleepiness. CPAP withdrawal results in a clinically relevant increase in BP, which is considerably higher than in conventional CPAP trials; it is also underestimated when office BP is used. Greater OSA severity is associated with a higher BP rise in response to CPAP withdrawal. ClinicalTrials.gov; No.: NCT01332175 and NCT01797653) URL: www.clinicaltrials.gov and ISRCTN registry (ISRCTN 93153804) URL: http://www.isrctn.com/. Copyright © 2016 American College of Chest Physicians. Published by Elsevier Inc. All rights

Neurotoxicity fingerprinting of venoms using on-line microfluidic AChBP profiling.

PubMed

Slagboom, Julien; Otvos, Reka A; Cardoso, Fernanda C; Iyer, Janaki; Visser, Jeroen C; van Doodewaerd, Bjorn R; McCleary, Ryan J R; Niessen, Wilfried M A; Somsen, Govert W; Lewis, Richard J; Kini, R Manjunatha; Smit, August B; Casewell, Nicholas R; Kool, Jeroen

2018-06-15

Venoms from snakes are rich sources of highly active proteins with potent affinity towards a variety of enzymes and receptors. Of the many distinct toxicities caused by envenomation, neurotoxicity plays an important role in the paralysis of prey by snakes as well as by venomous sea snails and insects. In order to improve the analytical discovery component of venom toxicity profiling, this paper describes the implementation of microfluidic high-resolution screening (HRS) to obtain neurotoxicity fingerprints from venoms that facilitates identification of the neurotoxic components of envenomation. To demonstrate this workflow, 47 snake venoms were profiled using the acetylcholine binding protein (AChBP) to mimic the target of neurotoxic proteins, in particular nicotinic acetylcholine receptors (nAChRs). In the microfluidic HRS system, nanoliquid chromatographic (nanoLC) separations were on-line connected to both AChBP profiling and parallel mass spectrometry (MS). For virtually all neurotoxic elapid snake venoms tested, we obtained bioactivity fingerprints showing major and minor bioactive zones containing masses consistent with three-finger toxins (3FTxs), whereas, viperid and colubrid venoms showed little or no detectable bioactivity. Our findings demonstrate that venom interactions with AChBP correlate with the severity of neurotoxicity observed following human envenoming by different snake species. We further, as proof of principle, characterized bioactive venom peptides from a viperid (Daboia russelli) and an elapid (Aspidelaps scutatus scutatus) snake by nanoLC-MS/MS, revealing that different toxin classes interact with the AChBP, and that this binding correlates with the inhibition of α7-nAChR in calcium-flux cell-based assays. The on-line post-column binding assay and subsequent toxin characterization methodologies described here provide a new in vitro analytic platform for rapidly investigating neurotoxic snake venom proteins. Copyright © 2018 The Author

TopBP1-mediated DNA processing during mitosis.