The geomorphological evidences of subsidence in the Nile Delta: Analysis of high resolution topographic DEM and multi-temporal satellite images

NASA Astrophysics Data System (ADS)

El Bastawesy, M.; Cherif, O. H.; Sultan, M.

2017-12-01

This paper investigates the relevance of landforms to the subsidence of the Nile Delta using a high resolution topographic digital elevation model (DEM) and sets of multi-temporal Landsat satellite images. 195 topographic map sheets produced in 1946 at 1:25,000 scale were digitized, and the DEM was interpolated. The undertaken processing techniques have distinguished all the natural low-lying closed depressions from the artificial errors induced by the interpolation of the DEM. The local subsidence of these depressions from their surroundings reaches a maximum depth of 2.5 m. The regional subsidence of the Nile Delta has developed inverted topography, where the tracts occupied by the contemporary distributary channels are standing at higher elevations than the areas in between. This inversion could be related to the differences in the hydrological and sedimentological properties of underlying sediments, as the channels are underlain by water-saturated sands while the successions of clay and silt on flood plains are prone to compaction. Furthermore, the analysis of remote sensing and topographic data clearly show significant changes in the land cover and land use, particularly in the northern lagoons and adjacent sabkhas, which are dominated by numerous low subsiding depressions. The areas covered by water logging and ponds are increasing on the expense of agricultural areas, and aquaculture have been practiced instead. The precise estimation of subsidence rates and distribution should be worked out to evaluate probable changes in land cover and land use.

Satellite mapping of Nile Delta coastal changes

NASA Technical Reports Server (NTRS)

Blodget, H. W.; Taylor, P. T.; Roark, J. H.

1989-01-01

Multitemporal, multispectral scanner (MSS) landsat data have been used to monitor erosion and sedimentation along the Rosetta Promontory of the Nile Delta. These processes have accelerated significantly since the completion of the Aswan High Dam in 1964. Digital differencing of four MSS data sets, using standard algorithms, show that changes observed over a single year period generally occur as strings of single mixed pixels along the coast. Therefore, these can only be used qualitatively to indicate areas where changes occur. Areas of change recorded over a multi-year period are generally larger and thus identified by clusters of pixels; this reduces errors introduced by mixed pixels. Satellites provide a synoptic perspective utilizing data acquired at frequent time intervals. This permits multiple year monitoring of delta evolution on a regional scale.

Modeling the Impact of controlled flow and sediment releases for the restoration of the Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Al-Zaidi, B. M.; Moussa, A.; Viparelli, E.

2017-12-01

The construction of the High and Old Aswan Dams and of barrages significantly altered the flow and the sediment transport regimes in the Egyptian reach of the Nile River. The field data collected by the Nile Research Institute show that the post-High Aswan Dam Nile River hydrology is characterized by reductions of more than 70% in flow discharge and 98% in sediment load compared to pre-High Aswan Dam conditions. A significant portion of discharge released from the dams is diverted at the barrages for agricultural ( 80%) and municipal ( 15%) uses. Thus, virtually no water is reaching the Nile Delta and the Mediterranean Sea. Consequently, the sediment load delivered to the Mediterranean Sea is negligible compared to pre-dam conditions. Consequences of the flow regulation are delta wide wetland loss and shoreline retreat, widespread delta pollution, reduction soil quality, salination of cultivated land, wetland losses, and saltwater intrusion in the groundwater. Here we present the second part of a feasibility study for the restoration of the Nile River-Delta system characterized by controlled flow releases and sediment augmentations downstream of the High Aswan Dam. The controlled flow releases are obtained by regulating the current releases from the High Aswan Dam at the Old Aswan Dam, which is located 6.5 km downstream of the High Aswan Dam. Previous studies showed that 10 billion m3 of water can be saved annually by improving the Egyptian irrigation system. Here we propose to use the saved water to increase the water discharge to the Nile Delta, i.e., the total volume of water released from the dams does not change, what changes is the water used and the imposed hydrograph. We modulate the river flow by storing the saved water during the agriculture season upstream of the Old Aswan Dam and releasing it in the months coinciding with the natural river flood season. It is important to note that here we are considering the simplest possible scenario for water storage

Late Holocene sedimentation in a high Arctic coastal setting: Simpson Lagoon and Colville Delta, Alaska

NASA Astrophysics Data System (ADS)

Hanna, Andrea J. M.; Allison, Mead A.; Bianchi, Thomas S.; Marcantonio, Franco; Goff, John A.

2014-02-01

Arctic coastal environments near major river outfalls, like Simpson Lagoon, Alaska and the adjacent Colville River Delta, potentially contain high-resolution sediment records useful in elucidating late Holocene Arctic sediment transport pathways and coupled terrestrial-ocean evidence of paleoclimate variability. This study utilizes a multi-tracer geochronology approach (137Cs, 239,240Pu, and 14C) tailored for high-latitude environments to determine the age models for cores collected from Simpson Lagoon, and to date seismic boundaries in shallow acoustic reflection data (CHIRP) to examine late Holocene infill patterns. Modern (~100 y) sediment accumulation rates range from <0.02 to 0.46±0.04 cm y-1, with a primary depocenter in western Simpson Lagoon adjacent to the Colville Delta and a secondary depocenter in eastern Simpson Lagoon. CHIRP reflectors, age-constrained by 14C analysis, reveal rapid late Holocene (0-3500 y BP) transgression consistent with high modern shoreline retreat rates. The western depocenter contains >5 m of late Holocene interbedded sediments, likely derived primarily from the Colville River, with onset of accumulation occurring prior to ~3500 y BP. A paleo-high in central Simpson Lagoon, separating the two depocenters, was subaerially exposed prior to ~600 y BP. The millimeters-per-year sedimentation rates across the lagoon, coupled with the undisturbed, interbedded sediment record, indicate that these settings hold great potential to develop new Arctic paleoenvironmental records.

Determining the palaeodrainage of the Nile river from a provenance study of the Nile delta cone sediments: an on-going geochemical study

NASA Astrophysics Data System (ADS)

Fielding, Laura; Najman, Yani; Millar, Ian; Butterworth, Peter; Kneller, Ben; Garzanti, Eduardo

2013-04-01

This study documents the palaeodrainage history of the Nile River, in particular the time of transition from a small locally sourced drainage network to the initiation of an extensive Nile catchment, by conducting a provenance study of the well-dated Nile cone sediments. The identification of specific source inputs into the Nile cone has important implications for the prediction of reservoir quality and connectivity in hydrocarbon reservoirs. Presently, the Nile river drains as far south as south of Lake Victoria, with the White Nile draining largely Cratonic basement rocks of Archean to Proterozoic ages and the Blue Nile draining Cenozoic continental flood basalts and Neoproterozoic basement in Ethiopia. However, the timing of catchment expansion to its current extent is highly debated. There are a number of proposed palaeodrainage reconstructions, two of which are: A) The Blue Nile did not connect with the main (lower) Nile until the Late Messinian, and the White Nile did not connect with the lower Nile until at 0.5 Ma (e.g. Issawi and McCauley, 1992). In this model, the pre-Messinian Nile cone sediments are derived exclusively from the northern part of the present drainage basin, from the Red Sea Hills. B) The Blue Nile and Atbara Rivers have been connected to the main (lower) Nile since the Oligocene, simultaneous with large scale regional uplift and volcanism in the Ethiopian Highlands; with the river following a similar course to present day (Burke and Wells 1989). The palaeo-Nile cone sediments have the capacity to provide a unique archive of the river's highly debated palaeodrainage history. Our first objective was to characterise petrographically, geochemically and isotopically each possible source area (Ethiopian Flood Basalts, African Craton and Red Sea Hills) using a multidisciplinary approach in order to identify the presence (if any) of sediment from these sources in the delta core samples. Heavy mineral, petrographic, U-Pb zircon and rutile analyses

Spatial variability in fish species assemblage and community structure in four subtropical lagoons of the Okavango Delta, Botswana

NASA Astrophysics Data System (ADS)

Mosepele, K.; Mosepele, B.; Bokhutlo, T.; Amutenya, K.

The species assemblage and community structure of four lagoons was assessed through time series data collected between 2001 and 2005 in the Okavango Delta. The main aim of this study was to evaluate the importance of lagoons as fish habitats in the Delta. Therefore, this study assessed the importance of these habitats through determining fish species diversity, composition, relative abundance, and community structure between the lagoons. Forty six species belonging to 11 families and five orders were collected over the study period. Main results showed that Cichlidae was the most important family and had the highest species richness in the lagoons. Significant differences ( p < 0.05) were observed in species richness, faunal composition, and diversity among some of the lagoons. Moreover, there were also variations in species composition, and also significant differences in mean length and weight of some selected fish species in the four lagoons. This study showed that lagoons are important repositories of food fish to local communities. Moreover, a management of the fish stocks based on restricting fishing in some lagoons as protected areas is not feasible because of these significant differences in species assemblages between lagoons. Furthermore, lagoons are subject to multiple where most of the lodges are constructed, which makes subsequently makes them vulnerable to pollution. Therefore, the integrity of lagoon habitats needs to be maintained so that their ecosystem functioning (i.e. fish repositories) is maintained.

Use of Persistent Scatterer Interferometry to Assess Land Deformation in the Nile Delta and its Controlling Factors

NASA Astrophysics Data System (ADS)

Gebremichael, E.; Sultan, M.; Becker, R.; Emil, M.; Ahmed, M.; Chouinard, K.

2015-12-01

We applied Persistent scatterer interferometry (PSInSAR) to assess land deformation (subsidence and uplift) across the entire Nile delta and its surroundings and to identify possible causes of the observed deformation. For the purpose of the present study, 100 Envisat Advanced Synthetic Aperture Radar (ASAR; level 0) scenes that were acquired along four tracks and covering a time span of seven years (2004 to 2010) were used. The scenes extend from the Mediterranean coast in the north to Cairo city in the south. These scenes were focused using Repeat Orbit Interferometry PACkage (ROI_PAC) software and the subsequent PSI processing was done using the Stanford Method for Persistent Scatterers (StaMPS) method. A low coherence threshold (0.2) was used to decrease the impact of vegetation-related poor coherence and decorrelation of the scenes over the investigated time span. Subsidence was observed over: (1) the Demietta Nile River branch (3 to 14 mm/yr) where it intersects the Mediterranean coastline, (2) thick (~ 40 m) Holocene sediments in lake Manzala (up to 9 mm/yr), (3) reclaimed desert areas (west of Nile Delta; up to 12 mm/yr) of high groundwater extraction, (4) along parts of a previously proposed flexure line (up to 10 mm/yr), and (5) along the eastern sections of the Mediterranean coastline (up to 15.7 mm/yr). The city of Alexandria (underlain by carbonate platform) and the terminus of the Rosetta branch of the Nile River seem to experience almost no ground movement (mean subsidence of 0.28 mm/yr and 0.74 mm/yr respectively) while the cities of Ras Elbar and Port Said (underlain by thick Holocene sediment) exhibit the highest subsidence values (up to 14 mm/yr and 8.5 mm/yr respectively). The city of Cairo has also experienced subsidence in limited areas of up to 7.8 mm/yr. High spatial correlation was also observed between the subsiding areas and the Abu Madi incised valley; the largest gas field in the Nile Delta. Most of the area undergoing subsidence in the

Nile Delta

Atmospheric Science Data Center

2013-04-15

... west are the Great Pyramids of Giza. North of here the Nile branches into two distributaries, the Rosetta to the west and the Damietta to ... NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Science Mission Directorate, Washington, D.C. The Terra spacecraft is managed ...

Spring and Summer Proliferation of Floating Macroalgae in a Mediterranean Coastal Lagoon (Tancada Lagoon, Ebro Delta, NE Spain)

NASA Astrophysics Data System (ADS)

Menéndez, M.; Comín, F. A.

2000-08-01

During the last 10 years, a drastic change in the structure of the community of primary producers has been observed in Tancada Lagoon (Ebro Delta, NE Spain). This consisted of a decrease in the abundance of submerged rooted macrophyte cover and a spring and summer increase in floating macroalgae. Two spatial patterns have been observed. In the west part of the lagoon, Chaetomorpha linum Kützing, dominated during winter and decreased progressively in spring when Cladophora sp. reached its maximum development. In the east part of the lagoon, higher macroalgal diversity was observed, together with lower cover in winter and early spring. Cladophora sp., Gracilaria verrucosa Papenfuss and Chondria tenuissima Agardh, increased cover and biomass in summer. Maximum photosynthetic production was observed in spring for G. verrucosa (10·9 mg O 2 g -1 DW h -1) and C. tenuissima (19·0 mg O 2 g -1 DW h -1) in contrast with Cladophora sp. (15·9 mg O 2 g -1 DW h -1) and Chaetomorpha linum (7·2 mg O 2 g -1 DW h -1) which reached maximum production in summer. Increased conductivity from reduced freshwater inflow, and higher water temperatures during periods of lagoon isolation, mainly in summer, were the main physical factors associated with an increase in floating macroalgal biomass across the lagoon. Reduced nitrogen availability and temperature-related changes in carbon availability during summer were related to a decrease in abundance of C. linum and increases in G. verrucosa and Cladophora sp.

Normal haematology and blood biochemistry of wild Nile crocodiles (Crocodylus niloticus) in the Okavango Delta, Botswana.

PubMed

Lovely, C J; Pittman, J M; Leslie, A J

2007-09-01

Wild Nile crocodiles (Crocodylus niloticus) of various size classes were captured in the Okavango Delta, Botswana. Blood was collected from the post occipital sinus and used for the determination of a wide range of haematological and biochemical parameters. These values were compared between the sexes and between 3 size classes. The values were also compared with the limited data available from farmed Nile crocodiles, as well as from other wild Nile crocodiles. The Okavango crocodiles were comparatively anaemic, and had comparatively low total protein and blood glucose levels. There was a high prevalence of Hepatozoon pettiti infection, however, there was no significant difference in haematological values between the infected and uninfected crocodiles. The values reported here will be useful in diagnostic investigations in both zoo and farmed Nile crocodiles.

Mosquitoes and the environment in Nile Delta villages with previous rift valley fever activity

USDA-ARS?s Scientific Manuscript database

Egypt is affected by serious human and animal mosquito-borne diseases such as Rift Valley fever (RVF). We investigated how potential RVF virus mosquito vector populations are affected by environmental conditions in the Nile Delta region of Egypt by collecting mosquitoes and environmental data from t...

Investigation of potential sea level rise impact on the Nile Delta, Egypt using digital elevation models.

PubMed

Hasan, Emad; Khan, Sadiq Ibrahim; Hong, Yang

2015-10-01

In this study, the future impact of Sea Level Rise (SLR) on the Nile Delta region in Egypt is assessed by evaluating the elevations of two freely available Digital Elevation Models (DEMs): the SRTM and the ASTER-GDEM-V2. The SLR is a significant worldwide dilemma that has been triggered by recent climatic changes. In Egypt, the Nile Delta is projected to face SLR of 1 m by the end of the 21th century. In order to provide a more accurate assessment of the future SLR impact on Nile Delta's land and population, this study corrected the DEM's elevations by using linear regression model with ground elevations from GPS survey. The information for the land cover types and future population numbers were derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) land cover and the Gridded Population of the Worlds (GPWv3) datasets respectively. The DEM's vertical accuracies were assessed using GPS measurements and the uncertainty analysis revealed that the SRTM-DEM has positive bias of 2.5 m, while the ASTER-GDEM-V2 showed a positive bias of 0.8 m. The future inundated land cover areas and the affected population were illustrated based on two SLR scenarios of 0.5 m and 1 m. The SRTM DEM data indicated that 1 m SLR will affect about 3900 km(2) of cropland, 1280 km(2) of vegetation, 205 km(2) of wetland, 146 km(2) of urban areas and cause more than 6 million people to lose their houses. The overall vulnerability assessment using ASTER-GDEM-V2 indicated that the influence of SLR will be intense and confined along the coastal areas. For instance, the data indicated that 1 m SLR will inundate about 580 Km(2) (6%) of the total land cover areas and approximately 887 thousand people will be relocated. Accordingly, the uncertainty analysis of the DEM's elevations revealed that the ASTER-GDEM-V2 dataset product was considered the best to determine the future impact of SLR on the Nile Delta region.

Assessment of Undiscovered Oil and Gas Resources of the Nile Delta Basin Province, Eastern Mediterranean

USGS Publications Warehouse

Kirschbaum, Mark A.; Schenk, Christopher J.; Charpentier, Ronald R.; Klett, Timothy R.; Brownfield, Michael E.; Pitman, Janet K.; Cook, Troy A.; Tennyson, Marilyn E.

2010-01-01

The U.S. Geological Survey estimated means of 1.8 billion barrels of recoverable oil, 223 trillion cubic feet of recoverable gas, and 6 billion barrels of natural gas liquids in the Nile Delta Basin Province using a geology-based assessment methodology.

Maturation history of Neogene-Quaternary sediments, Nile delta basin, Egypt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ramadan Abu El-Ella

1990-01-01

The present Nile delta area covers approximately 60,000 km{sup 2}. Fields in this area provide two-thirds of the gas production in Egypt. Geological knowledge of the Nile delta is still limited because of insufficient subsurface data. Gas is generated and accumulates at stratigraphic levels ranging from the lower Miocene to the lower Pliocene. The highest levels of organic maturation in the Neogene-Quaternary section are in the northern part of the onshore area, such as in the Abu Madi well, and in the eastern part of the offshore area, such as in the El Temsah well, where gas reservoirs occur inmore » the lower Pliocene sandstones (Abu Madi Formation), and in the underlying Sidi Salem Formation and lower Miocene rocks. Here, the Sidi Salem Formation is probably generative, having an R{sub 0} of approximately 0.65%, LOM (levels of organic metamorphism) of 9.5 to 9.7, and TTI (time-temperature index) of 9.7 to 15.2. By contrast, a different thermal history clearly existed in the western and eastern parts of the onshore area, such as in the Monaga and Damanhur wells, where the organic maturities are significantly lower than maturities elsewhere in the basin (R{sub 0} = 0.38 and 0.29%, respectively). The predicted maturities obtained by using the LOM method seem to fit much closer to the observed maturities than the predicted maturities obtained by using the Lopatin TTI method. 5 figs.« less

Primary production of phytoplankton in the estuaries of different types (by the example of the Curonian and Vistula Lagoons of the Baltic Sea and the Volga delta)

NASA Astrophysics Data System (ADS)

Aleksandrov, Sergei; Gorbunova, Julia

2016-04-01

The aim was to analyze the long-term change of the primary production in large estuaries of different types (Volga delta, Curonian and Vistula Lagoons) under the impact of environmental factors (e.g. climate changes, algal blooms, invasion mollusk). The researches (primary production, chlorophyll, nutrients and others) were carried out monthly from March-April to November in the Vistula and Curonian Lagoons since 1991 to 2015, and in the Lower part of the Volga Delta and fore-delta since 1996 to 2007. The Volga River is the largest river in Europe that flows into the Caspian Sea and it forms a great delta. According to the analysis of long-term data (from the 1960s), the maximum eutrophication and primary production (85-100 gCṡm-2ṡyear-1) in the Volga Delta was observed in the 1980s. In the 1990s, fertilizers use and the input of nutrients into the Volga Delta decreased significantly. Due of the high-flow exchange in the delta, especially during high-water years, observed in the 1980s - early 2000s, this led to a significant decrease in the concentration of nutrients in the water in the Volga Delta. As a result, in the 1990-2000s, the primary production has decreased to the level of 1960s-1970s (40-60 gCṡm-2ṡyear-1) and the process of eutrophication was replaced by de-eutrophication. At present, the trophic status of the Volga delta assessed as mesotrophic. The future trend of phytoplankton primary production of the Volga delta will greatly depend on the scenario of nutrients loading and river runoff. The Curonian Lagoon and Vistula Lagoon are the largest coastal lagoons of the Baltic Sea, relating to the most highly productive water bodies of Europe. The Curonian Lagoon is choke mostly freshwater lagoon, while the Vistula Lagoon is restricted brackish water lagoon. In the last decades the nutrients loading changes, warming trend and biological invasions are observed. The Curonian Lagoon may be characterized as hypertrophic water body. The local climate

Evaluating geophysical lithology determination methods in the central offshore Nile Delta, Egypt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nada, H.; Shrallow, J.

1994-12-31

Two post stack and one prestack geophysical techniques were used to extract lithology and fluid information from seismic data. The purpose of this work was to evaluate the effectiveness of such methods in helping to find more hydrocarbons and reduce exploration risk in Egypt`s Nile Delta. Amplitude Variations with Offset (AVO) was used as a direct hydrocarbon indicator. CDP gathers were sorted into common angle gathers. The angle traces from 0--10 degrees were stacked to form a near angle stack and those from 30--40 degrees were stacked to form a far angle stack. Comparison of the far and near anglemore » stacks indicate areas which have seismic responses that match gas bearing sand models in the Pliocene and Messinian. Seismic Sequence Attribute mapping was used to measure the reflectivity of a seismic sequence. The specific sequence attribute measured in this study was the Maximum Absolute Amplitude of the seismic reflections within a sequence. Post stack seismic inversion was used to convert zero phase final migrated data to pseudo acoustic impedance data to interpret lithology from seismic data. All three methods are useful in the Nile Delta for identifying sand prone areas, but only AVO can be used to detect fluid content.« less

Serum Cadmium Levels in Pancreatic Cancer Patients from the East Nile Delta Region of Egypt

PubMed Central

Kriegel, Alison M.; Soliman, Amr S.; Zhang, Qing; El-Ghawalby, Nabih; Ezzat, Farouk; Soultan, Ahmed; Abdel-Wahab, Mohamed; Fathy, Omar; Ebidi, Gamal; Bassiouni, Nadia; Hamilton, Stanley R.; Abbruzzese, James L.; Lacey, Michelle R.; Blake, Diane A.

2006-01-01

The northeast Nile Delta region exhibits a high incidence of early-onset pancreatic cancer. It is well documented that this region has one of the highest levels of pollution in Egypt. Epidemiologic studies have suggested that cadmium, a prevalent pollutant in the northeast Nile Delta region, plays a role in the development of pancreatic cancer. Objective: We aimed to assess serum cadmium levels as markers of exposure in pancreatic cancer patients and noncancer comparison subjects from the same region in Egypt. Design and Participants: We assessed serum cadmium levels of 31 newly diagnosed pancreatic cancer patients and 52 hospital comparison subjects from Mansoura, Egypt. Evaluation/Measurements: Serum cadmium levels were measured using a novel immunoassay procedure. Results: We found a significant difference between the mean serum cadmium levels in patients versus comparison subjects (mean ± SD, 11.1 ± 7.7 ng/mL vs. 7.1 ± 5.0 ng/mL, respectively; p = 0.012) but not in age, sex, residence, occupation, or smoking status. The odds ratio (OR) for pancreatic cancer risk was significant for serum cadmium level [OR = 1.12; 95% confidence interval (CI), 1.04–1.23; p = 0.0089] and farming (OR = 3.25; 95% CI, 1.03–11.64; p = 0.0475) but not for age, sex, residence, or smoking status. Conclusions: The results from this pilot study suggest that pancreatic cancer in the East Nile Delta region is significantly associated with high levels of serum cadmium and farming. Relevance to Clinical Practice/Public Health: Future studies should further investigate the etiologic relationship between cadmium exposure and pancreatic carcinogenesis in cadmium-exposed populations. PMID:16393667

The initiation and evolution of the River Nile

NASA Astrophysics Data System (ADS)

Fielding, Laura; Najman, Yani; Millar, Ian; Butterworth, Peter; Garzanti, Eduardo; Vezzoli, Giovanni; Barfod, Dan; Kneller, Ben

2018-05-01

The Nile is generally regarded as the longest river in the world. Knowledge of the timing of the Nile's initiation as a major river is important to a number of research questions. For example, the timing of the river's establishment as a catchment of continental proportions can be used to document surface uplift of its Ethiopian upland drainage, with implications for constraining rift tectonics. Furthermore, the time of major freshwater input to the Mediterranean is considered to be an important factor in the development of sapropels. Yet the river's initiation as a major drainage is currently constrained no more precisely than Eocene to Pleistocene. Within the modern Nile catchment, voluminous Cenozoic Continental Flood Basalts (CFBs) are unique to the Ethiopian Highlands; thus first detection of their presence in the Nile delta record indicates establishment of the river's drainage at continental proportions at that time. We present the first detailed multiproxy provenance study of Oligocene-Recent Nile delta cone sediments. We demonstrate the presence of Ethiopian CFB detritus in the Nile delta from the start of our studied record (c. 31 Ma) by (1) documenting the presence of zircons with U-Pb ages unique, within the Nile catchment, to the Ethiopian CFBs and (2) using Sr-Nd data to construct a mixing model which indicates a contribution from the CFBs. We thereby show that the Nile river was established as a river of continental proportions by Oligocene times. We use petrography and heavy mineral data to show that previous petrographic provenance studies which proposed a Pleistocene age for first arrival of Ethiopian CFBs in the Nile delta did not take into account the strong diagenetic influence on the samples. We use a range of techniques to show that sediments were derived from Phanerozoic sedimentary rocks that blanket North Africa, Arabian-Nubian Shield basement terranes, and Ethiopian CFB's. We see no significant input from Archaean cratons supplied

Water Management Strategy in Assessing the Water Scarcity in Northern Western Region of Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Mabrouk, Badr; Arafa, Salah; Gemajl, Khaled

2015-04-01

Sustainable development in the Nile Delta of Egypt is retarded by serious environmental problems, where land-use and land-cover of the region are subjected to continuous changes; including shoreline changes either by erosion or accretion, subsidence of the delta, as well as by sea level rise due to climate change. The current research attempts to; (1) study the vulnerability of the northern western region of the Nile Delta coastal zone to climate change/sea level rise while setting basic challenges, review adaptation strategies based on adaptation policy framework, and highlight recommended programs for preparedness to climate change, (2) study the scarcity of water resources in the area of study with review of the socioeconomic impacts and the critical need of establishing desalination plants with new standards assessing the environmental situation and population clusters, and (3) monitor of the brine water extracted from the desalination plants and injected to subsurface strata. This monitoring process is divided into 3 main directions: 1) studying the chemical characteristics of water extracted from the water desalinations plants qualitatively and quantitatively. 2) mapping the subsurface of which that brine water will be injected to it and the flow directions and effects using resistivity data, and 3) using GIS and suitable numerical models in order to study the effect, volume, flow of the brine water and its long term environmental impacts on the area. The results indicate that the area is particularly vulnerable to the impact of SLR, salt water intrusion, the deterioration of coastal tourism and the impact of extreme dust storms. This in turn will directly affect the agricultural productivity and human settlements in coastal zones. The paper presents different scenarios for water management and recommends the most suitable scenarios in order to establish a core for water management strategy in the region according to existing socio-economic and environmental

Ocean-color remote sensing of the Nile delta shelf and SE Levantine basin and possible linkage to some mesoscale circulation features and Nile river run-off

NASA Astrophysics Data System (ADS)

Moufaddal, Wahid; Lavender, Samantha

To date, and despite the passage of more than 30 years since the launch of the first satellite based ocean-color sensor, no systematic study of the variability of chlorophyll in the Egyptian Mediterranean coast off the Nile delta has been undertaken using this kind of data. Meantime, available in-situ measurements on chlorophyll and other nutrient parameters along this coast are indeed very modest and scarce. The lack of data has in turn created a large gap in our knowledge on the biogeochemical characteristics of the coastal water and impacts of the Aswan High Dam and other land-use changes on the marine ecosystems and nutrient budget in the Nile delta shelf and the SE Mediterranean. The present study aims to fill part of this gap through application of ocean-color remote sensing and satellite retrieval of phytoplankton chlorophyll. For this purpose a 10-year (1997-2006) monthly satellite dataset from ESA Globcolour project (an ESA Data User Element project: http://www.globcolour.info) was retrieved and subjected to time-series analysis. Results of this analysis revealed that the oceanic and coastal parts off the Nile delta coast and SE Mediterranean manifest from time to time some of the most interesting and dynamical marine features including meso-scale gyres, coastal filaments, localized algal blooms and higher concentration of phytoplankton chlorophyll. These features together with certain physical pro-cesses and surface run-off from Nile mouthes and other land-based sources were found to exert pronounced effects on the nutrient supply and quality of the coastal and oceanic surface waters in this region. Results reveled also that there has been a general upward trend in concentration of surface chlorophyll during the 10-year period from 1997 to 2006 with a coincident rise of the coastal fisheries implying that improvement of nutrient supply is most likely responsible for this rise. Results confirmed also shift of the Nile phytoplankton bloom in space and time

Epidemiology of bovine fascioliasis in the Nile Delta region of Egypt: Its prevalence, evaluation of risk factors, and its economic significance

PubMed Central

El-Tahawy, Abdelgawad S.; Bazh, Eman K.; Khalafalla, Reda E.

2017-01-01

Aim: This study focuses on the risk factors associated with the prevalence of Fasciola affecting cattle population in three provinces belonging to the Nile Delta of Egypt and to estimate the economic losses as a result of fascioliasis. Materials and Methods: From January 2015 to end of December 2015, records of 21 farms (4976 cattle) were analyzed to screen the prevalence of fascioliasis among cattle farms, to identify its associated risk factors and its economic impacts on Nile Delta region of Egypt. Results: The overall prevalence of fascioliasis in the Nile Delta region of Egypt was 9.77%. The prevalence of fascioliasis was found to be statistically significantly associated with age, sex, breed, and type of farms. The highest prevalence was observed in <2 age group (10.91%), and the lowest was >3 age groups (8.35%). In terms of body condition scores, cattle with medium and poor conditions were associated with fascioliasis more than those with good body condition. Besides, cattle raised in organic farms were associated with lower risk of fascioliasis than those in conventional farms. The prevalence of fascioliasis was noted more prominent in districts with moderate temperatures and with relative humidity (>60%). The annual overall costs for fascioliasis were estimated to be 221.2 USD/cow due to the significant reduction in body weight, reduction in milk production, and the treatment costs for fascioliasis. Conclusion: The results provided could be helpful for improving the control and preventive strategies. PMID:29184371

Epidemiology of bovine fascioliasis in the Nile Delta region of Egypt: Its prevalence, evaluation of risk factors, and its economic significance.

PubMed

El-Tahawy, Abdelgawad S; Bazh, Eman K; Khalafalla, Reda E

2017-10-01

This study focuses on the risk factors associated with the prevalence of Fasciola affecting cattle population in three provinces belonging to the Nile Delta of Egypt and to estimate the economic losses as a result of fascioliasis. From January 2015 to end of December 2015, records of 21 farms (4976 cattle) were analyzed to screen the prevalence of fascioliasis among cattle farms, to identify its associated risk factors and its economic impacts on Nile Delta region of Egypt. The overall prevalence of fascioliasis in the Nile Delta region of Egypt was 9.77%. The prevalence of fascioliasis was found to be statistically significantly associated with age, sex, breed, and type of farms. The highest prevalence was observed in <2 age group (10.91%), and the lowest was >3 age groups (8.35%). In terms of body condition scores, cattle with medium and poor conditions were associated with fascioliasis more than those with good body condition. Besides, cattle raised in organic farms were associated with lower risk of fascioliasis than those in conventional farms. The prevalence of fascioliasis was noted more prominent in districts with moderate temperatures and with relative humidity (>60%). The annual overall costs for fascioliasis were estimated to be 221.2 USD/cow due to the significant reduction in body weight, reduction in milk production, and the treatment costs for fascioliasis. The results provided could be helpful for improving the control and preventive strategies.

Nile Delta

NASA Image and Video Library

2013-06-19

Urbanized areas of northern Egypt are visible amidst the deserts of Egypt. The image captured July 9-15, 2012 also shows the Nile River which provides life-sustaining water to the region. The image was created from the Visible-Infrared Imager/Radiometer Suite (VIIRS) instrument aboard the Suomi National Polar-orbiting Partnership or Suomi NPP satellite, a partnership between NASA and the National Oceanic and Atmospheric Administration, or NOAA. Credit: NASA/NOAA To read more go to: www.nasa.gov/mission_pages/NPP/news/vegetation.html NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Mineralogy and source rock evaluation of the marine Oligo-Miocene sediments in some wells in the Nile Delta and North Sinai, Egypt

NASA Astrophysics Data System (ADS)

El sheikh, Hassan; Faris, Mahmoud; Shaker, Fatma; Kumral, Mustafa

2016-06-01

This paper aims to study the mineralogical composition and determine the petroleum potential of source rocks of the Oligocene-Miocene sequence in the Nile Delta and North Sinai districts. The studied interval in the five wells can be divided into five rock units arranged from the top to base; Qawasim, Sidi Salem, Kareem, Rudeis, and Qantara formations. The bulk rock mineralogy of the samples was investigated using X-Ray Diffraction technique (XRD). The results showed that the sediments of the Nile Delta area are characterized by the abundance of quartz and kaolinite with subordinate amounts of feldspars, calcite, gypsum, dolomite, and muscovite. On the other hand, the data of the bulk rock analysis at the North Sinai wells showed that kaolinite, quartz, feldspar and calcite are the main constituents associated with minor amounts of dolomite, gypsum, mica, zeolite, and ankerite. Based on the organic geochemical investigations (TOC and Rock-Eval pyrolysis analyses), all studied formations in both areas are thermally immature but in the Nile delta area, Qawasim, Sidi Salem and Qantara formations (El-Temsah-2 Well) are organically-rich and have a good petroleum potential (kerogen Type II-oil-prone), while Rudeis Formation is a poor petroleum potential source rock (kerogen Type III-gas-prone). In the North Sinai area, Qantara Formation has a poor petroleum potential (kerogen Type III-gas-prone) and Sidi Salem Formation (Bardawil-1 Well) is a good petroleum potential source rock (kerogen Type II-oil-prone).

Harmful Algae Records in Venice Lagoon and in Po River Delta (Northern Adriatic Sea, Italy)

PubMed Central

Bilaničovà, Dagmar; Marcomini, Antonio

2014-01-01

A detailed review of harmful algal blooms (HAB) in northern Adriatic Sea lagoons (Po River Delta and Venice lagoon) is presented to provide “updated reference conditions” for future research and monitoring activities. In the study areas, the high mollusc production requires the necessity to identify better methods able to prevent risks for human health and socioeconomical interests. So, an integrated approach for the identification and quantification of algal toxins is presented by combining microscopy techniques with Liquid Chromatography coupled with High Resolution Time of Flight Mass Spectrometry (HPLC-HR-TOF-MS). The method efficiency was first tested on some samples from the mentioned coastal areas, where Dinophysis spp. occurred during summer in the sites directly affected by seawaters. Although cell abundance was always <200 cells/L, the presence of Pectenotoxin-2 (PTX2), detected by HPLC-HR-TOF-MS, indicated the potential release of detectable amounts of toxins even at low cell abundance. PMID:24683360

Harmful algae records in Venice lagoon and in Po River Delta (northern Adriatic Sea, Italy).

PubMed

Facca, Chiara; Bilaničovà, Dagmar; Pojana, Giulio; Sfriso, Adriano; Marcomini, Antonio

2014-01-01

A detailed review of harmful algal blooms (HAB) in northern Adriatic Sea lagoons (Po River Delta and Venice lagoon) is presented to provide "updated reference conditions" for future research and monitoring activities. In the study areas, the high mollusc production requires the necessity to identify better methods able to prevent risks for human health and socioeconomical interests. So, an integrated approach for the identification and quantification of algal toxins is presented by combining microscopy techniques with Liquid Chromatography coupled with High Resolution Time of Flight Mass Spectrometry (HPLC-HR-TOF-MS). The method efficiency was first tested on some samples from the mentioned coastal areas, where Dinophysis spp. occurred during summer in the sites directly affected by seawaters. Although cell abundance was always <200 cells/L, the presence of Pectenotoxin-2 (PTX2), detected by HPLC-HR-TOF-MS, indicated the potential release of detectable amounts of toxins even at low cell abundance.

Assessment of the trophic status of four coastal lagoons and one estuarine delta, eastern Brazil.

PubMed

Cotovicz Junior, Luiz Carlos; Brandini, Nilva; Knoppers, Bastiaan Adriaan; Mizerkowski, Byanka Damian; Sterza, José Mauro; Ovalle, Alvaro Ramon Coelho; Medeiros, Paulo Ricardo Petter

2013-04-01

Anthropogenic eutrophication of aquatic ecosystems continues to be one of the major environmental issues worldwide and also of Brazil. Over the last five decades, several approaches have been proposed to discern the trophic state and the natural and cultural processes involved in eutrophication, including the multi-parameter Assessment of Estuarine Trophic Status (ASSETS) index model. This study applies ASSETS to four Brazilian lagoons (Mundaú, Manguaba, Guarapina, and Piratininga) and one estuarine delta (Paraíba do Sul River), set along the eastern Brazilian coast. The model combines three indices based on the pressure-state-response (PSR) approach to rank the trophic status and forecast the potential eutrophication of a system, to which a final ASSETS grade is established. The lagoons were classified as being eutrophic and highly susceptible to eutrophication, due primarily to their longer residence times but also their high nutrient input index. ASSETS classified the estuary of the Paraíba do Sul river with a low to moderate trophic state (e.g., largely mesotrophic) and low susceptibility to eutrophication. Its nutrient input index was high, but the natural high dilution and flushing potential driven by river flow mitigated the susceptibility to eutrophication. Eutrophication forecasting provided more favorable trends for the Mundaú and Manguaba lagoons and the Paraíba do Sul estuary, in view of the larger investments in wastewater treatment and remediation plans. The final ASSETS ranking system established the lagoons of Mundaú as "moderate," Manguaba as "bad," Guarapina as "poor," and Piratininga as "bad," whereas the Paraíba do Sul River Estuary was "good."

The Nile River

NASA Technical Reports Server (NTRS)

2002-01-01

This image of the northern portion of the Nile River was captured by MISR's nadir camera on January 30, 2001 (Terra orbit 5956). The Nile is the longest river in the world, extending for about 6700 kilometers from its headwaters in the highlands of eastern Africa. At the apex of the fertile Nile River Delta is the Egyptian capital city of Cairo. To the west are the Great Pyramids of Giza. North of here the Nile branches into two distributaries, the Rosetta to the west and the Damietta to the east. Also visible in this image is the Suez Canal, a shipping waterway connecting Port Said on the Mediterranean Sea with the Gulf of Suez. The Gulf is an arm of the Red Sea, and is located on the righthand side of the picture. Image credit: NASA/GSFC/LaRC/JPL, MISR Team.

Shallow groundwater investigation using time-domain electromagnetic (TEM) method at Itay El-Baroud, Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Shaaban, H.; El-Qady, G.; Al-Sayed, E.; Ghazala, H.; Taha, A. I.

2016-12-01

The Nile Delta is one of the oldest known ancient delta, largest and most important depositional complex in the Mediterranean sedimentary basin. Furthermore, it is a unique site in Egypt that is suitable for accumulation and preservation of the Quaternary sediments. In this work we applied time-domain electromagnetic (TEM) method to investigate the Quaternary sediments sequence as well as detecting the groundwater aquifer in the area of study. A suite of 232 TEM sounding at 43 stations were carried out using a ;SIROTEM MK-3; time-domain electromagnetic system. A simple coincident loop configuration, in which the same loop transmits and receives signals, was employed with loop side length of 25 m. The 1-D modeling technique was applied to estimate the depth and the apparent resistivity of the interpreted geoelectrical data. Based on the interpretation of the acquired geophysical data, four geoelectric cross-sections were constructed. These sections show that the Upper Quaternary sequence consists of three geoelectric layers. The Holocene Nile mud is separated into two layers: the agricultural root zone (Layer 1) and thick water saturated mud (Layer 2). The Upper Pleistocene sandy aquifer (Layer 3) is very complicated non-linear boundary. This aquifer is the most important unit since it is considered as the main water bearing unit in the study area.

Impacts of seawater rise on seawater intrusion in the Nile Delta Aquifer, Egypt.

PubMed

Sefelnasr, Ahmed; Sherif, Mohsen

2014-01-01

Several investigations have recently considered the possible impacts of climate change and seawater level rise on seawater intrusion in coastal aquifers. All have revealed the severity of the problem and the significance of the landward movement of the dispersion zone under the condition of seawater level rise. Most of the studies did not consider the possible effects of the seawater rise on the inland movement of the shoreline and the associate changes in the boundary conditions at the seaside and the domain geometry. Such effects become more evident in flat, low land, coastal alluvial plans where large areas might be submerged with seawater under a relatively small increase in the seawater level. None of the studies combined the effect of increased groundwater pumping, due to the possible decline in precipitation and shortage in surface water resources, with the expected landward shift of the shore line. In this article, the possible effects of seawater level rise in the Mediterranean Sea on the seawater intrusion problem in the Nile Delta Aquifer are investigated using FEFLOW. The simulations are conducted in horizontal view while considering the effect of the shoreline landward shift using digital elevation models. In addition to the basic run (current conditions), six different scenarios are considered. Scenarios one, two, and three assume a 0.5 m seawater rise while the total pumping is reduced by 50%, maintained as per the current conditions and doubled, respectively. Scenarios four, five, and six assume a 1.0 m seawater rise and the total pumping is changed as in the first three scenarios. The shoreline is moved to account for the seawater rise and hence the study domain and the seaside boundary are modified accordingly. It is concluded that, large areas in the coastal zone of the Nile Delta will be submerged by seawater and the coast line will shift landward by several kilometers in the eastern and western sides of the Delta. Scenario six represents

An approach for delineating drinking water wellhead protection areas at the Nile Delta, Egypt.

PubMed

Fadlelmawla, Amr A; Dawoud, Mohamed A

2006-04-01

In Egypt, production has a high priority. To this end protecting the quality of the groundwater, specifically when used for drinking water, and delineating protection areas around the drinking water wellheads for strict landuse restrictions is essential. The delineation methods are numerous; nonetheless, the uniqueness of the hydrogeological, institutional as well as social conditions in the Nile Delta region dictate a customized approach. The analysis of the hydrological conditions and land ownership at the Nile Delta indicates the need for an accurate methodology. On the other hand, attempting to calculate the wellhead protected areas around each of the drinking wells (more than 1500) requires data, human resources, and time that exceed the capabilities of the groundwater management agency. Accordingly, a combination of two methods (simplified variable shapes and numerical modeling) was adopted. Sensitivity analyses carried out using hypothetical modeling conditions have identified the pumping rate, clay thickness, hydraulic gradient, vertical conductivity of the clay, and the hydraulic conductivity as the most significant parameters in determining the dimensions of the wellhead protection areas (WHPAs). Tables of sets of WHPAs dimensions were calculated using synthetic modeling conditions representing the most common ranges of the significant parameters. Specific WHPA dimensions can be calculated by interpolation, utilizing the produced tables along with the operational and hydrogeological conditions for the well under consideration. In order to simplify the interpolation of the appropriate dimensions of the WHPAs from the calculated tables, an interactive computer program was written. The program accepts the real time data of the significant parameters as its input, and gives the appropriate WHPAs dimensions as its output.

The Nile

NASA Technical Reports Server (NTRS)

2001-01-01

This image of the northern portion of the Nile River was captured by MISR's nadir camera on January 30, 2001 (Terra orbit 5956). The Nile is the longest river in the world, extending for about 6700 kilometers from its headwaters in the highlands of eastern Africa.

At the apex of the fertile Nile River Delta is the Egyptian capital city of Cairo. To the west are the Great Pyramids of Giza. North of here the Nile branches into two distributaries, the Rosetta to the west and the Damietta to the east.

Also visible in this image is the Suez Canal, a shipping waterway connecting Port Said on the Mediterranean Sea with the Gulf of Suez. The Gulf is an arm of the Red Sea, and is located on the righthand side of the picture.

MISR was built and is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Earth Science, Washington, DC. The Terra satellite is managed by NASA's Goddard Space Flight Center, Greenbelt, MD. JPL is a division of the California Institute of Technology.

Investigation of lagoon lakes in Kocacay delta by using remote sensing method.

PubMed

Irtem, Emel; Sacin, Yener

2012-04-01

Coasts are areas that are under the influence of the interaction of the air, water and land and attract attention with the abundance of their natural resources and therefore are subjected to excessive usage. This excessive usage may disturb the sensitive balance of the coast ecosystem. In this study, the changes in Arapçiftligi, Poyraz, Dalyan lakes area found in Kocacay delta located in the south coast of Marmara sea was evaluated between the periods of 2000 to 2007 with remote sensing method. These lakes, located on the shores, have a very sensitive naturally dynamic balance and very importance in terms of natural surroundings and the coastal zones management plan. It must be known the change of the lakes mentioned above area according to years. Research and applications have demonstrated the advantages of remote sensing and geographic information system techiques on river,delta, lake, lagoon lake, sensitivite areas in a lakeshore, coastal erosion etc. monitoring and management. In the study, we benefited from Erdas and Intergraph-Geomedia 6.1 image processing and GIS, and also from AutoCAD 2007 and NetCAD 4.0 computer-aided design (CAD) software. For 2000, 2001, 2005 and 2007 years (4 number) Landsat-5 TM satellite images belonging to the region were used. As a result of the study, Arapçiftligi, Dalyan and Poyraz lake areas, number of islets that are seen in the lakes were given in respect to years. Arapçiftligi lake shrank 29.5% in size in the years 2000 and 2007. The fact that the lake continued to get smaller in size even in periods of high precipitation may be due to the sediment flowing from the agricultural fields established close to the lake area. Dalyan and Poyraz lakes lost 60% in terms of their surface area in the years 2000 and 2007. In 2000-2001 periods, Dalyan and Poyraz lakes increased in size by 3.2%. The reason for this could be the excessive precipitation and the fact that the seawater from Marmara sea seeps into the lake. Protection of the

Elemental Analysis and Radionuclides Monitoring of Beach Black Sand at North of Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Ali, Abdallah; Fayez-Hassan, M.; Mansour, N. A.; Mubarak, Fawzia; Ahmed, Talaat Salah; Hassanin, W. F.

2017-12-01

A study was carried out on the concentrations of elements presented in beach black sand samples collected from North of Nile Delta along Mediterranean Coast using instrumental neutron activation analysis (INAA) as an effective analysis technique, especially for monitoring elements. The Egyptian Research Reactor-2 (ETRR-2) as a facility was used for the samples irradiation in the thermal mode of a neutron flux 3 × 1011 n/cm2 s. Natural radioactive elements, rare element and heavy elements as U, Th, La, Lu, Sm, Ce, Nd, Eu, Gd, Sc, Tb, Yb, As, Br, Na, Sb, Ba, Co, Cr, Fe, Hg, Hf, Sr, Ta, Zn and Zr were determined with concentrations average values 16.3, 78.8, 195.4, 3.3, 31.3, 445.1, 223, 7.2, 8.5, 97.1, 3.6, 31.1, 6.1, 24.5, 27,236.8, 1.42, 1327.7, 81.1, 1814.3, 263,735, 0.1, 237.3, 878.7, 20.8, 671.1 and 6225.9 (mg/kg), respectively. The experimental data results were analyzed to evidence any correlations of these elements as well as to know the geological formation in the study area. The elements concentrations in the black sand samples were found higher than the world average crustal soil values except for As and Sb. Results were compared with similar beach black sand in previous studies. The enrichment factor (EF) and geoaccumulation index (I geo) for heavy elements were presented to evaluate the contamination rate. We can summarize that exposure for natural radionuclides (U and Th) in this area were still within the acceptable limits due to little time of exposure. Therefore, the black sands from North of Nile Delta are not recommended for use in building constructions due to high radioactive doses.

Serological tests for detecting Rift Valley fever viral antibodies in sheep from the Nile Delta.

PubMed Central

Scott, R M; Feinsod, F M; Allam, I H; Ksiazek, T G; Peters, C J; Botros, B A; Darwish, M A

1986-01-01

To determine the accuracy of serological methods in detecting Rift Valley fever (RVF) viral antibodies, we examined serum samples obtained from 418 sheep in the Nile Delta by using five tests. The plaque reduction neutralization test (PRNT) was considered the standard serological method against which the four other tests were compared. Twenty-four serum samples had RVF viral antibodies detected by PRNT. Hemagglutination inhibition and enzyme-linked immunosorbent assay antibodies to RVF virus were also present in the same 24 serum samples. Indirect immunofluorescence was less sensitive in comparison with PRNT, and complement fixation was the least sensitive. These results extend observations made with laboratory animals to a large field-collected group of Egyptian sheep. PMID:3533977

A Century of changes for Razelm-Sinoe Lagoon System

NASA Astrophysics Data System (ADS)

Scrieciu, Marian-Albert; Stanica, Adrian

2014-05-01

A Century of changes for Razelm-Sinoe Lagoon System Marian-Albert Scrieciu (a), Adrian Stanica (a) (a) National Institute of Marine Geology and Geoecology e GeoEcoMar, Str. Dimitrie Onciul 23e25, Sector 2, 024053 Bucharest, Romania Razelm-Sinoe Lagoon System, situated in the NW part of the Black Sea, in tight connection with the Danube Delta, has been subject to major changes due to human interventions in the past century. These changes have resulted into a complete change of the Lagoon specific ecosystems compared to its pristine state. In its natural state, as brackish - transitional environment, Antipa (1894) mentions Razelm Lagoon as one of the places with the greatest fisheries around the Black Sea coast (about 1879 - 1884, there were approximately 10,000 fishermen, all working on the Razelm Sinoe Lagoon System). Starting with the end of the XIXth Century, new canals were dug and existing channels were dredged in order to develop tighter connections with the Danube River. The natural inlet of Portita was blocked four decades ago and connections between the various parts of the lagoon system were controlled by the building of locks and sluices. The 2 inlets of Sinoe Lagoon were also controlled during early 1980s. Under these conditions, the lagoon ecosystem changed from brackish towards freshwater, with major effects on the existing flora and fauna. The period of brutal interventions ended in 1989 and the Razelm-Sinoe Lagoon System became part of the Danube Delta Biosphere Reserve in 1991, with a strict policy of nature protection and restoration. Spatial planning has been the major management option for the entire reserve, lagoon system included. Plans for sustainable development of the Razelm-Sinoe Lagoon System have been built in a participative manner, involving the local stakeholders, as part of FP7 ARCH project. Special attention has been given to impacts of climate change. The study presents the vision for the development Razelm-Sinoe Lagoon System over

Non-variceal upper gastrointestinal bleeding in cirrhotic patients in Nile Delta.

PubMed

Gabr, Mamdouh Ahmed; Tawfik, Mohamed Abd El-Raouf; El-Sawy, Abd Allah Ahmed

2016-01-01

Acute upper gastrointestinal bleeding (AUGIB) in cirrhotic patients occurs mainly from esophageal and gastric varices; however, quite a large number of cirrhotic patients bleed from other sources as well. The aim of the present work is to determine the prevalence of non-variceal UGIB as well as its different causes among the cirrhotic portal hypertensive patients in Nile Delta. Emergency upper gastrointestinal (UGI) endoscopy for AUGIB was done in 650 patients. Out of these patients, 550 (84.6%) patients who were proved to have cirrhosis were the subject of the present study. From all cirrhotic portal hypertensive patients, 415 (75.5%) bled from variceal sources (esophageal and gastric) while 135 (24.5%) of them bled from non-variceal sources. Among variceal sources of bleeding, esophageal varices were much more common than gastric varices. Peptic ulcer was the most common non-variceal source of bleeding. Non-variceal bleeding in cirrhosis was not frequent, and sources included peptic ulcer, portal hypertensive gastropathy, and erosive disease of the stomach and duodenum.

Climate Change Impacts, Vulnerabilities and Adaption Measures for Egypt's Nile Delta

NASA Astrophysics Data System (ADS)

Abutaleb, Khaled Abubakr Ali; Mohammed, Asmaa Hassan El-Sayed; Ahmed, Mahmoud H. Mohamed

2018-04-01

During the last few decades there has been growing concern about the impacts of climate change. A significant number of institutions, research centers, universities and governments have funded projects in addition to work done by independent scholars and assessors studying this phenomenon, in particular, to identify vulnerability, mitigation and adaptation against associated risks. Egypt is among the international community which took part in numerous studies, research activities, conferences, seminars and meetings attempting to address climate change and its associated risks. Egypt is particularly concerned with the threat to the Nile Delta as it is considered a low-lying land at high risk. The aim of this paper is to review current and previous projects, technical reports and pilot studies, concerning risk assessments, mitigation, and adaptation strategies for climate change in Egypt. This, in turn, will aid in decision making regarding future funding and establishing of research related to climate change in Egypt. This paper will also highlight the weaknesses and strengths of policymakers solely relying on one or more of these studies.

An Integrated Hydrological and Water Management Study of the Entire Nile River System - Lake Victoria to Nile Delta

NASA Technical Reports Server (NTRS)

Habib, Shahid; Zaitchik, Benjamin; Alo, Clement; Ozdogan, Mutlu; Anderson, Martha; Policelli, Fritz

2011-01-01

The Nile basin River system spans 3 million km(exp 2) distributed over ten nations. The eight upstream riparian nations, Ethiopia, Eretria, Uganda, Rwanda, Burundi, Congo, Tanzania and Kenya are the source of approximately 86% of the water inputs to the Nile, while the two downstream riparian countries Sudan and Egypt, presently rely on the river's flow for most of the their needs. Both climate and agriculture contribute to the complicated nature of Nile River management: precipitation in the headwaters regions of Ethiopia and Lake Victoria is variable on a seasonal and inter-annual basis, while demand for irrigation water in the arid downstream region is consistently high. The Nile is, perhaps, one of the most difficult trans-boundary water issue in the world, and this study would be the first initiative to combine NASA satellite observations with the hydrologic models study the overall water balance in a to comprehensive manner. The cornerstone application of NASA's Earth Science Research Results under this project are the NASA Land Data Assimilation System (LDAS) and the USDA Atmosphere-land Exchange Inverse (ALEXI) model. These two complementary research results are methodologically independent methods for using NASA observations to support water resource analysis in data poor regions. Where an LDAS uses multiple sources of satellite data to inform prognostic simulations of hydrological process, ALEXI diagnoses evapotranspiration and water stress on the basis of thermal infrared satellite imagery. Specifically, this work integrates NASA Land Data Assimilation systems into the water management decision support systems that member countries of the Nile Basin Initiative (NBI) and Regional Center for Mapping of Resources for Development (RCMRD, located in Nairobi, Kenya) use in water resource analysis, agricultural planning, and acute drought response to support sustainable development of Nile Basin water resources. The project is motivated by the recognition that

[Mangrove dynamics in the Cispata lagoon system (Colombian Caribbean) during last 900 years].

PubMed

Castaño, Ana; Urrego, Ligia; Bernal, Gladys

2010-12-01

The lagoon complex of Cispatá (old Sinú river delta) located at the Northwestern coast of the Colombian Caribbean, encloses one of the biggest mangrove areas in this region. This area has changed during the last 330 years because of several environmental and climatic causes, mainly changes in the position of the delta (Sinú River), which is the main freshwater source in this area, and sea level rise. We hypothesized that the climatic and geomorphologic dynamics has caused changes in the extension and composition of mangrove vegetation, especially during last 150 years. The dynamics of mangroves during the last 900 years was reconstructed based on the changes in the stratigraphy, pollen record, calcite concentrations (CaCO3) and C/N ratio, along two sediment cores from La Flotante and Navio lagoons, located in Cispatá complex. The age model was built based on lineal interpolation of 210Pb ages and changes in granulometry. Establishment and expansion of mangrove forests during the last 900 years were related to fluviomarine dynamics in the area and the lagoon formation. During the period encompassed between 1064 and 1762 A.D., the Mestizos spit was formed when marine conditions predominated in the surroundings of La Flotante Lagoon. At the site of Navío, a river dominated lagoon, terrigenous conditions dominated since 1830. Although the colonization of herbaceous pioneer vegetation started between 1142 and 1331 A.D., mangrove colonization only took place since 1717 A.D. Mangrove colonization was a result of the delta progradation. In 1849 A.D. the Sinú river delta migrated to the Cispatá bay. The eustatic sea level rise, the increase in river discharges and sedimentation rates produced the establishment of mangrove forests dominated by Rhizophora since 1849. Since 1900 a marine intrusion was recorded in both lagoons. In 1938, the migration of the delta toward its actual location in Tinajones gave place to the formation of the present lagoon system and to the

"Nile River Delta, Cairo and the Pyramids taken from Atlantis during STS-106"

NASA Image and Video Library

2000-09-09

STS106-701-025 (8-20 September 2000) --- One of the STS-106 crew members on board the Space Shuttle Atlantis used a handheld 70mm camera to photograph this image of Cairo, Egypt, the largest city in Africa. Its population is nearly 16 million, a figure which translates to approximately 130,000 people per square mile. Metropolitan Cairo shows as a gray area in the green of the Nile River valley at the apex of the Delta. The shadows of the three major pyramids at Giza on the Western edge of the city are visible. They are right below the bright new road construction. This side of the metropolitan area is experiencing rapid growth. According to geologists who have been studying shuttle-to-Earth imagery for many years, this photograph documents some of the many changes in land use in the Western Desert.

Origin of the Sinai-Negev erg, Egypt and Israel: mineralogical and geochemical evidence for the importance of the Nile and sea level history

USGS Publications Warehouse

Muhs, Daniel R.; Roskin, Joel; Tsoar, Haim; Skipp, Gary; Budahn, James R.; Sneh, Amihai; Porat, Naomi; Stanley, Jean-Daniel; Katra, Itzhak; Blumberg, Dan G.

2013-01-01

The Sinai–Negev erg occupies an area of 13,000 km2 in the deserts of Egypt and Israel. Aeolian sand of this erg has been proposed to be derived from the Nile Delta, but empirical data supporting this view are lacking. An alternative source sediment is sand from the large Wadi El Arish drainage system in central and northern Sinai. Mineralogy of the Negev and Sinai dunes shows that they are high in quartz, with much smaller amounts of K-feldspar and plagioclase. Both Nile Delta sands and Sinai wadi sands, upstream of the dunes, also have high amounts of quartz relative to K-feldspar and plagioclase. However, Sinai wadi sands have abundant calcite, whereas Nile Delta sands have little or no calcite. Overall, the mineralogical data suggest that the dunes are derived dominantly from the Nile Delta, with Sinai wadi sands being a minor contributor. Geochemical data that proxy for both the light mineral fraction (SiO2/10–Al2O3 + Na2O + K2O–CaO) and heavy mineral fraction (Fe2O3–MgO–TiO2) also indicate a dominant Nile Delta source for the dunes. Thus, we report here the first empirical evidence that the Sinai–Negev dunes are derived dominantly from the Nile Delta. Linkage of the Sinai–Negev erg to the Nile Delta as a source is consistent with the distribution of OSL ages of Negev dunes in recent studies. Stratigraphic studies show that during the Last Glacial period, when dune incursions in the Sinai–Negev erg began, what is now the Nile Delta area was characterized by a broad, sandy, minimally vegetated plain, with seasonally dry anastomosing channels. Such conditions were ideal for providing a ready source of sand for aeolian transport under what were probably much stronger glacial-age winds. With the post-glacial rise in sea level, the Nile River began to aggrade. Post-glacial sedimentation has been dominated by fine-grained silts and clays. Thus, sea level, along with favorable climatic conditions, emerges as a major influence on the timing of dune

Investigating the Origin of Natural and Anthropogenic Deformation across the Nile Delta Using Radar Interferometry, GRACE, Modeling, and Field data

NASA Astrophysics Data System (ADS)

Gebremichael, E.; Sultan, M.; Becker, R.; El Bastawesy, M.; Cherif, O.; Emil, M.; Ahmed, M.; Fathy, K.; Karki, S.; Chouinard, K.

2016-12-01

We applied an integrated approach (radar interferometry, flood simulation, GRACE, GIS) to investigate the nature and distribution of land deformation in the Nile Delta and to identify the natural and anthropogenic controlling factors. Our methodology involved: (1) applying persistent scatterer interferometry (PSI) across the entire Delta (scenes: 108 level 0 scenes; Tracks: 4 tracks; time period: 2003-2010); (2) correcting the interferometry output for various phase contributing errors (e.g., atmosphere, orbit, etc.) and calibrating/validating the output against 3 GNSS GPS stations (2 in Alexandria, 1 in Helwan); (3) conducting spatial correlation (in a GIS environment) of the radar outputs with relevant remote sensing, subsurface, and geologic datasets; (4) simulating flood depth and inundation to investigate the spatial extent and depth of the Holocene sediments using the HEC-RAS software (inputs: DEM and monthly discharge data; period: 1871-1902), (5) identifying subsurface structures by processing 712 gridded field gravity data points in Geosoft Oasis Montaj software (Bouguer anomaly analysis), and (6) analyzing monthly (2002-2015) GRACE-derived TWS solutions (0.5° x 0.5° CSR mascons). Our findings include: (1) three main structural trends (E-W, NW-SE and NE-SW trending) were mapped across the Delta, (2) areas of high subsidence coincide with the distribution of relatively thick recent sediments (<3000 years), probably due to sediment compaction, in three settings: (a) areas susceptible to flooding from the Damietta and Rosetta branches (e.g., east Damietta branch; latitude 30.8° to 31.2°; longitude 31.2° to 31.6°), (b) areas susceptible to sediment deposition at bifurcation locations of primary channels (e.g., near Cairo) and, (c) areas where mapped faults intersect Damietta and Rosetta channels, change their course, and cause ponding of surface water and sediment deposition, (3) extraction of gas from the Abu Madi gas field in north central delta

Earth view over Egypt and the Nile River taken during STS-121

NASA Image and Video Library

2006-07-04

STS121-334-026 (4-17 July 2006) --- This photo, featuring an easterly view of the Nile River, the Nile River Delta, Sinai Peninsula, the Suez Canal, Red Sea and part of the Mediterranean Sea, was taken by one of the STS-121 crewmembers aboard the Space Shuttle Discovery. Cairo, Egypt, can be seen at far right.

13. Sewage treatment lagoon, drainage control at center left, looking ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

13. Sewage treatment lagoon, drainage control at center left, looking south - Ellsworth Air Force Base, Delta Flight, Launch Control Facility, County Road CS23A, North of Exit 127, Interior, Jackson County, SD

An application of remotely derived climatological fields for risk assessment of vector-borne diseases : a spatial study of filariasis prevalence in the Nile Delta, Egypt.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crombie, M. K.; Gillies, R. R.; Arvidson, R. E.

1999-12-01

This paper applies a relatively straightforward remote sensing method that is commonly used to derive climatological variables. Measurements of surface reflectance and surface radiant temperature derived from Landsat Thematic Mapper data were used to create maps of fractional vegetation and surface soil moisture availability for the southern Nile delta in Egypt. These climatological variables were subsequently used to investigate the spatial distribution of the vector borne disease Bancroftian filariasis in the Nile delta where it is focally endemic and a growing problem. Averaged surface soil moisture values, computed for a 5-km border area around affected villages, were compared to filariasismore » prevalence rates. Prevalence rates were found to be negligible below a critical soil moisture value of 0.2, presumably because of a lack of appropriate breeding sites for the Culex Pipiens mosquito species. With appropriate modifications to account for local conditions and vector species, this approach should be useful as a means to map, predict, and control insect vector-borne diseases that critically depend on wet areas for propagation. This type of analysis may help governments and health agencies that are involved in filariasis control to better focus limited resources to identifiable high-risk areas.« less

Earth Observations taken by the Expedition 13 crew

NASA Image and Video Library

2006-09-04

ISS013-E-76441 (4 Sept. 2006) --- Aquaculture in the Nile delta, Egypt is featured in this image photographed by an Expedition 13 crewmember on the International Space Station. In the last three decades, a series of lagoons and lakes with greater and lesser connection to the sea have been greatly modified for the production of fish along the northeast coast of the Nile delta. Partial sunglint in this image reveals numerous details in one such fishery. Waves generated by northwesterly winds (lower left to upper right) have generated the frond-like sand spit along the coast (top). Faint sea swells are visible at upper left. Dark patches in the center are shadows cast by small clouds (also visible as dull white masses against the silver-grey sunglint). Dark curved lines on the inshore (western) side of the spit show prior positions of the spit. Most of Musallas Lagoon occupies the lower half of the image. By contrast with spit, the shores of the lagoon are everywhere occupied by a network of man-made structures--mainly short dikes enclosing hundreds of aquaculture ponds. The total area under fish production is estimated to be 8,000 hectares in the lagoon, which provides more than half of the aquaculture production for Egypt, largely in the form of two species of mullet. An outlet to the Mediterranean Sea (top right), allows sea-water recharge to the lagoon. Wind helps to circulate the water in this shallow lagoon--bright wind streaks on the lagoon (lower left) show this circulation driven by the north-northwest wind on this day.

The effect of lagoons on Adriatic Sea tidal dynamics

NASA Astrophysics Data System (ADS)

Ferrarin, Christian; Maicu, Francesco; Umgiesser, Georg

2017-11-01

In this study the effects that lagoons exert on the barotropic tidal dynamics of a regional sea, the Adriatic Sea, were numerically explored. This semi-enclosed basin is one of the places with the highest tidal range in the Mediterranean Sea and is characterised by the presence of several lagoons in its northern part. The tidal dynamics of a system comprising the whole Adriatic Sea and the lagoons of Venice, Marano-Grado and Po Delta were investigated using an unstructured hydrodynamic model. Numerical experiments with and without lagoons reveal that even if the considered shallow water bodies represent only the 0.5 and 0.002% of the Adriatic Sea surface and volume, respectively, they significantly affect the entire Northern Adriatic Sea tidal dynamics by enhancing tidal range (by 5%) and currents (by 10%). The inclusion of lagoons in the computation improved the model performance by 25% in reproducing tidal constituents in the Adriatic Sea. The back-effect of the lagoons on the open-sea tide is due to the waves radiating from the co-oscillating lagoons into the adjacent sea. This is the first time these processes are shown to be relevant for the Adriatic Sea, thus enhancing the understanding of the tidal dynamics in this regional sea. These findings may also apply to other coastal seas with connections to lagoons, bays and estuaries.

Nile Delta exhibited a spatial reversal in the rates of shoreline retreat on the Rosetta promontory comparing pre- and post-beach protection

NASA Astrophysics Data System (ADS)

Ghoneim, Eman; Mashaly, Jehan; Gamble, Douglas; Halls, Joanne; AbuBakr, Mostafa

2015-01-01

The coastline of the Nile Delta experienced accelerated erosion since the construction of the Aswan High Dam in 1964 and, consequently, the entrapment of a large amount of river sediments behind it. The coastline of the Rosetta promontory showed the highest erosion in the Delta with an average retreat rate of 137.4 m year- 1. In 1991, in an effort to mitigate sediment loss, a 4.85 km long seawall was built on the outer margin of the promontory. For additional beach protection, 15 groins were constructed along the eastern and western sides of the seawall in 2003 and 2005. To quantify erosion and accretion patterns along the Rosetta promontory, 11 Landsat images acquired at unequal intervals during a 40 year time span (1972 and 2012) were analyzed. The positions of shorelines were automatically extracted from satellite imagery and compared with three very high resolution QuickBird and WorldView2 images for data validation. Analysis of the rates of shoreline change revealed that the construction of the seawall was largely successful in halting the recession along the tip of the promontory, which lost 10.8 km2 prior to coastal protection. Conversely, the construction of the 15 groins has negatively affected the coastal morphology of the promontory and caused a reversal from accretion to fast erosion along the promontory leeside, where some segments of the shoreline have undergone as much as 30.8 m year- 1 of erosion. Without hard structures, the tip of the Rosetta promontory would have retreated 2.3 km by 2013 and lost 7.2 km2 of land. About 10% of this land is deltaic fertile cultivated farms. Moreover, without additional protection the sides of the promontory will lose about 1.3 km2 of land and the coastline would recede at an average rate of 200 m by 2020. Unless action is taken, coastal erosion, enhanced by rising sea level, will steadily eat away the Nile Delta at an alarming rate. The successful demonstration of the advocated procedures in this study could be

Source and migration of dissolved manganese in the Central Nile Delta Aquifer, Egypt

NASA Astrophysics Data System (ADS)

Bennett, P. C.; El Shishtawy, A. M.; Sharp, J. M.; Atwia, M. G.

2014-08-01

Dissolved metals in waters in shallow deltaic sediments are one of the world's major health problems, and a prime example is arsenic contamination in Bangladesh. The Central Nile Delta Aquifer, a drinking water source for more than 6 million people, can have high concentrations of dissolved manganese (Mn). Standard hydrochemical analyses coupled with sequential chemical extraction is used to identify the source of the Mn and to identify the probable cause of the contamination. Fifty-nine municipal supply wells were sampled and the results compared with published data for groundwaters and surface waters. Drill cuttings from 4 wells were collected and analyzed by sequential chemical extraction to test the hypothesized Mn-generating processes. The data from this research show that the Mn source is not deep saline water, microbial reduction of Mn oxides at the production depth, or leakage from irrigation drainage ditches. Instead, Mn associated with carbonate minerals in the surficial confining layer and transported down along the disturbed well annulus of the municipal supply wells is the likely source. This analysis provides a basis for future hydrogeological and contaminant transport modeling as well as remediation-modification of well completion practices and pumping schedules to mitigate the problem.

A Survey Study on Gastrointestinal Parasites of Stray Cats in Northern Region of Nile Delta, Egypt

PubMed Central

Khalafalla, Reda E.

2011-01-01

A survey study on gastrointestinal parasites in 113 faecal samples from stray cats collected randomly from Kafrelsheikh province, northern region of Nile delta of Egypt; was conducted in the period between January and May 2010. The overall prevalence was 91%. The results of this study reported seven helminth species: Toxocara cati (9%), Ancylostoma tubaeforme (4%), Toxascaris leonina (5%), Dipylidium caninum (5%), Capillaria spp. (3%), Taenia taeniformis (22%) and Heterophyes heterophyes (3%), four protozoal species: Toxoplasma gondii (9%), Sarcocyst spp. (1%), Isospora spp. (2%) and Giardia spp. (2%) and two arthropod species; Linguatula serrata (2%) and mites eggs (13%). The overall prevalence of intestinal parasites may continue to rise due to lack of functional veterinary clinics for cat care in Egypt. Therefore, there is a need to plan adequate control programs to diagnose, treat and control gastrointestinal parasites of companion as well as stray cats in the region. PMID:21760884

Contributions to integrative knowledge of West Nile virus reported in Romania - methods and tools for managing health-environment relationship at different spatial and temporal scales

NASA Astrophysics Data System (ADS)

Baltesiu, L.; Gomoiu, M. T.; Mudura, R.; Nicolescu, G.; Purcarea-Ciulacu, V.

2012-04-01

After 1990 there were environmental changes at national, European and global level which led to the emergence and re-emergence of infectious diseases. Among these diseases, those transmitted by vectors were installed on very large areas where pathogens entered the complex transmission cycles within the local ecosystems. Environmental changes were generated by climatic (temperature and precipitation), geomorphologic (altitude) and anthropogenic (land cover / land use) changes. Due to these environmental changes it became necessary to anticipate, prevent and control the epidemics in order to avoid major crises of natural and socio-economic systems. In these circumstances, the risk of re-emergence of West Nile virus infection increased, thus becoming a public health problem for Romania. Our research consisted in assessing this risk, depending on environmental changes that can influence the presence and space-time distribution as well as the dynamics of the elements of virus transmission cycle. Study areas were selected so that they should meet, on the one hand, very different natural ecosystems and on the other hand should include continuously changing anthropogenic ecosystems that provide optimal conditions for the vector-borne West Nile virus. These areas were: the Danube Delta including Razim-Sinoe complex (Tulcea County), Bucharest Metropolitan Area (BMA) (Bucharest and Ilfov & Giurgiu Counties). The Danube Delta lagoon area is the gateway to West Nile virus in Romania. During the neurological infection epidemic with West Nile virus in 1996, in BMA were recorded 60% of the total number of human cases. For the period 2009 - 2011 the authors developed risk maps to West Nile virus vectors to vertebrate hosts depending on climatic, geomorphologic and anthropogenic changes. Maps were made using ArcGis - ArcMap software, depending on the mean annual temperature and precipitation. We were used by the altitude risk map the hypsographic map of Romania and for the risk map

An-integrated seismic approach to de-risk hydrocarbon accumulation for Pliocene deep marine slope channels, offshore West Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Othman, Adel A. A.; Bakr, Ali; Maher, Ali

2017-12-01

The Nile Delta basin is a hydrocarbon rich province that has hydrocarbon accumulations generated from biogenic and thermogenic source rocks and trapped in a clastic channel reservoirs ranging in age from Pliocene to Early Cretaceous. Currently, the offshore Nile Delta is the most active exploration and development province in Egypt. The main challenge of the studied area is that we have only one well in a channel system exceeds fifteen km length, where seismic reservoir characterization is used to de-risk development scenarios for the field by discriminating between gas sand, water sand and shale. Extracting the gas-charged geobody from the seismic data is magnificent input for 3D reservoir static modelling. Seismic data, being non-stationary in nature, have varying frequency content in time. Spectral decomposition analysis unravels the seismic signal into its initial constituent frequencies. Frequency decomposition of a seismic signal aims to characterize the time-dependent frequency response of subsurface rocks and reservoirs for imaging and mapping of bed thickness, geologic discontinuities and channel connectivity. Inversion feasibility study using crossplot between P-wave impedance (Ip) and S-wave impedance (Is) which derived from well logs (P-wave velocity, S-wave velocity and density) is applied to investigate which inversion type would be sufficient enough to discriminate between gas sand, water sand and shale. Integration between spectral analysis, inversion results and Ip vs. Is crossplot cutoffs help to generate 3D lithofacies cubes, which used to extract gas sand and water sand geobodies, which is extremely wonderful for constructing facies depositional static model in area with unknown facies distribution and sand connectivity. Therefore de-risking hydrocarbon accumulation and GIIP estimation for the field became more confident for drilling new development wells.

Lagoonal deposits in the Upper Cretaceous Rock Springs Formation (Mesaverde Group), southwest Wyoming

USGS Publications Warehouse

Kirschbaum, M.A.

1989-01-01

Most paleogeographic reconstructions of the Rock Springs Formation show shorelines having lobate to arcuate deltas. These shorelines are oriented NE-SW, with the sea to the southeast. Brackish-water bodies are usually shown in interdistributary areas or associated with abandoned delta lobes, and are open to the sea. In this study, a sedimentary sequence 30-50 m thick is interpreted as interdeltaic deposits. Brackish-water deposits within the sequence are interpreted as interdeltaic lagoons rather than interdistributary bays. Three facies associations (units) are recognized in nine measured sections of the study interval. Unit A consists of interbedded sandstone, mudrock and coal which occur in both fining- and coarsening-upward sequences less than 10 m thick. Fining-upward sequences decrease in thickness and frequency upwards in unit A and are interpreted as distributary channels. Coarsening-upward sequences associated with the channels are interpreted as crevasse splays that filled lakes or interdistributary bays. In the upper part of the unit where only minor channels are present, the coarsening-upward sequences are interpreted as bay deltas. Unit B consists of fossiliferous silty shale and bioturbated sandy siltstone. A low-diversity fauna of bivalves, gastropods, ostracods and foraminifers indicates that brackish-water conditions existed. Unit B intertongues with unit A to the northwest and with unit C to the southeast, and is interpreted as lagoonal deposits. Unit C consists of crossbedded and burrowed sandstone in beds 0.5-9 m thick. Sandstones are laterally continuous in the southeast but become tabular bodies enclosed within unit B to the northwest. Laterally continuous sandstones are interpreted as shoreface deposits on the basis of multidirectional crossbeds, marine trace fossils and continuity. Tabular sandstones are interpreted as flood-tidal deltas on the basis of NW-oriented crossbeds, pinchouts to the northwest and enclosure within unit B. Scoured

Subsidence driving forces in large Delta Plain

NASA Astrophysics Data System (ADS)

Grall, C.; Steckler, M. S.

2017-12-01

Recent studies show large variability in subsidence rates among large delta plains that directly impact coastal management of these highly vulnerable environments. Observations show both significant spatial variation in subsidence across each delta, as well as large differences in magnitude between different deltas. This variability raises the question of what are the driving forces that control subsidence in large delta plains that this study aims to address. Subsidence and sediment compaction is studied in 4 end-member large Delta Plains: the Ganges-Brahmaputra, the Mekong, the Mississippi and the Nile. Those large delta plains drastically contrast in subsidence rates (from values to several mm/yr to several cm/yr), in the nature of the sediment (notably in clay and organic matter content), and in the volume of sediment supplied by the large rivers that feed those coastal environments. The volume of sediment deposited in each delta plain during the Holocene is estimated and the compaction of the underlying sedimentary column is computed by using a backstripping approach. Sediment compaction behaviors are defined accordingly to the observed clay, silt and organic contents, and the rate of subsidence associated with compaction is determined. Results suggest that about 2/3 of observed Holocene subsidence may be associated with the mechanical and chemical compaction of the underlying sedimentary column due to the load of sediment deposited. The compaction appears to be significantly higher in delta plains characterized by a high sediment input and a high organic matter and clay content. Thus, the observed subsidence rates in the (muddy) Mekong delta appear to be one order of magnitude higher than other delta plains. In contrast, subsidence rates are modest in the Ganges-Brahmaputra, the Mississippi and the Nile delta plains, except away from the major rivers where deposits are muddier.

Multi-centennial scale precipitation and following lagoon ecosystem fluctuation in the Holocene reconstructed by East Korean Lagoon sediment analysis

NASA Astrophysics Data System (ADS)

Katsuki, K.; Yang, D. Y.; Lim, J.; Nahm, W. H.; Nakanishi, T.; Seto, K.; Otsuka, M.; Kashima, K.

2014-12-01

change of diatom assemblage during the last 600 years has been well corresponded with the variation of Korean tree ring delta 14C. There is a high possibility that water quality and ecosystem in the Koran lagoons was controlled by 200-400 years periodical precipitation change, and they are further affected by the solar irradiance change may be via monsoon intensity change.

Developing Age Models to Utilize High Arctic Coastal Sediments for Paleoclimate Research: Results from the Colville Delta and Simpson Lagoon, Alaska

NASA Astrophysics Data System (ADS)

Miller, A. J.; Allison, M. A.; Bianchi, T. S.; Marcantonio, F.

2012-12-01

Sediment cores collected from Simpson Lagoon on the inner Beaufort Sea shelf adjacent to the Colville River delta, AK are being utilized to develop new, high-resolution (sub-decadal scale) archives of the 0-3,000 year Arctic paleoclimate record necessary to assess natural and anthropogenic climate variability. An imperative first step for developing a new paleoclimate archive is to establish methodologies for constraining the age-depth relationship. Naturally occurring and bomb-produced radioisotopes have been utilized in sediments to constrain downcore variability of accumulation rates on 100-103 y timescales, but this methodology is complicated by low activities of many of these tracers at high latitudes. The present study utilizes the combination of a (1) multi-tracer approach and a (2) tailored measurement strategy to overcome this limitation. 210Pb and 137Cs analyses were conducted on the fine (<32μm) sediment fraction to maximize measurable activity and to minimize radioisotope activity variability resulting from changes in grain size: 137Cs geochronologies proved more reliable in this setting and revealed mm/y sediment accumulation in the lagoon. To corroborate the 137Cs results, 239,240Pu activities were analyzed for selected sites using ICP-MS which has ultra-low detection limits, and yielded accumulation rates that matched the Cs geochronology. Age model development for the remainder of the core lengths (>~100 y in age) were completed using radiocarbon dating of benthic foraminifera tests, which proved the only datable in situ carbon available in this sediment archive. These dates have been used to constrain the ages of acoustic reflectors in CHIRP subbottom seismic records collected from the lagoon. Using this age control, spatial patterns of lagoonal sediment accumulation over the last ~3 ky were derived from the CHIRP data. Two depocenters are identified and validate combining age-dated coring with high-resolution seismic profiling to identify areas

Gillnet selectivity in the Ebro Delta coastal lagoons and its implication for the fishery management of the sand smelt, Atherina boyeri (Actinopterygii: Atherinidae)

NASA Astrophysics Data System (ADS)

Rodríguez-Climent, Sílvia; Alcaraz, Carles; Caiola, Nuno; Ibáñez, Carles; Nebra, Alfonso; Muñoz-Camarillo, Gloria; Casals, Frederic; Vinyoles, Dolors; de Sostoa, Adolfo

2012-12-01

Multimesh nylon gillnets were set in three Ebro Delta (North-East of Spain) lagoons to determine mesh selectivity for the inhabiting fish community. Each gillnet consisted on a series of twelve panels of different mesh size (ranging from 5.0 to 55.0 mm bar length) randomly distributed. The SELECT method (Share Each Length's Catch Total) was used to estimate retention curves through five models: normal location, normal scale, gamma, lognormal and inverse Gaussian. Each model was fitted twice, under the assumptions of equal and proportional to mesh size fishing effort, but no differences were found between approaches. A possible situation of overfishing in the lagoons, where artisanal fisheries are carried out with a low surveillance effort, was assessed using a vulnerable species inhabiting these brackish waters as case study: the sand smelt, Atherina boyeri. The minimum size for its fishery has not been established, thus remaining under an uncontrolled exploitation situation. Therefore, a Minimum Landing Size (MLS) is proposed based on sexual maturity data. The importance of establishing an adequate MLS and regulate mesh sizes in order to respect natural maturation length is discussed, as well as, the proposal of other measures to improve A. boyeri fishery management.

Major and trace element distribution in soil and sediments from the Egyptian central Nile Valley

NASA Astrophysics Data System (ADS)

Badawy, W. M.; Ghanim, E. H.; Duliu, O. G.; El Samman, H.; Frontasyeva, M. V.

2017-07-01

The distributions of 32 major and trace elements in 72 surface soil and sediment samples collected from the Asyut to Cairo Nile river section were determined by epithermal neutron activation analysis and compared with corresponding data for the Upper Continental Crust, North American Shale Composite, Average Soil and Average Sediment as well as suspended sediments from Congo and Upper Niger Rivers, in order to establish to which extent the Nile sedimentary material can be related to similar material all over the world as well as to local geology. Their relative distributions indicate the presence of detrital material of igneous origin, most probably resulting from weathering of the Ethiopian Highlands and transported by the Blue Nile, the Nile main tributary. The distributions of nickel, zinc, and arsenic contents suggest that the lower part of the Nile and its surroundings including the Nile Delta is not seriously polluted with heavy metals, so that, in spite of a human activity, which lasted four millennia, the Nile River continues to be less affected by any anthropogenic contamination.

STS-57 Earth observation of the Eastern Mediterranean, Nile River, Asia Minor

NASA Image and Video Library

1993-07-01

STS057-73-075 (21 June-1 July 1993) --- Eastern Mediterranean from an unusually high vantage point over the Nile River, this north-looking view shows not only the eastern Mediterranean but also the entire landmass of Asia Minor, with the Black Sea dimly visible at the horizon. Many of the Greek islands can be seen in the Aegean Sea (top left), off the coast of Asia Minor. Cyprus is visible under atmospheric dust in the northeast corner of the Mediterranean. The dust cloud covers the east end of the Mediterranean, its western edge demarcated by a line that cuts the center of the Nile Delta. This dust cloud originated far to the west, in Algeria, and moved northeast over Sicily, southern Italy, and Greece. Part of the cloud then moved on over the Black Sea, but another part swerved southward back towards Egypt. A gyre of clouds in the southeast corner of the Mediterranean indicates a complementary counterclockwise (cyclonic) circulation of air. The Euphrates River appears as a thin green line (upper right) in the yellow Syrian Desert just south of the blue-green mountains of Turkey. The Dead Sea (lower right) lies in a rift valley which extends north into Turkey and south thousands of miles down the Gulf of Aqaba, the Red Sea, and on through East Africa. The straight international boundary between Israel and Egypt (where the coastline angles) is particularly clear in this view, marked by the thicker vegetation on the Israeli side of the border. The green delta of the Nile River appears in the foreground, with the great conurbation of Cairo seen as a gray area at the apex of the triangle. Most of Egypt's 52 million inhabitants live in the delta. On the east side of the delta, the Suez Canal is visible. On the western corner of the delta lies the ancient city of Alexandria, beside the orange and white salt pans. The World War II battlesite El Alamein lies on the coast.

The burden of trachoma in the rural Nile Delta of Egypt: a survey of Menofiya governorate.

PubMed

Ezz al Arab, G; Tawfik, N; El Gendy, R; Anwar, W; Courtright, P

2001-12-01

Evidence of widespread distribution of trachoma in Egypt had not been clarified as previous surveys were limited to individual communities which may not have been representative of the general population. The Nile Delta of Egypt presents a unique environment for trachoma to persist. Economic improvements in the past decade have affected even the poorest rural environments; availability of electricity is now found in many rural communities. Availability of water in Nile Delta has always been good but poor hygienic conditions have been the primary factor in trachoma transmission. A survey of trachoma was undertaken in Menofiya governorate to determine if Egypt should be identified as trachoma endemic and targeted for trachoma control efforts. A multistage random cluster study design was used with the target population defined as adults aged 50 and over and children aged 2-6 years from throughout the governorate. Among preschool children only trachoma was graded while among adults presenting visual acuity and cause of vision loss or blindness were also recorded. Adults were interviewed regarding past trichiasis surgery; those currently with trichiasis or a history of trichiasis surgery were also interviewed regarding outcome of surgery. A total of 3272 children aged 2-6 and 3322 adults age 50+ were enumerated. Among the children 81.3% were examined and among the adults 73.0% were examined. Active trachoma (follicles (TF) and/or intense inflammation (TI)) was found among 36.5% (95% confidence interval (CI) 34.7-38.3%) of the children. TI was 1.89 (95% CI 1.22-2.94) times more common in rural children compared to urban children. The prevalence of trichiasis (TT) in adults was 6.5%; women had an age adjusted odds of trichiasis of 1.68 (95% CI 1.18-2.39) compared to men. Trichiasis was 2.11 times (95% CI 1.33-3.37) more common in rural Menofiya compared to urban Menofiya. TT accounts for blindness (presenting vision <3/60) in 8% of patients and accounts for 13.2% of

First account on the sedimentological, geochemical and petrophysical record of the Messinian Salinity Crisis in the subsurface of onshore Nile Delta, Egypt.

NASA Astrophysics Data System (ADS)

Leila, Mahmoud; Moscariello, Andrea

2016-04-01

The giant Cenozoic Nile Delta system in the extreme northern part of Egypt occupies the southeastern part of the Eastern Mediterranean Basin and represents the most prolific gas province in Egypt with estimates more than 62 tcf of proven reserves (Niazi and Dahi, 2004). Despite the importance of the Messinian sediments in the Nile Delta hosting excellent petroleum reservoirs and seals (Dolson et al., 2001), they are still poorly studied. A multidisciplinary sedimentological, geochemical and petrophysical study is being carried out to unravel the depositional environment and tectonic setting before, during and after the important Messinian Salinity Crisis (MSC) period in the Eastern Mediterranean, and how this affected the eastern part of the onshore Nile Delta. The Lower Messinian Qawasim Formation consists of high to low-density turbiditic sandstones displaying several vertical stacked patterns of coarsening and fining upwards trends reflecting different pulses of sedimentation suggesting a sedimentation in a submarine fan developed at the base of shelf slope. The deeply incised valley infill, dating the Upper Messinian consists of the Abu Madi Formation made of lowstand braided and meandering fluvial sandstone interbedded with fine-grained floodplain sandstones and siltstones. The base of this unit is erosional and contains large mud clasts embedded in a fine-grained matrix. The Upper Miocene lowstand fluvial sandstones are capped by estuarine fine-grained cross laminated sandstones, siltstones/mudstones followed by an open marine mudstones of the Early Pliocene Kafr El-Sheikh Formation representing the end of the MSC and the subsequent transgression episode after the re-establishment of the connection between the Mediterranean and the Atlantic Ocean. Both the Qawasim and Abu Madi Formations display similar geochemical fingerprints from the clastic components. Recycled Cretaceous and Eocene sedimentary and granodioritic to intermediate igneous rocks located in

Fish fauna recovery in a newly re-flooded Mediterranean coastal lagoon

NASA Astrophysics Data System (ADS)

Koutrakis, Emmanuil; Sylaios, Georgios; Kamidis, Nikolaos; Markou, Dimitrios; Sapounidis, Argyris

2009-08-01

Drana Lagoon, located at the NW site of Evros River Delta, was drained in 1987 and re-flooded in 2004 within the framework of an integrated wetland restoration project. This study presents the results of a monitoring program of the lagoon's oceanographic, water quality and fish fauna characteristics, during the pre- and post-restoration period. Results depict the presence of high salinity water (up to 41) due to seawater intrusion, strong evaporation in its interior and inadequate freshwater inflows. Overall, nutrient levels were low depicting local changes. Tidal variability at the mouth was approximately 0.2 m, producing high velocity tidal currents (up to 0.75 m/s). Eleven fish fauna species were collected; seven species were caught in both the inlet channel and the lagoon during the pre-restoration period and nine species in the post-restoration period. Atherina boyeri (37.6%) and Pomatoschistus marmoratus (31.7%) dominated the lagoon during the post-restoration period. Most of the A. boyeri specimens (88.5%) were caught inside the lagoon, while P. marmoratus had an almost equal distribution in the inlet channel and the lagoon (56.3% and 43.7% respectively). The presence of species of the Mugilidae family (5.2% total average catches after lagoon re-flooding) was mainly in the inlet channel (12.6% of the average catches) and not inside the lagoon (only 1.3% of the average catches). The small number of fish species inhabiting the lagoon might be the result of the recent restoration or it could be related with the increased water flow observed at the lagoon mouth during the flood and ebb tidal phases, and also in the presence of a smooth bank in the concrete waterspout that connects the entrance channel with the lagoon. The limited presence of the Mugilidae juveniles inside the lagoon could be related to the prevailing tidal inlet dynamics (i.e. strong ebb flow at lagoon inlet), thus preventing the species to enter the lagoon. In order to restore the lagoon

Evapotranspiration in the Nile Basin: Identifying dynamics and drivers, 2002–2011

USGS Publications Warehouse

Alemu, Henok; Kaptue, Armel T.; Senay, Gabriel; Wimberly, Michael C.; Henebry, Geoffrey M.

2015-01-01

Analysis of the relationship between evapotranspiration (ET) and its natural and anthropogenic drivers is critical in water-limited basins such as the Nile. The spatiotemporal relationships of ET with rainfall and vegetation dynamics in the Nile Basin during 2002–2011 were analyzed using satellite-derived data. Non-parametric statistics were used to quantify ET-rainfall interactions and trends across land cover types and subbasins. We found that 65% of the study area (2.5 million km2) showed significant (p < 0.05) positive correlations between monthly ET and rainfall, whereas 7% showed significant negative correlations. As expected, positive ET-rainfall correlations were observed over natural vegetation, mixed croplands/natural vegetation, and croplands, with a few subbasin-specific exceptions. In particular, irrigated croplands, wetlands and some forests exhibited negative correlations. Trend tests revealed spatial clusters of statistically significant trends in ET (6% of study area was negative; 12% positive), vegetation greenness (24% negative; 12% positive) and rainfall (11% negative; 1% positive) during 2002–2011. The Nile Delta, Ethiopian highlands and central Uganda regions showed decline in ET while central parts of Sudan, South Sudan, southwestern Ethiopia and northeastern Uganda showed increases. Except for a decline in ET in central Uganda, the detected changes in ET (both positive and negative) were not associated with corresponding changes in rainfall. Detected declines in ET in the Nile delta and Ethiopian highlands were found to be attributable to anthropogenic land degradation, while the ET decline in central Uganda is likely caused by rainfall reduction.

Integrated seismic tools to delineate Pliocene gas-charged geobody, offshore west Nile delta, Egypt

NASA Astrophysics Data System (ADS)

Othman, Adel A. A.; Bakr, Ali; Maher, Ali

2017-06-01

Nile delta province is rapidly emerging as a major gas province; commercial gas accumulations have been proved in shallow Pliocene channels of El-Wastani Formation. Solar gas discovery is one of the Turbidities Slope channels within the shallow Pliocene level that was proved by Solar-1 well. The main challenge of seismic reservoir characterization is to discriminate between Gas sand, Water sand and Shale, and extracting the gas-charged geobody from the seismic data. A detailed study for channel connectivity and lithological discrimination was established to delineate the gas charged geobody. Seismic data, being non-stationary in nature, have varying frequency content in time. Spectral decomposition of a seismic signal aims to characterize the time-dependent frequency response of subsurface rocks and reservoirs for imaging and mapping of bed thickness and geologic discontinuities. Spectral decomposition unravels the seismic signal into its constituent frequencies. A crossplot between P-wave Impedance (Ip) and S-wave Impedance (Is) derived from well logs (P-wave velocity, S-wave velocity and density) can be used to discriminate between gas-bearing sand, water-bearing sand, and shale. From Ip vs. Is crossplot, clear separation occurs in the P-impedance so post stack inversion is enough to be applied. Integration between Inversion results and Ip vs. Is crossplot cutoffs help to generate 3D lithofacies cubes, which is used to extract facies geobodies.

Interdisciplinary assessment of sea-level rise and climate change impacts on the lower Nile delta, Egypt.

PubMed

Sušnik, Janez; Vamvakeridou-Lyroudia, Lydia S; Baumert, Niklas; Kloos, Julia; Renaud, Fabrice G; La Jeunesse, Isabelle; Mabrouk, Badr; Savić, Dragan A; Kapelan, Zoran; Ludwig, Ralf; Fischer, Georg; Roson, Roberto; Zografos, Christos

2015-01-15

CLImate-induced changes on WAter and SECurity (CLIWASEC) was a cluster of three complementary EC-FP7 projects assessing climate-change impacts throughout the Mediterranean on: hydrological cycles (CLIMB - CLimate-Induced changes on the hydrology of Mediterranean Basins); water security (WASSERMed - Water Availability and Security in Southern EuRope and the Mediterranean) and human security connected with possible hydro-climatic conflicts (CLICO - CLImate change hydro-COnflicts and human security). The Nile delta case study was common between the projects. CLIWASEC created an integrated forum for modelling and monitoring to understand potential impacts across sectors. This paper summarises key results from an integrated assessment of potential challenges to water-related security issues, focusing on expected sea-level rise impacts by the middle of the century. We use this common focus to illustrate the added value of project clustering. CLIWASEC pursued multidisciplinary research by adopting a single research objective: sea-level rise related water security threats, resulting in a more holistic view of problems and potential solutions. In fragmenting research, policy-makers can fail to understand how multiple issues can materialize from one driver. By combining efforts, an integrated assessment of water security threats in the lower Nile is formulated, offering policy-makers a clearer picture of inter-related issues to society and environment. The main issues identified by each project (land subsidence, saline intrusion - CLIMB; water supply overexploitation, land loss - WASSERMed; employment and housing security - CLICO), are in fact related. Water overexploitation is exacerbating land subsidence and saline intrusion, impacting on employment and placing additional pressure on remaining agricultural land and the underdeveloped housing market. All these have wider implications for regional development. This richer understanding could be critical in making better

Spatial analysis of lymphatic filariasis distribution in the Nile Delta in relation to some environmental variables using geographic information system technology.

PubMed

Hassan, A N; Dister, S; Beck, L

1998-04-01

Geographic information system (GIS) was used to analyze the spatial distribution of filariasis in the Nile Delta. The study involved 201 villages belonging to Giza, Qalubiya, Monoufiya, Gharbiya, and Dakahliya governorates. Villages with similar microfilarial (mf) prevalence rates were observed to cluster within 1-2 km distance, then, clustering started to decrease significantly with distance up to 5 km (Pearson correlation coefficient = -0.98). the likelihood of negative and high prevalence villages being contiguous was very low (approximately 1.8%, n = 612 village-pairs) indicating homogeneity in disease processes within the defined spatial scales. Of the villages located within 2 km from the main Nile branches (n = 46), 95% exhibited low prevalence. In addition, the spatial pattern of mf prevalence was shown to be negatively associated with annual rainfall and relative humidity, while it was positively associated with annual daily temperature. Average mf prevalence in warmer, relatively drier areas receiving 25 mm of rain was significantly higher (3.9%) than that in less warmer but more humid areas receiving 50 mm of rain (1.6%) (P < 0.0001). Based on the results of the present study, GIS was used to generate a "filariasis risk map" that could be used by health authorities to efficiently direct surveillance and control efforts. This investigation identified some of the factors underlying filariasis spatial pattern, quantified clustering and demonstrated the potential of GIS application in vector-borne disease epidemiology.

City Lights Illuminate the Nile

NASA Image and Video Library

2017-12-08

NASA image acquired October 13, 2012 The Nile River Valley and Delta comprise less than 5 percent of Egypt’s land area, but provide a home to roughly 97 percent of the country’s population. Nothing makes the location of human population clearer than the lights illuminating the valley and delta at night. On October 13, 2012, the Visible Infrared Imaging Radiometer Suite (VIIRS) on the Suomi NPP satellite captured this nighttime view of the Nile River Valley and Delta. This image is from the VIIRS “day-night band,” which detects light in a range of wavelengths from green to near-infrared and uses filtering techniques to observe signals such as gas flares, auroras, wildfires, city lights, and reflected moonlight. The city lights resemble a giant calla lily, just one with a kink in its stem near the city of Luxor. Some of the brightest lights occur around Cairo, but lights are abundant along the length of the river. Bright city lights also occur along the Suez Canal and around Tel Aviv. Away from the lights, however, land and water appear uniformly black. This image was acquired near the time of the new Moon, and little moonlight was available to brighten land and water surfaces. NASA Earth Observatory image by Jesse Allen and Robert Simmon, using VIIRS Day-Night Band data from the Suomi National Polar-orbiting Partnership. Suomi NPP is the result of a partnership between NASA, the National Oceanic and Atmospheric Administration, and the Department of Defense. Caption by Michon Scott. Instrument: Suomi NPP - VIIRS Credit: NASA Earth Observatory Click here to view all of the Earth at Night 2012 images Click here to read more about this image NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency�

"3D Depositional Model in a Complex Incised Valley Fill: An example from the late Messinian Abu Madi Formation, Nile Delta Basin, Egypt"

NASA Astrophysics Data System (ADS)

Nasr El-Deen Badawy, A. M. E. S.; Abu El-Ata, A. S. A.

2016-12-01

The study area lies in the Central Marine Delta, which is located in the Baltim offshore concession, about 25 kms from the shoreline and 40 kms North Abu Madi-El Qara fields. The current study is aiming to give a comprehensive combined and conjugated study between well data and seismic survey interpretations. The former includes well logging data, acquired results of actual drilling and biostratigraphic study, to give an integrated picture for the considered area in a true attempt to visualize the geological and geophysical data given from both wells and seismic reflection surveys, and hence introduce an updated sequence stratigraphic framework for the Messinian sequence at the offshore Nile Delta area. The 3D geological model, based on all the available well data (faunal contents, litho-facies, log signatures…...etc.) and the seismic expressions (facies and geometry), has been constructed for the study area. This model shows that, the study area was changed from shelf (considered as erosional), to delta channels and then directed to the north. It changed to delta front mouth bars on the shoreface and affected by the main Rosetta fault to collect deposits as sand bars in the southern part on the downthrown side of the fault. Most deposits on this face were highstand system tracts. This deduced from the sequence stratigraphy study. The area was then sloped to the north, as shelf slope with the deposition of slumps, which was formed during erosions and mass flows. Some mud diapers also formed upon this slope. After dropping the sea level with the activity of some syn-sedimentary faults, some channels with sediment supply started their activities to dig their ways to the north.

3D Depositional Model in a Complex Incised Valley Fill: An Example from the Late Messinian Abu Madi Formation, Nile Delta Basin, Egypt

NASA Astrophysics Data System (ADS)

Nasr El-Deen Badawy, A. M. E. S.

2015-12-01

The study area lies in the Central Marine Delta, which is located in the Baltim offshore concession, about 25 kms from the shoreline and 40 kms North Abu Madi-El Qara fields. The current study is aiming to give a comprehensive combined and conjugated study between well data and seismic survey interpretations. The former includes well logging data, acquired results of actual drilling and biostratigraphic study, to give an integrated picture for the considered area in a true attempt to visualize the geological and geophysical data given from both wells and seismic reflection surveys, and hence introduce an updated sequence stratigraphic framework for the Messinian sequence at the offshore Nile Delta area. The 3D geological model, based on all the available well data (faunal contents, litho-facies, log signatures…...etc.) and the seismic expressions (facies and geometry), has been constructed for the study area. This model shows that, the study area was changed from shelf (considered as erosional), to delta channels and then directed to the north. It changed to delta front mouth bars on the shoreface and affected by the main Rosetta fault to collect deposits as sand bars in the southern part on the downthrown side of the fault. Most deposits on this face were highstand system tracts. This deduced from the sequence stratigraphy study. The area was then sloped to the north, as shelf slope with the deposition of slumps, which was formed during erosions and mass flows. Some mud diapers also formed upon this slope. After dropping the sea level with the activity of some syn-sedimentary faults, some channels with sediment supply started their activities to dig their ways to the north.

3D Depositional Model in a Complex Incised Valley Fill: An Example from the Late Messinian Abu Madi Formation, Nile Delta Basin, Egypt

NASA Astrophysics Data System (ADS)

Nasr El-Deen Badawy, A. M. E. S.

2016-02-01

The study area lies in the Central Marine Delta, which is located in the Baltim offshore concession, about 25 kms from the shoreline and 40 kms North Abu Madi-El Qara fields. The current study is aiming to give a comprehensive combined and conjugated study between well data and seismic survey interpretations. The former includes well logging data, acquired results of actual drilling and biostratigraphic study, to give an integrated picture for the considered area in a true attempt to visualize the geological and geophysical data given from both wells and seismic reflection surveys, and hence introduce an updated sequence stratigraphic framework for the Messinian sequence at the offshore Nile Delta area. The 3D geological model, based on all the available well data (faunal contents, litho-facies, log signatures…...etc.) and the seismic expressions (facies and geometry), has been constructed for the study area. This model shows that, the study area was changed from shelf (considered as erosional), to delta channels and then directed to the north. It changed to delta front mouth bars on the shoreface and affected by the main Rosetta fault to collect deposits as sand bars in the southern part on the downthrown side of the fault. Most deposits on this face were highstand system tracts. This deduced from the sequence stratigraphy study. The area was then sloped to the north, as shelf slope with the deposition of slumps, which was formed during erosions and mass flows. Some mud diapers also formed upon this slope. After dropping the sea level with the activity of some syn-sedimentary faults, some channels with sediment supply started their activities to dig their ways to the north.

Changes in Terrestrial Organic Carbon Delivery to the Colville River Delta and Adjacent Simpson's Lagoon Over the Late Holocene

NASA Astrophysics Data System (ADS)

Schreiner, K. M.; Bianchi, T. S.; Allison, M. A.; Miller, A. J.; Marcantonio, F.

2012-04-01

The Colville River in Alaska is the largest river in North America that drains only continuously permafrosted tundra, and as such provides a unique signal of historical changes in one of the world's most vulnerable areas to climate changes. Additionally, the Colville flows into Simpson's Lagoon, a shallow area of the Alaskan Beaufort coast protected by a barrier island chain, lessening the impacts of Arctic storms and ice grounding on sediment mixing. Cores collected from the Colville river delta in August of 2010 were found to be composed of muddy, organic-rich, well-laminated sediments. The 2.5 to 3 meter length of each core spans about one to two thousand years of Holocene history, including the entire Anthropocene and much of the late Holocene. Three cores were sampled for this data set, arranged latitudinally from the mouth of the Colville River east into Simpson's Lagoon. Samples were taken every 2 cm for the entire length of all cores. Bulk analyses including percent organic carbon, percent nitrogen, and stable carbon isotopic analysis were performed, and compound specific analyses including lignin-phenol and algal pigment analyses were performed. These analyses showed significant changes in carbon storage over the past one to two thousand years. There were also significant spatial differences in organic carbon inputs across the ~20km distance between the Colville mouth and the easternmost core. Lignin-phenol concentrations in surface sediments nearest to the river mouth correlated positively with reconstructed Alaskan North Slope temperatures, suggesting more terrestrial organic matter was delivered during higher temperature regimes. Molar C:N ratios and plant pigments correlated negatively and positively, respectively, with reconstructed Alaskan North Slope moisture regime, indicating greater algal inputs during wetter time periods. These data may in part be consistent with observed woody shrub encroachment and increasing expanse of permafrost lakes on the

Interaction of surface water and groundwater in the Nile River basin: isotopic and piezometric evidence

NASA Astrophysics Data System (ADS)

Kebede, Seifu; Abdalla, Osman; Sefelnasr, Ahmed; Tindimugaya, Callist; Mustafa, Osman

2017-05-01

Past discussions around water-resources management and development in the River Nile basin disregard groundwater resources from the equation. There is an increasing interest around factoring the groundwater resources as an integral part of the Nile Basin water resources. This is hampered by knowledge gap regarding the groundwater resources dynamics (recharge, storage, flow, quality, surface-water/groundwater interaction) at basin scale. This report provides a comprehensive analysis of the state of surface-water/groundwater interaction from the headwater to the Nile Delta region. Piezometric and isotopic (δ18O, δ2H) evidence reveal that the Nile changes from a gaining stream in the headwater regions to mostly a loosing stream in the arid lowlands of Sudan and Egypt. Specific zones of Nile water leakage to the adjacent aquifers is mapped using the two sources of evidence. Up to 50% of the surface-water flow in the equatorial region of the Nile comes from groundwater as base flow. The evidence also shows that the natural direction and rate of surface-water/groundwater interaction is largely perturbed by human activities (diversion, dam construction) particularly downstream of the Aswan High Dam in Egypt. The decrease in discharge of the Nile River along its course is attributed to leakage to the aquifers as well as to evaporative water loss from the river channel. The surface-water/groundwater interaction occurring along the Nile River and its sensitivity to infrastructure development calls for management strategies that account groundwater as an integral part of the Nile Basin resources.

Geochemical constraints on the provenance and depositional environment of the Messinian sediments, onshore Nile Delta, Egypt: Implications for the late Miocene paleogeography of the Mediterranean

NASA Astrophysics Data System (ADS)

Leila, Mahmoud; Moscariello, Andrea; Šegvić, Branimir

2018-07-01

The Messinian sequence rocks in the Nile Delta present prolific hydrocarbon reservoirs and are, therefore, of great importance from the aspect of petroleum exploration and development strategies. Yet, little is known about their tectonic provenance and depositional setting. This study focuses on the geochemical signatures archived in the Messinian siliciclastic sediments to employ them as a powerful tool to elucidate the basin evolution during the Messinian salinity crisis (MSC). The pre-MSC Qawasim sediments are texturally and compositionally immature. They are enriched in lithic fragments, foraminiferal bioclasts, and rounded heavy minerals suggesting a significant contribution from the pre-existing Cretaceous-Eocene mixed carbonate-siliciclastic rocks bordering the Nile Delta. In contrast, the textural and mineralogical compositions as well as a range of geochemical proxies (e.g., chemical index of alteration and weathering CIA, CIW as well as index of chemical variability ICV and Zr/Sc ratio) are in favor of prolonged weathering and at least second-cycle origin of the MSC Abu Madi sediments. The mutually correspondent elemental ratios (e.g., Al2O3/TiO2, K2O/Na2O, Zr/Hf, Rb/Sr, Cr/Zr, and Cr/Th) and uniform weathering trends are indicatives for a similar provenance of the pre-MSC Qawasim and MSC Abu Madi sediments. Rare earth element (REE) distribution reveals a significant enrichment in LREE, depletion in HREE, relatively high (La/Yb)N (mean > 9), low (Gd/Yb)N (mean < 2) and a pronounced negative Eu anomaly (mean∼0.75) in the studied Messinian facies, characteristics of upper continental sources of mainly felsic to intermediate rock affiliations. Provenance proxy ratios (e.g., Al/Ti, La/Sc, Th/Sc, La/Co and Eu/Eu*) along with the low concentration of transition trace elements (Cr, Ni, Co, Ni) are effectively ruling out the contribution from mafic and ultramafic rocks. The investigated Messinian sedimentary facies have similar passive margin geotectonic

From source to sink: Exploring the Quaternary history of the Nile

NASA Astrophysics Data System (ADS)

Woodward, J. C.; Williams, M. A. J.; Garzanti, E.; Macklin, M. G.; Marriner, N.

2015-12-01

Nearly two thousand five hundred years have elapsed since the Greek historian Herodotus (ca. 485-425 BC) posed a number of fundamental questions about the source, age, and flood regime of the River Nile. Herodotus travelled widely in Egypt in around 450 BC - mainly in the Delta and Lower Egypt, but he may have journeyed as far upstream as Aswan and the First Cataract. A keen observer of nature, with a questioning intellect, Herodotus very quickly discerned that the dark alluvial soils of Egypt were very different from the desert soils of Syria and Libya, and inferred that they were derived from the Ethiopian headwaters of the Nile. Herodotus was the first to recognize that Egyptian civilization was, as he put it, ;the gift of the river; (Griffiths, 1966) since he understood that, without the regular and reliable hundred days of flooding during the summer months, and the annual deposition of silts along the floodplains, agriculture would not have been possible on any significant scale under the desert climate of the Nile Valley.

Anatomy of the Holocene succession of the southern Venice lagoon revealed by very high-resolution seismic data

NASA Astrophysics Data System (ADS)

Zecchin, Massimo; Brancolini, Giuliano; Tosi, Luigi; Rizzetto, Federica; Caffau, Mauro; Baradello, Luca

2009-05-01

The southern portion of the Venice lagoon contains a relatively thick (up to 20 m) Holocene sedimentary body that represents a detailed record of the formation and evolution of the lagoon. New very high-resolution (VHR) seismic profiles provided a detailed investigation on depositional geometries, internal bounding surfaces and stratal relationships. These informations, combined with core analysis, allowed the identification of large- to medium-scale sedimentary structures (e.g. dunes, point bars), the corresponding sedimentary environment, and of retrogradational and progradational trends. In addition, the availability of dense seismic network produced a 3D reconstruction of the southern lagoon and the recognition of the along-strike and dip variability of the stratal architecture. Three main seismic units (H1-H3), separated by key stratal surfaces (S1-S3), form the Holocene succession in the southern Venice lagoon. This succession is bounded at the base by the Pleistocene/Holocene boundary (the surface S1), which consists of a surface of subaerial exposure locally subjected to river incision. The lower part of the Holocene succession (up to 13 m thick) consists of incised valley fills passing upward into lagoon and then shallow-marine sediments (Unit H1), and therefore shows a deepening-upward trend and a retrogradational stacking pattern. A prograding delta and adjacent shorelines, showing internal clinoforms downlapping onto the top of Unit H1 (the surface S2), form the middle part of the Holocene succession (Unit H2, up to 7.5 m thick). Unit H2 is interpreted as a result of a regressive phase started about 6 kyr BP and continued until recent time. The upper part of the Holocene succession (Unit H3) consists of lagoonal deposits, including tidal channel and tidal and subtidal flat sediments, that abruptly overlie Unit H2. Unit H3 is thought to represent a drowning of the area primarily due to human interventions that created rivers diversion and consequent

Remote sensing, planform, and facies analysis of the Plain of Tineh, Egypt for the remains of the defunct Pelusiac River

NASA Astrophysics Data System (ADS)

Quintanar, Jessica; Khan, Shuhab D.; Fathy, Mohamed S.; Zalat, Abdel-Fattah A.

2013-11-01

The Pelusiac Branch was a distributary river in the Nile Delta that splits off from the main trunk of the Nile River as it flowed toward the Mediterranean. At approximately 25 A.D., it was chocked by sand and silt deposits from prograding beach accretion processes. The lower course of the river and its bifurcation point from the trunk of the Nile have been hypothesized based on ancient texts and maps, as well as previous research, but results have been inconsistent. Previous studies partly mapped the lower course of the Pelusiac River in the Plain of Tineh, east of the Suez Canal, but rapid urbanization related to the inauguration of the Peace Canal mega-irrigation project has covered any trace of the linear feature reported by these previous studies. The present study used multispectral remote sensing data of GeoEYE-1 and Landsat-TM to locate and accurately map the course of the defunct Pelusiac River within the Plain of Tineh. Remote sensing analysis identified a linear feature that is 135 m wide at its maximum and approximately 13 km long. It extends from the Pelusium ruins to the Suez Canal, just north of the Peace Canal. This remotely located linear feature corresponds to the path of the Pelusiac River during Roman times. Planform geomorphology was applied to determine the hydrological regime and paleodischarge of the river prior to becoming defunct. Planform analysis derived a bankfull paleodischarge value of ~ 5700 m3 s- 1 and an average discharge of 650 m3 s- 1, using the reach average for the interpreted Pelusiac River. The derived values show a river distributary similar in discharge to the modern dammed Damietta river. Field work completed in April of 2012 derived four sedimentary lithofacies of the upper formation on the plain that included pro-delta, delta-front and delta-plain depositional environments. Diatom and fossil mollusk samples were also identified that support coastal beach and lagoonal environments of deposition. Measured section columns

Prediction of villages at risk for filariasis transmission in the Nile Delta using remote sensing and geographic information system technologies.

PubMed

Hassan, A N; Beck, L R; Dister, S

1998-04-01

Remote sensing and geographic information system (GIS) technologies were used to discriminate between 130 villages, in the Nile Delta, at high and low risk for filariasis, as defined by microfilarial prevalence. Landsat Thematic Mapper (TM) data were digitally processed to generate a map of landcover as well as spectral indices such as NDVI and moisture index. A Tasseled Cap transformation was also carried out on the TM data which produced three more indices: brightness, greenness and wetness. GIS functions were used to extract information on landcover and spectral indices within one km buffers around the study villages. The relationship between satellite data and prevalence was investigated using discriminant analysis. The analysis indicated that the most important landscape elements associated with prevalence were water and marginal vegetation, while wetness and moisture index were the most important indices. Discriminant functions generated for these variables were able to correctly predict 80% and 74% of high and low prevalence villages, respectively, with an overall accuracy of 77%. The present approach provides a promising tool for regional filariasis surveillance and helps direct control efforts.

Spatial variation of acid-volatile sulfide and simultaneously extracted metals in Egyptian Mediterranean Sea lagoon sediments.

PubMed

Younis, Alaa M; El-Zokm, Gehan M; Okbah, Mohamed A

2014-06-01

In risk assessment of aquatic sediments, the immobilizing effect of acid-volatile sulfide (AVS) on trace metals is a principal control on availability and associated toxicity of metals to aquatic biota, which reduces metal bioavailability and toxicity by binding and immobilizing metals as insoluble sulfides. Spatial variation pattern of AVS, simultaneously extracted metals (SEM), and sediment characteristics were studied for the first time in surface sediment samples (0-20 cm) from 43 locations in Egyptian northern delta lagoons (Manzalah, Burullus, and Maryut) as predictors of the bioavailability of some divalent metals (Cu, Zn, Cd, Pb, and Ni) in sediments as well as indicators of metal toxicity in anaerobic sediments. The results indicated that the ∑SEM (Cu + Zn + Cd + Pb + Ni) values in sediments of lagoon Burullus had higher concentrations than those of Maryut and Manzalah. In contrast, AVS concentrations were considerably higher in lagoons Manzalah and Maryut and seemed to be consistent with the increase in organic matter than lagoon Burullus. Generally, the average concentrations of the SEM in all lagoons were in the order of Zn > Cu > Ni > Pb > Cd. The ratios of ∑SEM/AVS were less than 1 at all the sampling stations except at one station in lagoon Maryut as well as four stations located in lagoon Burullus (∑SEM/AVS > 1), which suggests that the metals have toxicity potential in these sediments. Therefore, SEM concentrations probably are better indicators of the metal bioavailability in sediments than the conventional total metal concentrations.

Surface water-groundwater exchange in transitional coastal environments by airborne electromagnetics: The Venice Lagoon example

NASA Astrophysics Data System (ADS)

Viezzoli, A.; Tosi, L.; Teatini, P.; Silvestri, S.

2010-01-01

A comprehensive investigation of the mixing between salt/fresh surficial water and groundwater in transitional environments is an issue of paramount importance considering the ecological, cultural, and socio-economic relevance of coastal zones. Acquiring information, which can improve the process understanding, is often logistically challenging, and generally expensive and slow in these areas. Here we investigate the capability of airborne electromagnetics (AEM) at the margin of the Venice Lagoon, Italy. The quasi-3D interpretation of the AEM outcome by the spatially constrained inversion (SCI) methodology allows us to accurately distinguish several hydrogeological features down to a depth of about 200 m. For example, the extent of the saltwater intrusion in coastal aquifers and the transition between the upper salt saturated and the underlying fresher sediments below the lagoon bottom are detected. The research highlights the AEM capability to improve the hydrogeological characterization of subsurface processes in worldwide lagoons, wetlands, deltas.

A new model of river dynamics, hydroclimatic change and human settlement in the Nile Valley derived from meta-analysis of the Holocene fluvial archive

NASA Astrophysics Data System (ADS)

Macklin, Mark G.; Toonen, Willem H. J.; Woodward, Jamie C.; Williams, Martin A. J.; Flaux, Clément; Marriner, Nick; Nicoll, Kathleen; Verstraeten, Gert; Spencer, Neal; Welsby, Derek

2015-12-01

In the Nile catchment, a growing number of site- and reach-based studies employ radiocarbon and, more recently, OSL dating to reconstruct Holocene river histories, but there has been no attempt to critically evaluate and synthesise these data at the catchment scale. We present the first meta-analysis of published and publically available radiocarbon and OSL dated Holocene fluvial units in the Nile catchment, including the delta region, and relate this to changing climate and river dynamics. Dated fluvial units are separated both geographically (into the Nile Delta and White, Blue, and Desert Nile sub-regions) and into depositional environment (floodplain and palaeochannel fills). Cumulative probability density frequency (CPDF) plots of floodplain and palaeochannel units show a striking inverse relationship during the Holocene, reflecting abrupt (<100 years) climate-related changes in flooding regime. The CPDF plot of dated floodplain units is interpreted as a record of over-bank river flows, whilst the CPDF plot of palaeochannel units reflect periods of major flooding associated with channel abandonment and contraction, as well as transitions to multi-centennial length episodes of greater aridity and low river flow. This analysis has identified major changes in river flow and dynamics in the Nile catchment with phases of channel and floodplain contraction at c. 6150-5750, 4400-4150, 3700-3450, 2700-2250, 1350-900, 800-550 cal. BC and cal. AD 1600, timeframes that mark shifts to new hydrological and geomorphological regimes. We discuss the impacts of these changing hydromorphological regimes upon riverine civilizations in the Nile Valley.

Modelling the salinization of a coastal lagoon-aquifer system

NASA Astrophysics Data System (ADS)

Colombani, N.; Mastrocicco, M.

2017-08-01

In this study, a coastal area constituted by alternations of saline-brackish lagoons and freshwater bodies was studied and modelled to understand the hydrological processes occurring between the lagoons, the groundwater system of the Po River Delta (Italy) and the Adriatic Sea. The contribution of both evaporation and anthropogenic factors on groundwater salinization was assessed by means of soil, groundwater and surface water monitoring. Highresolution multi-level samplers were used to capture salinity gradients within the aquifer and surface water bodies. Data were employed to calibrate a density-dependent numerical transport model implemented with SEAWAT code along a transect perpendicular to the coast line. The results show that the lagoon is hydraulically well connected with the aquifer, which provides the major source of salinity because of the upcoming of paleo-seawater from the aquitard laying at the base of the unconfined aquifer. On the contrary, the seawater (diluted by the freshwater river outflow) creates only a limited saltwater wedge. The increase in groundwater salinity could be of serious concern, especially for the pinewood located in the dune near the coast, sensitive to salinity increases. This case study represents an interesting paradigm for other similar environmental setting, where the assumption of classical aquifer salinization from a saltwater wedge intruding from the sea is often not representative of the actual aquifer’s salinization mechanisms.

West Nile virus: Uganda, 1937, to New York City, 1999.

PubMed

Hayes, C G

2001-12-01

West Nile virus, first isolated in 1937, is among the earliest arthropod-borne viruses discovered by humans. Its broad geographical distribution, not uncommon infection of humans, transmission by mosquitoes, and association with wild birds as enzootic hosts were well documented by the mid-1960s. However, West Nile virus was not considered to be a significant human pathogen because most infections appeared to result in asymptomatic or only mild febrile disease. Several epidemics had been documented prior to 1996, some involving hundreds to thousands of cases in mostly rural populations, but only a few cases of severe neurological disease had been reported. The occurrence between 1996 and 1999 of three major epidemics, in southern Romania, the Volga delta in southern Russia, and the northeastern United States, involving hundreds of cases of severe neurological disease and fatal infections was totally unexpected. These were the first epidemics reported in large urban populations. A significant factor that appeared in common to all three outbreaks was the apparent involvement of the common house mosquito, Culex pipiens, as a vector. This species had not previously been implicated as important in the transmission of West Nile virus. In addition the epidemic in the northeastern United States was unusual in the association of West Nile virus infection with fatal disease of birds, suggesting a change in the virulence of the virus toward this host. Understanding the risk factors that contributed to these three urban epidemics is important for minimizing the potential for future occurrences. This review will attempt to compare observations on the biology of West Nile virus made over about 60 years prior to the recent epidemics to observations made in association with these urban epidemics.

Comparative oceanography of coastal lagoons

NASA Technical Reports Server (NTRS)

Kjerfve, Bjorn

1986-01-01

The hypothesis that physical lagoon characteristics and variability depend on the channel connecting the lagoon to the adjacent coastal ocean is evaluated. The geographical, hydrological, and oceanographic characteristics of 10 lagoon systems are described and analyzed; these oceanographic features are utilized to classify the lagoon systems. Choked lagoons (Laguna Joyuda, Coorong, Lake St.Lucia, Gippsland Lakes, Lake Songkla/Thale Luang/Thale Noi, and Lagoa dos Patos) are prevalent on coasts with high wave energy and low tidal range; restricted lagoons (Lake Pontchartrain and Laguna de Terminos) are located on low/medium wave energy coasts with a low tidal range; and leaky lagoons (Mississippi Sound and Belize Lagoon/Chetumal Bay) are connected to the ocean by wide tidal passes that transmit oceanic effects into the lagoon with a minimum of resistance. The data support the hypothesis that the nature of the connecting channel controls system functions.

West Nile virus circulation in South-Eastern Romania, 2011 to 2013.

PubMed

Dinu, S; Cotar, A I; Pănculescu-Gătej, I R; Fălcuţă, E; Prioteasa, F L; Sîrbu, A; Oprişan, G; Bădescu, D; Reiter, P; Ceianu, C S

2015-05-21

Lineage 2 West Nile virus (WNV), previously found only in sub-Saharan Africa and Madagascar, was identified in Hungary in 2004 and has rapidly expanded in Europe in the past decade. Following a significant outbreak of West Nile fever with neurological cases caused by lineage 1 WNV in Romania in 1996, scattered cases have been recorded in the south-east of the country in each transmission season. Another outbreak, affecting a larger area and caused by lineage 2 WNV, was recorded in 2010. We analysed human sera from neuroinvasive West Nile fever cases and mosquitoes, sampled in south-eastern Romania between 2011 and 2013, for the presence of WNV genome, and obtained partial NS5 and envelope glycoprotein sequences. Human- and mosquito-derived WNV sequences were highly similar (99%) to Volgograd 2007 lineage 2 WNV and differed from isolates previously detected in central and southern Europe. WNV was detected in one pool of Culex pipiens s.l. males, documenting vertical transmission. Lineage 4 WNV, of unknown pathogenicity to mammals, was found in the amphibian-feeding mosquito Uranotaenia unguiculata from the Danube Delta. Our results present molecular evidence for the maintenance of the same isolates of Volgograd 2007-like lineage 2 WNV in south-eastern Romania between 2011 and 2013.

Salt geometry influence on present-day stress orientations in the Nile Delta: Insights from numerical modeling

NASA Astrophysics Data System (ADS)

Eckert, Andreas; Zhang, Weicheng

2016-02-01

The offshore Nile Delta displays sharply contrasting orientations of the maximum horizontal stress, SH, in regions above Messinian evaporites (suprasalt) and regions below Messinian evaporites (subsalt). Published stress orientation data predominantly show margin-normal suprasalt SH orientations but a margin-parallel subsalt SH orientation. While these data sets provide the first major evidence that evaporite sequences can act as mechanical detachment horizons, the cause for the stress orientation contrast remains unclear. In this study, 3D finite element analysis is used to investigate the causes for stress re-orientation based on two different hypotheses. The modeling study evaluates the influence of different likely salt geometries and whether stress reorientations are the result of basal drag forces induced by gravitational gliding or whether they represent localized variations due to mechanical property contrasts. The modeling results show that when salt is present as a continuous layer, gravitational gliding occurs and basal drag forces induced in the suprasalt layers result in the margin-normal principal stress becoming the maximum horizontal stress. With the margin-normal stress increase being confined to the suprasalt layers, the salt acts as a mechanical detachment horizon, resulting in different SH orientations in the suprasalt compared to the subsalt layers. When salt is present as isolated bodies localized stress variations occur due to the mechanical property contrasts imposed by the salt, also resulting in different SH orientations in the suprasalt compared to the subsalt layers. The modeling results provide additional quantitative evidence to confirm the role of evaporite sequences as mechanical detachment horizons.

Decadal biogeochemical history of the south east Levantine basin: Simulations of the river Nile regimes

NASA Astrophysics Data System (ADS)

Suari, Yair; Brenner, Steve

2015-08-01

The south eastern Mediterranean is characterized by antiestuarine circulation which leads to extreme oligotrophic conditions. The Nile river that used to transport fresh water and nutrients into the basin was dammed in 1964 which led to a drastic reduction of fresh water fluxes, and later, changes in Egyptian agriculture and diet led to increased nutrient fluxes. In this paper we present the results of simulations with a biogeochemical model of the south eastern Mediterranean. Four experiments were conducted: (1) present day without riverine inputs; (2) Nile before damming (pre-1964); (3) post-damming 1995 Nile; and (4) fresh water and nutrient discharges of Israeli coastal streams. The present day input simulation (control run) successfully reproduced measured nutrient concentrations, with the exception of simulated chlorophyll concentrations which were slightly higher than observed. The pre-1964 Nile simulation showed a salinity reduction of 2 psu near the Egyptian coast and 0.5 psu along the Israeli coast, as well as elevated chlorophyll a concentrations mostly east of the Nile delta and north to Cyprus. The spring bloom extended from its present peak during February-March to a peak during February-May. The 1995 Nile simulation showed increased chlorophyll a concentrations close to the Egyptian coast. The Israeli coastal stream simulation showed that the effect of the Israeli coastal stream winter flow on chlorophyll converged to control concentrations within about one month, demonstrating the stability and sensitivity of the model to external forcing. The results of this study demonstrate the significance of fresh water fluxes in maintaining marine productivity, which may have large scale effects on the marine ecosystem.

Lagoon Restoration Project: Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

This project is a multiyear effort focusing on energy flow in the Palace of Fine Arts lagoon just outside the Exploratorium in San Francisco. Phase 1 was a pilot study to determine the feasibility of improving biological energy flow through the small freshwater lagoon, using the expertise and resources of an environmental artist in collaboration with museum biologists and arts department staff. The primary outcome of Phase 1 is an experimental fountain exhibit inside the museum designed by public artist Laurie Lundquist with Exploratorium staff. This fountain, with signage, functions both as a model for natural aeration and filtration systemsmore » and as a focal point for museum visitors to learn about how biological processes cycle energy through aquatic systems. As part of the study of the lagoon`s health, volunteers continued biweekly bird consus from March through September, 1994. The goal was to find out whether the poor water quality of the lagoon is affecting the birds. Limited dredging was undertaken by the city Parks and Recreation Department. However, a more peermanent solution to the lagoon`s ecological problems would require an ambitious redesign of the lagoon.« less

Brazil The Duck Lagoon

NASA Technical Reports Server (NTRS)

2002-01-01

This Multi-angle Imaging SpectroRadiometer (MISR) image of Brazil covers an area of about 298 kilometers x 358 kilometers, and was captured by the instrument's vertical-viewing (nadir) camera on December 27, 2001. The 'Lagoa dos Patos', in the Brazilian state of Rio Grande do Sul, translates to 'the Duck Lagoon'. It was named by 16th century Jesuit settlers, who asked the King of Spain to grant them title to the lagoon so that they could breed ducks. The King consented, but revoked his edict when he discovered that the 'duck-pond' (measuring about 14,000 square kilometers) was one of the largest lagoonal systems in the world. Note the sediment plume emanating from the southern end of the lagoon. Sailors in the 16th century imagined this outlet to be the mouth of a large river. Early Portuguese explorers mistook the entrance to the lagoon for the mouth of a great river and called it the Rio Grande. A series of wave-like points and curls form 'cusps' on the inner shores of the lagoon. The lagoon's characteristics change with short-term tide-induced cyclic perturbations, and with longer term large scale meteorological conditions. The distinctive wavelike 'cusps' along the inner shores result from the circulation, erosion and accumulation of sediments driven by wind and tidal action. The El Nino Southern Oscillation (ENSO) circulation affects precipitation amount and continental runoff, thereby changing the contents of the lagoon waters. High rainfall and increased freshwater discharge during El Nino events correspond with elevated dissolved nutrient concentrations and increased phytoplankton growth. La Nina years are dry and the associated low rainfall reduces the freshwater recharge to the lagoon, causing an increase in salinity. Occasional blooms of toxic cyanobacteria (Microcystis aeruginosa), have been registered in the lagoon when nutrient concentrations are elevated. A number of reeds and grasses are important to the lagoon estuary, including widgeon grass

Brazil: Duck Lagoon

Atmospheric Science Data Center

2013-04-18

article title:  Brazil - The Duck Lagoon     View Larger Image ... the Brazilian state of Rio Grande do Sul, translates to "the Duck Lagoon". It was named by 16th century Jesuit settlers, who asked the King ...

West Nile virus

MedlinePlus

... of standing water, such as trash bins and plant saucers (mosquitos breed in stagnant water) Community spraying for mosquitoes may also reduce mosquito breeding. Alternative Names Encephalitis - West Nile; Meningitis - West Nile ...

Identification of channel geometries applying seismic attributes and spectral decomposition techniques, Temsah Field, Offshore East Nile Delta, Egypt

NASA Astrophysics Data System (ADS)

Othman, Adel A. A.; Fathy, M.; Negm, Adel

2018-06-01

The Temsah field is located in eastern part of the Nile delta to seaward. The main reservoirs of the area are Middle Pliocene mainly consist from siliciclastic which associated with a close deep marine environment. The Distribution pattern of the reservoir facies is limited scale indicating fast lateral and vertical changes which are not easy to resolve by applying of conventional seismic attribute. The target of the present study is to create geophysical workflows to a better image of the channel sand distribution in the study area. We apply both Average Absolute Amplitude and Energy attribute which are indicated on the distribution of the sand bodies in the study area but filled to fully described the channel geometry. So another tool, which offers more detailed geometry description is needed. The spectral decomposition analysis method is an alternative technique focused on processing Discrete Fourier Transform which can provide better results. Spectral decomposition have been done over the upper channel shows that the frequency in the eastern part of the channel is the same frequency in places where the wells are drilled, which confirm the connection of both the eastern and western parts of the upper channel. Results suggest that application of the spectral decomposition method leads to reliable inferences. Hence, using the spectral decomposition method alone or along with other attributes has a positive impact on reserves growth and increased production where the reserve in the study area increases to 75bcf.

A global deltas typology of environmental stress and its relation to terrestrial hydrology

NASA Astrophysics Data System (ADS)

Tessler, Z. D.; Vorosmarty, C. J.; McDonald, K. C.; Schroeder, R.; Grossberg, M.; Gladkova, I.; Aizenman, H.

2013-12-01

River delta systems around the world are under varying degrees of environmental stress stemming from a variety of human impacts, both from upstream basin based activities and local impacts on the deltas themselves, as well as sea level rise. These stresses are known to affect rates of relative sea level rise by disrupting the delivery or deposition of sediment on the delta. We present a global database of several of these stresses, and investigate patterns of stress across delta systems. Several methods of aggregating the environmental stressors into an index score are also investigated. A statistical clustering analysis, which we refer to as a "global delta fingerprinting system", across the environmental stresses identifies systems under similar states of threat. Several deltas, including the Nile, are in unique clusters, while regional patterns are evident among deltas in Southeast Asia. These patterns are compared with observed surface inundation derived from SAR, NDVI from MODIS, river discharge estimates from the WBMplus numerical model, and ocean wave activity from WAVEWATCH III. Delta inundation sensitivity to river and coastal forcings are observed to vary with environmental stress and social indicators including population density and GDP.

A spatially resolved model of seasonal variations in phytoplankton and clam ( Tapes philippinarum) biomass in Barbamarco Lagoon, Italy

NASA Astrophysics Data System (ADS)

Spillman, C. M.; Hamilton, D. P.; Hipsey, M. R.; Imberger, J.

2008-08-01

Barbamarco Lagoon (area = 7 km 2) is in the Po River Delta, adjoining the Northern Adriatic Sea, and supports a commercially valuable clam ( Tapes philippinarum) fishery. This study investigated interactions of the lagoon with adjacent coastal waters and inland riverine inputs by modelling both the lagoon and the Northern Adriatic Sea, using a coupled three-dimensional (3D) hydrodynamic-ecological model (ELCOM-CAEDYM) adapted to include the clam population. The clam model accounted for carbon (C), nitrogen (N) and phosphorus (P) biomass in the benthos through parameterisations for filtration, excretion, egestion, respiration, mortality, and harvesting. Multiple clam size classes were included in a new population dynamics sub-model. Output from the coupled model was validated against hydrodynamic and water quality data from intensive field sampling and routine monitoring. Time scales of tidal flushing, primary production and clam grazing were investigated with the model to demonstrate that food supply to clam populations is dominated by phytoplankton inputs from the Northern Adriatic Sea. Effects of clam cultivation on nutrient concentrations and phytoplankton biomass in Barbamarco Lagoon were primarily localised, with strong tidal flushing minimising impacts of clam filtration on lagoon-wide nutrient concentrations at current clam stocking levels. Clam populations were found to alter the cycling of nutrients in the system, causing the lagoon to become a net sink for particulate organic matter and to export dissolved organic matter to the adjacent sea via tidal flushing. Ecosystem health and sensitivity of nutrient cycles to clam cultivation are important considerations for the long term sustainable management and potential expansion of the fishery.

21,000 years of Ethiopian African monsoon variability recorded in sediments of the western Nile deep-sea fan: impact of the Nile freshwater inflow for the Mediterranean thermo-haline circulation

NASA Astrophysics Data System (ADS)

Revel, Marie; Colin, Christophe; Bernasconi, Stephano; Combourieu-Nebout, Nathalie; Ducassou, Emmanuelle; Rolland, Yann; Bosch, Delphine

2014-05-01

The Nile delta sedimentation constitutes a continuous high resolution (1.6 mm/year) record of Ethiopian African monsoon regime intensity. Multiproxy analyses performed on core MS27PT recovered in hemipelagic Nile sediment margin (<90 km outward of the Rosetta mouth of the Nile) allow the quantification of the Saharan aeolian dust and the Blue/White Nile River suspended matter frequency fluctuations during the last 21 cal. ka BP. The radiogenic Sr and Nd isotopes, clay mineralogy, bulk elemental composition and palynological analyses reveal large changes in source components, oscillating between a dominant aeolian Saharan contribution during the LGM and the Late Holocene (~4 to 2 cal. ka BP), a dominant Blue/Atbara Nile River contribution during the early Holocene (15 to 8.4 cal. ka BP) and a probable White Nile River contribution during the Middle Holocene (8.4 to 4 cal. ka BP). The following main features are highlighted: 1. The rapid shift from the LGM arid conditions to the African Humid Period (AHP) started at about 15 cal. ka BP. AHP extends until 8.4 cal. ka BP, and we suggest that the Ethiopian African Monsoon maximum between 12 and 8 cal. ka BP is responsible for a larger Blue/Atbara Nile sediment load and freshwater input into the Eastern Mediterranean Sea. 2. The transition between the AHP and the arid Late Holocene is gradual and occurs in two main phases between 8.4 and 6.5 cal. ka BP and 6.5 to 3.2 cal. ka BP. We suggest that the main rain belt shifted southward from 8.4 to ~4 cal. ka BP and was responsible for progressively reduced sediment load and freshwater input into the eastern Mediterranean Sea. 3. The aridification along the Nile catchments occurred from ~4 to 2 cal. ka BP. A dry period, which culminates at 3.2 cal. ka BP, and seems to coincide with a re-establishment of increased oceanic primary productivity in the western Mediterranean Sea. We postulate that the decrease in thermo-haline water Mediterranean circulation could be part of a

Patterns of seasonal variation in lagoonal macrozoobenthic assemblages (Mellah lagoon, Algeria).

PubMed

Magni, Paolo; Draredja, Brahim; Melouah, Khalil; Como, Serena

2015-08-01

In coastal lagoons, many studies indicated that macrozoobenthic assemblages undergo marked temporal fluctuations as related to the strong environmental variability of these systems. However, most of these studies have not assessed the seasonal patterns of these fluctuations and none of them has investigated the consistency of this variation in different areas within the same lagoon system. In this study, we assessed patterns of variation at multiple temporal (date, season and year) scales in two different areas in the coastal lagoon of Mellah (northeast Algeria). These areas (hereafter Shore and Center) are representative of two different environments typically found in coastal lagoons. The Shore (water depth of about 1.5-2 m) is characterized by relatively higher hydrodynamics, sand to silty-sand sediments and the presence of vegetation (Ruppia maritima), the Center (water depth of about 3-3.5 m) is characterized by mud to sandy-mud, organic-enriched sediments due to fine particle accumulation. Results showed two distinct patterns of seasonal variation in Shore and Center assemblages for two consecutive years. In Shore, species richness (S), total abundance (N) and the abundance of several dominant taxa were highest in summer and/or autumn. This pattern can be related to the local environmental conditions maintaining relatively well oxidized conditions, while increasing food availability, and favoring the recruitment of species and individuals in summer/autumn. On the contrary in Center, S was lowest in summer and autumn, and N and the abundance of fewer dominant taxa were lowest in summer. In Center, the bivalve Loripes lucinalis showed a 10-fold increase from summer to autumn in both years, likely related to the lagoon's hydrodynamics favoring larval transport and settlement in the central sector of the lagoon. Overall, the seasonal variation found in Center followed a regression/recovery pattern typical of opportunistic assemblages occurring in confined

The fate of Mediterranean lagoons under climate change

NASA Astrophysics Data System (ADS)

Umgiesser, Georg; Ferrarin, Christian; Cucco, Andrea; De Pascalis, Francesca; Ghezzo, Michol; Bellafiore, Debora; Bajo, Marco

2014-05-01

A numerical model (SHYFEM) has been applied to 10 Mediterranean lagoons and a comparison study between the lagoons has been carried out. The lagoons are the lagoons of Venice, Marano-Grado, Varano and Lesina in the Adriatic Sea, the Taranto basin in the Ionian Sea, the Cabras lagoon in Sardinia, and the lagoons of Ganzirri and Faro in Sicily, the Mar Menor in Spain and the Nador lagoon in Morocco. These lagoons give a representative picture of the lagoons situated around the Mediterranean basin. The lagoons range from a leaky type of lagoons to a choked type. The number of inlets ranges from just one in the Nador lagoon to 6 in the case of the Marano-Grado lagoons. Tidal range is from nano-tidal to micro-tidal. The depth ranges from an average depth of 1 m to up to 40 meters. The model is a finite element model, especially suited to shallow water basins with complicated geometric and morphologic variations. The model can compute the basic hydrodynamics, dispersion of tracers, temperature and salinity evolution, sediment transport and ecological parameters. Building on an earlier study that focused on the classification of Mediterranean lagoons based on hydrodynamics, exchange rates and renewal time, this study is concerned with the changes in physical parameters under climate change. Data from IPCC has been used to simulate the changes in renewal time, salinity and temperature of all lagoons, with respect to the control simulation. Whenever possible downscaled data for the Mediterranean basin have been used. Sea level rise scenarios are taken from the last IPCC report. The model has been applied in its 3D version and the chosen setup allows a comparison between results in the different lagoons. Results indicate that the differences of renewal time between all studied lagoons become smaller. This means that leaky lagoons become less leaky and choked lagoons less choked. What concerns temperature and salinity, changes occurring in the sea are amplified inside lagoons

Metals in some lagoons of Mexico.

PubMed

Vazquez, F G; Sharma, V K; Alexander, V H; Frausto, C A

1995-02-01

The concentrations of metals, Cd, Cu, Fe, Mn, Ni, Pb, and Zn were determined in some lagoons to establish the level of metal pollution. The lagoons studied were Alvarado lagoon, Veracruz; San Andres lagoon, Tamaulipas; and Terminos lagoon, Campeche. The concentrations were determined in water, oyster (Crassostrea virginica), and sediments. Metals were accumulated in either oysters or sediments. Cu and Zn were higher in oysters and Fe and Mn were higher in sediments. The results in water samples were compared with the limit established by the Secretaria de Ecologia and Desarrollo Urbano Report and briefly discussed.

Metals in some lagoons of Mexico.

PubMed Central

Vazquez, F G; Sharma, V K; Alexander, V H; Frausto, C A

1995-01-01

The concentrations of metals, Cd, Cu, Fe, Mn, Ni, Pb, and Zn were determined in some lagoons to establish the level of metal pollution. The lagoons studied were Alvarado lagoon, Veracruz; San Andres lagoon, Tamaulipas; and Terminos lagoon, Campeche. The concentrations were determined in water, oyster (Crassostrea virginica), and sediments. Metals were accumulated in either oysters or sediments. Cu and Zn were higher in oysters and Fe and Mn were higher in sediments. The results in water samples were compared with the limit established by the Secretaria de Ecologia and Desarrollo Urbano Report and briefly discussed. PMID:7621796

Lagoon Seepage Testing Report for Central Facilities Area (CFA) Sewage Lagoons at Idaho National Laboratory, Butte County, Idaho

DOE Office of Scientific and Technical Information (OSTI.GOV)

Morrison, Bridger

J-U-B ENGINEERS, Inc. (J-U-B) performed seepage tests on the CFA Wastewater Lagoons 1, 2, and 3 between August 26th and September 22nd, 2014. The lagoons were tested to satisfy the Idaho Department of Environmental Quality (DEQ) Rules (IDAPA 58.01.16) that require all lagoons be tested at a frequency of every 10 years and the Compliance Activity CA-141-03 in the DEQ Wastewater Reuse Permit for the CFA Sewage Treatment Plant (LA-000141-03). The lagoons were tested to determine if the average seepage rates are less than 0.25 in/day, the maximum seepage rate allowed for lagoons built prior to April 15, 2007. Themore » average seepage rates were estimated for each lagoon and are given in Table-ES1. The average seepage rates for Lagoons 1 and 2 are less than the allowable seepage rate of 0.25 in/day. Lagoon 1 and 2 passed the seepage test and will not have to be tested again until the year 20241. However, the average seepage rate for Lagoon 3 appears to exceed the allowable seepage rate of 0.25 in/day which means the potential source for the excessive leakage should be investigated further.« less

Groundwater-driven nutrient inputs to coastal lagoons: The relevance of lagoon water recirculation as a conveyor of dissolved nutrients.

PubMed

Rodellas, Valentí; Stieglitz, Thomas C; Andrisoa, Aladin; Cook, Peter G; Raimbault, Patrick; Tamborski, Joseph J; van Beek, Pieter; Radakovitch, Olivier

2018-06-16

Evaluating the sources of nutrient inputs to coastal lagoons is required to understand the functioning of these ecosystems and their vulnerability to eutrophication. Whereas terrestrial groundwater processes are increasingly recognized as relevant sources of nutrients to coastal lagoons, there are still limited studies evaluating separately nutrient fluxes driven by terrestrial groundwater discharge and lagoon water recirculation through sediments. In this study, we assess the relative significance of these sources in conveying dissolved inorganic nutrients (NO 3 - , NH 4 + and PO 4 3- ) to a coastal lagoon (La Palme lagoon; France, Mediterranean Sea) using concurrent water and radon mass balances. The recirculation of lagoon water through sediments represents a source of NH 4 + (1900-5500 mol d -1 ) and PO 4 3- (22-71 mol d -1 ), but acts as a sink of NO 3 - . Estimated karstic groundwater-driven inputs of NO 3 - , NH 4 + and PO 4 3- to the lagoon are on the order of 200-1200, 1-12 and 1.5-8.7 mol d -1 , respectively. A comparison between the main nutrient sources to the lagoon (karstic groundwater, recirculation, diffusion from sediments, inputs from a sewage treatment plant and atmospheric deposition) reveals that the recirculation of lagoon water through sediments is the main source of both dissolved inorganic nitrogen (DIN) and phosphorous (DIP) to La Palme lagoon. These results are in contrast with several studies conducted in systems influenced by terrestrial groundwater inputs, where groundwater is often assumed to be the main pathway for dissolved inorganic nutrient loads. This work highlights the important role of lagoon water recirculation through permeable sediments as a major conveyor of dissolved nutrients to coastal lagoons and, thus, the need for a sound understanding of the recirculation-driven nutrient fluxes and their ecological implications to sustainably manage lagoonal ecosystems. Copyright © 2018. Published by Elsevier B.V.

STS-57 Earth observation of the Eastern Mediterranean, Nile River, Asia Minor

NASA Technical Reports Server (NTRS)

1993-01-01

STS-57 Earth observation of the Eastern Mediterranean. From a high vantage point over the Nile River, this north-looking view shows the eastern Mediterranean and the entire landmass of Asia Minor, with the Black Sea dimly visible at the horizon. Many of the Greek islands can be seen in the Aegean Sea (top left), off the coast of Asia Minor. Cyprus is visible under atmospheric dust in the northeastern corner of the Mediterranean. The dust cloud covers the east end of the Mediterranean, its western edge demarcated by a line that cuts the center of the Nile Delta. This dust cloud originated far to the west, in Algeria, and moved northeast. A gyre of clouds in the southeast corner of the Mediterranean indicates a complementary counterclockwise (cyclonic) circulation of air. The Euphrates River appears as a thin green line (upper right) in the yellow Syrian desert just south of the mountains of Turkey. The Dead Sea (lower right) lies in a rift valley which extends north into Turkey and sout

Are coastal lagoons physically or biologically controlled ecosystems? Revisiting r vs. K strategies in coastal lagoons and estuaries

NASA Astrophysics Data System (ADS)

Pérez-Ruzafa, Angel; Marcos, Concepción; Pérez-Ruzafa, Isabel María; Pérez-Marcos, María

2013-11-01

Environmental stress influences biological assemblages, with species responding to stress by adopting particular life-history strategies (e.g., r vs. K). Coastal lagoons and estuaries are considered naturally stressed and physically controlled systems with frequent environmental disturbances and fluctuations. At the same time, their transitional nature (between terrestrial, freshwater and marine) makes them especially vulnerable to human impacts and land and freshwater inputs. As a result, it is hypothesised that residents of coastal lagoons would display characteristics of r-selected species. The r-strategy involves increased reproductive effort through early reproduction, small and numerous offspring with a large dispersive capability, short lifespan and small adult body size. Together, these traits provide a selective advantage in such unpredictable or short-lived environments. Alternatively, immigrants to coastal lagoons should mostly be K-strategists, with a competitive advantage over the r-strategists, at least on a temporary time scale. These hypotheses were explored using a dataset from 73 Atlanto-Mediterranean sites: 27 estuaries, 42 coastal lagoons and 4 from the sea, obtained from published sources. A detailed analysis of the distributions of the different resident fish species according to lagoon characteristics indicated that in lagoons with a higher marine influence the families Gobiidae, Blenniidae and Syngnathidae were common, while lagoons with freshwater influence are characterized by Cyprinidae and other freshwater species. In analyzing the biological strategies of lagoon species we found that fish assemblages inhabiting marine influenced lagoons were characterized by solitary, necto-benthonic sedentary species. These species are often hermaphroditic, with benthic broods and many exhibit brooding behaviour. This suggests that marine influenced lagoons are dominated by K-strategist species, while r-strategy species will be more common in

What's West Nile Virus?

MedlinePlus

... for Educators Search English Español What's West Nile Virus? KidsHealth / For Kids / What's West Nile Virus? Print en español ¿Qué es el Virus del Nilo Occidental? What exactly is the West ...

From non-covalent binding to irreversible DNA lesions: nile blue and nile red as photosensitizing agents

PubMed Central

Gattuso, Hugo; Besancenot, Vanessa; Grandemange, Stéphanie; Marazzi, Marco; Monari, Antonio

2016-01-01

We report a molecular modeling study, coupled with spectroscopy experiments, on the behavior of two well known organic dyes, nile blue and nile red, when interacting with B-DNA. In particular, we evidence the presence of two competitive binding modes, for both drugs. However their subsequent photophysical behavior is different and only nile blue is able to induce DNA photosensitization via an electron transfer mechanism. Most notably, even in the case of nile blue, its sensitization capabilities strongly depend on the environment resulting in a single active binding mode: the minor groove. Fluorescence spectroscopy confirms the presence of competitive interaction modes for both sensitizers, while the sensitization via electron transfer, is possible only in the case of nile blue. PMID:27329409

Natural equilibria and anthropic effects on sediment transport in big river systems: The Nile case

NASA Astrophysics Data System (ADS)

Garzanti, Eduardo; Andò, Sergio; Padoan, Marta; Vezzoli, Giovanni; Villa, Igor

2014-05-01

The Nile River flows for ~ 6700 km, from Burundi and Rwanda highlands south of the Equator to the Mediterranean Sea at northern subtropical latitudes. It is thus the longest natural laboratory on Earth, a unique setting in which we are carrying out a continuing research project to investigate changes in sediment composition associated with a variety of chemical and physical processes, including weathering in equatorial climate and hydraulic sorting during transport and deposition. Petrographic, mineralogical, chemical, and isotopic fingerprints of sand and mud have been monitored along all Nile branches, from the Kagera and White Nile draining Archean, Paleoproterozoic and Mesoproterozoic basements uplifted along the western branch of the East African rift, to the Blue Nile and Atbara Rivers sourced in Ethiopian volcanic highlands made of Oligocene basalt. Downstream of the Atbara confluence, the Nile receives no significant tributary water and hardly any rainfall across the Sahara. After construction of the Aswan High Dam in 1964, the Nile ceased to be an active conveyor-belt in Egypt, where the mighty river has been tamed to a water canal; transported sediments are thus chiefly reworked from older bed and levee deposits, with minor contributions from widyan sourced in the Red Sea Hills and wind-blown desert sand and dust. Extensive dam construction has determined a dramatic sediment deficit at the mouth, where deltaic cusps are undergoing ravaging erosion. Nile delta sediments are thus recycled under the effect of dominant waves from the northwest, the longest Mediterranean fetch direction. Nile sands, progressively enriched in more stable minerals such as quartz and amphiboles relative to volcanic rock fragments and pyroxene, thus undergo multistep transport by E- and NE-directed longshore currents all along the coast of Egypt and Palestine, and are carried as far as Akko Bay in northern Israel. Nile mud reaches the Iskenderun Gulf in southern Turkey. A full

Applying a probabilistic seismic-petrophysical inversion and two different rock-physics models for reservoir characterization in offshore Nile Delta

NASA Astrophysics Data System (ADS)

Aleardi, Mattia

2018-01-01

We apply a two-step probabilistic seismic-petrophysical inversion for the characterization of a clastic, gas-saturated, reservoir located in offshore Nile Delta. In particular, we discuss and compare the results obtained when two different rock-physics models (RPMs) are employed in the inversion. The first RPM is an empirical, linear model directly derived from the available well log data by means of an optimization procedure. The second RPM is a theoretical, non-linear model based on the Hertz-Mindlin contact theory. The first step of the inversion procedure is a Bayesian linearized amplitude versus angle (AVA) inversion in which the elastic properties, and the associated uncertainties, are inferred from pre-stack seismic data. The estimated elastic properties constitute the input to the second step that is a probabilistic petrophysical inversion in which we account for the noise contaminating the recorded seismic data and the uncertainties affecting both the derived rock-physics models and the estimated elastic parameters. In particular, a Gaussian mixture a-priori distribution is used to properly take into account the facies-dependent behavior of petrophysical properties, related to the different fluid and rock properties of the different litho-fluid classes. In the synthetic and in the field data tests, the very minor differences between the results obtained by employing the two RPMs, and the good match between the estimated properties and well log information, confirm the applicability of the inversion approach and the suitability of the two different RPMs for reservoir characterization in the investigated area.

The occurrence and distribution of high-arsenic, selenium, tin and antimony in bottom sediments of Burullus lagoon and its effects on human health, Egypt

NASA Astrophysics Data System (ADS)

El-Badry, Abd El-Monsef Ahmed; Khalifa, Moataz M.

2017-12-01

Burullus lagoon is one of four natural water bodies known as northern Egyptian delta lakes. The lagoon extended maximum long of 53 km long and maximum width 13 km with an area about 420 km2. The pollution of bottom sediment of the Burullus lagoon is indicative of both water and food web quality in general. A few research were carried out related to study of arsenic, selenium, tin and antimony. The main objective of this study is assessment of environmental effects of arsenic, selenium, tin and antimony metals, twenty-one samples were collect from bottom sediments sample among sites covering the Burullus Lagoon during summer 2014, and analyzed by using simultaneous inductively coupled plasma emission spectrometer. The contamination with these metals was evaluate by applying index of contamination factor (CF) and geoaccumulation (Igeo). The relative order of abundance of the potentially toxic metals in the lagoon's sediment is Se > Sn > Sb > As The territory around inlet and southeastern drain show considerable pollution by the studied toxic metals. The main reason for such pollution resulting from industrial activities and agricultural drains. The disregards of the anthropogenic activities are the main reason of pollution in the studied lagoon. Construction of special units for treatment and purification of all types of drainage and wastewater (agricultural, industrial). Successive analysis of lake water to assess the amount of pollutants to make suitable decisions. Take an action to prohibit throwing of wastes in the lagoon. Consumption of the lake water for agricultural and industrial must be under control in order to decrease water pollution.

The Great Diversion: Danube Delta under Human Control (Invited)

NASA Astrophysics Data System (ADS)

Giosan, L.

2009-12-01

Many deltas around the world are suffering from sediment deficits that render them unstable to current and predicted rates of sea level rise. One solution proposed to alleviate the complete or partial drowning of such deltas is the use of river diversions to increase the quantity of sediment supplied to the delta plain to support marsh accretion. We examine the results of a half century old program of diversion in the Danube delta that led to the creation of an extensive diversion channel network akin in scope and size to a natural deltaic network. Danube’s importance as a shipping route increased after the Crimean War in the 1850s; the European Danube Commission was charged with maintaining the Sulina distributary as a shipping channel until 1940s. In the same period, several canals were dug to aid fishing in lakes and bring freshwater to brackish lagoons. After World War II, Communist authorities dramatically increased the number of canals for fishing, fish-farming and reed harvesting. New data on sedimentation rates and estimates of sediment fluxes suggest that the intensive canalization in the second half of the 20th Century led to increased sediment deposition that compensated the decreasing sediment discharge linked to damming within the internal fluvial part of the delta; however, the external marine delta has become increasingly sediment starved during the same interval. We emphasize the similarities and contrasts between the “human-controlled” and natural deltaic channel networks of the Danube delta and discuss the sustainability of the delta as a sediment budget problem within a sea level rise context.

The White Nile as a source for Nile sediments: Assessment using U-Pb geochronology of detrital rutile and monazite

NASA Astrophysics Data System (ADS)

Be'eri-Shlevin, Yaron; Avigad, Dov; Gerdes, Axel

2018-04-01

Basement terranes exposed at the headwaters of the White Nile include Archean-Paleoproterozoic rocks of the Congo Craton, whose northern sectors were severely reworked during Neoproterozoic orogeny. New U-Pb analyses of detrital rutile and monazite from early Quaternary to Recent coastal quartz sands of Israel, at the northeast extension of the Nile sedimentary system, yield mostly late Neoproterozoic ages, with a dominant peak at ca. 600 Ma. While derivation from the reworked sectors of the Craton cannot be negated, the absence of pre-Neoproterozoic rutile and monazite indicates that the detrital contribution from the Congo cratonic nuclei into the main Nile was insignificant. The near absence of White Nile basement-derived heavy minerals from the Nile sands arriving at the Eastern Mediterranean may be explained by a number of factors such as relatively minor erosion of the Cratonic basement nuclei during the Quaternary, late connection of the White Nile to the main Nile system with a possibility that northern segments connected prior to more southerly ones, and a long-term effective sediment blockage mechanism at the mouth of White Nile. Likewise, our previous study demonstrated that Nile sands display a detrital zircon U-Pb-Hf pattern consistent with significant recycling of NE African Paleozoic sediments. It is thus plausible that any detrital contribution from White Nile basement rocks was thoroughly diluted by eroded Paleozoic sediments, or their recycled products, which were likely the greatest sand reservoir in the region. This study adds to previous studies showing the advantage of a multi mineral U-Pb geochronology strategy in constraining sediment provenance patterns.

Aerated Lagoons. Student Manual. Biological Treatment Process Control.

ERIC Educational Resources Information Center

Andersen, Lorri

This student manual contains the textual material for a unit which focuses on the structural and operationally unique features of aerated lagoons. Topic areas discussed include: (1) characteristics of completely mixed aerated lagoons; (2) facultative aerated lagoons; (3) aerated oxidation ponds; (4) effects of temperature on aerated lagoons; (5)…

[Circulation of West Nile virus (Flaviviridae, Flavivirus) and some other arboviruses in the ecosystems of Volga delta, Volga-Akhtuba flood-lands and adjoining arid regions (2000-2002)].

PubMed

L'vov, D K; Kovtunov, A I; Iashkulov, K B; Gromashevskiĭ, V L; Dzharkenov, A F; Shchelkanov, M Iu; Kulikova, L N; Savage, H M; Chimidova, N M; Mikhaliaeva, L B; Vasil'ev, A V; Galkina, I V; Prilipov, A G; Kinney, R M; Samokhvalov, E I; Bushkieva, B Ts; Gubler, D J; Al'khovskiĭ, S K; Aristova, V A; Deriabin, P G; Butenko, A M; Moskvina, T M; L'vov, D N; Zlobina, L V; Liapina, O V; Sadykova, G K; Shatalov, A G; Usachev, V E; Voronina, A G; Luneva, L I

2004-01-01

Comprehensive virological, serological as well as genetic studies of the ecology of West Nile Virus (WNV) as well as of some other arboviruses were undertaken in different ecosystems in the territories of the Astrakhan Region and of the Kalmyk Republic. The main carriers (mosquitoes, ticks, birds and mammals) were defined as involved in the circulation of viruses within the natural and anthropogenic biocenosis. Phylogenetic examinations of isolated strains and samples, which were positive in RT-PCR, showed an absolute predominance of genotype I virus that was most closely related to American and Israeli strains. At the same time, epidemic strains had up to 6% of nucleotide differences versus the historic strains isolated in the same region 20-30 years ago. Besides, the circulation of genotype IV was discovered; it was characterized by a lower pathogenicity, which, possibly, ensures the shaping of a pronounced immune interlayer bearing no epidemic consequences. An analysis of the study results on the WNV ecology denotes the epicenter of the endemic territory located in the middle part of the Volga delta.

Recent sedimentary history of organic matter and nutrient accumulation in the Ohuira Lagoon, northwestern Mexico.

PubMed

Ruiz-Fernández, Ana Carolina; Frignani, Mauro; Tesi, Tommaso; Bojórquez-Leyva, Humberto; Bellucci, Luca Giorgio; Páez-Osuna, Federico

2007-08-01

(210)Pb-derived sediment accumulation rates, as well as a suite of geochemical proxies (Al, Fe, delta(13)C, delta(15)N), were used to assess the time-dependent variations of C, N, and P fluxes recorded in two sediment cores collected at Ohuira Lagoon, in the Gulf of California, Mexico, during the last 100 years. Sedimentary C, N, and P concentrations increased with time and were related to land clearing, water impoundment, and agriculture practices, such as fertilization. C:N:P ratios and delta(13)C suggested an estuarine system that is responsive to increased C loading from a N-limited phytoplankton community, whereas delta(15)N values showed the transition between an estuarine-terrestrial to an estuarine-more marine environment, as a consequence of the declining freshwater supply into the estuary due to the channeling and impoundment of El Fuerte River between 1900 and 1956. The recent increases in nutrient fluxes (2- to 9-fold the pre-anthropogenic fluxes of C and N, and 2 to 13 times for P) taking place in the mainland from the 1940s, were related to the expansion of the intensive agriculture fields and to the more recent development of shrimp farming activities.

Nile River, Lake Nasser, Aswan Dam, Egypt

NASA Image and Video Library

1991-08-11

Egypt's High Aswan Dam on the Nile River at the first cataracts, Nile River, (24.0N, 33.0E) was completed in 1971 to provide cheap hydroelectric power and to regulate the historically uneven flow of the Nile River. The contrast between the largely base rock desert east of the Nile versus the sand covered desert west of the river and the ancient irrigated floodplain downstream from the damsite is clearly shown.

Nile River, Lake Nasser, Aswan Dam, Egypt

NASA Technical Reports Server (NTRS)

1991-01-01

Egypt's High Aswan Dam on the Nile River at the first cataracts, Nile River, (24.0N, 33.0E) was completed in 1971 to provide cheap hydroelectric power and to regulate the historically uneven flow of the Nile River. The contrast between the largely base rock desert east of the Nile versus the sand covered desert west of the river and the ancient irrigated floodplain downstream from the damsite is clearly shown.

Influence of salinity regime on the food-web structure and feeding ecology of fish species from Mediterranean coastal lagoons

NASA Astrophysics Data System (ADS)

Prado, Patricia; Vergara, Carolina; Caiola, Nuno; Ibáñez, Carles

2014-02-01

Dual δ15N and δ13C analyses and estimates of biomass were used to characterize the food webs of valuable fish species in three coastal lagoons of the Ebro Delta subjected to contrasting salinity regimes (polyhaline in the Tancada lagoon, mesohaline in the Encanyissada and oligohaline in the Clot lagoon). The δ13C signatures of the entire food-web including primary producers, sediment organic matter and consumers showed the most enriched values in the Tancada lagoon (from approx. -4.8‰ in sediments to -19.7‰ in fish) and the most depleted ones in the Clot lagoon (from approx. -11.4‰ in sediments to -25.4‰ in fish), consistent with dominant contributions from marine and continental sources, respectively. For δ15N, particularly high values were detected in the submersed vegetation (11.3 ± 0.3‰) together with more enriched sediment values at lower salinities (by approx. 2.5‰), suggesting that historical loadings of agricultural fertilizers are still retained by the systems and transmitted across trophic levels. Negative relationships between δ15N and salinity were also observed for the amphipod Gammarus aequicauda and the isopod Sphaeroma hookeri, suggesting some consumption of accumulated and resuspended detrital material. In contrast, δ15N signatures of fish showed lower values and inconsistent patterns, possibly because most species have a seasonal use of the lagoons. The biomass of fish species did not show a clear effect of the salinity regime (except for the mosquitofish Gambusia holbrookii), but results for mixing models suggest a diet shift from higher contribution of zooplankton size fractions in the Encanyissada (from 57 to 73%) to macrofauna at the other lagoons (from 40 to 67%). We suggest that alterations in salinity might modify the trophic dynamics of the systems from benthic to planktonic pathways, without large-scale differences in δ15N of fish suggestive of similar trophic levels.

Silica in invasive wetland plant species of lagoons, Côte d'Ivoire: Spatio-temporal patterns

NASA Astrophysics Data System (ADS)

José-mathieu Koné, Yéfanlan; Schoelynck, Jonas

2017-04-01

Tropical wetlands are known to accumulate a large quantity of Biogenic Silica (BSi) produced by wetland plant species (Struyf et al., 2015), and approximately 70-80% of the total supply of Dissolved Si (DSi) to the coastal zone occurs in (sub) tropical river systems (Jennerjahn et al. 2006). However, the data at these latitudes are limited. Here, we present the BSi concentration from eleven invasive macrophyte species randomly collected in three small ( 800ha) lagoons of Côte d'Ivoire during 12 months. Our data showed a large spatio-temporal variability of BSi in the three lagoons with no consistent trends. In general, the BSi concentrations obtained were high and values ranged from 0 to 54 mg g-1 through the entire sampling period, with the highest values found in Acroceras zizaniodes (emergent species of Poaceae). In general, free floating species had significantly less BSi than emergent species (P<0.0001) which corroborates with the earlier findings of Schoelynck and Struyf (2016). However, the concentrations of BSi found in Salvinia molesta (a free floating species of fern, Salviniaceae) at the young stage were similar to those found in the emergent species. Based on yearly averages, highest BSi values were observed in Kodjoboué lagoon, and the lowest in the Ono lagoon that is 80% covered by macrophytes. Moreover, the dissolved silica (DSi) concentrations were systematically higher in Ono Lagoon than in Kodjoboué Lagoon. We conclude that in an eutrophic system Si accumulating in aquatic macrophytes is not related to Si availability but to other environmental factors. Jennerjahn, T.C., Knoppers, B.A., de Souze, W.F.L., Brunskill, G.J., Silva, E.I.L., Adi, S. et al., 2006. Factors controlling dissolved silica in tropical rivers. In: Ittekot, V. (ed) The silicon cycle. Island Press, Washington, D. C, pp 29-51 Schoelynck J and Struyf E, 2016. Silicon in aquatic vegetation. Functional Ecology. 30: 1323-1330. Struyf, E., Mosimane, K., Van Pelt, D., Murray

Application of different classification methods for litho-fluid facies prediction: a case study from the offshore Nile Delta

NASA Astrophysics Data System (ADS)

Aleardi, Mattia; Ciabarri, Fabio

2017-10-01

In this work we test four classification methods for litho-fluid facies identification in a clastic reservoir located in the offshore Nile Delta. The ultimate goal of this study is to find an optimal classification method for the area under examination. The geologic context of the investigated area allows us to consider three different facies in the classification: shales, brine sands and gas sands. The depth at which the reservoir zone is located (2300-2700 m) produces a significant overlap of the P- and S-wave impedances of brine sands and gas sands that makes discrimination between these two litho-fluid classes particularly problematic. The classification is performed on the feature space defined by the elastic properties that are derived from recorded reflection seismic data by means of amplitude versus angle Bayesian inversion. As classification methods we test both deterministic and probabilistic approaches: the quadratic discriminant analysis and the neural network methods belong to the first group, whereas the standard Bayesian approach and the Bayesian approach that includes a 1D Markov chain a priori model to constrain the vertical continuity of litho-fluid facies belong to the second group. The ability of each method to discriminate the different facies is evaluated both on synthetic seismic data (computed on the basis of available borehole information) and on field seismic data. The outcomes of each classification method are compared with the known facies profile derived from well log data and the goodness of the results is quantitatively evaluated using the so-called confusion matrix. The results show that all methods return vertical facies profiles in which the main reservoir zone is correctly identified. However, the consideration of as much prior information as possible in the classification process is the winning choice for deriving a reliable and physically plausible predicted facies profile.

Ruminant Brucellosis in the Kafr El Sheikh Governorate of the Nile Delta, Egypt: Prevalence of a Neglected Zoonosis

PubMed Central

Hegazy, Yamen M.; Moawad, Amgad; Osman, Salama; Ridler, Anne; Guitian, Javier

2011-01-01

Background Brucellosis is a neglected tropical zoonosis allegedly reemerging in Middle Eastern countries. Infected ruminants are the primary source of human infection; consequently, estimates of the frequency of ruminant brucellosis are useful elements for building effective control strategies. Unfortunately, these estimates are lacking in most Middle East countries including Egypt. Our objectives are to estimate the frequency of ruminant brucellosis and to describe its spatial distribution in Kafr El Sheikh Governorate, Nile Delta, Egypt. Methodology/Principal Findings We conducted a cross-sectional study in which 791 sheep, 383 goats, 188 cattle milk tanks and 173 buffalo milk tanks were randomly selected in 40 villages and tested for the presence of antibodies against Brucella spp. The seroprevalence among different species was estimated and visualized using choropleth maps. A spatial scanning method was used to identify areas with significantly higher proportions of seropositive flocks and milk tanks. We estimated that 12.2% of sheep and 11.3% of goats in the study area were seropositive against Brucella spp. and that 12.2% and 12% of cattle and buffalo milk tanks had antibodies against Brucella spp. The southern part of the governorate had the highest seroprevalence with significant spatial clustering of seropositive flocks in the proximity of its capital and around the main animal markets. Conclusions/ Significance Our study revealed that brucellosis is endemic at high levels in all ruminant species in the study area and questions the efficacy of the control measures in place. The high intensity of infection transmission among ruminants combined with high livestock and human density and widespread marketing of unpasteurized milk and dairy products may explain why Egypt has one of the highest rates of human brucellosis worldwide. An effective integrated human-animal brucellosis control strategy is urgently needed. If resources are not sufficient for nationwide

Ruminant brucellosis in the Kafr El Sheikh Governorate of the Nile Delta, Egypt: prevalence of a neglected zoonosis.

PubMed

Hegazy, Yamen M; Moawad, Amgad; Osman, Salama; Ridler, Anne; Guitian, Javier

2011-01-11

Brucellosis is a neglected tropical zoonosis allegedly reemerging in Middle Eastern countries. Infected ruminants are the primary source of human infection; consequently, estimates of the frequency of ruminant brucellosis are useful elements for building effective control strategies. Unfortunately, these estimates are lacking in most Middle East countries including Egypt. Our objectives are to estimate the frequency of ruminant brucellosis and to describe its spatial distribution in Kafr El Sheikh Governorate, Nile Delta, Egypt. We conducted a cross-sectional study in which 791 sheep, 383 goats, 188 cattle milk tanks and 173 buffalo milk tanks were randomly selected in 40 villages and tested for the presence of antibodies against Brucella spp. The seroprevalence among different species was estimated and visualized using choropleth maps. A spatial scanning method was used to identify areas with significantly higher proportions of seropositive flocks and milk tanks. We estimated that 12.2% of sheep and 11.3% of goats in the study area were seropositive against Brucella spp. and that 12.2% and 12% of cattle and buffalo milk tanks had antibodies against Brucella spp. The southern part of the governorate had the highest seroprevalence with significant spatial clustering of seropositive flocks in the proximity of its capital and around the main animal markets. Our study revealed that brucellosis is endemic at high levels in all ruminant species in the study area and questions the efficacy of the control measures in place. The high intensity of infection transmission among ruminants combined with high livestock and human density and widespread marketing of unpasteurized milk and dairy products may explain why Egypt has one of the highest rates of human brucellosis worldwide. An effective integrated human-animal brucellosis control strategy is urgently needed. If resources are not sufficient for nationwide implementation, high-risk areas could be prioritized.

Redox-induced mobilization of copper, selenium, and zinc in deltaic soils originating from Mississippi (U.S.A.) and Nile (Egypt) River Deltas: A better understanding of biogeochemical processes for safe environmental management.

PubMed

Shaheen, Sabry M; Frohne, Tina; White, John R; DeLaune, Ron D; Rinklebe, Jörg

2017-01-15

Studies about the mobilization of potentially toxic elements (PTEs) in deltaic soils can be challenging, provide critical information on assessing the potential risk and fate of these elements and for sustainable management of these soils. The impact of redox potential (E H ), pH, iron (Fe), manganese (Mn), sulfate (SO 4 2- ), chloride (Cl - ), aliphatic dissolved organic carbon (DOC), and aromatic dissolved organic carbon (DAC) on the mobilization of copper (Cu), selenium (Se), and zinc (Zn) was studied in two soils collected from the Nile and Mississippi Rivers deltaic plains focused on increasing our understanding of the fate of these toxic elements. Soils were exposed to a range of redox conditions stepwise from reducing to oxidizing soil conditions using an automated biogeochemical microcosm apparatus. Concentrations of DOC and Fe were high under reducing conditions as compared to oxidizing conditions in both soils. The proportion of DAC in relation to DOC in solution (aromaticity) was high in the Nile Delta soil (NDS) and low in the Mississippi Delta soil (MDS) under oxidizing conditions. Mobilization of Cu was low under reducing conditions in both soils which was likely caused by sulfide precipitation and as a result of reduction of Cu 2+ to Cu 1+ . Mobilization of Se was high under low E H in both soils. Release of Se was positively correlated with DOC, Fe, Mn, and SO 4 2- in the NDS, and with Fe in the MDS. Mobilization of Zn showed negative correlations with E H and pH in the NDS while these correlations were non-significant in the MDS. The release dynamics of dissolved Zn could be governed mainly by the chemistry of Fe and Mn in the NDS and by the chemistry of Mn in the MDS. Our findings suggest that a release of Se and Zn occurs under anaerobic conditions, while aerobic conditions favor the release of Cu in both soils. In conclusion, the release of Cu, Se, and Zn under different reducing and oxidizing conditions in deltaic wetland soils should be taken

Species Composition and WNV Screening of Mosquitoes from Lagoons in a Wetland Area of the Algarve, Portugal

PubMed Central

Freitas, Ferdinando B.; Novo, Maria Teresa; Esteves, Aida; de Almeida, A. Paulo G.

2012-01-01

The aim of this study was to evaluate mosquito abundance, species diversity, larval and adult population dynamics in seven lagoons integrated in the wetland coastal system of the Algarve, Portugal, in the summer of 2007, as well as the screening of these for West Nile virus (WNV). WNV has been isolated from mosquitoes in this region, in the summer of 2004, next to the putative area of infection of two linked human WN cases. Adult mosquitoes were collected with CDC traps baited with CO2, and potential breeding sites were surveyed for immature stages. Morphological identification of 1,432 adult mosquitoes and 85 larvae revealed the presence of 10 species: Anopheles atroparvus, Anopheles algeriensis, Coquillettidia richiardii, Culex modestus, Culex pipiens, Culex theileri, Culex univittatus, Culiseta longiareolata, Aedes caspius, and Aedes detritus. Adult mosquito peak densities were recorded in July, contrasting with null larval breeding in the same month in the surveyed biotopes. Most abundant species were C. pipiens (52%), C. theileri (29%), and A. caspius (11%). Lagoon Salgados and Quinta das Salinas, exhibited the highest similarity of culicid fauna, despite being most distant from each other, Female mosquitoes (1,249 specimens) screened by RT-PCR, did not reveal WNV products. However, previous detection of WNV activity in this area, susceptible to re-introductions, demands for continued vigilance. PMID:22347862

Environmental changes in the Moulay Bousselham lagoon (Morocco) during the last 7 000 years using a multiproxy approach

NASA Astrophysics Data System (ADS)

Zourarah, Bendahhou; Maanan, Mohamed; Conceição Freitas, Maria; Leroy, Suzanne; Andrade, César; Cearreta, Alejandro; Cruces, Anabela

2016-04-01

; it increases soil erosion in the sedimentary flux increases to the basin and promotes the infill of the lagoon. During the middle Ages, the lagoon evolved to a semi-closed gulf, communicating by one tidal inlet with the ocean, which was deep enough for navigation. Between 1350 and 250 BP, the sedimentological interpretation shows that muddy deposits were set up by low currents with very low or simple settling in a quiet environment. These levels reflect the closure of the inlet of the lagoon, probably accentuated by the establishment of the Delta Drader isolating the northern part of the lagoon. Arid climatic conditions have led to a reduction of inputs of Drader River. The top part of the core is marked by the presence of fine sandy sediment, poorly sorted with a negative skewness. This level is characterized by abundant foraminifera association with low diversity (Ammonia tepida, Criboelphidiu moceanensis and Haynesina germanica) which corresponds to a brackish lagoon deposit. Currently, the lagoon is reduced to half; it is separated from Merja Ras Ed-Dora which is completely transformed into an agricultural area since the early 20 th century. Finally, the Nador Canal construction (1953) accelerated filling of the Moulay Bousselham lagoon.

Flushing of a coastal lagoon in the Red Sea

NASA Astrophysics Data System (ADS)

Sultan, S. A. R.; Ahmad, F.

1990-09-01

Shu'aiba Lagoon (Lat. 20°45'N; Long. 39°28'E) is located on the eastern coast of the Red Sea. It is relatively shallow with an area of approximately 11·7 km 2. The inlet to the lagoon is narrow with a cross-sectional area of about 245 m 2. This lagoon is a future site to develop mariculture. With this objective in view the flushing time scale of the lagoon was calculated, as flushing is an important abiotic factor in lagoon ecology. The average flushing time for the months February to June and September to November is about 20 days. Oceanic inputs play an important part in the process of fertilization of the lagoons. The marine environment in arid zone lagoons is under natural stress due to high temperatures and salinities. However, the flushing time scale of 20 days may not exert intolerable stress on the ecology of the Shu'aiba Lagoon.

West Nile virus: North American experience

USGS Publications Warehouse

Hofmeister, Erik K.

2011-01-01

West Nile virus, a mosquito-vectored flavivirus of the Japanese encephalitis serogroup, was first detected in North America following an epizootic in the New York City area in 1999. In the intervening 11 years since the arrival of the virus in North America, it has crossed the contiguous USA, entered the Canadian provinces bordering the USA, and has been reported in the Caribbean islands, Mexico, Central America and, more recently, South America. West Nile virus has been reported in over 300 species of birds in the USA and has caused the deaths of thousands of birds, local population declines of some avian species, the clinical illness and deaths of thousands of domestic horses, and the clinical disease in over 30 000 Americans and the deaths of over 1000. Prior to the emergence of West Nile virus in North America, St. Louis encephalitis virus and Dengue virus were the only other known mosquito-transmitted flaviviruses in North America capable of causing human disease. This review will discuss the North American experience with mosquito-borne flavivirus prior to the arrival of West Nile virus, the entry and spread of West Nile virus in North America, effects on wild bird populations, genetic changes in the virus, and the current state of West Nile virus transmission.

Nile River Fluctuations Near Khartoum, Sudan

NASA Image and Video Library

2001-08-29

Throughout history, the rising and falling waters of the mighty Nile River have directly impacted the lives of the people who live along its banks. These images of the area around Sudan's capital city of Khartoum capture the river's dynamic nature. Acquired by the Multi-angle Imaging SpectroRadiometer's nadir (vertical-viewing) camera, they display the extent of the Nile waters before and after the onset of the rainy seasons of 2000 (top pair) and 2001 (bottom pair). The images are displayed in "false color," using the camera's near-infrared, green, and blue bands. With this particular spectral combination, water appears in shades of blue and turquoise, and highly vegetated areas show up as bright red. Originating in Uganda and Ethiopia, respectively, the waters of the White Nile (western branch) and Blue Nile (eastern branch) converge at Khartoum (about half-way between image center and the left-hand side), and continue to flow northward as the Great Nile. Although the most obvious feature in these images is the increased width of the White Nile between spring and summer, careful inspection shows that the Great Nile is at its widest in August 2001 (note in particular the area between the clouds near the top of this panel). Heavy rains in the Blue Nile catchment area of the Ethiopian highlands led to a rapid overflow of the river's floodwaters into the main stream of the Great Nile, leading to extensive flooding, the worst effects of which occurred north of Khartoum. According to the Food and Agriculture Organization of the United Nations, tens of thousands of people have fled their homes, and the number of people in need of urgent food assistance in Sudan, estimated at three million earlier in the year, was likely to increase with the onset of these floods. South of the confluence of the White Nile and the Blue Nile, the area of a cross-hatched appearance is the irrigated plain of El Gezira. The Gezira irrigation scheme uses water from the Makwar Dam (now called

Inverse-dispersion technique for assessing lagoon gas emissions

USDA-ARS?s Scientific Manuscript database

Measuring gas emissions from treatment lagoons and storage ponds poses challenging conditions for existing micrometeorological techniques because of non-ideal wind conditions, such as those induced by trees and crops surrounding the lagoons, and lagoons with dimensions too small to establish equilib...

The White Nile sedimentary system

NASA Astrophysics Data System (ADS)

Garzanti, Eduardo; Andò, Sergio; Padoan, Marta; Resentini, Alberto; Vezzoli, Giovanni; Villa, Igor

2014-05-01

The Nile River flows for ~6700 km from south of the Equator to finally reach the Mediterranean Sea at northern subtropical latitudes (Woodward et al. 2007). This is the longest sedimentological laboratory on Earth, a unique setting in which we are investigating changes in sediment composition associated with diverse chemical and physical processes, including weathering and hydraulic sorting. The present study focuses on the southern branch of the Nile across 20° of latitude, from hyperhumid Burundi and Rwanda highlands in central Africa to Khartoum, the capital city of Sudan at the southern edge of the Sahara. Our study of the Kagera basin emphasizes the importance of weathering in soils at the source rather than during stepwise transport, and shows that the transformation of parent rocks into quartzose sand may be completed in one sedimentary cycle (Garzanti et al. 2013a). Micas and heavy minerals, less effectively diluted by recycling than main framework components, offer the best key to identify the original source-rock imprint. The different behaviour of chemical indices such as the CIA (a truer indicator of weathering) and the WIP (markedly affected by quartz dilution) helps us to distinguish strongly weathered first-cycle versus polycyclic quartz sands (Garzanti et al. 2013b). Because sediment is efficiently trapped in East African Rift lakes, the composition of Nile sediments changes repeatedly northwards across Uganda. Downstream of both Lake Kyoga and Lake Albert, quartzose sands are progressively enriched in metamorphiclastic detritus supplied from tributaries draining amphibolite-facies basements. The evolution of White Nile sediments across South Sudan, a scarcely accessible region that suffered decades of civil war, was inferred from the available information (Shukri 1950), integrated by original petrographic, heavy-mineral and geochemical data (Padoan et al. 2011). Mineralogical and isotopic signatures of Bahr-el-Jebel and Sobat sediments, derived

Mercury Concentrations in Coastal Sediment from Younger Lagoon, Central California

NASA Astrophysics Data System (ADS)

Hohn, R. A.; Ganguli, P. M.; Swarzenski, P. W.; Richardson, C. M.; Merckling, J.; Johnson, C.; Flegal, A. R.

2013-12-01

Younger Lagoon Reserve, located in northern Monterey Bay, is one of the few relatively undisturbed wetlands that remain along the Central Coast of California. This lagoon system provides protected habitat for more than 100 bird species and for populations of fish, mammals, and invertebrates. Total mercury (HgT) concentrations in water within Younger Lagoon appear to vary with rainfall conditions and range from about 5-15 pM. These concentrations are similar to HgT in water from six nearby lagoon systems. However, Younger Lagoon contains elevated concentrations of dissolved organic carbon (~1 mM) and monomethylmercury (MMHg, ~1 pM) relative to our comparison lagoon sites (DOC < 0.5 mM and MMHg < 0.5 pM). We attribute Younger Lagoon's high DOC and MMHg to its restricted connection to the ocean and minor riverine contribution. Coastal lagoons in this region typically form at the mouth of streams. They behave as small estuaries during the wet season when surface water discharge keeps the mouth of the stream open to the ocean, and then transition into lagoons in the dry season when a sand berm develops and effectively cuts off surface water exchange. At Younger Lagoon, the sand berm remains intact throughout the year, breaching only during particularly high tides or intense rain events. Therefore, the lagoon's connection to nearshore seawater is primarily via surface water - groundwater interaction through the sand berm. Because Younger Lagoon is largely isolated from a surface water connection with the ocean, runoff from upgradient urban and agricultural land has an enhanced impact on water (and presumably sediment) quality. As a result, the lagoon is eutrophic and experiences annual algal blooms. Groundwater surveys suggest surface water, groundwater, and coastal seawater are hydraulically connected at Younger Lagoon, and mixing among these water masses appears to influence water geochemistry. To date, no chemical analyses have been conducted on sediment from Younger

West Nile Virus: Symptoms and Treatment

MedlinePlus

... U V W X Y Z # West Nile virus Note: Javascript is disabled or is not supported ... visit this page: About CDC.gov . West Nile Virus Home Prevention Prevención y control Symptoms, Diagnosis, & Treatment ...

Facultative Lagoons. Student Manual. Biological Treatment Process Control.

ERIC Educational Resources Information Center

Andersen, Lorri

The textual material for a unit on facultative lagoons is presented in this student manual. Topic areas discussed include: (1) loading; (2) microbial theory; (3) structure and design; (4) process control; (5) lagoon start-up; (6) data handling and analysis; (7) lagoon maintenance (considering visual observations, pond structure, safety, odor,…

Santa Margarita Lagoon Water Quality Monitoring Data

DTIC Science & Technology

2012-08-01

sits entirely within the boundaries of Marine Corps Base Camp Pendleton. It forms up where the Santa Margarita River meets the Pacific Ocean just north...of Oceanside, California. The western boundary of the lagoon is the beach berm that borders the ocean . The estuarine lagoon is usually open to the... ocean through a limited section of berm, although there are occasions when the lagoon is effectively closed to exchange with the ocean . The eastern

Spectroscopic analyses of soil samples outside Nile Delta of Egypt

NASA Astrophysics Data System (ADS)

Fakhry, Ahmed; Osman, Osama; Ezzat, Hend; Ibrahim, Medhat

2016-11-01

Soil in Egypt, especially around Delta is exposed to various pollutants which are affecting adversely soil fertility and stability. Humic Acids (HA) as a main part of soil organic matter (SOM) represent the heart of the interaction process of inorganic pollutants with soil. Consequently, Fourier transform infrared spectroscopy (FTIR) and Nuclear magnetic resonances (NMR) were used to characterize soil, sediment and extracted HA. Resulting data confirmed that the HA was responsible for transporting inorganic pollutants from surface to subsurface reaching the ground water, which may represent a high risk on public health. The transport process is coming as carboxyl in surface soil changed into metal carboxylate then transferred into the carboxyl in bottom soil.

N Isotopes in Nile Sediments (ethiopia, Sudan)

NASA Astrophysics Data System (ADS)

Padoan, M.; Villa, I. M.; Garzanti, E.; Galbusera, M.; Quistini, S.; Peruta, L.; El Kammar, A.

2009-04-01

The Nile is the most important river of the Eastern Mediterranean. Its water and sediment fluxes have greatly influenced marine circulation throughout the Quaternary, and are widely considered as possible causes for stagnation and formation of sapropel (Krom et al., 1999a; 2002; Talbot et al., 2000; Freydier et al., 2001; Weldeab et al., 2002; Scrivner et al., 2004). Variations in annual flooding and baseflow of the river Nile, controlled by climate changes, had major impact on the rise and demise of Egyptian dynasties (Stanley et al., 2003). In order to better define sedimentary sources of the Nile system and to obtain more robust results, we have analyzed Nd isotopes in sediments of all its major Sudanese and Ethiopian tributaries (Atbara, Gash, Abay, Didesa, Dabus, White Nile, Bahr Ez Zeraf) in several replicate samples. Analyses were carried out on distinct mud and sand fractions (<40 microns and 125-180 microns) of 30 samples, and systematic changes related to grain size and hydraulic-sorting processes could thus be investigated. On the same samples, companion studies are being carried out on Sr isotopes (Padoan et al., 2007) and on Pb isotopes at the Geological Survey of Israel (Harlavan et al., in preparation). Overall, isotopic signals are markedly different between the White Nile system, derived from largely Archean to Paleoproterozoic basement rocks, and Ethiopian tributaries, derived in diverse proportions from largely Neoproterozoic rift-shoulder basements and overlying Oligocene flood basalts. Isotopic signals of Main Nile sediments downstream of the Atbara confluence are close to those of Blue Nile sediments, indicating that detritus is mainly provided by the latter (Garzanti et al., 2006). In the White Nile branch, the 143Nd/144Nd ratio of the mud fraction is lower in the Bahr Ez Zeraf (0.51167) than in the White Nile downstrean of the Sobat confluence (0.51219), revealing significant sediment influx from the latter. In Blue Nile and Atbara branches

Nile damming as plausible cause of extinction and drop in abundance of deep-sea shrimp in the western Mediterranean over broad spatial scales

NASA Astrophysics Data System (ADS)

Cartes, J. E.; Maynou, F.; Fanelli, E.

2011-11-01

Greatly increased retention of flow in Nile River reservoirs was initiated in 1964, after completion of the Aswan High Dam, which induced important oceanographic changes in the Mediterranean Sea, including deep waters (below a depth of 150 m). Based on an analysis of data series starting in the 1940s/1950s, the giant red shrimp Aristaeomorpha foliacea has become locally extinct off of the Catalonian coasts (and elsewhere in the northwestern Mediterranean) at depths of 400-900 m, with a simultaneous and significant drop in the catches of red shrimp, Aristeus antennatus, in the second half of the 1960s. The extinction and sharp decline of deep-shrimp populations off Catalonian coast (at ca. 3200 km westwards from Nile Delta) followed the 1964 drop in Nile discharge with a delay of ca. 3-5 yrs (breakpoint analysis applied to data series). The breakpoints detected in the second half of 1960s both in Nile runoff and shrimps’ abundance were independent of climatic events in the study area (e.g. changes in NAO) and occurred before the increase in fishing effort off Catalonian coasts (breakpoint in 1973-1974). The Levantine Intermediate Water (LIW), inhabited by A. foliacea in the western Basin, had significant temperature (T) and salinity (S) increases in the 1950-1970 period, and Nile damming has contributed about 45% of the total S increase of Western Mediterranean deep-water masses from the 1960s to the late 1990s (Skliris and Lascaratos, 2004). This had to increase, for instance, LIW salinity at its formation site in the eastern Mediterranean. Nile damming was probably a triggering factor for the extinction/drop in abundance of deep-sea shrimp off Catalonian coasts.

West nile poliomyelitis in a 7-year-old child.

PubMed

Hainline, Margaret L; Kincaid, John C; Carpenter, Denise L; Golomb, Meredith R

2008-11-01

West Nile poliomyelitis is a well-described neurologic manifestation of West Nile viral infection in adults. However, few reports have described this manifestation in children infected with West Nile virus. We describe a 7-year-old boy who developed West Nile poliomyelitis with flaccid paralysis of his left leg. Electrodiagnostic testing and radiologic imaging confirmed anterior horn cell injury. We report on his course clinically and electrodiagnostically over 20 months.

Trace elements and carbon and nitrogen stable isotopes in organisms from a tropical coastal lagoon.

PubMed

Pereira, A A; van Hattum, B; de Boer, J; van Bodegom, P M; Rezende, C E; Salomons, W

2010-10-01

Trace elements (Fe, Mn, Al, Zn, Cr, Cu, Ni, Pb, Cd, Hg, and As) and stable isotope ratios (delta(13)C and delta(15)N) were analyzed in sediments, invertebrates, and fishes from a tropical coastal lagoon influenced by iron ore mining and processing activities to assess the differences in trace element accumulation patterns among species and to investigate relations with trophic levels of the organisms involved. Overall significant negative relations between trophic level (given by (15)N) and trace element concentrations in gastropods and crustaceans showed differences in internal controls of trace element accumulation among the species of different trophic positions, leading to trace element dilution. Generally, no significant relation between delta(15)N and trace element concentrations was observed among fish species, probably due to omnivory in a number of species as well as fast growth. Trace element accumulation was observed in the fish tissues, with higher levels of most trace elements found in liver compared with muscle and gill. Levels of Fe, Mn, Al, and Hg in invertebrates, and Fe and Cu in fish livers, were comparable with levels in organisms and tissues from other contaminated areas. Trace element levels in fish muscle were below the international safety baseline standards for human consumption.

Scottish saline lagoons: Impacts and challenges of climate change

NASA Astrophysics Data System (ADS)

Angus, Stewart

2017-11-01

The majority of Scotland's saline lagoons are located on the low-lying coastlines of the Western Isles and the northern archipelagos of Orkney and Shetland, where recorded annual relative sea level rise rates are among the highest in Scotland. The sediment-impounded lagoons of Orkney and Shetland will either lose their impoundment and become incorporated in marine coastal waters, or become increasingly saline, as relative sea levels rise. The rock-basin lagoons of the Western Isles will retain their restricted exchange with the sea but will also become more saline with rising sea level. Specialist lagoonal organisms tend to have wide salinity tolerances but may succumb to competition from marine counterparts. In all areas, there are sufficient fresh-water inland water bodies with potential to be captured as lagoons to compensate for loss of extent and number, but the specialist lagoon biota tend to have limited dispersal powers. It is thus possible that they will be unable to transfer to their analogue sites before existing lagoons become fully marine, giving conservation managers the problem of deciding on management options: leave natural processes to operate without interference, manage the saline inflow to maintain the current salinity regime, or translocate lagoon organisms perceived as threatened by rising salinities. Timing of conversion and capture is unpredictable due to local topography and complications caused by variable stratification.

West Nile Virus Infection in Sheep.

PubMed

Rimoldi, G; Mete, A; Adaska, J M; Anderson, M L; Symmes, K P; Diab, S

2017-01-01

West Nile virus (WNV) infection has been detected in many species of birds and mammals, but scant information is available about the disease in small ruminants. West Nile virus was diagnosed in 6 sheep with neurological signs and encephalitis, in California between 2002 and 2014. All sheep had severe lymphoplasmacytic meningoencephalitis. Lymphoplasmacytic myelitis was also detected in 2 sheep where the spinal cord was examined. Brain tissue was positive for WNV detected by polymerase chain reaction in 6 of 6 sheep and by immunohistochemistry (IHC) in 5 of 6 sheep. Viral antigen was not detected by IHC in extraneural tissues in the 3 sheep examined. West Nile virus RNA was sequenced from 2 of 6 sheep, and each one clusters closely with WNV isolated from mosquito pools from nearby locations at similar times. West Nile virus was the most common cause of viral encephalitis in sheep diagnosed at this laboratory between 2002 and 2014, accounting for 6 of 9 sheep.

Nutrient-Chlorophyll Relationships in the Indian River Lagoon, Florida

EPA Science Inventory

The Indian River Lagoon is a highly diverse estuary located along Florida’s Atlantic coast. The system is made up of the main stem and two side-lagoons: the Banana River and Mosquito Lagoon. We segmented the main stem into three sections based on spatial trends in water quality ...

Control Over the Nile: Implications across Nations

DTIC Science & Technology

2010-06-01

states is evident in the 1959 Full Utilization of the Nile Waters Agreement between Egypt and the Sudan. Of the Nile’s annual average water yield of...grain, maize —has been falling. Kenya saw a 22 per cent decrease in 2000 from the 1998 harvest and a 36 per cent decrease from the 1999 harvest—leading...incorporated in a Nile water resource-sharing regime. The potential for Nile basin conflict or cooperation revolves around, first, the gap between water

Reactivation West Nile virus infection-related chorioretinitis.

PubMed

Beardsley, Robert; McCannel, Colin

2012-01-01

West Nile Virus is a relatively uncommon infection that can involve retinal and choroidal inflammation leading to photopsias, photophobia, and orbital pain. The diagnosis is made by clinical history, serology, and characteristic funduscopic exam and fluorescein angiography findings. Treatment involves primarily supportive care as there are no known effective anti-viral agents. Visual recovery is usually full. Here we present a case of West Nile Virus Infection Related chorioretinitis that demonstrated active linear chorioretinal lesions approximately one year after the initial infection was diagnosed and treated. The patient noted new onset blurry vision and floaters for two weeks prior to presentation. Antibody titers to West Nile Virus increased from baseline levels indicating active infection. This represents the first case of reactivation West Nile Virus Infection Related chorioretinitis that has been documented.

Benthic ecology of tropical coastal lagoons: Environmental changes over the last decades in the Términos Lagoon, Mexico

NASA Astrophysics Data System (ADS)

Grenz, Christian; Fichez, Renaud; Silva, Carlos Álvarez; Benítez, Laura Calva; Conan, Pascal; Esparza, Adolfo Contreras Ruiz; Denis, Lionel; Ruiz, Silvia Díaz; Douillet, Pascal; Martinez, Margarita E. Gallegos; Ghiglione, Jean-François; Mendieta, Francisco José Gutiérrez; Origel-Moreno, Montserrat; Garcia, Antonio Zoilo Marquez; Caravaca, Alain Muñoz; Pujo-Pay, Mireille; Alvarado, Rocío Torres; Zavala-Hidalgo, Jorge

2017-10-01

The Términos Lagoon is a 2000-km2 wide coastal lagoon linked to the largest river catchment in Mesoamerica. Economic development, together with its ecological importance, led the Mexican government to pronounce the Términos Lagoon and its surrounding wetlands as a Federal protected area for flora and fauna in 1994. It is characterized by small temperature fluctuations, but with two distinct seasons (wet and dry) that control the biological, geochemical, and physical processes and components. This paper presents a review of the available information about the Términos Lagoon. The review shows that the diversity of benthic communities is structured by the balance between marine and riverine inputs and that this structuration strongly influences the benthic metabolism and its coupling with the biogeochemistry of the water column. The paper also presents many specific drivers and recommendations for a long-term environmental survey strategy in the context of the expected Global Change in the Central American region.

Both riverine detritus and dissolved nutrients drive lagoon fisheries

NASA Astrophysics Data System (ADS)

Bonthu, Subbareddy; Ganguly, Dipnarayan; Ramachandran, Purvaja; Ramachandran, Ramesh; Pattnaik, Ajit K.; Wolanski, Eric

2016-12-01

The net ecosystem metabolism in lagoons has often been estimated from the net budget of dissolved nutrients. Such is the case of the LOICZ estuarine biogeochemistry nutrient budget model that considers riverine dissolved nutrients, but not riverine detritus. However the neglect of detritus can lead to inconsistencies; for instance, it results in an estimate of 5-10 times more seaward export of nutrients than there is import from rivers in Chilika Lagoon, India. To resolve that discrepancy the UNESCO estuarine ecohydrology model, that considers both dissolved nutrients and detritus, was used and, for Chilika Lagoon, it reproduced successfully the spatial distribution of salinity, dissolved nutrients, phytoplankton and zooplankton as well as the fish yield data. Thus the model suggests that the riverine input of both detritus and dissolved nutrients supports the pelagic food web. The model also reproduces well the observation of decreased fish yield when the mouth of the lagoon was choked in the 1990s, demonstrating the importance of the physics that determine the flushing rate of waterborne matter. Thus, both farming in the watershed by driving the nutrient and detritus inputs to the lagoon, and dredging and engineering management of the mouth by controlling the flushing rate of the lagoon, have a major influence on fish stocks in the lagoon.

Nile Delta

Atmospheric Science Data Center

2013-04-16

... civilizations since ancient times. It has also been an important transportation waterway, although in the twentieth century that role ... NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Science Mission Directorate, Washington, D.C. The Terra spacecraft is managed ...

21 CFR 866.3940 - West Nile virus serological reagents.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 21 Food and Drugs 8 2011-04-01 2011-04-01 false West Nile virus serological reagents. 866.3940... virus serological reagents. (a) Identification. West Nile virus serological reagents are devices that consist of antigens and antisera for the detection of anti-West Nile virus IgM antibodies, in human serum...

21 CFR 866.3940 - West Nile virus serological reagents.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 8 2010-04-01 2010-04-01 false West Nile virus serological reagents. 866.3940... virus serological reagents. (a) Identification. West Nile virus serological reagents are devices that consist of antigens and antisera for the detection of anti-West Nile virus IgM antibodies, in human serum...

21 CFR 866.3940 - West Nile virus serological reagents.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 8 2013-04-01 2013-04-01 false West Nile virus serological reagents. 866.3940... virus serological reagents. (a) Identification. West Nile virus serological reagents are devices that consist of antigens and antisera for the detection of anti-West Nile virus IgM antibodies, in human serum...

21 CFR 866.3940 - West Nile virus serological reagents.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 8 2014-04-01 2014-04-01 false West Nile virus serological reagents. 866.3940... virus serological reagents. (a) Identification. West Nile virus serological reagents are devices that consist of antigens and antisera for the detection of anti-West Nile virus IgM antibodies, in human serum...

21 CFR 866.3940 - West Nile virus serological reagents.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 8 2012-04-01 2012-04-01 false West Nile virus serological reagents. 866.3940... virus serological reagents. (a) Identification. West Nile virus serological reagents are devices that consist of antigens and antisera for the detection of anti-West Nile virus IgM antibodies, in human serum...

Cairo, Egypt as seen from STS-62

NASA Image and Video Library

1994-03-05

STS062-108-058 (4-18 March 1994) --- Cairo lies at the apex of the great delta of the Nile: the delta is marked by the strong greens of cultivated lands, Cairo by the gray sprawl along the river and the eastern delta apex as it develops in the direction of the airports and Suez. The city of El Giza lies on the west side of the Nile with the Giza pyramids in the desert just beyond the cultivated lands. Several major canals lead water to parts of the delta more distant from the Nile; generally these can be recognized as straighter, more engineered waterways. Towards the top left, the bifurcation of the Rosetta and Damietta branches of the Nile can be seen. These are the two major present-day veins of the Nile as it approaches the Mediterranean.

Nutrient removal from swine lagoon effluent by duckweed

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bergmann, B.A.; Cheng, J.; Classen, J.

2000-04-01

Three duckweed geographic isolates were grown on varying concentrations of swine lagoon effluent in a greenhouse to determine their ability to remove nutrients from the effluent. Duckweed biomass was harvested every other day over a 12-day period. Duckweed biomass production, nutrient loss from the swine lagoon effluent, and nutrient content of duckweed biomass were used to identify effluent concentrations/geographic isolate combinations that are effective in terms of nutrient utilization from swine lagoon effluent and production of healthy duckweed biomass. When Lemna minor geographic isolate 8627 was grown on 50% swine lagoon effluent, respective losses of TKN, NH{sub 3}-N, TP, OPO{submore » 4}-P, TOC, K, Cu, and Zn were 83, 100, 49, 31, 68, 21, 28 and 67%.« less

Accuracy of lagoon gas emissions using an inverse dispersion method

USDA-ARS?s Scientific Manuscript database

Measuring gas emissions from treatment lagoons and storage ponds poses challenging conditions for existing micrometeorological techniques because of non-ideal wind conditions. These include those induced by trees and crops surrounding the lagoons, and lagoons with dimensions too small to establish ...

Mosquito Lagoon environmental resources inventory

NASA Technical Reports Server (NTRS)

Provancha, Jane A.; Hall, Carlton R.; Oddy, Donna M.

1992-01-01

This document provides a synopsis of biotic and abiotic data collected in the Mosquito Lagoon area in relation to water quality. A holistic ecological approach was used in this review to allow for summaries of climate, land use, vegetation, geohydrology, water quality, fishes, sea turtles, wading birds, marine mammals, invertebrates, shellfish, and mosquito control. The document includes a bibliographic database list of 157 citations that have references to the Mosquito Lagoon, many of which were utilized in development of the text.

Sediment budget in the Lagoon of Venice, Italy

NASA Astrophysics Data System (ADS)

Sarretta, A.; Pillon, S.; Molinaroli, E.; Guerzoni, S.; Fontolan, G.

2010-05-01

A comparison of 1927, 1970 and 2002 bathymetric surveys in the Lagoon of Venice was used to reconstruct historical changes in sedimentation. A detailed GIS-based analysis of the charts revealed the timing and pattern of geomorphic changes and allowed calculation of sediment deposition and erosion for the entire lagoon and each of its four sub-basins: Treporti, Lido, Malamocco and Chioggia. Two main developments are discernible from comparative observation of the areal distribution of the main elevation ranges: the diminution in area of the saltmarshes, which decreased by more than 50%, from 68 km 2 in 1927 to 32 km 2 in 2002, and the progressive deepening of the lagoon, with a huge increase in the area of subtidal flats (between -0.75 and -2.00 m depth), from 88 to 206 km 2 during the same period. Generally, the lagoon showed a clear-cut change in the most frequent depths (modal depth) from a value of -0.62 m in 1927 to -0.88 m in 2002. The deepening of the lagoon affected mostly the lagoonal sub-basins south of the town of Venice, where modal depth increased from -0.65 to -1.12 m in Lido, from -0.64 to -1.75 m in Malamocco and from -0.39 to -0.88 m in Chioggia. Large changes in lagoonal morphology were caused by human-induced subsidence, the dredging of navigation channels between 1927 and 1970, and intense natural erosion enhanced by sediment re-suspension due to Manila clam fishing between 1970 and 2002. There was a net loss of about 110 Mm 3 of sediment from the lagoon, most of which (73 Mm 3, ca.70%) was in the earlier period. A significant amount was lost by dredging and direct disposal outside the system, either on land or at sea, and there was a net loss of 39 Mm 3 from the lagoon to the sea through the inlets, at an annual rate of 0.5 Mm 3. Comparison of erosion rates in the two periods revealed an alarming acceleration, from a net sediment loss of 0.3 Mm 3 yr -1 in the period 1927-1970 to 0.8 Mm 3 yr -1 in 1970-2002. Deterioration caused a shift from a

Metagenomes of Mediterranean Coastal Lagoons

PubMed Central

Ghai, Rohit; Hernandez, Claudia Mella; Picazo, Antonio; Mizuno, Carolina Megumi; Ininbergs, Karolina; Díez, Beatriz; Valas, Ruben; DuPont, Christopher L.; McMahon, Katherine D.; Camacho, Antonio; Rodriguez-Valera, Francisco

2012-01-01

Coastal lagoons, both hypersaline and freshwater, are common, but still understudied ecosystems. We describe, for the first time, using high throughput sequencing, the extant microbiota of two large and representative Mediterranean coastal lagoons, the hypersaline Mar Menor, and the freshwater Albufera de Valencia, both located on the south eastern coast of Spain. We show there are considerable differences in the microbiota of both lagoons, in comparison to other marine and freshwater habitats. Importantly, a novel uncultured sulfur oxidizing Alphaproteobacteria was found to dominate bacterioplankton in the hypersaline Mar Menor. Also, in the latter prokaryotic cyanobacteria were almost exclusively comprised by Synechococcus and no Prochlorococcus was found. Remarkably, the microbial community in the freshwaters of the hypertrophic Albufera was completely in contrast to known freshwater systems, in that there was a near absence of well known and cosmopolitan groups of ultramicrobacteria namely Low GC Actinobacteria and the LD12 lineage of Alphaproteobacteria. PMID:22778901

Benthic Primary Production Budget of a Caribbean Reef Lagoon (Puerto Morelos, Mexico)

PubMed Central

Naumann, Malik S.; Jantzen, Carin; Haas, Andreas F.; Iglesias-Prieto, Roberto; Wild, Christian

2013-01-01

High photosynthetic benthic primary production (P) represents a key ecosystem service provided by tropical coral reef systems. However, benthic P budgets of specific ecosystem compartments such as macrophyte-dominated reef lagoons are still scarce. To address this, we quantified individual and lagoon-wide net (Pn) and gross (Pg) primary production by all dominant functional groups of benthic primary producers in a typical macrophyte-dominated Caribbean reef lagoon near Puerto Morelos (Mexico) via measurement of O2 fluxes in incubation experiments. The photosynthetically active 3D lagoon surface area was quantified using conversion factors to allow extrapolation to lagoon-wide P budgets. Findings revealed that lagoon 2D benthic cover was primarily composed of sand-associated microphytobenthos (40%), seagrasses (29%) and macroalgae (27%), while seagrasses dominated the lagoon 3D surface area (84%). Individual Pg was highest for macroalgae and scleractinian corals (87 and 86 mmol O2 m−2 specimen area d−1, respectively), however seagrasses contributed highest (59%) to the lagoon-wide Pg. Macroalgae exhibited highest individual Pn rates, but seagrasses generated the largest fraction (51%) of lagoon-wide Pn. Individual R was highest for scleractinian corals and macroalgae, whereas seagrasses again provided the major lagoon-wide share (68%). These findings characterise the investigated lagoon as a net autotrophic coral reef ecosystem compartment revealing similar P compared to other macrophyte-dominated coastal environments such as seagrass meadows and macroalgae beds. Further, high lagoon-wide P (Pg: 488 and Pn: 181 mmol O2 m−2 lagoon area d−1) and overall Pg:R (1.6) indicate substantial benthic excess production within the Puerto Morelos reef lagoon and suggest the export of newly synthesised organic matter to surrounding ecosystems. PMID:24367570

Lockport Sewage Lagoon.

ERIC Educational Resources Information Center

Perry, John

1995-01-01

Describes a student initiated stewardship project that resulted in the transformation of a sewage lagoon near the school into a place to study nature. Contains a list of 20 things that discourage a successful stewardship project. (LZ)

Polychlorinated Biphenyls Water Pollution along the River Nile, Egypt

PubMed Central

Megahed, Ayman Mohamed; Dahshan, Hesham; Abd-El-Kader, Mahdy A.; Abd-Elall, Amr Mohamed Mohamed; Elbana, Mariam Hassan; Nabawy, Ehab; Mahmoud, Hend A.

2015-01-01

Ten polychlorinated biphenyl (PCB) congeners were determined in water samples collected along the River Nile using gas chromatography-electron capture detector (GC-ECD). PCB concentrations ranged from 14 to 20 μg/L, which were higher than those reported in previous studies, indicating serious PCB pollution in the River Nile. PCB congener profiles varied depending on the sampling sties. PCB-138 was the predominant congener accounting for more than 18% of total PCBs. The composition of PCB congeners in the water revealed that highly chlorinated PCB technical mixtures such as Aroclor 1254 was the main PCB production historically used in Egypt. An increasing trend in PCB levels from the upper stream to the Nile estuaries was observed. The calculated flux of PCBs indicated that 6.8 tons of PCBs is dumped into the Mediterranean Sea each year from the River Nile. The hazard quotients and carcinogenic risk caused by PCB pollution in the River Nile were above the acceptable level indicating that PCBs in the River Nile water pose adverse health effects for all age groups. Our findings revealed that PCBs possess a serious risk to the Egyptian population that depends mainly on the River Nile as a source of water. Thus, stricter legislation and regulatory controls should be applied to reduce the risk of PCBs in Egypt. PMID:26798844

Nutrient-Chlorophyll Relationships in the Indian River Lagoon, Florida(SEERS)

EPA Science Inventory

The Indian River Lagoon is a highly diverse estuary located along Florida’s Atlantic coast. The system is made up of the main stem and two side-lagoons: the Banana River and Mosquito Lagoon. We segmented the main stem into three sections based on spatial trends in water quality ...

Hydrogen Sulfide Emissions from Sow Farm Lagoons across Climates Zones.

PubMed

Grant, Richard H; Boehm, Matthew T; Lawrence, Alfred J; Heber, Albert J

2013-11-01

Hydrogen sulfide (HS) emissions were measured periodically over the course of 2 yr at three sow waste lagoons representing humid mesothermal (North Carolina, NC), humid microthermal (Indiana, IN), and semiarid (Oklahoma, OK) climates. Emissions were determined using a backward Lagrangian stochastic model in conjunction with line-sampled HS concentrations and measured turbulence. The median annual sow-specific (area-specific) lagoon emissions at the OK farm were approximately 1.6 g head [hd] d (5880 µg m s), whereas those at the IN and NC sow farms were 0.035 g hd d (130 µg m s), and 0.041 g hd d (260 µg m s), respectively. Hydrogen sulfide emissions generally increased with wind speed. The daily HS emissions from the OK lagoon were greatest during the first half of the year and decreased as the year progressed. Emissions were episodic at the NC and IN lagoons. The generally low emissions at the NC and IN lagoons were probably a result of significant populations of purple sulfur bacteria maintained in the humid mesothermal and humid microthermal climates. Most of the large HS emission events at the NC and IN lagoons appeared to be a result of either precipitation events or liquid pump-out events. The high emissions at the OK lagoon in a semiarid climate were largely a result of high wind speeds enhancing both lagoon and air boundary layer mixing. The climate (air temperature, winds, and precipitation) appeared to influence the HS emissions from lagoons. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Enhanced emission of Nile Red on plasmonic platforms

NASA Astrophysics Data System (ADS)

Synak, Anna; Bojarski, Piotr; Grobelna, Beata; Gryczyński, Ignacy; Fudala, Rafał; Mońka, Michal

2018-04-01

Strongly enhanced fluorescence of Nile Red deposited in the vicinity of silver nanoparticles and gold semitransparent mirror was observed. The properties of three different plasmonic platforms based on TiO2, TiO2-GLYMO (1:1) and SiO2 matrices were studied with spectroscopic and microscopic techniques. Significant differences of Nile Red spectroscopic properties in both matrices were observed. In particular, the sensitivity of Nile Red fluorescence enhancement and its peak location to the polarity of local surrounding was found.

Seismic stratigraphy of barrier-island arc retreat paths in Mississippi River delta

DOE Office of Scientific and Technical Information (OSTI.GOV)

Penland, S.; Suter, J.R.

1983-09-01

The stratigraphic record preserved in the retreat path of Mississippi delta barrier-island arcs is controlled by erosional shoreface retreat processes, relative sea level rise, and sediment supply. More than 500 km (300 mi) of high resolution shallow seismic profiles correlated with vibracores from retreat paths fronting the Isles Dernieres and Chandeleur barrier-island arcs, show contrasting stratigraphic sequences preserved on the inner continental shelf (Mississippian delta). The Isles Dernieres barrier-island arc developed as a consequence of the Caillou Headland abandonment in the early Lafourche delta approximately 800 years B.P. On the lower shoreface, channels can be seen projecting seaward under themore » central part of the island arc; associated with it is a beach-ridge plain extending eastward. On the inner shelf, a sand sheet up to 60 cm (2 ft) thick marks the retreat path of the Isles Dernieres. The Chandeleur barrier-island arc was generated by abandonment of the St. Bernard delta complex 1,500 years ago. Scattered outcrops of shell reefs and lagoonal deposits occur on the lower shoreface. Beyond the shoreface, a 1 to 5 m (3 to 16 ft) thick sand sheet, caps tidal inlet scars up to 10 m (33 ft) thick, as well as the basal portions of migrating barrier-island sequences associated with earlier shoreline positions. Differences seen in the two stratigraphic sequences are a function of distributary size and depositional history of each barrier-island arc. The Isles Dernieres developed from a series of small sand-deficient distributaries in the Lafourche delta complex, whereas the Chandeleur Islands developed from large sand-rich distributaries of the St. Bernard delta complex.« less

Comparison of Prognostic and Diagnostic Approaches to Modeling Evapotranspiration in the Nile River Basin

NASA Astrophysics Data System (ADS)

Yilmaz, M.; Anderson, M. C.; Zaitchik, B. F.; Crow, W. T.; Hain, C.; Ozdogan, M.; Chun, J. A.

2012-12-01

may be a valuable model evaluation tool. Motivated by the complementary information that exists in prognostic and diagnostic energy balance modeling, as well as the need for evaluation of water consumption estimates over the Nile basin, the purpose of this study is to 1) better describe the conceptual differences between prognostic and diagnostic modeling, 2) present the potential for diagnostic models to capture important hydrologic features that are not explicitly represented in prognostic model, 3) explore the differences in these two approaches over the Nile Basin, where ground data are sparse and transnational data sharing is unreliable. More specifically, we will compare output from the Noah prognostic model and the Atmosphere-Land Exchange Inverse (ALEXI) diagnostic model generated over ground truth data-poor Nile basin. Preliminary results indicate spatially, temporally, and magnitude wise consistent flux estimates for ALEXI and NOAH over irrigated Delta region, while there are differences over river-fed wetlands.

Is the Venice Lagoon Noisy? First Passive Listening Monitoring of the Venice Lagoon: Possible Effects on the Typical Fish Community.

PubMed

Bolgan, Marta; Picciulin, Marta; Codarin, Antonio; Fiorin, Riccardo; Zucchetta, Matteo; Malavasi, Stefano

2016-01-01

Three passive listening surveys have been carried out in two of the three Venice lagoon tide inlets and inside the Venice island. The spectral content and the intensity level of the underwater noise as well as the presence or absence of Sciaena umbra and the distribution of its different sound patterns have been investigated in all the recording sites. The passive listening proved to be successful in detecting S. umbra drumming sounds in both Venice lagoon tide inlets. Our results indicate that the spectral content and the level of underwater noise pollution in the Venice lagoon could affect fish acoustic communication.

Environmental enhancement of swine lagoons through influent treatment

USDA-ARS?s Scientific Manuscript database

Confined swine production generates large volumes of wastewater typically stored and treated in anaerobic lagoons. Failure of these lagoons during tropical storms in North Carolina along with major public environmental concerns led to a permanent state moratorium of construction of new anaerobic lag...

Mercury methylation and demethylation in Hg-contaminated lagoon sediments (Marano and Grado Lagoon, Italy)

NASA Astrophysics Data System (ADS)

Hines, Mark E.; Poitras, Erin N.; Covelli, Stefano; Faganeli, Jadran; Emili, Andrea; Žižek, Suzana; Horvat, Milena

2012-11-01

Mercury (Hg) transformation activities and sulfate (SO42-) reduction were studied in sediments of the Marano and Grado Lagoons in the Northern Adriatic Sea region as part of the "MIRACLE" project. The lagoons, which are sites of clam (Tapes philippinarum) farming, have been receiving excess Hg from the Isonzo River for centuries. Marano Lagoon is also contaminated from a chlor-alkali plant. Radiotracer methods were used to measure mercury methylation (230Hg, 197Hg), methylmercury (MeHg) demethylation (14C-MeHg) and SO42- reduction (35S) in sediment cores collected in autumn, winter and summer. Mercury methylation rate constants ranged from near zero to 0.054 day-1, generally decreased with depth, and were highest in summer. Demethylation rate constants were much higher than methylation reaching values of ˜0.6 day-1 in summer. Demethylation occurred via the oxidative pathway, except in winter when the reductive pathway increased in importance in surficial sediments. Sulfate reduction was also most active in summer (up to 1600 nmol mL-1 day-1) and depth profiles reflected seasonally changing redox conditions near the surface. Methylation and demethylation rate constants correlated positively with SO42- reduction and pore-water Hg concentrations, and inversely with Hg sediment-water partition coefficients indicating the importance of SO42- reduction and Hg dissolution on Hg cycling. Hg transformation rates were calculated using rate constants and concentrations of Hg species. In laboratory experiments, methylation was inhibited by amendments of the SO42--reduction inhibitor molybdate and by nitrate. Lagoon sediments displayed a dynamic seasonal cycle in which Hg dissolution in spring/summer stimulated Hg methylation, which was followed by a net loss of MeHg in autumn from demethylation. Sulfate-reducing bacteria (SRB) tended to be responsible for methylation of Hg and the oxidative demethylation of MeHg. However, during winter in surficial sediments, iron

Submarine groundwater discharge into typical tropical lagoons: A case study in eastern Hainan Island, China

NASA Astrophysics Data System (ADS)

Wang, Xilong; Du, Jinzhou

2016-11-01

Assessing submarine groundwater discharge (SGD) into lagoons and bays can be helpful to understand biogeochemical processes, especially nutrient dynamics. In the present paper, radium (Ra) isotopes were used to quantify SGD in two typical tropical lagoons (Laoye Lagoon (LY Lagoon) and Xiaohai Lagoon (XH Lagoon)) of eastern Hainan Island, China. The Ra mass balance model provided evidence that SGD plays an important role in the hydrology of the LY Lagoon and the XH Lagoon, delivering average SGD fluxes of 1.7 × 106 (94 L m-2 d-1) and 1.8 × 106 (41 L m-2 d-1) m3 d-1, respectively. Tidal pumping was one of the important driving forces for SGD fluxes in the LY and the XH Lagoons. Tidal-driven SGD into the tidal channels of both lagoons can account for approximately 10% of the total SGD flux into the lagoons. In addition, the dissolved inorganic nutrient budgets were reassessed in the LY Lagoon and the XH Lagoon, which showed that SGD was the major source of nutrients entering the LY Lagoon and that the LY Lagoon behaved as a source for dissolved inorganic nitrogen (DIN) and dissolved inorganic phosphorus (DIP) and as a sink for dissolved silicate (DSi). Nutrient loads in the XH Lagoon were mainly derived from riverine inputs and SGD, and the XH Lagoon behaved as a source for DIP, but a sink for DIN and DSi.

West Nile Virus: Review of the Literature

PubMed Central

Petersen, Lyle R.; Brault, Aaron C.; Nasci, Roger S.

2015-01-01

IMPORTANCE Since its introduction in North America in 1999,West Nile virus has produced the 3 largest arboviral neuroinvasive disease outbreaks ever recorded in the United States. OBJECTIVE To review the ecology, virology, epidemiology, clinical characteristics, diagnosis, prevention, and control of West Nile virus, with an emphasis on North America. EVIDENCE REVIEW PubMed electronic database was searched through February 5, 2013. United States national surveillance data were gathered from the Centers for Disease Control and Prevention. FINDINGS West Nile virus is now endemic throughout the contiguous United States, with 16 196 human neuroinvasive disease cases and 1549 deaths reported since 1999. More than 780 000 illnesses have likely occurred. To date, incidence is highest in the Midwest from mid-July to early September. West Nile fever develops in approximately 25% of those infected, varies greatly in clinical severity, and symptoms may be prolonged. Neuroinvasive disease (meningitis, encephalitis, acute flaccid paralysis) develops in less than 1% but carries a fatality rate of approximately 10%. Encephalitis has a highly variable clinical course but often is associated with considerable long-term morbidity. Approximately two-thirds of those with paralysis remain with significant weakness in affected limbs. Diagnosis usually rests on detection of IgM antibody in serum or cerebrospinal fluid. Treatment is supportive; no licensed human vaccine exists. Prevention uses an integrated pest management approach, which focuses on surveillance, elimination of mosquito breeding sites, and larval and adult mosquito management using pesticides to keep mosquito populations low. During outbreaks or impending outbreaks, emphasis shifts to aggressive adult mosquito control to reduce the abundance of infected, biting mosquitoes. Pesticide exposure and adverse human health events following adult mosquito control operations for West Nile virus appear negligible. CONCLUSIONS AND

Does the Nile reflect solar variability?

NASA Astrophysics Data System (ADS)

Ruzmaikin, Alexander; Feynman, Joan; Yung, Yuk

Historical records of the Nile water level provide a unique opportunity to investigate the possibility that solar variability influences the Earth's climate. Particularly important are the annual records of the water level, which are uninterrupted for the years 622-1470 A.D. These records are non-stationary, so that standard spectral analyses cannot adequately characterize them. Here the Empirical Mode Decomposition technique, which is designed to deal with non-stationary, nonlinear time series, becomes useful. It allows the identification of two characteristic time scales in the water level data that can be linked to solar variability: the 88 year period and a time scale of about 200 years. These time scales are also present in the concurrent aurora data. Auroras are driven by coronal mass ejections and the rate of auroras is an excellent proxy for solar variabiliy. Analysis of auroral data contemporaneous with the Nile data shows peaks at 88 years and about 200 years. This suggests a physical link between solar variability and the low-frequency variations of the Nile water level. The link involves the influence of solar variability on the North Annual Mode of atmospheric variability and its North Atlantic and Indian Oceans patterns that affect rainfall over Eastren Equatorial Africa where the Nile originates.

Impacts of West Nile Virus on wildlife

USGS Publications Warehouse

Saito, E.K.; Wild, M.A.

2004-01-01

The recent epidemic of West Nile virus in the United States proved to be unexpectedly active and was the largest epidemic of the virus ever recorded. Much remains to be discovered about the ecology and epidemiology of West Nile virus in the United States, including which species are important in maintaining the virus in nature, why some species are more susceptible to lethal infection, and what environmental factors are important in predicting future epidemics. These factors will likely vary regionally, depending on local ecological characteristics. Until scientists better understand the virus and factors influencing its activity, predicting its effects for future seasons is impossible. However, experts are certain about one thing: West Nile virus is here to stay.

Biochemical properties of the nerve growth factor-inducible large external (NILE) glycoprotein.

PubMed

Salton, S R; Shelanski, M L; Greene, L A

1983-12-01

In the presence of nerve growth factor (NGF), PC12 pheochromocytoma cells undergo neuronal differentiation with a concomitant 3- to 5-fold increase in the specific level of an Mr = 230,000 cell surface component named the NGF-inducible large external, or NILE, glycoprotein. Antisera raised against NILE glycoprotein (NILE GP) purified from PC12 cells have been found to recognize most, if not all, neurons derived from the peripheral and central nervous systems. In the current studies several of the biochemical properties of NILE GP were investigated. NILE GP was found to be phosphorylated in NGF-treated and -untreated PC12 cells and in cultured rat sympathetic neurons. The phosphate moiety of NILE GP is almost completely alkali labile, suggesting that phosphoserine groups predominate. Immunoprecipitation experiments revealed that incorporation of [32P]phosphate into NILE GP relative to total PC12 cell phosphoprotein was not significantly altered at 12 and 24 hr of NGF treatment but was enhanced 3-fold after 7 days and up to 5-fold after 2 to 3 weeks of NGF exposure. These changes in phosphorylated NILE GP paralleled, and therefore appeared to be mainly a consequence of, the NGF-induced increase in total cellular levels of NILE GP. By two-dimensional gel analysis, anti-NILE GP selectively immunoprecipitated two NGF-inducible spots (apparent Mr = 230,000; pI = 6.4 to 6.6) from PC12 cells labeled with either [3H] fucose, [35S]methionine, or [32P]phosphate. Anti-NILE GP immunoprecipitated a single band (apparent Mr = 205,000) from extracts of rat brain labeled with [3H] glucosamine. This confirms the previously established apparent molecular weight difference between central and peripheral NILE GP cross-reactive material. When PC12 cells, cerebellar cultures, and cultured cerebral cortex were treated with tunicamycin and labeled with [35S]methionine, nonglycosylated bands each with Mr = 160,000 were immunoprecipitated, implying that the differences in the mobilities on

Initial crop growth in soil collected from a closed animal waste lagoon.

PubMed

Zhu, L; Kirkham, M B

2003-03-01

In the 21st century, remediation of the soil beneath animal waste lagoons will become an important issue, as they are closed due to environmental regulations or to abandonment. The possibility of growing crops in the soil, which has high concentrations of ammonium-N, has not been studied. The objective of this experiment was to determine if crop species would germinate and grow in lagoon soil. Soil was gathered from a lagoon that had received wastes from swine (Sus scrofa) and beef (Bos taurus) since 1968. Eight crops were grown in greenhouse pots containing the lagoon soil: winter barley (Hordeum vulgare L. 'Weskan'); field corn (Zea mays L., Cargill's hybrid 7997); 'Plainsman' winter rapeseed [Brassica napus L. spp. oleifera (Metzg.) Sinsk. f. biennis]; soybean [Glycine max (L.) Merr. 'KS 4694'); forage sorghum [Sorghum bicolor (L.) Moench 'Norkan']; sunflower (Helianthus annuus L. 'Hysun 354'); and winter wheat (Triticum aestivum L.)--two cultivars: '2137' and 'Turkey.' Plants were grown for 35 days in lagoon soil or an agricultural soil (Haynie very fine sandy loam; coarse-silty, mixed, superactive, calcareous, mesic Mollic Udifluvent) obtained from a field near the closed lagoon. Ammonium-N (average value of 692 mg/kg) was about 70-85 times greater than the average value of 8-10 mg/kg NH4-N in Kansan soils. The lagoon soil was nonsodic and had a salinity ranking of "medium" with an electrical conductivity averaging 2.29 dS/m. The high ammonium-N concentration in the lagoon soil was not inhibitory to emergence and growth. The eight crops grew taller in the lagoon soil than in the agricultural soil. Except for '2137' wheat, dry weight was higher in the lagoon soil than in the agricultural soil. The results showed that the lagoon soil is not detrimental to early growth of eight crops.

Overview of ecotoxicological studies performed in the Venice Lagoon (Italy).

PubMed

Losso, C; Ghirardini, A Volpi

2010-01-01

This work reports on the state of the art of the bioindicators used to assess environmental quality (regarding chemical pollutant impacts) in the Venice lagoon. After a brief description of the roles, advantages and limitations of bioindicators in marine and transitional environments and a summary of the Venice lagoon characteristics, the ecotoxicological methods used during scientific studies and research projects in the Lagoon are reported. Since not all data are available and no database can be formulated, the main evidence from toxicity bioassays, biomarkers and bioaccumulation analyses since the end of the 1970s is spatially synthesized using maps and discussed according to the four Venice lagoon basins. The majority of indicators showed that the Lido basin (north-central lagoon), affected by the presence of the industrial area and the city of Venice, is the one most highly impacted (particularly in the sites located within or in front of the industrial area, which showed very high sediment toxicity and high levels of DNA damage). The Malamocco basin (south-central lagoon) seems to be the least problematic. The southern basin (Chioggia basin) was shown to be impacted by urban contaminants from the town of Chioggia. The northern basin (Treporti basin) presented both impacted sites (high toxicity and high bioaccumulation factor) and relatively unpolluted sites (absence of toxicity, absence of imposex and low levels of bioaccumulation). This review can serve as a basis on which to select pragmatic, cost-effective biomonitoring techniques for environmental effects in lagoon ecosystems.

Climate change enhances interannual variability of the Nile river flow

NASA Astrophysics Data System (ADS)

Siam, Mohamed S.; Eltahir, Elfatih A. B.

2017-04-01

The human population living in the Nile basin countries is projected to double by 2050, approaching one billion. The increase in water demand associated with this burgeoning population will put significant stress on the available water resources. Potential changes in the flow of the Nile River as a result of climate change may further strain this critical situation. Here, we present empirical evidence from observations and consistent projections from climate model simulations suggesting that the standard deviation describing interannual variability of total Nile flow could increase by 50% (+/-35%) (multi-model ensemble mean +/- 1 standard deviation) in the twenty-first century compared to the twentieth century. We attribute the relatively large change in interannual variability of the Nile flow to projected increases in future occurrences of El Niño and La Niña events and to observed teleconnection between the El Niño-Southern Oscillation and Nile River flow. Adequacy of current water storage capacity and plans for additional storage capacity in the basin will need to be re-evaluated given the projected enhancement of interannual variability in the future flow of the Nile river.

Macroalgae, nutrient cycles, and pollutants in the lagoon of Venice

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sfriso, A.; Pavoni, B.; Marcomini, A.

1992-12-01

The Lagoon of Venice is a wide, shallow coastal basin that extends for about 50 km along the northwest coast of the Adriatic Sea. The lagoon has been substantially modified through the actions of man over the last century through the artificial control of the hydraulic dynamics of the lagoon including the construction of channels to facilitate navigation. The lagoon is subjected to considerable pollutant loading through the drainage of land under cultivation, municipal sewage, and industrial effluents. In this paper are reported the results of observations designed to document recent changes in macroalgal species composition, seasonal cycles of primarymore » producers and nutrient levels, and the effects of the macroalgal community on concentrations of organic and inorganic pollutants. The dominant macroalgae in the lagoon was Ulva rigida, and the levels of plant nutrients and pollutants were influenced by the seasonal cycles of the macroalgal community. 44 refs., 11 figs., 2 tabs.« less

Surface Water Quality Survey of Northern Indian River Lagoon from Sebastian Inlet to Mosquito Lagoon

NASA Astrophysics Data System (ADS)

Weaver, R. J.; Webb, B. M.

2012-12-01

Following news of an emerging brown tide algal bloom in the northern Indian River Lagoon (IRL), researchers sought to gain insight into the surface water quality in the IRL, as well as the extent of the algae coverage. A Portable SeaKeeper from YSI, mounted to a personal watercraft-based coastal profiling system, autonomously collected and analyzed the surface water. The system operates by recording sample data every 12 seconds while continuously underway at speeds up to and greater than 50 km/hr. The researchers covered a transect that started at Sebastian Inlet and followed a zig-zag path extending up through the Haulover Canal and into the Mosquito Lagoon. The survey path covered 166.7 km, and collected 2248 samples. Along the way stops were made at water quality stations used by the Saint John's River Water Management District, so that the data collected can be incorporated into ongoing monitoring efforts. The system analyzed the surface water for dissolved oxygen, pH, chlorophyll-a, salinity, temperature, turbidity, refined fuels, and CDOM. In the two days following the lagoon survey, the inlets at Port Canaveral and Sebastian were also surveyed for tidal currents and hydrography. The IRL transect survey data recorded evidence of the southern extent of the algae bloom in both chlorophyll-a and pH levels. Visual evidence of the bloom was striking as the water in the northern IRL turned a milk chocolaty brown color. Chlorophyll-a levels in the two inlets suggested bloom activity at these locations; however this bloom was different. This oceanic bloom was a result of a persistent upwelling event along the East Florida shelf, and the color was a paler green-yellow. The near-synoptic nature of the comprehensive lagoon survey, conducted in just over 7 hours, allows researchers to obtain a better understanding of water quality in coastal lagoons. Elevated levels of salinity, temperature, and refined fuels in the northern IRL indicate a low exchange rate and absence

Metagenomic Survey of a Military-Impacted Lagoon in Puerto Rico

NASA Astrophysics Data System (ADS)

Davila-Santiago, L.; DeLeon-Rodriguez, N.; LaSanta-Pagan, K. Y.; Kurt, Z.; Padilla-Crespo, E.; Hatt, J.; Spain, J.; Konstantinidis, K.; Massol-Deya, A.

2016-02-01

Military practices have left a legacy of contamination worldwide. In Puerto Rico, the east part of the populated Vieques Island was used for over fifty years as a bombing range by the Navy. A year after the base was closed in 2003, the impacted area was designated as a Superfund site. Previous studies have shown elevated levels of heavy metals, explosives (e.g. RDX, TNT, HMX), and other toxic chemicals at the site. The Anones Lagoon, located in the middle of the bombing range is one of the most polluted spots within the site. Intermittently, the lagoon is connected through a channel to the Caribbean Sea. In order to describe the microbial diversity and its potential contribution to natural attenuation of explosives, sediment samples have been collected since 2005. Sediment from reference lagoons (San Juan and Cabo Rojo) have also been sampled and analyzed in parallel for comparisons. Total DNA was extracted and sequenced using Ilumina My-Seq platform. Results indicate that Gammaproteobacteria were abundant in all lagoons samples but the Vieques lagoon harbors overall different microbial taxa. Alpha diversity analysis showed that Anones was less diverse compared to the pristine Cabo Rojo lagoon. Importantly, a clear shift was seen in the Anones Lagoon in 2013 compared to 2005, were Halomonas spp. became dominant (up to 25%) while other groups like Marinobacter showed signs of enrichment as well. Interestingly, these groups have been shown to degrade explosive-related chemicals in tropical sediments. Functional gene annotation of the Anones metagenome showed the presence of RDX degradation genes such as cytochrome p450. This study is the first comparative metagenomic survey of lagoons in Puerto Rico that explored the microbial diversity and biodegradation potential at Vieques.

Sludge Lagoons. Sludge Treatment and Disposal Course #166. Instructor's Guide [and] Student Workbook.

ERIC Educational Resources Information Center

Sharman, Ronald M.

This lesson describes three different types of sludge lagoons: (1) drying lagoons; (2) facultative lagoons; and (3) anaerobic lagoons. Normal operating sequence and equipment are also described. The lesson is designed to be used in sequence with the complete Sludge Treatment and Disposal Course #166 or as an independent lesson. The instructor's…

Toxic metals in Venics lagoon sediments: Model, observation, an possible removal

DOE Office of Scientific and Technical Information (OSTI.GOV)

Basu, A.; Molinaroli, E.

1994-11-01

We have modeled the distribution of nine toxic metals in the surface sediments from 163 stations in the Venice lagoon using published data. Three entrances from the Adriatic Sea control the circulation in the lagoon and divide it into three basins. We assume, for purposes of modeling, that Porto Marghera at the head of the Industrial Zone area is the single source of toxic metals in the Venice lagoon. In a standing body of lagoon water, concentration of pollutants at distance x from the source (C{sub 0}) may be given by C=C{sub 0}e{sup -kx} where k is the rate constantmore » of dispersal. We calculated k empirically using concentrations at the source, and those farthest from it, that is the end points of the lagoon. Average k values (ppm/km) in the lagoon are: Zn 0.165, Cd 0.116, Hg 0.110, Cu 0.105, Co 0.072, Pb 0.058, Ni 0.008, Cr (0.011) and Fe (0.018 percent/km), and they have complex distributions. Given the k values, concentration at source (C{sub 0}), and the distance x of any point in the lagoon from the source, we have calculated the model concentrations of the nine metals at each sampling station. Tides, currents, floor morphology, additional sources, and continued dumping perturb model distributions causing anomalies (observed minus model concentrations). Positive anomalies are found near the source, where continued dumping perturbs initial boundary conditions, and in areas of sluggish circulation. Negative anomalies are found in areas with strong currents that may flush sediments out of the lagoon. We have thus identified areas in the lagoon where higher rate of sediment removal and exchange may lesson pollution. 41 refs., 4 figs., 3 tabs.« less

West Nile Virus in Farmed Alligators

PubMed Central

Mauel, Michael J.; Baldwin, Charles; Burtle, Gary; Ingram, Dallas; Hines, Murray E.; Frazier, Kendal S.

2003-01-01

Seven alligators were submitted to the Tifton Veterinary Diagnostic and Investigational Laboratory for necropsy during two epizootics in the fall of 2001 and 2002. The alligators were raised in temperature-controlled buildings and fed a diet of horsemeat supplemented with vitamins and minerals. Histologic findings in the juvenile alligators were multiorgan necrosis, heterophilic granulomas, and heterophilic perivasculitis and were most indicative of septicemia or bacteremia. Histologic findings in a hatchling alligator were random foci of necrosis in multiple organs and mononuclear perivascular encephalitis, indicative of a viral cause. West Nile virus was isolated from submissions in 2002. Reverse transcription-polymerase chain reaction (RT-PCR) results on all submitted case samples were positive for West Nile virus for one of four cases associated with the 2001 epizootic and three of three cases associated with the 2002 epizootic. RT-PCR analysis was positive for West Nile virus in the horsemeat collected during the 2002 outbreak but negative in the horsemeat collected after the outbreak. PMID:12890319

First steps of ecological restoration in Mediterranean lagoons: Shifts in phytoplankton communities

NASA Astrophysics Data System (ADS)

Leruste, A.; Malet, N.; Munaron, D.; Derolez, V.; Hatey, E.; Collos, Y.; De Wit, R.; Bec, B.

2016-10-01

Along the French Mediterranean coast, a complex of eight lagoons underwent intensive eutrophication over four decades, mainly related to nutrient over-enrichment from continuous sewage discharges. The lagoon complex displayed a wide trophic gradient from mesotrophy to hypertrophy and primary production was dominated by phytoplankton communities. In 2005, the implementation of an 11 km offshore outfall system diverted the treated sewage effluents leading to a drastic reduction of anthropogenic inputs of nitrogen and phosphorus into the lagoons. Time series data have been examined from 2000 to 2013 for physical, chemical and biological (phytoplankton) variables of the water column during the summer period. Since 2006, total nitrogen and phosphorus concentrations as well as chlorophyll biomass strongly decreased revealing an improvement in lagoon water quality. In summertime, the decline in phytoplankton biomass was accompanied by shifts in community structure and composition that could be explained by adopting a functional approach by considering the common functional traits of the main algal groups. These phytoplankton communities were dominated by functional groups of small-sized and fast-growing algae (diatoms, cryptophytes and green algae). The trajectories of summer phytoplankton communities displayed a complex response to changing nutrient loads over time. While diatoms were the major group in 2006 in all the lagoons, the summer phytoplankton composition in hypertrophic lagoons has shifted towards green algae, which are particularly well adapted to summertime conditions. All lagoons showed increasing proportion and occurrence of peridinin-rich dinophytes over time, probably related to their capacity for mixotrophy. The diversity patterns were marked by a strong variability in eutrophic and hypertrophic lagoons whereas phytoplankton community structure reached the highest diversity and stability in mesotrophic lagoons. We observe that during the re

A study of West Nile virus infection in Iranian blood donors.

PubMed

Sharifi, Zohreh; Mahmoodian Shooshtari, Mahmood; Talebian, Ali

2010-01-01

West Nile virus is a mosquito transmitted virus that can cause disease in humans and horses. A majority of people infected with WNV will have no symptoms or may only experience mild symptoms, such as headaches. About 20% of infected humans develop a flu-like illness characterized by fever; while in the elderly and immunocompromised West Nile virus can cause a more serious neurologic disease and may be fatal. West Nile virus infection is endemic in the Middle East. West Nile virus can also be transmitted by transfusion through infected blood components.The objective of this study is to find the West Nile virus-RNA incidence and anti-West Nile virus prevalence amongst Iranian blood donors in order to determine whether this emerging infection is a possible risk for the blood supply in Iran. Serum samples from 500 blood donors who donated blood at the Tehran Blood Transfusion Center were collected between May and October 2005. Serum samples were examined for IgM and IgG antibodies to West Nile virus using the ELISA method. The samples were tested for the presence of West Nile virus RNA by the real-time RT-polymerase chain reaction assay. All data were analyzed statistically using the Chi-Square test. All 500 donors were negative for West Nile virus-specific IgM antibody at the time of donation. No WNV RNA-positive samples were detected. The percentage of seropositivity of IgG antibodies to WNV was 5% at donation. No evidence of WNV-specific IgM antibody and WNV RNA in blood donor samples was found. In order to increase the safety of blood donation, it is essential to continue surveillance of this emerging infection in order to protect the blood supply in the future.

DESIGN INFORMATION REPORT: PROTECTION OF WASTEWATER LAGOON INTERIOR SLOPES

EPA Science Inventory

A problem common to many wastewater treatment and storage lagoons is erosion of the interior slopes. Erosion may be caused by surface runoff and wind-induced wave action. The soils that compose the steep interior slopes of lagoons are especially susceptible to erosion and slumpin...

Coastal Processes with Improved Tidal Opening in Chilika Lagoon (east Coast of India)

NASA Astrophysics Data System (ADS)

Jayaraman, Girija; Dube, Anumeha

Chilika Lagoon (19°28-19°54¢N and 85°06-85°36¢E) is the largest brackish water lagoon with estuarine character. Interest in detailed analysis of the ecology of the lagoon and the various factors affecting it is due to the opening of the new mouth on September 23, 2000 to resolve the threat to its environment from various factors - Eutrophication, weed proliferation, siltation, industrial pollution, and depletion of bioresources. The opening of the new mouth has changed the lagoon environment significantly with better socio­economic implications. There is a serious concern if the significant improvement in the biological productivity of the lagoon post-mouth opening is indeed sustainable. The present study focuses on the changes in the coastal processes as a result of the additional opening of a new mouth. Our results based on mathematical modeling and numerical simulation compare the dynamics, nutrient, and plankton distribution before and after the new mouth opening. The model could confirm the significant increase (14-66% depending on the sector) in the salinity after the new mouth opening, the maximum change being observed in the channel which connects the lagoon to the sea. The constriction in the lagoon which blocks the tidal effects entering the lagoon must be responsible for maintaining the main body of the lagoon with low salinity. The ecological model is first tested for different sectors individually before a complete model, including the entire lagoon area, is included incorporating their distinct characteristics. The model is validated with available observations of plankton and nutrients made before the opening of the new mouth. It predicts the annual distribution of plankton in all the sectors of the lagoon for post-mouth opening which is to be verified when the data will be forthcoming.

Coastal Processes with Improved Tidal Opening in Chilika Lagoon (east Coast of India)

NASA Astrophysics Data System (ADS)

Jayaraman, Girija; Dube, Anumeha

Chilika Lagoon (19°28-19°54'N and 85°06-85°36'E) is the largest brackish water lagoon with estuarine character. Interest in detailed analysis of the ecology of the lagoon and the various factors affecting it is due to the opening of the new mouth on September 23, 2000 to resolve the threat to its environment from various factors — Eutrophication, weed proliferation, siltation, industrial pollution, and depletion of bioresources. The opening of the new mouth has changed the lagoon environment significantly with better socio-economic implications. There is a serious concern if the significant improvement in the biological productivity of the lagoon post-mouth opening is indeed sustainable. The present study focuses on the changes in the coastal processes as a result of the additional opening of a new mouth. Our results based on mathematical modeling and numerical simulation compare the dynamics, nutrient, and plankton distribution before and after the new mouth opening. The model could confirm the significant increase (14-66% depending on the sector) in the salinity after the new mouth opening, the maximum change being observed in the channel which connects the lagoon to the sea. The constriction in the lagoon which blocks the tidal effects entering the lagoon must be responsible for maintaining the main body of the lagoon with low salinity. The ecological model is first tested for different sectors individually before a complete model, including the entire lagoon area, is included incorporating their distinct characteristics. The model is validated with available observations of plankton and nutrients made before the opening of the new mouth. It predicts the annual distribution of plankton in all the sectors of the lagoon for post-mouth opening which is to be verified when the data will be forthcoming.

Chemistry of modern sediments in a hypersaline lagoon, north of Jeddah, Red Sea

NASA Astrophysics Data System (ADS)

El-Sayed, Mahmoud Kh.

1987-10-01

Previous studies of modern peritidal sedimentary environments of the Red Sea, such as hypersaline lagoons and sea-marginal flats, have concentrated on its northern part, particularly in the Gulf of Aqaba. However, little is known about lagoon sediments in other localities along the Red Sea coastal stretches. This paper deals with the chemical characteristics of the sediments of a hypersaline (Ras Hatiba) lagoon, north of Jeddah, Saudi Arabia. The chemistry of hypersaline lagoon sediments is considerably changed following the modifications to the water chemistry by evaporation and precipitation. Ras Hatiba lagoon is a hypersaline elongated water body connected to the Red Sea by a narrow and shallow opening. The total area of the lagoon is c. 30 km 2. Coarse bioclastic sands are dominant in the lagoon and mostly surround lithified calcareous grounds. However, fine silt and clay sediments are present in separate patches. The sediments are rich in carbonates (average 78·5%) and organic carbon (average 7·3%), although they are negatively correlated. Calcium (average 25·1%) and magnesium (average 10·8‰) show a similar distribution pattern in the lagoon sediments. Strontium (average 5·2‰) is positively correlated with calcium. Sodium and potassium are relatively highly concentrated in the sediments (average 118 ppm and 173 ppm, respectively). Magnesium and strontium are of prime importance in the process of mineralization and diagenesis. The sabkha formation surrounding the lagoon is of low carbonate and organic carbon content, compared with the lagoon sediments, whilst it is characterized by high magnesium, sodium and potassium concentrations. Ras Hatiba lagoon sediments and sabkha resemble those of the northern Red Sea in the Gulfs of Aqaba and Suez and the Arabian Gulf in their major sedimentological and chemical characteristics.

Origin of the diagenetic carbonate crusts and concretions from the mud volcanoes of the Nile deep-sea fan

NASA Astrophysics Data System (ADS)

Gontharet, S.; Pierre, C.; Blanc Valleron, M.; Rouchy, J.; Fouquet, Y.; Bayon, G.

2004-12-01

During the NAUTINIL cruise (September -October 2003), 22 submersible dives have been realized in the Nile deep-sea fan area to investigate by a multidisciplinary approach, selected mud volcanoes which are very abundant and of various morphologies in the whole area (Loncke et al., 2004). The deepest site (3019 m) located in the western part of the deep-sea fan, corresponds to a large caldera (about 8 km of diameter) where brines are seeping along the flanks of the structure and are sometimes collected in pools and lakes. The other sites in the central and eastern parts of the Nile deep-sea fan correspond respectively to pock-marks located at 2120 m and to a mud volcano located at 1130 m where active fluid ventings were identified by the presence of living benthic organisms (mainly vestimentiferan worms; rarely bivalves). At these three sites, hard carbonate crusts cover irregularly the sea floor and are sometimes present as dispersed fragments within the topmost sediments. The sediments from the venting areas are organic-rich and have a strong H2S smell which is indicative of active sulfate reduction. Petrographic observations and XRD analyses of the carbonate crusts indicate that aragonite, calcite, Mg-calcite are the dominant authigenic carbonate phases with a minor contribution of dolomite ; small concretions of ankerite occur occasionally in the sediments of the eastern delta. Millimeter sized barite concretions have also been discovered in the pock-marks sediments. The oxygen and carbon isotopic compositions of the bulk carbonate from crusts and concretions exibit large variations : -0.67 < \\delta18O\\permil PDB < 4.66 -44.17< \\delta13C \\permil PDB < 3.10 The distribution of the isotopic values is explained by the mixing of the authigenic carbonates with the sedimentary matrix which corresponds itself to a mixture of pelagic sediments and mud breccia issued from the mud volcano activity. The rather large range of \\delta18O values might reflect variable

The distribution of salinity and main forcing effects in the Berre lagoon

NASA Astrophysics Data System (ADS)

Roux, Bernard; Alekseenko, Elena; Chen, Paul Gang; Kharif, Christian; Kotarba, Richard; Fougere, Dominique

2014-05-01

The results from previous studies in lagoons and well mixed estuaries indicate that salt transport is primarily in response to advection associated with freshwater outflow, tidal diffusion, and to shear effects arising from spatial correlations of vertical and especially transverse deviations in salinity and current speed (Smith, 1994). Therefore, the inflow of fresh and salt water into coastal lagoons is an important factor influencing the structure and function of lagoonal ecosystems worldwide (Lirman et al., 2007). The predominance of marine or freshwater inflow leads to the different ecosystems. Among several lagoons located along the Mediterranean shore of France, the Berre lagoon has been under intense anthropogenic pressure for several decades (Delpy et al., 2012). Moreover, the salinity level of the Berre lagoon was varying dramatically from the 19th century up to now. In this work, a special attention is focused on the salinity variation in the Berre lagoon due to the three dominant abiotic forcing mechanisms, i.e., incoming sea tide, runoff from a hydropower and a strong wind. Four different model scenarios were considered in order to examine the impact of each forcing mechanism or combined effects, i.e. : (a) tide only, (b) runoff only, (c) combined tide and runoff, and (d) an N-NW wind, tide and runoff together. Numerical modeling and interpretation of numerical results are based on three-dimensional hydrodynamic model MARS3D. It is found that the strongest negative impact is related to the huge hydropower runoffs, inducing the desalinization of the surface and subsurface waters not only in the centre of the lagoon, but also in the entire water column in the coastal seagrass recolonization zones. In the absence of wind, the huge inputs of freshwater from the hydropower lead to a haline stratification and thus, to anoxic conditions, making most of the lagoon unproductive. On the contrary, strong winds play a positive role on the salinity level of the

Environmental Assessment of the Bolinas Lagoon: a study utilizing benthic foraminifera

NASA Astrophysics Data System (ADS)

Benton, L.; Espinoza Madrid, N.; Grande, C.

2016-12-01

Benthic foraminifera have long been recognized for their utility in environmental assessments. They are abundant, diverse, and found in all marine environments, but species distributions depend largely on local environmental conditions. This study analyses benthic foraminiferal assemblages from the Bolinas Lagoon, Marin County, California. The Careers in Science Intern Program collected 36 sediment samples from 13 sites within the Bolinas Lagoon. Foraminiferal assemblages for each site are reported, and species richness, relative abundance, and Shannon's diversity calculated. Results indicate that Shannon's diversity is low throughout the Bolinas Lagoon and stress tolerant taxa are abundant, which suggests that current conditions in the Bolinas Lagoon are sub optimal.

Vaccines in development against West Nile virus.

PubMed

Brandler, Samantha; Tangy, Frederic

2013-09-30

West Nile encephalitis emerged in 1999 in the United States, then rapidly spread through the North American continent causing severe disease in human and horses. Since then, outbreaks appeared in Europe, and in 2012, the United States experienced a new severe outbreak reporting a total of 5,387 cases of West Nile virus (WNV) disease in humans, including 243 deaths. So far, no human vaccine is available to control new WNV outbreaks and to avoid worldwide spreading. In this review, we discuss the state-of-the-art of West Nile vaccine development and the potential of a novel safe and effective approach based on recombinant live attenuated measles virus (MV) vaccine. MV vaccine is a live attenuated negative-stranded RNA virus proven as one of the safest, most stable and effective human vaccines. We previously described a vector derived from the Schwarz MV vaccine strain that stably expresses antigens from emerging arboviruses, such as dengue, West Nile or chikungunya viruses, and is strongly immunogenic in animal models, even in the presence of MV pre-existing immunity. A single administration of a recombinant MV vaccine expressing the secreted form of WNV envelope glycoprotein elicited protective immunity in mice and non-human primates as early as two weeks after immunization, indicating its potential as a human vaccine.

The modern Nile sediment system: Processes and products

NASA Astrophysics Data System (ADS)

Garzanti, Eduardo; Andò, Sergio; Padoan, Marta; Vezzoli, Giovanni; El Kammar, Ahmed

2015-12-01

We trace compositional changes of Nile sediments for 7400 km, from their sources in equatorial rift highlands of Burundi and Rwanda to their sink in the Mediterranean Sea. All chemical and physical controls on sediment petrography, mineralogy and geochemistry, including weathering, grain-size, hydraulic sorting, mechanical breakdown, anthropic impact, mixing and recycling are investigated in detail. The Nile course is controlled along its entire length by the East African-Red Sea Rift. In this anorogenic setting, detritus is derived in various proportions from volcanic fields associated with tectonic extension (Anorogenic Volcanic provenance) and from igneous, metamorphic and sedimentary rocks uplifted on the rift shoulders or exposed on the craton (Continental Block provenance). The entire spectrum of such detrital signatures is displayed in the Nile catchment. Volcaniclastic Atbara sand is generated by focused erosion of the Ethiopian basaltic plateau in semiarid climate, whereas quartzose White Nile sand reflects low erosion rates, extensive weathering and sediment trapping in lakes and swamps at equatorial to subequatorial latitudes. In the main Nile, as in its main tributary the Blue Nile, suspended load is volcaniclastic, whereas feldspatho-quartzose bedload is derived largely from basement sources, with fine to medium-grained eolian sand added along the lower course. Mixing of detrital populations with different provenance and grain size is reflected in diverse violations of settling-equivalence relationships in fluvial and deltaic sediments. Sediment delivery from Sudan has been cut off after closure of the Aswan High Dam and accelerated erosion of deltaic cusps is leading to local formation of placer lags dominated by ultradense Fe-Ti-Cr oxides, but mineralogical changes caused by man's radical modification of fluvial regimes have been minor so far. In beaches of Sinai, Gaza and Israel, the Nile volcaniclastic trace gets progressively diluted by quartzose

Evaluation of short-rotation woody crops to stabilize a decommissioned swine lagoon

Treesearch

K.C. Dipesh; Rodney E. Will; Thomas C. Hennessey; Chad J. Penn

2012-01-01

Fast growing tree stands represent an environmentally friendly, less expensive method for stabilization of decommissioned animal production lagoons than traditional lagoon closure. We tested the feasibility of using short-rotation woody crops (SRWCs) in central Oklahoma to close a decommissioned swine lagoon by evaluating the growth performance and nutrient uptake of...

Seasonal Variability in Mercury Speciation within Select Coastal Lagoons of Central California

NASA Astrophysics Data System (ADS)

Ganguli, P. M.; Conaway, C. H.; Dimova, N. T.; Swarzenski, P. W.; Kehrlein, N. C.; Flegal, A. R.

2011-12-01

Coastal lagoons may play an important role in mercury biogeochemical cycling at the land-sea margin. Along the coast of California, these systems are seasonally dynamic, behaving as estuaries during the wet season and as lagoons in the dry season when ephemeral sand berms develop and isolate terrestrial freshwater from direct exchange with the ocean. As a consequence, many lagoons become eutrophic in the dry season and are characterized by high nutrient and low dissolved oxygen concentrations. Because monomethylmercury (MMHg) production can be mediated by anaerobic bacteria, coastal lagoons are a potential source of biologically available MMHg that may be transported to the nearshore environment via submarine groundwater discharge. To evaluate the importance of coastal lagoons at the land-sea margin, we quantified total mercury (HgT) and MMHg concentrations in surface water and coastal seawater from six sites during dry and wet season conditions, including one storm event. Additionally, we conducted a tidal study at one lagoon in which we sampled surface water, seawater, and groundwater over a 10-hour period during a falling tide (+1.63 to 0.00 m). Groundwater was collected using a multi-port piezometer screened at depths ranging from 1 m to a few centimeters below the lagoon's sediment-water interface. This enabled us to characterize surface water - groundwater interaction. During wet season conditions, the average unfiltered HgT (U-HgT) concentration in surface water at the tidal study lagoon was 13 pM and did not fluctuate in response to tidal changes. Filtered (< 0.45 μm) HgT (F-HgT) concentrations in the lagoon were similar to U-HgT concentrations during high tide and decreased to 8 pM during low tide. Groundwater F-HgT concentrations were about 1.5 pM at a depth of 1 m and systematically increased at shallower depths, reaching approximately 6 pM near the surface. These data indicate F-HgT exchange between the lagoon and groundwater to a depth of at least 1 m

The effect of floods on sediment contamination in a microtidal coastal lagoon: the lagoon of Lesina, Italy.

PubMed

D'Adamo, Raffaele; Specchiulli, Antonietta; Cassin, Daniele; Botter, Margherita; Zonta, Roberto; Fabbrocini, Adele

2014-10-01

The effects on the microtidal lagoon of Lesina of runoff and the discharge of water and material from agricultural activities were investigated combining chemical analyses of pollutants [11 metals and 16 priority polycyclic aromatic compounds (PAHs)], determination of organic matter and grain size, and performance of innovative ecotoxicological tests. For metals, enrichment factors >3 for arsenic, nickel, and copper (Cu) were observed in the eastern zone of the lagoon, which is affected by nearby urban activities with discharge of water and domestic waste and by agricultural input with waters rich in fertilizers. Cu was correlated with no other metal, and its high concentrations (≤77 µg g(-1)) may result from the use of Cu-based fungicides in vineyards. Total PAHs (2,230 ± 3,150 ng g(-1)) displayed a wide range of concentrations with hot spots near freshwater inputs from the part of the catchment area exploited for wheat crops. Pyrolitic contamination also emerged, with higher-mass PAH congeners, such as asphalt, bitumen or coal, usually present in higher fractions as the dominant components. Ecotoxicological evaluations recorded moderate to high toxicity levels; the innovative MOT test bioassay showed good discriminatory ability because it identified a lagoon area whose inputs mainly depend on agricultural activities and which is impacted by metals rather than PAHs. Floods during periods of heavy rain and the discharge of water and material from agricultural activities may impact vulnerable systems, such as the lagoon of Lesina, where the presence of hot spots with remarkably high pollution values was observed.

Sludge-Drying Lagoons: a Potential Significant Methane Source in Wastewater Treatment Plants.

PubMed

Pan, Yuting; Ye, Liu; van den Akker, Ben; Ganigué Pagès, Ramon; Musenze, Ronald S; Yuan, Zhiguo

2016-02-02

"Sludge-drying lagoons" are a preferred sludge treatment and drying method in tropical and subtropical areas due to the low construction and operational costs. However, this method may be a potential significant source of methane (CH4) because some of the organic matter would be microbially metabolized under anaerobic conditions in the lagoon. The quantification of CH4 emissions from lagoons is difficult due to the expected temporal and spatial variations over a lagoon maturing cycle of several years. Sporadic ebullition of CH4, which cannot be easily quantified by conventional methods such as floating hoods, is also expected. In this study, a novel method based on mass balances was developed to estimate the CH4 emissions and was applied to a full-scale sludge-drying lagoon over a three year operational cycle. The results revealed that processes in a sludge-drying lagoon would emit 6.5 kg CO2-e per megaliter of treated sewage. This would represent a quarter to two-thirds of the overall greenhouse gas (GHG) emissions from wastewater-treatment plants (WWTPs). This work highlights the fact that sludge-drying lagoons are a significant source of CH4 that adds substantially to the overall GHG footprint of WWTPs despite being recognized as a cheap and energy-efficient means of drying sludge.

Publications - GMC 3 | Alaska Division of Geological & Geophysical Surveys

Science.gov Websites

: Colville Delta State #1; Plaghm Beechey Point #1; Ugnu #1; Simpson Lagoon #32-14; Placid State #1 (3-10-13 Slope Alaska wells: Colville Delta State #1; Plaghm Beechey Point #1; Ugnu #1; Simpson Lagoon #32-14

Redistribution of fallout radionuclides in Enewetak Atoll lagoon sediments by callianassid bioturbation.

PubMed

McMurtry, G M; Schneider, R C; Colin, P L; Buddemeier, R W; Suchanek, T H

The lagoon sediments of Enewetak Atoll in the Marshall Islands contain a large selection of fallout radionuclides as a result of 43 nuclear weapon tests conducted there between 1948 and 1958. Studies of the burial of fallout radionuclides have been conducted on the islands and in several of the large craters, but studies of their vertical distribution have been limited to about the upper 20 cm of the lagoon sediments. We have found elevated fallout radionuclide concentrations buried more deeply in the lagoon sediments and evidence of burrowing into the sediment by several species of callianassid ghost shrimp (Crustacea: Thalassinidea) which has displaced highly radioactive sediment. The burrowing activities of callianassids, which are ubiquitous on the lagoon floor, facilitate radionuclide redistribution and complicate the fallout radionuclide inventory of the lagoon.

Explaining and forecasting interannual variability in the flow of the Nile River

NASA Astrophysics Data System (ADS)

Siam, M. S.; Eltahir, E. A. B.

2014-05-01

The natural interannual variability in the flow of Nile River had a significant impact on the ancient civilizations and cultures that flourished on the banks of the river. This is evident from stories in the Bible and Koran, and from the numerous Nilometers discovered near ancient temples. Here, we analyze extensive data sets collected during the 20th century and define four modes of natural variability in the flow of Nile River, identifying a new significant potential for improving predictability of floods and droughts. Previous studies have identified a significant teleconnection between the Nile flow and the Eastern Pacific Ocean. El Niño-Southern Oscillation (ENSO) explains about 25% of the interannual variability in the Nile flow. Here, we identify, for the first time, a region in the southern Indian Ocean with similarly strong teleconnection to the Nile flow. Sea Surface Temperature (SST) in the region (50-80° E and 25-35° S) explains 28% of the interannual variability in the Nile flow. During those years with anomalous SST conditions in both Oceans, we estimate that indices of the SSTs in the Pacific and Indian Oceans can collectively explain up to 84% of the interannual variability in the flow of Nile. Building on these findings, we use classical Bayesian theorem to develop a new hybrid forecasting algorithm that predicts the Nile flow based on global models predictions of indices of the SST in the Eastern Pacific and Southern Indian Oceans.

Spatiotemporal variation of bacterial community composition and possible controlling factors in tropical shallow lagoons.

PubMed

Laque, Thaís; Farjalla, Vinicius F; Rosado, Alexandre S; Esteves, Francisco A

2010-05-01

Bacterial community composition (BCC) has been extensively related to specific environmental conditions. Tropical coastal lagoons present great temporal and spatial variation in their limnological conditions, which, in turn, should influence the BCC. Here, we sought for the limnological factors that influence, in space and time, the BCC in tropical coastal lagoons (Rio de Janeiro State, Brazil). The Visgueiro lagoon was sampled monthly for 1 year and eight lagoons were sampled once for temporal and spatial analysis, respectively. BCC was evaluated by bacteria-specific PCR-DGGE methods. Great variations were observed in limnological conditions and BCC on both temporal and spatial scales. Changes in the BCC of Visgueiro lagoon throughout the year were best related to salinity and concentrations of NO (3) (-) , dissolved phosphorus and chlorophyll-a, while changes in BCC between lagoons were best related to salinity and dissolved phosphorus concentration. Salinity has a direct impact on the integrity of the bacterial cell, and it was previously observed that phosphorus is the main limiting nutrient to bacterial growth in these lagoons. Therefore, we conclude that great variations in limnological conditions of coastal lagoons throughout time and space resulted in different BCCs and salinity and nutrient concentration, particularly dissolved phosphorus, are the main limnological factors influencing BCC in these tropical coastal lagoons.

An integrated Pan-European perspective on coastal Lagoons management through a mosaic-DPSIR approach

PubMed Central

Dolbeth, Marina; Stålnacke, Per; Alves, Fátima L.; Sousa, Lisa P.; Gooch, Geoffrey D.; Khokhlov, Valeriy; Tuchkovenko, Yurii; Lloret, Javier; Bielecka, Małgorzata; Różyński, Grzegorz; Soares, João A.; Baggett, Susan; Margonski, Piotr; Chubarenko, Boris V.; Lillebø, Ana I.

2016-01-01

A decision support framework for the management of lagoon ecosystems was tested using four European Lagoons: Ria de Aveiro (Portugal), Mar Menor (Spain), Tyligulskyi Liman (Ukraine) and Vistula Lagoon (Poland/Russia). Our aim was to formulate integrated management recommendations for European lagoons. To achieve this we followed a DPSIR (Drivers-Pressures-State Change-Impacts-Responses) approach, with focus on integrating aspects of human wellbeing, welfare and ecosystem sustainability. The most important drivers in each lagoon were identified, based on information gathered from the lagoons’ stakeholders, complemented by scientific knowledge on each lagoon as seen from a land-sea perspective. The DPSIR cycles for each driver were combined into a mosaic-DPSIR conceptual model to examine the interdependency between the multiple and interacting uses of the lagoon. This framework emphasizes the common links, but also the specificities of responses to drivers and the ecosystem services provided. The information collected was used to formulate recommendations for the sustainable management of lagoons within a Pan-European context. Several common management recommendations were proposed, but specificities were also identified. The study synthesizes the present conditions for the management of lagoons, thus analysing and examining the activities that might be developed in different scenarios, scenarios which facilitate ecosystem protection without compromising future generations. PMID:26776151

Transmission of West Nile virus from an organ donor to four transplant recipients.

PubMed

Iwamoto, Martha; Jernigan, Daniel B; Guasch, Antonio; Trepka, Mary Jo; Blackmore, Carina G; Hellinger, Walter C; Pham, Si M; Zaki, Sherif; Lanciotti, Robert S; Lance-Parker, Susan E; DiazGranados, Carlos A; Winquist, Andrea G; Perlino, Carl A; Wiersma, Steven; Hillyer, Krista L; Goodman, Jesse L; Marfin, Anthony A; Chamberland, Mary E; Petersen, Lyle R

2003-05-29

In August 2002, fever and mental-status changes developed in recipients of organs from a common donor. Transmission of West Nile virus through organ transplantation was suspected. We reviewed medical records, conducted interviews, and collected blood and tissue samples for testing with a variety of assays. Persons who donated blood to the organ donor and associated blood components were identified and tested for West Nile virus. We identified West Nile virus infection in the organ donor and in all four organ recipients. Encephalitis developed in three of the organ recipients, and febrile illness developed in one. Three recipients became seropositive for West Nile virus IgM antibody; the fourth recipient had brain tissue that was positive for West Nile virus by isolation and nucleic acid and antigen assays. Serum specimens obtained from the organ donor before and immediately after blood transfusions showed no evidence of West Nile virus; however, serum and plasma samples obtained at the time of organ recovery were positive on viral nucleic acid testing and viral culture. The organ donor had received blood transfusions from 63 donors. A review of blood donors and follow-up testing identified one donor who had viremia at the time of donation and who became seropositive for West Nile virus IgM antibodies during the next two months. Our investigation of this cluster documents the transmission of West Nile virus by organ transplantation. Organ recipients receiving immunosuppressive drugs may be at high risk for severe disease after West Nile virus infection. Blood transfusion was the probable source of the West Nile virus viremia in the organ donor. Copyright 2003 Massachusetts Medical Society

Molecular cloning of NILE glycoprotein and evidence for its continued expression in mature rat CNS.

PubMed

Prince, J T; Alberti, L; Healy, P A; Nauman, S J; Stallcup, W B

1991-11-01

The NILE glycoprotein is a rat neuronal cell adhesion molecule which has been reported to be very similar in structure, function, and distribution to the mouse L1 glycoprotein. Here we report the complete nucleotide sequence of the NILE message (5,208 nucleotides) and the deduced amino acid sequence of the NILE polypeptide (1,257 amino acids). The predicted NILE protein is 96% identical to L1 at the amino acid level, confirming that the two molecules are homologues. The sequence information shows that NILE is a transmembrane molecule with an extensive ectodomain and a much smaller cytoplasmic domain. The extracellular portion of the molecule contains six immunoglobulin C-2 type domains followed by five fibronectin type III repeats. These two structural motifs are characteristic of several other cell adhesion molecules. The cytoplasmic tails of NILE and L1 are identical to each other and distinct from the cytoplasmic regions of all other cell adhesion molecules except Ng-CAM and neuroglian. Several possible sites for phosphorylation are present in the cytoplasmic tail of NILE. Antisera were produced against two NILE-beta-galactosidase fusion proteins containing distinct segments of the NILE polypeptide: the cytoplasmic domain and the segment containing fibronectin type III repeats. Immunoblots with these antisera and Northern blots with a NILE cDNA probe indicate that NILE continues to be expressed in most areas of the mature rat brain. This contradicts previous immunofluorescence data, which suggested that NILE was substantially down-regulated in maturing nerve fiber tracts. This raises the possibility that NILE could be masked in situ by interactions with other cell surface molecules.

Mechanism of nitrogen removal in wastewater lagoon: a case study.

PubMed

Vendramelli, Richard A; Vijay, Saloni; Yuan, Qiuyan

2017-06-01

Ammonia being a nutrient facilitates the growth of algae in wastewater and causes eutrophication. Nitrate poses health risk if it is present in drinking water. Hence, nitrogen removal from wastewater is required. Lagoon wastewater treatment systems have become common in Canada these days. The study was conducted to understand the nitrogen removal mechanisms from the existing wastewater treatment lagoon system in the town of Lorette, Manitoba. The lagoon system consists of two primary aerated cells and two secondary unaerated cells. Surface samples were collected periodically from lagoon cells and analysed from 5 May 2015 to 9 November 2015. The windward and leeward sides of the ponds were sampled and the results were averaged. It was found that the free ammonia volatilization to the atmosphere is responsible for most of the ammonia removal. Ammonia and nitrate assimilation into biomass and biological growth in the cells appears to be the other mechanisms of nitrogen removal over the monitoring period. Factors affecting the nitrogen removal efficiency were found to be pH, temperature and hydraulic residence time. Also, the ammonia concentration in the effluent from the wastewater treatment lagoon was compared with the regulatory standard.

Natural disturbance shapes benthic intertidal macroinvertebrate communities of high latitude river deltas

USGS Publications Warehouse

Churchwell, Roy T.; Kendall, Steve J.; Blanchard, Amy L.; Dunton, Kenneth H.; Powell, Abby N.

2016-01-01

Unlike lower latitude coastlines, the estuarine nearshore zones of the Alaskan Beaufort Sea are icebound and frozen up to 9 months annually. This annual freezing event represents a dramatic physical disturbance to fauna living within intertidal sediments. The main objectives of this study were to describe the benthic communities of Beaufort Sea deltas, including temporal changes and trophic structure. Understanding benthic invertebrate communities provided a baseline for concurrent research on shorebird foraging ecology at these sites. We found that despite continuous year-to-year episodes of annual freezing, these estuarine deltas are populated by a range of invertebrates that represent both marine and freshwater assemblages. Freshwater organisms like Diptera and Oligochaeta not only survive this extreme event, but a marine invasion of infaunal organisms such as Amphipoda and Polychaeta rapidly recolonizes the delta mudflats following ice ablation. These delta sediments of sand, silt, and clay are fine in structure compared to sediments of other Beaufort Sea coastal intertidal habitats. The relatively depauperate invertebrate community that ultimately develops is composed of marine and freshwater benthic invertebrates. The composition of the infauna also reflects two strategies that make life on Beaufort Sea deltas possible: a migration of marine organisms from deeper lagoons to the intertidal and freshwater biota that survive the 9-month ice-covered period in frozen sediments. Stable isotopic analyses reveal that both infaunal assemblages assimilate marine and terrestrial sources of organic carbon. These results provide some of the first quantitative information on the infaunal food resources of shallow arctic estuarine systems and the long-term persistence of these invertebrate assemblages. Our data help explain the presence of large numbers of shorebirds in these habitats during the brief summer open-water period and their trophic importance to migrating

Environmental quality of transitional waters: the lagoon of Venice case study.

PubMed

Micheletti, C; Gottardo, S; Critto, A; Chiarato, S; Marcomini, A

2011-01-01

The health status of European aquatic environments, including transitional waters such as coastal lagoons, is regulated by the Water Framework Directive (WFD), which requires the classification of the water bodies' environmental quality and the achievement of a good ecological status by 2015. In the Venice lagoon, a transitional water body located in the northeastern part of Italy, the achievement of a good ecological status is hampered by several anthropogenic and natural pressures, such as sediment and water chemical contamination, and sediment erosion. In order to evaluate the lagoon's environmental quality according to the WFD (i.e. 5 quality classes, from High to Bad), an integrated Weight-of-Evidence methodology was developed and applied to classify the quality of the lagoon water bodies, integrating biological, physico-chemical, chemical, ecotoxicological, and hydromorphological data (i.e. Lines of Evidence, LOE). The quality assessment was carried out in two lagoon habitat typologies (previously defined on the basis of morphological, sediment, and hydrodynamic characteristics) which were selected taking into account the ecological gradient from sea to land, and the differences in anthropogenic pressure and contamination levels. The LOE classification was carried out by using indicators scored by comparing site specific conditions to reference conditions measured in lagoon reference sites, or provided by local, national or European regulations (e.g. Environmental Quality Standards, EQS, for chemicals). Finally, the overall quality status for each water body was calculated by a probabilistic approach, i.e. by reporting the final result as the frequency distribution of quality classes. The developed procedure was applied by using data and information concerning selected LOE and collected from monitoring programs and research studies carried out in the last 15 years in the lagoon of Venice. A set of sampling stations characterized by spatially and temporally

Is Solar Variability Reflected in the Nile River?

NASA Technical Reports Server (NTRS)

Ruzmaikin, Alexander; Feynman, Joan; Yung, Yuk L.

2006-01-01

We investigate the possibility that solar variability influences North African climate by using annual records of the water level of the Nile collected in 622-1470 A.D. The time series of these records are nonstationary, in that the amplitudes and frequencies of the quasi-periodic variations are time-dependent. We apply the Empirical Mode Decomposition technique especially designed to deal with such time series. We identify two characteristic timescales in the records that may be linked to solar variability: a period of about 88 years and one exceeding 200 years. We show that these timescales are present in the number of auroras reported per decade in the Northern Hemisphere at the same time. The 11-year cycle is seen in the Nile's high-water level variations, but it is damped in the low-water anomalies. We suggest a possible physical link between solar variability and the low-frequency variations of the Nile water level. This link involves the influence of solar variability on the atmospheric Northern Annual Mode and on its North Atlantic Ocean and Indian Ocean patterns that affect the rainfall over the sources of the Nile in eastern equatorial Africa.

Vaccines in Development against West Nile Virus

PubMed Central

Brandler, Samantha; Tangy, Frederic

2013-01-01

West Nile encephalitis emerged in 1999 in the United States, then rapidly spread through the North American continent causing severe disease in human and horses. Since then, outbreaks appeared in Europe, and in 2012, the United States experienced a new severe outbreak reporting a total of 5,387 cases of West Nile virus (WNV) disease in humans, including 243 deaths. So far, no human vaccine is available to control new WNV outbreaks and to avoid worldwide spreading. In this review, we discuss the state-of-the-art of West Nile vaccine development and the potential of a novel safe and effective approach based on recombinant live attenuated measles virus (MV) vaccine. MV vaccine is a live attenuated negative-stranded RNA virus proven as one of the safest, most stable and effective human vaccines. We previously described a vector derived from the Schwarz MV vaccine strain that stably expresses antigens from emerging arboviruses, such as dengue, West Nile or chikungunya viruses, and is strongly immunogenic in animal models, even in the presence of MV pre-existing immunity. A single administration of a recombinant MV vaccine expressing the secreted form of WNV envelope glycoprotein elicited protective immunity in mice and non-human primates as early as two weeks after immunization, indicating its potential as a human vaccine. PMID:24084235

West Nile virus: a primer for the otolaryngologist.

PubMed

Michaelson, Peter G; Mair, Eric A

2005-03-01

Since recognition in the United States with a 1999 New York City epidemic, West Nile virus has enduringly migrated westward, leaving few states unaffected. Infection rates are rising at an alarming rate, doubling every year since introduction, with more than 9800 cases in 2003 alone and more than 260 deaths. Patients may present with myriad symptoms including a maculopapular rash that affects the face and trunk and diffuse lymphadenopathy, both of which may result in the initial consultation of the otolaryngologist. We review the clinical history of West Nile virus and its epidemiology, laboratory findings, and variable clinical presentation, with an emphasis on otolaryngologic manifestations. STUDY DESIGN AND SETTING COMPREHENSIVE: review of the literature over the past 50 years with an emphasis on what the present-day otolaryngologist needs to know concerning West Nile virus. Clinical manifestations of the head and neck such as encephalitis, meningitis, maculopapular rash, lymphadenopathy and dysphagia are discussed. To date, there are no articles in the otolaryngology literature discussing West Nile virus. These patients may present initially to multiple providers in diverse specialties because of multifarious initial signs and symptoms. The otolaryngologist must be educated on this quickly growing affliction and practice with a high index of suspicion. In this article we describe the clinical manifestations of West Nile virus, with an emphasis on the otolaryngologic manifestations. The otolaryngologist must become educated about this entity to facilitate preventative measures, adequately treat, and assist other providers in hopeful control and potential eradication of this infectious threat.

Interannual and cyclone-driven variability in phytoplankton communities of a tropical coastal lagoon.

PubMed

Srichandan, Suchismita; Kim, Ji Yoon; Kumar, Abhishek; Mishra, Deepak R; Bhadury, Punyasloke; Muduli, Pradipta R; Pattnaik, Ajit K; Rastogi, Gurdeep

2015-12-15

One of the main challenges in phytoplankton ecology is to understand their variability at different spatiotemporal scales. We investigated the interannual and cyclone-derived variability in phytoplankton communities of Chilika, the largest tropical coastal lagoon in Asia and the underlying mechanisms in relation to environmental forcing. Between July 2012 and June 2013, Cyanophyta were most prolific in freshwater northern region of the lagoon. A category-5 very severe cyclonic storm (VSCS) Phailin struck the lagoon on 12th October 2013 and introduced additional variability into the hydrology and phytoplankton communities. Freshwater Cyanophyta further expanded their territory and occupied the northern as well as central region of the lagoon. Satellite remote sensing imagery revealed that the phytoplankton biomass did not change much due to high turbidity prevailing in the lagoon after Phailin. Modeling analysis of species-salinity relationship identified specific responses of phytoplankton taxa to the different salinity regime of lagoon. Copyright © 2015 Elsevier Ltd. All rights reserved.

[West Nile virus transmission risk in the Czech Republic].

PubMed

Vlčková, J; Rupeš, V; Horáková, D; Kollárová, H; Holý, O

2015-06-01

West Nile Virus (WNV) belongs to the family Flaviviridae. It is transmitted to humans by mosquitoes, capable of sucking blood on birds and mammals, most often by mosquitoes of the genus Culex. In humans, the virus was first identified in 1937 in the West Nile region, Uganda, Africa. Later, the virus spread and caused more or less severe epidemics of West Nile fever in North Africa, Europe, Asia, and North and South America. During the last two decades, WNV has been on the rise and is currently ranked as one of the most prevalent arboviruses in the world. In humans, WNV infection mostly occurs as asymptomatic, but may have a more severe or even fatal course in older and weakened patients. Humans may become infected not only by mosquitoes that acquire the virus from infected birds, but also through a blood transfusion, organ transplant, breast milk and transplacental transmission, or contact with infected animals, their blood, and tissues. The first autochthonous human case of West Nile fever in the Czech Republic was reported from South Moravia in 1997. In 2013, another case of West Nile fever emerged in this country, in the Ostrava area. The issue of WNV has recently been studied from many different perspectives, as evidenced by many original and review papers. This article briefly reviews the essential knowledge about this virus and its spread.

Reconstruction of historic sea ice conditions in a sub-Arctic lagoon

USGS Publications Warehouse

Petrich, Chris; Tivy, Adrienne C.; Ward, David H.

2014-01-01

Historical sea ice conditions were reconstructed for Izembek Lagoon, Bering Sea, Alaska. This lagoon is a crucial staging area during migration for numerous species of avian migrants and a major eelgrass (Zostera marina) area important to a variety of marine and terrestrial organisms, especially Pacific Flyway black brant geese (Branta bernicla nigricans). Ice cover is a common feature of the lagoon in winter, but appears to be declining, which has implications for eelgrass distribution and abundance, and its use by wildlife. We evaluated ice conditions from a model based on degree days, calibrated to satellite observations, to estimate distribution and long-term trends in ice conditions in Izembek Lagoon. Model results compared favorably with ground observations and 26 years of satellite data, allowing ice conditions to be reconstructed back to 1943. Specifically, periods of significant (limited access to eelgrass areas) and severe (almost complete ice coverage of the lagoon) ice conditions could be identified. The number of days of severe ice within a single season ranged from 0 (e.g., 2001) to ≥ 67 (e.g., 2000). We detected a slight long-term negative trend in ice conditions, superimposed on high inter-annual variability in seasonal aggregate ice conditions. Based on reconstructed ice conditions, the seasonally cumulative number of significant or severe ice days correlated linearly with mean air temperature from January until March. Further, air temperature at Izembek Lagoon was correlated with wind direction, suggesting that ice conditions in Izembek Lagoon were associated with synoptic-scale weather patterns. Methods employed in this analysis may be transferable to other coastal locations in the Arctic.

Dynamics of copper and zinc sedimentation in a lagooning system receiving landfill leachate.

PubMed

Guigue, Julien; Mathieu, Olivier; Lévêque, Jean; Denimal, Sophie; Steinmann, Marc; Milloux, Marie-Jeanne; Grisey, Hervé

2013-11-01

This study characterises the sediment dredged from a lagooning system composed of a settling pond and three lagoons that receive leachates from a municipal solid waste (MSW) landfill in France. Organic carbon, carbonate, iron oxyhydroxides, copper (Cu) and zinc (Zn) concentrations were measured in the sediment collected from upstream to downstream in the lagooning system. In order to complete our investigation of sedimentation mechanisms, leachates were sampled in both dry (spring) and wet (winter) seasonal conditions. Precipitation of calcite and amorphous Fe-oxyhydroxides and sedimentation of organic matter occurred in the settling pond. Since different distributions of Zn and Cu concentrations are measured in sediment samples collected downstream in the lagooning system, it is suggested that these elements were not distributed in a similar way in the leachate fractions during the first stage of treatment in the settling pond, so that their sedimentation dynamics in the lagooning system differ. In the lagoons, it was found that organic carbon plays a major role in Cu and Zn mobility and trapping. The presence of macrophytes along the edges provided an input of organic matter that enhanced Cu and Zn scavenging. This edge effect resulted in a two-fold increase in Cu and Zn concentrations in the sediment deposited near the banks of the lagoons, thus confirming the importance of vegetation for the retention of Cu and Zn in lagooning systems. Copyright © 2013 Elsevier Ltd. All rights reserved.

Temporal stability of otolith elemental fingerprints discriminates among lagoon nursery habitats

NASA Astrophysics Data System (ADS)

Tournois, Jennifer; Ferraton, Franck; Velez, Laure; McKenzie, David J.; Aliaume, Catherine; Mercier, Lény; Darnaude, Audrey M.

2013-10-01

The chemical composition of fish otoliths reflects that of the water masses that they inhabit. Otolith elemental compositions can, therefore, be used as natural tags to discriminate among habitats. However, for retrospective habitat identification to be valid and reliable for any adult, irrespective of its age, significant differences in environmental conditions, and therefore otolith signatures, must be temporally stable within each habitat, otherwise connectivity studies have to be carried out by matching year-classes to the corresponding annual fingerprints. This study investigated how various different combinations of chemical elements in otoliths could distinguish, over three separate years, between four coastal lagoon habitats used annually as nurseries by gilthead sea bream (Sparus aurata L.) in the Gulf of Lions (NW Mediterranean). A series of nine elements were measured in otoliths of 301 S. aurata juveniles collected in the four lagoons in 2008, 2010 and 2011. Percentages of correct re-assignment of juveniles to their lagoon of origin were calculated with the Random Forest classification method, considering every possible combination of elements. This revealed both spatial and temporal variations in accuracy of habitat identification, with correct re-assignment to each lagoon ranging from 44 to 99% depending on the year and the lagoon. There were also annual differences in the combination of elements that provided the best discrimination among the lagoons. Despite this, when the data from the three years were pooled, a combination of eight elements (B, Ba, Cu, Li, Mg, Rb, Sr and Y) provided greater than 70% correct re-assignment to each single lagoon, with a multi-annual global accuracy of 79%. When considering the years separately, discrimination accuracy with these elemental fingerprints was above 90% for 2008 and 2010. It decreased to 61% in 2011, when unusually heavy rainfall occurred, which presumably reduced chemical differences among several of the

Biogeochemical responses of shallow coastal lagoons to Climate Change

NASA Astrophysics Data System (ADS)

Brito, A.; Newton, A.; Tett, P.; Fernandes, T.

2009-04-01

The importance of climate change and global warming in the near future is becoming consensual within the scientific community (e.g. Kerr et al., 2008; Lloret et al., 2008). The surface temperature and sea level have increased during the last few years in the northern hemisphere (IPCC, 2007). Predictions for future changes include an increase of surface temperature and sea level for Europe. Moreover, the global warming phenomenon will also change the hydrological cycle and increase precipitation in northern and central Europe (IPCC, 2007). Sea level rise already threatens to overwhelm some lagoons, such as Venice and Moroccan lagoons (Snoussi et al., 2008). Shallow coastal lagoons are some of the most vulnerable systems that will be impacted by these changes (Eisenreich, 2005). Environmental impacts on coastal lagoons include an increase of water turbidity and therefore light attenuation. If these effects are strong enough, the lighted bottoms of shallow lagoons may loose a significant part of the benthic algal community. These communities are highly productive and are essential to control nutrient dynamics of the system by uptaking large amounts of nutrients both from the water column and from the sediments. A decrease in benthic algal communities and photosynthetic oxygen production will also contribute to increasing the vulnerability of the lagoons to hypoxia and anoxia. The flux of nutrients such as phosphate from the sediments may increase dramatically, further disrupting the nutrient balance and condition and promoting cyanobacterial blooms. Microbial activity is temperature dependent, therefore, the increase of temperature will increase the concentrations of ammonium within sediments. The release of phosphate and silicate will also increase with temperature. Coastal lagoons are valuable ecosystems and may be severely impacted, both ecologically and economically, by global change. Shallow coastal lagoons should be considered as sentinel systems and should be

The natural history of West Nile virus infection presenting with West Nile virus meningoencephalitis in a man with a prolonged illness: a case report.

PubMed

Mainali, Shraddha; Afshani, Mansoor; Wood, James B; Levin, Michael C

2011-05-25

Estimates indicate that West Nile virus infects approximately one and a half million people in the United States of America. Up to 1% may develop West Nile virus neuroinvasive disease, in which infected patients develop any combination of meningitis, encephalitis, or acute paralysis. A 56-year-old African-American man presented to our hospital with headache, restlessness, fever, myalgias, decreased appetite, and progressive confusion. A cerebrospinal fluid examination showed mild leukocytosis and an elevated protein level. Testing for routine infections was negative. Brain T2-weighted magnetic resonance imaging scans showed marked enlargement of caudate nuclei and increased intensity within the basal ganglia and thalami. A West Nile virus titer was positive, and serial brain magnetic resonance imaging scans showed resolving abnormalities that paralleled his neurological examination. This report is unusual as it portrays the natural history and long-term consequences of West Nile virus meningoencephalitis diagnosed on the basis of serial brain images.

Agricultural Model for the Nile Basin Decision Support System

NASA Astrophysics Data System (ADS)

van der Bolt, Frank; Seid, Abdulkarim

2014-05-01

To analyze options for increasing food supply in the Nile basin the Nile Agricultural Model (AM) was developed. The AM includes state-of-the-art descriptions of biophysical, hydrological and economic processes and realizes a coherent and consistent integration of hydrology, agronomy and economics. The AM covers both the agro-ecological domain (water, crop productivity) and the economic domain (food supply, demand, and trade) and allows to evaluate the macro-economic and hydrological impacts of scenarios for agricultural development. Starting with the hydrological information from the NileBasin-DSS the AM calculates the available water for agriculture, the crop production and irrigation requirements with the FAO-model AquaCrop. With the global commodity trade model MAGNET scenarios for land development and conversion are evaluated. The AM predicts consequences for trade, food security and development based on soil and water availability, crop allocation, food demand and food policy. The model will be used as a decision support tool to contribute to more productive and sustainable agriculture in individual Nile countries and the whole region.

LANDSAT imagery of the Venetian Lagoon: A multitemporal analysis

NASA Technical Reports Server (NTRS)

Alberotanza, L.; Zandonella, A. (Principal Investigator)

1980-01-01

The use of LANDSAT multispectral scanner images from 1975 to 1979 to determine pollution dispersion in the central basin of the lagoon under varying tidal conditions is described. Images taken during the late spring and representing both short and long range tidal dynamics were processed for partial haze removal and removal of residual striping. Selected spectral bands were correlated to different types of turbid water. The multitemporal data was calibrated, classified considering sea truth data, and evaluated. The classification differentiated tide diffusion, algae belts, and industrial, agricultural, and urban turbidity distributions. Pollution concentration is derived during the short time interval between inflow and outflow and from the distance between the two lagoon inlets and the industrial zones. Increasing pollution of the lagoon is indicated.

Benthic foraminifera as indicators of habitat in a Mediterranean delta: implications for ecological and palaeoenvironmental studies

NASA Astrophysics Data System (ADS)

Benito, Xavier; Trobajo, Rosa; Cearreta, Alejandro; Ibáñez, Carles

2016-10-01

The ecology and modern distribution of benthic foraminiferal assemblages were analysed in the Ebro Delta (NW Mediterranean Sea). Foraminiferal distributions were from 191 sediment surface samples covering a wide range of deltaic habitats and adjacent open sea areas. According to similarity in species composition, cluster analysis identified four habitat types: (1) offshore habitat, (2) nearshore and outer bays, (3) salt and brackish marshes and (4) coastal lagoons and inner bays. Canonical Correspondence Analysis identified water depth, salinity and sand content as the main environmental factors structuring living foraminiferal assemblages. Partial Canonical Correspondence Analysis revealed water depth as the most statistically significant associated with the distribution of modern foraminifera in the Ebro Delta. Thus, a transfer function for water depth using Weighted Average Partial Least Squares regression was successfully developed. Although depth per se is unlikely to affect the foraminifera directly but will exert its effects via various environmental variables that co-vary with depth in the deltaic habitats (e.g. hydrodynamics, oxygen, food availability, etc), the resulting model (r2 = 0.89; RMSEP = 0.32 log10 m) suggested a strong correlation between observed and foraminifera-predicted water depths, and therefore provided a potentially useful tool for water-depth reconstructions in the Ebro Delta. This work indicated the potential role of modern foraminifera as quantitative indicators of water depth and habitat types in the Ebro Delta. This complementary approach (transfer function and indicator species) will allow reconstruction of the palaeoenvironmental changes that have occurred in the Ebro Delta based on the benthic foraminiferal record.

Water balance dynamics in the Nile Basin

USGS Publications Warehouse

Senay, Gabriel B.; Asante, Kwabena; Artan, Guleid A.

2009-01-01

Understanding the temporal and spatial dynamics of key water balance components of the Nile River will provide important information for the management of its water resources. This study used satellite-derived rainfall and other key weather variables derived from the Global Data Assimilation System to estimate and map the distribution of rainfall, actual evapotranspiration (ETa), and runoff. Daily water balance components were modelled in a grid-cell environment at 0·1 degree (∼10 km) spatial resolution for 7 years from 2001 through 2007. Annual maps of the key water balance components and derived variables such as runoff and ETa as a percent of rainfall were produced. Generally, the spatial patterns of rainfall and ETa indicate high values in the upstream watersheds (Uganda, southern Sudan, and southwestern Ethiopia) and low values in the downstream watersheds. However, runoff as a percent of rainfall is much higher in the Ethiopian highlands around the Blue Nile subwatershed. The analysis also showed the possible impact of land degradation in the Ethiopian highlands in reducing ETa magnitudes despite the availability of sufficient rainfall. Although the model estimates require field validation for the different subwatersheds, the runoff volume estimate for the Blue Nile subwatershed is within 7·0% of a figure reported from an earlier study. Further research is required for a thorough validation of the results and their integration with ecohydrologic models for better management of water and land resources in the various Nile Basin ecosystems.

Eutrophication Process on Coastal Lagoons of North of Sinaloa, Mexico

NASA Astrophysics Data System (ADS)

Escobedo-Urias, D.; Martinez-Lopez, A.

2007-05-01

Coastal ecosystems in the Gulf of California support diverse and important fisheries and are reservoirs of great biological diversity. In northern Sinaloa, population growth and development, as well as increased use of these natural systems for recreation, has substantially increased the pressure placed upon marine resources. Discharge of untreated wastewaters generated by diverse human activities has been notably altered its health and integrity, principally along the lagoon's eastern shore In the late 60s, agriculture moved into a dominant role in coastal northern Sinaloa. The coastal plain encompasses more than 200,000 hectares under cultivation that now introduces large amounts of organic material, pesticides, heavy metals, and fertilizers into the lagoon systems of Topolobampo and San Ignacio-Navachiste-Macapule System at drainage discharge points and a minor grade in Colorado Lagoon. These lagoons are shallow and exhibit low water quality, lost of lagoon depth, presence of toxic substances (heavy metals) near the discharge points of wastewaters, and presence of harmful algal blooms. With the aim of evaluate the nutrients loadings (wastewaters, groundwaters) and their effects on the coastal lagoons of north of Sinaloa, the preliminary analysis of the physical, chemical and biologic variables data series are analyzed. From 1987-2007 eutrophication process is identified in Topolobampo Complex show increase tendency in annual average concentrations of DIN (Dissolved Inorganic Nitrogen= NO2+NO3) from 0.5 μ M in 1987 to 2.7 μ M in 2006. Trophic Index (TRIX) values, low nutrient ratios (N: P and N: Si) and the phytoplanktonic community structure support this result. Preliminary results of nutrients loadings show a mayor contribution of wastewaters into the coastal zone.

Copper complexation capacity in surface waters of the Venice Lagoon.

PubMed

Delgadillo-Hinojosa, Francisco; Zirino, Alberto; Nasci, Cristina

2008-10-01

Total copper (Cu(T)), copper ion activity (pCu) and the copper complexation capacity (CuCC) were determined in samples of seawater collected in July 2003 from the Venice Lagoon. Cu(T) and CuCC showed considerable spatial variability: Cu(T) ranged from 1.8 to 70.0nM, whereas the CuCC varied from 195 to 573nM. pCu values varied from 11.6 to 12.6 and are consistent with those previously reported in estuarine and coastal areas (10.9-14.1). The range of Cu(T) values compares well with those reported in the past in the lagoon and in the adjacent Adriatic Sea. The highest concentrations of Cu(T) were found in samples collected near the industrial area of Porto Marghera, whereas the lowest were measured near the Chioggia and Malamocco inlets, where an intense tidally-driven renewal of seawater takes place. Although CuCC showed a high degree of spatial variability, the values recorded in the Venice Lagoon are comparable to those reported in other estuarine systems. In addition, CuCC was positively correlated with dissolved organic carbon (DOC), suggesting that organic ligands responsible for Cu complexation are part of the bulk organic matter pool in the lagoon. The CuCC:Cu(T) molar ratio was, on average 55:1, indicating that a large excess of complexation capacity exists in the Venice Lagoon. The high levels of CuCC and the narrow range of pCu indicates the importance of the role played by organic ligands in controlling the free ion Cu concentrations in the lagoon, and as a consequence, regulating its availability and/or toxicity.

Hydrology and Salt Balance in a Large, Hypersaline Coastal Lagoon: Lagoa de Araruama, Brazil

NASA Astrophysics Data System (ADS)

Kjerfve, Björn; Schettini, C. A. F.; Knoppers, Bastiaan; Lessa, Guilherme; Ferreira, H. O.

1996-06-01

Lagoa de Araruama in the state of Rio de Janeiro, Brazil, is a hypersaline coastal lagoon as a result of semi-arid climate conditions, a small drainage basin and a choked entrance channel. The lagoon has been continuously hypersaline for at least 4·5 centuries, but the mean salinity has varied substantially. It has recently decreased from 57 to 52 as indicated by density (salinity) measurements between 1965 and 1990. Analysis of more than 20 years of salinity time series data, in addition to monthly lagoon cruises to measure the spatial salinity distribution, indicate that the lagoon salinity largely fluctuates in response to the difference between evaporation and precipitation. The major factor explaining the long-term trend of decreasing salinity in the lagoon is the constant pumping of 1 m 3s -1of freshwater to the communities surrounding the lagoon from an adjacent watershed, and subsequent discharge of this water into Lagoa de Araruama. The net salt budget is primarily a balance between the advective import of salt from the coastal ocean and eddy diffusive export of salt to the ocean, although the extensive mining of salt from the lagoon during past decades is also a small but significant contribution to the salt budget. The flushing half-life is proposed as a useful time scale of water exchange, is calculated based on a combination of hydrological and tidal processes, and is excellent for comparison of lagoons and assessing water quality changes. The flushing half-life measures 83·5 days for Lagoa de Araruama, considerably longer than for most other coastal lagoons. The proposed dredging of a second ocean channel to Lagoa de Araruama is probably not a good idea. It is likely to accelerate the decrease of lagoon salinity and somewhat improve the lagoon water exchange. At the same time, this will eliminate the apparent buffering capacity provided by the hypersaline environment, and thus may potentially cause water quality problems.

Consistency of temporal and habitat-related differences among assemblages of fish in coastal lagoons

NASA Astrophysics Data System (ADS)

Gray, Charles A.; Rotherham, Douglas; Johnson, Daniel D.

2011-12-01

The consistency of habitat-related differences in coastal lagoon fish assemblages was assessed across different spatial and temporal scales. Multimesh gillnets were used to sample assemblages of fish on a monthly basis for 1-year in three habitats (shallow seagrass, shallow bare and deep substrata) at two locations (>1 km apart), in each of two coastal lagoons (approximately 500 km apart), in southeastern Australia. A total of 48 species was sampled with 34 species occurring in both lagoons and in all three habitats; species caught in only one lagoon or habitat occurred in low numbers. Ten species dominated assemblages and accounted for more than 83% of all individuals sampled. In both lagoons, assemblages in the deep habitat consistently differed to those in the shallow strata (regardless of habitat). Several species were caught more frequently or in larger numbers in the deep habitat. Assemblages in the two shallow habitats did not differ consistently and were dominated by the same species and sizes of fish, possibly due to habitat heterogeneity and the scale and method of sampling. Within each lagoon, very few between location differences in assemblages within each habitat were observed. Consistent differences in assemblages were detected between lagoons for the shallow bare and deep habitats, indicating there were some intrinsic differences in ichthyofauna between lagoons. Assemblages in spring differed to those in summer, which differed to those in winter for the shallow bare habitat in both lagoons, and the deep habitat in only one lagoon. Fish-habitat relationships are complex and differences in the fish fauna between habitats were often temporally inconsistent. This study highlights the need for greater testing of habitat relationships in space and time to assess the generality of observations and to identify the processes responsible for structuring assemblages.

Sustainability assessment of traditional fisheries in Cau Hai lagoon (South China Sea).

PubMed

Marconi, Michele; Sarti, Massimo; Marincioni, Fausto

2010-01-01

Overfishing and progressive environmental degradation of the Vietnamese Cau Hai coastal lagoon appear to be threatening the ecological integrity and water quality of the largest estuarine complex of Southeast Asia. This study assessed the relationships between the density of traditional fisheries and organic matter sedimentary contents in Cau Hai lagoon. Data revealed that the density of stake traps (the most common fishing gear used in this lagoon), decreasing hydrodynamic energy in shallow water, causes the accumulation of a large fraction of organic matter refractory to degradation. The relationship between biopolymeric carbon (a proxy of availability of organic matter) and stake traps density fits a S-shape curve. The logistic equation calculated a stake traps density of 90 m of net per hectare, as the threshold over which maximum accumulation of organic matter occurs in Cau Hai. With such level of stake trap density, and assuming a theoretical stationary status of the lagoon, the time necessary for the system to reach hypoxic conditions has been calculated to be circa three weeks. We recommend that this density threshold should not be exceeded in the Cau Hai lagoon and that further analyses of organic loads in the sediment should be conducted to monitor the trophic conditions of this highly eutrophicated lagoon. 2010 Elsevier Ltd. All rights reserved.

Microbial community analysis of swine wastewater anaerobic lagoons by next-generation DNA sequencing.

PubMed

Ducey, Thomas F; Hunt, Patrick G

2013-06-01

Anaerobic lagoons are a standard practice for the treatment of swine wastewater. This practice relies heavily on microbiological processes to reduce concentrated organic material and nutrients. Despite this reliance on microbiological processes, research has only recently begun to identify and enumerate the myriad and complex interactions that occur in this microbial ecosystem. To further this line of study, we utilized a next-generation sequencing (NGS) technology to gain a deeper insight into the microbial communities along the water column of four anaerobic swine wastewater lagoons. Analysis of roughly one million 16S rDNA sequences revealed a predominance of operational taxonomic units (OTUs) classified as belonging to the phyla Firmicutes (54.1%) and Proteobacteria (15.8%). At the family level, 33 bacterial families were found in all 12 lagoon sites and accounted for between 30% and 50% of each lagoon's OTUs. Analysis by nonmetric multidimensional scaling (NMS) revealed that TKN, COD, ORP, TSS, and DO were the major environmental variables in affecting microbial community structure. Overall, 839 individual genera were classified, with 223 found in all four lagoons. An additional 321 genera were identified in sole lagoons. The top 25 genera accounted for approximately 20% of the OTUs identified in the study, and the low abundances of most of the genera suggests that most OTUs are present at low levels. Overall, these results demonstrate that anaerobic lagoons have distinct microbial communities which are strongly controlled by the environmental conditions present in each individual lagoon. Published by Elsevier Ltd.

Future evolution of a tidal inlet due to changes in wave climate, Sea level and lagoon morphology (Óbidos lagoon, Portugal)

NASA Astrophysics Data System (ADS)

Bruneau, Nicolas; Fortunato, André B.; Dodet, Guillaume; Freire, Paula; Oliveira, Anabela; Bertin, Xavier

2011-11-01

Tidal inlets are extremely dynamic, as a result of an often delicate balance between the effects of tides, waves and other forcings. Since the morphology of these inlets can affect navigation, water quality and ecosystem dynamics, there is a clear need to anticipate their evolution in order to promote adequate management decisions. Over decadal time scales, the position and size of tidal inlets are expected to evolve with the conditions that affect them, for instance as a result of climate change. A process-based morphodynamic modeling system is validated and used to analyze the effects of sea level rise, an expected shift in the wave direction and the reduction of the upper lagoon surface area by sedimentation on a small tidal inlet (Óbidos lagoon, Portugal). A new approach to define yearly wave regimes is first developed, which includes a seasonal behavior, random inter-annual variability and the possibility to extrapolate trends. Once validated, this approach is used to produce yearly time series of wave spectra for the present and for the end of the 21st century, considering the local rotation trends computed using hindcast results for the past 57 years. Predictions of the mean sea level for 2100 are based on previous studies, while the bathymetry of the upper lagoon for the same year is obtained by extrapolation of past trends. Results show, and data confirm, that the Óbidos lagoon inlet has three stable configurations, largely determined by the inter-annual variations in the wave characteristics. Both sea level rise and the reduction of the lagoon surface area will promote the accretion of the inlet. In contrast, the predicted rotation of the wave regime, within foreseeable limits, will have a negligible impact on the inlet morphology.

Groundwater and porewater as a major source of alkalinity to a fringing coral reef lagoon (Muri Lagoon, Cook Islands)

NASA Astrophysics Data System (ADS)

Cyronak, T.; Santos, I. R.; Erler, D. V.; Eyre, B. D.

2012-11-01

To better predict how ocean acidification will affect coral reefs, it is important to understand how biogeochemical cycles on reefs alter carbonate chemistry over various temporal and spatial scales. This study quantifies the contribution of fresh groundwater discharge (as traced by radon) and shallow porewater exchange (as quantified from advective chamber incubations) to total alkalinity (TA) dynamics on a fringing coral reef lagoon along the southern Pacific island of Rarotonga over a tidal and diel cycle. Benthic alkalinity fluxes were affected by the advective circulation of water through permeable sediments, with net daily flux rates of carbonate alkalinity ranging from -1.55 to 7.76 mmol m-2 d-1, depending on the advection rate. Submarine groundwater discharge (SGD) was a source of TA to the lagoon, with the highest flux rates measured at low tide, and an average daily TA flux of 1080 mmol m-2 d-1. Both sources of TA were important on a reef wide basis, although SGD acted solely as a delivery mechanism of TA to the lagoon, while porewater advection was either a sink or source of TA dependant on the time of day. On a daily basis, groundwater can contribute approximately 70% to 80% of the TA taken up by corals within the lagoon. This study describes overlooked sources of TA to coral reef ecosystems that can potentially alter water-column carbonate chemistry. We suggest that porewater and groundwater fluxes of TA should be taken into account in ocean acidification models in order to properly address changing carbonate chemistry within coral reef ecosystems.

Residence times in a hypersaline lagoon: Using salinity as a tracer

NASA Astrophysics Data System (ADS)

Mudge, Stephen M.; Icely, John D.; Newton, Alice

2008-04-01

Generally the waters of the Ria Formosa Lagoon, Portugal have a short residence time, in the order of 0.5 days (Tett, P., Gilpin, L., Svendsen, H., Erlandsson, C.P., Larsson, U., Kratzer, S., Fouilland, E., Janzen, C., Lee, J., Grenz, C., Newton, A., Ferreira, J.G., Fernandes, T., Scory, S., 2003. Eutrophication and some European waters of restricted exchange. Continental Shelf Research 23, 1635-1671). This estimation is based on the measurements of currents and the modelling of water exchange at the outlets to the ocean. However, observations of the temperature and salinity in the inner channels imply that residence time is greater in these regions of the lagoon. To resolve this apparent contradiction, spatial measurements of the temperature and salinity were made with a meter for conductivity, temperature and depth along the principal channels of the western portion of the lagoon, with a sampling frequency of two per second. Evaporation rates of 5.4 mm day -1 were measured in a salt extraction pond adjacent to the lagoon and used to determine the residence time through salinity differences with the incoming seawater. In June 2004, the water flooding in from the ocean had an average salinity of 36.07 which contrasted with a maximum of 37.82 at mid ebb on a spring tide, corresponding to a residence time of >7 days; the mean residence time was 2.4 days. As the tide flooded into the channels, the existing water was advected back into the lagoon. Although there was a small amount of mixing with water from another inlet, the water body from the inner lagoon essentially remained distinct with respect to temperature and salinity characteristics. The residence time of the water was further prolonged at the junction between the main channels, where distinct boundaries were observed between the different water masses. As the water ebbed out, the shallow Western Channel was essentially isolated from the rest of the outer lagoon, and the water from this channel was forced

The first human case of neuroinvasive West Nile virus infection identified in Cyprus.

PubMed

Paphitou, Niki I; Tourvas, Aristomenis; Floridou, Dora; Richter, Jan; Tryfonos, Christina; Christodoulou, Christina

West Nile virus infection can pose a diagnostic challenge to clinicians, especially in geographic areas where human cases of this disease have never been encountered before. In August 2016, the first human case of West Nile virus infection was diagnosed in Cyprus. An elderly non immunosuppressed patient with a history of recent travel, presented with a clinical picture of rapidly progressing ascending paralysis mimicking Guillain-Barré syndrome. Neuroinvasive West Nile virus disease was diagnosed by detecting West Nile virus nucleic acid in the patient's cerebrospinal fluid. Public health measures were taken raising awareness regarding this disease and its prevention. Clinical vigilance to consider West Nile virus as a possible emerging pathogen in the appropriate clinical setting is warranted and could benefit individual patients. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Purpura fulminans associated with acute West Nile virus encephalitis.

PubMed

Shah, Sheevam; Fite, Laura Paul; Lane, Natalie; Parekh, Palak

2016-02-01

Purpura fulminans is a progressive thrombotic disorder that presents with widespread purpura due to deficiency or dysfunction of protein C or protein S. Lesions present as well-demarcated erythematous macules that progress to irregular areas of hemorrhagic necrosis.West Nile virus is a member of the Flaviviridae family transmitted to humans through the bite of various mosquito species. It manifests as West Nile fever in 25% of those infected and less commonly as neuroinvasive disease. An African American man in his fortiespresented with altered mental status and was noted to have evidence of disseminated intravascular coagulation according to his lab data. He then developed dusky skin discoloration and systemic flaccid bullae with desquamation. Biopsy was consistent with purpura fulminans and the patient eventually developed symmetric peripheral gangrene, requiring amputations of all four extremities. Infectious work up revealed positive testing for IgM and IgG antibodies in serum and cerebrospinal fluid leading to the diagnosis of acute West Nile Virus encephalitis. We present this case to describe the rarely reported association of purpura fulminans with West Nile Virus infection. Copyright © 2015 Elsevier B.V. All rights reserved.

Subtidal hydrodynamics in a tropical lagoon: A dimensionless numbers approach

NASA Astrophysics Data System (ADS)

Tenorio-Fernandez, L.; Valle-Levinson, A.; Gomez-Valdes, J.

2018-01-01

Observations in a tropical lagoon of the Yucatan peninsula motivated a non-dimensional number analysis to examine the relative influence of tidal stress, density gradients and wind stress on subtidal hydrodynamics. A two-month observation period in Chelem Lagoon covered the transition from the dry to the wet season. Chelem Lagoon is influenced by groundwater inputs and exhibits a main sub-basin (central sub-basin), a west sub-basin and an east sub-basin. Subtidal hydrodynamics were associated with horizontal density gradients that were modified seasonally by evaporation, precipitation, and groundwater discharge. A tidal Froude number (Fr0), a Wedderburn number (W), and a Stress ratio (S0) were used to diagnose the relative importance of dominant subtidal driving forces. The Froude number (Fr0) compares tidal forcing and baroclinic forcing through the ratio of tidal stress to longitudinal baroclinic pressure gradient. The Wedderburn number (W) relates wind stress to baroclinicity. The stress ratio (S0) sizes tidal stress and wind stress. S0 is a new diagnostic tool for systems influenced by tides and winds, and represents the main contribution of this research. Results show that spring-tide subtidal flows in the tropical lagoon had log(Fr0) ≫ 0 and log(S0) > 0 , i.e., driven mainly by tidal stresses (advective accelerations). Neap tides showed log(Fr0) ≪ 0 and log(S0) < 0) , i.e., flows driven by baroclinicity, especially at the lagoon heads of the east and west sub-basins. However, when the wind stress intensified over the lagoon, the relative importance of baroclinicity decreased and the wind stress controlled the dynamics (log(W) ≫ 0). Each sub-basin exhibited a different subtidal response, according to the dimensionless numbers. The response depended on the fortnightly tidal cycle, the location and magnitude of groundwater input, and the direction and magnitude of the wind stress.

Phylogenetic analysis of West Nile virus, Nuevo Leon State, Mexico.

PubMed

Blitvich, Bradley J; Fernández-Salas, Ildefonso; Contreras-Cordero, Juan F; Loroño-Pino, María A; Marlenee, Nicole L; Díaz, Francisco J; González-Rojas, José I; Obregón-Martínez, Nelson; Chiu-García, Jorge A; Black, William C; Beaty, Barry J

2004-07-01

West Nile virus RNA was detected in brain tissue from a horse that died in June 2003 in Nuevo Leon State, Mexico. Nucleotide sequencing and phylogenetic analysis of the premembrane and envelope genes showed that the virus was most closely related to West Nile virus isolates collected in Texas in 2002.

Spatial and temporal variation of water quality in the coastal lagoons of Sinaloa

NASA Astrophysics Data System (ADS)

Paez-Osuna, F.; Lopez-Aguiar, L. K.; Del Río-Chuljak, A.; Ruiz-Fernandez, A. C.

2007-05-01

The Mexican state of Sinaloa has 656 km of coastline and 221,600 ha of coastal lagoons, and is characterized by a high fishing and agriculture activity. It is well known that agricultural activities constitute a major factor affecting the water quality in the coastal waters. The current study focused on the 6 more important coastal lagoons of Sinaloa (Topolobampo-Ohuira-Santa María, Navachiste-San Ignacio-Macapule, Santa María-La Reforma, Altata-Ensenada del Pabellón, Ceuta and Teacapán-Agua Brava) with the aim to evaluate the water quality spatial and temporal variation at the lagoons (physico-chemical parameters, nutrients (N, P and Si), dissolved oxygen, total suspended solids and chlorophyll a) and to assess its eutrophication status. The water samples were collected in several stations at each lagoon (between 9 and 23 stations depending on the lagoon area) at low and high tides, during three different weather periods (dry-warm, rainy and dry-cold seasons) between May 2004 and April 2005. Mean concentrations of nutrients (μM), dissolved oxygen (mg/L) and chlorophyll a (mg/m3) obtained for each variable were comparable between lagoons (total N=51±45; total P= 2.5±1.5; Si=23±31; DO=6.7±1.8; Chll=1.7±1.9) although seasonal and spatial differences were observed at each lagoon. The nutrient concentrations measured fell in the typical concentration intervals for coastal lagoons; however, critical sampling points were identified and related to direct discharges of untreated effluents from municipal wastes, aquaculture farms and agriculture drain ditches.

Distribution and stability of eelgrass beds at Izembek Lagoon, Alaska

USGS Publications Warehouse

Ward, David H.; Markon, Carl J.; Douglas, David C.

1997-01-01

Spatial change in eelgrass meadows, Zostera marina L., was assessed between 1978 and 1987 and between 1987 and 1995 at Izembek Lagoon, Alaska. Change in total extent was evaluated through a map to map comparison of data interpreted from a 1978 Landsat multi-spectral scanner image and 1987 black and white aerial photographs. A ground survey in 1995 was used to assess spatial change from 1987. Eelgrass beds were the predominant vegetation type in the lagoon, comprising 44-47% (15000-16000 ha) of the total area in 1978 and 1987. Izembek Lagoon contains the largest bed of seagrass along the Pacific Coast of North America and largest known single stand of eelgrass in the world. There was a high degree of overlap in the spatial distribution of eelgrass among years of change detection. The overall net change was a 6% gain between, 1978 and 1987 and a <1% gain between 1987 and 1995. The lack of significant change in eelgrass cover suggests that eelgrass meadows in Izembek Lagoon have been stable during the 17-year period of our study.

Discover the Nile River

ERIC Educational Resources Information Center

Project WET Foundation, 2009

2009-01-01

Bordering on the Fantastic. As the longest river on earth, the Nile passes through 10 countries. Presented through a wide range of activities and a winning array of games, it's also unsurpassed at taking young minds into exploring the world of water, as well as natural and man made wonders.

The high resolution mapping of the Venice Lagoon tidal network

NASA Astrophysics Data System (ADS)

Madricardo, Fantina; Foglini, Federica; Kruss, Aleksandra; Bellafiore, Debora; Trincardi, Fabio

2017-04-01

One of the biggest challenges of the direct observation of the ocean is to achieve a high resolution mapping of its seafloor morphology and benthic habitats. So far, sonars have mapped just 0.05% of the ocean floor with less than ten-meter resolution. The recent efforts of the scientific community have been devoted towards the mapping of both Deep Ocean and very shallow coastal areas. Coastal and transitional environments in particular undergo strong morphological changes due to natural and anthropogenic pressure. Nowadays, only about 5% of the seafloor of these environments † have been mapped: the shallowness of these environments has prevented the use of underwater acoustics to reveal their morphological features. The recent technological development of multibeam echosounder systems, however, enables these instruments to achieve very high performances also in such shallow environments. In this work, we present results and case studies of an extensive multibeam survey carried out in the Lagoon of Venice in 2013. The Lagoon of Venice is the biggest lagoon in the Mediterranean Sea with a surface of about 550 km2 and with an average depth of about 1 m. In the last century, the morphological and ecological properties of the lagoon changed dramatically: the surface of the salt marshes was reduced by 60% and some parts of the lagoon are deepening with a net sediment flux exiting from the inlets. Moreover, major engineering interventions are currently ongoing at the inlets (MOSE project). These changes at the inlets could affect substantially the lagoon environment. To understand and monitor the future evolution of the Lagoon of Venice, ISMAR within the project RITMARE (a National Research Programme funded by the Italian Ministry of University and Research) carried out an extensive survey, involving a team of more than 25 scientists, to collect high resolution (0.5 m) bathymetry of key study areas such as the tidal inlets and channels. Following a broad

Aspects of fish conservation in the upper Patos Lagoon basin.

PubMed

Fontoura, N F; Vieira, J P; Becker, F G; Rodrigues, L R; Malabarba, L R; Schulz, U H; Möller, O O; Garcia, A M; Vilella, F S

2016-07-01

The Patos Lagoon basin is a large (201 626 km(2) ) and complex drainage system in southern Brazil. The lagoon is 250 km long and 60 km wide, covering an area of 10 360 km(2) . The exchange of water with the Atlantic Ocean occurs through a 0·8 km wide and 15 m deep inlet, fixed by 4 km long jetties, at the southernmost part of the Patos Lagoon. The estuarine area is restricted to its southern portion (10%), although the upper limit of saline waters migrates seasonally and year to year, influenced by the wind regime and river discharge. The known number of recorded limnetic fish species is 200, but this number is expected to increase. A higher endemism is observed in fish species occurring in upper tributaries. The basin suffers from the direct impact of almost 7 million inhabitants, concentrated in small to large cities, most with untreated domestic effluents. There are at least 16 non-native species recorded in natural habitats of the Patos Lagoon basin, about half of these being from other South American river basins. Concerning the fishery, although sport and commercial fisheries are widespread throughout the Patos Lagoon basin, the lagoon itself and the estuarine area are the main fishing areas. Landing statistics are not available on a regular basis or for the whole basin. The fishery in the northern Patos Lagoon captures 31 different species, nine of which are responsible for most of the commercial catches, but only three species are actually sustaining the artisanal fishery: the viola Loricariichthys anus: 455 kg per 10 000 m(2) gillnet per day, the mullet Mugil liza: 123 kg per 10 000 m(2) gillnet per day and the marine catfish Genidens barbus: 50 kg per 10 000 m(2) gillnet per day. A decline of the fish stocks can be attributed to inadequate fishery surveillance, which leads to overfishing and mortality of juveniles, or to decreasing water quality because of urban and industrial activities and power production. Global climatic changes also represent a

Phylogenetic Analysis of West Nile Virus, Nuevo Leon State, Mexico

PubMed Central

Blitvich, Bradley J.; Fernández-Salas, Ildefonso; Contreras-Cordero, Juan F.; Loroño-Pino, María A.; Marlenee, Nicole L.; Díaz, Francisco J.; González-Rojas, José I.; Obregón-Martínez, Nelson; Chiu-García, Jorge A.; Black, William C.

2004-01-01

West Nile virus RNA was detected in brain tissue from a horse that died in June 2003 in Nuevo Leon State, Mexico. Nucleotide sequencing and phylogenetic analysis of the premembrane and envelope genes showed that the virus was most closely related to West Nile virus isolates collected in Texas in 2002. PMID:15324558

Marshall Islands Fringing Reef and Atoll Lagoon Observations of the Tohoku Tsunami

NASA Astrophysics Data System (ADS)

Ford, Murray; Becker, Janet M.; Merrifield, Mark A.; Song, Y. Tony

2014-12-01

The magnitude 9.0 Tohoku earthquake on 11 March 2011 generated a tsunami which caused significant impacts throughout the Pacific Ocean. A description of the tsunami within the lagoons and on the surrounding fringing reefs of two mid-ocean atoll islands is presented using bottom pressure observations from the Majuro and Kwajalein atolls in the Marshall Islands, supplemented by tide gauge data in the lagoons and by numerical model simulations in the deep ocean. Although the initial wave arrival was not captured by the pressure sensors, subsequent oscillations on the reef face resemble the deep ocean tsunami signal simulated by two numerical models, suggesting that the tsunami amplitudes over the atoll outer reefs are similar to that in deep water. In contrast, tsunami oscillations in the lagoon are more energetic and long lasting than observed on the reefs or modelled in the deep ocean. The tsunami energy in the Majuro lagoon exhibits persistent peaks in the 30 and 60 min period bands that suggest the excitation of closed and open basin normal modes, while energy in the Kwajalein lagoon spans a broader range of frequencies with weaker, multiple peaks than observed at Majuro, which may be associated with the tsunami behavior within the more irregular geometry of the Kwajalein lagoon. The propagation of the tsunami across the reef flats is shown to be tidally dependent, with amplitudes increasing/decreasing shoreward at high/low tide. The impact of the tsunami on the Marshall Islands was reduced due to the coincidence of peak wave amplitudes with low tide; however, the observed wave amplitudes, particularly in the atoll lagoon, would have led to inundation at different tidal phases.

Nile Red Detection of Bacterial Hydrocarbons and Ketones in a High-Throughput Format

PubMed Central

Pinzon, Neissa M.; Aukema, Kelly G.; Gralnick, Jeffrey A.; Wackett, Lawrence P.

2011-01-01

ABSTRACT A method for use in high-throughput screening of bacteria for the production of long-chain hydrocarbons and ketones by monitoring fluorescent light emission in the presence of Nile red is described. Nile red has previously been used to screen for polyhydroxybutyrate (PHB) and fatty acid esters, but this is the first report of screening for recombinant bacteria making hydrocarbons or ketones. The microtiter plate assay was evaluated using wild-type and recombinant strains of Shewanella oneidensis and Escherichia coli expressing the enzyme OleA, previously shown to initiate hydrocarbon biosynthesis. The strains expressing exogenous Stenotrophomonas maltophilia oleA, with increased levels of ketone production as determined by gas chromatography-mass spectrometry, were distinguished with Nile red fluorescence. Confocal microscopy images of S. oneidensis oleA-expressing strains stained with Nile red were consistent with a membrane localization of the ketones. This differed from Nile red staining of bacterial PHB or algal lipid droplets that showed intracellular inclusion bodies. These results demonstrated the applicability of Nile red in a high-throughput technique for the detection of bacterial hydrocarbons and ketones. PMID:21712420

Sedimentary environment and facies of St Lucia Estuary Mouth, Zululand, South Africa

NASA Astrophysics Data System (ADS)

Wright, C. I.; Mason, T. R.

The St. Lucia Estuary is situated on the subtropical, predominantly microtidal Zululand coast. Modern sedimentary environments within the estuary fall into three categories: (1) barrier environments; (2) abandoned channel environments; and (3) estuarine/lagoonal environments. The barrier-associated environment includes tidal inlet channel, inlet beach face, flood-tidal delta, ebb-tidal delta, spit, backspit and aeolian dune facies. The abandoned channel environment comprises washover fan, tidal creek tidal creek delta and back-barrier lagoon facies. The estuarine/lagoonal environment includes subtidal estuarine channel, side-attached bar, channel margin, mangrove fringe and channel island facies. Each sedimentary facies is characterised by sedimentary and biogenic structures, grain-size and sedimentary processes. Vertical facies sequences produced by inlet channel migration and lagoonal infilling are sufficiently distinct to be recognized in the geological record and are typical of a prograding shoreline.

DELTAS: A new Global Delta Sustainability Initiative (Invited)

NASA Astrophysics Data System (ADS)

Foufoula-Georgiou, E.

2013-12-01

Deltas are economic and environmental hotspots, food baskets for many nations, home to a large part of the world population, and hosts of exceptional biodiversity and rich ecosystems. Deltas, being at the land-water interface, are international, regional, and local transport hubs, thus providing the basis for intense economic activities. Yet, deltas are deteriorating at an alarming rate as 'victims' of human actions (e.g. water and sediment reduction due to upstream basin development), climatic impacts (e.g. sea level rise and flooding from rivers and intense tropical storms), and local exploration (e.g. sand or aggregates, groundwater and hydrocarbon extraction). Although many efforts exist on individual deltas around the world, a comprehensive global delta sustainability initiative that promotes awareness, science integration, data and knowledge sharing, and development of decision support tools for an effective dialogue between scientists, managers and policy makers is lacking. Recently, the international scientific community proposed to establish the International Year of Deltas (IYD) to serve as the beginning of such a Global Delta Sustainability Initiative. The IYD was proposed as a year to: (1) increase awareness and attention to the value and vulnerability of deltas worldwide; (2) promote and enhance international and regional cooperation at the scientific, policy, and stakeholder level; and (3) serve as a launching pad for a 10-year committed effort to understand deltas as complex socio-ecological systems and ensure preparedness in protecting and restoring them in a rapidly changing environment. In this talk, the vision for such an international coordinated effort on delta sustainability will be presented as developed by a large number of international experts and recently funded through the Belmont Forum International Opportunities Fund. Participating countries include: U.S., France, Germany, U.K., India, Japan, Netherlands, Norway, Brazil, Bangladesh

Hydroclimate variability in the Nile River Basin during the past 28,000 years

NASA Astrophysics Data System (ADS)

Castañeda, Isla S.; Schouten, Stefan; Pätzold, Jürgen; Lucassen, Friedrich; Kasemann, Simone; Kuhlmann, Holger; Schefuß, Enno

2016-03-01

It has long been known that extreme changes in North African hydroclimate occurred during the late Pleistocene yet many discrepancies exist between sites regarding the timing, duration and abruptness of events such as Heinrich Stadial (HS) 1 and the African Humid Period (AHP). The hydroclimate history of the Nile River is of particular interest due to its lengthy human occupation history yet there are presently few continuous archives from the Nile River corridor, and pre-Holocene studies are rare. Here we present new organic and inorganic geochemical records of Nile Basin hydroclimate from an eastern Mediterranean (EM) Sea sediment core spanning the past 28 ka BP. Our multi-proxy records reflect the fluctuating inputs of Blue Nile versus White Nile material to the EM Sea in response to gradual changes in local insolation and also capture abrupt hydroclimate events driven by remote climate forcings, such as HS1. We find strong evidence for extreme aridity within the Nile Basin evolving in two distinct phases during HS1, from 17.5 to 16 ka BP and from 16 to 14.5 ka BP, whereas peak wet conditions during the AHP are observed from 9 to 7 ka BP. We find that zonal movements of the Congo Air Boundary (CAB), and associated shifts in the dominant moisture source (Atlantic versus Indian Ocean moisture) to the Nile Basin, likely contributed to abrupt hydroclimate variability in northern East Africa during HS1 and the AHP as well as to non-linear behavior of hydroclimate proxies. We note that different proxies show variable gradual and abrupt responses to individual hydroclimate events, and thus might have different inherent sensitivities, which may be a factor contributing to the controversy surrounding the abruptness of past events such as the AHP. During the Late Pleistocene the Nile Basin experienced extreme hydroclimate fluctuations, which presumably impacted Paleolithic cultures residing along the Nile corridor.

Trace metals in sediments of two estuarine lagoons from Puerto Rico.

PubMed

Acevedo-Figueroa, D; Jiménez, B D; Rodríguez-Sierra, C J

2006-05-01

Concentrations of As, Cd, Cu, Fe, Hg, Pb and Zn were evaluated in surface sediments of two estuaries from Puerto Rico, known as San José Lagoon (SJL) and Joyuda Lagoon. Significantly higher concentrations in microg/g dw of Cd (1.8 vs. 0.1), Cu (105 vs. 22), Hg (1.9 vs. 0.17), Pb (219 vs. 8), and Zn (531 vs. 52) were found in sediment samples from SJL when compared to Joyuda Lagoon. Average concentrations of Hg, Pb, and Zn in some sediment samples from SJL were above the effect range median (ERM) that predict toxic effects to aquatic organisms. Enrichments factors using Fe as a normalizer, and correlation matrices showed that metal pollution in SJL was the product of anthropogenic sources, while the metal content in Joyuda Lagoon was of natural origins. Sediment metal concentrations found in SJL were comparable to aquatic systems classified as contaminated from other regions of the world.

West Nile Flavivirus Polioencephalomyelitis in a harbor seal (Phoca vitulina).

PubMed

Del Piero, F; Stremme, D W; Habecker, P L; Cantile, C

2006-01-01

A 12-year-old male harbor seal presented with progressive signs of neurologic dysfunction including head tremors, muzzle twitching, clonic spasms, and weakness. Lesions included polioencephalomyelitis with glial nodules, spheroids, neuronophagia, ring hemorrhages, and a few neutrophils. Neurons, fibers, and glial nodules were multifocally colonized with intracytoplasmic West Nile flavivirus antigens that were demonstrated using indirect immunohistochemical analysis. Flavivirus on cultured cells also was isolated and was identified by use of monoclonal antibodies and reverse transcriptase-polymerase chain reaction analysis. Clinical signs of disease and lesion morphology and distribution were similar to those of equine West Nile virus infection. Similar to horses, alpacas, humans, dogs, and reptiles, seals can be dead-end hosts of West Nile virus.

Project summary. PERSISTENCE OF PATHOGENS IN LAGOON-STORED SLUDGE (EPA/600/S2-89/015)

EPA Science Inventory

The project objective was to investigate pathogen inactlvation in lagoon-stored municipal sludges. The in-field lagoons were located in Louisiana (New Orleans) and in Texas (Port Aransas), both semitropical areas of the United States. Each lagoon was filled with 7.56 mL of ...

Bacterioplankton diversity and community composition in the Southern Lagoon of Venice.

PubMed

Simonato, Francesca; Gómez-Pereira, Paola R; Fuchs, Bernhard M; Amann, Rudolf

2010-04-01

The Lagoon of Venice is a large water basin that exchanges water with the Northern Adriatic Sea through three large inlets. In this study, the 16S rRNA approach was used to investigate the bacterial diversity and community composition within the southern basin of the Lagoon of Venice and at one inlet in October 2007 and June 2008. Comparative sequence analysis of 645 mostly partial 16S rRNA gene sequences indicated high diversity and dominance of Alphaproteobacteria, Gammaproteobacteria and Bacteroidetes at the lagoon as well as at the inlet station, therefore pointing to significant mixing. Many of these sequences were close to the 16S rRNA of marine, often coastal, bacterioplankton, such as the Roseobacter clade, the family Vibrionaceae, and class Flavobacteria. Sequences of Actinobacteria were indicators of a freshwater input. The composition of the bacterioplankton was quantified by catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) with a set of rRNA-targeted oligonucleotide probes. CARD-FISH counts corroborated the dominance of members of the phyla Alphaproteobacteria, Gammaproteobacteria and Bacteroidetes. When assessed by a probe set for the quantification of selected clades within Alphaproteobacteria and Gammaproteobacteria, bacterioplankton composition differed between October 2007 and June 2008, and also between the inlet and the lagoon. In particular, members of the readily culturable copiotrophic gammaproteobacterial genera Vibrio, Alteromonas and Pseudoalteromonas were enriched in the southern basin of the Lagoon of Venice. Interestingly, the alphaproteobacterial SAR11 clade and related clusters were also present in high abundances at the inlet and within the lagoon, which was indicative of inflow of water from the open sea.

Chasing boundaries and cascade effects in a coupled barrier - marshes - lagoon system

NASA Astrophysics Data System (ADS)

Lorenzo Trueba, J.; Mariotti, G.

2015-12-01

Low-lying coasts are often characterized by barriers islands, shore-parallel stretches of sand separated from the mainland by marshes and lagoons. We built an exploratory numerical model to examine the morphological feedbacks within an idealized barrier - marshes -lagoon system and predict its evolution under projected rates of sea level rise and sediment supply to the backbarrier environment. Our starting point is a recently developed morphodynamic model, which couples shoreface evolution and overwash processes in a dynamic framework. As such, the model is able to capture dynamics not reproduced by morphokinematic models, which advect geometries without specific concern to processes. These dynamics include periodic barrier retreat due to time lags in the shoreface response to barrier overwash, height drowning due to insufficient overwash fluxes as sea level rises, and width drowning, which occurs when the shoreface response rate is insufficient to maintain the barrier geometry during overwash-driven landward migration. We extended the model by coupling the barrier model with a model for the evolution of the marsh platform and the boundary between the marsh and the adjacent lagoon. The coupled model explicitly describes marsh edge processes and accounts for the modification of the wave regime associated with lagoon width (fetch). Model results demonstrate that changes in factors that are not typically associated with the dynamics of coastal barriers, such as the lagoon width and the rate of export/import of sediments from and to the lagoon, can lead to previously unidentified complex responses of the coupled system. In particular, a wider lagoon in the backbarrier, and/or a reduction in the supply of muddy sediments to the backbarrier, can increase barrier retreat rates and even trigger barrier drowning. Overall, our findings highlight the importance of incorporating backbarrier dynamics in models that aim at predicting the response of barrier systems.

Origins of hydrocarbon gas seeping out from offshore mud volcanoes in the Nile delta

NASA Astrophysics Data System (ADS)

Prinzhofer, Alain; Deville, Eric

2013-04-01

This paper discusses the origin of gas seepages (free gas or dissolved gas in ground water or brine) sampled with the Nautile submarine during the Nautinil cruise at the seafloor of the deep water area of the Nile turbiditic system on different mud volcanoes and brine pools. Generally, the gas is wet and includes C1, C2, C3, iC4, nC4, CO2. These gas samples show no evidence of biodegradation which is not the case of the gas present in the deep hydrocarbon accumulations at depth. It indicates that the gas expelled by the mud volcanoes is not issued from direct leakages from deep gas fields. The collected gas samples mainly have a thermogenic origin and show different maturities. Some samples show very high maturities indicating that these seepages are sourced from great depths, below the Messinian salt. Moreover, the different chemical compositions of the gas samples reflect not only differences in maturity but also the fact that the gas finds its origin in different deep source rocks. Carbon dioxide has an organic signature and cannot result from carbonate decomposition or mantle fluids. The crustal-derived radiogenic isotopes show that the analyzed gas samples have suffered a fractionation processes after the production of the radiogenic isotopes, due either to oil occurrence at depth interacting with the flux of gas, and/or fractionation during the fluid migration.

Impact of mussel bioengineering on fine-grained sediment dynamics in a coastal lagoon: A numerical modelling investigation

NASA Astrophysics Data System (ADS)

Forsberg, Pernille L.; Lumborg, Ulrik; Bundgaard, Klavs; Ernstsen, Verner B.

2017-12-01

Rødsand lagoon in southeast Denmark is a non-tidal coastal lagoon. It is home to a wide range of marine flora and fauna and part of the Natura 2000 network. An increase in turbidity through elevated levels of suspended sediment concentration (SSC) within the lagoon may affect the ecosystem health due to reduced light penetration. Increasing SSC levels within Rødsand lagoon could be caused by increasing storm intensity or by a sediment spill from dredging activities west of the lagoon in relation to the planned construction of the Fehmarnbelt fixed link between Denmark and Germany. The aim of the study was to investigate the impact of a mussel reef on sediment import and SSC in a semi-enclosed lagoon through the development of a bioengineering modelling application that makes it possible to include the filtrating effect of mussels in a numerical model of the lagoonal system. The numerical implementation of an exterior mussel reef generated a reduction in the SSC in the vicinity of the reef, through the adjacent inlet and in the western part of the lagoon. The mussel reef reduced the sediment import to Rødsand lagoon by 13-22% and reduced the SSC within Rødsand lagoon by 5-9% depending on the filtration rate and the reef length. The results suggest that the implementation of a mussel reef has the potential to relieve the pressure of increasing turbidity levels within a semi-enclosed lagoonal system. However, further assessment and development of the bioengineering application and resulting ecosystem impacts are necessary prior to actual implementation.

Intraspecific variation in gill morphology of juvenile Nile perch, Lates niloticus, in Lake Nabugabo, Uganda

USGS Publications Warehouse

Paterson, Jaclyn A.; Chapman, Lauren J.; Schofield, Pamela J.

2010-01-01

Several studies have demonstrated intraspecific variation in fish gill size that relates to variation in dissolved oxygen (DO) availability across habitats. In Lake Nabugabo, East Africa, ecological change over the past 12 years has coincided with a shift in the distribution of introduced Nile perch such that a larger proportion of the population now inhabits waters in or near wetland ecotones where DO is lower than in open waters of the lake. In this study, we compared gill size of juvenile Nile perch between wetland and exposed (open-water) habitats of Lake Nabugabo in 2007, as well as between Nile perch collected in 1996 and 2007. For Nile perch of Lake Nabugabo [<20 cm total length (TL)], there was a significant habitat effect on some gill traits. In general, fish from wetland habitats were characterized by a longer total gill filament length and average gill filament length than conspecifics from exposed habitats. Nile perch collected from wetland areas in 2007 had significantly larger gills (total gill filament length) than Nile perch collected in 1996, but there was no difference detected between Nile perch collected from exposed sites in 2007 and conspecifics collected in 1996.

Cairo, Egypt/Nile River viewed from STS-66 Atlantis

NASA Image and Video Library

1994-11-14

This close-up view of the intensively cultivated Nile River flood plain near Cairo presents a sharp color contrast to the virtually non-vegetated, sandy desert, located to the west of the vegetated area. Some rectangular cultivated field patterns, as well as circular center pivot irrigation patterns, can be observed northwest of the Nile River flood plain. The world famous Giza Pyramids are located near the center of this photography (see highly reflective sand surfaces).

Analysis of the unique geothermal microbial ecosystem of the Blue Lagoon.

PubMed

Petursdottir, Solveig K; Bjornsdottir, Snaedis H; Hreggvidsson, Gudmundur O; Hjorleifsdottir, Sigridur; Kristjansson, Jakob K

2009-12-01

Cultivation and culture-independent techniques were used to describe the geothermal ecosystem of the Blue Lagoon in Iceland. The lagoon contains both seawater and freshwater of geothermal origin and is extremely high in silica content. Water samples were collected repeatedly in summer and autumn in 2003 and 2005 and in winter 2006 were analyzed for species composition. The study revealed the typical traits of an extreme ecosystem characterized by dominating species and other species represented in low numbers. A total of 35 taxa were identified. The calculated biodiversity index of the samples was 2.1-2.5. The majority (83%) of analyzed taxa were closely related to bacteria of marine and geothermal origin reflecting a marine character of the ecosystem and the origin of the Blue Lagoon hydrothermal fluid. A high ratio (63%) of analyzed taxa represented putative novel bacterial species. The majority (71%) of analyzed clones were Alphaproteobacteria, of which 80% belonged to the Roseobacter lineage within the family of Rhodobacteraceae. Of seven cultivated species, the two most abundant ones belonged to this lineage. Silicibacter lacuscaerulensis was confirmed as a dominating species in the Blue Lagoon. One group of isolates represented a recently identified species within the genus of Nitratireductor within Rhizobiales. This study implies an annually stable and seasonally dynamic ecosystem in the Blue Lagoon.

Water sources, mixing and evaporation in the Akyatan lagoon, Turkey

NASA Astrophysics Data System (ADS)

Lécuyer, C.; Bodergat, A.-M.; Martineau, F.; Fourel, F.; Gürbüz, K.; Nazik, A.

2012-12-01

Akyatan lagoon, located southeast of Turkey along the Mediterranean coast, is a choked and hypersaline lagoon, and hosts a large and specific biodiversity including endangered sea turtles and migrating birds. Physicochemical properties of this lagoon were investigated by measuring temperature, salinity, and hydrogen and oxygen isotope ratios of its waters at a seasonal scale during years 2006 and 2007. Winter and spring seasons were dominated by mixing processes between freshwaters and Mediterranean seawater. The majority of spring season waters are formed by evapoconcentration of brackish water at moderate temperatures of 22 ± 2 °C. During summer, hypersaline waters result from evaporation of seawater and brackish waters formed during spring. Evaporation over the Akyatan lagoon reaches up to 76 wt% based on salinity measurements and operated with a dry (relative humidity of 0.15-0.20) and hot (44 ± 6 °C) air. These residual waters were characterized by the maximal seasonal isotopic enrichment in both deuterium and 18O relative to VSMOW. During autumn, most lagoonal waters became hypersaline and were formed by evaporation of waters that had isotopic compositions and salinities close to that of seawater. These autumnal hypersaline waters result from an air humidity close to 0.45 and an atmospheric temperature of evaporation of 35 ± 5 °C, which are responsible for up to 71 wt% of evaporation, with restricted isotopic enrichments relative to VSMOW. During the warm seasons, the combination of air humidity, wind velocity and temperature were responsible for a large kinetic component in the total isotopic fractionation between water liquid and water vapour.

Changes in sludge accumulation of anaerobic swine lagoons receiving pretreated influent

USDA-ARS?s Scientific Manuscript database

This study evaluated the changes in sludge depth and volume of anaerobic swine lagoon in North Carolina after six years of applying treatment to the liquid flushed manure prior to entering the lagoon. The farm had seven swine barns with a permitted capacity of 5,145 head feeder to finish (735 head/b...

Whiteriver Sewage Lagoons, Whiteriver, AZ: AZ0024058

EPA Pesticide Factsheets

Authorization to Discharge Under National Pollutant Discharge Elimination System (NPDES) Permit No. AZ0024058 for Tribal Utility Authority, White Mountain Apache Tribe Whiteriver Sewage Lagoons, Whiteriver, AZ.

Crystal Structure of West Nile Virus Envelope Glycoprotein Reveals Viral Surface Epitopes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kanai,R.; Kar, K.; Anthony, K.

2006-01-01

West Nile virus, a member of the Flavivirus genus, causes fever that can progress to life-threatening encephalitis. The major envelope glycoprotein, E, of these viruses mediates viral attachment and entry by membrane fusion. We have determined the crystal structure of a soluble fragment of West Nile virus E. The structure adopts the same overall fold as that of the E proteins from dengue and tick-borne encephalitis viruses. The conformation of domain II is different from that in other prefusion E structures, however, and resembles the conformation of domain II in postfusion E structures. The epitopes of neutralizing West Nile virus-specificmore » antibodies map to a region of domain III that is exposed on the viral surface and has been implicated in receptor binding. In contrast, we show that certain recombinant therapeutic antibodies, which cross-neutralize West Nile and dengue viruses, bind a peptide from domain I that is exposed only during the membrane fusion transition. By revealing the details of the molecular landscape of the West Nile virus surface, our structure will assist the design of antiviral vaccines and therapeutics.« less

delta-Hexachlorocyclohexane (delta-HCH)

Integrated Risk Information System (IRIS)

delta - Hexachlorocyclohexane ( delta - HCH ) ; CASRN 319 - 86 - 8 Human health assessment information on a chemical substance is included in the IRIS database only after a comprehensive review of toxicity data , as outlined in the IRIS assessment development process . Sections I ( Health Hazard Ass

Are Sea Surface Temperature satellite measurements reliable proxies of lagoon temperature in the South Pacific?

NASA Astrophysics Data System (ADS)

Van Wynsberge, Simon; Menkes, Christophe; Le Gendre, Romain; Passfield, Teuru; Andréfouët, Serge

2017-12-01

In remote coral reef environments, lagoon and reef in situ measurements of temperature are scarce. Sea Surface Temperature (SST) measured by satellite has been frequently used as a proxy of the lagoon temperature experienced by coral reef organisms (TL) especially during coral bleaching events. However, the link between SST and TL is poorly characterized. First, we compared the correlation between various SST series and TL from 2012 to 2016 in three atolls and one island in the Central South Pacific Ocean. Simple linear correlation between SST and TL ranged between 0.44 and 0.97 depending on lagoons, localities of sensors, and type of SST data. High-resolution-satellite-measurements of SST inside the lagoons did not outperform oceanic SST series, suggesting that SST products are not adapted for small lagoons. Second, we modelled the difference between oceanic SST and TL as a function of the drivers of lagoon water renewal and mixing, namely waves, tide, wind, and season. The multivariate models reduced significantly the bias between oceanic SST and TL. In atoll lagoons, and probably in other hydrodynamically semi-open systems, a correction taking into account these factors is necessary when SST are used to characterize organisms' thermal stress thresholds.

[Species and size composition of fishes in Barra de Navidad lagoon, Mexican central Pacific].

PubMed

González-Sansón, Gaspar; Aguilar-Betancourt, Consuelo; Kosonoy-Aceves, Daniel; Lucano-Ramírez, Gabriela; Ruiz-Ramírez, Salvador; Flores-Ortega, Juan Ramón; Hinojosa-Larios, Angel; de Asís Silva-Bátiz, Francisco

2014-03-01

Coastal lagoons are considered important nursery areas for many coastal fishes. Barra de Navidad coastal lagoon (3.76km2) is important for local economy as it supports tourism development and artisanal fisheries. However, the role of this lagoon in the dynamics of coastal fish populations is scarcely known. Thus, the objectives of this research were: to characterize the water of the lagoon and related weather conditions, to develop a systematic list of the ichthyofauna, and to estimate the proportion of juveniles in the total number of individuals captured of most abundant species. Water and fish samples were collected between March 2011 and February 2012. Physical and chemical variables were measured in rainy and dry seasons. Several fishing gears were used including a cast net, beach purse seine and gillnets of four different mesh sizes. Our results showed that the lagoon is most of the time euhaline (salinity 30-40ups), although it can be mixopolyhaline (salinity 18-30ups) during short periods. Chlorophyll and nutrients concentrations suggested eutrophication in the lagoon. Mean water temperature changed seasonally from 24.9 degrees C (April, high tide) to 31.4 degrees C (October, low tide). Considering ichthyofauna species, a total of 36 448 individuals of 92 species were collected, 31 of them adding up to 95% of the total of individuals caught. Dominant species were Anchoa spp. (44.6%), Diapterus peruvianus (10.5%), Eucinostomus currani (8.1%), Cetengraulis mysticetus (7.8%), Mugil curema (5.2%) and Opisthonema libertate (4.5%). The lagoon is an important juvenile habitat for 22 of the 31 most abundant species. These included several species of commercial importance such as snappers (Lutjanus argentiventris, L. colorado and L. novemfasciatus), snook (Centropomus nigrescens) and white mullet (Mugil curema). Other four species seem to use the lagoon mainly as adults. This paper is the first contribution on the composition of estuarine ichthyofauna in Jalisco

Monitoring benthic foraminiferal dynamics at Bottsand coastal lagoon (western Baltic Sea)

NASA Astrophysics Data System (ADS)

Schönfeld, Joachim

2018-04-01

Benthic foraminifera from Bottsand coastal lagoon, western Baltic Sea, have been studied since the mid-1960s. They were monitored annually in late autumn since 2003 at the terminal ditch of the lagoon. There were 12 different species recognised, of which three have not been recorded during earlier investigations. Dominant species showed strong interannual fluctuations and a steady increase in population densities over the last decade. Elphidium incertum, a stenohaline species of the Baltic deep water fauna, colonised the Bottsand lagoon in 2016, most likely during a period of salinities >19 units and water temperatures of 18 °C on average in early autumn. The high salinities probably triggered their germination from a propagule bank in the ditch bottom sediment. The new E. incertum population showed densities higher by an order of magnitude than those of the indigenous species. The latter did not decline, revealing that E. incertum used another food source or occupied a different microhabitat. Elphidium incertum survived transient periods of lower salinities in late autumn 2017, though with reduced abundances, and became a regular faunal constituent at the Bottsand lagoon.

Archaeological Evidence for Abrupt Cimate Change: Results from Satellite Imagery Analysis and Subsequent Ground-Truthing in the El-Manzalah Region, Northeast Egyptian Delta

NASA Astrophysics Data System (ADS)

Parcak, S. H.

2003-12-01

The abrupt global climate changes recorded at 8.2, 5.2 and 4.2 ka BP caused a wide range of transformations within ancient societies, including the focus of this study: ancient Egypt . In the case of the climatic changes that occurred at 4.2 ka BP, scholars have debated hotly the events surrounding the "collapse" of the Old Kingdom. Despite such studies into the Old Kingdom's "collapse", there have been insufficient regional settlement pattern studies in Egypt to augment hypotheses concerning the mechanisms behind the cultural transformations that occurred at the end of the Old Kingdom. Utilizing a combination of satellite imagery analysis and subsequent ground-truthing techniques over a broad region in the East Delta, this study aims to reconstruct pharaonic settlement distributions in relation to the changing northeast delta topography, river courses, marshlands, and coastline. Although geo-political and religious factors played varying roles in settlement patterns, this study overlies the economic and environmental components behind the settlement of individual sites and areas. For instance, prior to the formation of the Manzala lagoon, beginning in the 4th century AD, the Mendesian branch of the Nile flowed past Mendes and its satellite, maritime port at Tell Tebilla: As early as the Old Kingdom, Tell Tebilla provided an ideal location for the formation of a town, being well-located to exploit both riverine and maritime transportation routes through trade, and regional floral and faunal resources from hunting, fishing, cultivation and animal husbandry. Key factors such as long-term fluctuations in precipitation, flood levels, and river courses, can affect dramatically the fortunes of individual settlements, areas, and regions, resulting in the decline and abandonment of some sites and the foundation and flourishing of other sites, especially within marginal regions. The Egyptian delta represents an ideal region for studying the impacts of climatic changes

Methane fluxes from tropical coastal lagoons surrounded bymangroves, Yucatán, Mexico

USGS Publications Warehouse

Chuang, Pei-Chuan; Young, Megan B.; Dale, Andrew W.; Miller, Laurence G.; Herrera-Silveira, Jorge A; Paytan, Adina

2017-01-01

Methane concentrations in the water column and emissions to the atmosphere were determined for three tropical coastal lagoons surrounded by mangrove forests on the Yucatán Peninsula, Mexico. Surface water dissolved methane was sampled at different seasons over a period of 2 years in areas representing a wide range of salinities and anthropogenic impacts. The highest surface water methane concentrations (up to 8378 nM) were measured in a polluted canal associated with Terminos Lagoon. In Chelem Lagoon, methane concentrations were typically lower, except in the polluted harbor area (1796 nM). In the relatively pristine Celestún Lagoon, surface water methane concentrations ranged from 41 to 2551 nM. Methane concentrations were negatively correlated with salinity in Celestún, while in Chelem and Terminos high methane concentrations were associated with areas of known pollution inputs, irrespective of salinity. The diffusive methane flux from surface lagoon water to the atmosphere ranged from 0.0023 to 15 mmol CH4 m−2 d−1. Flux chamber measurements revealed that direct methane release as ebullition was up to 3 orders of magnitude greater than measured diffusive flux. Coastal mangrove lagoons may therefore be an important natural source of methane to the atmosphere despite their relatively high salinity. Pollution inputs are likely to substantially enhance this flux. Additional statistically rigorous data collected globally are needed to better consider methane fluxes from mangrove-surrounded coastal areas in response to sea level changes and anthropogenic pollution in order to refine projections of future atmospheric methane budgets.

Chasing boundaries and cascade effects in a coupled barrier-marsh-lagoon system

NASA Astrophysics Data System (ADS)

Lorenzo-Trueba, Jorge; Mariotti, Giulio

2017-08-01

The long-term dynamic evolution of an idealized barrier-marsh-lagoon system experiencing sea-level rise is studied by coupling two existing numerical models. The barrier model accounts for the interaction between shoreface dynamics and overwash flux, which allows the occurrence of barrier drowning. The marsh-lagoon model includes both a backbarrier marsh and an interior marsh, and accounts for the modification of the wave regime associated with changes in lagoon width and depth. Overwash, the key process that connects the barrier shoreface with the marsh-lagoon ecosystems, is formulated to account for the role of the backbarrier marsh. Model results show that a number of factors that are not typically associated with the dynamics of coastal barriers can enhance the rate of overwash-driven landward migration by increasing backbarrier accommodation space. For instance, lagoon deepening could be triggered by marsh edge retreat and consequent export of fine sediment via tidal dispersion, as well as by an expansion of inland marshes and consequent increase in accommodation space to be filled in with sediment. A deeper lagoon results in a larger fraction of sediment overwash being subaqueous, which coupled with a slow shoreface response sending sediment onshore can trigger barrier drowning. We therefore conclude that the supply of fine sediments to the back-barrier and the dynamics of both the interior and backbarrier marsh can be essential for maintaining the barrier system under elevated rates of sea-level rise. Our results highlight the importance of considering barriers and their associated backbarriers as part of an integrated system in which sediment is exchanged.

Assessment of the trophic state of a hypersaline-carbonatic environment: Vermelha Lagoon (Brazil)

PubMed Central

Martins, Maria Virginia Alves; Frontalini, Fabrizio; Ballalai, João M.; Belart, Pierre; Habib, Renan; Fontana, Luiz F.; Clemente, Iara M. M. M.; Lorini, Maria Lucia; Mendonça Filho, João G.; Laut, Vanessa M.; Figueiredo, Marcos de Souza Lima

2017-01-01

Vermelha Lagoon is a hypersaline shallow transitional ecosystem in the state of Rio de Janeiro (Brazil). This lagoon is located in the protected area of Massambaba, between the cities of Araruama and Saquarema (Brazil), and displays two quite uncommon particularities: it exhibits carbonate sedimentation and displays the development of Holocene stromatolites. Due to both particularities, the salt industry and property speculation have been, increasingly, generating anthropic pressures on this ecosystem. This study aims to apply a multiproxy approach to evaluate the trophic state of Vermelha Lagoon based on physicochemical parameters and geochemical data for the quantification and qualification of organic matter (OM), namely total organic carbon (TOC), total sulfur (TS), total phosphorus (TP) and biopolymeric carbon (BPC), including carbohydrates (CHO), lipids (LIP) and proteins (PTN). The CHO/TOC ratio values suggest that OM supplied to the sediment is of autochthonous origin and results, essentially, from microbial activity. The cluster analyses allowed the identification of four regions in Vermelha Lagoon. The Region I included stations located in shallow areas of the eastern sector of Vermelha lagoon affected by the impact of the artificial channel of connection with Araruama Lagoon. The Region II, under the influence of salt pans, is characterized by the highest values of BPC, namely CHO promoted by microbiological activity. The Region III include stations spread through the lagoon with high values of dissolved oxygen and lower values of TP. Stromatolites and microbial mattes growth was observed in some stations of this sector. Region IV, where the highest values of TOC and TS were found, represents depocenters of organic matter, located in general in depressed areas. Results of this work evidences that the Vermelha Lagoon is an eutrophic but alkaline and well oxygenated environment (at both water column and surface sediment) where the autotrophic activity is

Induction of Purple Sulfur Bacterial Growth in Dairy Wastewater Lagoons by Circulation

USDA-ARS?s Scientific Manuscript database

Aims: To determine if circulation of diary wastewater induces the growth of phototrophic purple sulfur bacteria (PSB). Methods and Results: Two dairy wastewater lagoons that were similar in size, geographic location, number and type of cattle loading the lagoons were chosen. The only obvious diffe...

West Nile Virus and wildlife

USGS Publications Warehouse

Marra, P.P.; Griffing, S.; Caffrey, C.; Kilpatrick, A.M.; McLean, R.; Brand, C.; Saito, E.; Dupuis, A.P.; Kramer, Laura; Novak, R.

2004-01-01

West Nile virus (WNV) has spread rapidly across North America, resulting in human deaths and in the deaths of untold numbers of birds, mammals, and reptiles. The virus has reached Central America and the Caribbean and may spread to Hawaii and South America. Although tens of thousands of birds have died, and studies of some bird species show local declines, few regionwide declines can be attributed to WNV. Predicting future impacts of WNV on wildlife, and pinpointing what drives epidemics, will require substantial additional research into host susceptibility, reservoir competency, and linkages between climate, mosquitoes, and disease. Such work will entail a collaborative effort between scientists in governmental research groups, in surveillance and control programs, and in nongovernmental organizations. West Nile virus was not the first, and it will not be the last, exotic disease to be introduced to the New World. Its spread in North America highlights the need to strengthen animal monitoring programs and to integrate them with research on disease ecology.

Assessing hog lagoon waste contamination in the Cape Fear Watershed using Bacteroidetes 16S rRNA gene pyrosequencing.

PubMed

Arfken, Ann M; Song, Bongkeun; Mallin, Michael A

2015-09-01

Hog lagoons can be major sources of waste and nutrient contamination to watersheds adjacent to pig farms. Fecal source tracking methods targeting Bacteroidetes 16S rRNA genes in pig fecal matter may underestimate or fail to detect hog lagoon contamination in riverine environments. In order to detect hog lagoon wastewater contamination in the Cape Fear Watershed, where a large number of hog farms are present, we conducted pyrosequencing analyses of Bacteroidetes 16S rRNA genes in hog lagoon waste and identified new hog lagoon-specific marker sequences. Additional pyrosequencing analyses of Bacteroidetes 16S rRNA genes were conducted with surface water samples collected at 4 sites during 5 months in the Cape Fear Watershed. Using an operational taxonomic unit (OTU) identity cutoff value of 97 %, these newly identified hog lagoon markers were found in 3 of the river samples, while only 1 sample contained the pig fecal marker. In the sample containing the pig fecal marker, there was a relatively high percentage (14.1 %) of the hog lagoon markers and a low pig fecal marker relative abundance of 0.4 % in the Bacteroidetes 16S rRNA gene sequences. This suggests that hog lagoon contamination must be somewhat significant in order for pig fecal markers to be detected, and low levels of hog lagoon contamination cannot be detected targeting only pig-specific fecal markers. Thus, new hog lagoon markers have a better detection capacity for lagoon waste contamination, and in conjunction with a pig fecal marker, provide a more comprehensive and accurate detection of hog lagoon waste contamination in susceptible watersheds.

Assessing hydrological effects of human interventions on coastal systems: numerical applications to the Venice Lagoon

NASA Astrophysics Data System (ADS)

Ferrarin, C.; Ghezzo, M.; Umgiesser, G.; Tagliapietra, D.; Camatti, E.; Zaggia, L.; Sarretta, A.

2013-05-01

The hydrological consequences of historical, contemporary and future human activities on a coastal system were investigated by means of numerical models. The changes in the morphology of the Lagoon of Venice during the last century result from the sedimentological response to the combined effects of human interventions on the environment and global changes. This study focuses on changes from 1927 to 2012 and includes the changes planned for the protection of the city of Venice from storm surges and exceptional tides under future sea level rise scenarios. The application of a hydrodynamic model allowed for the analysis of the morphological effects on the lagoon circulation, the interaction with the sea and the internal mixing processes. The absolute values of the exchange between the lagoon and sea increased from 1927 to 2002 (from 3900 to 4600 m3 s-1), while the daily fraction of lagoon water volume exchanged decreased. At the same time, the flattening of the lagoon and loss of morphological heterogeneity enhanced the internal mixing processes driven by the tide and wind, reducing thus the overall water renewal time from 11.9 days in 1927 to 10.8 days in 2002. Morphological changes during the last decade reduced the water exchange through the inlets and induced an increase of the basin-wide water renewal time of 0.5 day. In the future, Venice Lagoon will evolve to a more restricted environment due to sea level rise, which increases the lagoon volume, and periodical closure of the lagoon from the sea during flooding events, which reduces the communication with the open sea. Therefore, the flushing capacity of the lagoon will decrease considerably, especially in its central part. Furthermore, some considerations on the impact of the hydromorphological changes on the ecological dynamics are proposed.

Hubble reveals heart of Lagoon Nebula

NASA Image and Video Library

2010-09-22

Image release date September 22, 2010 To view a video of this image go here: www.flickr.com/photos/gsfc/5014452203 Caption: A spectacular new NASA/ESA Hubble Space Telescope image reveals the heart of the Lagoon Nebula. Seen as a massive cloud of glowing dust and gas, bombarded by the energetic radiation of new stars, this placid name hides a dramatic reality. The Advanced Camera for Surveys (ACS) on the NASA/ESA Hubble Space Telescope has captured a dramatic view of gas and dust sculpted by intense radiation from hot young stars deep in the heart of the Lagoon Nebula (Messier 8). This spectacular object is named after the wide, lagoon-shaped dust lane that crosses the glowing gas of the nebula. This structure is prominent in wide-field images, but cannot be seen in this close-up. However the strange billowing shapes and sandy texture visible in this image make the Lagoon Nebula’s watery name eerily appropriate from this viewpoint too. Located four to five thousand light-years away, in the constellation of Sagittarius (the Archer), Messier 8 is a huge region of star birth that stretches across one hundred light-years. Clouds of hydrogen gas are slowly collapsing to form new stars, whose bright ultraviolet rays then light up the surrounding gas in a distinctive shade of red. The wispy tendrils and beach-like features of the nebula are not caused by the ebb and flow of tides, but rather by ultraviolet radiation’s ability to erode and disperse the gas and dust into the distinctive shapes that we see. In recent years astronomers probing the secrets of the Lagoon Nebula have found the first unambiguous proof that star formation by accretion of matter from the gas cloud is ongoing in this region. Young stars that are still surrounded by an accretion disc occasionally shoot out long tendrils of matter from their poles. Several examples of these jets, known as Herbig-Haro objects, have been found in this nebula in the last five years, providing strong support for

Modelling alpha-diversities of coastal lagoon fish assemblages from the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Riera, R.; Tuset, V. M.; Betancur-R, R.; Lombarte, A.; Marcos, C.; Pérez-Ruzafa, A.

2018-07-01

Coastal lagoons are marine ecosystems spread worldwide with high ecological value; however, they are increasingly becoming deteriorated as a result of anthropogenic activity. Their conservation requires a better understanding of the biodiversity factors that may help identifying priority areas. The present study is focused on 37 Mediterranean coastal lagoons and we use predictive modelling approaches based on Generalized Linear Model (GLM) analysis to investigate variables (geomorphological, environmental, trophic or biogeographic) that may predict variations in alpha-diversity. It included taxonomic diversity, average taxonomic distinctness, and phylogenetic and functional diversity. Two GLM models by index were built depending on available variables for lagoons: in the model 1 all lagoons were used, and in the model 2 only 23. All alpha-diversity indices showed variability between lagoons associated to exogenous factors considered. The biogeographic region strongly conditioned most of models, being the first variable introduced in the models. The salinity and chlorophyll a concentration played a secondary role for the models 1 and 2, respectively. In general, the highest values of alpha-diversities were found in northwestern Mediterranean (Balearic Sea, Alborán Sea and Gulf of Lion), hence they might be considered "hotspots" at the Mediterranean scale and should have a special status for their protection.

Pan-European management of coastal lagoons: A science-policy-stakeholder interface perspective

NASA Astrophysics Data System (ADS)

Lillebø, Ana I.; Stålnacke, Per; Gooch, Geoffrey D.; Krysanova, Valentina; Bielecka, Małgorzata

2017-11-01

The main objective of the work carried out in the scope of a three years collaborative research project was to develop science-based strategies and a decision support framework for the integrated management of coastal lagoons and their catchments and, in this context, to enhance connectivity between research and policymaking. In this paper our main objective is to share the lessons learned from the innovative methodology used throughout the project. To achieve the proposed objectives, the multidisciplinary scientific knowledge in the project team was combined and integrated with the knowledge and views of local stakeholders of four selected European coastal lagoons, using a three step participatory approach. With this innovative approach, which included the usage of eco-hydrological and water quality-modelling tools, the team developed and analyzed integrated scenarios of possible economic development and environmental impacts in four European lagoons and their catchments. These scenarios were presented and discussed with stakeholders, giving rise to management recommendations for each case study lagoon. Results show that some management options might be transferrable to other European lagoons having similar climatic, geophysical and socio-economic settings. In management terms, the project output provides a set of policy guidelines derived from the different analyses conducted and proposes initiatives concerning management implementation in a local-regional-national-European setting.

Lagoon-sea exchanges, nutrient dynamics and water quality management of the Ria Formosa (Portugal)

NASA Astrophysics Data System (ADS)

Newton, Alice; Mudge, Stephen M.

2005-02-01

Historical data from the Ria Formosa lagoon are classified according to the EEA 2001 guidelines to provide a frame of reference to evaluate the effect of management during the implementation of the environmental legislative Directives. Water samples from the Ria Formosa lagoon were significantly enriched in nitrogen (NH 4+ NO 2- and NO 3-) with respect to the adjacent coastal waters indicating that inputs from sewage, agricultural runoff and benthic fluxes were not fully assimilated within the lagoon. Tidal flushing was insufficient in the inner areas of the lagoon to remove or effectively dilute these inputs. Enrichment was most severe close to the urban centres of Faro and Olhão, as well as in the Gilão Estuary and the shallow extremities. Dissolved oxygen undersaturation (mean 75% during daylight hours) was associated with the area close to the sewage outlets of Faro. In the shallow west end of the lagoon during summer, dissolved oxygen supersaturation reached 140% during the day but fell to 50% at night. Classification using the EEA (2001) guidelines suggests the system is "poor" or "bad" with respect to phosphate concentrations for the majority of the year and "poor" in nitrogen contamination during the autumn rainy period. Due to the high overall nitrogen load in the lagoon, there is a net export to the coastal waters, especially during November and December, and phosphate only becomes limiting briefly during the spring bloom (April). Therefore, substantial phytoplankton populations may be supported year-round in the lagoon. The consequences of water quality deterioration in the Ria Formosa would negatively affect the lagoon as a regional resource, important for its ecological, economic and recreational value. The industries most affected would be tourism, fisheries and aquaculture. Management options include Urban Waste Water Treatment, dredging, artificial inlets, limits on urban development and changes in agricultural practices.

CISOCUR - Residence time modelling in the Curonian Lagoon and validation through stable isotope measurements

NASA Astrophysics Data System (ADS)

Umgiesser, Georg; Razinkovas-Baziukas, Arturas; Zemlys, Petras; Ertürk, Ali; Mėžinė, Jovita

2015-04-01

The spatial pattern of the hydrodynamic circulation of the Curonian lagoon, the largest European coastal lagoon, is still little understood. In absence of automatic current registration data all the existing models relied mostly on such data as water levels leaving high level of uncertainty. Here we present CISOCUR, a new project financed by European Social Fund under the Global Grant measure. The project applies a new methodology that uses the carbon stable isotope (SI) ratio of C12 and C13 that characterize different water sources entering the lagoon and may be altered by internal kinetic processes. Through the tracing of these isotope ratios different water masses can be identified. This gives the possibility to validate several hypotheses of water circulation and validate hydrodynamic models. In particular it will be possible to 1) trace water masses entering the lagoon through the Nemunas and the Klaipeda strait; 2) test the hypothesis of sediment transport mechanisms inside the lagoon; 3) evaluate the importance of physical forcing on the lagoon circulation. The use of a hydrodynamic finite element model, coupled with the SI method, will allow for a realistic description of the transport processes inside the Curonian lagoon. So the main research goal is to apply the stable isotope tracers and a finite element model to determine the circulation patterns in the Curonian lagoon. Here we show how the SI analysis was used to validate the hydrodynamic model on the basis of residence time. The average residence time of the Nemunas waters is estimated through SI data and is then compared with the model data computed through standard algorithms. Seasonal changes of carbon content are taken care of through a preliminary application of a carbon kinetic model. The results are compared to literature data.

Delta Vision, Delta Voices: The Mississippi Delta Beyond 2000

DOT National Transportation Integrated Search

2000-05-10

This Report has taken its guidance from a single overriding goal: To recognize the enormous natural, capital, and cultural resources of the Delta, and to enable all of the Delta's citizens to participate as full and successful partners in America's s...

Neuropsychological Impact of West Nile Virus Infection: An Extensive Neuropsychiatric Assessment of 49 Cases in Canada.

PubMed

Samaan, Zainab; McDermid Vaz, Stephanie; Bawor, Monica; Potter, Tammy Hlywka; Eskandarian, Sasha; Loeb, Mark

2016-01-01

West Nile virus emerged as an important human pathogen in North America and continues to pose a risk to public health. It can cause a highly variable range of clinical manifestations ranging from asymptomatic to severe illness. Neuroinvasive disease due to West Nile virus can lead to long-term neurological deficits and psychological impairment. However, these deficits have not been well described. The objective of this study was to characterize the neuropsychological manifestations of West Nile virus infection with a focus on neuroinvasive status and time since infection. Patients from Ontario Canada with a diagnosis of neuroinvasive disease (meningitis, encephalitis, or acute flaccid paralysis) and non-neuroinvasive disease who had participated in a cohort study were enrolled. Clinical and laboratory were collected, as well as demographics and medical history. Cognitive functioning was assessed using a comprehensive battery of neuropsychological tests. Data from 49 individuals (32 with West Nile fever and 17 with West Nile neuroinvasive disease) were included in the present cross-sectional analysis. Patterns of neuropsychological impairment were comparable across participants with both neuroinvasive and non-neuroinvasive West Nile virus infection on all cognitive measures. Neuropsychiatric impairment was also observed more frequently at two to four years post-infection compared to earlier stages of illness. Our data provide objective evidence for cognitive difficulties among patients who were infected with West Nile virus; these deficits appear to manifest regardless of severity of West Nile virus infection (West Nile fever vs. West Nile neuroinvasive disease), and are more prevalent with increasing illness duration (2-4 years vs. 1 month). Data from this study will help inform patients and healthcare providers about the expected course of recovery, as well as the need to implement effective treatment strategies that include neuropsychological interventions.

Spatial Variation in Development of Epibenthic Assemblages in a Coastal Lagoon

NASA Astrophysics Data System (ADS)

Benedetti-Cecchi, L.; Rindi, F.; Bertocci, I.; Bulleri, F.; Cinelli, F.

2001-05-01

Spatial and temporal patterns in colonization of epibenthic assemblages were measured in a coastal lagoon on the west coast of Italy using recruitment panels. It was proposed that if the ecological processes influencing development of assemblages were homogeneous within the lagoon, then there should be no differences in mean cover of colonists nor in spatial patterns of variance in abundance in different areas of the lagoon. In contrast, heterogeneity in ecological processes affecting development would be revealed by spatial variability in colonization. To test these hypotheses, two sticks each with five replicate panels were placed 3-5 m apart in each of two sites 30-100 m apart in each of three locations 500-100 m apart; the experiment was repeated three times between April and December 1999, using new sites at each location each time. The results revealed considerable spatial variation in the structure of developing assemblages across locations. There were significant Location or Time×Location effects in the mean abundance of common taxa, such as Enteromorpha intestinalis , Ulva rigida, Cladophora spp., bryozoans and serpulids. Patterns in spatial variation differed among locations for these organisms. Collectively, the results supported a model of spatial heterogeneity in intensity of processes influencing patterns of recruitment and development of epibenthic assemblages in the Lagoon of Orbetello. The implications of these results for management of environmental problems in complex, variable habitats such as coastal lagoons, are discussed.

Phosphorus recovery from anaerobic swine lagoon sludge using the quick wash process

USDA-ARS?s Scientific Manuscript database

Long term accumulation of sludge in anaerobic swine lagoons reduces its storage volume and ability to treat waste. Usually, excess accumulation of lagoon sludge is removed using pumping dredges. The dredged sludge is then land applied at agronomic rates according to its nutrient content. The accumul...

Phosphorus recovery from anaerobic swine lagoon sludge using the quick wash process

USDA-ARS?s Scientific Manuscript database

Long term and significant accumulation of sludge in anaerobic swine lagoons reduces its storage volume and ability to treat waste. Usually, excess accumulation of lagoon sludge is removed by dredging. The dredged sludge is then land applied at agronomic rates according to its nutrient content. Becau...

[Birds, mosquitoes and West Nile virus: little risk of West Nile fever in the Netherlands].

PubMed

Duijster, Janneke W; Stroo, C J Arjan; Braks, Marieta A H

2016-01-01

Due to increased incidence of West Nile fever (WNF) in Europe and the rapid spread of West Nile virus (WNV) in the US, it is commonly thought that it will only be a matter of time before WNV reaches the Netherlands. However, assessing whether WNV is really a threat to the Dutch population is challenging, due to the numerous factors affecting transmission of the virus. Some of these factors are known to limit the risk of WNF in the Netherlands. This risk is determined by the interaction between the pathogen (WNV), the vectors (Culex mosquitoes), the reservoirs (birds) and the exposure of humans to infected mosquitoes. In this paper, we discuss the factors influencing introduction, establishment and spread of WNV in the Netherlands. The probability that each of these three phases will occur in the Netherlands is currently relatively small, as is the risk of WNF infection in humans in the Netherlands.

Brominated Flame Retardants in Sediments of Four Coastal Lagoons of Yucatan, Mexico.

PubMed

Valenzuela-Sánchez, I S; Gold-Bouchot, G; Hernández-Núñez, E; Barrientos-Medina, R C; Garza-Gisholt, E; Zapata-Pérez, O

2018-05-02

We examined the sediments of four coastal lagoons (Ria Lagartos, Bocas de Dzilam, Laguna de Chelem and Ria Celestun) from the state of Yucatan, Mexico, for three widely used commercial polybrominated diphenyl ethers formulations (penta-, octa- and deca-BDE). The most commonly found congeners in all four lagoons were BDEs 47, 99 and 100 (all in the penta-BDE formulation) and BDE209 (deca-BDE formulation). The greatest variety and highest concentrations of brominated flame retardants were found in Ria Lagartos, which also showed the highest BDE 100 concentration (24.129 ng/g). Hexabromocyclododecane was found in all lagoons, but at lower concentrations than those of the various polybrominated diphenyl ethers. Dispersal routes of these compounds are discussed, such as a ring of sinkholes (cenotes) adjacent to the lagoons. Moreover, electronic waste is a serious problem because municipal landfills have been the primary disposal method for these wastes and therefore represent a reservoir of brominated fire retardants.

Accuracy of vertical radial plume mapping technique in measuring lagoon gas emissions.

PubMed

Viguria, Maialen; Ro, Kyoung S; Stone, Kenneth C; Johnson, Melvin H

2015-04-01

Recently, the U.S. Environmental Protection Agency (EPA) posted a ground-based optical remote sensing method on its Web site called Other Test Method (OTM) 10 for measuring fugitive gas emission flux from area sources such as closed landfills. The OTM 10 utilizes the vertical radial plume mapping (VRPM) technique to calculate fugitive gas emission mass rates based on measured wind speed profiles and path-integrated gas concentrations (PICs). This study evaluates the accuracy of the VRPM technique in measuring gas emission from animal waste treatment lagoons. A field trial was designed to evaluate the accuracy of the VRPM technique. Control releases of methane (CH4) were made from a 45 m×45 m floating perforated pipe network located on an irrigation pond that resembled typical treatment lagoon environments. The accuracy of the VRPM technique was expressed by the ratio of the calculated emission rates (QVRPM) to actual emission rates (Q). Under an ideal condition of having mean wind directions mostly normal to a downwind vertical plane, the average VRPM accuracy was 0.77±0.32. However, when mean wind direction was mostly not normal to the downwind vertical plane, the emission plume was not adequately captured resulting in lower accuracies. The accuracies of these nonideal wind conditions could be significantly improved if we relaxed the VRPM wind direction criteria and combined the emission rates determined from two adjacent downwind vertical planes surrounding the lagoon. With this modification, the VRPM accuracy improved to 0.97±0.44, whereas the number of valid data sets also increased from 113 to 186. The need for developing accurate and feasible measuring techniques for fugitive gas emission from animal waste lagoons is vital for livestock gas inventories and implementation of mitigation strategies. This field lagoon gas emission study demonstrated that the EPA's vertical radial plume mapping (VRPM) technique can be used to accurately measure lagoon gas

Nutrient budgets and trophic state in a hypersaline coastal lagoon: Lagoa de Araruama, Brazil

NASA Astrophysics Data System (ADS)

Souza, Marcelo F. L.; Kjerfve, Björn; Knoppers, Bastiaan; Landim de Souza, Weber F.; Damasceno, Raimundo N.

2003-08-01

Lagoa de Araruama in the state of Rio de Janeiro, Brazil, is a hypersaline lagoon with salinity varying spatially from 45 to 56. We collected water samples during monthly cruises throughout the lagoon, and along the streams feeding the system, from April 1991 to March 1992. Nutrients and other water quality parameters exhibited great spatial and temporal variations. Mass balance calculations indicate large amounts of anthropogenic nutrient inputs. The data indicate that the lagoon currently is oligotrophic but is in a state of transition to become a mesotrophic system. Molar dissolved inorganic nitrogen:dissolved inorganic phosphorus (DIN/DIP) varied between 2.2:1 and 659:1 with a volume-weighted average of 22:1. The high DIN/DIP ratio contrasts with that found in nearby lagoons, suggesting that phytoplankton primary production is limited by phosphorus in Lagoa de Araruama. The major loss of DIP is apparently driven by biological assimilation and diagenic reactions in the sediments. Calculations indicate that the lagoon is slightly net autotrophic at +0.9 mol C m -2 yr -1. This suggests that the biomass of the primary producers is restricted by phosphorus availability. Phosphorus retention in the sediment and the hypersaline state of the lagoon prevent changes in autotrophic communities and the formation of eutrophic conditions.

Spatial distribution, enrichment, and source of environmentally important elements in Batticaloa lagoon, Sri Lanka.

PubMed

Adikaram, Madurya; Pitawala, Amarasooriya; Ishiga, Hiroaki; Jayawardana, Daham

2017-01-01

The present paper is the first documentation of distribution and contamination status of environmentally important elements of superficial sediments in the Batticaloa lagoon that is connected to the largest bay of the world. Surface sediment samples were collected from 34 sites covering all over the lagoon. Concentrations of elements such as As, Cr, Cu, Fe, Nb, Ni, Pb, Sc, Sr, Th, V, Y, Zn, and Zr were measured by X-ray florescence analysis. Geochemically, the lagoon has three different zones that were influenced mainly by fresh water sources, marine fronts, and intermediate mixing zones. The marine sediment quality standards indicate that Zr and Th values are exceeded throughout the lagoon. According to the freshwater sediment quality standards, Cr levels of all sampling sites exceed the threshold effect level (TEL) and 17 % of them are even above the probable effect level (PEL). Most sampling sites of the channel discharging areas show minor enrichment of Cu, Ni, and Zn with respect to the TEL. Contamination indices show that the lagoon mouth area is enriched with As. Statistical analysis implies that discharges from agricultural channel and marine fluxes of the lagoon effects on the spatial distribution of measured elements. Further research is required to understand the rate of contamination in the studied marine system.

Hydrology and empire: the Nile, water imperialism and the partition of Africa.

PubMed

Tvedt, Terje

2011-01-01

Why did the British march up the Nile in the 1890s? The answers to this crucial question of imperial historiography have direct relevance for narratives and theories about imperialism, in general, and the partition of Africa in the nineteenth century, in particular. They will also influence our understanding of some of the main issues in the modern history of the whole region, including state developments and resource utilisation. This article presents an alternative to dominant interpretations of the partition of Africa and the role of British Nile policies in this context. It differs from mainstream diplomatic history, which dominates this research field, in its emphasis on how geographical factors and the hydrological characteristics of the Nile influenced and framed British thinking and actions in the region. Realising the importance of such factors and the specific character of the regional water system does not imply less attention to traditional diplomatic correspondence or to the role of individual imperial entrepreneurs. The strength of this analytical approach theoretically is that it makes it possible to locate the intentions and acts of historical subjects within specific geographical contexts. Empirically, it opens up a whole new set of source material, embedding the reconstruction of the British Nile discourse in a world of Nile plans, water works and hydrological discourses.

Groundwater dependence of coastal lagoons: The case of La Pletera salt marshes (NE Catalonia)

NASA Astrophysics Data System (ADS)

Menció, A.; Casamitjana, X.; Mas-Pla, J.; Coll, N.; Compte, J.; Martinoy, M.; Pascual, J.; Quintana, X. D.

2017-09-01

Coastal wetlands are among the most productive ecosystems of the world, playing an important role in coastal defense and wildlife conservation. These ecosystems, however, are usually affected by human activities, which may cause a loss and degradation of their ecological status, a decline of their biodiversity, an alteration of their ecological functioning, and a limitation of their ecosystem services. La Pletera salt marshes (NE Spain) are located in a region mainly dominated by agriculture and tourism activities. Part of these wetlands and lagoons has been affected by an incomplete construction of an urban development and in this moment is the focus of a Life+ project, whose aim is to restore this protected area. Several studies have analyzed the role of hydrological regime in nutrients, phytoplankton and zooplankton in this area, however, the role of groundwater was never considered as a relevant factor in the lagoon dynamics, and its influence is still unknown. In this study, the hydrogeological dynamics in La Pletera salt marshes has been analyzed, as a basis to set sustainable management guidelines for this area. In order to determine their dependence on groundwater resources, monthly hydrochemical (with major ions and nutrients) and isotopic (δ18OH2O and δD) campaigns have been conducted, from November 2014 to October 2015. In particular, groundwater from six wells, surface water from two nearby streams and three permanent lagoons, and sea water was considered in these surveys. Taking into account the meteorological data and the water levels in the lagoons, the General Lake Model has been conducted to determine, not only evaporation and rainfall occurring in the lagoons, but also the total inflows and outflows. In addition, the Gonfiantini isotopic model, together with equilibrium chemical-speciation/mass transfer models, has been used to analyze the evaporation and the physicochemical processes affecting the lagoons. Results show that during the dry

A review of vaccine approaches for West Nile virus.

PubMed

Iyer, Arun V; Kousoulas, Konstantin G

2013-09-10

The West Nile virus (WNC) first appeared in North America in 1999. The North American lineages of WNV were characterized by the presence of neuroinvasive and neurovirulent strains causing disease and death in humans, birds and horses. The 2012 WNV season in the United States saw a massive spike in the number of neuroinvasive cases and deaths similar to what was seen in the 2002-2003 season, according to the West Nile virus disease cases and deaths reported to the CDC by year and clinical presentation, 1999-2012, by ArboNET (Arboviral Diseases Branch, Centers for Disease Control and Prevention). In addition, the establishment and recent spread of lineage II WNV virus strains into Western Europe and the presence of neurovirulent and neuroinvasive strains among them is a cause of major concern. This review discusses the advances in the development of vaccines and biologicals to combat human and veterinary West Nile disease.

A Review of Vaccine Approaches for West Nile Virus

PubMed Central

Iyer, Arun V.; Kousoulas, Konstantin G.

2013-01-01

The West Nile virus (WNC) first appeared in North America in 1999. The North American lineages of WNV were characterized by the presence of neuroinvasive and neurovirulent strains causing disease and death in humans, birds and horses. The 2012 WNV season in the United States saw a massive spike in the number of neuroinvasive cases and deaths similar to what was seen in the 2002–2003 season, according to the West Nile virus disease cases and deaths reported to the CDC by year and clinical presentation, 1999–2012, by ArboNET (Arboviral Diseases Branch, Centers for Disease Control and Prevention). In addition, the establishment and recent spread of lineage II WNV virus strains into Western Europe and the presence of neurovirulent and neuroinvasive strains among them is a cause of major concern. This review discusses the advances in the development of vaccines and biologicals to combat human and veterinary West Nile disease. PMID:24025396

Conflicts of Shared Resources: A Case Study of River Nile

DTIC Science & Technology

2012-03-22

as Lake Kivu. Rwanda joined the earlier Nile basin project, Hydromet , in 1967, with the support on the UNDP. 18 Although the country does not...operation Hydromet . In 1967, with the assistance of the United Nations Development Program (UNDP) and the World Meteorological Organization (WMO), Egypt...Kenya, Sudan, Tanzania and Uganda launched the Hydromet Survey project to regulate the water level of the Nile.”30 Rwanda joined later while Ethiopia

Risk Assessment for the Explosive Washout Lagoons (Site 4), Umatilla Depot Activity Hermiston, Oregon

DTIC Science & Technology

1992-03-01

Activity .............................. 2 2-2 Explosive Washout Lagoons (Site 4) and Washout Plant Area ............................... 2-3 3-1 Site 4...ponds for liquid wastes from bomb-washing operations in the washout plant . The measured dimensions of the flat bottoms of the two lagoons are 30 by 80...explosives washout plant system was drained, flushed, and cleaned approximately once each week from the mid-1950s until 1965. The lagoons received all of the

West Nile Virus Infection among Humans, Texas, USA, 2002–2011

PubMed Central

Nolan, Melissa S.; Schuermann, Jim

2013-01-01

We conducted an epidemiologic analysis to document West Nile virus infections among humans in Texas, USA, during 2002–2011. West Nile virus has become endemic to Texas; the number of reported cases increased every 3 years. Risk for infection was greatest in rural northwestern Texas, where Culex tarsalis mosquitoes are the predominant mosquito species. PMID:23260575

Lagoon microbialites on Isla Angel de la Guarda and associated peninsular shores, Gulf of California (Mexico)

NASA Astrophysics Data System (ADS)

Johnson, Markes E.; Ledesma-Vázquez, Jorge; Backus, David H.; González, Maria R.

2012-07-01

Examples of two closed lagoons with extensive growth of Recent microbialites showing variable surface morphology and internal structure are found on Isla Angel de la Guarda in the Gulf of California. Comparable lagoonal microbialites also occur ashore from Ensenada El Quemado on the adjacent peninsular mainland of Baja California. The perimeters of all three lagoons feature crusted structures indicative of thrombolites with a knobby surface morphology 2 cm to 3 cm in relief and internal clotting without any sign of laminations. Outward from this zone, thrombolitic construction thins to merge with a white calcified crust below which a soft substratum of dark organic material 4 cm to 6 cm in thickness is concealed. The substratum is laminated and heavily mucilaginous, as observed along the edges of extensive shrinkage cracks in the overlying crust. The thrombolitic crust is anchored to the shore, while the thinner crust and associated stromatolitic mats float on the surface of the lagoons. Laboratory cultures of the dark organic material yielded the solitary cyanobacterium Chroococcidiopsis as the predominant taxon interspersed with filamentous forms. In decreasing order of abundance, other morphotypes present include Phormidium, Oscillatoria, Geitlerinema, Chroococus, and probably Spirulina. The larger of the two island lagoons follows an east-west azimuth and covers 0.225 km2, while the smaller lagoon has a roughly north-south axis and covers only 0.023 km2. The salinity of water in the smaller lagoon was measured as148 ppt. Pliocene strata along the edge of the smaller modern lagoon include siltstone bearing calcified platelets suggestive of a microbial origin. Dry lagoons abandoned during the later Quaternary occur inland at higher elevations on the island, but retain no fossils except for sporadic white crusts cemented on cobbles around distinct margins. Raised Quaternary lagoons parallel to the big lagoon on Isla Angel de la Guarda are partly obscured by flood

Socio-economic appraisal of fishing community in Pulicat lagoon, south east coast of India: case study.

PubMed

Devi, V Vandhana; Krishnaveni, M

2012-10-01

Assessment of socio-economic issues of fishing community is an important aspect in framing a strategy for the preservation of eco-systems which leads to sustainable lagoon management. The present investigation analyses the current potential socio-economic status of the fishing community of Pulicat lagoon, the second largest lagoon in India. The socio-economic indicators considered in the study include demography, economic aspects, social aspects and occupation details. The relevant details were collected from 300 fisher folk family by conducting field survey through a well prepared questionnaire in the villages around Pulicat lagoon. The data analysis was done using Statistical Program for Social Sciences (SPSS) to assess the adequacy and precision of the collected data. The important and encouraging socio-economic indicators identified from the field survey for effective lagoon management includes significant presence of younger generation in the region; affinity and self-belongingness of fisher folk towards the lake; better economic status and moderate education level; appreciable fishing income and affinity towards fishing profession. It is emphasized to motivate the fisher folk to improve their work attitude for betterment in economic status. The pertinent lagoon issues, comprising seasonal variation, local fishing issues, pollution from industries, water intake to thermal power plant which directly or indirectly affects the socio-economic status of fishing community, also need much emphasis while proposing sustainable lagoon management system. The information and observation from this study will be very helpful in formulating management policies on the conservation of the Pulicat lagoon ecosystem.

The atypical hydrodynamics of the Mayotte Lagoon (Indian Ocean): Effects on water age and potential impact on plankton productivity

NASA Astrophysics Data System (ADS)

Chevalier, C.; Devenon, J. L.; Pagano, M.; Rougier, G.; Blanchot, J.; Arfi, R.

2017-09-01

In mesotidal lagoons of the Indian Ocean, the coral reef barrier may be temporarily submerged at high tide and partially exposed at low tide, and this may cause unusual lagoon dynamics. A field measurement campaign was conducted in the north-east Mayotte Lagoon in order to understand these processes. An experimental approach was used, combining measurements taken by 1) a side-mounted Acoustic Doppler Current Profiler (ADCP) on a moving boat along transects through the reef passages (17 transects) and 2) by more conventional high-resolution moored ADCP measurements. A specific tidal analysis methodology was used to determine the spatial variability of the velocity. The tidal hydrodynamics within the lagoon were determined using a numerical model and then analyzed. The tide acted as a quasi-progressive forced wave in the lagoon: at low tide, water entered through the south passage, over the reef and left the lagoon through the north passage. This flow was reversed at high tide. The tide-driven quasi-progressive wave created a specific lagoon dynamics. Contrary to most other channel lagoons, the flow over the reef was mainly outward. This increases the inflow through the passages, which renews the water in the lagoon as shown by the indicators of age and origin of the water inside the lagoon. This study also showed the importance of these indicators for better understanding the variations and levels of plankton biomass (with chlorophyll concentration as proxy) which is quite high in this lagoon.

Groundwater and porewater as major sources of alkalinity to a fringing coral reef lagoon (Muri Lagoon, Cook Islands)

NASA Astrophysics Data System (ADS)

Cyronak, T.; Santos, I. R.; Erler, D. V.; Eyre, B. D.

2013-04-01

To better predict how ocean acidification will affect coral reefs, it is important to understand how biogeochemical cycles on reefs alter carbonate chemistry over various temporal and spatial scales. This study quantifies the contribution of shallow porewater exchange (as quantified from advective chamber incubations) and fresh groundwater discharge (as traced by 222Rn) to total alkalinity (TA) dynamics on a fringing coral reef lagoon along the southern Pacific island of Rarotonga over a tidal and diel cycle. Benthic alkalinity fluxes were affected by the advective circulation of water through permeable sediments, with net daily flux rates of carbonate alkalinity ranging from -1.55 to 7.76 mmol m-2 d-1, depending on the advection rate. Submarine groundwater discharge (SGD) was a source of TA to the lagoon, with the highest flux rates measured at low tide, and an average daily TA flux of 1080 mmol m-2 d-1 at the sampling site. Both sources of TA were important on a reef-wide basis, although SGD acted solely as a delivery mechanism of TA to the lagoon, while porewater advection was either a sink or source of TA dependent on the time of day. This study describes overlooked sources of TA to coral reef ecosystems that can potentially alter water column carbonate chemistry. We suggest that porewater and groundwater fluxes of TA should be taken into account in ocean acidification models in order to properly address changing carbonate chemistry within coral reef ecosystems.

Evidence of North Africa’s Green Revolution Preserved in Sedimentary Organic Matter Deposited in Three Coastal Lagoons.

EPA Science Inventory

Because of longer residence times and limited mixing in coastal lagoons, the impacts of anthropogenic nutrient loading to lagoon food webs are often more pronounced than in other coastal ecosystems. For these reasons, many lagoons also provide an excellent environment for the dep...

Nile Delta Fisheries, Egypt

NASA Image and Video Library

2015-12-09

On the left is a radar image of asteroid 1998 WT24 taken in December 2001 by scientists using NASA's the 230-foot (70-meter) DSS-14 antenna at Goldstone, California. On the right is a radar image of the same asteroid acquired on Dec. 11, 2015, during the asteroid's most recent Earth flyby. The radar images from 2001 (on the left), have a resolution of about 60 feet (19 meters) per pixel. The radar image from 2015 (on the right) achieved a spatial resolution as fine as 25 feet (7.5 meters) per pixel. The 2015 radar image was obtained using the same DSS-14 antenna at Goldstone to transmit high-power microwaves toward the asteroid. However, this time, the radar echoes bounced off the asteroid were received by the National Radio Astronomy Observatory's 100-meter (330-foot) Green Bank Telescope in West Virginia. The next visit of asteroid 1998 WT24 to Earth's neighborhood will be on Nov. 11, 2018, when it will make a distant pass at about 12.5-million miles (52 lunar distances). http://photojournal.jpl.nasa.gov/catalog/PIA20216

Decline of phosphorus, copper, and zinc in anaerobic lagoon columns receiving pretreated influent

USDA-ARS?s Scientific Manuscript database

Confined swine production generates large volumes of wastewater typically stored and treated in anaerobic lagoons. These lagoons usually require a sludge management plan for their maintenance consisting of regular sludge removal by mechanical agitation and pumping followed by land application at agr...

The role of benthic macrophytes and their associated macroinvertebrate community in coastal lagoon resistance to eutrophication.

PubMed

Lloret, Javier; Marín, Arnaldo

2009-12-01

Eutrophication is widely recognised as one of the major menaces to coastal environments, particularly enclosed bays and lagoons. Although there is a general understanding of the consequences of eutrophication in these systems, there is a lack of sufficient knowledge concerning biotic feedbacks that influence eutrophication patterns and the resistance capacity of coastal environments. In this paper, the isotope ratios of main producers and consumers of a Mediterranean lagoon were examined in order to elucidate the fate of anthropogenic inputs from the main watercourse flowing into the lagoon. The results of the study of stable isotope data in the Mar Menor lagoon reflected that the whole benthic community plays an important role as a natural 'filter' that removes excess nutrients from the water column and stores them in the sediments, thereby enhancing lagoon resistance to eutrophication.

Living in a coastal lagoon environment: photosynthetic and biochemical mechanisms of key marine macroalgae.

PubMed

García-Sánchez, Marta; Korbee, Nathalie; Pérez-Ruzafa, Isabel María; Marcos, Concepción; Figueroa, Félix L; Pérez-Ruzafa, Ángel

2014-10-01

The physiological status of Cystoseira compressa, Padina pavonica and Palisada tenerrima was studied by in vivo chlorophyll fluorescence, pigment content, stoichiometry (C:N), accumulation of UV photoprotectors and antioxidant activity; comparing their photosynthetic response in a coastal lagoon (Mar Menor) and in Mediterranean coastal waters. In general, the specimens reached their highest ETRmax in spring in the Lagoon, but in summer in the Mediterranean, coinciding with their maximum biomass peak. The species exhibited a dynamic photoinhibition. Except C. compressa, they showed a lower decrease in Fv/Fm and higher recovery rates in the Mediterranean populations when exposed to high irradiance. The higher salinity and temperature of the lagoon could impair the photoprotection mechanisms. The acclimation to lagoon environments is species-specific and involves complex regulatory mechanisms. The results underline the importance of N in repair, avoidance, quenching and scavenging mechanisms. In general, Lagoon specimens showed higher pigment concentration. Although xanthophylls play important photo-protective and antioxidant roles, the observed trend is more likely to be explained by the higher temperatures reached in the lagoon compared to Mediterranean. Therefore the studied photosynthetic and biochemical mechanisms can be effective not only for high irradiance, but also for higher temperatures in a climate change scenario, but are highly dependent on nutrient availability. Copyright © 2014 Elsevier Ltd. All rights reserved.

A Bayesian Network Model for Assessing Estrogen Fate and Transport in a Swine Waste Lagoon

PubMed Central

Lee, Boknam; Kullman, Seth W.; Yost, Erin; Meyer, Michael T.; Worley-Davis, Lynn; Reckhow, Kenneth H.

2017-01-01

Commercial swine waste lagoons are regarded as a major reservoir of natural estrogens, which have the potential to produce adverse physiological effects on exposed aquatic organisms and wildlife. However, there remains limited understanding of the complex mechanisms of physical, chemical, and biological processes that govern the fate and transport of natural estrogens within an anaerobic swine lagoon. To improve lagoon management and ultimately help control the offsite transport of these compounds from swine operations, a Bayesian network model was developed to predict estrogen fate and budget and compared against data collected from a commercial swine field site. In general, the model was able to predict the estrogen fate and budget in both the slurry and sludge stores within the swine lagoon. Sensitivity analysis within the model, demonstrated that the estrogen input loading from the associated barn facility was the most important factor in controlling estrogen concentrations within the lagoon slurry storage, while the settling rate was the most significant factor in the lagoon sludge storage. The degradation reactions were shown to be minor in both stores based on prediction of average total estrogen concentrations. Management scenario evaluations showed that the best possible management options to reduce estrogen levels in the lagoon are either to adjust the estrogen input loading from swine barn facilities or to effectively enhancing estrogen bonding with suspended solids through the use of organic polymers or inorganic coagulants. PMID:24798317

Methane fluxes from tropical coastal lagoons surrounded by mangroves, Yucatán, Mexico

NASA Astrophysics Data System (ADS)

Chuang, P.-C.; Young, M. B.; Dale, A. W.; Miller, L. G.; Herrera-Silveira, J. A.; Paytan, A.

2017-05-01

Methane concentrations in the water column and emissions to the atmosphere were determined for three tropical coastal lagoons surrounded by mangrove forests on the Yucatán Peninsula, Mexico. Surface water dissolved methane was sampled at different seasons over a period of 2 years in areas representing a wide range of salinities and anthropogenic impacts. The highest surface water methane concentrations (up to 8378 nM) were measured in a polluted canal associated with Terminos Lagoon. In Chelem Lagoon, methane concentrations were typically lower, except in the polluted harbor area (1796 nM). In the relatively pristine Celestún Lagoon, surface water methane concentrations ranged from 41 to 2551 nM. Methane concentrations were negatively correlated with salinity in Celestún, while in Chelem and Terminos high methane concentrations were associated with areas of known pollution inputs, irrespective of salinity. The diffusive methane flux from surface lagoon water to the atmosphere ranged from 0.0023 to 15 mmol CH4 m-2 d-1. Flux chamber measurements revealed that direct methane release as ebullition was up to 3 orders of magnitude greater than measured diffusive flux. Coastal mangrove lagoons may therefore be an important natural source of methane to the atmosphere despite their relatively high salinity. Pollution inputs are likely to substantially enhance this flux. Additional statistically rigorous data collected globally are needed to better consider methane fluxes from mangrove-surrounded coastal areas in response to sea level changes and anthropogenic pollution in order to refine projections of future atmospheric methane budgets.

Fingerprints of lagoonal life: Migration of the marine flatfish Solea solea assessed by stable isotopes and otolith microchemistry

NASA Astrophysics Data System (ADS)

Dierking, Jan; Morat, Fabien; Letourneur, Yves; Harmelin-Vivien, Mireille

2012-06-01

The commercially important marine flatfish common sole (Solea solea) facultatively uses NW Mediterranean lagoons as nurseries. To assess the imprint left by the lagoonal passage, muscle carbon (C) and nitrogen (N) isotope values of S. solea juveniles caught in Mauguio lagoon in spring (shortly after arrival from the sea) and in autumn (before the return to the sea) were compared with values of juveniles from adjacent coastal marine nurseries. In addition, in the lagoon, sole otolith stable isotope (C and oxygen (O)) and elemental (11 elements) composition in spring and autumn, and the stable isotope composition (C and N) of organic matter sources in autumn, were determined. Overall, our data indicate that a distinct lagoonal signature existed. Specifically, lagoon soles showed a strong enrichment in muscle tissue 15N (>6‰) compared to their coastal relatives, likely linked to sewage inputs (see below), and a depletion in 13C (1-2‰), indicative of higher importance of 13C depleted terrestrial POM in the lagoon compared to coastal nurseries. In addition, over the time spent in the lagoon, sole otolith δ13C and δ18O values and otolith elemental composition changed significantly. Analysis of the lagoon sole foodweb based on C and N isotopes placed sediment particulate organic matter (POM) at the base. Seagrasses, formerly common but in decline in Mauguio lagoon, played a minor role in the detritus cycle. The very strong 15N enrichment of the entire foodweb (+7 to +11‰) compared to little impacted lagoons and coastal areas testified of important human sewage inputs. Regarding the S. solea migration, the analysis of higher turnover and fast growth muscle tissue and metabolically inert and slower growth otoliths indicated that soles arrived at least several weeks prior to capture in spring, and that no migrations took place in summer. In the autumn, the high muscle δ15N value acquired in Mauguio lagoon would be a good marker of recent return to the sea, whereas

Taphonomy of coral reefs from Southern Lagoon of Belize

DOE Office of Scientific and Technical Information (OSTI.GOV)

Westphall, M.J.; Ginsburg, R.N.

1985-02-01

The Southern Lagoon of the Belize barrier complex, an area of some 600 km/sup 2/, contains a tremendous number of lagoon reefs, which range in size from patches several meters across to rhomboidal-shaped structures several kilometers in their long dimension. These lagoon reefs are remarkable because they have Holocene sediment accumulations in excess of 13 m consisting almost entirely of coral debris and lime mud and sand, and rise up to 30 m above the surrounding lagoon floor with steeply sloping sides (50-80/sup 0/), yet are totally uncemented. The reef-building biota and their corresponding deposits were studied at a representativemore » reef, the rhomboidal complex of Channel Cay. As with many of the reefs in this area, the steeply sloping flanks of Channel Cay are covered mainly by the branched staghorn coral Acropora cervicornis and ribbonlike and platy growth of Agaricia spp. The living corals are not cemented to the substrate, but are merely intergrown. Fragmented pieces of corals accumulate with an open framework below the living community; this open framework is subsequently infilled by lime muds and sands produced mainly from bioerosion. Results from probing and coring suggest that the bafflestone fabric of coral debris and sediment extends at least 13 m into the subsurface. Radiocarbon-age estimates indicate these impressive piles of coral rubble and sediment have accumulated in the past 9000 yr (giving a minimum accumulation rate of 1.4 m/1000 yr) and illustrate the potential for significant carbonate buildups without the need for early lithification.« less

Nile Red Detection of Bacterial Hydrocarbons and Ketones in a High-Throughput Format

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pinzon, NM; Aukema, KG; Gralnick, JA

A method for use in high-throughput screening of bacteria for the production of long-chain hydrocarbons and ketones by monitoring fluorescent light emission in the presence of Nile red is described. Nile red has previously been used to screen for polyhydroxybutyrate (PHB) and fatty acid esters, but this is the first report of screening for recombinant bacteria making hydrocarbons or ketones. The microtiter plate assay was evaluated using wild-type and recombinant strains of Shewanella oneidensis and Escherichia coli expressing the enzyme OleA, previously shown to initiate hydrocarbon biosynthesis. The strains expressing exogenous Stenotrophomonas maltophilia oleA, with increased levels of ketone productionmore » as determined by gas chromatography-mass spectrometry, were distinguished with Nile red fluorescence. Confocal microscopy images of S. oneidensis oleA-expressing strains stained with Nile red were consistent with a membrane localization of the ketones. This differed from Nile red staining of bacterial PHB or algal lipid droplets that showed intracellular inclusion bodies. These results demonstrated the applicability of Nile red in a high-throughput technique for the detection of bacterial hydrocarbons and ketones. IMPORTANCE In recent years, there has been renewed interest in advanced biofuel sources such as bacterial hydrocarbon production. Previous studies used solvent extraction of bacterial cultures followed by gas chromatography-mass spectrometry (GC-MS) to detect and quantify ketones and hydrocarbons (Beller HR, Goh EB, Keasling JD, Appl. Environ. Microbiol. 76: 1212-1223, 2010; Sukovich DJ, Seffernick JL, Richman JE, Gralnick JA, Wackett LP, Appl. Environ. Microbiol. 76: 3850-3862, 2010). While these analyses are powerful and accurate, their labor-intensive nature makes them intractable to high-throughput screening; therefore, methods for rapid identification of bacterial strains that are overproducing hydrocarbons are needed. The use of high

Biodiversity patterns of macrophyte and macroinvertebrate communities in two lagoons of Western Greece.

NASA Astrophysics Data System (ADS)

Fyttis, G.; Reizopoulou, S.; Papastergiadou, E.

2012-04-01

Aquatic macrophytes and benthic macroinvertebrates were studied seasonally (Spring, Autumn, Summer) between the years 2009 - 2011 in two coastal lagoons (Kotychi and Prokopos) located in Peloponnese, Greece, in order to investigate spatial and temporal biodiversity trends related to hydrological processes (degree of confinement, nitrates, phosphates, chl-a, total suspended materials, light irradiance, pH, salinity, temperature and dissolved oxygen). Kotychi lagoon presents a better communication with the sea, while Prokopos has a high degree of confinement. Both ecosystems seasonally receive freshwater input from streams. The submerged aquatic macrophytes constituted a major component of the ecosystems studied. In total, 22 taxa of aquatic macrophytes (angiosperms and macroalgae), 16 taxa for Kotychi (2 Rhodophyta, 8 Chlorophyta, 5 Magnoliophyta, 1 Streptophyta) and 14 taxa for Prokopos (1 Rhodophyta, 5 Chlorophyta, 5 Magnoliophyta, 3 Streptophyta) were found. Ruppia cirrhosa, and Potamogeton pectinatus were dominant in both lagoons. Kotychi lagoon was also dominated by Zostera noltii and Prokopos by Zannichellia pallustris ssp. pedicellata, while the biomass of aquatic species peaked during the summer periods, in both lagoons. The total number of macroinvertebrates found in the lagoons was 28 taxa for Kotychi and 19 for Prokopos. Chironomidae were dominant in both lagoons, while Kotychi was also dominated by Lekanesphaera monodi and Monocorophium insidiosum, and Prokopos by Ostracoda and Lekanesphaera monodi. Benthic diversity ranged from 1.33 to 2.57 in Kotychi and from 0.67 to 2.48 in Prokopos. Species richness, diversity, and abundance of benthic macroinvertebrates were strongly related to aquatic vegetation and to the degree of communication with the marine environment. Moreover, species richness and abundance of both macrophytes and macroinvertebrates were mainly dependent on depth, temperature, pH and concentration of total suspended materials (TSM). Results

Virus isolations and high population density implicate Culex antennatus (Becker) (Diptera: Culicidae) as a vector of Rift Valley Fever virus during an outbreak in the Nile Delta of Egypt.

PubMed

Hanafi, Hanafi A; Fryauff, David J; Saad, Magdi D; Soliman, Atef K; Mohareb, Emad W; Medhat, Iman; Zayed, Abdel Basset; Szumlas, Daniel E; Earhart, Kenneth C

2011-08-01

In June, 2003, Egypt's hospital-based electronic disease surveillance system began to record increased cases of acute febrile illness from governorates in the Nile Delta. In response to a request for assistance from the Egyptian Ministry of Health and the World Health Organization (WHO), the U.S. Naval Medical Research Unit No. 3 (NAMRU-3) provided assistance in identifying the cause and extent of this outbreak. Testing of human clinical samples (n=375) from nine governorates in Egypt identified 29 cases of RVF viremia that spanned the period of June to October, and a particular focus of disease in Kafr el Sheikh governorate (7.7% RVF infection rate). Veterinary samples (n=101) collected during this time in Kafr el Sheikh and screened by immunoassay for RVFV-specific IgM identified probable recent infections in cattle (10.4%) and sheep (5%). Entomologic investigations that focused in rural, rice growing villages in the Sidi Salim District of Kafr el Sheikh during August-September, 2003, collected, identified, and tested host-seeking female mosquitoes for the presence of pathogenic viruses. Three isolates of RVF virus (RVFV) were obtained from 297 tested pools of female mosquitoes and all three RVFV isolates came from Cx. antennatus (Becker). While Cx. pipiens has been considered the primary vector of RVF virus in Egypt and is often the most common man-biting species found, Cx. antennatus was the dominant species captured at the 2003 outbreak location in Kafr el Sheikh governorate. This is the first time that Cx. antennatus has been found naturally infected with RVFV in Egypt. Published by Elsevier B.V.

Observations of emperor geese feeding at Nelson Lagoon, Alaska

USGS Publications Warehouse

Petersen, Margaret R.

1983-01-01

Estuaries along the north side of the Alaska Peninsula provide essential habitat for most of the American population of Emperor Goose (Chen canagica) during migration (Petersen and Gill 1982). Most of the population passes through Nelson Lagoon in spring and fall, with over 40,000 birds recorded there (Gill et al 1981). Little is known about the feeding activity of Emperor Geese while they are in estuaries, and the importance of estuaries as staging areas during spring and fall migration is poorly understood. Here I report observations on the feeding activity of emperor Geese at one estuary (Nelson Lagoon).

Hydro-economic Risk Assessment in the Eastern Nile River Basin

NASA Astrophysics Data System (ADS)

Arjoon, D.; Tilmant, A.; Mohamed, Y.

2013-12-01

In 2011, the Ethiopian government announced plans for the construction of the Grand Renaissance Dam (GRD) on the Blue Nile, just east of its border with Sudan, at a cost of almost 5 billion dollars. The project is expected to generate over 15 TWh of energy and will include a reservoir of more than 60 km3 capacity, which roughly corresponds to the average annual flow of the Blue Nile. This project is part of a larger scheme, by the government, to expand its hydroelectric power capacity, however, the scheme faces strong opposition from downstream Egypt and Sudan. Egypt and Sudan are highly dependent on flows that originate in Ethiopia (it has been estimated that 86% of Nile flow originates in the Ethiopian highlands). The Ethiopian government argues that the dam would supply electricity for Ethiopians as well as generate surplus energy for export to neighboring countries. The Ethiopians also argue that the huge reservoir would generate positive externalities downstream by reducing floods and providing more constant and predictable lows. This study attempts to provide an independent analysis of the hydrologic and economic risks faced by downstream countries when GRD will be online. To achieve this, an integrated, stochastic hydro-economic model of the entire Eastern Nile basin is used to analyze various development and management scenarios. The results indicate that if countries agree to co- operative management of the Eastern Nile River basin, GRD would indeed significantly increase basin-wide benefits, especially in Ethiopia and in Sudan. An alternative management scenario, whereby GRD would be operated by Sudan and Egypt, does not yield significant economic gains in these countries. However, massive unilateral irrigation developments in Ethiopia will be detrimental for all countries, including Ethiopia itself, due to the huge opportunity costs involved.

Analysis of YouTube as a Source of Information for West Nile Virus Infection

PubMed Central

Dubey, Divyanshu; Amritphale, Amod; Sawhney, Anshudha; Dubey, Devashish; Srivastav, Nupur

2014-01-01

Introduction A major outbreak of West Nile Virus was seen last year in different parts of the United States. Adequate dissemination of correct information about the disease would have helped decrease its spread and the associated panic in the general population. In this study, we looked into the use of YouTube as a resource for providing information about West Nile Virus infection. Objective This study aims to identify and evaluate YouTube as resource for providing information on West Nile Virus infection to the general public. Methods YouTube was searched on November 25, 2012, using the keywords West Nile Virus epidemic, West Nile Virus infection, and West Nile Virus prevention for videos uploaded in the past 6 months containing relevant information about the disease. The videos were classified as useful, misleading, or as news updates based on the type of information contained. Total viewership, number of days since upload, total duration of videos, and source of upload were noted. Results A total of 106 videos with information on West Nile Virus infection were included in the study, with 79.24% having useful information about the disease. Among the useful videos, 51/84 (60.71%) had information on disease prevention, and 29/84 (34.52%) contained information on news and research updates. The majority of these videos were uploaded by individuals (54.6%) or news agencies (41.8 %). Healthcare agencies contributed only 3.4 % of the total videos. Even though the useful videos represented 72% of all videos, there was significantly higher total viewership and viewership per day for the non-useful videos (P<0.05). Conclusions YouTube may be a significant resource for dissemination of information on public health issues like West Nile virus infection and should be targeted by healthcare agencies for this use. The major drawback of this medium is lack of verification by authorized healthcare professionals before these videos are made available for viewing by the community

Analysis of YouTube as a source of information for West Nile Virus infection.

PubMed

Dubey, Divyanshu; Amritphale, Amod; Sawhney, Anshudha; Dubey, Devashish; Srivastav, Nupur

2014-12-01

A major outbreak of West Nile Virus was seen last year in different parts of the United States. Adequate dissemination of correct information about the disease would have helped decrease its spread and the associated panic in the general population. In this study, we looked into the use of YouTube as a resource for providing information about West Nile Virus infection. This study aims to identify and evaluate YouTube as resource for providing information on West Nile Virus infection to the general public. YouTube was searched on November 25, 2012, using the keywords West Nile Virus epidemic, West Nile Virus infection, and West Nile Virus prevention for videos uploaded in the past 6 months containing relevant information about the disease. The videos were classified as useful, misleading, or as news updates based on the type of information contained. Total viewership, number of days since upload, total duration of videos, and source of upload were noted. A total of 106 videos with information on West Nile Virus infection were included in the study, with 79.24% having useful information about the disease. Among the useful videos, 51/84 (60.71%) had information on disease prevention, and 29/84 (34.52%) contained information on news and research updates. The majority of these videos were uploaded by individuals (54.6%) or news agencies (41.8 %). Healthcare agencies contributed only 3.4 % of the total videos. Even though the useful videos represented 72% of all videos, there was significantly higher total viewership and viewership per day for the non-useful videos (P<0.05). YouTube may be a significant resource for dissemination of information on public health issues like West Nile virus infection and should be targeted by healthcare agencies for this use. The major drawback of this medium is lack of verification by authorized healthcare professionals before these videos are made available for viewing by the community. Hence, a strict caution should be exercised in

HYDROBIOLOGICAL CHARACTERISTICS OF THE COASTAL LAGOONS AT HUGH TAYLOR BIRCH STATE RECREATION AREA, FORT LAUDERDALE, FLORIDA: A HISTORICAL PERSPECTIVE.

USGS Publications Warehouse

Brock, Robert J.

1987-01-01

The author presents initial results of an ongoing study of Southeast Florida coastal lagoon lakes. Objectives include presenting environmental conditions within and adjacent to the lagoons under a variety of hydrologic conditions and to determine water-quality changes in ground water and surface water and how these changes in water quality affect lagoonal biological communities within the lagoons.

Parasite communities of the neotropical cormorant Phalacrocorax brasilianus (Gmelin) (Aves, Phalacrocoracidae) from two coastal lagoons in Guerrero state, Mexico.

PubMed

Violante-González, Juan; Monks, Scott; Gil-Guerrero, Salvador; Rojas-Herrera, Agustín; Flores-Garza, Rafael; Larumbe-Morán, Edvino

2011-11-01

The parasite community structure of the neotropical cormorant, Phalacrocorax brasilianus, from two lagoons (Coyuca and Tres Palos) from Guerrero state, México, was examined. Fourteen species of adult helminths (6,391 individuals) from 48 cormorants were identified: 9 digeneans, 1 acanthocephalan, 1 cestode, and 3 nematodes. A total of 11 species were collected in Coyuca Lagoon and 12 in Tres Palos Lagoon. Nine species co-occurred in cormorants of both lagoons but, with the exception of Contracaecum multipapillatum and Drepanocephalus olivaceus, species were not equally common in both lagoons. The prevalence values of six species of helminth and the mean abundance of four species varied significantly between lagoons, and C. multipapillatum was numerically dominant in both lagoons. The qualitative similarity between the two communities at the component level was 64%. All cormorants examined were infected, and parasite species richness was 3-5 in Coyuca and 4-9 in Tres Palos lagoon. The results indicate that both communities presented a similar structure at the component level, probably because the cormorants of both lagoons feed on the same species of fish and thus acquire almost the same species of parasites. Differences observed at the infracommunity level were attributed to variations in the degree of dominance of the particular species.

Flushing of a polluted lagoon in Canc'un, using a SIBEO wave-driven seawater pump

NASA Astrophysics Data System (ADS)

Czitrom, Steven; Carbajal, Noel

2006-11-01

The coastal lagoon which adorns the seaside resort at Canc'un, Mexico, is heavily polluted as a result of decades of intense tourist activity development and overwhelmed inadequate planning. The natural flushing time of the lagoon, estimated at 2 to 4 years, is insufficient to cope with the waste that is being dumped and a thick layer of organic matter has accumulated on the lagoon bed. Appropriate legal and sewage treatment measures are imperative to curb further dumping and thus attack the root cause of the problem. This aside, however, the existing situation requires additional technical solutions to restore the ecosystem to a less altered state. A wave and tide driven seawater pump, invented and developed at the National University of Mexico, has been proposed to flush the lagoon with an average 0.2 m^3/s of clean and oxygen rich seawater from the neighboring ocean. This flow would reduce the residence time of the lagoon to around 6 months, promoting long term recovery of the ecosystem. The effect and distribution of the pumped water is being studied using a wind and tide driven 3D numerical model of the lagoon hydrodynamics. Some results from this study are presented here.

Inhibition of microbial metabolism in anaerobic lagoons by selected sulfonamides, tetracyclines, lincomycin, and tylosin tartrate

USGS Publications Warehouse

Loftin, Keith A.; Henny, Cynthia; Adams, Craig D.; Surampali, Rao; Mormile, Melanie R.

2005-01-01

Antibiotics are used to maintain healthy livestock and to promote weight gain in concentrated animal feed operations. Antibiotics rarely are metabolized completely by livestock and, thus, are often present in livestock waste and in waste-treatment lagoons. The introduction of antibiotics into anaerobic lagoons commonly used for swine waste treatment has the potential for negative impacts on lagoon performance, which relies on a consortium of microbes ranging from fermentative microorganisms to methanogens. To address this concern, the effects of eight common veterinary antibiotics on anaerobic activity were studied. Anaerobic microcosms, prepared from freshly collected lagoon slurries, were amended with individual antibiotics at 10 mg/L for the initial screening study and at 1, 5, and 25 mg/L for the dose-response study. Monitored metabolic indicators included hydrogen, methane, and volatile fatty acid concentrations as well as chemical oxygen demand. The selected antibiotics significantly inhibited methane production relative to unamended controls, thus indicating that antibiotics at concentrations commonly found in swine lagoons can negatively impact anaerobic metabolism. Additionally, historical antibiotic usage seems to be a potential factor in affecting methane production. Specifically, less inhibition of methane production was noted in samples taken from the lagoon with a history of multiple-antibiotic use.

Inhibition of microbial metabolism in anaerobic lagoons by selected sulfonamides, tetracyclines, lincomycin, and tylosin tartrate.

PubMed

Loftin, Keith A; Henny, Cynthia; Adams, Craig D; Surampali, Rao; Mormile, Melanie R

2005-04-01

Antibiotics are used to maintain healthy livestock and to promote weight gain in concentrated animal feed operations. Antibiotics rarely are metabolized completely by livestock and, thus, are often present in livestock waste and in waste-treatment lagoons. The introduction of antibiotics into anaerobic lagoons commonly used for swine waste treatment has the potential for negative impacts on lagoon performance, which relies on a consortium of microbes ranging from fermentative microorganisms to methanogens. To address this concern, the effects of eight common veterinary antibiotics on anaerobic activity were studied. Anaerobic microcosms, prepared from freshly collected lagoon slurries, were amended with individual antibiotics at 10 mg/L for the initial screening study and at 1, 5, and 25 mg/L for the dose-response study. Monitored metabolic indicators included hydrogen, methane, and volatile fatty acid concentrations as well as chemical oxygen demand. The selected antibiotics significantly inhibited methane production relative to unamended controls, thus indicating that antibiotics at concentrations commonly found in swine lagoons can negatively impact anaerobic metabolism. Additionally, historical antibiotic usage seems to be a potential factor in affecting methane production. Specifically, less inhibition of methane production was noted in samples taken from the lagoon with a history of multiple-antibiotic use.

Sludge reduction and water quality improvement in anaerobic lagoons through influent pre-treatment

USDA-ARS?s Scientific Manuscript database

Confined swine production generates large volumes of wastewater typically stored and treated in anaerobic lagoons. These lagoons may require cleanup and closure measures in the future. In practice, liquid and sludge need to be removed by pumping, usually at great expense of energy, and land applied ...

Developing a model for the mercury cycle in the Marano-Grado Lagoon (Italy)

EPA Science Inventory

The Marano-Grado Lagoon is a wetland system of about 160 km2 located in the Northern Adriatic Sea (Italy) between the Tagliamento and the Isonzo River mouths. The lagoon morphology and biogeochemistry are primarily controlled by the exchange with the Adriatic Sea and, to a lesser...

The role of connectivity and hydrodynamic conditions in the configuration of ichthyoplankton assemblages in coastal lagoons

NASA Astrophysics Data System (ADS)

Pérez-Ruzafa, Angel; Quispe, Jhoni I.; Umgiesser, Georg; Ghezzo, Michol; De Pascalis, Francesca; Marcos, Concepción

2014-05-01

Fish assemblages in coastal lagoons are constituted by species with different gilds and life stories including estuarine residents but also a high percentage of marine stragglers and marine migrants. Previous studies showed that different ichthyoplancton assemblages can be identified inside a lagoon, depending on hydrological conditions, but at the same time a high spatial and temporal variability haven observed. The proposed models to explain lagoon assemblages configuration based on probabilities of colonization from the open sea involves an important stochastic component and introduces some randomness that could lead to that high spatial and temporal variability at short and long-term scales. In this work we analyze the relationship between ichthyoplankton assemblages in the Mar Menor lagoon and the adjacent open sea in the framework of the hydrodynamics of the lagoon and connectivity between sampling stations using hydrodynamic models. The results, show a complex interaction between the different factors that lead to a highly variable system with high accumulated richness and diversity of species, and a large proportion of occasional visitors and stragglers suggesting that the mechanisms of competitive lottery can play an important role in the maintenance of communities of coastal lagoons , where environmental variability occurs in a system with strong differences in colonization rates and connectivity, not only with the open sea, but also between locations within the lagoon.

CISOCUR - Hydrodynamic circulation in the Curonian Lagoon inferred through stable isotope measurements and numerical modelling

NASA Astrophysics Data System (ADS)

Umgiesser, Georg; Razinkovas-Baziukas, Arturas; Barisevičiūtė, Ruta; Baziukė, Dalia; Ertürk, Ali; Gasiūnaitė, Jovita; Gulbinskas, Saulius; Lubienė, Irma; Maračkinaite, Jurgita; Petkuvienė, Jolita; Pilkaitytė, Renata; Ruginis, Tomas; Zemlys, Petras; Žilius, Mindaugas

2013-04-01

The spatial pattern of the hydrodynamic circulation of the Curonian lagoon, the largest European coastal lagoon, is still little understood. In absence of automatic current registration data all the existing models relied mostly on such data as water levels leaving high level of uncertainty. Here we present CISOCUR, a new project financed by the European Social Fund under the Global Grant measure. The project applies a new methodology that uses the carbon stable isotope (SI) ratio of C12 and C13 that characterize different water sources entering the lagoon and may be altered by internal kinetic processes. Through the tracing of these isotope ratios different water masses can be identified. This gives the possibility to validate several hypotheses of water circulation and validate hydrodynamic models. In particular it will be possible to 1) trace water masses entering the lagoon through the Nemunas and the Klaipeda strait; 2) test the hypothesis of sediment transport mechanisms inside the lagoon; 3) evaluate the importance of physical forcing on the lagoon circulation. The use of a hydrodynamic finite element model, coupled with the SI method, will allow for a realistic description of the transport processes inside the Curonian lagoon. So the main research goal is to apply the stable isotope tracers and a finite element model to determine the circulation patterns in the Curonian lagoon. Overall, the project will develop according to 4 main phases: 1) A pilot study to measure the isotope composition of different carbon compounds (dissolved and suspended) in different water bodies that feed water into the central lagoon. Through this pilot study the optimal study sites for the seasonal campaign will be identified as well. 2) Seasonal field campaigns in the monitoring stations identified in phase 1 to measure the carbon isotope ratio. 3) Development of a model that describes the kinetics of carbon isotopes and its transformation. 4) Application of a hydrodynamic model

Metazoan parasites of fishes from the Celestun coastal lagoon, Yucatan, Mexico.

PubMed

Sosa-Medina, Trinidad; Vidal-Martínez, Víctor M; Aguirre-Macedo, M Leopoldina

2015-08-31

The aims of this study were to produce a checklist of the metazoan parasites of fishes from the Celestun coastal lagoon and to determine the degree of faunal similarity among the fishes based on the metazoan parasites they share. A checklist was prepared including all available records (1996-2014) of parasites of marine, brackish water and freshwater fishes of the area. All of these data were included in a presence/absence database and used to determine similarity via Jaccard's index. The results indicate the presence of 62 metazoan parasite species infecting 22 fish species. The number of metazoan parasite species found in the fishes from the Celestún lagoon is apparently the highest reported worldwide for a tropical coastal lagoon. The parasites included 12 species of adult digeneans, 27 digeneans in the metacercarial stage, 6 monogeneans, 3 metacestodes, 9 nematodes, 2 acanthocephalans, 2 crustaceans and 1 annelid. Forty parasite species were autogenic and 23 were allogenic and 1 unknown. The overall similarity among all of the species of fish with respect to the metazoan parasites they share was low (0.08 ± 0.12), with few similarity values above 0.4 being obtained. This low similarity was due primarily to the presence of suites of parasites exclusive to specific species of fish. The autogenic component of the parasite fauna (40 species) dominated the allogenic component (21 species). The most likely explanation for the large number of fish parasites found at Celestún is the good environmental condition of the lagoon, which allows the completion of parasite life cycles and free circulation of euryhaline fishes from the marine environment bringing marine parasites into the lagoon.

Long-Term Neurological Outcomes in West Nile Virus–Infected Patients: An Observational Study

PubMed Central

Weatherhead, Jill E.; Miller, Vicki E.; Garcia, Melissa N.; Hasbun, Rodrigo; Salazar, Lucrecia; Dimachkie, Mazen M.; Murray, Kristy O.

2015-01-01

The Houston West Nile Cohort (HWNC) was founded in 2002 when West Nile virus (WNV) reached Houston, TX. The long-term outcomes following WNV infection are still mostly unknown, though neurological abnormalities up to 1 year postinfection have been documented. We report an observational study of neurological abnormalities at 1–3 and 8–11 years following WNV infection in the HWNC. We conducted standard neurological examinations at two separate time points to assess changes in neurological status over time. The majority of patients (86%, 30/35) with encephalitis had abnormal neurological exam findings at the time of the first assessment compared with uncomplicated fever (27%, 3/11) and meningitis (36%, 5/14) cases. At the time of the second assessment, 57% (4/7) of West Nile fever (WNF), 33% (2/6) of West Nile meningitis (WNM), and 36% (5/14) of West Nile encephalitis (WNE) had developed new neurological complications. The most common abnormalities noted were tandem gait, hearing loss, abnormal reflexes, and muscle weakness. Long-term neurological abnormalities were most commonly found in patients who experienced primary WNV encephalitis. New abnormalities may develop over time regardless of initial clinical infection. Future studies should aim to differentiate neurological consequences due to WNV neuroinvasive infection versus neurological decline related to comorbid conditions. PMID:25802426

Sediment characteristics and water quality in the two hyper-saline lagoons along the Red Sea coast of Saudi Arabia

NASA Astrophysics Data System (ADS)

Rasul, Najeeb; Al-Farawati, Radwan; Al-Harbi, Omer; Naser Qutub, Abdul

2013-04-01

The two hyper-saline Shoaiba lagoons, Khawr ash Shaibah al Masdudah (northern lagoon) and Khawr ash Shaibah al Maftuhah (southern lagoon) have a unique environmental set-up because no rivers or wadis flow into the lagoons and therefore detrital material to the lagoons is lacking and most of the sediments are indigenous carbonates. The biogenic material is mostly derived from coral debris, coralline algae and molluscs abundant in gravel and sand size fractions. The evaporite deposits from the adjoining sabkhas are transported to the lagoon during tidal cycles. Carbonate is abundant in the form of aragonite and High Mg-calcite indicating carbonate to be recent and formed under shallow water conditions. In general, the sediments are the result of the mechanical breakdown of molluscs and coral reefs by either human activity or by coral boring marine organisms and physical processes such as tidal and wind generated currents. Strong currents dominate only the deeper part at the entrance of the lagoons that causes the winnowing of the finer sediments, and its transportation during flooding and ebbing. Shallow depths averaging 3 m, wind and tidal stirring are the main forces preventing the lagoons from developing stratification resulting in a well-mixed body of water. The shallow depth of the lagoons keep the turbidity levels higher, whereas salinity as high as 52 ‰ and water temperature as high as 38 °C helps in the formation of halite at the periphery. The cyclical inundation of sabkhas by a thin sheet of water during tidal cycles is important in understanding the ecological consequence. Mangrove stands in the lagoons act as a source of nutrients to the flora and fauna inhabiting the lagoons. The configurations of the mouth of the lagoons influence the tidal currents, including the sediment and water movement. The tidal current is enhanced as it enters the lagoons, in response to the funneling effect caused by the narrow channel. The current diffuses as the entrance

Into the Depths of the Lagoon Nebula

NASA Image and Video Library

2011-09-16

Swirling dust clouds and bright newborn stars dominate the view in this image of the Lagoon nebula from NASA Spitzer Space Telescope. The nebula lies in the general direction of the center of our galaxy in the constellation Sagittarius.

Tidal dynamics in a changing lagoon: Flooding or not flooding the marginal regions

NASA Astrophysics Data System (ADS)

Lopes, Carina L.; Dias, João M.

2015-12-01

Coastal lagoons are low-lying systems under permanent changes motivated by natural and anthropogenic factors. Ria de Aveiro is such an example with its margins currently threatened by the advance of the lagoonal waters recorded during the last decades. This work aims to study the tidal modifications found between 1987 and 2012 in this lagoon, motivated by the main channels deepening which induce higher inland tidal levels. Additionally it aims to study the impact that protective walls designed to protect the margins against flooding may have in those modifications under sea level rise predictions. The hydrodynamic model ELCIRC previously calibrated for Ria de Aveiro was used and tidal asymmetry, tidal ellipses and residual currents were analyzed for different scenarios, considering the mean sea level rise predicted for 2100 and the implementation of probable flood protection walls. Results evidenced that lagoon dominance remained unchanged between 1987 and 2012, but distortion decreased/increased in the deeper/shallower channels. The same trend was found under mean sea level rise conditions. Tidal currents increased over this period inducing an amplification of the water properties exchange within the lagoon, which will be stronger under mean sea level rise conditions. The deviations between scenarios with or without flood protection walls can achieve 60% for the tidal distortion and residual currents and 20% for the tidal currents, highlighting that tidal properties are extremely sensitive to the lagoon geometry. In summary, the development of numerical modelling applications dedicated to study the influence of mean sea level rise on coastal low-lying systems subjected to human influence should include structural measures designed for flood defence in order to accurately predict changes in the local tidal properties.

A Trophic Model of a Sandy Barrier Lagoon at Chiku in Southwestern Taiwan

NASA Astrophysics Data System (ADS)

Lin, H.-J.; Shao, K.-T.; Kuo, S.-R.; Hsieh, H.-L.; Wong, S.-L.; Chen, I.-M.; Lo, W.-T.; Hung, J.-J.

1999-05-01

Using the ECOPATH 3.0 software system, a balanced trophic model of a sandy barrier lagoon with intensive fishery activities at Chiku in tropical Taiwan was constructed. The lagoon model comprised 13 compartments. Trophic levels of the compartments varied from 1·0 for primary producers and detritus to 3·6 for piscivorous fish. Hanging-cultured oysters accounted for 39% of the harvestable fishery biomass and were the most important fishery species. The most prominent group in terms of biomass and energy flow in the lagoon was herbivorous zooplankton. Manipulations of the biomass of herbivorous zooplankton would have a marked impact on most compartments. Both total system throughput and fishery yield per unit area were high when compared to other reported marine ecosystems. This appears mainly due to high planktonic primary production, which is probably promoted by enriched river discharges draining mangroves and aquaculture ponds. Consequently, more than half of the total system throughput originates from primary producers in the lagoon. Although half of the primary production was not immediately used by upper trophic levels and flowed into the detrital pool, most of the detritus was directly consumed, passed up the food web and was exported to the fishery. Thus only a small proportion of energy was recycled through detritus pathways. This mechanism produces short pathways with high trophic efficiencies at higher trophic levels. The high fishery yield in the lagoon is due to high primary production and short pathways. This is the first model of a tropical sandy barrier lagoon with intensive fishery activities and thus may serve as a basis for future comparisons and ecosystem management.

The Complete Sequence of a West Nile Virus Lineage 2 Strain Detected in a Hyalomma marginatum marginatum Tick Collected from a Song Thrush (Turdus philomelos) in Eastern Romania in 2013 Revealed Closest Genetic Relationship to Strain Volgograd 2007

PubMed Central

Kolodziejek, Jolanta; Marinov, Mihai; Kiss, Botond J.; Alexe, Vasile; Nowotny, Norbert

2014-01-01

In this study the first complete sequence of the West Nile virus (WNV) lineage 2 strain currently circulating in Romania was determined. The virus was detected in a Hyalomma marginatum marginatum tick collected from a juvenile song thrush (Turdus philomelos) in the Romanian Danube Delta close to the city of Tulcea, end of August 2013. Our finding emphasizes the role of ticks in introduction and maintenance of WNV infections. Sequence analyses revealed close genetic relationship of the Romanian WNV strain to strain Reb_Volgograd_07_H, which was isolated from human brain tissue during an outbreak of West Nile neuroinvasive disease (WNND) in Russia in 2007. In 2010 the Eastern European lineage 2 WNV caused an outbreak of human WNND in Romania. Partial sequences from subsequent years demonstrated that this WNV strain became endemic in Eastern Europe and has been causing outbreaks of varying sizes in southern Russia since 2007 and in Romania since 2010. PMID:25279973

Alexander the Great and West Nile virus encephalitis.

PubMed

Marr, John S; Calisher, Charles H

2003-12-01

Alexander the Great died in Babylon in 323 BC. His death at age 32 followed a 2-week febrile illness. Speculated causes of death have included poisoning; assassination, and a number of infectious diseases. One incident, mentioned by Plutarch but not considered by previous investigators, may shed light on the cause of Alexander's death. The incident, which occurred as he entered Babylon, involved a flock of ravens exhibiting unusual behavior and subsequently dying at his feet. The inexplicable behavior of ravens is reminiscent of avian illness and death weeks before the first human cases of West Nile virus infection were identified in the United States. We posit that Alexander may have died of West Nile virus encephalitis.

Alexander the Great and West Nile Virus Encephalitis

PubMed Central

Marr, John S.

2003-01-01

Alexander the Great died in Babylon in 323 BC. His death at age 32 followed a 2-week febrile illness. Speculated causes of death have included poisoning, assassination, and a number of infectious diseases. One incident, mentioned by Plutarch but not considered by previous investigators, may shed light on the cause of Alexander’s death. The incident, which occurred as he entered Babylon, involved a flock of ravens exhibiting unusual behavior and subsequently dying at his feet. The inexplicable behavior of ravens is reminiscent of avian illness and death weeks before the first human cases of West Nile virus infection were identified in the United States. We posit that Alexander may have died of West Nile encephalitis. PMID:14725285

Mutually beneficial and sustainable management of Ethiopian and Egyptian dams in the Nile Basin

NASA Astrophysics Data System (ADS)

Habteyes, Befekadu G.; Hasseen El-bardisy, Harb A. E.; Amer, Saud A.; Schneider, Verne R.; Ward, Frank A.

2015-10-01

Ongoing pressures from population growth, recurrent drought, climate, urbanization and industrialization in the Nile Basin raise the importance of finding viable measures to adapt to these stresses. Four tributaries of the Eastern Nile Basin contribute to supplies: the Blue Nile (56%), White Nile-Albert (14%), Atbara (15%) and Sobat (15%). Despite much peer reviewed work addressing conflicts on the Nile, none to date has quantitatively examined opportunities for discovering benefit sharing measures that could protect negative impacts on downstream water users resulting from new upstream water storage developments. The contribution of this paper is to examine the potential for mutually beneficial and sustainable benefit sharing measures from the development and operation of the Grand Ethiopian Renaissance Dam while protecting baseline flows to the downstream countries including flows into the Egyptian High Aswan Dam. An integrated approach is formulated to bring the hydrology, economics and institutions of the region into a unified framework for policy analysis. A dynamic optimization model is developed and applied to identify the opportunities for Pareto Improving measures to operate these two dams for the four Eastern Nile Basin countries: Ethiopia, South Sudan, Sudan, and Egypt. Results indicate a possibility for one country to be better off (Ethiopia) and no country to be worse off from a managed operation of these two storage facilities. Still, despite the optimism of our results, considerable diplomatic negotiation among the four riparians will be required to turn potential gains into actual welfare improvements.

Biodegradation of hexadecane using sediments from rivers and lagoons of the Southern Gulf of Mexico.

PubMed

García-Cruz, N Ulises; Sánchez-Avila, Juan I; Valdés-Lozano, David; Gold-Bouchot, Gerardo; Aguirre-Macedo, Leopoldina

2018-03-01

The Southern Gulf of Mexico is an area highly impacted by crude oil extraction, refining activities and the presence of natural petroleum seepage. Oceanic currents in the Gulf of Mexico continually facilitate the transport of hydrocarbons to lagoons and rivers. This research evaluated hexadecane (HXD) degradation in marine sediment samples from lagoons and rivers that are fed by the Southern Gulf of Mexico, specifically six samples from rivers, three samples from lagoons, and one sample from a marine outfall. The highest rates of biodegradation were observed in sediments from the mouths of the Gonzalez River and the Champotón Lagoon. The lowest consumption rate was found in sediment from the mouth of the Coatzacoalcos River. With regards to the Ostión Lagoon and the Grijalva River, there was a low rate of consumption, but a high efficiency of degradation which took place at the end of the experiments. No correlation was found between the consumption rate and the environmental physicochemical parameters. Copyright © 2018 Elsevier Ltd. All rights reserved.

Wetland Change Detection in Protected and Unprotected Indus Coastal and Inland Delta

NASA Astrophysics Data System (ADS)

Baig, M. H. Ali; Sultan, M.; Riaz Khan, M.; Zhang, L.; Kozlova, M.; Malik, N. Abbas; Wang, S.

2017-09-01

Worth of wetland sites lies in their ecological importance. They enhance ecosystem via provision of ecological services like improving water quality, groundwater infiltration, flood risk reduction and biodiversity regulation. Like other parts of the world Pakistan is also facing wetlands degradation. Ecological and economic significance of wetlands was recognized officially in 1971 as Pakistan became signatory of Ramsar wetland convention. Wetlands provide habitat to species of ecological and economic importance. Despite being recognized for international importance, Ramsar figures state that almost half of Pakistan's wetlands are at moderate or prominent level threat. Wetlands ecosystems are deteriorating at a rapid rate, if uncontrolled this trend may lead to substantial losses. Therefore, management of these resources demands regular monitoring. Present study is dedicated to assessing levels of change overtime in three distinct types of wetlands in Pakistan i.e. Indus delta a coastal wetland, Uchhali complex an inland wetland which are both protected sites while another site Nurri Lagoon which is not sheltered under any category of protected areas. Remotely sensed data has remarkable applications in change detection. Multitemporal Landsat images were used to map changes occurring from 2006 to 2016. Results reveal that wetland area has considerably decreased for all types. Both protected sites have experienced degradation though impact is comparatively lesser than unprotected Nurri lagoon. Significance of protection strategies cannot be denied, it is recommended that mere declaration of a site protected area is not sufficient. It is equally important to control non-point pollutants and ensuring the compliance of conservation strategy.

78 FR 16505 - Prospective Grant of Exclusive License: Chimeric West Nile/Dengue Viruses

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-15

... Grant of Exclusive License: Chimeric West Nile/Dengue Viruses AGENCY: Centers for Disease Control and... giving an exclusive license, in the field of use of in vitro diagnostics for dengue virus infection, to.... Provisional Application 61/049,342, filed 4/30/2008, entitled ``Engineered, Chimeric West Nile/Dengue Viruses...

Meiobenthic communities in permanently open estuaries and open/closed coastal lagoons of Uruguay (Atlantic coast of South America)

NASA Astrophysics Data System (ADS)

Kandratavicius, N.; Muniz, P.; Venturini, N.; Giménez, L.

2015-09-01

This study aimed to determine if estuarine meiofaunal communities of Uruguay (South America) vary between permanently open estuaries and open/closed coastal lagoons, or if they respond to the sediment composition. In Uruguay, estuaries and coastal lagoons vary in the degree of connectivity to the sea and in the sediment composition; sediments in estuaries are characterized by fine-medium sands but sediments vary from lagoon to lagoon (either fine-medium or coarse sand). Taxa richness (total = 16) showed less temporal variability in lagoons than in estuaries, due to patterns of presence/absence of the less abundant taxa. However, no major response to habitat was found in the most abundant groups: polychaetes (6% of total fauna) were on average 5% more abundant in lagoons than in estuaries. Some level of zonation, within estuaries and lagoons, was found in the most abundant groups, nematodes (63% of total fauna) and copepods (15%) in response to medium and fine sands. In addition, sediment type modulated seasonal patterns in the frequency of presence/absence in ostracods, polychaetes and oligochaetes. For instance, in polychaetes and ostracods the increase in the frequency of absences, occurring from summer to winter, was stronger in lagoons and estuaries dominated by fine sands. The lagoon habitat appears to ameliorate the effects of unfavourable (winter) conditions in less abundant meiofaunal taxa. In summary, sediment fractions explain spatial patterns in the average abundance of organisms (e.g. nematodes) as well as the seasonal changes in frequency of presence/absence (e.g. polychaetes).

Vadose Zone Monitoring of Dairy Green Water Lagoons using Soil Solution Samplers.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brainard, James R.; Coplen, Amy K

2005-11-01

Over the last decade, dairy farms in New Mexico have become an important component to the economy of many rural ranching and farming communities. Dairy operations are water intensive and use groundwater that otherwise would be used for irrigation purposes. Most dairies reuse their process/green water three times and utilize lined lagoons for temporary storage of green water. Leakage of water from lagoons can pose a risk to groundwater quality. Groundwater resource protection infrastructures at dairies are regulated by the New Mexico Environment Department which currently relies on monitoring wells installed in the saturated zone for detecting leakage of wastemore » water lagoon liners. Here we present a proposal to monitor the unsaturated zone beneath the lagoons with soil water solution samplers to provide early detection of leaking liners. Early detection of leaking liners along with rapid repair can minimize contamination of aquifers and reduce dairy liability for aquifer remediation. Additionally, acceptance of vadose zone monitoring as a NMED requirement over saturated zone monitoring would very likely significantly reduce dairy startup and expansion costs. Acknowledgment Funding for this project was provided by the Sandia National Laboratories Small Business Assistance Program« less

Optical researches for cyanobacteria bloom monitoring in Curonian Lagoon

NASA Astrophysics Data System (ADS)

Shirshin, Evgeny A.; Budylin, Gleb B.; Yakimov, Boris P.; Voloshina, Olga V.; Karabashev, Genrik S.; Evdoshenko, Marina A.; Fadeev, Victor V.

2016-04-01

Cyanobacteria bloom is a great ecological problem of Curonian Lagoon and Baltic Sea. The development of novel methods for the on-line control of cyanobacteria concentration and, moreover, for prediction of bloom spreading is of interest for monitoring the state of ecosystem. Here, we report the results of the joint application of hyperspectral measurements and remote sensing of Curonian Lagoon in July 2015 aimed at the assessment of cyanobacteria communities. We show that hyperspectral data allow on-line detection and qualitative estimation of cyanobacteria concentration, while the remote sensing data indicate the possibility of cyanobacteria bloom detection using the spectral features of upwelling irradiation.

Acid Tar Lagoons: Management and Recovery

NASA Astrophysics Data System (ADS)

Bohers, Anna; Hroncová, Emília; Ladomerský, Juraj

2017-04-01

This contribution presents the issue with possibility of definitive removal of dangerous environmental burden in Slovakia - serious historical problem of two acid tar lagoons. In relation to their removal, no technology has been found so far - technologically and economically suitable, what caused problems with its management. Locality Predajná is well known in Slovakia by its character of contrasts: it is situated in the picturesque landscape of National Park buffer zone of Nízke Tatry, on the other site it is contaminated by 229 211m3 of acid tar with its characteristics of toxicity, carcinogenicity, teratogenicity, mutagenicity and toxicity especially for animals and plants. Acid tar in two landfills with depth of 1m in case of the first lagoon and 9,5m in case of the second lagoon is a waste product derived from operation of Petrochema Dubová - refinery and petrochemical plant whose activity was to process the crude oil through processes of sulfonation and adsorption technology for producing lubricating and special oils, synthetic detergents and special white oils for cosmetic and medical purposes. A part of acid tar was incinerated in two incineration plats. Concentration of SO2 in combustion gases was too high and it was not possible to decrease it under the value of 2000 mg.mn-3 [LADOMERSKÝ, J. - SAMEŠOVÁ, D.: Reduction in sulfur dioxide emissions waste gases of incineration plant. Acta facultatis ecologiae. 1999, p. 217-223]. That is why it was necessary to put them out of operation. Later, because of public opposition it was not possible to build a new incineration plat corresponding to the state of the art. Even though actual Slovak and European legislative for protection of environment against such impacts, neither of tried methods - bio or non-biologic treatment methods - was proved as suitable for processing or for recovery in the reason of different factors admission: i.e. strong aggressivity, difficulty with handling because of its sludgy and

Assessment of temporal and spatial water quality in international Gomishan Lagoon, Iran, using multivariate analysis.

PubMed

Basatnia, Nabee; Hossein, Seyed Abbas; Rodrigo-Comino, Jesús; Khaledian, Yones; Brevik, Eric C; Aitkenhead-Peterson, Jacqueline; Natesan, Usha

2018-04-29

Coastal lagoon ecosystems are vulnerable to eutrophication, which leads to the accumulation of nutrients from the surrounding watershed over the long term. However, there is a lack of information about methods that could accurate quantify this problem in rapidly developed countries. Therefore, various statistical methods such as cluster analysis (CA), principal component analysis (PCA), partial least square (PLS), principal component regression (PCR), and ordinary least squares regression (OLS) were used in this study to estimate total organic matter content in sediments (TOM) using other parameters such as temperature, dissolved oxygen (DO), pH, electrical conductivity (EC), nitrite (NO 2 ), nitrate (NO 3 ), biological oxygen demand (BOD), phosphate (PO 4 ), total phosphorus (TP), salinity, and water depth along a 3-km transect in the Gomishan Lagoon (Iran). Results indicated that nutrient concentration and the dissolved oxygen gradient were the most significant parameters in the lagoon water quality heterogeneity. Additionally, anoxia at the bottom of the lagoon in sediments and re-suspension of the sediments were the main factors affecting internal nutrient loading. To validate the models, R 2 , RMSECV, and RPDCV were used. The PLS model was stronger than the other models. Also, classification analysis of the Gomishan Lagoon identified two hydrological zones: (i) a North Zone characterized by higher water exchange, higher dissolved oxygen and lower salinity and nutrients, and (ii) a Central and South Zone with high residence time, higher nutrient concentrations, lower dissolved oxygen, and higher salinity. A recommendation for the management of coastal lagoons, specifically the Gomishan Lagoon, to decrease or eliminate nutrient loadings is discussed and should be transferred to policy makers, the scientific community, and local inhabitants.

Assessing hydrological effects of human interventions on coastal systems: numerical applications to the Venice Lagoon

NASA Astrophysics Data System (ADS)

Ferrarin, C.; Ghezzo, M.; Umgiesser, G.; Tagliapietra, D.; Camatti, E.; Zaggia, L.; Sarretta, A.

2012-12-01

The hydrological consequences of historical, contemporary and future human activities on a coastal system were investigated by means of numerical models. The changes in the morphology of the Lagoon of Venice during the last century result from the sedimentological response to the combined effects of human interventions on the environment and global changes. This study focuses on changes from 1927 to 2012 and includes the changes planned for the protection of the city of Venice from storm surges and exceptional tides under future sea level rise scenarios. The application of a hydrodynamic model to simulate the circulation of water masses and the transport of a passive tracer enabled the analysis of the morphodynamic effects on the lagoon circulation and the interaction with the sea. The absolute values of the exchange between the lagoon and sea increased from 1927 to 2002 (from 3900 to 4600 m3 s-1), while the daily fraction of lagoon water volume exchanged decreased. At the same time, the water renewal time shortened from 11.9 to 10.8 days. Morphological changes during the last decade induced an increase of the basin-wide water renewal time (from 10.8 to 11.3 days). In the future, Venice Lagoon will evolve to a more restricted environment due to sea level rise and periodical closure of the lagoon from the sea during flooding events. Simulated scenarios of sea level rise showed that under fall-winter conditions the water renewal time will increased considerably especially in the central part of the lagoon. Furthermore, some considerations on the impact of the hydromorphological changes on the ecological dynamics are proposed.

Temporal coherence among tropical coastal lagoons: a search for patterns and mechanisms.

PubMed

Caliman, A; Carneiro, L S; Santangelo, J M; Guariento, R D; Pires, A P F; Suhett, A L; Quesado, L B; Scofield, V; Fonte, E S; Lopes, P M; Sanches, L F; Azevedo, F D; Marinho, C C; Bozelli, R L; Esteves, F A; Farjalla, V F

2010-10-01

Temporal coherence (i.e., the degree of synchronicity of a given variable among ecological units within a predefined space) has been shown for several limnological features among temperate lakes, allowing predictions about the structure and function of ecosystems. However, there is little evidence of temporal coherence among tropical aquatic systems, where the climatic variability among seasons is less pronounced. Here, we used data from long-term monitoring of physical, chemical and biological variables to test the degree of temporal coherence among 18 tropical coastal lagoons. The water temperature and chlorophyll-a concentration had the highest and lowest temporal coherence among the lagoons, respectively, whereas the salinity and water colour had intermediate temporal coherence. The regional climactic factors were the main factors responsible for the coherence patterns in the water temperature and water colour, whereas the landscape position and morphometric characteristics explained much of the variation of the salinity and water colour among the lagoons. These results indicate that both local (lagoon morphometry) and regional (precipitation, air temperature) factors regulate the physical and chemical conditions of coastal lagoons by adjusting the terrestrial and marine subsidies at a landscape-scale. On the other hand, the chlorophyll-a concentration appears to be primarily regulated by specific local conditions resulting in a weak temporal coherence among the ecosystems. We concluded that temporal coherence in tropical ecosystems is possible, at least for some environmental features, and should be evaluated for other tropical ecosystems. Our results also reinforce that aquatic ecosystems should be studied more broadly to accomplish a full understanding of their structure and function.

Lagoons and Reefs of New Caledonia

NASA Image and Video Library

2011-04-20

NASA image acquired May 10, 2001 In July 2008, the United Nations Educational, Scientific, and Cultural Organization (UNESCO) added 27 new areas to its list of World Heritage sites. One of those areas included the lagoons of New Caledonia. Some 1,200 kilometers (750 miles) east of Australia, this French-governed archipelago contains the world’s third-largest coral reef structure. The coral reefs enclose the waters near the islands in shallow lagoons of impressive biodiversity. On May 10, 2001, the Enhanced Thematic Mapper Plus on NASA’s Landsat 7 satellite captured this image of Île Balabio, off the northern tip of Grande Terra, New Caledonia’s main island. In this natural-color image, the islands appear in shades of green and brown—mixtures of vegetation and bare ground. The surrounding waters range in color from pale aquamarine to deep blue, and the color differences result from varying depths. Over coral reef ridges and sand bars, the water is shallowest and palest in color. Darker shades of blue characterize deeper waters. Reef-enclosed, shallow waters surround Île Balabio, and a larger, semi-enclosed lagoon appears immediately east of that island. Immediately north of Grande Terra, unenclosed, deeper waters predominate. The coral reefs around New Caledonia support an unusual diversity of species, including large numbers of predators and big fish, turtles, and the world’s third-largest dugong population. NASA image created by Jesse Allen, using Landsat data provided by the United States Geological Survey. Caption by Michon Scott. Instrument: Landsat 7 - ETM+ Credit: NASA/GSFC/Landsat NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Join us on Facebook

Stage-specific distribution models can predict eel (Anguilla anguilla) occurrence during settlement in coastal lagoons

NASA Astrophysics Data System (ADS)

Leone, C.; Zucchetta, M.; Capoccioni, F.; Gravina, M. F.; Franzoi, P.; Ciccotti, E.

2016-03-01

Eel (Anguilla anguilla) is a catadromous fish species typical of Mediterranean coastal lagoons, that currently suffers from several anthropogenic and natural impacts. These are thought to be the cause of a stock-wide decline that this panmictic species is facing, in inland and coastal waters of Europe and North Africa. The decline affects both adult phases and recruitment, i.e. glass eel arrival to coastal waters and their ascent to inland waters. Quantitative features of eel recruitment reflect a transoceanic global scale, but also depend on local environmental conditions, the latter also affecting settlement dynamics in transitional waters. There is only little information on the dynamics of these two processes in coastal lagoons, notwithstanding the paramount importance of both in sustaining local stocks abundance and their demographic structure for this typical but also economically important inhabitant of Mediterranean lagoons, habitats that constitute an important share of the eel distribution area. The present study aims, therefore, to clarify space and time dynamics of local scale recruitment and of settlement in a coastal lagoon in the Mediterranean area, also by setting up a specific methodological approach. For this purpose, data from field surveys in combination with Species Distribution Models (SDMs) have been used in order to relate distribution of eel juvenile stages to the environmental conditions within the lagoon. Specifically, models were calibrated to quantify the relationship between presence of juvenile eel and the main environmental drivers, with the aim of identifying potential habitats for eel settlement within the lagoon. Results gained by modelling suggest certain spatial and temporal colonization patterns for the juvenile eel in the Fogliano lagoon, a typical Mediterranean coastal lake. The modelling approach has therefore proved to be a useful tool for predicting habitats for eel recruitment at the local scale and settlement, because

Evaluation of some heavy metal loading in the Kpeshi lagoon, Ghana

NASA Astrophysics Data System (ADS)

Fianko, Joseph R.; Laar, Cynthia; Osei, Juilet; Anim, Alfred K.; Gibrilla, Abass; Adomako, Dickson

2013-03-01

A study was carried out on the Kpeshi lagoon to evaluate the relative contributions of some heavy metals (Na, k, Ca, K, Fe, Mn, Ni, Cr, Cd, Al, Pb) on the current state of the Kpeshi lagoon. The lagoon water was sampled along with some fish samples. Water pH, electrical conductivity and total dissolved salts were measured in situ whilst Na and K were measured using flame emission spectrometry. Heavy metals (iron, manganese, nickel, aluminium, chromium, lead and cadmium) in both water and fish samples were analyzed using atomic absorption spectrometry. Measured pH values ranged between 6.60 and 7.87, a mean conductivity and total dissolved salts of 87.31 ± 19.14 μS/cm and 38.4 ± 8.43 mg/L, respectively. Nutrient and organic matter were among the frequent source of pollution in the lagoon with mean sulphate, phosphate and nitrate concentrations of 190 ± 108.84, 1.62 ± 0.49 and 0.89 ± 0.26 mg/L, respectively. Iron and aluminium in the lagoon water measured the highest concentration of 13.2 ± 3.47 and 13.6 ± 4.29 mg/L, respectively. Fish samples however revealed very high concentrations of calcium and potassium measuring 15,709 ± 75.35 and 5,949.49 ± 87.30 mg/kg, respectively. Sodium and aluminium also revealed relatively high concentrations: 3,775.70 ± 24.80 and 708.47 ± 4.95 mg/kg, respectively. Notably, sites closer to settlement community (Teshie Township, e.g. S1, S2, S3 and S4) and the hospitality industries (i.e. dotted hotels, e.g. S7) appeared to be relatively more contaminated.

Influence of different organic fertilizers on quality parameters and the delta(15)N, delta(13)C, delta(2)H, delta(34)S, and delta(18)O values of orange fruit (Citrus sinensis L. Osbeck).

PubMed

Rapisarda, Paolo; Camin, Federica; Fabroni, Simona; Perini, Matteo; Torrisi, Biagio; Intrigliolo, Francesco

2010-03-24

To investigate the influence of different types of fertilizers on quality parameters, N-containing compounds, and the delta(15)N, delta(13)C, delta(2)H, delta (34)S, and delta(18)O values of citrus fruit, a study was performed on the orange fruit cv. 'Valencia late' (Citrus sinensis L. Osbeck), which was harvested in four plots (three organic and one conventional) located on the same farm. The results demonstrated that different types of organic fertilizers containing the same amount of nitrogen did not effect important changes in orange fruit quality parameters. The levels of total N and N-containing compounds such as synephrine in fruit juice were not statistically different among the different treatments. The delta(15)N values of orange fruit grown under fertilizer derived from animal origin as well as from vegetable compost were statistically higher than those grown with mineral fertilizer. Therefore, delta(15)N values can be used as an indicator of citrus fertilization management (organic or conventional), because even when applied organic fertilizers are of different origins, the natural abundance of (15)N in organic citrus fruit remains higher than in conventional ones. These treatments also did not effect differences in the delta(13)C, delta(2)H, delta(34)S, and delta(18)O values of fruit.

Monitoring the Spread of West Nile Virus with Satellite Data

NASA Technical Reports Server (NTRS)

2002-01-01

A NASA-funded study uses temperature and vegetation data from satellites to help track and predict where West Nile virus is spreading in North America. Scientists and public health officials hope one day to use near real-time maps to focus resources and stave off the disease more efficiently. This image is a composite of land surface temperatures (LST) recorded between 1997 and 2000 and was used to help monitor and predict the spread of West Nile virus in the United States. In the color figure above, the mean land surface temperatures are in red; annual amplitude-or the difference between low and high annual temperatures-is in blue; and annual phase-or the timing of annual temperature peaks-appears in green. Brighter colors mean higher values. The major north-south temperature difference (dull red in the upper part of the image to bright red in the lower part) is considerably affected by the Rockies in the west and to a much lesser extent by the Appalachians in the east. The brighter blue in the upper part of the image indicates the big difference between highest and lowest temperatures during the course of a year at higher latitudes. There is less variation in the timing of the annual peak of land surface temperatures, which occurs earlier in the south than in the north. Black dots superimposed on this image are the locations (county geo-centers) where birds infected with West Nile virus were reported between January and October 2001. Scientists working with the International Research Partnership for Infectious Diseases (INTREPID) program based at NASA are using such imagery to define and predict the conditions where mosquitoes transmit West Nile virus in the U.S. The conclusion reached about the importance of any single variable depends both upon its value and context. A temperature of 30o Celsius (86o Fahrenheit) might be fatal for a mosquito at low humidity but survivable at higher humidities. The work done here on West Nile virus and other diseases shows very

Long-term neurological outcomes in West Nile virus-infected patients: an observational study.

PubMed

Weatherhead, Jill E; Miller, Vicki E; Garcia, Melissa N; Hasbun, Rodrigo; Salazar, Lucrecia; Dimachkie, Mazen M; Murray, Kristy O

2015-05-01

The Houston West Nile Cohort (HWNC) was founded in 2002 when West Nile virus (WNV) reached Houston, TX. The long-term outcomes following WNV infection are still mostly unknown, though neurological abnormalities up to 1 year postinfection have been documented. We report an observational study of neurological abnormalities at 1-3 and 8-11 years following WNV infection in the HWNC. We conducted standard neurological examinations at two separate time points to assess changes in neurological status over time. The majority of patients (86%, 30/35) with encephalitis had abnormal neurological exam findings at the time of the first assessment compared with uncomplicated fever (27%, 3/11) and meningitis (36%, 5/14) cases. At the time of the second assessment, 57% (4/7) of West Nile fever (WNF), 33% (2/6) of West Nile meningitis (WNM), and 36% (5/14) of West Nile encephalitis (WNE) had developed new neurological complications. The most common abnormalities noted were tandem gait, hearing loss, abnormal reflexes, and muscle weakness. Long-term neurological abnormalities were most commonly found in patients who experienced primary WNV encephalitis. New abnormalities may develop over time regardless of initial clinical infection. Future studies should aim to differentiate neurological consequences due to WNV neuroinvasive infection versus neurological decline related to comorbid conditions. © The American Society of Tropical Medicine and Hygiene.

Tidal dynamics of the Terminos Lagoon, Mexico: observations and 3D numerical modelling

NASA Astrophysics Data System (ADS)

Contreras Ruiz Esparza, Adolfo; Douillet, Pascal; Zavala-Hidalgo, Jorge

2014-09-01

The tidal circulation patterns in the Terminos Lagoon were studied based on the analysis of 1 year of measurements and numerical simulations using a baroclinic 3D hydrodynamic model, the MARS3D. A gauging network was installed consisting of six self-recording pressure-temperature sensors, a tide gauge station and two current profilers, with pressure and temperature sensors moored in the main lagoon inlets. Model simulations were validated against current and sea level observations and were used to analyse the circulation patterns caused by the tidal forcing. The numerical model was forced with eight harmonic components, four diurnal ( K 1, O 1, P 1, Q 1) and four semi-diurnal ( M 2, S 2, N 2, K 2), extracted from the TPX0.7 database. The tidal patterns in the study area vary from mixed, mainly diurnal in the two main inlets of the lagoon, to diurnal in its interior. The tidal residual circulation inside the lagoon is dominated by a cyclonic gyre. The results indicate a net flux from the southwest Ciudad del Carmen inlet (CdC) towards the northeast Puerto Real inlet (PtR) along the southern side of the lagoon and the opposite in the northern side. The results indicate two areas of strong currents in the vicinity of the inlets and weak currents inside the lagoon. The area of strong currents in the vicinity of the CdC inlet is larger than that observed in the PtR inlet. Nevertheless, the current analysis indicates that the highest current speeds, which can reach a magnitude of 1.9 m s-1, occurred in PtR. A further analysis of the tide distortion in the inlets revealed that both passages are ebb dominated.

Biotic variation in coastal water bodies in Sussex, England: Implications for saline lagoons

NASA Astrophysics Data System (ADS)

Joyce, Chris B.; Vina-Herbon, Cristina; Metcalfe, Daniel J.

2005-12-01

Coastal water bodies are a heterogeneous resource typified by high spatial and temporal variability and threatened by anthropogenic impacts. This includes saline lagoons, which support a specialist biota and are a priority habitat for nature conservation. This paper describes the biotic variation in coastal water bodies in Sussex, England, in order to characterise the distinctiveness of the saline lagoon community and elucidate environmental factors that determine its distribution. Twenty-eight coastal water bodies were surveyed for their aquatic flora and invertebrate fauna and a suite of exploratory environmental variables compiled. Ordination and cluster analyses were used to examine patterns in community composition and relate these to environmental parameters. Biotic variation in the coastal water body resource was high. Salinity was the main environmental parameter explaining the regional distribution of taxa; freshwater and saline assemblages were evident and related to sea water ingress. Freshwater sites were indicated by the plant Myriophyllum spicatum and gastropod mollusc Lymnaea peregra, while more saline communities supported marine and brackish water taxa, notably a range of chlorophytic algae and the bivalve mollusc Cerastoderma glaucum. Site community differences were also related to bank slope and parameters describing habitat heterogeneity. A saline lagoon community was discerned within the matrix of biotic variation consisting of specialist lagoonal species with associated typically euryhaline taxa. For fauna, the latter were the molluscs Abra tenuis and Hydrobia ulvae, and the crustaceans Corophium volutator and Palaemonetes varians, and for flora they were the algae Ulva lactuca, Chaetomorpha mediterranea, Cladophora spp. and Enteromorpha intestinalis. One non-native polychaete species, Ficopomatus enigmaticus, also strongly influenced community structure within the lagoonal resource. The community was not well defined as specialist and

A review of the effects of agricultural and industrial contamination on the Ebro delta biota and wildlife.

PubMed

Mañosa, S; Mateo, R; Guitart, R

2001-10-01

The Ebro delta (NE Spain) is a 320 km2 wetland area of international importance for conservation. The area is devoted to rice farming and receives large amounts of pesticides. Industrial pollutants are also carried to the delta by the river. The information accumulated during the last 25 year on the effect of such pollution on the biota is reviewed in order to identify the existing gaps and needs for management. Organochlorine pesticides were legally used until 1977, which has resulted in the widespread presence of these compounds in the Ebro delta biota. Lethal, sublethal or other detrimental effects of these pesticides on wildlife in the area were poorly investigated, but negative effects on the reproduction of ducks and herons were reported. Nowadays, polychlorinated biphenyls (PCBs) are the main responsible of organochlorine pollution in the area: concentrations in biota samples are higher than levels observed in nearby coastal areas, as a result of the significant PCB inputs by the river which, in 1990, were evaluated at 126 kg yr(-1). The massive use of herbicides is thought to have contributed to the elimation of macrophyte vegetation in the lagoons during the eighties, which had strong consequences on diving ducks and coot populations. Weed control is also related to the loss of biodiversity held by rice fields. The massive and inadequate use of organophosphorus and carbamate pesticides (involving more than 20,000 t yr(-1) has produced some waterbird mortality events, and may have direct and indirect effects on other non-target organisms. The accumulation in the soil of lead pellets used in waterfowl shooting is estimated to kill some 16,300 waterbirds in the Ebro delta every year.

Organic matter composition in the sediment of three Brazilian coastal lagoons: district of Macaé, Rio de Janeiro (Brazil).

PubMed

Zink, Klaus-Gerhard; Furtado, André L S; Casper, Peter; Schwark, Lorenz

2004-03-01

Freshwater lagoons comprise important coastal ecosystems and natural buffers between urbanized land areas and open ocean in the Rio de Janeiro State, Brazil. Studies of sediment and water chemistry, zooplankton and bacterial communities to assess the extent of anthropogenic disturbance are available. Here we contribute with an organic-geochemical approach supplemented by some microbiological aspects to complete the characterization of these lagoonal ecosystems. Bulk organic matter and extractable lipids (aliphatic hydrocarbons, alcohols and fatty acids, sterols) were investigated from two locations per lagoon: at the seaward site and landward ends - and at two depth intervals (0-3 and 3-6 cm) per site. Urbanized Imboacica Lagoon received increased anthropogenic input over the most recent years represented by the topmost 3 cm of sediment, whereas deeper sediment layers are less affected by human influence. Eutrophication or nutrient availability favored enhanced algal/cyanobacterial growth. In remote Cabiúnas and Comprida Lagoons pristine conditions are preserved. Organic matter from vascular plants dominates (chain length of free lipids up to C36), which is exceptionally well preserved by acidic lagoonal waters. Differentiation between landward and seaward sites in these two lagoons is less well established due to much smaller surface/volume to catchment ratios. No anthropogenic influences are yet detectable in sediments of Cabiúnas and Comprida Lagoons.

Effects of regional climate changes on the planktonic ecosystem and water environment in the frozen Notoro Lagoon, northern Japan.

PubMed

Katsuki, Kota; Seto, Koji; Noguchi, Takuro; Sonoda, Takeshi; Kim, JuYong

2012-10-01

Diatom fossils from core sediments and living diatoms from water samples of Notoro Lagoon in northern Japan were examined to evaluate natural climate effects on lagoon environmental changes. In 1974, the artificial inlet was excavated. Immediately after, the anoxic bottom water in Notoro Lagoon began to disappear due to an increasing water exchange rate. However, chemical oxygen demand (COD) in the bottom water of Notoro Lagoon gradually increased, with fluctuations, during the last 30 years. In addition, the dominant diatom assemblages in Notoro Lagoon shifted to ice-related and spring bloom taxa after the excavation. The dominant taxa of each year in the sediment core were also strongly related to the timing of lagoon ice melting. This is because the COD in Notoro Lagoon was affected by the deposited volume of blooming diatoms, which was controlled by the duration of ice cover and the timing of ice discharge to the Okhotsk Sea likely due to an air pressure pattern change over the northern North Pacific like the Pacific Decadal Oscillation (PDO). Copyright © 2012 Elsevier Ltd. All rights reserved.

Distribution and sources of carbon, nitrogen, phosphorus and biogenic silica in the sediments of Chilika lagoon

NASA Astrophysics Data System (ADS)

Nazneen, Sadaf; Raju, N. Janardhana

2017-02-01

The present study investigated the spatial and vertical distribution of organic carbon (OC), total nitrogen (TN), total phosphorus (TP) and biogenic silica (BSi) in the sedimentary environments of Asia's largest brackish water lagoon. Surface and core sediments were collected from various locations of the Chilika lagoon and were analysed for grain-size distribution and major elements in order to understand their distribution and sources. Sand is the dominant fraction followed by silt + clay. Primary production within the lagoon, terrestrial input from river discharge and anthropogenic activities in the vicinity of the lagoon control the distribution of OC, TN, TP and BSi in the surface as well as in the core sediments. Low C/N ratios in the surface sediments (3.49-3.41) and cores (4-11.86) suggest that phytoplankton and macroalgae may be major contributors of organic matter (OM) in the lagoon. BSi is mainly associated with the mud fraction. Core C5 from Balugaon region shows the highest concentration of OC ranging from 0.58-2.34%, especially in the upper 30 cm, due to direct discharge of large amounts of untreated sewage into the lagoon. The study highlights that Chilika is a dynamic ecosystem with a large contribution of OM by autochthonous sources with some input from anthropogenic sources as well.

Lacaziosis in bottlenose dolphins (Tursiops truncatus) in the Indian River Lagoon, Florida, USA.

PubMed

Durden, Wendy Noke; St Leger, Judy; Stolen, Megan; Mazza, Teresa; Londono, Catalina

2009-07-01

The objective of this study was to document the presence of the fungal granulomatous skin disease lacaziosis in stranded Indian River Lagoon (IRL) bottlenose dolphins (Tursiops truncatus). From 1 January 2007 through 31 December 2007, stranded dolphins from the northern part of the IRL were thoroughly examined, and appropriate tissue samples were collected. The intralesional fungal agent (Lacazia loboi) was identified histologically in three bottlenose dolphins. Histologically, lacaziosis has been previously documented in IRL dolphins inhabiting the southern portion of the lagoon. Our findings suggest that the disease occurs throughout the lagoon. Enhanced monitoring of the prevalence of lacaziosis in dolphins throughout the IRL is needed to assess changes in population health.

Mitogenomes from Egyptian Cattle Breeds: New Clues on the Origin of Haplogroup Q and the Early Spread of Bos taurus from the Near East.

PubMed

Olivieri, Anna; Gandini, Francesca; Achilli, Alessandro; Fichera, Alessandro; Rizzi, Ermanno; Bonfiglio, Silvia; Battaglia, Vincenza; Brandini, Stefania; De Gaetano, Anna; El-Beltagi, Ahmed; Lancioni, Hovirag; Agha, Saif; Semino, Ornella; Ferretti, Luca; Torroni, Antonio

2015-01-01

Genetic studies support the scenario that Bos taurus domestication occurred in the Near East during the Neolithic transition about 10 thousand years (ky) ago, with the likely exception of a minor secondary event in Italy. However, despite the proven effectiveness of whole mitochondrial genome data in providing valuable information concerning the origin of taurine cattle, until now no population surveys have been carried out at the level of mitogenomes in local breeds from the Near East or surrounding areas. Egypt is in close geographic and cultural proximity to the Near East, in particular the Nile Delta region, and was one of the first neighboring areas to adopt the Neolithic package. Thus, a survey of mitogenome variation of autochthonous taurine breeds from the Nile Delta region might provide new insights on the early spread of cattle rearing outside the Near East. Using Illumina high-throughput sequencing we characterized the mitogenomes from two cattle breeds, Menofi (N = 17) and Domiaty (N = 14), from the Nile Delta region. Phylogenetic and Bayesian analyses were subsequently performed. Phylogenetic analyses of the 31 mitogenomes confirmed the prevalence of haplogroup T1, similar to most African cattle breeds, but showed also high frequencies for haplogroups T2, T3 and Q1, and an extremely high haplotype diversity, while Bayesian skyline plots pointed to a main episode of population growth ~12.5 ky ago. Comparisons of Nile Delta mitogenomes with those from other geographic areas revealed that (i) most Egyptian mtDNAs are probably direct local derivatives from the founder domestic herds which first arrived from the Near East and the extent of gene flow from and towards the Nile Delta region was limited after the initial founding event(s); (ii) haplogroup Q1 was among these founders, thus proving that it underwent domestication in the Near East together with the founders of the T clades.

The Defense Committees of Sleepy Lagoon: A Convergent Struggle against Fascism, 1942-1944

ERIC Educational Resources Information Center

Barajas, Frank P.

2006-01-01

The Sleepy Lagoon Defense Committee originated as an ad hoc committee and evolved to a broad-based movement for legal justice on behalf of seventeen youth convicted of murder and assault charges in connection with the Sleepy Lagoon case in Los Angeles in January 1943. This essay chronicles the multidimensional organizing to shift public opinion in…

A new sampler for stratified lagoon chemical and microbiological assessments.

PubMed

McLaughlin, M R; Brooks, J P; Adeli, A

2014-07-01

A sampler was needed for a spatial and temporal study of microbial and chemical stratification in a large swine manure lagoon that was known to contain zoonotic bacteria. Conventional samplers were limited to collections of surface water samples near the bank or required a manned boat. A new sampler was developed to allow simultaneous collection of multiple samples at different depths, up to 2.3 m, without a manned boat. The sampler was tethered for stability, used remote control (RC) for sample collection, and accommodated rapid replacement of sterile tubing modules and sample containers. The sampler comprised a PVC pontoon with acrylic deck and watertight enclosures, for a 12 VDC gearmotor, to operate the collection module, and vacuum system, to draw samples into reusable autoclavable tubing and 250-mL bottles. Although designed primarily for water samples, the sampler was easily modified to collect sludge. The sampler held a stable position during deployment, created minimal disturbance in the water column, and was readily cleaned and sanitized for transport. The sampler was field tested initially in a shallow fresh water lake and subsequently in a swine manure treatment lagoon. Analyses of water samples from the lagoon tests showed that chemical and bacterial levels, pH, and EC did not differ between 0.04, 0.47, and 1.0 m depths, but some chemical and bacterial levels differed between winter and spring collections. These results demonstrated the utility of the sampler and suggested that future manure lagoon studies employ fewer or different depths and more sampling dates.

Water hyacinths for upgrading sewage lagoons to meet advanced wastewater treatment standards, part 2

NASA Technical Reports Server (NTRS)

Wolverton, B. C.; Mcdonald, R. C.

1976-01-01

Field tests using water hyacinths as biological filtration agents were conducted in the Mississippi gulf coast region. The plants were installed in one single cell and one multiple cell sewage lagoon systems. Water hyacinths demonstrated the ability to maintain BOD5 and total suspended solid (TSS) levels within the Environmental Protection Agency's prescribed limits of 30 mg/lBOD5 and 30 mg/l TSS. A multiple cell sewage lagoon system consisting of two aerated and one water hyacinth covered cell connected in series demonstrated the ability to maintain BOD5 and TSS levels below 30 mg/l year-round. A water hyacinth covered lagoon with a surface area of 0.28 hectare containing a total volume of 6.8 million liters demonstrated the capacity to treat 437,000 to 1,893,000 liters of sewage influent from 2.65 hectares of aerated lagoons daily and produce an effluent that met or exceeded standards year-round.

Post-breeding distribution of Long-tailed Ducks Clangula hyemalis from the Yukon-Kuskokwim Delta, Alaska

USGS Publications Warehouse

Petersen, M.R.; McCaffery, B.J.; Flint, Paul L.

2003-01-01

Breeding populations of Long-tailed Ducks Clangula hyemalis have declined in western Alaska, particularly on the Yukon-Kuskokwim (Y-K) Delta, and the species is currently considered a species of particular concern by the U.S. Fish & Wildlife Service in Alaska. Potential factors that may have contributed to this decline that occurred away from the breeding grounds could not be considered since moulting and wintering areas for this population were unknown. A study was conducted in 1998 and 1999 to locate the moulting and wintering areas of the Y-K Delta breeding population. VHF and satellite transmitters were deployed to identify areas used by moulting birds. Based on the locations identified by satellite telemetry, aerial surveys were flown to locate birds marked with VHF transmitters, then low-level aerial surveys were designed and conducted to determine the number of birds using these and adjacent areas. Moulting locations of 54 marked female Long-tailed Ducks were identified: 13 marked females were found in wetlands and large lakes on the Y-K Delta, 11 in coastal lagoons at St Lawrence Island, Alaska, and two along the coast of the Chukotka Peninsula, Russia. A autumn staging area was identified along the east coast of the Chukotka Peninsula which was used by seven of 10 birds with satellite transmitters providing locations during that period. Birds wintered in coastal waters of the North Pacific Ocean north of 50??N and between 150??E and 130??W. The wide distribution of birds in winter suggests little probability of a single factor in winter contributing to the decline.

Calibration of Linked Hydrodynamic and Water Quality Model for Santa Margarita Lagoon

DTIC Science & Technology

2016-07-01

was used to drive the transport and water quality kinetics for the simulation of 2007–2009. The sand berm, which controlled the opening/closure of...TECHNICAL REPORT 3015 July 2016 Calibration of Linked Hydrodynamic and Water Quality Model for Santa Margarita Lagoon Final Report Pei...Linked Hydrodynamic and Water Quality Model for Santa Margarita Lagoon Final Report Pei-Fang Wang Chuck Katz Ripan Barua SSC Pacific James

Characterization of a Mud Deposit Offshore of the Patos Lagoon, Southern Brazil

DTIC Science & Technology

2009-02-01

Journal Article 3. DATES COVERED (From - To) 4. TITLE AND SUBTITLE Characterization of mud deposit offshore of the Patos lagoon, southern Brazil 5a...deposition of mud on the beach along the shoreface of Rio Grande do Sul, Brazil dramatically influences the normal operations in the littoral zone...Continental Shelf Research journal homepage: www.elsevier.com/locate/csr Characterization of a mud deposit offshore of the Patos Lagoon, southern Brazil

Growth, Survival and Reproduction of the Giant Clam Tridacna maxima (Röding 1798, Bivalvia) in Two Contrasting Lagoons in French Polynesia

PubMed Central

Van Wynsberge, Simon; Andréfouët, Serge; Gaertner-Mazouni, Nabila; Wabnitz, Colette C. C.; Menoud, Mathilde; Le Moullac, Gilles; Levy, Peva; Gilbert, Antoine; Remoissenet, Georges

2017-01-01

Shell growth, reproduction, and natural mortality of the giant clam Tridacna maxima were characterized over a two-year-period in the lagoon of the high island of Tubuai (Austral Archipelago) and in the semi-closed lagoon of Tatakoto (Tuamotu Archipelago) in French Polynesia. We also recorded temperature, water level, tidal slope, tidal range, and mean wave height in both lagoons. Lower lagoon aperture and exposure to oceanic swells at Tatakoto than at Tubuai was responsible for lower lagoon water renewal, as well as higher variability in temperature and water level at Tatakoto across the studied period. These different environmental conditions had an impact on giant clams. Firstly, spawning events in the lagoon of Tatakoto, detected by gonad maturity indices in June and July 2014, were timed with high oceanic water inflow and a decrease in lagoon water temperature. Secondly, temperature explained differences in shell growth rates between seasons and lagoons, generating different growth curves for the two sites. Thirdly, local mortality rates were also found to likely be related to water renewal patterns. In conclusion, our study suggests that reef aperture and lagoon water renewal rates play an integral role in giant clam life history, with significant differences in rates of shell growth, mortality and fertility found between open versus semi-closed atoll lagoons in coral reef ecosystems. PMID:28118406

Mud deposit formation on the open coast of the larger Patos Lagoon-Cassino Beach system

NASA Astrophysics Data System (ADS)

Vinzon, S. B.; Winterwerp, J. C.; Nogueira, R.; de Boer, G. J.

2009-03-01

This paper proposes an explanation of the mud deposits on the inner Shelf of Cassino Beach, South Brazil, by using computational modeling. These mud deposits are mainly formed by sediments delivered from Patos Lagoon, a coastal lagoon connected to the Shelf, next to Cassino Beach. The deposits are characterized by (soft) mud layers of about 1 m thick and are found between the -5 and -20 isobaths. Two hydrodynamic models of the larger Patos Lagoon-Cassino Beach system were calibrated against water elevation measured for a 5 months period, and against currents and salinity measured for a week period. The circulation patterns and water exchange through the mouth were analyzed as a function of local and remote wind effects, and river discharges. The remote wind effect mainly governs the quantity of water exchange with the Lagoon through its effect on mean sea level as a result of Ekman dynamics, while river discharges are important for the salinity of the exchanged water masses. Local winds augment the export-import rates by set-up and set-down within the Lagoon, but their effects are much smaller than those of the remote wind. Currents patterns on the inner Shelf during water outflow revealed a recirculation zone south of the Lagoon, induced by the local geometry and bathymetry of the system. This recirculation zone coincides with observed locations of mud deposition. Water, hence suspended sediment export occurs when remote and local winds are from the N-E, which explains why fine sediment deposits are mainly found south of the Lagoon's breakwater. A sensitivity analysis with the numerical model quantified the contribution of the various mechanisms driving the transport and fate of the fine suspended sediments, i.e. the effects of remote and local wind, of the astronomical tide, of river discharge and fresh-salt water-induced density currents, and of earth rotation. It is concluded that gravitational circulation and earth rotation affects the further dispersion of

Hydrologic characteristics of lagoons at San Juan, Puerto Rico, during an October 1974 tidal cycle

USGS Publications Warehouse

Gómez-Gómez, Fernando; Ellis, S.R.

1983-01-01

Flow and water-quality changes were studied during a period of intense rainfall in the San Juan Lagoon system. The study covered a 25-hour period beginning 0900 hours 22 October, 1974. Precipitation during the study period averaged 70 millimeters. Sampling stations were located at Boca de Cangrejos, the main ocean outlet; Canal Pinones between Laguna de Pinones and Laguna La Torrecilla; Canal Suarez between Laguna San Jose, connects to Laguna La Torrecilla; and Cano de Martin Pena between Laguna San Jose and Bahia de San Juan. In addition water-elevation recording gages were installed at each lagoon. Water samples from the canal stations were analyzed for organic carbon, nitrogen and phosphorus species, and suspended sediment. Specific-conductance measurements were used with the chemical data to estimate the runoff contributions of nutrients. Runoff into the lagoon, system during the study period was about 2.8 million cubic meters, or about 70 percent of the average precipitation. The runoff contributed chemical loadings to the lagoons of 95,000 kilograms total-organic carbon; 2,700 kilograms of total phosphorus; and 10,000 kilograms of total Khjeldhal nitrogen. A comparison with a prior study during which there was no significant rain, show that dry-period loadings are less than 10 percent of the wet-period loadings. At the end of the study period the system had not reached equilibrium, and the lagoons retained 80 percent of the water inflows from 50 to 90 percent of the chemical loads. Nearly 95 percent of the water outflows occurred at the Boca de Cangrejos sea outlet. The three lagoons and interconnecting canals form a very complex hydraulic system that is difficult to study using traditional techniques. A model of the system will facilitate management to improve the quality of water in the lagoons.

77 FR 62260 - Niles America Wintech, Inc., Warehousing Division, a Valeo Company, Including On-Site Leased...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-12

..., Adecco Employment Services, Winchester, KY; Niles America Wintech, Inc., Assembly and Testing Division, a... former workers of Niles America Wintech, Inc., Warehousing Division and Assembly and Testing Division...

Hydrological behavior of coastal lagoons associated to wetlands, an example from southernmost bahía Samborombón (Argentina).

NASA Astrophysics Data System (ADS)

Tejada Tejada, Macarena; Carol, Eleanora; Galliari, Julieta; Richiano, Sebastian

2017-04-01

Coastal wetlands are located at a critical interface between the terrestrial and marine environments and are ideally positioned to reduce impacts from land-based sources. At the southern region of Bahía Samborombón (Argentina) the wetlands includes several small coastal lagoons developed inside of a sandy spike. The main object of this work is to analyze the hydrological behavior of the lagoons evaluating their role in the maintenances of the wetland. In order to do this, satellite image analysis was performed to identify the marshy areas, drainage features, morphology and connections of the lagoons, both with the tidal flows from the Río de la Plata estuary and from the Argentine Sea. Field surveys were carried out in one of the lagoons to define their geological and geomorphological characteristics. After that, a monitoring network was designed for sampling the superficial and the underground water, additionally electrical conductivity and pH of the water were determined in situ. In all the water samples extracted the content of majority ions was determined by standard methods. Complementary, sedimentological and malacological aspects were observed at several stations in the lagoon. The obtained results allow us to recognize that the tidal flow that enters from the sea, at least in the studied lagoon, is the main hydrological sustenance of the wetland. This flow enters mainly using one tidal channel which connects (in a semi-permanent way) the sea with the lagoon during extraordinary tide and storm events. During low tide the lagoon loses connection and the drainage towards the sea is scarce. The tidal water that accumulates in the lagoon is subsequently evaporated causing an increase in the salinity of the surface water to values higher than the sea. Groundwater that accumulates through the infiltration of rainfall in the sandy sediments of the spike also discharges to the lagoon and supports the wetland surrounding the coastal lagoon. This flow, even when it

Microcystins Presence in Mussels (M. galloprovincialis) and Water of Two Productive Mediterranean's Lagoons (Sardinia, Italy)

PubMed Central

Baralla, Elena; Varoni, Maria Vittoria; Sedda, Tiziana; Floris, Antonello; Demontis, Maria Piera

2017-01-01

Microcystins (MCs) are hepatotoxins harmful for animal and human health. The most toxic type between them is MC-LR whose presence has been investigated in different reservoirs all around the world. In this work microcystins were monitored in spring and summer in water and mussels (Mytilus galloprovincialis) of two Sardinia lagoons: Cabras and Calich lagoons. A Solid Phase Extraction method was developed to clean and concentrate samples before the Enzyme Linked Immunosorbent Assay (ELISA) and the following Mass Spectrometry detection. MCs presence was detected using the screening ELISA test in both lagoons. MCs peak was revealed in July for water and mussels belonging to Cabras lagoon (0.75 ± 0.07 ng/L in water and 0.12 ± 0.04 ng/g ww in mussels). In water of Calich lagoon there was a constant trend in the concentration of MCs during the considered months, while there was a MCs peak in July (0.6 ± 0.5 ng/g ww) in mussels. The following LC-MS/MS analysis did not reveal MC-LR presence in all analyzed samples. These results can be useful to enrich knowledge on public health and consumer's safeguard. PMID:29359150

Epidemiological and clinical aspects on West Nile virus, a globally emerging pathogen.

PubMed

David, Shoba; Abraham, Asha Mary

2016-08-01

Since the isolation of West Nile virus (WNV) in 1937, in Uganda, it has spread globally, causing significant morbidity and mortality. While birds serve as amplifier hosts, mosquitoes of the Culex genus function as vectors. Humans and horses are dead end hosts. The clinical manifestations of West Nile infection in humans range from asymptomatic illness to West Nile encephalitis. The laboratory offers an array of tests, the preferred method being detection of RNA and serum IgM for WNV, which, if detected, confirms the clinical diagnosis. Although no definitive antiviral therapy and vaccine are available for humans, many approaches are being studied. This article will review the current literature of the natural cycle, geographical distribution, virology, replication cycle, molecular epidemiology, pathogenesis, laboratory diagnosis, clinical manifestations, blood donor screening for WNV, treatment, prevention and vaccines.

Growth laws for sub-delta crevasses in the Mississippi River Delta

NASA Astrophysics Data System (ADS)

Yocum, T. A.; Georgiou, I. Y.; Straub, K. M.

2017-12-01

River deltas are threatened by environmental change, including subsidence, global sea level rise, reduced sediment inputs and other local factors. In the Mississippi River Delta (MRD) these impacts are exemplified, and have led to proposed solutions to build land that include sediment diversions to reinitiate the delta cycle. Deltas were studied extensively using numerical models, theoretical and conceptual frameworks, empirical scaling relationships, laboratory models and field observations. But predicting the future of deltas relies on field observations where for most deltas data are still lacking. Moreover, empirical and theoretical scaling laws may be influenced by the data used to develop them, while laboratory deltas may be influenced by scaling issues. Anthropogenic crevasses in the MRD are large enough to overcome limitations of laboratory deltas, and small enough to allow for rapid channel and wetland development, providing an ideal setting to investigate delta development mechanics. Here we assessed growth laws of sub-delta crevasses (SDC) in the MRD, in two experimental laboratory deltas (LD - weakly and strongly cohesive) and compared them to river dominated deltas worldwide. Channel and delta geometry metrics for each system were obtained using geospatial tools, bathymetric datasets, sediment size, and hydrodynamic observations. Results show that SDC follow growth laws similar to large river dominated deltas, with the exception of some that exhibit anomalous behavior with respect to the frequency and distance to a bifurcation and the fraction of wetted delta shoreline (allometry metrics). Most SDC exhibit a systematic decrease of non-dimensional channel geometries with increased bifurcation order, indicating that channels are adjusting to decreased flow after bifurcations occur, and exhibit linear trends for land allometry and width-depth ratio, although geometries decrease more rapidly per bifurcation order. Measured distance to bifurcations in SDC

Water-Quality Monitoring and Biological Integrity Assessment in the Indian River Lagoon, Florida: Status, Trends, and Loadings (1988-1994).

PubMed

Sigua; Steward; Tweedale

2000-02-01

/ The Indian River Lagoon (IRL) system that extends from Ponce DeLeon Inlet to Jupiter Inlet is comprised of three interconnected estuarine lagoons: the Mosquito Lagoon (ML), the Banana River Lagoon (BRL), and the Indian River Lagoon (subdivided into North Indian River Lagoon, NIRL and the South Indian River Lagoon, SIRL). The declines in both the areal coverage and species diversity of seagrass communities within the IRL system are believed to be due in part to continued degradation of water quality. Large inflows of phosphorus (P) and nitrogen (N) -laden storm-water from urban areas and agricultural land have been correlated with higher chlorophyll a production in the central, south central, and the south segments of the lagoon. In a system as large and complex as the lagoon, N and P limitations are potentially subject to significant spatial and temporal variability. Total Kjeldahl nitrogen (TN) was higher in the north (1.25 mg/liter) and lower in the south (0.89 mg/liter). The reverse pattern was observed for total P (TP), i.e., lowest in the north (0.03 mg/liter) and highest at the south (0.14 mg/liter) ends of the IRL. This increased P concentration in the SIRL appears to have a significantly large effect on chlorophyll a production compared with the other segments, as indicated by stepwise regression statistics. This relationship can be expressed as follows: South IRL [chlorophyll a] = -8.52 + 162.41 [orthophosphate] + 7.86 [total nitrogen] + 0.38 [turbidity]; R(2) = 0.98**.

Tracing organic matter sources in a tropical lagoon of the Caribbean Sea

NASA Astrophysics Data System (ADS)

Alonso-Hernández, Carlos M.; Garcia-Moya, Alejandro; Tolosa, Imma; Diaz-Asencio, Misael; Corcho-Alvarado, Jose Antonio; Morera-Gomez, Yasser; Fanelli, Emanuela

2017-09-01

The natural protected lagoon of Guanaroca, located between Cienfuegos Bay and the Arimao River, Cuba, has been heavily impacted by human-induced environmental changes over the past century. Sources of organic matter in the Guanaroca lagoon and concentrations of radioisotopes (210Pb, 226Ra, 137Cs and 239,240Pu), as tracers of anthropogenic impacts, were investigated in a 78 cm sediment core. Variations in total organic carbon (TOC), total nitrogen (TN), stable isotopic composition (δ13C and δ15N) and ratio of total organic carbon to total nitrogen (C/N) were analysed. On such a basis, environmental changes in the lagoon were revealed. Down core variation patterns of the parameters representing sources of organic matter were predominantly related to the impacts of human activities. Up to the nineteenth century, the principal sources of organic matter to sediments (more than 80%) were a mixing of terrestrial vascular plants ( 48%) and freshwater phytoplankton ( 8%), with minimal contribution from the marine component ( 16%). In the period 1900-1980, due to the strong influence of human activities in the catchment area, the water exchange capacity of the lagoon declined substantially, as indicated by the relatively high proportion of organic matter originated from human activities (58%). Since 1980, as a result of management actions in the protected area, the lagoon has regained gradually its capability to exchange freshwater, showing sources of organic matter similar to the natural conditions recorded previous to 1900, although an indication of human impact (treated sewage contributed for 26% to the organic matter in sediments) was still observed and further management measures would be required.

Occurrence of West Nile virus antibodies in wild birds, horses, and humans in Poland.

PubMed

Niczyporuk, Jowita Samanta; Samorek-Salamonowicz, Elżbieta; Lecollinet, Sylvie; Pancewicz, Sławomir Andrzej; Kozdruń, Wojciech; Czekaj, Hanna

2015-01-01

Serum samples of 474 wild birds, 378 horses, and 42 humans with meningitis and lymphocytic meningitis were collected between 2010 and 2014 from different areas of Poland. West Nile virus (WNV) antibodies were detected using competition enzyme linked immunosorbent assays: ELISA-1 ID Screen West Nile Competition, IDvet, ELISA-2 ID Screen West Nile IgM Capture, and ELISA-3 Ingezim West Nile Compac. The antibodies were found in 63 (13.29%) out of 474 wild bird serum samples and in one (0.26%) out of 378 horse serum samples. Fourteen (33.33%) out of 42 sera from patients were positive against WNV antigen and one serum was doubtful. Positive samples obtained in birds were next retested with virus microneutralisation test to confirm positive results and cross-reactions with other antigens of the Japanese encephalitis complex. We suspect that positive serological results in humans, birds, and horses indicate that WNV can be somehow closely related with the ecosystem in Poland.

Occurrence of West Nile Virus Antibodies in Wild Birds, Horses, and Humans in Poland

PubMed Central

Niczyporuk, Jowita Samanta; Samorek-Salamonowicz, Elżbieta; Lecollinet, Sylvie; Pancewicz, Sławomir Andrzej; Kozdruń, Wojciech; Czekaj, Hanna

2015-01-01

Serum samples of 474 wild birds, 378 horses, and 42 humans with meningitis and lymphocytic meningitis were collected between 2010 and 2014 from different areas of Poland. West Nile virus (WNV) antibodies were detected using competition enzyme linked immunosorbent assays: ELISA-1 ID Screen West Nile Competition, IDvet, ELISA-2 ID Screen West Nile IgM Capture, and ELISA-3 Ingezim West Nile Compac. The antibodies were found in 63 (13.29%) out of 474 wild bird serum samples and in one (0.26%) out of 378 horse serum samples. Fourteen (33.33%) out of 42 sera from patients were positive against WNV antigen and one serum was doubtful. Positive samples obtained in birds were next retested with virus microneutralisation test to confirm positive results and cross-reactions with other antigens of the Japanese encephalitis complex. We suspect that positive serological results in humans, birds, and horses indicate that WNV can be somehow closely related with the ecosystem in Poland. PMID:25866767

Developing a Truly Global Delta Database to Assess Delta Morphology and Morphodynamics

NASA Astrophysics Data System (ADS)

Caldwell, R. L.; Edmonds, D. A.; Baumgardner, S. E.; Whaling, A.

2015-12-01

Delta morphology reflects the interplay of various environmental parameters, though these relationships have only been tested on small datasets with 30-50 deltas. These datasets are biased toward the largest deltas, which typically have compound morphologies, form on passive margins, and may not be representative of the full breadth in delta morphology. With the goal of building more robust predictions of delta morphology to enhance hazard mitigation and resiliency planning, we have developed a truly global delta database including every delta on the world's marine coastlines. Using Google Earth imagery, we first identified all fluvial river mouths (≥ 50 m wide) connected to an upstream catchment. Deltas are defined geomorphically as river mouths that split into two or more active or relict distributary channels, end in a depositional protrusion from the shoreline, or do both. In our database we identified 5,801 river mouths, and 1,426 of those coastal rivers (~25%) have a geomorphic delta. ~75% of deltas exhibit an active or relict distributary network, while the remaining ~25% are single channel deltas with a basinward protrusion. Preliminary morphometric analysis (ratio of shore-parallel width, W, to shore-perpendicular length, L) on a subset of 159 deltas suggests W:L values range from 0.52 (elongate) to 23.6 (broad/cuspate). The median W:L value is 2.68, suggesting the majority of deltas are roughly semi-circular (W:L = 2), and the distribution is heavily skewed to the broad/cuspate deltas (~28% are >4 times wider than they are long). Preliminary comparison to downstream significant wave height data shows that the 'wider' deltas relate to higher wave heights (R2 = 0.42), though the data are scattered. Ultimately, the database will include additional measured morphometrics, including number of channel mouths and delta area, and morphodynamic data derived from serial Landsat imagery.

Assessing pollution in a Mediterranean lagoon using acid volatile sulfides and estimations of simultaneously extracted metals.

PubMed

Zaaboub, Noureddine; Helali, Mohamed Amine; Martins, Maria Virgínia Alves; Ennouri, Rym; Béjaoui, Béchir; da Silva, Eduardo Ferreira; El Bour, Monia; Aleya, Lotfi

2016-11-01

Bizerte Lagoon is a southern Mediterranean semi-enclosed lagoon with a maximum depth of 12 m. After assessing sediment quality, the authors report on the physicochemical characteristics of the lagoon's surface sediment using SEM (simultaneously extracted metals) and AVS (acid volatile sulfides) as proxies. Biogeochemical tools are used to investigate the environmental disturbance at the water-sediment interface by means of SEM and AVS to seek conclusions concerning the study area's pollution status. Results confirm accumulation of trace elements in sediment. The use of the SEM-AVS model with organic matter in sediment (ƒOC) confirms possible bioavailability of accumulated trace elements, especially Zn, in the southern part of the lagoon, with organic matter playing an important role in SEM excess correction to affirm a nontoxic total metal sediment state. Individual trace element toxicity is dependent on the bioavailable fraction of SEM Metal on sediment, as is the influence of lagoon inflow from southern water sources on element bioavailability. Appropriate management strategies are highly recommended to mitigate any potential harmful effects on health from this heavy-metal-based pollution.

Recent sea-level changes and related engineering problems in the Lagoon of Venice (Italy)

NASA Astrophysics Data System (ADS)

Pirazzoli, Paolo Antonio

In the city of Venice, where the average altitude is only a few tens of centimetres, there has been a dangerous increase in the frequency of flooding during the past few decades. Since 1872, the average increase in flooding levels (“acqua alta”) has been about 40cm: 27cm of this is due to the local rise in mean sea-level (of which some 14cm are related to man-induced subsidence of land, and 3-7cm to geological factors), and at least 14cm are caused by hydrodynamical factors, of which about 10cm can be ascribed to man-induced tidal changes. These latter are due above all to the dredging of deep artificial channels, the reclamation of wide areas of tidal flats, and the diking of fish ponds (“valli”), which have changed the ratio between the surface of the lagoon and that of the inlets. Since the latest modification (1963-1969), the lagoon has been open to large oil tankers, thereby allowing an easier entry of storm surges arising out at sea. Indeed an incompatibility exists between the accessibility of very large boats to the lagoon and the safeguard of Venice. Several engineering projects have been proposed with a view to improving the present critical situation. These projects include underground injections to raise the islands, the construction of new embankments, a reduction in the size of the passes, new access to wide areas for the tide, and the construction of flood gates at the passes. The reliability and effects of these projects are analysed and discussed. In conclusion, the removal of the oil terminal from the lagoon and a stricter control of water pollution are considered the most urgent preliminary actions for a long term solution of the flooding problem. This would enable a decrease in the exchanges between the lagoon and the sea, without, however, reducing the depth of the navigation channels to levels inconsistent with most of the present non-oil traffic. A final measure would be the construction of mobile gates at the passes which would

Recovery of viruses from field samples of raw, digested, and lagoon-dried sludges*

PubMed Central

Sattar, Syed A.; Westwood, J. C. N.

1979-01-01

In a 22-month study, viruses were detected in 84% (62/74) of raw, 53% (19/36) of anaerobically digested, and 39% (11/28) of lagoon-dried sludge samples. Lagoon sludge contained detectable viruses (reovirus and enterovirus groups) even after 8 months of retention. Because of such prolonged virus survival in sludge, care must be taken in its disposal or utilization. PMID:311705

Holocene alluvial history and archaeological significance of the Nile floodplain in the Saqqara-Memphis region, Egypt

NASA Astrophysics Data System (ADS)

Hassan, F. A.; Hamdan, M. A.; Flower, R. J.; Shallaly, N. A.; Ebrahem, E.

2017-11-01

A suite of drill cores undertaken on the Saqqara-Memphisfloodplain revealed an array of Late Pleistocene-Holocene sediment facies that show a complex of spatio-temporal changes in sediment related to migration of the River Nile, Nile flood variations, settlement sites and climate change. The recovered data enhance our understanding of the history of the modern River Nile and its relationship to the emergence and continuity of Egyptian civilization. The floodplain of the Saqqara-Memphis area reveals a sequence of aggradation and degradation events comprising six clearly marked sedimentary units (I-VI), overlying Late Pleistocene fluvial sand and gravel (unit I). Deposition of unit II resumed during a period of high Nile flow, rapid sea level rise and locally wet climatic conditions. As a result, the floodplain was occupied by swamps and anastomosing channels. Subsequently, the Nile changed to a more stable meandering channel system with well-developed levees and flood basins (unit III). This aggradation unit was subsequently eroded by the end of Old Kingdom (ca. 4.2 kyr cal BP). The degradation hiatus was followed by a widespread layer of alluvial silt and sand indicating very high Nile floods that coincide with historical records of very high floods during the Middle Kingdom and frequently high floods during the New Kingdom (unit IV). During the last two thousand years (units VI-VII) floods generally diminished except for several notable lows and highs. Our calculations of the long-term rate of siltation during the Middle and Late Holocene suggest an average rate of 0.235 m/century rather than the commonly cited 0.09-0.12 m per century. In addition, our study of satellite imagery of the Memphite region in the context of archaeological data combined with our own geological studies reveal that the main Nile in Neolithic and Predynastic times (ca.7.0-5.0 kyr cal BP) ran along the eastern edge of the current floodplain. A lateral branch of the Nile ran along the

Depositional history and fault-related studies, Bolinas Lagoon, California

USGS Publications Warehouse

Berquist, Joel R.

1978-01-01

Studies of core sediments and seismic reflection profiles elucidate the structure and depositional history of Bolinas Lagoon, Calif., which covers 4.4 km 2 and lies in the San Andreas fault zone at the southeast corner of the Point Reyes Peninsula 20 km northwest of San Francisco. The 1906 trace of the San Andreas fault crosses the west side of the lagoon and was determined from (1) tectonically caused salt-marsh destruction indicated by comparison of 1854 and 1929 U.S. Coast and Geodetic Survey (U.S.C. & G.S.) topographic surveys, (2) formation of a tidal channel along the border of destroyed salt marshes, and (3) azimuths of the trend of the fault measured in 1907. Subsidence in the lagoon of 30 cm occurred east of the San Andreas fault in 1906. Near the east shore, seismic-reflection profiling indicates the existence of a graben fault that may connect to a graben fault on the Golden Gate Platform. Comparison of radiocarbon dates on shells and plant debris from boreholes drilled on Stinson Beach spit with a relative sea-level curve constructed for southern San Francisco Bay indicates 5.8 to more than 17.9 m of tectonic subsidence of sediments now located 33 m below mean sea level. Cored sediments indicate a marine transgression dated at 7770?65 yrs B.P. overlying freshwater organic-rich lake deposits. Fossil pollen including 2 to 8 percent Picea (spruce) indicate a late Pleistocene (?)-Early Holocene climate, cooler, wetter, and foggier than at present. Above the transgression are discontinuous and interfingering sequences of transgressive-regressive marine, estuarine, and barrier sediments that reflect rapid lateral and vertical shifts of successive depositional environments. Fossil megafauna indicate (1) accumulation in a protected, shallow-water estuary or bay, and (2) that the lagoon was probably continuously shallow and never a deep-water embayment. Analysis of grain-size parameters, pollen frequencies, and organic remains from a core near the north end of

A new model evaluating Holocene sediment dynamics: Insights from a mixed carbonate-siliciclastic lagoon (Bora Bora, Society Islands, French Polynesia, South Pacific)

NASA Astrophysics Data System (ADS)

Isaack, Anja; Gischler, Eberhard; Hudson, J. Harold; Anselmetti, Flavio S.; Lohner, Andreas; Vogel, Hendrik; Garbode, Eva; Camoin, Gilbert F.

2016-08-01

Mixed carbonate-siliciclastic lagoons of barrier reefs provide great potential as sedimentary archives focusing on paleoenvironmental and paleoclimatic changes as well as on event deposition. Sediment sources include lagoonal carbonate production, the marginal reef and the volcanic hinterland. Mixed carbonate-siliciclastic continent-attached coastal lagoons have been intensively studied, however, their isolated oceanic counterparts have been widely disregarded. Here, we present a new model of Holocene sediment dynamics in the barrier-reef lagoon of Bora Bora based on sedimentological, paleontological, geochronological and geochemical data. The lagoonal succession started with a Pleistocene soil representing the Lowstand Systems Tract. As the rising Holocene sea inundated the carbonate platform, peat accumulated locally 10,650-9400 years BP. Mixed carbonate-siliciclastic sedimentation started ca. 8700-5500 years BP and represents the Transgressive Systems Tract. During that time, sediments were characterized by relatively coarse grain size and contained high amounts of terrestrial material from the volcanic hinterland as well as carbonate sediments mainly produced within the lagoon. Siliciclastic content decreases throughout the Holocene. After the rising sea had reached its modern level, sand aprons formed between reef crest and lagoon creating transport pathways for reef-derived material leading to carbonate-dominated sedimentation ca. 6000-3000 years BP during the Highstand Systems Tract. However, mainly fine material was transported and accumulated in the lagoon while coarser grains were retained on the prograding sand apron. From ca. 4500-500 years BP, significant variations in grain-size, total organic carbon as indicator for primary productivity, Ca and Cl element intensities as qualitative indicators for carbonate availability and lagoonal salinity are seen. Such patterns could indicate event (re-)deposition and correlate with contemporaneous event deposits

Comprehensive assessment of hormones, phytoestrogens, and estrogenic activity in an anaerobic swine waste lagoon

USGS Publications Warehouse

Yost, Erin E.; Meyer, Michael T.; Dietze, Julie E.; Meissner, Benjamin M.; Williams, Mike; Worley-Davis, Lynn; Lee, Boknam; Kullman, Seth W.

2013-01-01

In this study, the distribution of steroid hormones, phytoestrogens, and estrogenic activity was thoroughly characterized within the anaerobic waste lagoon of a typical commercial swine sow operation. Three independent rounds of sampling were conducted in June 2009, April 2010, and February 2011. Thirty-seven analytes in lagoon slurry and sludge were assessed using LC/MS-MS, and yeast estrogen screen was used to determine estrogenic activity. Of the hormone analytes, steroidal estrogens were more abundant than androgens or progesterone, with estrone being the predominant estrogen species. Conjugated hormones were detected only at low levels. The isoflavone metabolite equol was by far the predominant phytoestrogen species, with daidzein, genistein, formononetin, and coumestrol present at lower levels. Phytoestrogens were often more abundant than steroidal estrogens, but contributed minimally towards total estrogenic activity. Analytes were significantly elevated in the solid phases of the lagoon; although low observed log KOC values suggest enhanced solubility in the aqueous phase, perhaps due to dissolved or colloidal organic carbon. The association with the solid phase, as well as recalcitrance of analytes to anaerobic degradation, results in a markedly elevated load of analytes and estrogenic activity within lagoon sludge. Overall, findings emphasize the importance of adsorption and transformation processes in governing the fate of these compounds in lagoon waste, which is ultimately used for broadcast application as a fertilizer.

Comprehensive Assessment of Hormones, Phytoestrogens, and Estrogenic Activity in an Anaerobic Swine Waste Lagoon

PubMed Central

2013-01-01

In this study, the distribution of steroid hormones, phytoestrogens, and estrogenic activity was thoroughly characterized within the anaerobic waste lagoon of a typical commercial swine sow operation. Three independent rounds of sampling were conducted in June 2009, April 2010, and February 2011. Thirty-seven analytes in lagoon slurry and sludge were assessed using LC/MS-MS, and yeast estrogen screen was used to determine estrogenic activity. Of the hormone analytes, steroidal estrogens were more abundant than androgens or progesterone, with estrone being the predominant estrogen species. Conjugated hormones were detected only at low levels. The isoflavone metabolite equol was by far the predominant phytoestrogen species, with daidzein, genistein, formononetin, and coumestrol present at lower levels. Phytoestrogens were often more abundant than steroidal estrogens, but contributed minimally toward total estrogenic activity. Analytes were significantly elevated in the solid phases of the lagoon; although low observed log KOC values suggest enhanced solubility in the aqueous phase, perhaps due to dissolved or colloidal organic carbon. The association with the solid phase, as well as recalcitrance of analytes to anaerobic degradation, results in a markedly elevated load of analytes and estrogenic activity within lagoon sludge. Overall, findings emphasize the importance of adsorption and transformation processes in governing the fate of these compounds in lagoon waste, which is ultimately used for broadcast application as a fertilizer. PMID:24144340

Designing a 'safe and just operating space' for the Chilika lagoon fishery of the Mahanadi delta, India

NASA Astrophysics Data System (ADS)

Cooper, Gregory; Dearing, John

2017-04-01

Annual fish production from the Chilika lagoon is worth US25-million/year, underpinning the livelihoods of 35,000 fishers and 200,000 secondary dependants. The system has a legacy of collapse, transitioning from annual production rates of 9000 tonnes to 1300 tonnes during the late-1980s, with resulting livelihood losses triggering the first recorded instances of economic migration from Chilika. Despite engineered recovery since 2000, the future persistence of Chilika's resource stock is uncertain. Climate change may strengthen freshwater and sediment delivery, promoting ecohydrological degradation through tidal outlet sedimentation, reduced salinity and freshwater weed growth. Simultaneously, human population growth, fleet motorisation and consumption demands threaten overexploitation driven collapse. These critical social-ecological drivers and feedbacks are projected into future by integrating system dynamics modelling with Monte Carlo inputs. Sustainable pathways are identified from outputs producing social-ecologically desirable futures, such as mid-century catch equalling maximum sustainable yield. The 'safe and just operating space' metaphor is regionalised by the limits of sustainable trajectories, such as the permissible number of active fishers, motorised boats and juvenile catch under alternative governance scenarios. These critical thresholds suggest policy-relevant guardrails for the sustainable governance of Chilika, in order to avoid regional productivity collapse, ecological degradation and livelihood losses. Benefits and trade-offs of alternative governance approaches are also discussed, aiding the optimisation of future regulatory decision-making.

Clipperton, a possible future for atoll lagoons

NASA Astrophysics Data System (ADS)

Charpy, L.; Rodier, M.; Couté, A.; Perrette-Gallet, C.; Bley-Loëz, C.

2010-09-01

Closure of the Clipperton Island atoll (10°17' N 109°13' W), now a meromictic lake, is estimated to have occurred between 1839 and 1849. It was still closed in 2005. Brackish waters in the upper layer (0-10 m) were oxygenated, while saline waters in the deep layer (>20 m) were anoxic. Allowing for the methodological difficulties of earlier measurements, the physical characteristics of the lagoon did not seem to have changed significantly since the last expedition (1980). The intermediate layer between brackish and saline waters was characterized by a strong density gradient and a temperature inversion of up to 1.6°C. Microbial activity, water exchange between the deep layer and surrounding oceanic waters and the geothermal flux hypothesis are discussed. The low DIN and SRP concentrations observed in the upper layer, despite high nutrient input by seabird droppings, reflect the high nutrient uptake by primary producers as attested by the elevated overall gross primary production (6.6 g C m-2 day-1), and high suspended photosynthetic biomass (2.23 ± 0.23 μg Chl a l-1) and production (263 ± 27 μg C l-1 day-1). Phytoplankton composition changed in 67 years with the advent of new taxa and the disappearance of previously recorded species. The freshwater phytoplanktonic community comprised 43 taxa: 37 newly identified during the expedition and 6 previously noted; 16 species previously found were not seen in 2005. The closure of the lagoon, combined with the positive precipitation-evaporation budget characteristic of the region, has induced drastic changes in lagoon functioning compared with other closed atolls.

Isolation and molecular identification of Naegleria fowleri from Nile river, Egypt.

PubMed

Al-Herrawy, Ahmad Z; Gad, Mahmoud A

2015-12-01

Members of the genus Naegleria are free-living amoebae distributed in various aquatic environments. Naegleria fowleri is the only species that can cause fatal primary amoebic meningoencephalitis in humans. A total of 48 Nile water samples were collected from the water stream passing though Cairo. The samples were processed for the detection of Naegleria spp. using non-nutrient agar at 45°C. The isolates of Naegleria spp. were identified based on the morphologic criteria of trophozoite, flagellated and cyst stages. Molecular characterization of the isolates was performed using PCR. The obtained results showed that Naegleria spp. were found in 45.8% of Nile water samples by means of microscopic examination. Seasonally, the highest prevalence of Naegleria spp. was recorded in summer (66.7%). Moreover, the highest prevalence of N. fowleri was recorded in summer (25%). The occurrence of heat-tolerant Naegleria spp., especially N. fowleri, in Nile water should be considered as a potential health threat.

Dissolved Copper, Nickel and Lead in Tampamachoco Lagoon and Tuxpan River Estuary in the SW Gulf of Mexico.

PubMed

Garduño Ruiz, E P; Rosales Hoz, L; Carranza Edwards, A

2016-10-01

In order to estimate the effects of a thermal power plant, physicochemical parameters and the concentrations of copper, nickel and lead were evaluated in water from both Tampamachoco Lagoon and the estuary of the Tuxpan River. Average salinities were 33.66 ups in the lagoon area, 32.77 ups in the channel that joins the lagoon and the river, and 24.74 ups in the river estuary. Total average metal concentrations were 21.95 for Cu, 29.67 for Ni and 4.31 µ/L for Pb. Sampling point 1 and samples from the bottom water of the lagoon present the highest salinities and concentrations of suspended matter, TOC, Cu, Ni and Pb.These high values may be associated with the infiltration of sea water either from plant operation or from the channel that connects the lagoon with the sea.

Identifying tsunami deposits using shell taphonomy: Sur lagoon, Oman

NASA Astrophysics Data System (ADS)

Donato, S.; Reinhardt, E.; Rothaus, R.; Boyce, J.

2007-05-01

On November 28th, 1945 an 8.1 magnitude earthquake focused in the eastern portion of the Makran subduction zone (Arabian Sea) generated a powerful tsunami that destroyed many coastal villages in Pakistan and India. Reports indicate that the tsunami also caused significant damage in Muscat, Oman, although its effects elsewhere in Oman are unknown. A thick bivalve dominated shell horizon was discovered inside the Sur lagoon, which is located on the eastern promontory of Oman (200 km south of Muscat). This shell deposit is significant because it is laterally extensive (> 1 km2), extends deep within the lagoon (>2 km), ranges in thickness from 5 - 25 cm at the sample localities, contains numerous subtidal and offshore bivalve species, and articulated subtidal and offshore bivalve species are abundant. Although there is an absence of typical tsunami indicators such as allochthonous sediment in and around the lagoon, verbal accounts, cultural evidence recovered during coring, and the absence of strong storms during the past 100 years indicates that this shell unit was caused by the 1945 tsunami. In this setting, it would be advantageous to have another proxy for tsunami detection and risk prediction. The use of shell taphonomy is one of the potential indicators and here we present new evidence of its utility. We sampled this unit in eight locations, and compared the shell taphonomy to surface shell samples collected from beach and reworked horizons in the lagoon, and to shell samples from a known tsunami and corresponding storm/ballast deposit in Israel (Reinhardt et al., 2006). Taphonomic analysis yielded promising results, as the two tsunami horizons shared excellent agreement between the amount of fragmented shells, and the percentage of shells displaying angular breaks. Both of these categories were significantly different from the percentage of fragments and angular fragments recovered from the reworked, beach, and storm/ballast deposits, indicating different

Benthic foraminiferal and organic matter compounds as proxies of environmental quality in a tropical coastal lagoon: The Itaipu lagoon (Brazil).

PubMed

Raposo, Débora; Clemente, Iara; Figueiredo, Marcos; Vilar, Amanda; Lorini, Maria Lucia; Frontalini, Fabrizio; Martins, Virgínia; Belart, Pierre; Fontana, Luiz; Habib, Renan; Laut, Lazaro

2018-04-01

Lagoons in the southeast coast of Brazil have experienced eutrophication due to the exponential increase of human population and sewage discharges. Living benthic foraminifera have demonstrated to be good bioindicators of such impacts. This study aims to evaluate the organic matter accumulation effects on the foraminiferal distribution in the Itaipu lagoon (Brazil). On the basis of the biotic and abiotic analyses, three sectors are identified. The Sector I, an inner area, is characterized by high dissolved oxygen values and foraminiferal species with preference for marine conditions, demonstrating the sea influence. The Sector II, in the mangrove margins, is associated to sandy sediment and biopolymers and mainly represented by euryhaline species. The Sector III is marked by low density or absence of living foraminifera and corresponds to a low quality organic matter enriched area (North, Southwest and Centre). Copyright © 2018 Elsevier Ltd. All rights reserved.

Clinical Manifestations and Outcomes of West Nile Virus Infection

PubMed Central

Sejvar, James J.

2014-01-01

Since the emergence of West Nile virus (WNV) in North America in 1999, understanding of the clinical features, spectrum of illness and eventual functional outcomes of human illness has increased tremendously. Most human infections with WNV remain clinically silent. Among those persons developing symptomatic illness, most develop a self-limited febrile illness. More severe illness with WNV (West Nile neuroinvasive disease, WNND) is manifested as meningitis, encephalitis or an acute anterior (polio) myelitis. These manifestations are generally more prevalent in older persons or those with immunosuppression. In the future, a more thorough understanding of the long-term physical, cognitive and functional outcomes of persons recovering from WNV illness will be important in understanding the overall illness burden. PMID:24509812

Assessing and managing water scarcity within the Nile River Transboundary Basin

NASA Astrophysics Data System (ADS)

Butts, M. B.; Wendi, D.; Jessen, O. Z.; Riegels, N. D.

2012-04-01

The Nile Basin is the main source of water in the North Eastern Region of Africa and is perhaps one of the most critical river basins in Africa as the riparian countries constitute 40% of the population on the continent but only 10% of the area. This resource is under considerable stress with rising levels of water scarcity, high population growth, watershed degradation, and loss of environmental services. The potential impacts of climate change may significantly exacerbate this situation as the water resources in the Nile Basin are critically sensitive to climate change (Conway, Hanson, Doherty, & Persechino, 2007). The motivation for this study is an assessment of climate change impacts and adaptation potential for floods and droughts within the UNEP project "Adapting to climate change induced water stress in the Nile River Basin", supported by SIDA. This project is being carried out as collaboration between DHI, the UK Met Office, and the Nile Basin Initiative (NBI). The Nile Basin exhibits highly diverse climatological and hydrological characteristics. Thus climate change impacts and adaptive capacity must be addressed at both regional and sub-basin scales. While the main focus of the project is the regional scale, sub-basin scale modelling is required to reflect variability within the basin. One of the major challenges in addressing this variability is the scarcity of data. This paper presents an initial screening modelling study of the water balance of the Nile Basin along with estimates of expected future impacts of climate change on the water balance. This initial study is focussed on the Ethiopian Highlands and the Lake Victoria regions, where the impact of climate change on rainfall is important. A robust sub-basin based monthly water balance model is developed and applied to selected sub-basins. The models were developed and calibrated using publicly available data. One of the major challenges in addressing this variability within the basin is the

Liquid and atmospheric ammonia concentrations from a dairy lagoon during an aeration experiment

NASA Astrophysics Data System (ADS)

Rumburg, Brian; Neger, Manjit; Mount, George H.; Yonge, David; Filipy, Jenny; Swain, John; Kincaid, Ron; Johnson, Kristen

Ammonia emissions from agriculture are an environmental and human health concern, and there is increasing pressure to reduce emissions. Animal agriculture is the largest global source of ammonia emissions and on a per cow basis dairy operations are the largest emitters. The storage and disposal of the dairy waste is one area where emissions can be reduced, aerobic biological treatment of wastewater being a common and effective way of reducing ammonia emissions. An aeration experiment in a dairy lagoon with two commercial aerators was performed for 1 month. Liquid concentrations of ammonia, total nitrogen, nitrite and nitrate were monitored before, during and after the experiment and atmospheric ammonia was measured downwind of the lagoon using a short-path differential optical absorption spectroscopy (DOAS) instrument with 1 ppbv sensitivity. No changes in either liquid or atmospheric ammonia concentrations were detected throughout the experiment, and neither dissolved oxygen, nitrite nor nitrate could be detected in the lagoon at any time. The average ammonia concentration at 10 sampling sites in the lagoon at a depth of 0.15 m was 650 mg l -1 and at 0.90 m it was 700 mg l -1 NH 3-N. The average atmospheric ammonia concentration 50 m downwind was about 300 ppbv. The 0.90 m depth total nitrogen concentrations and total and volatile solids concentrations decreased during the experiment due to some mixing of the lagoon but the 0.15 m depth concentrations did not decrease indicating that the aerators were not strong enough to mix the sludge off the bottom into the whole water column.

Nerve growth factor-inducible large external (NILE) glycoprotein: studies of a central and peripheral neuronal marker.

PubMed

Salton, S R; Richter-Landsberg, C; Greene, L A; Shelanski, M L

1983-03-01

The PC12 clone of pheochromocytoma cells undergoes neuronal differentiation in the presence of nerve growth factor (NGF). Concomitant with this is a significant induction in the incorporation of radiolabeled fucose or glucosamine into a 230,000-dalton cell surface glycoprotein named the NGF-Inducible Large External, or NILE, glycoprotein (GP) (McGuire, J. C., L. A. Greene, and A. V. Furano (1978) Cell 15: 357-365). In the current studies NILE GP was purified from PC12 cells using wheat germ agglutinin-agarose affinity chromatography and SDS-polyacrylamide gel electrophoresis (PAGE). Polyclonal antisera were raised against purified NILE GP and were found to selectively immunoprecipitate a single 230,000-dalton protein from detergent extracts of PC12 cells metabolically labeled with either [3H]fucose, [3H]glucosamine, or [35S]methionine. These antisera stained the surfaces of PC12 cells by indirect immunofluorescence and were cytotoxic to PC12 cells in the presence of complement. Limited treatment of PC12 cells with either trypsin or pronase produced a fucosylated 90,000-dalton immunoreactive fragment of NILE GP which remained in the membrane. Using quantitative immunoelectrophoresis, the action of NGF on NILE GP was represent an increase in the amount of protein, rather than a selective increase in carbohydrate incorporation. Immunofluorescent staining of primary cell cultures and tissue whole mounts revealed that immunologically cross-reactive NILE GP appears to be expressed on the cell surfaces (somas and neurites) of most if not all peripheral and central neurons examined. Immunoprecipitation of radiolabeled cultures showed that the cross-reactive material had an apparent molecular weight by SDS-PAGE of 225,000 to 230,000 in the peripheral nervous system and 200,000 to 210,000 in the central nervous system. NILE-cross-reactive material was also found to a small extent on Schwann cell surfaces, but not at all on a variety of other cell types. These results suggest

Identification and expression profiles of multiple genes in Nile tilapia in response to bacterial infections

USDA-ARS?s Scientific Manuscript database

To understand the molecular mechanisms involved in response of Nile tilapia (Oreochromis niloticus) to bacterial infection, suppression subtractive cDNA hybridization technique was used to identify upregulated genes in the posterior kidney of Nile tilapia at 6h post infection with Aeromonas hydrophi...

DNA Vaccine for West Nile Virus Infection in Fish Crows (Corvus ossifragus)

DTIC Science & Technology

2003-09-01

SUBJECT TERMS west Nile virus, vaccine , efficacy , crows 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT SAR 18. NUMBER OF PAGES 5 19a...A DNA vaccine for West Nile virus (WNV) was evaluat- ed to determine whether its use could protect fish crows (Corvus ossifragus) from fatal WNV...infection. Captured adult crows were given 0.5 mg of the DNA vaccine either orally or by intramuscular (IM) inoculation; control crows were inoculated or

State-of-the-lagoon reports as vehicles of cross-disciplinary integration.

PubMed

Zaucha, Jacek; Davoudi, Simin; Slob, Adriaan; Bouma, Geiske; van Meerkerk, Ingmar; Oen, Amy Mp; Breedveld, Gijs D

2016-10-01

An integrative approach across disciplines is needed for sustainable lagoon and estuary management as identified by integrated coastal zone management. The ARCH research project (Architecture and roadmap to manage multiple pressures on lagoons) has taken initial steps to overcome the boundaries between disciplines and focus on cross-disciplinary integration by addressing the driving forces, challenges, and problems at various case study sites. A model was developed as a boundary-spanning activity to produce joint knowledge and understanding. The backbone of the model is formed by the interaction between the natural and human systems, including economy and governance-based subsystems. The model was used to create state-of-the-lagoon reports for 10 case study sites (lagoons and estuarine coastal areas), with a geographical distribution covering all major seas surrounding Europe. The reports functioned as boundary objects to build joint knowledge. The experiences related to the framing of the model and its subsequent implementation at the case study sites have resulted in key recommendations on how to address the challenges of cross-disciplinary work required for the proper management of complex social-ecological systems such as lagoons, estuarine areas, and other land-sea regions. Cross-disciplinary integration is initially resource intensive and time consuming; one should set aside the required resources and invest efforts at the forefront. It is crucial to create engagement among the group of researchers by focusing on a joint, appealing overall concept that will stimulate cross-sectoral thinking and focusing on the identified problems as a link between collected evidence and future management needs. Different methods for collecting evidence should be applied including both quantitative (jointly agreed indicators) and qualitative (narratives) information. Cross-disciplinary integration is facilitated by functional boundary objects. Integration offers important

Diazotroph community succession during the VAHINE mesocosms experiment (New Caledonia Lagoon)

NASA Astrophysics Data System (ADS)

Turk-Kubo, K. A.; Frank, I. E.; Hogan, M. E.; Desnues, A.; Bonnet, S.; Zehr, J. P.

2015-06-01

The VAHINE mesocosm experiment, conducted in the low-nutrient low-chlorophyll waters of the Noumea Lagoon (coastal New Caledonia) was designed to trace the incorporation of nitrogen (N) fixed by diazotrophs into the food web, using large volume (50 m3) mesocosms. This experiment provided a unique opportunity to study the succession of different N2-fixing microorganisms (diazotrophs) and calculate in situ net growth and loss rates in response to fertilization with dissolved inorganic phosphate (DIP) over a 23 day period, using quantitative polymerase chain reaction (qPCR) assays. Inside the mesocosms, the diazotroph community assemblage was dominated by the heterocyst-forming Richelia associated with Rhizosolenia (Het-1) in the first half of the experiment, and unicellularcyanobacterial Group C (UCYN-C) became the dominant diazotroph in the second half of the experiment. Decreasing DIP concentrations following the fertilization event and increasing temperatures were significantly correlated with increasing abundances of UCYN-C. Maximum net growth rates for UCYN-C were calculated to be between 1.23 ± 0.07 and 2.16 ± 0.07 d-1 which are among the highest growth rates reported for diazotrophs. Outside the mesocosms in the Noumea Lagoon, UCYN-C abundances remained low, despite increasing temperatures, suggesting that the microbial community response to the DIP fertilization created conditions favorable for UCYN-C growth inside the mesocosms. Maximum net growth and loss rates for nine diazotroph phylotypes throughout the 23 day experiment were variable between mesocosms, and repeated fluctuations between periods of net growth and loss were commonly observed. The field population of diazotrophs in the Noumea Lagoon, was dominated by Het-1 over the course of the study period. However, eight additional diazotroph phylotypes were present in the lagoon at lower abundances, indicating a diverse field population of diazotrophs. Two ecotypes of the Braarudosphaera bigelowii

Macrobenthic molluscs from a marine - lagoonal environmental transition in Lesvos Island (Greece).

PubMed

Evagelopoulos, Athanasios; Koutsoubas, Drosos; Gerovasileiou, Vasilis; Katsiaras, Nikolaos

2016-01-01

This paper describes an occurence dataset, also including numerical abundance and biomass data, pertaining to the macrobenthic molluscan assemblages from a marine - lagoonal environmental transition. The study system was the soft-substrate benthoscape of the area of the Kalloni solar saltworks (Lesvos Island, Greece). Specifically, the study area extended from the infralittoral zone of the inner Kalloni Gulf (marine habitat) to the bottoms of the first two evaporation ponds of the Kalloni solar saltworks (lagoonal habitat). Bottom sediment samples (3 replicates) were collected with a Van Veen grab sampler (0.1 m 2 ) at four sampling sites, along a 1.5 km long line transect that spanned the marine - lagoonal environmental transition. A total of four surveys were carried out seasonally in 2004.  A total of 39,345 molluscan individuals were sorted out of the sediment samples and were identified to 71 species, belonging to the Gastropoda (36), Bivalvia (34) and Scaphopoda (1) classes. Numerical abundance and wet biomass (with shells) data are included in the dataset. The dataset described in the present paper partially fills a significant gap in the scientific literature: Because ecological research of coastal lagoons has seldom explicitly considered the marine - lagoonal habitats interface, there are no openly accessible datasets pertaining to the particular structural component of the transitional waters benthoscapes of the Mediterranean Sea. Such datasets could prove valuable in the research of the structure and functioning of transitional waters benthoscapes. The present dataset is available as a supplementary file (Suppl. material 1) and can also be accessed at http://ipt.medobis.eu/resource?r=kalloni_saltworks_phd.

Identifying nutrient sources to three lagoons at Ofu and Olosega, American Samoa using δ15N of benthic macroalgae

USGS Publications Warehouse

Garrison, Virginia H.; Kroeger, Kevin D.; Fenner, Douglas; Craig, Peter

2007-01-01

Degradation of nearshore habitats is a serious problem in some areas of American Samoa, such as in Pago Pago Harbor on Tutuila Island, and is a smaller but chronic problem in other areas. Sedimentation, pollution, nutrient enrichment from surface runoff or groundwater, and trampling are the major factors causing the changes (Peshut and Brooks, 2005). On the outer islands of Ofu and Olosega (Manu’a Islands; Fig. 1), there is an interesting contrast between relatively pristine lagoon habitats not far from comparatively degraded lagoon habitats. To’aga lagoon on the southeast side of Ofu Island (Fig. 1) has clear waters, a high diversity of corals and fishes, no human habitations, and an undeveloped watershed with no streams. To’aga lagoon is within the boundaries of the National Park of American Samoa and is the site of long-term research on coral reef resilience and global climate change. Only 3 km to the east of To’aga is a degraded lagoon that fronts Olosega Village. The Olosega lagoon is similar in size but has significantly less live coral than To’aga, and blooms of filamentous algae have been reported to cover the Olosega lagoon/reef flat bottom (unpublished data, PC; Fig. 2). The islands are influenced by the same regional-scale and biogeochemical regimes, and both islands are remnants of a volcanic caldera (Craig, 2005). Thus, local factors operating on the scale of a kilometer or less are thought to be driving the differences observed between lagoons. Land disturbance is limited to a road linking the villages, the clearing of vegetation for buildings, and two village dump sites located on the narrow strip of land between the steep slopes of the islands and the shoreline; there is no industry or associated pollution on either island. Cesspools are used for sewage disposal. Nutrient enrichment (from cesspools) of groundwater and the lagoon, as well as trampling during gleaning of reef organisms, are possible factors affecting the spatial relief

Methane in Sediments From Three Tropical, Coastal Lagoons on the Yucatan Peninsula, Mexico

NASA Astrophysics Data System (ADS)

Young, B.; Paytan, A.; Miller, L.; Herrera-Silveira, J.

2002-12-01

Tropical wetlands are significant sources of methane (CH4) to the atmosphere, and the majority of research on methane flux and cycling in the tropics has been conducted in fresh-water wetlands and lakes. However, several previous studies have shown that tropical coastal ecosystems can produce significant methane flux to the atmosphere despite the presence of moderate to marine salinities. Information regarding methane cycling within the sediments is crucial to understanding how natural and anthropogenic changes may influence these systems. We measured methane concentrations in sediments from two tropical coastal lagoons during different seasons, as well as in a third, heavily polluted, lagoon (Terminos) during the rainy season. These three lagoons, Celestun, Chelem, and Terminos, have similar vegetation, seasonal temperature and rainfall patterns, and substrate geology, but very different levels of ground water discharge and pollution. Methane concentrations in Celestun and Terminos lagoon showed high spatial variability(> 0.001 to 5 mmol kg-1 wet sediment), while sediments in Chelem Lagoon, which has near marine salinities and little sewage discharge, showed much lower variability of methane concentrations. Methane concentrations in Celestun sediments displayed two predominant patterns: some profiles contained a peak in methane concentration (1 to 2 mmole methane kg-1 wet sediment) between 5 and 15 cm below the surface while the other sediment profiles instead displayed a steady or monotonic increase in methane concentration with depth to approximately 0.025-0.080 mmol kg-1 at 10-15cm below surface followed by stable methane concentrations to the bottom of the cores (20-45 cm below the surface). A subsurface peak in methane concentrations was also found in some locations in Chelem, however, the concentrations were much lower than those measured in Celestun. Previous studies have shown that sewage pollution may drastically increase methane production in tropical

Purification and crystallization of dengue and West Nile virus NS2B–NS3 complexes

DOE Office of Scientific and Technical Information (OSTI.GOV)

D’Arcy, Allan, E-mail: allan.darcy@novartis.com; Chaillet, Maxime; Schiering, Nikolaus

Crystals of dengue serotype 2 and West Nile virus NS2B–NS3 protease complexes have been obtained and the crystals of both diffract to useful resolution. Sample homogeneity was essential for obtaining X-ray-quality crystals of the dengue protease. Controlled proteolysis produced a crystallizable fragment of the apo West Nile virus NS2B–NS3 and crystals were also obtained in the presence of a peptidic inhibitor. Both dengue and West Nile virus infections are an increasing risk to humans, not only in tropical and subtropical areas, but also in North America and parts of Europe. These viral infections are generally transmitted by mosquitoes, but maymore » also be tick-borne. Infection usually results in mild flu-like symptoms, but can also cause encephalitis and fatalities. Approximately 2799 severe West Nile virus cases were reported this year in the United States, resulting in 102 fatalities. With this alarming increase in the number of West Nile virus infections in western countries and the fact that dengue virus already affects millions of people per year in tropical and subtropical climates, there is a real need for effective medicines. A possible therapeutic target to combat these viruses is the protease, which is essential for virus replication. In order to provide structural information to help to guide a lead identification and optimization program, crystallizations of the NS2B–NS3 protease complexes from both dengue and West Nile viruses have been initiated. Crystals that diffract to high resolution, suitable for three-dimensional structure determinations, have been obtained.« less

Atoll-phosphate genesis: Role of lagoonal biomass and possible role of endo-upwelling processes in phosphate concentration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Trichet, J.; Rougerie, F.

1990-06-01

Sedimentological and hydrogeological data in Niau, a closed atoll in French Polynesia where P-concentration has been measured, suggest the role played by lagoonal organic matter in P-accumulation and the possible role of endo-upwelling processes in P-input in the system. A 15 m deep core through the lagoonal deposits shows the succession of organic-rich strata in which the P-content can reach up to 1.3% P{sub 2}O{sub 5}. Such a pattern suggests that, whatever the source of P within the lagoon (lagoonal water, bird guano, or endo-upwelled solutions, see below), this element is likely to be incorporated in quantitatively important lagoonal biomassmore » whose decay releases phosphorus back to the sediment. An example of such biomass and organic matter is given by the large amounts of cyano-bacterial organic matter that are present in the lagoon of Niau. A source for island phosphate has recently been proposed to be relatively deep seawater, which would be endo-upwelled from depths of hundreds of meters ({approximately}500 m, where P content is approximately 1.5 mmol.m{sup {minus}3} PO{sub 4}-P) through the permeable reef-body up to its surface (i.e., to its lagoonal waters, where P content reaches 5 mmol.m{sup {minus}3} in Niau atoll). The energy necessary for the transport of such solutions would be geothermal (at the bottom of the water column, i.e., close to the volcanic substrate of the reef body) and solar at its top through evaporation.« less

Tet and sul antibiotic resistance genes in livestock lagoons of various operation type, configuration, and antibiotic occurrence

USGS Publications Warehouse

McKinney, C.W.; Loftin, K.A.; Meyer, M.T.; Davis, J.G.; Pruden, A.

2010-01-01

Although livestock operations are known to harbor elevated levels of antibiotic resistant bacteria, few studies have examined the potential of livestock waste lagoons to reduce antibiotic resistance genes (ARGs). The purpose of this study was to determine the prevalence and examine the behavior of tetracycline [tet(O) and tet(W)] and sulfonamide [sul(I) and su/(II)] ARGsin a broad cross-section of livestock lagoons within the same semiarid western watershed. ARGs were monitored for one year in the water and the settled solids of eight lagoon systems by quantitative polymerase chain reaction. In addition, antibiotic residues and various bulk water quality constituents were analyzed. It was found that the lagoons of the chicken layer operation had the lowest concentrations of both tet and sul ARGs and low total antibiotic concentrations, whereas su ARGs were highest in the swine lagoons, which generally corresponded to the highest total antibiotic concentrations. A marginal benefit of organic and small dairy operations also was observed compared to conventional and large dairies, respectively. In all lagoons, su ARGs were observed to be generally more recalcitrant than tet ARGs. Also, positive correlations of various bulk water quality constituents were identified with tet ARGs but not sul ARGs. Significant positive correlations were identified between several metals and tet ARGs, but Pearson's correlation coefficients were mostly lower than those determined between antibiotic residues and ARGs. This study represents a quantitative characterization of ARGs in lagoons across a variety of livestock operations and provides insight into potential options for managing antibiotic resistance emanating from agricultural activities. ?? 2010 American Chemical Society.

New insights into hydrologic sources and sinks in the Nile Basin: A multi-source satellite data analysis

NASA Astrophysics Data System (ADS)

Senay, G. B.; Velpuri, N. M.; Bohms, S.; Demissie, Y.; Gebremichael, M.

2014-12-01

The Nile River is the longest in the world with a length of 6,800 km. However, the contrast between the length of the river or the size of the basin and the comparatively small volume of basin runoff generated is a unique feature of the Nile Basin. Due to non-availability of in-situ hydrologic data, we do not clearly understand the spatial distribution of hydrologic sources and sinks and how much they control input-output dynamics? In this study, we integrated satellite-derived precipitation, and modeled evapotranspiration data (2000-2012) to describe spatial variability of hydrologic sources and sinks in the Nile Basin. We also used long-term gridded runoff and river discharge data (1869-1984) to understand the discrepancy in the observed and expected flow along the Nile River. Results indicate that over 2000-2012 period, 4 out of 11 countries (Ethiopia, Tanzania, Kenya, and Uganda) in the Nile basin showed a positive water balance while three downstream countries (South Sudan, Sudan, and Egypt) showed a negative balance. The top three countries that contribute most to the flow are Ethiopia, Tanzania and Kenya. The study revealed that ~85% of the runoff generated in the Equatorial region is lost in an inter-station basin that includes the Sudd wetlands in South Sudan; this proportion is higher than the reported loss of 50% at the Sudd wetlands alone. The loss in runoff and flow volume at different sections of the river tend to be more than what can be explained by evaporation losses, suggesting a potential recharge to deeper aquifers that are not connected to the Nile channel systems. On the other hand, we also found that the expected average annual Nile flow at Aswan is larger (97 km3) than the reported amount (84 km3). Gravity Recovery and Climate Experiment (GRACE) mass deviation in storage data analysis showed that at annual time-scales, the Nile Basin shows storage change is substantial while over longer-time periods, it is minimal (<1% of basin precipitation

Socioeconomic dynamics of water quality in the Egyptian Nile

NASA Astrophysics Data System (ADS)

Malik, Maheen; Nisar, Zainab; Karakatsanis, Georgios

2016-04-01

The Nile River remains the most important source of freshwater for Egypt as it accounts for nearly all of the country's drinking and irrigation water. About 95% of the total population is accounted to live along the Banks of the Nile(1). Therefore, water quality deterioration in addition to general natural scarcity of water in the region(2) is the main driver for carrying out this study. What further aggravates this issue is the water conflict in the Blue Nile region. The study evaluates different water quality parameters and their concentrations in the Egyptian Nile; further assessing the temporal dynamics of water quality in the area with (a) the Environmental Kuznets Curve (EKC)(3) and (b) the Jevons Paradox (JP)(4) in order to identify water quality improvements or degradations using selected socioeconomic variables(5). For this purpose various environmental indicators including BOD, COD, DO, Phosphorus and TDS were plotted against different economic variables including Population, Gross Domestic Product (GDP), Annual Fresh Water Withdrawal and Improved Water Source. Mathematically, this was expressed by 2nd and 3rd degree polynomial regressions generating the EKC and JP respectively. The basic goal of the regression analysis is to model and highlight the dynamic trend of water quality indicators in relation to their established permissible limits, which will allow the identification of optimal future water quality policies. The results clearly indicate that the dependency of water quality indicators on socioeconomic variables differs for every indicator; while COD was above the permissible limits in all the cases despite of its decreasing trend in each case, BOD and phosphate signified increasing concentrations for the future, if they continue to follow the present trend. This could be an indication of rebound effect explained by the Jevons Paradox i.e. water quality deterioration after its improvement, either due to increase of population or intensification

Detection and sequencing of West Nile virus RNA from human urine and serum samples during the 2014 seasonal period.

PubMed

Nagy, Anna; Bán, Enikő; Nagy, Orsolya; Ferenczi, Emőke; Farkas, Ágnes; Bányai, Krisztián; Farkas, Szilvia; Takács, Mária

2016-07-01

West Nile virus, a widely distributed mosquito-borne flavivirus, is responsible for numerous animal and human infections in Europe, Africa and the Americas. In Hungary, the average number of human infections falls between 10 and 20 cases each year. The severity of clinically manifesting infections varies widely from the milder form of West Nile fever to West Nile neuroinvasive disease (WNND). In routine laboratory diagnosis of human West Nile virus infections, serological methods are mainly applied due to the limited duration of viremia. However, recent studies suggest that detection of West Nile virus RNA in urine samples may be useful as a molecular diagnostic test for these infections. The Hungarian National Reference Laboratory for Viral Zoonoses serologically confirmed eleven acute human infections during the 2014 seasonal period. In three patients with neurological symptoms, viral RNA was detected from both urine and serum specimens, albeit for a longer period and in higher copy numbers with urine. Phylogenetic analysis of the NS3 genomic region of three strains and the complete genome of one selected strain demonstrated that all three patients had lineage-2 West Nile virus infections. Our findings reaffirm the utility of viral RNA detection in urine as a molecular diagnostic procedure for diagnosis of West Nile virus infections.

Alterations in macroinvertebrate spatial patterns in coastal lagoons: Óbidos (NW coast of Portugal) 1984 versus 2002

NASA Astrophysics Data System (ADS)

Rodrigues, Ana Maria; Quintino, Victor; Pereira, Fábio; Freitas, Rosa

2012-09-01

The macroinvertebrate spatial distribution patterns in the Lagoon of Óbidos were studied in 1984 and revisited in 2002. The overall surficial sediments and benthic community patterns show consistent similarities in the two sampling periods, but also important differences. The lagoon is relatively shallow, with about 1/3 of the area covered with extensive intertidal sand banks. These are interrupted by a navigation channel bordering the northern margin (1984) and, following dredging operations, a new navigation channel was opened along the southern margin (2002). The sediments in the navigation channels were coarser and with less percentage of fines in 2002 than in 1984. Arthropods dominated the species richness and abundance in 1984, but were much less important in 2002, when the community was dominated by molluscs and annelids, both in species numbers as well as in abundance. In 1984, the structure of the macrofauna communities closely followed a general model proposed for Atlantic and Mediterranean lagoons, with the marine, the transition and the lagoon communities occupying very well defined areas. This gradient was in accordance with an increase in the fines and organic matter content directed inwards allowing for the coexistence of several characteristic lagoon species with others characteristic of organic enriched sediments. In 2002 this spatial pattern is still recognized but the marine and the transition communities are spatially mixed, occupying both the entrance region and the navigation channels, whereas the characteristic lagoon community identified in 1984 was only recognized in a group of sites located along the southern margin in 2002. Several species show very important changes in their distribution extent in the lagoon system. These changes essentially show a generalized inward expansion of the distribution range of the marine species, in agreement with a larger influence of marine conditions toward the inner areas of the lagoon. This study shows

The structure and productivity of the Thalassia testudinum community in Bon Accord Lagoon, Tobago.

PubMed

Juman, Rahanna A

2005-05-01

The Thalassia testudinum dominated seagrass community in the Buccoo Reef/ Bon Accord Lagoon Marine Park, measures 0.5 km(2) and is part of a contiguous coral reef, seagrass bed and mangrove swamp system in southwest Tobago. 7 testudinum coverage, productivity and percent turnover rates were measured from February 1998 to February 1999 at four sample locations, while total T. testudinum biomass was measured at two locations in the lagoon from 1992-2002. Productivity and turnover rates varied spatially and seasonally. They were higher in the back-reef area than in the mangrove-fringed lagoon, and were lowest at locations near to a sewage outfall. 7 testudinum coverage ranged from 6.6% in the lagoon to 68.5% in the back-reef area while productivity ranged from 3.9 to 4.9 g dry wt m(-2) d(-1) . Productivity and percentage turnover rates were higher in the dry season (January-June) than in the wet season (July-December). Productivity ranged from 3.0 in the wet season to 5.0 g dry wt m2 d-' in the dry season while percentage turnover rates ranged from 4.2% to 5.6%. Total Thalassia biomass and productivity in Bon Accord Lagoon were compared to six similar sites in the Caribbean that also participate in the Caribbean Coastal Marine Productivity Program (CARICOMP). This seagrass community is being negatively impacted by nutrient-enriched conditions.

Yellow fever vector live-virus vaccines: West Nile virus vaccine development.

PubMed

Arroyo, J; Miller, C A; Catalan, J; Monath, T P

2001-08-01

By combining molecular-biological techniques with our increased understanding of the effect of gene sequence modification on viral function, yellow fever 17D, a positive-strand RNA virus vaccine, has been manipulated to induce a protective immune response against viruses of the same family (e.g. Japanese encephalitis and dengue viruses). Triggered by the emergence of West Nile virus infections in the New World afflicting humans, horses and birds, the success of this recombinant technology has prompted the rapid development of a live-virus attenuated candidate vaccine against West Nile virus.

Holocene evolution of a wave-dominated fan-delta: Godavari delta, India

NASA Astrophysics Data System (ADS)

Saito, Y.; Nageswara Rao, K.; Nagakumar, K.; Demudu, G.; Rajawat, A.; Kubo, S.; Li, Z.

2013-12-01

The Godavari delta is one of the world's largest wave-dominated deltas. The Godavari River arises in the Western Ghats near the west coast of India and drains an area of about 3.1x10^5 km^2, flowing about 1465 km southeast across the Indian peninsula to the Bay of Bengal. The Godavari delta consists of a gentle seaward slope from its apex (12 m elevation) at Rajahmundry and a coastal beach-ridge plain over a distance of about 75 km and covers ~5200 km^2 as a delta plain. The river splits into two major distributary channels, the Gautami and the Vasishta, at a barrage constructed in the mid-1800s. The coastal environment of the deltaic coast is microtidal (~1 m mean tidal range) and wave-dominated (~1.5 m mean wave height in the June-September SW monsoon season, ~0.8 m in the NE monsoon season). Models of the Holocene evolution of the Godavari delta have changed from a zonal progradation model (e.g. Nageswara Rao & Sadakata, 1993) to a truncated cuspate delta model (Nageswara Rao et al., 2005, 2012). Twelve borehole cores (340 m total length), taken in the coastal delta plain during 2010-2013, yielded more than 100 C-14 dates. Sediment facies and C-14 dates from these and previous cores and remote-sensing data support a new delta evolution model. The Holocene coastal delta plain is divided into two parts by a set of linear beach ridges 12-14 km landward from the present shoreline in the central part of the delta. The location of the main depocenter (lobe) has shifted during the Holocene from 1) the center to 2) the west, 3) east, 4) center, 5) west, and 6) east. The linear beach ridges separate the first three from the last three stages. These lobe shifts are controlled by river channel shifts near the apex. Just as the current linear shoreline of the central part of the delta and the concave-up nearshore topography are the result of coastal erosion of a cuspate delta, the linear beach ridges indicate a former eroded shoreline. An unconformity within the deltaic

Usutu virus persistence and West Nile virus inactivity in the Emilia-Romagna region (Italy) in 2011.

PubMed

Calzolari, Mattia; Bonilauri, Paolo; Bellini, Romeo; Albieri, Alessandro; Defilippo, Francesco; Tamba, Marco; Tassinari, Massimo; Gelati, Antonio; Cordioli, Paolo; Angelini, Paola; Dottori, Michele

2013-01-01

The circulation of West Nile virus and Usutu virus was detected in the Emilia-Romagna region in 2008 and 2009. To evaluate the extent of circulation of both viruses, environmental surveillance, based on bird and mosquito testing, was conducted in 2008 and gradually improved over the years. In February-March 2009-2011, 5,993 hibernating mosquitoes were manually sampled, out of which 80.1% were Culex pipiens; none tested positive for the viruses. From 2008 to 2011, 946,213 mosquitoes, sampled between May and October, were tested; 86.5% were Cx. pipiens. West Nile virus was detected in 32 Cx. pipiens pools, and Usutu virus was detected in 229 mosquito pools (217 Cx. pipiens, 10 Aedes albopictus, one Anopheles maculipennis s.l., and one Aedes caspius). From 2009 to 2011, of 4,546 birds collected, 42 tested positive for West Nile virus and 48 for Usutu virus. West Nile virus and Usutu virus showed different patterns of activity during the 2008-2011 surveillance period. West Nile virus was detected in 2008, 2009, and 2010, but not in 2011. Usutu virus, however, was continuously active throughout 2009, 2010, and 2011. The data strongly suggest that both viruses overwinter in the surveyed area rather than being continually reintroduced every season. The lack of hibernating mosquitoes testing positive for the viruses and the presence of positive birds sampled early in the season support the hypothesis that the viruses overwinter in birds rather than in mosquitoes. Herd immunity in key bird species could explain the decline of West Nile virus observed in 2011, while the persistence of Usutu virus may be explained by not yet identified reservoirs. Reported results are comparable with a peri-Mediterranean circulation of the West Nile virus lineage 1 related strain, which became undetectable in the environment after two to three years of obvious circulation.

Clinical and pathologic features of West Nile virus infection in native North American owls (Family strigidae).

PubMed

Fitzgerald, S D; Patterson, J S; Kiupel, M; Simmons, H A; Grimes, S D; Sarver, C F; Fulton, R M; Steficek, B A; Cooley, T M; Massey, J P; Sikarskie, J G

2003-01-01

Since the initial report of West Nile virus in the northeastern United States in 1999, the virus has spread rapidly westward and southward across the country. In the summer of 2002, several midwestern states reported increased cases of neurologic disease and mortality associated with West Nile virus infection in various native North American owl species. This report summarizes the clinical and pathologic findings for 13 captive and free-ranging owls. Affected species were all in the family Strigidae and included seven snowy owls (Nyctea scandiaca), four great-horned owls (Bubo virginianus), a barred owl (Strix varia), and a short-eared owl (Asio flammeus). Neurologic signs identified included head tilt, uncoordinated flight, paralysis, tremors, and seizures. Owls that died were screened for flaviviral proteins by immunohistochemical staining of formalin-fixed tissues, followed by specific polymerase chain reaction assay to confirm West Nile virus with fresh tissues when available. Microscopic lesions were widespread, involving brain, heart, liver, kidney, and spleen, and were typically nonsuppurative with infiltration by predominantly lymphocytes and plasma cells. Lesions in owls were much more severe than those previously reported in corvids such as crows, which are considered highly susceptible to infection and are routinely used as sentinel species for monitoring for the presence and spread of West Nile virus. This report is the first detailed description of the pathology of West Nile virus infection in Strigiformes and indicates that this bird family is susceptible to natural infection with West Nile virus.

Tracing Nile sediment sources by Sr and Nd isotope signatures (Uganda, Ethiopia, Sudan)

NASA Astrophysics Data System (ADS)

Padoan, Marta; Garzanti, Eduardo; Harlavan, Yehudit; Villa, Igor Maria

2011-06-01

Strontium and neodymium isotopes, measured on diverse mud and sand fractions of sediment in transit along all major Nile branches, identify detritus sourced from Precambrian basements, Mesozoic strata, and Tertiary volcanic rocks exposed along the shoulders of the East African rift and in Ethiopian highlands. Sr and Nd isotopic ratios reflect the weighted average of detrital components generated in different catchments, allowing us to discriminate provenance, calculate sediment budgets, and investigate grain-size and hydraulic-sorting effects. 87Sr/ 86Sr and 143Nd/ 144Nd range, respectively, from as high as 0.722 and as low as 0.5108 for sediment derived from Archean gneisses in northern Uganda, to 0.705 and 0.5127 for sediment derived from Neoproterozoic Ethiopian and Eritrean basements. 87Sr/ 86Sr and 143Nd/ 144Nd, ranging 0.705-0.709 and 0.5124-0.5130 for Blue Nile tributaries, are 0.704-0.705 and 0.5127-0.5128 for largely volcaniclastic sediments of River Tekeze-Atbara, and 0.705-0.706 and 0.5126-0.5127 for main Nile sediments upstream Lake Nasser. Model mantle derivation ages ( tDM), oldest in Uganda where sediment is principally derived from the Congo Craton (3.4-3.0 Ga for Victoria and Albert Nile), progressively decrease northward across the Saharan Metacraton, from 2.6 Ga (Bahr el Jebel in South Sudan), to 2.4-2.2 Ga (Bahr ez Zeraf across the Sudd), and finally 1.6-1.3 Ga (White Nile upstream Khartoum). Instead, tDM ages of Sobat mud increase from 0.9 to 1.5 Ga across the Machar marshes. TDM ages are younger for sediments shed by Ethiopian (1.2-0.7 Ga) and Eritrean basements (1.5-1.2 Ga), and youngest for sediments shed from Ethiopian flood basalts (0.3-0.2 Ga). Integrated geochemical, mineralogical, and settling-equivalence analyses suggest influence on the Nd isotopic signal by volcanic lithic grains and titanite rather than by LREE-rich monazite or allanite. Because contributions by ultradense minerals is subordinate, intrasample variability of Sr and

Actin filaments participate in West Nile (Sarafend) virus maturation process.

PubMed

Chu, J J H; Choo, B G H; Lee, J W M; Ng, M L

2003-11-01

West Nile (Sarafend) virus has previously been shown to egress by budding at the plasma membrane of infected cells, but relatively little is known about the mechanism involved in this mode of release. During the course of this study, it was discovered that actin filaments take part in the virus maturation process. Using dual-labeled immunofluorescence and immunoelectron microscopy at late infection (10 hr p.i.), co-localization of viral structural (envelope and capsid) proteins with actin filaments was confirmed. The virus structural proteins were also immunoprecipitated with anti-actin antibody, further demonstrating the strong association between the two components. Perturbation of actin filaments by cytochalasin B strongly inhibited the release of West Nile virus (approximately 10,000-fold inhibition) when compared with the untreated cells. Infectious virus particles were recovered after the removal of cytochalasin B. Further confirmation was obtained when nucleocapsid particles were found associated with disrupted actin filaments at the periphery of cytochalasin B-treated cells. Together, these results showed that actin filaments do indeed have a key role in the release of West Nile (Sarafend) virions. Copyright 2003 Wiley-Liss, Inc.

Lake Nasser on Nile River in Egypt as seen from the Apollo 7 spacecraft

NASA Image and Video Library

1968-10-12

Lake Nasser on the Nile River in southeastern United Arab Republic (Egypt) as seen from the Apollo 7 spacecraft during its 10th revolution of the earth. Photographed from an altitude of 130 nautical miles, at ground elapsed time of 14 hours and 56 minutes. Lake Nasser was created by the contruction of the Aswan Dam on the Nile.

Prediction of future climate change for the Blue Nile, using RCM nested in GCM

NASA Astrophysics Data System (ADS)

Sayed, E.; Jeuland, M.; Aty, M.

2009-04-01

Although the Nile River Basin is rich in natural resources, it faces many challenges. Rainfall is highly variable across the region, on both seasonal and inter-annual scales. This variability makes the region vulnerable to droughts and floods. Many development projects involving Nile waters are currently underway, or being studied. These projects will lead to land-use patterns changes and water distribution and availability. It is thus important to assess the effects of a) these projects and b) evolving water resource management and policies, on regional hydrological processes. This paper seeks to establish a basis for evaluation of such impacts within the Blue Nile River sub-basin, using the RegCM3 Regional Climate Model to simulate interactions between the land surface and climatic processes. We first present results from application of this RCM model nested with downscaled outputs obtained from the ECHAM5/MPI-OM1 transient simulations for the 20th Century. We then investigate changes associated with mid-21st century emissions forcing of the SRES A1B scenario. The results obtained from the climate model are then fed as inputs to the Nile Forecast System (NFS), a hydrologic distributed rainfall runoff model of the Nile Basin, The interaction between climatic and hydrological processes on the land surface has been fully coupled. Rainfall patterns and evaporation rates have been generated using RegCM3, and the resulting runoff and Blue Nile streamflow patterns have been simulated using the NFS. This paper compares the results obtained from the RegCM3 climate model with observational datasets for precipitation and temperature from the Climate Research Unit (UK) and the NASA Goddard Space Flight Center GPCP (USA) for 1985-2000. The validity of the streamflow predictions from the NFS is assessed using historical gauge records. Finally, we present results from modeling of the A1B emissions scenario of the IPCC for the years 2034-2055. Our results indicate that future

Recent progress in West Nile virus diagnosis and vaccination

PubMed Central

2012-01-01

West Nile virus (WNV) is a positive-stranded RNA virus belonging to the Flaviviridae family, a large family with 3 main genera (flavivirus, hepacivirus and pestivirus). Among these viruses, there are several globally relevant human pathogens including the mosquito-borne dengue virus (DENV), yellow fever virus (YFV), Japanese encephalitis virus (JEV) and West Nile virus (WNV), as well as tick-borne viruses such as tick-borne encephalitis virus (TBEV). Since the mid-1990s, outbreaks of WN fever and encephalitis have occurred throughout the world and WNV is now endemic in Africa, Asia, Australia, the Middle East, Europe and the Unites States. This review describes the molecular virology, epidemiology, pathogenesis, and highlights recent progress regarding diagnosis and vaccination against WNV infections. PMID:22380523

Wind effects on prey availability: How northward migrating waders use brackish and hypersaline lagoons in the sivash, Ukraine

NASA Astrophysics Data System (ADS)

Verkuil, Yvonne; Koolhaas, Anita; Van Der Winden, Jan

Large numbers of waders migrating northward in spring use the Sivash, a large system of shallow, brackish and hypersaline lagoons in the Black Sea and Azov Sea region (Ukraine). The bottoms of these lagoons are often uncovered by the wind. Hence, for waders the time and space available for feeding depend on wind conditions. In hypersaline lagoons the benthic and pelagic fauna was very poor, consisting mainly of chironomid larvae (0.19 g AFDM·m -2) and brine shrimps Artemia salina, respectively. Brine shrimp abundance was correlated with salinity, wind force, wind direction and water depth. Dunlin Calidris alpina and curlew sandpiper Calidris ferruginea were the only species feeding on brine shrimp. As brine shrimp densities are higher in deeper water, smaller waders such as broad-billed sandpipers Limicola falcinellus are too short-legged to reach exploitable densities of brine shrimp. In brackish lagoons the benthic and pelagic fauna was rich, consisting of polychaetes, bivalves, gastropods, chironomid larvae, isopods and amphipods (8.9 to 30.5 g AFDM·m -2), but there were no brine shrimps. Prey biomass increased with the distance from the coast, being highest on the site that was most frequently inundated. Dunlin, broad-billed sandpiper and grey plover Pluvialis squatarola were the most abundant birds in the brackish lagoon. Due to the effects of wind-tides only a small area was usually available as a feeding site. Gammarus insensibilis was the alternative prey resource in the water layer, and their density varied with wind direction in the same way as brine shrimp. Curlew sandpipers and dunlins in the hypersaline lagoons and broad-billed sandpipers in the brackish lagoons often changed feeding sites, probably following the variation in prey availability. Only because of the large size and variety of lagoons are waders in the Sivash always able to find good feeding sites.

Potential changes in bacterial metabolism associated with increased water temperature and nutrient inputs in tropical humic lagoons.

PubMed

Scofield, Vinicius; Jacques, Saulo M S; Guimarães, Jean R D; Farjalla, Vinicius F

2015-01-01

Temperature and nutrient concentrations regulate aquatic bacterial metabolism. However, few studies have focused on the effect of the interaction between these factors on bacterial processes, and none have been performed in tropical aquatic ecosystems. We analyzed the main and interactive effects of changes in water temperature and N and P concentrations on bacterioplankton production (BP), bacterioplankton respiration (BR) and bacterial growth efficiency (BGE) in tropical coastal lagoons. We used a factorial design with three levels of water temperature (25, 30, and 35°C) and four levels of N and/or P additions (Control, N, P, and NP additions) in five tropical humic lagoons. When data for all lagoons were pooled together, a weak interaction was observed between the increase in water temperature and the addition of nutrients. Water temperature alone had the greatest impact on bacterial metabolism by increasing BR, decreasing BP, and decreasing BGE. An increase of 1°C lead to an increase of ~4% in BR, a decrease of ~0.9% in BP, and a decrease of ~4% in BGE. When data were analyzed separately, lagoons responded differently to nutrient additions depending on Dissolved Organic Carbon (DOC) concentration. Lagoons with lowest DOC concentrations showed the strongest responses to nutrient additions: BP increased in response to N, P, and their interaction, BR increased in response to N and the interaction between N and P, and BGE was negatively affected, mainly by the interaction between N and P additions. Lagoons with the highest DOC concentrations showed almost no significant relationship with nutrient additions. Taken together, these results show that different environmental drivers impact bacterial processes at different scales. Changes of bacterial metabolism related to the increase of water temperature are consistent between lagoons, therefore their consequences can be predicted at a regional scale, while the effect of nutrient inputs is specific to different

Potential changes in bacterial metabolism associated with increased water temperature and nutrient inputs in tropical humic lagoons

PubMed Central

Scofield, Vinicius; Jacques, Saulo M. S.; Guimarães, Jean R. D.; Farjalla, Vinicius F.

2015-01-01

Temperature and nutrient concentrations regulate aquatic bacterial metabolism. However, few studies have focused on the effect of the interaction between these factors on bacterial processes, and none have been performed in tropical aquatic ecosystems. We analyzed the main and interactive effects of changes in water temperature and N and P concentrations on bacterioplankton production (BP), bacterioplankton respiration (BR) and bacterial growth efficiency (BGE) in tropical coastal lagoons. We used a factorial design with three levels of water temperature (25, 30, and 35°C) and four levels of N and/or P additions (Control, N, P, and NP additions) in five tropical humic lagoons. When data for all lagoons were pooled together, a weak interaction was observed between the increase in water temperature and the addition of nutrients. Water temperature alone had the greatest impact on bacterial metabolism by increasing BR, decreasing BP, and decreasing BGE. An increase of 1°C lead to an increase of ~4% in BR, a decrease of ~0.9% in BP, and a decrease of ~4% in BGE. When data were analyzed separately, lagoons responded differently to nutrient additions depending on Dissolved Organic Carbon (DOC) concentration. Lagoons with lowest DOC concentrations showed the strongest responses to nutrient additions: BP increased in response to N, P, and their interaction, BR increased in response to N and the interaction between N and P, and BGE was negatively affected, mainly by the interaction between N and P additions. Lagoons with the highest DOC concentrations showed almost no significant relationship with nutrient additions. Taken together, these results show that different environmental drivers impact bacterial processes at different scales. Changes of bacterial metabolism related to the increase of water temperature are consistent between lagoons, therefore their consequences can be predicted at a regional scale, while the effect of nutrient inputs is specific to different

Diazotroph community succession during the VAHINE mesocosm experiment (New Caledonia lagoon)

NASA Astrophysics Data System (ADS)

Turk-Kubo, K. A.; Frank, I. E.; Hogan, M. E.; Desnues, A.; Bonnet, S.; Zehr, J. P.

2015-12-01

The VAHINE mesocosm experiment, conducted in the low-nutrient low-chlorophyll waters of the Noumea lagoon (coastal New Caledonia) was designed to trace the incorporation of nitrogen (N) fixed by diazotrophs into the food web, using large volume (50 m3) mesocosms. This experiment provided a unique opportunity to study the succession of different N2-fixing microorganisms (diazotrophs) and calculate in situ net growth and mortality rates in response to fertilization with dissolved inorganic phosphate (DIP) over a 23-day period, using quantitative polymerase chain reaction (qPCR) assays targeting widely distributed marine diazotroph lineages. Inside the mesocosms, the most abundant diazotroph was the heterocyst-forming Richelia associated with Rhizosolenia (Het-1) in the first half of the experiment, while unicellular cyanobacterial Group C (UCYN-C) became abundant during the second half of the experiment. Decreasing DIP concentrations following the fertilization event and increasing temperatures were significantly correlated with increasing abundances of UCYN-C. Maximum net growth rates for UCYN-C were calculated to range between 1.23 ± 0.07 and 2.16 ± 0.07 d-1 in the mesocosms, which are among the highest growth rates reported for diazotrophs. Outside the mesocosms in the New Caledonia lagoon, UCYN-C abundances remained low, despite increasing temperatures, suggesting that the microbial community response to the DIP fertilization created conditions favorable for UCYN-C growth inside the mesocosms. Diazotroph community composition analysis using PCR targeting a component of the nitrogenase gene (nifH) verified that diazotrophs targeted in qPCR assays were collectively among the major lineages in the lagoon and mesocosm samples, with the exception of Crocosphaera-like phylotypes, where sequence types not typically seen in the oligotrophic ocean grew in the mesocosms. Maximum net growth and mortality rates for nine diazotroph phylotypes throughout the 23-day

Visualising DNA in Classrooms Using Nile Blue

ERIC Educational Resources Information Center

Milne, Christine; Roche, Scott; McKay, David

2008-01-01

Giving students the opportunity to extract, manipulate and visualise DNA molecules enhances a constructivist approach to learning about modern techniques in biology and biotechnology Visualisation usually requires agarose gel electrophoresis and staining. In this article, we report on an alternative DNA stain, Nile Blue A, that may be used in the…

Water-quality monitoring and biological integrity assessment in the Indian River Lagoon, Florida: Status, trends, and loadings (1988--1994)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sigua, G.C.; Steward, J.S.; Tweedale, W.A.

2000-02-01

The Indian River Lagoon (IRL) system that extends from Ponce DeLeon inlet to Jupiter inlet is comprised of three interconnected estuarine lagoons: The Mosquito Lagoon (ML), the Banana River Lagoon (BRL), and the Indian River Lagoon. The declines in both the aerial coverage and species diversity of seagrass communities within the IRL system are believed to be due in part to continued degradation of water quality. Large inflows of phosphorus (P) and nitrogen (N)-laden storm-water from urban areas an agricultural land have been correlated with higher chlorophyll a production in the central, south central, and the south segments of themore » lagoon. In a system as large and complex as the lagoon, N and P limitations are potentially subject to significant spatial and temporal variability. Total Kjeidahl nitrogen (TN) was higher in the north and lower in the south. The reverse pattern was observed for total P (TP), i.e., lowest in the north and highest at the south ends of the IRL. This increased P concentration in the SIRL appears to have a significantly large effect on chlorophyll a production compared with the other segments, as indicated by stepwise regression statistics. This relationship can be expressed as follows: South IRL [chlorophyll a] = {minus}8.52 + 162.41 [orthophosphate] + 7.86 [total nitrogen] + 0.38 [turbidity]; R{sup 2} = 0.98**.« less

Earth observations during STS-58

NASA Image and Video Library

1998-07-28

STS058-92-064 (18 Oct-1 Nov 1993) --- This oblique view, looking northeast from central Egypt, shows great expanses of the sand covered and rocky Western Desert in the foreground (bottom). The dark patches bottom right are the Dakhla Oases on the south side of an escarpment. For centuries camel trains have moved from here to the Nile Valley, seen here as a broad green line winding through the desert. The northern half of Egypt's Nile appears here, from about the latitude of Luxor to the delta. Green colors indicate the small area of crops which feed Egypt's population of 55 million. The Nile Delta is partly obscured by a band of clouds, but can be discerned at the coast as a flattened triangle of green. The smaller triangle close by is the Faiyum Basin, a depression irrigated by water from the Nile. The coast of the Mediterranean Sea appears left.

Anaerobic Transformation of Furfural by Methanococcus deltae (Delta)LH

PubMed Central

Belay, N.; Boopathy, R.; Voskuilen, G.

1997-01-01

Methanococcus deltae (Delta)LH was grown on H(inf2)-CO(inf2) in the presence of various concentrations of furfural. Furfural at higher concentrations, namely, 20 and 25 mM, inhibited growth of this organism. At concentration of 5 and 10 mM, no inhibition of growth was observed. The other methanogens in this study were not inhibited by 10 mM furfural. Among the methanogens tested, M. deltae was capable of transforming furfural, whereas Methanobacterium thermoautotrophicum Marburg, Methanosarcina barkeri 227, Methanococcus thermolithotrophicus, and Methanobrevibacter ruminantium lacked this capability. One hundred percent removal of furfural was observed within 48 h of incubation in M. deltae cultures. The end product observed during furfural metabolism was furfuryl alcohol. An almost stoichiometric amount of furfuryl alcohol was produced by M. deltae. This transformation is likely to be of value in the detoxification of furfural and in its ultimate conversion to methane and CO(inf2) by anaerobic digestion. PMID:16535618

13.000 years of multicentennial variability in Nile discharge: The link between solar activity, Indian monsoon, and Sapropel S1 formation