Sample records for largest patch index

  1. Performance assessment of geospatial simulation models of land-use change--a landscape metric-based approach.

    PubMed

    Sakieh, Yousef; Salmanmahiny, Abdolrassoul

    2016-03-01

    Performance evaluation is a critical step when developing land-use and cover change (LUCC) models. The present study proposes a spatially explicit model performance evaluation method, adopting a landscape metric-based approach. To quantify GEOMOD model performance, a set of composition- and configuration-based landscape metrics including number of patches, edge density, mean Euclidean nearest neighbor distance, largest patch index, class area, landscape shape index, and splitting index were employed. The model takes advantage of three decision rules including neighborhood effect, persistence of change direction, and urbanization suitability values. According to the results, while class area, largest patch index, and splitting indices demonstrated insignificant differences between spatial pattern of ground truth and simulated layers, there was a considerable inconsistency between simulation results and real dataset in terms of the remaining metrics. Specifically, simulation outputs were simplistic and the model tended to underestimate number of developed patches by producing a more compact landscape. Landscape-metric-based performance evaluation produces more detailed information (compared to conventional indices such as the Kappa index and overall accuracy) on the model's behavior in replicating spatial heterogeneity features of a landscape such as frequency, fragmentation, isolation, and density. Finally, as the main characteristic of the proposed method, landscape metrics employ the maximum potential of observed and simulated layers for a performance evaluation procedure, provide a basis for more robust interpretation of a calibration process, and also deepen modeler insight into the main strengths and pitfalls of a specific land-use change model when simulating a spatiotemporal phenomenon.

  2. Evolution of Canada’s Boreal Forest Spatial Patterns as Seen from Space

    PubMed Central

    Pickell, Paul D.; Coops, Nicholas C.; Gergel, Sarah E.; Andison, David W.; Marshall, Peter L.

    2016-01-01

    Understanding the development of landscape patterns over broad spatial and temporal scales is a major contribution to ecological sciences and is a critical area of research for forested land management. Boreal forests represent an excellent case study for such research because these forests have undergone significant changes over recent decades. We analyzed the temporal trends of four widely-used landscape pattern indices for boreal forests of Canada: forest cover, largest forest patch index, forest edge density, and core (interior) forest cover. The indices were computed over landscape extents ranging from 5,000 ha (n = 18,185) to 50,000 ha (n = 1,662) and across nine major ecozones of Canada. We used 26 years of Landsat satellite imagery to derive annualized trends of the landscape pattern indices. The largest declines in forest cover, largest forest patch index, and core forest cover were observed in the Boreal Shield, Boreal Plain, and Boreal Cordillera ecozones. Forest edge density increased at all landscape extents for all ecozones. Rapidly changing landscapes, defined as the 90th percentile of forest cover change, were among the most forested initially and were characterized by four times greater decrease in largest forest patch index, three times greater increase in forest edge density, and four times greater decrease in core forest cover compared with all 50,000 ha landscapes. Moreover, approximately 18% of all 50,000 ha landscapes did not change due to a lack of disturbance. The pattern database results provide important context for forest management agencies committed to implementing ecosystem-based management strategies. PMID:27383055

  3. Evolution of Canada's Boreal Forest Spatial Patterns as Seen from Space.

    PubMed

    Pickell, Paul D; Coops, Nicholas C; Gergel, Sarah E; Andison, David W; Marshall, Peter L

    2016-01-01

    Understanding the development of landscape patterns over broad spatial and temporal scales is a major contribution to ecological sciences and is a critical area of research for forested land management. Boreal forests represent an excellent case study for such research because these forests have undergone significant changes over recent decades. We analyzed the temporal trends of four widely-used landscape pattern indices for boreal forests of Canada: forest cover, largest forest patch index, forest edge density, and core (interior) forest cover. The indices were computed over landscape extents ranging from 5,000 ha (n = 18,185) to 50,000 ha (n = 1,662) and across nine major ecozones of Canada. We used 26 years of Landsat satellite imagery to derive annualized trends of the landscape pattern indices. The largest declines in forest cover, largest forest patch index, and core forest cover were observed in the Boreal Shield, Boreal Plain, and Boreal Cordillera ecozones. Forest edge density increased at all landscape extents for all ecozones. Rapidly changing landscapes, defined as the 90th percentile of forest cover change, were among the most forested initially and were characterized by four times greater decrease in largest forest patch index, three times greater increase in forest edge density, and four times greater decrease in core forest cover compared with all 50,000 ha landscapes. Moreover, approximately 18% of all 50,000 ha landscapes did not change due to a lack of disturbance. The pattern database results provide important context for forest management agencies committed to implementing ecosystem-based management strategies.

  4. [Applicability of traditional landscape metrics in evaluating urban heat island effect].

    PubMed

    Chen, Ai-Lian; Sun, Ran-Hao; Chen, Li-Ding

    2012-08-01

    By using 24 landscape metrics, this paper evaluated the urban heat island effect in parts of Beijing downtown area. QuickBird (QB) images were used to extract the landscape type information, and the thermal bands from Landsat Enhanced Thematic Mapper Plus (ETM+) images were used to extract the land surface temperature (LST) in four seasons of the same year. The 24 landscape pattern metrics were calculated at landscape and class levels in a fixed window with 120 mx 120 m in size, with the applicability of these traditional landscape metrics in evaluating the urban heat island effect examined. Among the 24 landscape metrics, only the percentage composition of landscape (PLAND), patch density (PD), largest patch index (LPI), coefficient of Euclidean nearest-neighbor distance variance (ENN_CV), and landscape division index (DIVISION) at landscape level were significantly correlated with the LST in March, May, and November, and the PLAND, LPI, DIVISION, percentage of like adjacencies, and interspersion and juxtaposition index at class level showed significant correlations with the LST in March, May, July, and December, especially in July. Some metrics such as PD, edge density, clumpiness index, patch cohesion index, effective mesh size, splitting index, aggregation index, and normalized landscape shape index showed varying correlations with the LST at different class levels. The traditional landscape metrics could not be appropriate in evaluating the effects of river on LST, while some of the metrics could be useful in characterizing urban LST and analyzing the urban heat island effect, but screening and examining should be made on the metrics.

  5. Transitions in forest fragmentation: implications for restoration opportunities at regional scales

    Treesearch

    James D. Wickham; K. Bruce Jones; Kurt H. Riitters; Timothy G. Wade; Robert V. O' Neill

    1999-01-01

    Where the potential natural vegetation is continuous forest (e.g., eastern US), a region can be divided into smaller units (e.g., counties, watersheds), and a graph of the proportion of forest in the largest patch versus the proportion in anthropogenic cover can be used as an index of forest fragmentation. If forests are not fragmented beyond that converted to...

  6. Quantifying landscape pattern and connectivity in a Mediterranean coastal settlement: the case of the Urla district, Turkey.

    PubMed

    Coskun Hepcan, Cigdem

    2013-01-01

    This study was aimed at analyzing and interpreting changes in landscape pattern and connectivity in the Urla district, Turkey using core landscape metrics based on a 42-year data derived from 1963 CORONA and 2005 ASTER satellite images and ten 1/25,000 topographical maps (1963-2005). The district represents a distinctive example of re-emerged suburbanization in the Izmir metropolitan area. In order to explore landscape characteristics of the study area, nine landscape composition and configuration metrics were chosen as follows: class area, percentage of landscape, number of patches, patch density, largest patch index, landscape shape index, mean patch size, perimeter area fractal dimension, and connectance index. The landscape configurations in the Urla district changed significantly by 2005 in that the process of (sub-)urbanization in the study area evolved from a rural, monocentric urban typology to a more suburban, polycentric morphology. Agricultural, maquis-phrygana, and forest areas decreased, while the built-up, olive plantation and phrygana areas increased. There was nearly a fivefold increase in the built-up areas during the study period, and the connectivity of the natural landscape declined. To prevent further fragmentation, it is important to keep the existing natural land cover types and agricultural areas intact. More importantly, a sustainable development scenario is required that contains a green infrastructure, or an ecological network planning for conservation and rehabilitation of the vital natural resources in the study area.

  7. Computer program documentation for the patch subsampling processor

    NASA Technical Reports Server (NTRS)

    Nieves, M. J.; Obrien, S. O.; Oney, J. K. (Principal Investigator)

    1981-01-01

    The programs presented are intended to provide a way to extract a sample from a full-frame scene and summarize it in a useful way. The sample in each case was chosen to fill a 512-by-512 pixel (sample-by-line) image since this is the largest image that can be displayed on the Integrated Multivariant Data Analysis and Classification System. This sample size provides one megabyte of data for manipulation and storage and contains about 3% of the full-frame data. A patch image processor computes means for 256 32-by-32 pixel squares which constitute the 512-by-512 pixel image. Thus, 256 measurements are available for 8 vegetation indexes over a 100-mile square.

  8. Testing the role of patch openness as a causal mechanism for apparent area sensitivity in a grassland specialist.

    PubMed

    Keyel, Alexander C; Bauer, Carolyn M; Lattin, Christine R; Romero, L Michael; Reed, J Michael

    2012-06-01

    Area sensitivity, species being disproportionately present on larger habitat patches, has been identified in many taxa. We propose that some apparently area-sensitive species are actually responding to how open a habitat patch is, rather than to patch size. We tested this hypothesis for Bobolinks (Dolichonyx oryzivorus) by comparing density and occupancy to a novel openness index, patch area, and edge effects. Bobolink density and occupancy showed significant relationships with openness, but logistic models based on an openness occupancy threshold had greater explanatory power. Thresholds remained approximately consistent from June through August, and shifted to be more open in September. Variance partitioning supported the openness index as unique and relevant. We found no relationships between measures of body condition (body mass, body size, circulating corticosterone levels) and either openness or area. Our findings have implications for studies of area sensitivity, especially with regards to inconsistencies reported within species: specifically, (1) whether or not a study finds a species to be area sensitive may depend on whether small, open sites were sampled, and (2) area regressions were sensitive to observed densities at the largest sites, suggesting that variation in these fields could lead to inconsistent area sensitivity responses. Responses to openness may be a consequence of habitat selection mediated by predator effects. Finally, openness measures may have applications for predicting effects of habitat management or development, such as adding wind turbines, in open habitat.

  9. Wetlands shrinkage, fragmentation and their links to agriculture in the Muleng-Xingkai Plain, China.

    PubMed

    Song, Kaishan; Wang, Zongming; Li, Lin; Tedesco, Lenore; Li, Fang; Jin, Cui; Du, Jia

    2012-11-30

    In the past five decades, the wetlands in the Muleng-Xingkai Plain, Northeast China, have experienced rapid shrinkage and fragmentation. In this study, wetlands cover change and agricultural cultivation were investigated through a time series of thematic maps from 1954, and Landsat satellite images representing the last five decades (1976, 1986, 1995, 2000, and 2005). Wetlands shrinkage and fragmentation were studied based on landscape metrics and the land use changes transition matrix. Furthermore, the driving forces were explored according to socioeconomic development and major natural environmental factors. The results indicate a significant decrease in the wetlands area in the past five decades, with an average annual decrease rate of 9004 ha/yr. Of the 625,268 ha of native wetlands in 1954, approximately 64% has been converted to other land use types by 2005, of which conversion to cropland accounts for the largest share (83%). The number of patches decreased from 1272 (1954) to 197 (1986) and subsequently increased to 326 (2005). The mean patch size changed from 480 ha (1954) to 1521 ha (1976), and then steadily decreased to 574 ha (2005). The largest patch index (total core area index) indicates wetlands shrinkage with decreased values from 31.73 (177,935 ha) to 3.45 (39,421 ha) respectively. Climatic changes occurred over the study period, providing a potentially favorable environment for agricultural development. At the same time population, groundwater harvesting, and fertilizer application increased significantly, resulting in wetlands degradation. According to the results, the shrinkage and fragmentation of wetlands could be explained by socioeconomic development and secondarily aided by changing climatic conditions. Copyright © 2012 Elsevier Ltd. All rights reserved.

  10. Patch Finder Plus (PFplus): a web server for extracting and displaying positive electrostatic patches on protein surfaces.

    PubMed

    Shazman, Shula; Celniker, Gershon; Haber, Omer; Glaser, Fabian; Mandel-Gutfreund, Yael

    2007-07-01

    Positively charged electrostatic patches on protein surfaces are usually indicative of nucleic acid binding interfaces. Interestingly, many proteins which are not involved in nucleic acid binding possess large positive patches on their surface as well. In some cases, the positive patches on the protein are related to other functional properties of the protein family. PatchFinderPlus (PFplus) http://pfp.technion.ac.il is a web-based tool for extracting and displaying continuous electrostatic positive patches on protein surfaces. The input required for PFplus is either a four letter PDB code or a protein coordinate file in PDB format, provided by the user. PFplus computes the continuum electrostatics potential and extracts the largest positive patch for each protein chain in the PDB file. The server provides an output file in PDB format including a list of the patch residues. In addition, the largest positive patch is displayed on the server by a graphical viewer (Jmol), using a simple color coding.

  11. Patch Finder Plus (PFplus): A web server for extracting and displaying positive electrostatic patches on protein surfaces

    PubMed Central

    Shazman, Shula; Celniker, Gershon; Haber, Omer; Glaser, Fabian; Mandel-Gutfreund, Yael

    2007-01-01

    Positively charged electrostatic patches on protein surfaces are usually indicative of nucleic acid binding interfaces. Interestingly, many proteins which are not involved in nucleic acid binding possess large positive patches on their surface as well. In some cases, the positive patches on the protein are related to other functional properties of the protein family. PatchFinderPlus (PFplus) http://pfp.technion.ac.il is a web-based tool for extracting and displaying continuous electrostatic positive patches on protein surfaces. The input required for PFplus is either a four letter PDB code or a protein coordinate file in PDB format, provided by the user. PFplus computes the continuum electrostatics potential and extracts the largest positive patch for each protein chain in the PDB file. The server provides an output file in PDB format including a list of the patch residues. In addition, the largest positive patch is displayed on the server by a graphical viewer (Jmol), using a simple color coding. PMID:17537808

  12. Closure technique after carotid endarterectomy influences local hemodynamics.

    PubMed

    Harrison, Gareth J; How, Thien V; Poole, Robert J; Brennan, John A; Naik, Jagjeeth B; Vallabhaneni, S Rao; Fisher, Robert K

    2014-08-01

    Meta-analysis supports patch angioplasty after carotid endarterectomy (CEA); however, studies indicate considerable variation in practice. The hemodynamic effect of a patch is unclear and this study attempted to elucidate this and guide patch width selection. Four groups were selected: healthy volunteers and patients undergoing CEA with primary closure, trimmed patch (5 mm), or 8-mm patch angioplasty. Computer-generated three-dimensional models of carotid bifurcations were produced from transverse ultrasound images recorded at 1-mm intervals. Rapid prototyping generated models for flow visualization studies. Computational fluid dynamic studies were performed for each model and validated by flow visualization. Mean wall shear stress (WSS) and oscillatory shear index (OSI) maps were created for each model using pulsatile inflow at 300 mL/min. WSS of <0.4 Pa and OSI >0.3 were considered pathological, predisposing to accretion of intimal hyperplasia. The resultant WSS and OSI maps were compared. The four groups comprised 8 normal carotid arteries, 6 primary closures, 6 trimmed patches, and seven 8-mm patches. Flow visualization identified flow separation and recirculation at the bifurcation increased with a patch and was related to the patch width. Computational fluid dynamic identified that primary closure had the fewest areas of low WSS or elevated OSI but did have mild common carotid artery stenoses at the proximal arteriotomy that caused turbulence. Trimmed patches had more regions of abnormal WSS and OSI at the bifurcation, but 8-mm patches had the largest areas of deleteriously low WSS and high OSI. Qualitative comparison among the four groups confirmed that incorporation of a patch increased areas of low WSS and high OSI at the bifurcation and that this was related to patch width. Closure technique after CEA influences the hemodynamic profile. Patching does not appear to generate favorable flow dynamics. However, a trimmed 5-mm patch may offer hemodynamic benefits over an 8-mm patch and may be the preferred option. Copyright © 2014 Society for Vascular Surgery. Published by Mosby, Inc. All rights reserved.

  13. [Changes of wetland landscape pattern in Dayang River Estuary based on high-resolution remote sensing image].

    PubMed

    Wu, Tao; Zhao, Dong-zhi; Zhang, Feng-shou; Wei, Bao-quan

    2011-07-01

    Based on the comprehensive consideration of the high resolution characteristics of remote sensing data and the current situation of land cover and land use in Dayang River Estuary wetland, a classification system with different resolutions of wetland landscape in the Estuary was established. The landscape pattern indices and landscape transition matrix were calculated by using the high resolution remote sensing data, and the dynamic changes of the landscape pattern from 1984 to 2008 were analyzed. In the study period, the wetland landscape components changed drastically. Wetland landscape transferred from natural wetland into artificial wetland, and wetland core regional area decreased. Natural wetland's largest patch area index descended, and the fragmentation degree ascended; while artificial wetland area expanded, its patch number decreased, polymerization degree increased, and the maximum patch area index had an obvious increasing trend. Increasing human activities, embankment construction, and reclamation for aquaculture were the main causes for the decrease of wetland area and the degradation of the ecological functions of Dayang River Estuary. To constitute long-term scientific and reasonable development plan, establish wetland nature reserves, protect riverway, draft strict inspective regimes for aquaculture reclamation, and energetically develop resource-based tourism industry would be the main strategies for the protection of the estuarine wetland.

  14. Using an index of habitat patch proximity for landscape design

    Treesearch

    Eric J. Gustafson; George R. Parker

    1994-01-01

    A proximity index (PX) inspired by island biogeography theory is described which quantifies the spatial context of a habitat patch in relation to its neighbors. The index distinguishes sparse distributions of small habitat patches from clusters of large patches. An evaluation of the relationship between PX and variation in the spatial characteristics of clusters of...

  15. Urban Landscape Spatial Pattern Estimation of Cities in Shandong Province Using Nighttime Luminosity Data

    NASA Astrophysics Data System (ADS)

    Fan, J.; He, H.; Hu, T.; Li, G.; Gao, H.; Zhao, X.

    2017-09-01

    China's cities have been undergoing rapid and intense urbanization processes in the past few decades. Shandong is a coastal province which is located in East China with big economy and population scales, and which also plays an important role in the rapid process of China's modernization. The DMSP/OLS dataset has been widely used for the urban development assessments in long time-series and large spatial scales situations. In this paper, we used a time series of nighttime light data to estimate the landscape spatial pattern changes of cities in Shandong province from 1994 to 2012. Nine landscape metrics were calculated and analyzed to figure out the spatial patterns of urban area developments of the cities in Shandong province. The landscape metrics include the number of patches (NP), the landscape total area (TA), the aggregation index (AI), the largest patch index (LPI), the mean patch area (AREA_MN), the landscape shape index (LSI), the total edge length (TE), the edge density (ED), and the mean radius of gyration (GYRATE_MN). The experimental results reveal that, in 1994-2012, the total urban area of cities in Shandong province expanded for 1.17 times, the average urban area increased by about 93.00%, the average annual growth rate of the TE metric is 2.67 %, while the ED metric decreased about 1.44 % annually. Bigger cities in this area show relative slower urbanization development processes, such as Jinan and Qingdao. Coastal cities represented much more rapid expansion velocities than inland cities. In the middle area of Shandong province, the connectivity between developed urban areas was constantly increased.

  16. Human access and landscape structure effects on Andean forest bird richness

    NASA Astrophysics Data System (ADS)

    Aubad, Jorge; Aragón, Pedro; Rodríguez, Miguel Á.

    2010-07-01

    We analyzed the influence of human access and landscape structure on forest bird species richness in a fragmented landscape of the Colombian Andes. In Latin America, habitat loss and fragmentation are considered as the greatest threats to biodiversity because a large number of countryside villagers complement their food and incomes with the extraction of forest resources. Anthropogenic actions may also affect forest species by bird hunting or indirectly through modifying the structure of forest habitats. We surveyed 14 secondary cloud forest remnants to generate bird species richness data for each of them. We also quantified six landscape structure descriptors of forest patch size (patch area and core area), shape (perimeter of each fragment and the Patton's shape index) and isolation (nearest neighbor distance and edge contrast), and generated (using principal components analysis) a synthetic human influence variable based on the distance of each fragment to roads and villages, as well as the total slope of the fragments. Species richness was related to these variables using generalized linear models (GLMs) complemented with model selection techniques based on information theory and partial regression analysis. We found that forest patch size and accessibility were key drivers of bird richness, which increased toward largest patches, but decreased in those more accessible to humans and their potential disturbances. Both patch area and human access effects on forest bird species richness were complementary and similar in magnitude. Our results provide a basis for biodiversity conservation plans and initiatives of Andean forest diversity.

  17. Quantifying forest vertical structure to determine bird habitat quality in the Greenbelt Corridor, Denton, TX

    NASA Astrophysics Data System (ADS)

    Matsubayashi, Shiho

    This study presents the integration of light detection and range (LiDAR) and hyperspectral remote sensing to create a three-dimensional bird habitat map in the Greenbelt Corridor of the Elm Fork of the Trinity River. This map permits to examine the relationship between forest stand structure, landscape heterogeneity, and bird community composition. A biannual bird census was conducted at this site during the breeding seasons of 2009 and 2010. Census data combined with the three-dimensional map suggest that local breeding bird abundance, community structure, and spatial distribution patterns are highly influenced by vertical heterogeneity of vegetation surface. For local breeding birds, vertical heterogeneity of canopy surface within stands, connectivity to adjacent forest patches, largest forest patch index, and habitat (vegetation) types proved to be the most influential factors to determine bird community assemblages. Results also highlight the critical role of secondary forests to increase functional connectivity of forest patches. Overall, three-dimensional habitat descriptions derived from integrated LiDAR and hyperspectral data serve as a powerful bird conservation tool that shows how the distribution of bird species relates to forest composition and structure at various scales.

  18. Multisclae heterogeneity of the 2011 Tohoku-oki earthquake by inversion

    NASA Astrophysics Data System (ADS)

    Aochi, H.; Ulrich, T.; Cornier, G.

    2012-12-01

    Earthquake fault heterogeneity is often studied on a set of subfaults in kinematic inversion, while it is sometimes described with spatially localized geometry. Aochi and Ide (EPS, 2011) and Ide and Aochi (submitted to Pageoph and AGU, 2012) apply a concept of multi-scale heterogeneity to simulate the dynamic rupture process of the 2011 Tohoku-oki earthquake, introducing circular patches of different dimension in fault fracture energy distribution. Previously the patches are given by the past moderate earthquakes in this region, and this seems to be consistent with the evolution process of this mega earthquake, although a few patches, in particular, the largest patch, had not been known previously. In this study, we try to identify patches by inversion. As demonstrated in several earthquakes including the 2010 Maule (M8.8) earthquake, it is possible to indentify two asperities of ellipse kinematically or dynamically (e.g. Ruiz and Madariaga, 2011, and so on). In the successful examples, different asperities are rather visible, separated in space. However the Tohoku-oki earthquake has hierarchical structure of heterogeneity. We apply the Genetic Algorithm to inverse the model parameters from the ground motions (K-net and Kik-net from NIED) and the high sampling GPS (GSI). Starting from low frequency ranges (> 50 seconds), we obtain an ellipse corresponding to M9 event located around the hypocenter, coherent with the previous result by Madariaga et al. (pers. comm.). However it is difficult to identify the second smaller with few constraints. This is mainly because the largest covers the entire rupture area and any smaller patch improves the fitting only for the closer stations. Again, this needs to introduce the multi-scale concept in inversion procedure. Instead of finding the largest one at first, we have to start to extract rather smaller moderate patches from the beginning of the record, following the rupture process.

  19. Correlation between landscape fragmentation and sandy desertification: a case study in Horqin Sandy Land, China.

    PubMed

    Ge, Xiaodong; Dong, Kaikai; Luloff, A E; Wang, Luyao; Xiao, Jun; Wang, Shiying; Wang, Qian

    2016-01-01

    The exact roles of landscape fragmentation on sandy desertification are still not fully understood, especially with the impact of different land use types in spatial dimension. Taking patch size and shape into consideration, this paper selected the Ratio of Patch Size and the Fractal Dimension Index to establish a model that reveals the association between the area of bare sand land and the fragmentation of different land use types adjacent to bare sand land. Results indicated that (1) grass land and arable land contributed the most to landscape fragmentation processes in the regions adjacent to bare sand land during the period 1980 to 2010. Grass land occupied 54 % of the region adjacent to bare sand land in 1980. The Ratio of Patch Size of grass land decreased from 1980 to 2000 and increased after 2000. The Fractal Dimension Index of grass increased during the period 1980 to 1990 and decreased after 1990. Arable land expanded significantly during this period. The Ratio of Patch Size of arable land increased from 1980 to 1990 and decreased since 1990. The Fractal Dimension Index of arable land increased from 1990 to 2000 and decreased after 2000. (2) The Ratio of Patch Size and the Fractal Dimension Index were significantly related to the area of bare sand land. The role of landscape fragmentation was not linear to sandy desertification. There were both positive and negative effects of landscape fragmentation on sandy desertification. In 1980, the Ratio of Patch Size and the Fractal Dimension Index were negatively related to the area of bare sand land, showing that the landscape fragmentation and regularity of patches contributed to the expansion of sandy desertification. In 1990, 2000, and 2010, the Ratio of Patch Size and the Fractal Dimension Index were mostly positively related to the area of bare sand land, showing the landscape fragmentation and regularity of patches contributed to the reversion of sandy desertification in this phase. The absolute values of the coefficients were the highest for grass land in the regression models, so that grass land had the most important influence on sandy desertification.

  20. [Applications of 2D and 3D landscape pattern indices in landscape pattern analysis of mountainous area at county level].

    PubMed

    Lu, Chao; Qi, Wei; Li, Le; Sun, Yao; Qin, Tian-Tian; Wang, Na-Na

    2012-05-01

    Landscape pattern indices are the commonly used tools for the quantitative analysis of landscape pattern. However, the traditional 2D landscape pattern indices neglect the effects of terrain on landscape, existing definite limitations in quantitatively describing the landscape patterns in mountains areas. Taking the Qixia City, a typical mountainous and hilly region in Shandong Province of East China, as a case, this paper compared the differences between 2D and 3D landscape pattern indices in quantitatively describing the landscape patterns and their dynamic changes in mountainous areas. On the basis of terrain structure analysis, a set of landscape pattern indices were selected, including area and density (class area and mean patch size), edge and shape (edge density, landscape shape index, and fractal dimension of mean patch), diversity (Shannon's diversity index and evenness index) , and gathering and spread (contagion index). There existed obvious differences between the 3D class area, mean patch area, and edge density and the corresponding 2D indices, but no significant differences between the 3D landscape shape index, fractal dimension of mean patch, and Shannon' s diversity index and evenness index and the corresponding 2D indices. The 3D contagion index and 2D contagion index had no difference. Because the 3D landscape pattern indices were calculated by using patch surface area and surface perimeter whereas the 2D landscape pattern indices were calculated by adopting patch projective area and projective perimeter, the 3D landscape pattern indices could be relative accurate and efficient in describing the landscape area, density and borderline, in mountainous areas. However, there were no distinct differences in describing landscape shape, diversity, and gathering and spread between the 3D and 2D landscape pattern indices. Generally, by introducing 3D landscape pattern indices to topographic pattern, the description of landscape pattern and its dynamic change would be relatively accurate.

  1. [Spatial scale effect of land use landscape pattern in Yongdeng County, Gansu Province, China.

    PubMed

    Liu, Yuan Yuan; Liu, Xue Lu

    2016-04-22

    Based on "patch-corridor-matrix" pattern, spatial scale effect of landscape pattern was studied in Yongdeng County of Lanzhou City, Gansu Province, China. The results showed that the grassland was the matrix of landscape structure in the studied area, road and river played the corridor role, and the other landscape elements (cultivated land, forest land, garden land, residential land, industrial and mineral land, public management and service land, and the other land) acted as patches. The patch level index and the landscape level index all showed obvious dependence on spatial extent. The scale effect of patch index of different landscape elements existed differently in different extent intervals, so did the scale effect of the landscape level index. Within the extent of 1-20 km, the scale effect showed the most obvious difference between the element types and the index types, while it became smaller in 21-90 km, and disappeared beyond 90 km. 90 km×90 km might be the effective extent to study the dependence of spatial extent of landscape structure.

  2. [Relationships between landscape structure and rocky desertification in karst region of northwestern Guangxi].

    PubMed

    Zhang, Xiao-nan; Wang, Ke-lin; Chen, Hong-song; Zhang, Wei

    2008-11-01

    By using canonical correspondence analysis (CCA), sixteen landscape indices were adopted to quantitatively analyze the relationships between the landscape structure and rocky desertification in karst region of Huanjiang County, Guangxi Province. The results showed that the first and the second ordination axis of CCA were strongly correlated to the factors of average patch area, average dry land patch area, landscape shape index, and landscape aggregation index. The potential rocky desertification in the region was highly positively correlated with the average dry land patch area and the average fractal dimensions of dry land and shrub land, but negatively correlated with the patch numbers of dry land. Light rocky desertification had obvious positive correlations with the fractal dimension index, average fractal dimension of unused land, and patch numbers of shrub land; while moderate and strong rocky desertification had high positive correlations with the average unused land patch area but negative correlation with the average fractal dimension of shrub land. To some extent, rocky desertification degree might be represented by the values of landscape indices. The gradient variation in karst rocky desertification along landscape structure was clearly presented by the results of CCA.

  3. Thirty Years of Change in Subalpine Forest Cover from Landsat Image Analysis in the Sierra Nevada Mountains of California

    NASA Technical Reports Server (NTRS)

    Potter, Christopher

    2015-01-01

    Landsat imagery was analyzed to understand changes in subalpine forest stands since the mid-1980s in the Sierra-Nevada region of California. At locations where long-term plot measurements have shown that stands are becoming denser in the number of small tree stems (compared to the early 1930s), the 30-year analysis of Landsat greenness index (NDVI) indicated that no consistent increases in canopy leaf cover have occurred at these same locations since the mid-1980s. Interannual variations in stand NDVI closely followed snow accumulation amounts recorded at nearby stations. In contrast, at eastern Sierra whitebark pine stand locations where it has been observed that widespread tree mortality has occurred, decreasing NDVI trends over the past 5-10 years were consistent with rapid loss of forest canopy cover. Landsat imagery was further analyzed to understand patterns of post-wildfire vegetation recovery, focusing on high burn severity (HBS) patches within burned areas dating from the late 1940s. Analysis of landscape metrics showed that the percentage of total HBS area comprised by the largest patch of recovered woody cover was relatively small in all fires that occurred since 1995, but increased rapidly with time since fire. Patch complexity of recovered woody cover decreased notably after more than 50 years of regrowth, but was not readily associated with time for fires that occurred since the mid 1990s. The aggregation level of patches with recovery of woody cover increased steadily with time since fire. The study approach using satellite remote sensing can be expanded to assess the consequences of stand-replacing wildfires in all forests of the region.

  4. Measuring forest landscape patterns in the Cascade Range of Oregon, USA

    NASA Technical Reports Server (NTRS)

    Ripple, William J.; Bradshaw, G. A.; Spies, Thomas A.

    1995-01-01

    This paper describes the use of a set of spatial statistics to quantify the landscape pattern caused by the patchwork of clearcuts made over a 15-year period in the western Cascades of Oregon. Fifteen areas were selected at random to represent a diversity of landscape fragmentation patterns. Managed forest stands (patches) were digitized and analyzed to produce both tabular and mapped information describing patch size, shape, abundance and spacing, and matrix characteristics of a given area. In addition, a GIS fragmentation index was developed which was found to be sensitive to patch abundance and to the spatial distribution of patches. Use of the GIS-derived index provides an automated method of determining the level of forest fragmentation and can be used to facilitate spatial analysis of the landscape for later coordination with field and remotely sensed data. A comparison of the spatial statistics calculated for the two years indicates an increase in forest fragmentation as characterized by an increase in mean patch abundance and a decrease in interpatch distance, amount of interior natural forest habitat, and the GIS fragmentation index. Such statistics capable of quantifying patch shape and spatial distribution may prove important in the evaluation of the changing character of interior and edge habitats for wildlife.

  5. Multi-scale factors influencing the characteristics of avian communities in urban parks across Beijing during the breeding season

    NASA Astrophysics Data System (ADS)

    Xie, Shilin; Lu, Fei; Cao, Lei; Zhou, Weiqi; Ouyang, Zhiyun

    2016-07-01

    Understanding the factors that influence the characteristics of avian communities using urban parks at both the patch and landscape level is important to focus management effort towards enhancing bird diversity. Here, we investigated this issue during the breeding season across urban parks in Beijing, China, using high-resolution satellite imagery. Fifty-two bird species were recorded across 29 parks. Analysis of residence type of birds showed that passengers were the most prevalent (37%), indicating that Beijing is a major node in the East Asian-Australasian Flyway. Park size was crucial for total species abundance, but foliage height diversity was the most important factor influencing avian species diversity. Thus, optimizing the configuration of vertical vegetation structure in certain park areas is critical for supporting avian communities in urban parks. Human visitation also showed negative impact on species diversity. At the landscape level, the percentage of artificial surface and largest patch index of woodland in the buffer region significantly affected total species richness, with insectivores and granivores being more sensitive to the landscape pattern of the buffer region. In conclusion, urban birds in Beijing are influenced by various multi-scale factors; however, these effects vary with different feeding types.

  6. Multi-scale factors influencing the characteristics of avian communities in urban parks across Beijing during the breeding season.

    PubMed

    Xie, Shilin; Lu, Fei; Cao, Lei; Zhou, Weiqi; Ouyang, Zhiyun

    2016-07-11

    Understanding the factors that influence the characteristics of avian communities using urban parks at both the patch and landscape level is important to focus management effort towards enhancing bird diversity. Here, we investigated this issue during the breeding season across urban parks in Beijing, China, using high-resolution satellite imagery. Fifty-two bird species were recorded across 29 parks. Analysis of residence type of birds showed that passengers were the most prevalent (37%), indicating that Beijing is a major node in the East Asian-Australasian Flyway. Park size was crucial for total species abundance, but foliage height diversity was the most important factor influencing avian species diversity. Thus, optimizing the configuration of vertical vegetation structure in certain park areas is critical for supporting avian communities in urban parks. Human visitation also showed negative impact on species diversity. At the landscape level, the percentage of artificial surface and largest patch index of woodland in the buffer region significantly affected total species richness, with insectivores and granivores being more sensitive to the landscape pattern of the buffer region. In conclusion, urban birds in Beijing are influenced by various multi-scale factors; however, these effects vary with different feeding types.

  7. An Analysis Framework Using Satellite Remote Sensing to Understand Landscape Patterns of High Severity Burns from Wildfires in Coastal Woodlands of California and Italy

    NASA Astrophysics Data System (ADS)

    Potter, C. S.

    2016-12-01

    The central California coastal landscape has a history of frequent large wildfires that have threatened or destroyed many residential structures at the wildland interface. This study starts with the largest wildfires on the Central Coast over the past 30 years and analyzes the fraction and landscape patterns of high severity burned (HBS) areas from the Landsat-based Monitoring Trends in Burn Severity (MTBS) data base as a function of weather conditions and topographic variations. Results indicate that maximum temperatures at the time of fire and the previous 12 months of rainfall explained a significant portion of the variation in total area burned and the fraction of HBS area. Average patch size and aggregation metrics of HBS areas were included in the analysis framework. Within each burned area, the Landsat (30-meter resolution) differenced Normalized Burn Ratio (dNBR), a continuous index of vegetation burn severity, was correlated against slope, aspect, and elevation to better understand landscape level-controls over HBS patches. The Landsat dNBR analysis framework is being extended next to the island of Sardinia, Italy for a comparison of Mediterranean climates and wildfire patterns since the mid-1980s.

  8. Relative abundance of mesopredators and size of oak patches in the cross-timbers ecoregion

    USGS Publications Warehouse

    Disney, M.R.; Hellgren, E.C.; Davis, C.A.; Leslie, David M.; Engle, David M.

    2008-01-01

    Mesopredators (e.g., raccoon Procyon lotor, Virginia opossum Didelphis virginiana, striped skunk Mephitis mephitis) have received considerable attention because of links to population declines in birds via increased nest predation, especially in landscapes fragmented by anthropogenic forces. Relationships of abundance of mesopredators to size of habitat patches have received less attention than relationships to other metrics of fragmentation, particularly edge characteristics. We tested the hypothesis that relative abundance of mesopredators (e.g., raccoons and Virginia opossums) was related negatively to size of forest patch. We delineated 15 patches of oak (Quercus) forest ranging from 0.2 to 55.3 ha within a grassland-woodland mosaic in the cross-timbers ecoregion of Oklahoma. Scent stations and live traps within these patches were used to index relative abundance of mesopredators in summers 2003 and 2004. Both indices of relative abundance were related weakly and negatively to area of forest patch. However, rate of capture and visitation to scent station were not correlated consistently throughout the study. Our results suggested that the two methods to index abundance provided separate information on functional and numerical responses to size of patch. Our evidence that mesopredators within the cross timbers were more likely to be in smaller patches of oak forest may have implications to success of avian nesting in these patches.

  9. On the Persistent Shape and Coherence of Pulsating Auroral Patches

    NASA Astrophysics Data System (ADS)

    Humberset, B. K.; Gjerloev, J. W.; Mann, I. R.; Michell, R. G.; Samara, M.

    2018-05-01

    The pulsating aurora covers a broad range of fluctuating shapes that are poorly characterized. The purpose of this paper is therefore to provide objective and quantitative measures of the extent to which pulsating auroral patches maintain their shape, drift and fluctuate in a coherent fashion. We present results from a careful analysis of pulsating auroral patches using all-sky cameras. We have identified four well-defined individual patches that we follow in the patch frame of reference. In this way we avoid the space-time ambiguity which complicates rocket and satellite measurements. We find that the shape of the patches is remarkably persistent with 85-100% of the patch being repeated for 4.5-8.5 min. Each of the three largest patches has a temporal correlation with a negative dependence on distance, and thus does not fluctuate in a coherent fashion. A time-delayed response within the patches indicates that the so-called streaming mode might explain the incoherency. The patches appear to drift differently from the SuperDARN-determined E→×B→ convection velocity. However, in a nonrotating reference frame the patches drift with 230-287 m/s in a north eastward direction, which is what typically could be expected for the convection return flow.

  10. Enviromentally sensitive patch index of desertification risk applied to the main habitats of Sicily

    NASA Astrophysics Data System (ADS)

    Duro, A.; Piccione, V.; Ragusa, M. A.; Rapicavoli, V.; Veneziano, V.

    2017-07-01

    The authors applied the MEDALUS - Mediterranean Desertification and Land Use - procedure to the most representative sicilian habitat by extension, socio-economic and environmental importance, in order to assess the risk of desertification. Thanks to the ESPI, Environmentally Sensitive Patch Index, in this paper the authors estimate the current and future regional levels of desertification risk.

  11. Patch tests with fragrance materials and preservatives.

    PubMed

    de Groot, A C; Liem, D H; Nater, J P; van Ketel, W G

    1985-02-01

    179 patients suspected of cosmetic allergy were patch tested with a series of 16 fragrance materials and 9 preservatives. In 67 patients (37.4%), 1 or more of these substances gave positive reactions. In the group of fragrance materials, the largest numbers of positive patch test reactions were seen to isoeugenol, oak moss, geraniol, alpha-amylcinnamic alcohol, and a mixture of alpha-amylcinnamic aldehyde and alpha-hexylcinnamic aldehyde. The fragrance mix in the ICDRG standard series detected nearly 80% of cases of contact allergy to fragrance materials other than its constituents. In the group of preservatives, Kathon CG and quaternium-15 scored the highest number of positive reactions. It is argued that the commonly used patch test concentrations of 2% for oak moss and geraniol may be too low to detect all cases of sensitization.

  12. Effects of landscape change on fish assemblage structure in a rapidly growing metropolitan area in North Carolina, USA

    USGS Publications Warehouse

    Kennen, J.G.; Chang, M.; Tracy, B.H.

    2005-01-01

    We evaluated a comprehensive set of natural and land-use attributes that represent the major facets of urban development at fish monitoring sites in the rapidly growing Raleigh-Durham, North Carolina metropolitan area. We used principal component and correlation analysis to obtain a nonredundant subset of variables that extracted most variation in the complete set. With this subset of variables, we assessed the effect of urban growth on fish assemblage structure. We evaluated variation in fish assemblage structure with nonmetric multidimensional scaling (NMDS). We used correlation analysis to identify the most important environmental and landscape variables associated with significant NMDS axes. The second NMDS axis is related to many indices of land-use/land-cover change and habitat. Significant correlations with proportion of largest forest patch to total patch size (r = -0.460, P < 0.01), diversity of patch types (r = 0.554, P < 0.001), and population density (r = 0.385, P < 0.05) helped identify NMDS axis 2 as a disturbance gradient. Positive and negative correlations between the abundance of redbreast sunfish Lepomis auritus and bluehead chub Nocomis leptocephalus, respectively, and NMDS axis 2 also were evident. The North Carolina index of biotic integrity and many of its component metrics were highly correlated with urbanization. These results indicate that aquatic ecosystem integrity would be optimized by a comprehensive integrated management strategy that includes the preservation of landscape function by maximizing the conservation of contiguous tracts of forested lands and vegetative cover in watersheds. ?? 2005 by the American Fisheries Society.

  13. Multi-scale factors influencing the characteristics of avian communities in urban parks across Beijing during the breeding season

    PubMed Central

    Xie, Shilin; Lu, Fei; Cao, Lei; Zhou, Weiqi; Ouyang, Zhiyun

    2016-01-01

    Understanding the factors that influence the characteristics of avian communities using urban parks at both the patch and landscape level is important to focus management effort towards enhancing bird diversity. Here, we investigated this issue during the breeding season across urban parks in Beijing, China, using high-resolution satellite imagery. Fifty-two bird species were recorded across 29 parks. Analysis of residence type of birds showed that passengers were the most prevalent (37%), indicating that Beijing is a major node in the East Asian–Australasian Flyway. Park size was crucial for total species abundance, but foliage height diversity was the most important factor influencing avian species diversity. Thus, optimizing the configuration of vertical vegetation structure in certain park areas is critical for supporting avian communities in urban parks. Human visitation also showed negative impact on species diversity. At the landscape level, the percentage of artificial surface and largest patch index of woodland in the buffer region significantly affected total species richness, with insectivores and granivores being more sensitive to the landscape pattern of the buffer region. In conclusion, urban birds in Beijing are influenced by various multi-scale factors; however, these effects vary with different feeding types. PMID:27404279

  14. Low-dose levonorgestrel and ethinyl estradiol patch and pill: a randomized controlled trial.

    PubMed

    Kaunitz, Andrew M; Portman, David; Westhoff, Carolyn L; Archer, David F; Mishell, Daniel R; Rubin, Arkady; Foegh, Marie

    2014-02-01

    To compare a new low-dose levonorgestrel and ethinyl estradiol contraceptive patch (Patch) with a combination oral contraceptive (Pill; 100 micrograms levonorgestrel, 20 micrograms ethinyl estradiol) regarding efficacy, safety, compliance, and unscheduled uterine bleeding. Women (17-40 years; body mass index 16-60) were randomized in a 3:1 ratio to one of two groups: Patch only (13 cycles) or Pill (six cycles) followed by Patch (seven cycles). Investigators evaluated adverse events during cycles 2, 4, 6, 9, and 13. Participants recorded drug administration and uterine bleeding on daily diary cards. Compliance was assessed by measuring levonorgestrel and ethinyl estradiol plasma levels. Pearl Index (pregnancies per 100 woman-years) was calculated to evaluate efficacy. Participants (N=1,504) were randomized to Patch (n=1,129) or Pill (n=375). Approximately 30% were obese, more than 40% were racial or ethnic minorities, and more than 55% were new users of hormonal contraceptives. Laboratory-verified noncompliance (undetectable plasma drug levels) was 11% of Patch and 12.6% of Pill users at cycle 6. Pearl Indices (95% confidence intervals) for the intention-to-treat population (cycles 1-6) were 4.45 (2.34-6.57) for Patch and 4.02 (0.50-7.53) for Pill; excluding laboratory-verified noncompliant participants, Pearl Indices were 2.82 (0.98-4.67) for Patch and 3.80 (0.08-7.52) for Pill (differences not statistically significant). Incidence of unscheduled bleeding and incidence and severity of adverse events were similar for both contraceptives (no statistically significant difference). Efficacy and safety of the new contraceptive Patch are comparable to those of a Pill. Laboratory-verified noncompliance and bleeding profile are similar between the two treatments. The Patch was well tolerated. ClinicalTrials.gov, www.clinicaltrials.gov, NCT01181479. I.

  15. Comparison between over-glasses patching and adhesive patching for children with moderate amblyopia: a prospective randomized clinical trial.

    PubMed

    Kim, Su Jin; Jeon, Hyeshin; Jung, Jae Ho; Lee, Kwang Min; Choi, Hee Young

    2018-02-01

    To investigate efficacy of over-glasses patching treatment for amblyopic children using visual function improvement and Amblyopia Treatment Index (ATI) changes. In a randomized multi-center controlled clinical trial, 107 children aged 3-7 years with moderate amblyopia (visual acuity in the range of 20/40 to 20/100) were included to receive treatment with either an adhesive skin patch or a fabric over-glasses patch. The patients were prescribed 2 h of patching per day for the sound eye. Best-corrected visual acuity (BCVA) was investigated and ATI questionnaires were collected from parents at 5 weeks and 17 weeks after the initiation of treatment. ATI identifies barriers and problems associated with amblyopia treatment. We compared the changes of visual acuity of amblyopic eyes and ATI scores in two groups. At 17 weeks, the mean visual acuity of the amblyopic eye using Snellen chart improved 3.2 lines in the adhesive patching group and 2.7 lines for an over-glasses patching method that fit over eyeglasses (p = 0.345). A similar proportion of subjects in each group had improvement of ≥ 2 lines (adhesive patching group 67% vs over-glasses patching group 67%, p = 0.372). There was also no difference in treatment burden in each group as measured with the Amblyopia Treatment Index. The only item to demonstrate a significant difference between groups was that related to "Treatment makes the eye or eyelids red" (mean 4.0 ± 1.1 vs 3.0 ± 1.0 at 17 weeks, p = 0.001, for adhesive vs over-glasses patch). Over-glasses patching treatment is a useful option for amblyopia treatment when the patients suffer from adverse effects of using adhesive skin patching.

  16. Uranus' largest moon Oberon

    NASA Technical Reports Server (NTRS)

    1986-01-01

    Uranus' outermost and largest moon, Oberon, is seen in this Voyager 2 image, obtained Jan. 22, 1986, from a distance of 2.77 million kilometers (1.72 million miles). The clear-filter image, shuttered by Voyager's narrow-angle camera, shows that Oberon displays several distinct highly reflective (high-albedo) patches with low-albedo centers. Some of the bright patches are suggestive of radial patterns that could represent impact craters excavated from an icy surface. On average, Oberon reflects about 20 percent of the incident sunlight. The moon is about 1,600 km (1,000 mi) in diameter; resolution of this image is 51 km (32 mi). It was taken two days before Voyager's closest approach to Oberon, at which point the spacecraft will be about 471,000 km (293,000 mi) away. The Voyager project is managed for NASA by the Jet Propulsion Laboratory.

  17. Lightness of an object under two illumination levels.

    PubMed

    Zdravković, Suncica; Economou, Elias; Gilchrist, Alan

    2006-01-01

    Anchoring theory (Gilchrist et al, 1999 Psychological Review 106 795-834) predicts a wide range of lightness errors, including failures of constancy in multi-illumination scenes and a long list of well-known lightness illusions seen under homogeneous illumination. Lightness values are computed both locally and globally and then averaged together. Local values are computed within a given region of homogeneous illumination. Thus, for an object that extends through two different illumination levels, anchoring theory produces two values, one for the patch in brighter illumination and one for the patch in dimmer illumination. Observers can give matches for these patches separately, but they can also give a single match for the whole object. Anchoring theory in its current form is unable to predict these object matches. We report eight experiments in which we studied the relationship between patch matches and object matches. The results show that the object match represents a compromise between the match for the patch in the field of highest illumination and the patch in the largest field of illumination. These two principles are parallel to the rules found for anchoring lightness: highest luminance rule and area rule.

  18. A Compact, Broadband Antenna for Planetary Surface-to-Surface Wireless Communications

    NASA Technical Reports Server (NTRS)

    Barr, Philip; Zaman, Afroz; Miranda, Felix

    2006-01-01

    The Compact Microstrip Monopole Antenna (CMMA) is a novel antenna design that combines a microstrip patch antenna with a three-dimensional structure to attain a highly directive, broadband, compact antenna. A Tri-Lobed Patch (TLP) was designed to minimize the patch's area while reducing the antenna's operating frequency. A Grounding Wall (GW) connects the patch to the ground plane and a Vertical Enclosure Wall (VEW) extends up away from portions of the patch's perimeter. This VEW supplies the antenna with a higher directivity in the radial direction as well as reduces the operating frequency. The CMMA was designed to operate at 2.23 GHz, but experimental results have shown this antenna resonates at 2.05 GHz which is on the order of approximately Lambda(sub o)/11.6 with respect to the antenna's largest dimension, with a directivity and bandwidth of 6.0 dBi, and 130 MHz (6.3 percent), respectively. This miniature, radially emitting antenna makes the CMMA attractive for planetary-based surface-to-surface communications.

  19. Mediation pathways and effects of green structures on respiratory mortality via reducing air pollution

    NASA Astrophysics Data System (ADS)

    Shen, Yu-Sheng; Lung, Shih-Chun Candice

    2017-02-01

    Previous studies have shown both health and environmental benefits of green spaces, especially in moderating temperature and reducing air pollution. However, the characteristics of green structures have been overlooked in previous investigations. In addition, the mediation effects of green structures on respiratory mortality have not been assessed. This study explores the potential mediation pathways and effects of green structure characteristics on respiratory mortality through temperature, primary and secondary air pollutants separately using partial least squares model with data from Taiwan. The measurable characteristics of green structure include the largest patch percentage, landscape proportion, aggregation, patch distance, and fragmentation. The results showed that mortality of pneumonia and chronic lower respiratory diseases could be reduced by minimizing fragmentation and increasing the largest patch percentage of green structure, and the mediation effects are mostly through reducing air pollutants rather than temperature. Moreover, a high proportion of but fragmented green spaces would increase secondary air pollutants and enhance health risks; demonstrating the deficiency of traditional greening policy with primary focus on coverage ratio. This is the first research focusing on mediation effects of green structure characteristics on respiratory mortality, revealing that appropriate green structure planning can be a useful complementary strategy in environmental health management.

  20. Mediation pathways and effects of green structures on respiratory mortality via reducing air pollution.

    PubMed

    Shen, Yu-Sheng; Lung, Shih-Chun Candice

    2017-02-23

    Previous studies have shown both health and environmental benefits of green spaces, especially in moderating temperature and reducing air pollution. However, the characteristics of green structures have been overlooked in previous investigations. In addition, the mediation effects of green structures on respiratory mortality have not been assessed. This study explores the potential mediation pathways and effects of green structure characteristics on respiratory mortality through temperature, primary and secondary air pollutants separately using partial least squares model with data from Taiwan. The measurable characteristics of green structure include the largest patch percentage, landscape proportion, aggregation, patch distance, and fragmentation. The results showed that mortality of pneumonia and chronic lower respiratory diseases could be reduced by minimizing fragmentation and increasing the largest patch percentage of green structure, and the mediation effects are mostly through reducing air pollutants rather than temperature. Moreover, a high proportion of but fragmented green spaces would increase secondary air pollutants and enhance health risks; demonstrating the deficiency of traditional greening policy with primary focus on coverage ratio. This is the first research focusing on mediation effects of green structure characteristics on respiratory mortality, revealing that appropriate green structure planning can be a useful complementary strategy in environmental health management.

  1. Satellite image based quantification of invasion and patch dynamics of mesquite ( Prosopis juliflora) in Great Rann of Kachchh, Kachchh Biosphere Reserve, Gujarat, India

    NASA Astrophysics Data System (ADS)

    Pasha, S. Vazeed; Satish, K. V.; Reddy, C. Sudhakar; Prasada Rao, P. V. V.; Jha, C. S.

    2014-10-01

    The invasion of alien species is a significant threat to global biodiversity and the top driver of climate change. The present study was conducted in the Great Rann of Kachchh, part of Kachchh Biosphere Reserve, Gujarat, India, which has been severely affected by invasion of Prosopis juliflora. The invasive weed infestation has been identified using multi-temporal remote sensing datasets of 1977, 1990, 1999, 2005 and 2011. Spatial analyses of the transition matrix, extent of invasive colonies, patchiness, coalescence and rate of spread were carried out. During the study period of three and half decades, almost 295 km2 of the natural land cover was converted into Prosopis cover. This study has shown an increment of 42.9% of area under Prosopis cover in the Great Rann of Kachchh, part of the Kachchh Biosphere Reserve during 1977 to 2011. Spatial analysis indicates high occupancy of Prosopis cover with most of the invasion (95.9%) occurring in the grasslands and only 4.1% in other land cover types. The process of Prosopis invasion shows high patch initiation, followed by coalescence, indicating aggressive colonization of species. The number of patches within an area of < 1 km2 increased from 1977 to 2011, indicating the formation of new Prosopis habitats by replacing the grasslands. The largest patch of Prosopis cover increased from 144 km2 in 1977 to 430 km2 in 2011. The estimated mean patch size was 7.8 km2 in 1977. The mean patch size was largest during 2011, i.e., 9 km2. The annual spread rate for Prosopis has been estimated as 2.1% during 2005-2011. The present work has investigated the long term changes in Prosopis cover in the Great Rann of Kachchh, part of Kachchh Biosphere Reserve. The spatial database generated will be useful in preparing strategies for the management of Prosopis juliflora.

  2. The influence of changes in land use and landscape patterns on soil erosion in a watershed.

    PubMed

    Zhang, Shanghong; Fan, Weiwei; Li, Yueqiang; Yi, Yujun

    2017-01-01

    It is very important to have a good understanding of the relation between soil erosion and landscape patterns so that soil and water conservation in river basins can be optimized. In this study, this relationship was explored, using the Liusha River Watershed, China, as a case study. A distributed water and sediment model based on the Soil and Water Assessment Tool (SWAT) was developed to simulate soil erosion from different land use types in each sub-basin of the Liusha River Watershed. Observed runoff and sediment data from 1985 to 2005 and land use maps from 1986, 1995, and 2000 were used to calibrate and validate the model. The erosion modulus for each sub-basin was calculated from SWAT model results using the different land use maps and 12 landscape indices were chosen and calculated to describe the land use in each sub-basin for the different years. The variations in instead of the absolute amounts of the erosion modulus and the landscape indices for each sub-basin were used as the dependent and independent variables, respectively, for the regression equations derived from multiple linear regression. The results indicated that the variations in the erosion modulus were closely related to changes in the large patch index, patch cohesion index, modified Simpson's evenness index, and the aggregation index. From the regression equation and the corresponding landscape indices, it was found that watershed erosion can be reduced by decreasing the physical connectivity between patches, improving the evenness of the landscape patch types, enriching landscape types, and enhancing the degree of aggregation between the landscape patches. These findings will be useful for water and soil conservation and for optimizing the management of watershed landscapes. Copyright © 2016 Elsevier B.V. All rights reserved.

  3. Selecting landscape metrics as indicators of spatial heterogeneity-A comparison among Greek landscapes

    NASA Astrophysics Data System (ADS)

    Plexida, Sofia G.; Sfougaris, Athanassios I.; Ispikoudis, Ioannis P.; Papanastasis, Vasilios P.

    2014-02-01

    This paper investigates the spatial heterogeneity of three landscapes along an altitudinal gradient and different human land use. The main aim was the identification of appropriate landscape indicators using different extents. ASTER image was used to create a land cover map consisting of three landscapes which differed in altitude and land use. A number of landscape metrics quantifying patch complexity, configuration, diversity and connectivity were derived from the thematic map at the landscape level. There were significant differences among the three landscapes regarding these four aspects of landscape heterogeneity. The analysis revealed a specific pattern of land use where lowlands are being increasingly utilized by humans (percentage of agricultural land = 65.84%) characterized by physical connectedness (high values of Patch Cohesion Index) and relatively simple geometries (low values of fractal dimension index). The landscape pattern of uplands was found to be highly diverse based upon the Shannon Diversity index. After selecting the scale (600 ha) where metrics values stabilized, it was shown that metrics were more correlated at the small scale of 60 ha. From the original 24 metrics, 14 individual metrics with high Spearman correlation coefficient and Variance Inflation Factor criterion were eliminated, leaving 10 representative metrics for subsequent analysis. Data reduction analysis showed that Patch Density, Area-Weighted Mean Fractal Dimension Index and Patch Cohesion Index are suitable to describe landscape patterns irrespective of the scale. A systematic screening of these metrics could enhance a deeper understanding of the results obtained by them and contribute to a sustainable landscape management of Mediterranean landscapes.

  4. Stratum corneum profiles of inflammatory mediators in patch test reactions to common contact allergens and sodium lauryl sulfate.

    PubMed

    Koppes, S A; Ljubojevic Hadzavdic, S; Jakasa, I; Franceschi, N; Jurakić Tončić, R; Marinović, B; Brans, R; Gibbs, S; Frings-Dresen, M H W; Rustemeyer, T; Kezic, S

    2017-06-01

    Recent studies have demonstrated allergen-specific differences in the gene expression of inflammatory mediators in patch tested skin. To determine levels of various inflammatory mediators in the stratum corneum (SC) after patch testing with common contact allergens and the skin irritant sodium lauryl sulfate (SLS). In total, 27 individuals who had previously patch tested positive to nickel, chromium, methylchloroisothiazolinone/methylisothiazolinone (MCI/MI) or para-phenylenediamine were retested and then patch tested with SLS and petrolatum, with petrolatum serving as the patch test control. At 72 h, the test sites were clinically graded and the SC samples collected on adhesive tape. The levels of 18 of the 32 quantified mediators differed significantly from that of the control patches for at least one of the tested substances. SLS and MCI/MI induced the largest number of immunomediators. Interleukin (IL)-16 levels were significantly higher in patch test reactions in all allergens than they were in the controls, while no significant difference was detected for SLS. Furthermore, a strong negative correlation was found between strength of patch test reaction and IL-1α levels. Cytokine profiles in the SC of patch tested skin did not show a distinct allergen-specific pattern. However, MCI/MI induced a larger and wider immune response than the other allergens, perhaps due to its potency as an irritant. The levels of IL-16 were significantly increased in patch test reactions to allergens but not to SLS; thus, they may help clinicians to differentiate between allergic contact dermatitis and irritant contact dermatitis. © 2016 British Association of Dermatologists.

  5. Skin irritability to sodium lauryl sulfate is associated with increased positive patch test reactions.

    PubMed

    Schwitulla, J; Brasch, J; Löffler, H; Schnuch, A; Geier, J; Uter, W

    2014-07-01

    As previous observations have indicated an inter-relationship between irritant and allergic skin reactions we analysed data of synchronous allergen and sodium lauryl sulfate (SLS) patch tests in terms of a relationship between SLS responsiveness and allergic patch test reactions. To analyse differences in terms of allergen-specific and overall reaction profiles between patients with vs. those without an irritant reaction to SLS. Clinical data of 26 879 patients patch tested from 2008 to 2011 by members of the Information Network of Departments of Dermatology were analysed. After descriptive analyses, including the MOAHLFA index, the positivity ratio and the reaction index, a negative binomial hurdle model was adopted to investigate the correlation between SLS reactivity and positive patch test reactions. Men, patients aged ≥ 40 years and patients with an occupational dermatitis background were over-represented in the SLS-reactive group. Patients with an irritant reaction to SLS showed a higher proportion of weak positive reactions, as well as more questionable and irritant reactions to contact allergens than patients not reactive to SLS. The risk of an additional positive patch test reaction increased by 22% for SLS-reactive patients compared with those who were SLS negative. The marked association between SLS reactivity and the number of positive reactions in patch test patients may be due to nonspecific increased skin reactivity at the moment of patch testing only. However, increased SLS reactivity could also be due to longer-lasting enhanced skin irritability, which may have promoted (poly-)sensitization. Further studies, for example with longitudinal data on patients repeatedly patch tested with SLS and contact allergens, are necessary. © 2014 British Association of Dermatologists.

  6. Heterogeneity image patch index and its application to consumer video summarization.

    PubMed

    Dang, Chinh T; Radha, Hayder

    2014-06-01

    Automatic video summarization is indispensable for fast browsing and efficient management of large video libraries. In this paper, we introduce an image feature that we refer to as heterogeneity image patch (HIP) index. The proposed HIP index provides a new entropy-based measure of the heterogeneity of patches within any picture. By evaluating this index for every frame in a video sequence, we generate a HIP curve for that sequence. We exploit the HIP curve in solving two categories of video summarization applications: key frame extraction and dynamic video skimming. Under the key frame extraction frame-work, a set of candidate key frames is selected from abundant video frames based on the HIP curve. Then, a proposed patch-based image dissimilarity measure is used to create affinity matrix of these candidates. Finally, a set of key frames is extracted from the affinity matrix using a min–max based algorithm. Under video skimming, we propose a method to measure the distance between a video and its skimmed representation. The video skimming problem is then mapped into an optimization framework and solved by minimizing a HIP-based distance for a set of extracted excerpts. The HIP framework is pixel-based and does not require semantic information or complex camera motion estimation. Our simulation results are based on experiments performed on consumer videos and are compared with state-of-the-art methods. It is shown that the HIP approach outperforms other leading methods, while maintaining low complexity.

  7. Effect of novel mucoadhesive buccal patches of carvedilol on isoprenaline-induced tachycardia

    PubMed Central

    Verma, Navneet; Chattopadhyay, Pronobesh

    2014-01-01

    The main aim of the study was designed to develop bioadhesive buccal patches of carvedilol (CR) and evaluate for isoprenaline-induced tachycardia. Buccal patches of carvedilol were prepared by using chitosan (CH), sodium salt of carboxy methyl cellulose (NaCMC), and polyvinyl alcohol (PVA) as mucoadhesive polymers. The solvent evaporation method was used for the preparation of buccal patches. The patches were evaluated for their physical characteristics like patch thickness, weight variation, content uniformity, folding endurance, surface pH, residence time, in vitro drug release, and in vivo pharmacodynamic study. The swelling index of the patches was found to be proportional to the polymer concentration, whereas surface pH of all the formulated bioadhesive patches was found to lie between neutral ranges. In-vitro release study shows that 94.75% drug was release in 8 hours from the patch, which containing 2% w/v chitosan. The folding endurance result shows good elasticity in all the patches. Application of buccal patches on buccal mucosa of rabbit shows a significant result in % inhibition of isoprenaline-induced tachycardia. Prepared buccal patches of chitosan, NaCMC, and PVA containing Carvedilol meet the ideal requirement for the delivery of cardiovascular drugs and inhibit the isoprenaline tachycardia. PMID:24959419

  8. Effect of novel mucoadhesive buccal patches of carvedilol on isoprenaline-induced tachycardia.

    PubMed

    Verma, Navneet; Chattopadhyay, Pronobesh

    2014-04-01

    The main aim of the study was designed to develop bioadhesive buccal patches of carvedilol (CR) and evaluate for isoprenaline-induced tachycardia. Buccal patches of carvedilol were prepared by using chitosan (CH), sodium salt of carboxy methyl cellulose (NaCMC), and polyvinyl alcohol (PVA) as mucoadhesive polymers. The solvent evaporation method was used for the preparation of buccal patches. The patches were evaluated for their physical characteristics like patch thickness, weight variation, content uniformity, folding endurance, surface pH, residence time, in vitro drug release, and in vivo pharmacodynamic study. The swelling index of the patches was found to be proportional to the polymer concentration, whereas surface pH of all the formulated bioadhesive patches was found to lie between neutral ranges. In-vitro release study shows that 94.75% drug was release in 8 hours from the patch, which containing 2% w/v chitosan. The folding endurance result shows good elasticity in all the patches. Application of buccal patches on buccal mucosa of rabbit shows a significant result in % inhibition of isoprenaline-induced tachycardia. Prepared buccal patches of chitosan, NaCMC, and PVA containing Carvedilol meet the ideal requirement for the delivery of cardiovascular drugs and inhibit the isoprenaline tachycardia.

  9. The influence of body mass index on skin susceptibility to sodium lauryl sulphate.

    PubMed

    Löffler, H; Aramaki, J U N; Effendy, Isaak

    2002-02-01

    The influence of nutrition on the physiological functions of man is well studied. Numerous diseases can be exacerbated by obesity. However, it has not yet been determined whether body weight and body mass index (BMI), as an indicator of a high body fat store, can influence skin sensitivity. This study investigates the correlation between body mass index and the epidermal functions, evaluated by bioengineering methods, before and after an irritant patch test with sodium lauryl sulphate (SLS). Epidermal functions were evaluated using an evaporimeter, chromameter and laser-Doppler-flowmeter. Patch testing was conducted for 48 h with two different concentrations of SLS (0.25% and 0.5%) on the forearms of healthy volunteers. Measurements were performed 24h after patch removal. Obese individuals showed significantly increased transepidermal water loss (TEWL), skin blood flow and skin colour (red) as compared to a control group. However, the degree of skin sensitivity to SLS was not correlated with BMI. Basal biophysical parameters of the skin are primarily correlated with the BMI. This may be caused by obesity-induced physiological changes, e.g. increased sweat gland activity, high blood pressure and physiological temperature-regulating system. The epidermal barrier function, as evaluated after SLS patch testing is, however, not correlated with a high BMI, indicating a normal skin barrier.

  10. [Urbanization expanding process and its spatial characteristics in changping district of Beijing, China].

    PubMed

    Zhang, Feng; Zhang, Xinshi

    2005-06-01

    Urbanization is a massive and unplanned experiment that already affects large acreages worldwide, and has profound social and ecological consequences for both urban and rural residents. Therefore, to comprehensively quantify the urbanization process and to investigate its ecological consequences become the central issues in urban ecological studies. Combining urbanization expanding index with landscape metrics, this paper quantified the urbanization expanding process and the urbanization spatial characteristics in Changping District of Beijing. The results showed that there were three main urbanization models, i. e., urban fringe belt-expending model, main transportation routes line-expending model, and satellite city panel-expending model. The urbanization expansion index showed that urbanization mainly took place during the period from 1989 to 1996, and the urban landscape metrics indicated that there were urban patches isolated expanding and new urban patches emerged from 1989 to 1996, mainly amalgamated expanding from 1996 to 2001 in urban fringe belt-expanding region. In transportation routes line-expanding region, the urban patches isolated expanding, amalgamated expanding and new urban patches emerging took place simultaneously, and mainly urban patches amalgamated expanding during the former period, and new urban patches constantly turning up around satellite city during the latter in satellite city panel-expanding region. This study showed that urbanization expansion integrating landscape metrics might reveal the urbanization expanding process and its spatial characteristics, and would be a good example for the application of landscape metrics.

  11. Species presence frequency and diversity in different patch types along an altitudinal gradient: Larix chinensis Beissn in Qinling Mountains (China).

    PubMed

    Huang, Minyi; Duan, Renyan; Wang, Shixiong; Wang, Zhigao; Fan, Weiyi

    2016-01-01

    Forest communities are mosaic systems composed of patches classified into four different developmental patch types: gap patch (G), building patch (B), mature patch (M) and degenerate patch (D). To study the mechanisms maintaining diversity in subalpine coniferous forests, species presence frequency and diversity in the four distinct patch types (G, B, M and D) of Larix chinensis conifer forests at three altitudinal gradients in the Qinling Mountains were analyzed. Our results were as follows: (1) Different species (or functional groups) had distinct presence frequencies in the four different patch types along the altitudinal gradient; (2) Some species or functional groups (species groups sharing similar traits and responses to the environment) only occurred in some specific patches. For seed dispersal, species using wind mainly occurred in G and D, while species using small animals mainly occurred in B and M; (3) Species composition of adjacent patch types was more similar than non-adjacent patch types, based on the lower β diversity index of the former; (4) The maximum numbers of species and two diversity indices (D' and H') were found in the middle altitudes. Various gap-forming processes and dispersal limitation may be the two major mechanisms determining species diversity in Larix chinensis coniferous forests at the patch scale.

  12. GIS-based approach for quantifying landscape connectivity of Javan Hawk-Eagle habitat

    NASA Astrophysics Data System (ADS)

    Nurfatimah, C.; Syartinilia; Mulyani, Y. A.

    2018-05-01

    Javan Hawk-Eagle (Nisaetus bartelsi; JHE) is a law-protected endemic raptor which currently faced the decreased in number and size of habitat patches that will lead to patch isolation and species extinction. This study assessed the degree of connectivity between remnant habitat patches in central part of Java by utilizing Conefor Sensinode software as an additional tool for ArcGIS. The connectivity index was determined by three fractions which are infra, flux and connector. Using connectivity indices successfully identified 4 patches as core habitat, 9 patches as stepping-stone habitat and 6 patches as isolated habitat were derived from those connectivity indices. Those patches then being validated with land cover map derived from Landsat 8 of August 2014. 36% of core habitat covered by natural forest, meanwhile stepping stone habitat has 55% natural forest and isolated habitat covered by 59% natural forest. Isolated patches were caused by zero connectivity (PCcon = 0) and the patch size which too small to support viable JHE population. Yet, the condition of natural forest and the surrounding matrix landscape in isolated patches actually support the habitat need. Thus, it is very important to conduct the right conservation management system based on the condition of each patches.

  13. "Phase capture" in amblyopia: the influence function for sampled shape.

    PubMed

    Levi, Dennis M; Li, Roger W; Klein, Stanley A

    2005-06-01

    This study was concerned with what stimulus information humans with amblyopia use to judge the shape of simple objects. We used a string of four Gabor patches to define a contour. A fifth, center patch served as the test pattern. The observers' task was to judge the location of the test pattern relative to the contour. The contour was either a straight line, or an arc with positive or negative curvature. We asked whether phase shifts in the inner or outer pairs of patches distributed along the contour influence the perceived shape. That is, we measured the phase shift influence function. Our results, consistent with previous studies, show that amblyopes are imprecise in shape discrimination, showing elevated thresholds for both lines and curves. We found that amblyopes often make much larger perceptual errors (biases) than do normal observers in the absence of phase shifts. These errors tend to be largest for curved shapes and at large separations. In normal observers, shifting the phase of inner patches of the string by 0.25 cycle results in almost complete phase capture (attraction) at the smallest separation (2 lambda), and the capture effect falls off rapidly with separation. A 0.25 cycle shift of the outer pair of patches has a much smaller effect, in the opposite direction (repulsion). While several amblyopic observers showed reduced capture by the phase of the inner patches, to our surprise, several of the amblyopes were sensitive to the phase of the outer patches. We used linear multiple regression to determine the weights of all cues to the task: the carrier phase of the inner patches, carrier phase of the outer patches and the envelope of the outer patches. Compared to normal observers, some amblyopes show a weaker influence of the phase of the inner patches, and a stronger influence of both the phase and envelope of the outer patches. We speculate that this may be a consequence of abnormal "crowding" of the inner patches by the outer ones.

  14. Predicting nucleic acid binding interfaces from structural models of proteins

    PubMed Central

    Dror, Iris; Shazman, Shula; Mukherjee, Srayanta; Zhang, Yang; Glaser, Fabian; Mandel-Gutfreund, Yael

    2011-01-01

    The function of DNA- and RNA-binding proteins can be inferred from the characterization and accurate prediction of their binding interfaces. However the main pitfall of various structure-based methods for predicting nucleic acid binding function is that they are all limited to a relatively small number of proteins for which high-resolution three dimensional structures are available. In this study, we developed a pipeline for extracting functional electrostatic patches from surfaces of protein structural models, obtained using the I-TASSER protein structure predictor. The largest positive patches are extracted from the protein surface using the patchfinder algorithm. We show that functional electrostatic patches extracted from an ensemble of structural models highly overlap the patches extracted from high-resolution structures. Furthermore, by testing our pipeline on a set of 55 known nucleic acid binding proteins for which I-TASSER produces high-quality models, we show that the method accurately identifies the nucleic acids binding interface on structural models of proteins. Employing a combined patch approach we show that patches extracted from an ensemble of models better predicts the real nucleic acid binding interfaces compared to patches extracted from independent models. Overall, these results suggest that combining information from a collection of low-resolution structural models could be a valuable approach for functional annotation. We suggest that our method will be further applicable for predicting other functional surfaces of proteins with unknown structure. PMID:22086767

  15. Multichannel noninvasive human-machine interface via stretchable µm thick sEMG patches for robot manipulation

    NASA Astrophysics Data System (ADS)

    Zhou, Ying; Wang, Youhua; Liu, Runfeng; Xiao, Lin; Zhang, Qin; Huang, YongAn

    2018-01-01

    Epidermal electronics (e-skin) emerging in recent years offer the opportunity to noninvasively and wearably extract biosignals from human bodies. The conventional processes of e-skin based on standard microelectronic fabrication processes and a variety of transfer printing methods, nevertheless, unquestionably constrains the size of the devices, posing a serious challenge to collecting signals via skin, the largest organ in the human body. Herein we propose a multichannel noninvasive human-machine interface (HMI) using stretchable surface electromyography (sEMG) patches to realize a robot hand mimicking human gestures. Time-efficient processes are first developed to manufacture µm thick large-scale stretchable devices. With micron thickness, the stretchable µm thick sEMG patches show excellent conformability with human skin and consequently comparable electrical performance with conventional gel electrodes. Combined with the large-scale size, the multichannel noninvasive HMI via stretchable µm thick sEMG patches successfully manipulates the robot hand with eight different gestures, whose precision is as high as conventional gel electrodes array.

  16. Understory vegetation and site factors : implications for a managed Wisconsin landscape

    Treesearch

    K.D. Brosofske; J. Chen; Thomas R. Crow

    2001-01-01

    We investigated relationships between edaphic and environmental factors (soil, forest floor, topography, and canopy) and understory vegetation (composition, richness, and Shannon-Wiener diversity index, H')among 77 plots representing seven major patch types comprising a landscape in northern Wisconsin that has a long history of human management. Sampled patch...

  17. Landscape analysis of urban growth patterns in Seremban, Malaysia, using spatio-temporal data

    NASA Astrophysics Data System (ADS)

    Aburas, Maher M.; Abdullah, Sabrina H.; Ramli, Mohammad F.; As'shari, Zulfa H.

    2016-06-01

    Urban growth is one of the major issues that have played a significant role in destroying the ecosystem in recent years. Landscape analysis is an important technique widely used to evaluate urban growth patterns. In this study, four land-use maps from 1984, 1990, 2000, and 2010 have been used to analyze an urban landscape. The values of a built-up area were initially computed using a geographic information system environment based on the spatial gradient approach. Mathematical matrices were then used to determine the amount of change in urban patches in each direction. Results of the number of patches, landscape shape index, aggregation index, and total edges confirmed that the urban patches in Seremban, Malaysia, have become more dispersed from 2000 to 2010. The urban patches have also become more continuous, especially in the north-western part of Seremban as a result of the urban development in the Nilai District. These results indicate the necessity to create new policies in the city to protect the sustainability of the land use of Seremban.

  18. Corridors Increase Plant Species Richness at Large Scales

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Damschen, Ellen I.; Haddad, Nick M.; Orrock,John L.

    2006-09-01

    Habitat fragmentation is one of the largest threats to biodiversity. Landscape corridors, which are hypothesized to reduce the negative consequences of fragmentation, have become common features of ecological management plans worldwide. Despite their popularity, there is little evidence documenting the effectiveness of corridors in preserving biodiversity at large scales. Using a large-scale replicated experiment, we showed that habitat patches connected by corridors retain more native plant species than do isolated patches, that this difference increases over time, and that corridors do not promote invasion by exotic species. Our results support the use of corridors in biodiversity conservation.

  19. Corridors increase plant species richness at large scales.

    PubMed

    Damschen, Ellen I; Haddad, Nick M; Orrock, John L; Tewksbury, Joshua J; Levey, Douglas J

    2006-09-01

    Habitat fragmentation is one of the largest threats to biodiversity. Landscape corridors, which are hypothesized to reduce the negative consequences of fragmentation, have become common features of ecological management plans worldwide. Despite their popularity, there is little evidence documenting the effectiveness of corridors in preserving biodiversity at large scales. Using a large-scale replicated experiment, we showed that habitat patches connected by corridors retain more native plant species than do isolated patches, that this difference increases over time, and that corridors do not promote invasion by exotic species. Our results support the use of corridors in biodiversity conservation.

  20. Preparation of mucoadhesive oral patches containing tetracycline hydrochloride and carvacrol for treatment of local mouth bacterial infections and candidiasis.

    PubMed

    Obaidat, Rana M; Bader, Ammar; Al-Rajab, Wafa; Abu Sheikha, Ghassan; Obaidat, Aiman A

    2011-01-01

    The specific aim of this work was to prepare mucoadhesive patches containing tetracycline hydrochloride and carvacrol in an attempt to develop a novel oral drug delivery system for the treatment of mouth infections. The bilayered patches were prepared using ethyl cellulose as a backing layer and carbopol 934 as a matrix mucoadhesive layer. Patches were prepared with different loading amounts of tetracycline hydrochloride and carvacrol. The antimicrobial activity was assessed for the prepared patches using the disc-diffusion method against the yeast Candida albicans and five bacterial strains, including Pseudomonas aeruginosa, Escherichia coli, Bacillus cereus, Staphylococcus aureus, and Bacillus bronchispti. In this work, we highlighted the possibility of occurrence of a synergistic action between carvacrol and tetracycline. The best formulation was selected based on microbiological tests, drug release, ex-vivo mucoadhesive performance, and swelling index. Physical characteristics of the selected formulations were determined. These included pH, patch thickness, weight uniformity, content uniformity, folding endurance, and patch stability.

  1. [Spatial characteristics analysis of Huizhou-Styled Village based on ideal ecosystem model and 3D landscape indices: A case in Chengkan, China].

    PubMed

    Yao, Meng Yuan; Yan, Shi Jiang; Wu, Yan Lan

    2016-12-01

    Huizhou-Styled Village is a typical representative of the traditional Chinese ancient villages. It preserves plentiful information of the regional culture and ecological connotation. The Huizhou-Style is the apotheosis of harmony between the Chinese ancient people and nature. The research and protection of Huizhou-Styled Village plays a very important role in fields of ecology, geography, architecture and esthetics. This paper took Chengkan Village of Anhui Province as an exa-mple, and proposed a new model of ideal ecosystem oriented in theories of Feng-shui and psychological field. The new method of characterizing 3D landscape index was introduced to explore the spatial patterns of Huizhou-Styled Village and the functionality of the composited landscape components in a quantitative way. The results indicated that, Chengkan Village showed a spatially composited pattern of "mountain-forest-village-river-forest". It formed an ideal settlement ring structure with human architecture in the center and natural landscape around in the horizontal and vertical horizons. The traditional method based on the projection distance caused the deviation of the landscape index, such as underestimating the area and distance of landscape patch. The 3D landscape index of average patch area was 6.7% higher than the 2D landscape index. The increasing rate ofarea proportion in 3D index was 1.0% higher than that of 2D index in forest lands. Area proportion of the other landscapes decreased, especially the artificial landscapes like construction and cropland landscapes. The area and perimeter metric were underestimated, whereas the shape metric and the diversity metric were overestimated. This caused the underestimation of the dominance of natural patches was underestimated and the overestimation of the dominance of artificial patches during the analysis of landscape pattern. The 3D landscape index showed that the natural elements and their combination in Chengkan Village ecosystem reflected better ecological function, the key elements and the composited landscape ecosystem preserved higher stability, connectivity and aggregation. The quantitative confirmation showed that the Huizhou-Styled Village represented by Chengkan Village is an ideal ecosystem.

  2. FlowShape: a runoff connectivity index for patched environments, based on shape and orientation of runoff sources

    NASA Astrophysics Data System (ADS)

    Callegaro, Chiara; Malkinson, Dan; Ursino, Nadia; Wittenberg, Lea

    2016-04-01

    The properties of vegetation cover are recognized to be a key factor in determining runoff processes and yield over natural areas. Still, how the actual vegetation spatial distribution affects these processes is not completely understood. In Mediterranean semi-arid regions, patched landscapes are often found, with clumped vegetation, grass or shrubs, surrounded by bare soil patches. These two phases produce a sink-source system for runoff, as precipitation falling over bare areas barely infiltrates and rather flows downslope. In contrast, vegetated patches have high infiltrability and can partially retain the runon water. We hypothesize that, at a relatively small scale, the shape and orientation of bare soil patches with respect to the runoff flow direction is a significant for the connectivity of the runoff flow paths, and consequently for runoff values. We derive an index, FlowShape, which is candidate to be a good proxy for runoff connectivity and thus runoff production in patched environments. FlowShape is an area-weighted average of the geometrical properties of each bare soil patch. Eight experimental plots in northern Israel were monitored during 2 years after a wildfire which occurred in 2006. Runoff was collected and measured - along with rainfall depth - after each rainfall event, at different levels of vegetation cover corresponding to post-fire recovery of vegetation and seasonality. We obtained a good correlation between FlowShape and the runoff coefficient, at two conditions: a minimal percentage of vegetation cover over the plot, and minimal rainfall depth. Our results support the hypothesis that the spatial distribution of the two phases (vegetation and bare soil) in patched landscapes dictates, at least partially, runoff yield. The correlation between the runoff coefficient and FlowShape, which accounts for shape and orientation of soil patches, is higher than the correlation between the runoff coefficient and the bare soil percentage alone. Besides that, the existence of a vegetation cover threshold under which FlowShape loses correlation with runoff yield, suggests that different processes occur at different levels of vegetation cover. On bare or almost bare plots, runoff flows as a sheet, and small isolated plants do not impose a directionality to the flow or interrupt runoff connectivity. On the other hand, rainfall depth - and possibly rainfall intensity - also affect the hydrological processes of infiltration and runoff production, and thus the applicability of any purely geometrical index. We compared the correlation to runoff coefficient with the FlowShape and FlowLength, a well-known index for runoff connectivity (Mayor et al., 2008) which is defined as the average of runoff flow paths over the plot. As microtopography was not available, our plots were idealized as planar hillslopes. We found that FlowShape is a better predictor than FlowLength for runoff yield over our experimental plots.

  3. Effects of Artcure Diffusional Patch application on pain and functional status in lumbar disc herniation patients: a prospective randomized controlled study.

    PubMed

    Uğurlu, Mahmut; Aksekili, Mehmet Atıf Erol; Alkan, Berat Meryem; Kara, Halil; Çağlar, Ceyhun

    2017-06-12

    The aim of this study was to assess the efficacy of the Artcure Diffusional Patch, which contains a mixture of 6 herbal oils (oleum thymi, oleum limonis, oleum nigra, oleum rosmarini, oleum chamomilla, oleum lauriexpressum) and has a hypoosmolar lipid structure, in the conservative treatment of lumbar disc herniation patients and to show the advantages and/or possibility of using this as an alternative method to surgery. Of the 120 patients enrolled, 79 clinically diagnosed patients were included in the study. Clinical evaluations were performed on patients who had findings of protrusion or extrusion in their magnetic resonance results. The treatment group was treated with the Artcure Diffusional Patch while the control group received a placebo transdermal diffusional patch. The functional state of patients was measured using the Oswestry Disability Index and pain intensity was measured with a visual analog scale as primary outcomes. Secondary outcomes of the study were Lasegue's sign, the femoral stretching test, and paravertebral muscle spasm. The treatment group showed a dramatic recovery in the first month following the application in regards to Oswestry Disability Index scores and visual analog scale values. The patients treated with the Artcure Diffusional Patch showed a statistically significant difference in recovery as compared to the control group. These findings suggest that the Artcure Diffusional Patch may be an alternative for the conservative treatment of lumbar disc herniation with radiculopathy.

  4. Cognitive Efficacy (SIB) of 13.3 Versus 4.6 mg/24 h Rivastigmine Patch in Severe Alzheimer's Disease.

    PubMed

    Isaacson, Richard S; Ferris, Steven; Velting, Drew M; Meng, Xiangyi

    2016-05-01

    Severe Impairment Battery (SIB) data from the 24-week, randomized, double-blind ACTivities of daily living and cognitION (ACTION) study suggest that patients with severe Alzheimer's disease (AD) benefit from treatment with 13.3 versus 4.6 mg/24 h rivastigmine patch. The objective of this retrospective analysis was to further examine the cognitive efficacy of 13.3 versus 4.6 mg/24 h rivastigmine patch on individual SIB items, and SIB domains derived using factor analysis of these items. Change from baseline at Week 24 on 9 new factor-defined domains and individual items was calculated and compared using effect sizes (Cohen's d). Numerically less decline was observed with 13.3 versus 4.6 mg/24 h patch on all domains and the majority of individual items. Largest least squares mean treatment differences were observed on "visuospatial reasoning," "object naming," "recognition," "design copying," "social agency," "ideational praxis," and "comprehension" domains. These findings suggest 13.3 mg/24 h rivastigmine patch demonstrates broad cognitive efficacy across a range of SIB items and domains in patients with severe AD. © The Author(s) 2015.

  5. Cylindrical Antenna Using Near Zero Index Metamaterial

    DTIC Science & Technology

    2012-07-24

    circularly polarized microstrip patch antenna (SFCP-MPA). Simultaneous enhancement on antenna gain, impedance bandwidth (ZBW) and axial-ratio...K. L. Chung, and P. Akkaraekthalin, "Simultaneous gain and bandwidths enhancement of a single-feed circularly polarized microstrip patch antenna ...device for enhancing the directivity and port isolation of a dual-frequency dual- polarization (DFDP) microstrip antenna by using metamaterial

  6. Effect of a Low-Dose Contraceptive Patch on Efficacy, Bleeding Pattern, and Safety

    PubMed Central

    Wiegratz, Inka; Bassol, Susana; Weisberg, Edith; Mellinger, Uwe

    2014-01-01

    This Phase III, uncontrolled, open-label, multicenter study was conducted to investigate the contraceptive efficacy, bleeding pattern, and cycle control of a novel once-a-week contraceptive patch, delivering low-dose ethinyl estradiol (EE) and gestodene (GSD) at the same systemic exposure seen after oral administration of a combined oral contraceptive containing 0.02 mg EE/0.06 mg GSD. Participants were women aged 18 to 35 years, all of whom received the EE/GSD patch for 13 cycles each of 21 treatment days (one patch per week for 3 weeks) followed by a 7-day, patch-free interval. The primary efficacy variable was the occurrence of unintended pregnancies during the study period as assessed by life table analysis and the Pearl Index. Secondary efficacy variables were days with bleeding during four 90-day reference periods and during 1 treatment year, bleeding pattern, and cycle control. The Kaplan-Meier probability of contraceptive protection after 364 treatment days was 98.8% and the adjusted Pearl Index was 0.81. The percentage of participants with intracyclic bleeding/spotting decreased over time, from 11.4% to 6.8% in cycles 1 and 12, respectively. Almost all participants (range: 90.8%-97.6%) experienced withdrawal bleeding across the study period. Compliance was very high (mean: 97.9%; median: 100%). The most frequent adverse events were headache (9.5%) and application site reaction (8.5%); no clinically significant safety concerns were observed. Results suggest the EE/GSD patch is highly effective in preventing pregnancy. Menstrual bleeding pattern was favorable and within the ranges expected of a healthy female population. The patch was well tolerated and treatment compliance was high. PMID:24784719

  7. Quantifying the importance of patch-specific changes in habitat to metapopulation viability of an endangered songbird.

    PubMed

    Horne, Jon S; Strickler, Katherine M; Alldredge, Mathew

    2011-10-01

    A growing number of programs seek to facilitate species conservation using incentive-based mechanisms. Recently, a market-based incentive program for the federally endangered Golden-cheeked Warbler (Dendroica chrysoparia) was implemented on a trial basis at Fort Hood, an Army training post in Texas, USA. Under this program, recovery credits accumulated by Fort Hood through contracts with private landowners are used to offset unintentional loss of breeding habitat of Golden-cheeked Warblers within the installation. Critical to successful implementation of such programs is the ability to value, in terms of changes to overall species viability, both habitat loss and habitat restoration or protection. In this study, we sought to answer two fundamental questions: Given the same amount of change in breeding habitat, does the change in some patches have a greater effect on metapopulation persistence than others? And if so, can characteristics of a patch (e.g., size or spatial location) be used to predict how the metapopulation will respond to these changes? To answer these questions, we describe an approach for using sensitivity analysis of a metapopulation projection model to predict how changes to specific habitat patches would affect species viability. We used a stochastic, discrete-time projection model based on stage-specific estimates of survival and fecundity, as well as various assumptions about dispersal among populations. To assess a particular patch's leverage, we quantified how much metapopulation viability was expected to change in response to changing the size of that patch. We then related original patch size and distance from the largest patch to each patch's leverage to determine if general patch characteristics could be used to develop guidelines for valuing changes to patches within a metapopulation. We found that both the characteristic that best predicted patch leverage and the magnitude of the relationship changed under different model scenarios. Thus, we were unable to find a consistent set of relationships, and therefore we emphasize the dangers in relying on general guidelines to assess patch value. Instead, we provide an approach that can be used to quantitatively evaluate patch value and identify critical needs for future research.

  8. Experiments on selection of feeding site and food size in oystercatchers, Haematopus ostralegus, of different social status

    NASA Astrophysics Data System (ADS)

    Leopold, M. F.; Swennen, C.; De Bruijn, L. L. M.

    Oystercatchers, Haematopus ostralegus, were tested for size selection in two prey species, cockles ( Cerastoderma edule) and mussels ( Mytilus edulis), under semi-natural, but strictly experimental, conditions that allowed recovery of all shells of prey items eaten. Within any patch of cockles offered, size was not an important selection criterion for the birds. The mean length of cockles consumed always differed less than 1 mm (the measuring accuracy) from the mean length of the cockles presented. When given a choice between patches of different prey quality, the birds tended to select patches according to their relative dominance status, with the most dominant bird feeding mainly in the patch where the prey items had the largest flesh contents. Less dominant birds were forced out of the preferred patch and obtained most of theif food from a patch of presumedly lower quality. One of these birds adapted its prey-handling method and its bill shape for efficient feeding in such a low quality pathc, and it continued feeding in that patch, even after the dominant conspecifics had been removed. In experiments with mussels as prey, the test bird did not select primarily on the basis of size but tended to eat those mussels that were easiest to open. It is concluded that size selection in oystercatchers that eat either cockles or mussels ends with the choice of a certain foraging patch. Within a patch of cockles of one year-class, which is the field condition for the majority of oystercatchers in the Wadden Sea, no selection for size occurs, because this would take too much extra searching time to be profitable.

  9. Habitat quality and geometry affect patch occupancy of two Orthopteran species.

    PubMed

    Pasinelli, Gilberto; Meichtry-Stier, Kim; Birrer, Simon; Baur, Bruno; Duss, Martin

    2013-01-01

    Impacts of habitat loss and fragmentation on distribution and population size of many taxa are well established. In contrast, less is known about the role of within-patch habitat quality for the spatial dynamics of species, even though within-patch habitat quality may substantially influence the dynamics of population networks. We studied occurrence patterns of two Orthopteran species in relation to size, isolation and quality of habitat patches in an intensively managed agricultural landscape (16.65 km(2)) in the Swiss lowland. Occurrence of field crickets (Gryllus campestris) was positively related to patch size and negatively to the distance to the nearest occupied patch, two measures of patch geometry. Moreover, field crickets were more likely to occur in extensively managed meadows, meadows used at low intensity and meadows dominated by Poa pratensis, three measures of patch quality. Occurrence of the large gold grasshopper (Chrysochraon dispar) was negatively related to two measures of patch geometry, distance to the nearest occupied patch and perimeter index (ratio of perimeter length to patch area). Further, large gold grasshoppers were more likely to occupy patches close to water and patches with vegetation left uncut over winter, two measures of patch quality. Finally, examination of patch occupancy dynamics of field crickets revealed that patches colonized in 2009 and patches occupied in both 2005 and 2009 were larger, better connected and of other quality than patches remaining unoccupied and patches from which the species disappeared. The strong relationships between Orthopteran occurrence and aspects of patch geometry found in this study support the "area-and-isolation paradigm". Additionally, our study reveals the importance of patch quality for occurrence patterns of both species, and for patch occupancy dynamics in the field cricket. An increased understanding of patch occupancy patterns may be gained if inference is based on variables related to both habitat geometry and quality.

  10. Predicting nucleic acid binding interfaces from structural models of proteins.

    PubMed

    Dror, Iris; Shazman, Shula; Mukherjee, Srayanta; Zhang, Yang; Glaser, Fabian; Mandel-Gutfreund, Yael

    2012-02-01

    The function of DNA- and RNA-binding proteins can be inferred from the characterization and accurate prediction of their binding interfaces. However, the main pitfall of various structure-based methods for predicting nucleic acid binding function is that they are all limited to a relatively small number of proteins for which high-resolution three-dimensional structures are available. In this study, we developed a pipeline for extracting functional electrostatic patches from surfaces of protein structural models, obtained using the I-TASSER protein structure predictor. The largest positive patches are extracted from the protein surface using the patchfinder algorithm. We show that functional electrostatic patches extracted from an ensemble of structural models highly overlap the patches extracted from high-resolution structures. Furthermore, by testing our pipeline on a set of 55 known nucleic acid binding proteins for which I-TASSER produces high-quality models, we show that the method accurately identifies the nucleic acids binding interface on structural models of proteins. Employing a combined patch approach we show that patches extracted from an ensemble of models better predicts the real nucleic acid binding interfaces compared with patches extracted from independent models. Overall, these results suggest that combining information from a collection of low-resolution structural models could be a valuable approach for functional annotation. We suggest that our method will be further applicable for predicting other functional surfaces of proteins with unknown structure. Copyright © 2011 Wiley Periodicals, Inc.

  11. Landscape connectivity promotes plant biodiversity spillover into non-target habitats.

    PubMed

    Brudvig, Lars A; Damschen, Ellen I; Tewksbury, Joshua J; Haddad, Nick M; Levey, Douglas J

    2009-06-09

    Conservation efforts typically focus on maximizing biodiversity in protected areas. The space available for reserves is limited, however, and conservation efforts must increasingly consider how management of protected areas can promote biodiversity beyond reserve borders. Habitat corridors are considered an important feature of reserves because they facilitate movement of organisms between patches, thereby increasing species richness in those patches. Here we demonstrate that by increasing species richness inside target patches, corridors additionally benefit biodiversity in surrounding non-target habitat, a biodiversity "spillover" effect. Working in the world's largest corridor experiment, we show that increased richness extends for approximately 30% of the width of the 1-ha connected patches, resulting in 10-18% more vascular plant species around patches of target habitat connected by corridors than around unconnected but otherwise equivalent patches of habitat. Furthermore, corridor-enhanced spillover into non-target habitat can be predicted by a simple plant life-history trait: seed dispersal mode. Species richness of animal-dispersed plants in non-target habitat increased in response to connectivity provided by corridors, whereas species richness of wind-dispersed plants was unaffected by connectivity and increased in response to changes in patch shape--higher edge-to-interior ratio--created by corridors. Corridors promoted biodiversity spillover for native species of the threatened longleaf pine ecosystem being restored in our experiment, but not for exotic species. By extending economically driven spillover concepts from marine fisheries and crop pollination systems, we show how reconnecting landscapes amplifies biodiversity conservation both within and beyond reserve borders.

  12. Spatial assessment of landscape ecological connectivity in different urban gradient.

    PubMed

    Park, Sohyun

    2015-07-01

    Urbanization has resulted in remnant natural patches within cities that often have no connectivity among themselves and to natural reserves outside the urban area. Protecting ecological connectivity in fragmented urban areas is becoming crucial in maintaining urban biodiversity and securing critical habitat levels and configurations under continual development pressures. Nevertheless, few studies have been undertaken for urban landscapes. This study aims to assess ecological connectivity for a group of species that represent the urban desert landscape in the Phoenix metropolitan area and to compare the connectivity values along the different urban gradient. A GIS-based landscape connectivity model which relies upon ecological connectivity index (ECI) was developed and applied to this region. A GIS-based concentric buffering technique was employed to delineate conceptual boundaries for urban, suburban, and rural zones. The research findings demonstrated that urban habitats and potential habitat patches would be significantly influenced by future urban development. Particularly, the largest loss of higher connectivity would likely to be anticipated in the "in-between areas" where urban, suburban, and rural zones overlap one another. The connectivity maps would be useful to provide spatial identification regarding connectivity patterns and vulnerability for urban and suburban activities in this area. This study provides planners and landscape architects with a spatial guidance to minimize ecological fragmentation, which ultimately leads to urban landscape sustainability. This study suggests that conventional planning practices which disregard the ecological processes in urban landscapes need to integrate landscape ecology into planning and design strategies.

  13. TRANSITIONS IN FOREST FRAGMENTATION: IMPLICATIONS FOR RESTORATION OPPORTUNITIES AT REGIONAL SCALES

    EPA Science Inventory

    Where the potential natural vegetation is continuous forest (e.g., eastern US), a region can be divided into smaller units (e.g., counties, watersheds), and a graph of the proportion of forest in the largest patch versus the proportion in anthropogenic cover can be used as an ind...

  14. Peace (of Mind) in Our Time

    ERIC Educational Resources Information Center

    Panettieri, Joseph C.

    2007-01-01

    There's no silver bullet to information security; universities must continue to keep their antivirus, anti-spyware, firewall, and patch management systems in good working order. These days, the largest target for hackers appears to be university databases. Now, universities are searching for new solutions to safeguard those systems. This article…

  15. Spatial and seasonal patterns in stream water contamination across mountainous watersheds: Linkage with landscape characteristics

    NASA Astrophysics Data System (ADS)

    Ai, L.; Shi, Z. H.; Yin, W.; Huang, X.

    2015-04-01

    Landscape characteristics are widely accepted as strongly influencing stream water quality in heterogeneous watersheds. Understanding the relationships between landscape and specific water contaminant can greatly improve the predictability of potential contamination and the assessment of contaminant export. In this work, we examined the combined effects of watershed complexity, in terms of land use and physiography, on specific water contaminant across watersheds close to the Danjiangkou Reservoir. The land use composition, land use pattern, morphometric variables and soil properties were calculated at the watershed scale and considered potential factors of influence. Due to high co-dependence of these watershed characteristics, partial least squares regression was used to elucidate the linkages between some specific water contaminants and the 16 selected watershed characteristic variables. Water contaminant maps revealed spatial and seasonal heterogeneity. The dissolved oxygen values in the dry season were higher than those in the wet season, whereas the other contaminant concentrations displayed the opposite trend. The studied watersheds which are influenced strongly by urbanization, showed higher levels of ammonia nitrogen, total phosphorus, potassium permanganate index and petroleum, and lower levels of dissolved oxygen. The urban land use, largest patch index and the hypsometric integral were the dominant factors affecting specific water contaminant.

  16. Process-Driven Ecological Modeling for Landscape Change Analysis

    NASA Astrophysics Data System (ADS)

    Altman, S.; Reif, M. K.; Swannack, T. M.

    2013-12-01

    Landscape pattern is an important driver in ecosystem dynamics and can control system-level functions such as nutrient cycling, connectivity, biodiversity and carbon sequestration. However, the links between process, pattern and function remain ambiguous. Understanding the quantitative relationship between ecological processes and landscape pattern across temporal and spatial scales is vital for successful management and implementation of ecosystem-level projects. We used remote sensing imagery to develop critical landscape metrics to understand the factors influencing landscape change. Our study area, a coastal area in southwest Florida, is highly dynamic with critically eroding beaches and a range of natural and developed land cover types. Hurricanes in 2004 and 2005 caused a breach along the coast of North Captiva Island that filled in by 2010. We used a time series of light detection and ranging (lidar) elevation data and hyperspectral imagery from 2006 and 2010 to determine land cover changes. Landscape level metrics used included: Largest Patch Index, Class Area, Area-weighted mean area, Clumpiness, Area-weighted Contiguity Index, Number of Patches, Percent of landcover, Area-weighted Shape. Our results showed 1) 27% increase in sand/soil class as the channel repaired itself and shoreline was reestablished, 2) 40% decrease in the mudflat class area due to conversion to sand/soil and water, 3) 30% increase in non-wetland vegetation class as a result of new vegetation around the repaired channel, and 4) the water class only slightly increased though there was a marked increase in the patch size area. Thus, the smaller channels disappeared with the infilling of the channel, leaving much larger, less complex patches behind the breach. Our analysis demonstrated that quantification of landscape pattern is critical to linking patterns to ecological processes and understanding how both affect landscape change. Our proof of concept indicated that ecological processes can correlate to landscape pattern and that ecosystem function changes significantly as pattern changes. However, the number of links between landscape metrics and ecological processes are highly variable. Extensively studied processes such as biodiversity can be linked to numerous landscape metrics. In contrast, correlations between sediment cycling and landscape pattern have only been evaluated for a limited number of metrics. We are incorporating these data into a relational database linking landscape and ecological patterns, processes and metrics. The database will be used to parameterize site-specific landscape evolution models projecting how landscape pattern will change as a result of future ecosystem restoration projects. The model is a spatially-explicit, grid-based model that projects changes in community composition based on changes in soil elevations. To capture scalar differences in landscape change, local and regional landscape metrics are analyzed at each time step and correlated with ecological processes to determine how ecosystem function changes with scale over time.

  17. The MOAHLFA index of irritant sodium lauryl sulfate reactions: first results of a multicentre study on routine sodium lauryl sulfate patch testing.

    PubMed

    Uter, Wolfgang; Geier, Johannes; Becker, Detlef; Brasch, Jochen; Löffler, Harald

    2004-01-01

    In a multicentre study of the German Contact Dermatitis Research Group, sodium lauryl sulfate (SLS) 0.25% and 0.5% aq. has been added to routine allergen patch tests to assess its properties as a convenient diagnostic indicator of individual susceptibility to irritation at the time of patch testing. Previous studies indicated that irritant SLS reactivity may be related to individual factors such as age and sex. As these factors are, in turn, among the important predictors of contact allergy to many allergens, e.g. summarized in the 'MOAHLFA index', the impact of the MOAHLFA factors on irritant SLS patch test reactivity, and thus a potential for confounding, was assessed in the 5971 participating patients. As a result of 2 logistic regression analyses with an irritant reaction to 0.25% and 0.5% SLS, respectively, as outcome, male sex was identified as a relatively weak but significant risk factor (OR 1.38), while age 40 years or older was an even weaker risk factor (OR 1.22 and 1.15, respectively). Upon detailed analysis, no clear age gradient could, however, be identified. 1-day exposure time almost halved the odds of an irritant SLS reaction. In conclusion, this type of SLS patch test can be regarded as robust, indicating individual irritability relatively independent from the individual factors analysed here.

  18. Azithromycin buccal patch in treatment of chronic periodontitis.

    PubMed

    Latif, Sajith Abdul; Vandana, K L; Thimmashetty, J; Dalvi, Priyanka Jairaj

    2016-01-01

    This study aims to explore the clinical, microbiological, and biochemical impact of azithromycin (AZM) buccal patch in chronic generalized patients as a monotherapy as well as an adjunct to nonsurgical therapy. A parallel design was used forty periodontitis patients were randomly allocated into five groups, namely Group 1 scaling root planing (SRP) alone, Group 2 (SRP + AZM patch group), Group 3 (SRP + AZM tablet group), Group 4 (AZM patch monotherapy), and Group 5 (AZM tablet as monotherapy). Plaque index, gingival bleeding index, modified gingival index, probing pocket depth (PPD), and clinical attachment level (CAL) were assessed at baseline and 21 and 90 days. Subgingival pooled plaque sample was collected to assess periodontopathogens like Porphyromonas gingivalis and Prevotella intermedia (Pi) by anaerobic culture method. Tumor necrosis factor alpha (TNF-α) was also evaluated at baseline and 21 days. Periodontal maintenance was performed in Group 1 until 90(th) day, and clinical parameter was assessed at the end of 90(th) day. SRP + AZM tablets showed greater reduction in clinical parameters (P < 0.05) AZM as monotherapy did not offer clinical benefits over SRP. Baseline data were compared at the end, i.e., 90(th) day a significant reduction in plaque scores, gingival bleeding, and PPD was observed however no significant gain in the clinical attachment was observed. The monotherapy resulted in no improvement of periodontal parameters, microbial parameters, and TNF-α level. It is safe to use AZM + SRP as a mode of nonsurgical treatment in periodontitis patients.

  19. Azithromycin buccal patch in treatment of chronic periodontitis

    PubMed Central

    Latif, Sajith Abdul; Vandana, K. L.; Thimmashetty, J.; Dalvi, Priyanka Jairaj

    2016-01-01

    Aim: This study aims to explore the clinical, microbiological, and biochemical impact of azithromycin (AZM) buccal patch in chronic generalized patients as a monotherapy as well as an adjunct to nonsurgical therapy. Materials and Methods: A parallel design was used forty periodontitis patients were randomly allocated into five groups, namely Group 1 scaling root planing (SRP) alone, Group 2 (SRP + AZM patch group), Group 3 (SRP + AZM tablet group), Group 4 (AZM patch monotherapy), and Group 5 (AZM tablet as monotherapy). Plaque index, gingival bleeding index, modified gingival index, probing pocket depth (PPD), and clinical attachment level (CAL) were assessed at baseline and 21 and 90 days. Subgingival pooled plaque sample was collected to assess periodontopathogens like Porphyromonas gingivalis and Prevotella intermedia (Pi) by anaerobic culture method. Tumor necrosis factor alpha (TNF-α) was also evaluated at baseline and 21 days. Periodontal maintenance was performed in Group 1 until 90th day, and clinical parameter was assessed at the end of 90th day. Results: SRP + AZM tablets showed greater reduction in clinical parameters (P < 0.05) AZM as monotherapy did not offer clinical benefits over SRP. Baseline data were compared at the end, i.e., 90th day a significant reduction in plaque scores, gingival bleeding, and PPD was observed however no significant gain in the clinical attachment was observed. Conclusion: The monotherapy resulted in no improvement of periodontal parameters, microbial parameters, and TNF-α level. It is safe to use AZM + SRP as a mode of nonsurgical treatment in periodontitis patients. PMID:27127325

  20. Pediatric Contact Dermatitis Registry Inaugural Case Data.

    PubMed

    Goldenberg, Alina; Mousdicas, Nico; Silverberg, Nanette; Powell, Douglas; Pelletier, Janice L; Silverberg, Jonathan I; Zippin, Jonathan; Fonacier, Luz; Tosti, Antonella; Lawley, Leslie; Wu Chang, Mary; Scheman, Andrew; Kleiner, Gary; Williams, Judith; Watsky, Kalman; Dunnick, Cory A; Frederickson, Rachel; Matiz, Catalina; Chaney, Keri; Estes, Tracy S; Botto, Nina; Draper, Michelle; Kircik, Leon; Lugo-Somolinos, Aida; Machler, Brian; Jacob, Sharon E

    2016-01-01

    Little is known about the epidemiology of allergic contact dermatitis (ACD) in US children. More widespread diagnostic confirmation through epicutaneous patch testing is needed. The aim was to quantify patch test results from providers evaluating US children. The study is a retrospective analysis of deidentified patch test results of children aged 18 years or younger, entered by participating providers in the Pediatric Contact Dermatitis Registry, during the first year of data collection (2015-2016). One thousand one hundred forty-two cases from 34 US states, entered by 84 providers, were analyzed. Sixty-five percent of cases had one or more positive patch test (PPT), with 48% of cases having 1 or more relevant positive patch test (RPPT). The most common PPT allergens were nickel (22%), fragrance mix I (11%), cobalt (9.1%), balsam of Peru (8.4%), neomycin (7.2%), propylene glycol (6.8%), cocamidopropyl betaine (6.4%), bacitracin (6.2%), formaldehyde (5.7%), and gold (5.7%). This US database provides multidisciplinary information on pediatric ACD, rates of PPT, and relevant RPPT reactions, validating the high rates of pediatric ACD previously reported in the literature. The registry database is the largest comprehensive collection of US-only pediatric patch test cases on which future research can be built. Continued collaboration between patients, health care providers, manufacturers, and policy makers is needed to decrease the most common allergens in pediatric consumer products.

  1. Triton - Detail of Dark and Light Material

    NASA Image and Video Library

    1996-09-26

    NASA's Voyager 2 acquired this black and white image of Triton, Neptune's largest satellite, during the night of Aug. 24-25, 1989. Triton's limb cuts obliquely across the middle of the image. The field of view is about 1,000 km (600 miles) across. Three irregular dark areas, surrounded by brighter material, dominate the image. Low-lying material with intermediate albedo occupies the central area, and fresh craters occur along the right margin. Sub-parallel alignment of linear patches of dark material shown in the lower and left part of the image suggests that the patches are structurally controlled. http://photojournal.jpl.nasa.gov/catalog/PIA00056

  2. The Role of River Morphodynamic Disturbance and Groundwater Hydrology As Driving Factors of Riparian Landscape Patterns in Mediterranean Rivers.

    PubMed

    Rivaes, Rui; Pinheiro, António N; Egger, Gregory; Ferreira, Teresa

    2017-01-01

    Fluvial disturbances, especially floods and droughts, are the main drivers of the successional patterns of riparian vegetation. Those disturbances control the riparian landscape dynamics through the direct interaction between flow and vegetation. The main aim of this work is to investigate the specific paths by which fluvial disturbances, distributed by its components of groundwater hydrology (grndh) and morphodynamic disturbance (mrphd), drive riparian landscape patterns as characterized by the location (position in the river corridor) and shape (physical form of the patch) of vegetation patches in Mediterranean rivers. Specifically, this work assesses how the different components of fluvial disturbances affect these features in general and particularly in each succession phase of riparian vegetation. grndh and mrphd were defined by time and intensity weighted indexes calculated, respectively, from the mean annual water table elevations and the annual maximum instantaneous discharge shear stresses of the previous decade. The interactions between riparian landscape features and fluvial disturbances were assessed by confirmatory factor analysis using structural equation modeling. Two hypothetical models for patch location and shape were conceptualized and tested against empirical data collected from 220 patches at four different study sites. Both models were successfully fitted, meaning that they adequately depicted the relationships between the variables. Furthermore, the models achieved a good adjustment for the observed data, based on the evaluation of several approximate fit indexes. The patch location model explained approximately 80% of the patch location variability, demonstrating that the location of the riparian patches is primarily driven by grndh, while the mrphd had very little effect on this feature. In a multigroup analysis regarding the succession phases of riparian vegetation, the fitted model explained more than 68% of the variance of the data, confirming the results of the general model. The patch shape model explained nearly 13% of the patch shape variability, in which the disturbances came to have less influence on driving this feature. However, grndh continues to be the primary driver of riparian vegetation between the two disturbance factors, despite the proportional increase of the mrphd effect to approximately a third of the grndh effect.

  3. The Role of River Morphodynamic Disturbance and Groundwater Hydrology As Driving Factors of Riparian Landscape Patterns in Mediterranean Rivers

    PubMed Central

    Rivaes, Rui; Pinheiro, António N.; Egger, Gregory; Ferreira, Teresa

    2017-01-01

    Fluvial disturbances, especially floods and droughts, are the main drivers of the successional patterns of riparian vegetation. Those disturbances control the riparian landscape dynamics through the direct interaction between flow and vegetation. The main aim of this work is to investigate the specific paths by which fluvial disturbances, distributed by its components of groundwater hydrology (grndh) and morphodynamic disturbance (mrphd), drive riparian landscape patterns as characterized by the location (position in the river corridor) and shape (physical form of the patch) of vegetation patches in Mediterranean rivers. Specifically, this work assesses how the different components of fluvial disturbances affect these features in general and particularly in each succession phase of riparian vegetation. grndh and mrphd were defined by time and intensity weighted indexes calculated, respectively, from the mean annual water table elevations and the annual maximum instantaneous discharge shear stresses of the previous decade. The interactions between riparian landscape features and fluvial disturbances were assessed by confirmatory factor analysis using structural equation modeling. Two hypothetical models for patch location and shape were conceptualized and tested against empirical data collected from 220 patches at four different study sites. Both models were successfully fitted, meaning that they adequately depicted the relationships between the variables. Furthermore, the models achieved a good adjustment for the observed data, based on the evaluation of several approximate fit indexes. The patch location model explained approximately 80% of the patch location variability, demonstrating that the location of the riparian patches is primarily driven by grndh, while the mrphd had very little effect on this feature. In a multigroup analysis regarding the succession phases of riparian vegetation, the fitted model explained more than 68% of the variance of the data, confirming the results of the general model. The patch shape model explained nearly 13% of the patch shape variability, in which the disturbances came to have less influence on driving this feature. However, grndh continues to be the primary driver of riparian vegetation between the two disturbance factors, despite the proportional increase of the mrphd effect to approximately a third of the grndh effect. PMID:28979278

  4. Mucoadhesive buccal patches based on interpolymer complexes of chitosan–pectin for delivery of carvedilol

    PubMed Central

    Kaur, Amanpreet; Kaur, Gurpreet

    2011-01-01

    The study was designed to develop bioadhesive patches of carvedilol hydrochloride using chitosan (CH) and pectin (PE) interpolymer complexes and to systematically evaluate their in vitro and in vivo performances. Mucoadhesive buccal patches of carvedilol were prepared using solvent casting method. The physicochemical interaction between CH and PE was investigated by FTIR and DSC studies. The patches were evaluated for their physical characteristics like mass variation, content uniformity, folding endurance, ex vivo mucoadhesion strength, ex vivo mucoadhesion time, surface pH, in vitro drug release, in situ release study, and in vivo bioavailability study. The swelling index of the patches was found to be proportional to the PE concentration. The surface pH of all the formulated bioadhesive patches was found to lie between 6.2 and 7.2. The optimized bioadhesive patch (C1, CH:PE 20:80) showed bioadhesive strength of 22.10 ± 0.20 g, in vitro release of 98.73% and ex vivo mucoadhesion time of 451 min with in a period of 8 h. The optimized patch demonstrated good in vitro and in vivo results. The buccal delivery of carvedilol in rabbits showed a significant improvement in bioavailability of carvedilol from patches when compared to oral route. PMID:23960773

  5. Mucoadhesive buccal patches based on interpolymer complexes of chitosan-pectin for delivery of carvedilol.

    PubMed

    Kaur, Amanpreet; Kaur, Gurpreet

    2012-01-01

    The study was designed to develop bioadhesive patches of carvedilol hydrochloride using chitosan (CH) and pectin (PE) interpolymer complexes and to systematically evaluate their in vitro and in vivo performances. Mucoadhesive buccal patches of carvedilol were prepared using solvent casting method. The physicochemical interaction between CH and PE was investigated by FTIR and DSC studies. The patches were evaluated for their physical characteristics like mass variation, content uniformity, folding endurance, ex vivo mucoadhesion strength, ex vivo mucoadhesion time, surface pH, in vitro drug release, in situ release study, and in vivo bioavailability study. The swelling index of the patches was found to be proportional to the PE concentration. The surface pH of all the formulated bioadhesive patches was found to lie between 6.2 and 7.2. The optimized bioadhesive patch (C1, CH:PE 20:80) showed bioadhesive strength of 22.10 ± 0.20 g, in vitro release of 98.73% and ex vivo mucoadhesion time of 451 min with in a period of 8 h. The optimized patch demonstrated good in vitro and in vivo results. The buccal delivery of carvedilol in rabbits showed a significant improvement in bioavailability of carvedilol from patches when compared to oral route.

  6. Automated Coarse Registration of Point Clouds in 3d Urban Scenes Using Voxel Based Plane Constraint

    NASA Astrophysics Data System (ADS)

    Xu, Y.; Boerner, R.; Yao, W.; Hoegner, L.; Stilla, U.

    2017-09-01

    For obtaining a full coverage of 3D scans in a large-scale urban area, the registration between point clouds acquired via terrestrial laser scanning (TLS) is normally mandatory. However, due to the complex urban environment, the automatic registration of different scans is still a challenging problem. In this work, we propose an automatic marker free method for fast and coarse registration between point clouds using the geometric constrains of planar patches under a voxel structure. Our proposed method consists of four major steps: the voxelization of the point cloud, the approximation of planar patches, the matching of corresponding patches, and the estimation of transformation parameters. In the voxelization step, the point cloud of each scan is organized with a 3D voxel structure, by which the entire point cloud is partitioned into small individual patches. In the following step, we represent points of each voxel with the approximated plane function, and select those patches resembling planar surfaces. Afterwards, for matching the corresponding patches, a RANSAC-based strategy is applied. Among all the planar patches of a scan, we randomly select a planar patches set of three planar surfaces, in order to build a coordinate frame via their normal vectors and their intersection points. The transformation parameters between scans are calculated from these two coordinate frames. The planar patches set with its transformation parameters owning the largest number of coplanar patches are identified as the optimal candidate set for estimating the correct transformation parameters. The experimental results using TLS datasets of different scenes reveal that our proposed method can be both effective and efficient for the coarse registration task. Especially, for the fast orientation between scans, our proposed method can achieve a registration error of less than around 2 degrees using the testing datasets, and much more efficient than the classical baseline methods.

  7. Design of metamirrors for linear to circular polarization conversion with super-octave bandwidth

    NASA Astrophysics Data System (ADS)

    Fartookzadeh, Mahdi

    2017-10-01

    In this paper, bandwidth improvement of reflection-mode linear to circular polarization converters (RMCPs) is studied. The proposed RMCP is based on multi-layer rectangular patches. Equivalent transmission line circuit of multi-layer reflection-mode polarization converters is used for designing the proposed metamirror. In addition, the approximate equation of axial ratio (AR) of the reflected wave is obtained from the structures containing rectangular patches on each layer. Polarization converters containing multi-layer rectangular patches can be utilized for different ranges of frequencies. However, the frequency range of 2-8 THz is considered in this paper without losing generality. The incident wave is assumed to be linearly polarized with 45° polarization angle. AR equation is used for initial optimization of the dimensions of rectangular patches to obtain the widest possible bandwidth of RMCPs with two- and three-layer patches. Secondary optimization is applied after specifying largest dimensions of the unit cell and excluding them from the variables of optimization. Finally, modified dimensions of the three-layer RMCP are obtained using parametrical study in simulations. The proposed three-layer polarization converter has the 3 dB axial ratio bandwidth of more than 116% and the permitted incident angle of higher than 25°.

  8. STS-57 OV-105's payload bay (PLB) with Earth observation of Namib Desert

    NASA Technical Reports Server (NTRS)

    1993-01-01

    STS-57 Earth observation taken aboard Endeavour, Orbiter Vehicle (OV) 105, is of the coast of the Namib Desert. This northeast-looking view shows the distinctive yellow, parallel dunes of the Namib Sand Sea in the foreground under OV-105's tail. The largest harbor on the Atlantic coast is Walvis Bay. A small piece of south African territory surrounded by the newly independent country, Walvis Bay is Namibia's major port. On the dune-free flats directly inland from Walvis Bay, large reserves of near-surface uranium have been discovered. The world's largest open-pit uranium mine, the Rossing Mine, has attracted workers from all parts of Namibia. Of special interest for this mission is the unusual occurrence of blowing dust offshore (orange patch over the sea). In what was a mission dominated by episodes of blowing dust, this is another example showing how windy the Earth is at present. This large view from a higher-than-usual altitude includes the large oval patch of the Etosha dry lake n

  9. Vector-borne disease risk indexes in spatially structured populations

    PubMed Central

    Anzo-Hernández, Andrés; Bonilla-Capilla, Beatriz; Soto-Bajo, Moisés; Fraguela-Collar, Andrés

    2018-01-01

    There are economic and physical limitations when applying prevention and control strategies for urban vector borne diseases. Consequently, there are increasing concerns and interest in designing efficient strategies and regulations that health agencies can follow in order to reduce the imminent impact of viruses like Dengue, Zika and Chikungunya. That includes fumigation, abatization, reducing the hatcheries, picking up trash, information campaigns. A basic question that arise when designing control strategies is about which and where these ones should focus. In other words, one would like to know whether preventing the contagion or decrease vector population, and in which area of the city, is more efficient. In this work, we propose risk indexes based on the idea of secondary cases from patch to patch. Thus, they take into account human mobility and indicate which patch has more chance to be a corridor for the spread of the disease and which is more vulnerable, i.e. more likely to have cases?. They can also indicate the neighborhood where hatchery control will reduce more the number of potential cases. In order to illustrate the usefulness of these indexes, we run a set of numerical simulations in a mathematical model that takes into account the urban mobility and the differences in population density among the areas of a city. If we label by i a particular neighborhood, the transmission risk index (TRi) measures the potential secondary cases caused by a host in that neighborhood. The vector transmission risk index (VTRi) measures the potential secondary cases caused by a vector. Finally, the vulnerability risk index (VRi) measures the potential secondary cases in the neighborhood. Transmission indexes can be used to give geographical priority to some neighborhoods when applying prevention and control measures. On the other hand, the vulnerability index can be useful to implement monitoring campaigns or public health investment. PMID:29432455

  10. [Impact of traditionally managed forest units on the landscape connectivity of Sierra de Los Tuxtlas, Mexico].

    PubMed

    Aguilar Vásquez, Yunin; Aliphat Fernández, Mario Manuel; Caso Barrera, Laura; Del Amo Rodríguez, Silvia; Sánchez Gómez, Maria De Lourdes; Martínez-Carrera, Daniel

    2014-09-01

    The ever-increasing establishment of landscape mosaics is expressed as a surrounding matrix of agricultural activities, which frames patches or remnants of the original vegetation cover. Conservation actions should be aimed to establish or to increase those interactive systems, which help to maintain the land- scape flow through linkages. Spaces occupied by traditional management systems retain and support this func- tion. In this paper, we used Geographic Information Systems to evaluate the importance of traditionally managed forest units ('acahuales'-coffee plantations) and to assess landscape connectivity in the indigenous Popoluca area of Sierra de los Tuxtlas, Mexico. The cartographic material used to establish the types of vegetation and their coverture included the period 1991-2008. At landscape level, four indices were used to assess the general situation of the habitat network, and to identify the patches of high priority. Individually, indices evaluated if patches were important for their area, their potential flow or their connecting function. Results showed that the landscape is functioning as a single system, but having low connectivity. Values improved when traditionally managed forest patches were considered as viable habitat. We detected 367 patches of very high priority, 80% belonging to forests managed traditionally. Patches were important for their potential flow (size and topologi- cal relationships). Only 70 patches were significant for their function as biological corridors between largest forests located at the top of the volcanoes, and are mostly managed forest (75%). We concluded that the units of traditionally managed forest play a significant role in landscape connectivity maintenance.

  11. Multiconjugate adaptive optics applied to an anatomically accurate human eye model.

    PubMed

    Bedggood, P A; Ashman, R; Smith, G; Metha, A B

    2006-09-04

    Aberrations of both astronomical telescopes and the human eye can be successfully corrected with conventional adaptive optics. This produces diffraction-limited imagery over a limited field of view called the isoplanatic patch. A new technique, known as multiconjugate adaptive optics, has been developed recently in astronomy to increase the size of this patch. The key is to model atmospheric turbulence as several flat, discrete layers. A human eye, however, has several curved, aspheric surfaces and a gradient index lens, complicating the task of correcting aberrations over a wide field of view. Here we utilize a computer model to determine the degree to which this technology may be applied to generate high resolution, wide-field retinal images, and discuss the considerations necessary for optimal use with the eye. The Liou and Brennan schematic eye simulates the aspheric surfaces and gradient index lens of real human eyes. We show that the size of the isoplanatic patch of the human eye is significantly increased through multiconjugate adaptive optics.

  12. Discriminating anisometropic amblyopia from myopia based on interocular inhibition

    PubMed Central

    Jia, Wuli; Zhou, Jiawei; Lu, Zhong-Lin; Lesmes, Luis A.; Huang, Chang-Bing

    2016-01-01

    Amblyopia screening during childhood is critical for early detection and successful treatment. In the current study, we develop and evaluate a screening method that exploits the imbalanced interocular inhibition between amblyopic and fellow eyes. In nineteen subjects with anisometropic amblyopia and twenty-two age-matched subjects with myopia, we measured the area under the contrast sensitivity functions (AUCSFs) in eight monocular conditions defined by tested eye (left, right), patching of the untested eye (translucent, opaque), and refractive status (corrected, uncorrected). For each test eye, we defined the inhibition index as the ratio between AUCSF values obtained in the translucent and opaque patching conditions of the untested eye. To evaluate the screening potential of the inhibition index, we compared results from patients with amblyopia and myopia. With and without optical correction, the index was significantly lower in the amblyopic eye than in the fellow eye of the amblyopic subjects and both eyes of the myopic subjects. No significant difference was found among the two eyes of the myopic subjects and the fellow eyes of the amblyopic subjects. With the inhibition index as the predictor, a logistic regression model successfully discriminated amblyopic eyes from myopic eyes with 100% accuracy in the uncorrected condition. In the corrected condition, with the inhibition index and interocular visual acuity difference as predictors, amblyopic eyes were likewise discriminated from myopic eyes with 100% accuracy. This pattern of CSF changes, caused by the different patching modes of the untested eye, provides a potential CSF signature to discriminate anisometropic amblyopia from myopia. PMID:25701741

  13. A metapopulation approach to African lion (Panthera leo) conservation.

    PubMed

    Dolrenry, Stephanie; Stenglein, Jennifer; Hazzah, Leela; Lutz, R Scott; Frank, Laurence

    2014-01-01

    Due to anthropogenic pressures, African lion (Panthera leo) populations in Kenya and Tanzania are increasingly limited to fragmented populations. Lions living on isolated habitat patches exist in a matrix of less-preferred habitat. A framework of habitat patches within a less-suitable matrix describes a metapopulation. Metapopulation analysis can provide insight into the dynamics of each population patch in reference to the system as a whole, and these analyses often guide conservation planning. We present the first metapopulation analysis of African lions. We use a spatially-realistic model to investigate how sex-biased dispersal abilities of lions affect patch occupancy and also examine whether human densities surrounding the remaining lion populations affect the metapopulation as a whole. Our results indicate that male lion dispersal ability strongly contributes to population connectivity while the lesser dispersal ability of females could be a limiting factor. When populations go extinct, recolonization will not occur if distances between patches exceed female dispersal ability or if females are not able to survive moving across the matrix. This has profound implications for the overall metapopulation; the female models showed an intrinsic extinction rate from five-fold to a hundred-fold higher than the male models. Patch isolation is a consideration for even the largest lion populations. As lion populations continue to decline and with local extinctions occurring, female dispersal ability and the proximity to the nearest lion population are serious considerations for the recolonization of individual populations and for broader conservation efforts.

  14. A Metapopulation Approach to African Lion (Panthera leo) Conservation

    PubMed Central

    Dolrenry, Stephanie; Stenglein, Jennifer; Hazzah, Leela; Lutz, R. Scott; Frank, Laurence

    2014-01-01

    Due to anthropogenic pressures, African lion (Panthera leo) populations in Kenya and Tanzania are increasingly limited to fragmented populations. Lions living on isolated habitat patches exist in a matrix of less-preferred habitat. A framework of habitat patches within a less-suitable matrix describes a metapopulation. Metapopulation analysis can provide insight into the dynamics of each population patch in reference to the system as a whole, and these analyses often guide conservation planning. We present the first metapopulation analysis of African lions. We use a spatially-realistic model to investigate how sex-biased dispersal abilities of lions affect patch occupancy and also examine whether human densities surrounding the remaining lion populations affect the metapopulation as a whole. Our results indicate that male lion dispersal ability strongly contributes to population connectivity while the lesser dispersal ability of females could be a limiting factor. When populations go extinct, recolonization will not occur if distances between patches exceed female dispersal ability or if females are not able to survive moving across the matrix. This has profound implications for the overall metapopulation; the female models showed an intrinsic extinction rate from five-fold to a hundred-fold higher than the male models. Patch isolation is a consideration for even the largest lion populations. As lion populations continue to decline and with local extinctions occurring, female dispersal ability and the proximity to the nearest lion population are serious considerations for the recolonization of individual populations and for broader conservation efforts. PMID:24505385

  15. Species survival and scaling laws in hostile and disordered environments

    NASA Astrophysics Data System (ADS)

    Rocha, Rodrigo P.; Figueiredo, Wagner; Suweis, Samir; Maritan, Amos

    2016-10-01

    In this work we study the likelihood of survival of single-species in the context of hostile and disordered environments. Population dynamics in this environment, as modeled by the Fisher equation, is characterized by negative average growth rate, except in some random spatially distributed patches that may support life. In particular, we are interested in the phase diagram of the survival probability and in the critical size problem, i.e., the minimum patch size required for surviving in the long-time dynamics. We propose a measure for the critical patch size as being proportional to the participation ratio of the eigenvector corresponding to the largest eigenvalue of the linearized Fisher dynamics. We obtain the (extinction-survival) phase diagram and the probability distribution function (PDF) of the critical patch sizes for two topologies, namely, the one-dimensional system and the fractal Peano basin. We show that both topologies share the same qualitative features, but the fractal topology requires higher spatial fluctuations to guarantee species survival. We perform a finite-size scaling and we obtain the associated scaling exponents. In addition, we show that the PDF of the critical patch sizes has an universal shape for the 1D case in terms of the model parameters (diffusion, growth rate, etc.). In contrast, the diffusion coefficient has a drastic effect on the PDF of the critical patch sizes of the fractal Peano basin, and it does not obey the same scaling law of the 1D case.

  16. Deep radiomic prediction with clinical predictors of the survival in patients with rheumatoid arthritis-associated interstitial lung diseases

    NASA Astrophysics Data System (ADS)

    Nasirudina, Radin A.; Näppi, Janne J.; Watari, Chinatsu; Matsuhiro, Mikio; Hironaka, Toru; Kido, Shoji; Yoshida, Hiroyuki

    2018-02-01

    We developed and evaluated the effect of our deep-learning-derived radiomic features, called deep radiomic features (DRFs), together with their combination with clinical predictors, on the prediction of the overall survival of patients with rheumatoid arthritis-associated interstitial lung disease (RA-ILD). We retrospectively identified 70 RA-ILD patients with thin-section lung CT and pulmonary function tests. An experienced observer delineated regions of interest (ROIs) from the lung regions on the CT images, and labeled them into one of four ILD patterns (ground-class opacity, reticulation, consolidation, and honeycombing) or a normal pattern. Small image patches centered at individual pixels on these ROIs were extracted and labeled with the class of the ROI to which the patch belonged. A deep convolutional neural network (DCNN), which consists of a series of convolutional layers for feature extraction and a series of fully connected layers, was trained and validated with 5-fold cross-validation for classifying the image patches into one of the above five patterns. A DRF vector for each patch was identified as the output of the last convolutional layer of the DCNN. Statistical moments of each element of the DRF vectors were computed to derive a DRF vector that characterizes the patient. The DRF vector was subjected to a Cox proportional hazards model with elastic-net penalty for predicting the survival of the patient. Evaluation was performed by use of bootstrapping with 2,000 replications, where concordance index (C-index) was used as a comparative performance metric. Preliminary results on clinical predictors, DRFs, and their combinations thereof showed (a) Gender and Age: C-index 64.8% [95% confidence interval (CI): 51.7, 77.9]; (b) gender, age, and physiology (GAP index): C-index: 78.5% [CI: 70.50 86.51], P < 0.0001 in comparison with (a); (c) DRFs: C-index 85.5% [CI: 73.4, 99.6], P < 0.0001 in comparison with (b); and (d) DRF and GAP: C-index 91.0% [CI: 84.6, 97.2], P < 0.0001 in comparison with (c). Kaplan-Meier survival curves of patients stratified to low- and high-risk groups based on the DRFs showed a statistically significant (P < 0.0001) difference. The DRFs outperform the clinical predictors in predicting patient survival, and a combination of the DRFs and GAP index outperforms either one of these predictors. Our results indicate that the DRFs and their combination with clinical predictors provide an accurate prognostic biomarker for patients with RA-ILD.

  17. Correlates to colonizations of new patches by translocated populations of bighorn sheep

    USGS Publications Warehouse

    Singer, F.J.; Moses, M.E.; Bellew, S.; Sloan, W.

    2000-01-01

    By 1950, bighorn sheep were extirpated from large areas of their range. Most extant populations of bighorn sheep (Ovis canadensis) in the Intermountain West consist of <100 individuals occurring in a fragmented distribution across the landscape. Dispersal and successful colonizations of unoccupied habitat patches has been rarely reported, and, in particular, translocated populations have been characterized by limited population growth and limited dispersal rates. Restoration of the species is greatly assisted by dispersal and successful colonization of new patches within a metapopulation structure versus the existing scenario of negligible dispersal and fragmented, small populations. We investigated the correlates for the rate of colonizations of 79 suitable, but unoccupied, patches by 31 translocated populations of bighorn sheep released into nearby patches of habitat. Population growth rates of bighorn sheep in the release patches were correlated to Ne of the founder group, and early contact with a second released population in a nearby release patch (logistic regression, p = 0.08). Largest population size of all extant released populations in 1994 was correlated to potential Ne of the founder group, the number of different source populations represented in the founder, and early contact with a second released population (p = 0.016). Dispersal rates were 100% higher in rams than ewes (p = 0.001). Successful colonizations of unoccupied patches (n = 24 of 79 were colonized) were associated with rapid growth rates in the released population, years since release, larger area of suitable habitat in the release patch, larger population sizes, and a seasonal migratory tendency in the released population (p = 0.05). Fewer water barriers, more open vegetation and more rugged, broken terrain in the intervening habitat were also associated with colonizations (p = <0.05). We concluded that high dispersal rates and rapid reoccupation of large areas could occur if bighorn sheep are placed in large patches of habitat with few barriers to movements to other patches and with no domestic sheep present. Many restorations in the past that did not meet these criteria may have contributed to an insular population structure of bighorn sheep with limited observations of dispersal.

  18. Correlates to colonizations of new patches by translocated populations of bighorn sheep

    USGS Publications Warehouse

    Singer, F.J.; Moses, M.E.; Bellew, S.; Sloan, W.

    2000-01-01

    By 1950, bighorn sheep were extirpated from large areas of their range. Most extant populations of bighorn sheep (Ovis canadensis) in the Intermountain West consist of <100 individuals occurring in a fragmented distribution across the landscape. Dispersal and successful colonizations of unoccupied habitat patches has been rarely reported, and, in particular, translocated populations have been characterized by limited population growth and limited dispersal rates. Restoration of the species is greatly assisted by dispersal and successful colonization of new patches within a metapopulation structure versus the existing scenario of negligible dispersal and fragmented, small populations. We investigated the correlates for the rate of colonizations of 79 suitable, but unoccupied, patches by 31 translocated populations of bighorn sheep released into nearby patches of habitat. Population growth rates of bighorn sheep in the release patches were correlated to Ne of the founder group, and early contact with a second released population in a nearby release patch (logistic regression, p = 0.08). Largest population size of all extant released populations in 1994 was correlated to potential Ne of the founder group, the number of different source populations represented in the founder, and early contact with a second released population (p = 0.016). Dispersal rates were 100% higher in rams than ewes (p = 0.001). Successful colonizations of unoccupied patches (n = 24 of 79 were colonized) were associated with rapid growth rates in the released population, years since release, larger area of suitable habitat in the release patch, larger population sizes, and a seasonal migratory tendency in the released population (p = 0.05). Fewer water barriers, more open vegetation and more rugged, broken terrain in the intervening habitat were also associated with colonizations (p = <0.05). We concluded that high dispersal rates and rapid reoccupation of large areas could occur if bighorn sheep are placed in large patches of habitat with few barriers to movements to other patches and with no domestic sheep present. Many restorations in the past that did not meet these criteria may have contributed to an insular population structure of bighorn sheep with limited observations of dispersal.

  19. 76 FR 39457 - Self-Regulatory Organizations; Notice of Filing and Immediate Effectiveness of Proposed Rule...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-06

    ...% of the investable U.S. equity market. \\10\\ The Russell 3000 Value Index measures the performance of... largest securities based on a combination of their market cap and current index membership. The Russell... approximately 200 of the largest securities based on a combination of their market cap and current index...

  20. Analyze the Impact of Habitat Patches on Wildlife Road-Kill

    NASA Astrophysics Data System (ADS)

    Seok, S.; Lee, J.

    2015-10-01

    The ecosystem fragmentation due to transportation infrastructure causes a road-kill phenomenon. When making policies for mitigating road-kill it is important to select target-species in order to enhance its efficiency. However, many wildlife crossing structures have been questioned regarding their effectiveness due to lack of considerations such as target-species selection, site selection, management, etc. The purpose of this study is to analyse the impact of habitat patches on wildlife road-kill and to suggest that spatial location of habitat patches should be considered as one of the important factors when making policies for mitigating road-kill. Habitat patches were presumed from habitat variables and a suitability index on target-species that was chosen by literature review. The road-kill hotspot was calculated using Getis-Ord Gi*. After that, we performed a correlation analysis between Gi Z-score and the distance from habitat patches to the roads. As a result, there is a low negative correlation between two variables and it increases the Gi Z-score if the habitat patches and the roads become closer.

  1. An appraisal of the classic forest succession paradigm with the shade tolerance index

    Treesearch

    Jean Lienard; Ionut Florescu; Nikolay Strigul

    2015-01-01

    We revisit the classic theory of forest succession that relates shade tolerance and species replacement and assess its validity to understand patch-mosaic patterns of forested ecosystems of the USA. We introduce a macroscopic parameter called the “shade tolerance index” and compare it to the classic continuum index in southern Wisconsin forests. We exemplify shade...

  2. Metapopulation Dynamics of the Mistletoe and Its Host in Savanna Areas with Different Fire Occurrence

    PubMed Central

    Teodoro, Grazielle Sales; van den Berg, Eduardo; Arruda, Rafael

    2013-01-01

    Mistletoes are aerial hemiparasitic plants which occupy patches of favorable habitat (host trees) surrounded by unfavorable habitat and may be possibly modeled as a metapopulation. A metapopulation is defined as a subdivided population that persists due to the balance between colonization and extinction in discrete habitat patches. Our aim was to evaluate the dynamics of the mistletoe Psittacanthus robustus and its host Vochysia thyrsoidea in three Brazilian savanna areas using a metapopulation approach. We also evaluated how the differences in terms of fire occurrence affected the dynamic of those populations (two areas burned during the study and one was fire protected). We monitored the populations at six-month intervals. P. robustus population structure and dynamics met the expected criteria for a metapopulation: i) the suitable habitats for the mistletoe occur in discrete patches; (ii) local populations went extinct during the study and (iii) colonization of previously non-occupied patches occurred. The ratio of occupied patches decreased in all areas with time. Local mistletoe populations went extinct due to two different causes: patch extinction in area with no fire and fire killing in the burned areas. In a burned area, the largest decrease of occupied patch ratios occurred due to a fire event that killed the parasites without, however, killing the host trees. The greatest mortality of V. thyrsoidea occurred in the area without fire. In this area, all the dead trees supported mistletoe individuals and no mortality was observed for parasite-free trees. Because P. robustus is a fire sensitive species and V. thyrsoidea is fire tolerant, P. robustus seems to increase host mortality, but its effect is lessened by periodic burning that reduces the parasite loads. PMID:23776554

  3. Planar patch clamp: advances in electrophysiology.

    PubMed

    Brüggemann, Andrea; Farre, Cecilia; Haarmann, Claudia; Haythornthwaite, Ali; Kreir, Mohamed; Stoelzle, Sonja; George, Michael; Fertig, Niels

    2008-01-01

    Ion channels have gained increased interest as therapeutic targets over recent years, since a growing number of human and animal diseases have been attributed to defects in ion channel function. Potassium channels are the largest and most diverse family of ion channels. Pharmaceutical agents such as Glibenclamide, an inhibitor of K(ATP) channel activity which promotes insulin release, have been successfully sold on the market for many years. So far, only a small group of the known ion channels have been addressed as potential drug targets. The functional testing of drugs on these ion channels has always been the bottleneck in the development of these types of pharmaceutical compounds.New generations of automated patch clamp screening platforms allow a higher throughput for drug testing and widen this bottleneck. Due to their planar chip design not only is a higher throughput achieved, but new applications have also become possible. One of the advantages of planar patch clamp is the possibility of perfusing the intracellular side of the membrane during a patch clamp experiment in the whole-cell configuration. Furthermore, the extracellular membrane remains accessible for compound application during the experiment.Internal perfusion can be used not only for patch clamp experiments with cell membranes, but also for those with artificial lipid bilayers. In this chapter we describe how internal perfusion can be applied to potassium channels expressed in Jurkat cells, and to Gramicidin channels reconstituted in a lipid bilayer.

  4. Nest success of grassland birds in oak barrens and dry prairies in west central Wisconsin

    USGS Publications Warehouse

    Susan M. Vos,; Ribic, Christine

    2013-01-01

    We investigated nesting success of grassland birds on dry prairie and oak barrens patches embedded within a forested matrix on Fort McCoy Military Installation. We monitored 280 nests of 9 grassland-bird species from mid-May to late July 2000–2002. Pooecetes gramineus (Vesper Sparrow) andAmmodramus savannarum (Grasshopper Sparrow) were the most abundant nesting species. Vesper Sparrow nest densities were highest on smaller grassland patches, while Grasshopper Sparrow nest densities were highest on the largest patches. Probability of fledging at least one young was 0.20 for Vesper Sparrow. For Grasshopper Sparrow, daily nest survival was higher for nests placed away from trees; probability of fledging at least one young was 0.28 for nests away from trees and 0.05 for nests near trees. Maintaining remnant native habitats is important, and management of woody features may help improve habitat quality for some grassland birds in Wisconsin.

  5. 76 FR 53004 - Self-Regulatory Organizations; NYSE Arca, Inc.; Notice of Filing of Proposed Rule Change by NYSE...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-24

    ... approximately 75.4% of the global equity market. The Index includes the largest securities in the Russell... Index represents approximately 75.4% of the global equity market and includes the largest securities in...

  6. A Spatially-Explicit Modeling Approach to Examine the Interaction of Reproductive Traits and Landscape Characteristics on Arctic Shrub Expansion

    NASA Astrophysics Data System (ADS)

    Naito, A. T.; Cairns, D. M.; Feldman, R. M.; Grant, W. E.

    2014-12-01

    Shrub expansion is one of the most recognized components of terrestrial Arctic change. While experimental work has provided valuable insights into its fine-scale drivers and implications, the contribution of shrub reproductive characteristics to their spatial patterns is poorly understood at broader scales. Building upon our previous work in river valleys in northern Alaska, we developed a C#-based spatially-explicit model that simulates historic landscape-scale shrub establishment between the 1970s and the late 2000s on a yearly time-step while accounting for parameters relating to different reproduction modes (clonal development with and without the "mass effect" and short-distance dispersal), as well as the presence and absence of the interaction of hydrologic constraints using the topographic wetness index. We examined these treatments on floodplains, valley slopes, and interfluves in the Ayiyak, Colville, and Kurupa River valleys. After simulating 30 landscape realizations using each parameter combination, we quantified the spatial characteristics (patch density, edge density, patch size variability, area-weighted shape index, area-weighted fractal dimension index, and mean distance between patches) of the resulting shrub patches on the simulation end date using FRAGSTATS. We used Principal Components Analysis to determine which treatments produced spatial characteristics most similar to those observed in the late 2000s. Based upon our results, we hypothesize that historic shrub expansion in northern Alaska has been driven in part by clonal reproduction with the "mass effect" or short-distance dispersal (< 5 m). The interactive effect of hydrologic characteristics, however, is less clear. These hypotheses may then be tested in future work involving field observations. Given the potential that climate change may facilitate a shift from a clonal to a sexual reproductive strategy, this model may facilitate predictions regarding future Arctic vegetation patterns.

  7. Determination of the ecological connectivity between landscape patches obtained using the knowledge engineer (expert) classification technique

    NASA Astrophysics Data System (ADS)

    Selim, Serdar; Sonmez, Namik Kemal; Onur, Isin; Coslu, Mesut

    2017-10-01

    Connection of similar landscape patches with ecological corridors supports habitat quality of these patches, increases urban ecological quality, and constitutes an important living and expansion area for wild life. Furthermore, habitat connectivity provided by urban green areas is supporting biodiversity in urban areas. In this study, possible ecological connections between landscape patches, which were achieved by using Expert classification technique and modeled with probabilistic connection index. Firstly, the reflection responses of plants to various bands are used as data in hypotheses. One of the important features of this method is being able to use more than one image at the same time in the formation of the hypothesis. For this reason, before starting the application of the Expert classification, the base images are prepared. In addition to the main image, the hypothesis conditions were also created for each class with the NDVI image which is commonly used in the vegetation researches. Besides, the results of the previously conducted supervised classification were taken into account. We applied this classification method by using the raster imagery with user-defined variables. Hereupon, to provide ecological connections of the tree cover which was achieved from the classification, we used Probabilistic Connection (PC) index. The probabilistic connection model which is used for landscape planning and conservation studies via detecting and prioritization critical areas for ecological connection characterizes the possibility of direct connection between habitats. As a result we obtained over % 90 total accuracy in accuracy assessment analysis. We provided ecological connections with PC index and we created inter-connected green spaces system. Thus, we offered and implicated green infrastructure system model takes place in the agenda of recent years.

  8. Landscape attributes as drivers of the geographical variation in density of Sapajus nigritus Kerr, 1792, a primate endemic to the Atlantic Forest

    NASA Astrophysics Data System (ADS)

    Hendges, Carla D.; Melo, Geruza L.; Gonçalves, Alberto S.; Cerezer, Felipe O.; Cáceres, Nilton C.

    2017-10-01

    Neotropical primates are among the most well studied forest mammals concerning their population densities. However, few studies have evaluated the factors that influence the spatial variation in the population density of primates, which limits the possibility of inferences towards this animal group, especially at the landscape-level. Here, we compiled density data of Sapajus nigritus from 21 forest patches of the Brazilian Atlantic Forest. We tested the effects of climatic variables (temperature, precipitation), landscape attributes (number of patches, mean inter-patch isolation distance, matrix modification index) and patch size on the population density using linear models and the Akaike information criterion. Our findings showed that the density of S. nigritus is influenced by landscape attributes, particularly by fragmentation and matrix modification. Overall, moderately fragmented landscapes and those surrounded by matrices with intermediate indexes of temporal modification (i.e., crop plantations, forestry) are related to high densities of this species. These results support the assumptions that ecologically flexible species respond positively to forest fragmentation. However, the non-linear relationship between S. nigritus density and number of patches suggests that even the species that are most tolerant to forest cover changes seem to respond positively only at an intermediate level of habitat fragmentation, being dependent of both a moderate degree of forest cover and a high quality matrix. The results we found here can be a common response to fragmentation for those forest dweller species that are able to use the matrix as complementary foraging sites.

  9. A patch-based pseudo-CT approach for MRI-only radiotherapy in the pelvis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Andreasen, Daniel, E-mail: dana@dtu.dk

    Purpose: In radiotherapy based only on magnetic resonance imaging (MRI), knowledge about tissue electron densities must be derived from the MRI. This can be achieved by converting the MRI scan to the so-called pseudo-computed tomography (pCT). An obstacle is that the voxel intensities in conventional MRI scans are not uniquely related to electron density. The authors previously demonstrated that a patch-based method could produce accurate pCTs of the brain using conventional T{sub 1}-weighted MRI scans. The method was driven mainly by local patch similarities and relied on simple affine registrations between an atlas database of the co-registered MRI/CT scan pairsmore » and the MRI scan to be converted. In this study, the authors investigate the applicability of the patch-based approach in the pelvis. This region is challenging for a method based on local similarities due to the greater inter-patient variation. The authors benchmark the method against a baseline pCT strategy where all voxels inside the body contour are assigned a water-equivalent bulk density. Furthermore, the authors implement a parallelized approximate patch search strategy to speed up the pCT generation time to a more clinically relevant level. Methods: The data consisted of CT and T{sub 1}-weighted MRI scans of 10 prostate patients. pCTs were generated using an approximate patch search algorithm in a leave-one-out fashion and compared with the CT using frequently described metrics such as the voxel-wise mean absolute error (MAE{sub vox}) and the deviation in water-equivalent path lengths. Furthermore, the dosimetric accuracy was tested for a volumetric modulated arc therapy plan using dose–volume histogram (DVH) point deviations and γ-index analysis. Results: The patch-based approach had an average MAE{sub vox} of 54 HU; median deviations of less than 0.4% in relevant DVH points and a γ-index pass rate of 0.97 using a 1%/1 mm criterion. The patch-based approach showed a significantly better performance than the baseline water pCT in almost all metrics. The approximate patch search strategy was 70x faster than a brute-force search, with an average prediction time of 20.8 min. Conclusions: The authors showed that a patch-based method based on affine registrations and T{sub 1}-weighted MRI could generate accurate pCTs of the pelvis. The main source of differences between pCT and CT was positional changes of air pockets and body outline.« less

  10. The Kaposi Sarcoma Herpesvirus Latency-associated Nuclear Antigen DNA Binding Domain Dorsal Positive Electrostatic Patch Facilitates DNA Replication and Episome Persistence*

    PubMed Central

    Li, Shijun; Tan, Min; Juillard, Franceline; Ponnusamy, Rajesh; Correia, Bruno; Simas, J. Pedro; Carrondo, Maria A.; McVey, Colin E.; Kaye, Kenneth M.

    2015-01-01

    Kaposi sarcoma-associated herpesvirus (KSHV) has a causative role in several human malignancies. KSHV latency-associated nuclear antigen (LANA) mediates persistence of viral episomes in latently infected cells. LANA mediates KSHV DNA replication and segregates episomes to progeny nuclei. The structure of the LANA DNA binding domain was recently solved, revealing a positive electrostatic patch opposite the DNA binding surface, which is the site of BET protein binding. Here we investigate the functional role of the positive patch in LANA-mediated episome persistence. As expected, LANA mutants with alanine or glutamate substitutions in the central, peripheral, or lateral portions of the positive patch maintained the ability to bind DNA by EMSA. However, all of the substitution mutants were deficient for LANA DNA replication and episome maintenance. Mutation of the peripheral region generated the largest deficiencies. Despite these deficiencies, all positive patch mutants concentrated to dots along mitotic chromosomes in cells containing episomes, similar to LANA. The central and peripheral mutants, but not the lateral mutants, were reduced for BET protein interaction as assessed by co-immunoprecipitation. However, defects in BET protein binding were independent of episome maintenance function. Overall, the reductions in episome maintenance closely correlated with DNA replication deficiencies, suggesting that the replication defects account for the reduced episome persistence. Therefore, the electrostatic patch exerts a key role in LANA-mediated DNA replication and episome persistence and may act through a host cell partner(s) other than a BET protein or by inducing specific structures or complexes. PMID:26420481

  11. 78 FR 47109 - Endangered and Threatened Wildlife and Plants; Endangered Status for Physaria globosa (Short's...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-02

    ... portion of the leaf blade beyond the middle) in shape, with a smooth or slightly wavy margin, and gray... distinguished it from the related H. giganteus by its smooth and hairless stems; narrow, entire leaf blades; and...-meter-wide transect run through the largest patch of whorled sunflower in that area. These 100 stalks...

  12. EFFECT OF HYDROPHILIC AND HYDROPHOBIC POLYMER ON IN VITRO DISSOLUTION AND PERMEATION OF BISOPROLOL FUMARATE THROUGH TRANSDERMAL PATCH.

    PubMed

    Shabbir, Maryam; Ali, Sajid; Raza, Moosa; Sharif, Ali; Akhtar, Furoan Muhammad; Manan, Abdul; Fazli, Ali Raza; Younas, Neelofar; Manzoor, Iqra

    2017-01-01

    A matrix transdermal patch of bisoprolol fumarate was formulated with different concentrations of Eudragit RS 100 and Methocel E5 with PEG 400 as plasticizer by solvent evaporation technique. Tween 80 was added to the optimized patch to evaluate the effect of permeation enhancer at different concentration through the excised rabbit's skin. The patches were analyzed for weight variation, drug content, swelling index, erosion studies, moisture content, moisture uptake, water vapor transmission rate (WVTR) and water vapor permeability (WVP). In vitro dissolution test was carried out in USP dissolution apparatus V to select the optimized formulation. In vitr skin permeation studies were done in Franz diffusion cell using rabbit skin as a model membrane. The cumulative drug release and flux were determined to compare the result of test patches with a control patch. The greatest enhancement ratio (ER) was obtained in F03-PE with 30% Tween 80. F03-PE seemed to follow zero order kinetics with super case II mechanism of drug release. Statistical ANOVA suggested that there was a significant difference in formulations, steady flux and cumulative permeation rate at different Tween 80 concentrations.

  13. 14 CFR 139.325 - Airport emergency plan.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ..., including a communications network; (2) Contain sufficient detail to provide adequate guidance to each... response for the largest air carrier aircraft in the Index group required under § 139.315. (b) The plan... that can be carried on board the largest air carrier aircraft in the Index group required under § 139...

  14. Patterns of primary succession of native and introduced plants in lowland wet forests in eastern Hawaii

    Treesearch

    Naupaka Zimmerman; Flint 1 Hughes; Patrick Hart; Heather Kalei Chang; David Perez; Ryan Kaipoalohaakala Like; Rebecca Ostertag

    2008-01-01

    The majority of Hawaii's lowland wet forests no longer exist, with many of the last remaining patches found on the eastern, windward sides of the largest islands. To better understand successional patterns and invasion in these native systems, we quantified basal area (BA) and densities of woody species and understory cover at nine sites in the Puna district on...

  15. Ovarian activity in obese and nonobese women treated with three transdermal contraceptive patches delivering three different doses of ethinyl estradiol and levonorgestrel.

    PubMed

    Foegh, Marie; Archer, David F; Stanczyk, Frank Z; Rubin, Arkady; Mishell, Daniel R

    2013-02-01

    The effect of obesity on ovarian follicular suppression in women using low-estrogen dose contraceptive patches has not been determined. A Phase II, parallel-group, multicenter, three-cycle study evaluated three patches containing different ethinyl estradiol (EE) and levonorgestrel (LNG) doses. Serum levels of EE, LNG, sex hormone-binding globulin and progesterone were compared in 41 obese [body mass index (BMI) ≥30] and 75 nonobese (BMI <30) women. Suppression of ovulation during the luteal phase was dose dependent, with the highest dose (AG200-15) preventing progesterone increases in all women (cycles 2-3). In the follicular phase, the lowest-dose patch had the highest rate of increased progesterone in nonobese subjects. Progesterone levels ≥3.0 ng/mL in the follicular phase were more common in obese than nonobese women. AG200-15 suppresses ovulation in obese and nonobese women. All three patches found increased progesterone in the follicular phase, albeit more in obese versus nonobese women. Copyright © 2013 Elsevier Inc. All rights reserved.

  16. Influences of the land use pattern on water quality in low-order streams of the Dongjiang River basin, China: A multi-scale analysis.

    PubMed

    Ding, Jiao; Jiang, Yuan; Liu, Qi; Hou, Zhaojiang; Liao, Jianyu; Fu, Lan; Peng, Qiuzhi

    2016-05-01

    Understanding the relationships between land use patterns and water quality in low-order streams is useful for effective landscape planning to protect downstream water quality. A clear understanding of these relationships remains elusive due to the heterogeneity of land use patterns and scale effects. To better assess land use influences, we developed empirical models relating land use patterns to the water quality of low-order streams at different geomorphic regions across multi-scales in the Dongjiang River basin using multivariate statistical analyses. The land use pattern was quantified in terms of the composition, configuration and hydrological distance of land use types at the reach buffer, riparian corridor and catchment scales. Water was sampled under summer base flow at 56 low-order catchments, which were classified into two homogenous geomorphic groups. The results indicated that the water quality of low-order streams was most strongly affected by the configuration metrics of land use. Poorer water quality was associated with higher patch densities of cropland, orchards and grassland in the mountain catchments, whereas it was associated with a higher value for the largest patch index of urban land use in the plain catchments. The overall water quality variation was explained better by catchment scale than by riparian- or reach-scale land use, whereas the spatial scale over which land use influenced water quality also varied across specific water parameters and the geomorphic basis. Our study suggests that watershed management should adopt better landscape planning and multi-scale measures to improve water quality. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. The Kaposi Sarcoma Herpesvirus Latency-associated Nuclear Antigen DNA Binding Domain Dorsal Positive Electrostatic Patch Facilitates DNA Replication and Episome Persistence.

    PubMed

    Li, Shijun; Tan, Min; Juillard, Franceline; Ponnusamy, Rajesh; Correia, Bruno; Simas, J Pedro; Carrondo, Maria A; McVey, Colin E; Kaye, Kenneth M

    2015-11-20

    Kaposi sarcoma-associated herpesvirus (KSHV) has a causative role in several human malignancies. KSHV latency-associated nuclear antigen (LANA) mediates persistence of viral episomes in latently infected cells. LANA mediates KSHV DNA replication and segregates episomes to progeny nuclei. The structure of the LANA DNA binding domain was recently solved, revealing a positive electrostatic patch opposite the DNA binding surface, which is the site of BET protein binding. Here we investigate the functional role of the positive patch in LANA-mediated episome persistence. As expected, LANA mutants with alanine or glutamate substitutions in the central, peripheral, or lateral portions of the positive patch maintained the ability to bind DNA by EMSA. However, all of the substitution mutants were deficient for LANA DNA replication and episome maintenance. Mutation of the peripheral region generated the largest deficiencies. Despite these deficiencies, all positive patch mutants concentrated to dots along mitotic chromosomes in cells containing episomes, similar to LANA. The central and peripheral mutants, but not the lateral mutants, were reduced for BET protein interaction as assessed by co-immunoprecipitation. However, defects in BET protein binding were independent of episome maintenance function. Overall, the reductions in episome maintenance closely correlated with DNA replication deficiencies, suggesting that the replication defects account for the reduced episome persistence. Therefore, the electrostatic patch exerts a key role in LANA-mediated DNA replication and episome persistence and may act through a host cell partner(s) other than a BET protein or by inducing specific structures or complexes. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  18. Use of transdermal nicotine in a state-level prescription plan for the elderly. A first look at 'real-world' patch users.

    PubMed

    Orleans, C T; Resch, N; Noll, E; Keintz, M K; Rimer, B K; Brown, T V; Snedden, T M

    1994-02-23

    To assess transdermal nicotine use patterns and outcomes in a population of low-income older smokers. A 6-month telephone follow-up survey of smokers filling prescriptions for transdermal nicotine in the first 3 months of 1992. Pennsylvania's Pharmaceutical Assistance Plan for the Elderly, the nation's largest state-level prescription plan for the elderly. A total of 1070 noninstitutionalized male and female smokers aged 65 through 74 years. Self-reported physician/pharmacist advice and adjunctive treatments, concomitant smoking, and 6-month smoking abstinence. Respondents were predominantly long-term heavy smokers. They used nicotine patches for an average of 5 weeks, with few reporting use beyond 3 months or recalling bothersome side effects. Most of those with previous quit attempts rated quitting with the patch "easier." The 29% self-reported 6-month quit rate observed is encouraging. However, compliance with patch use guidelines was far from ideal in this high-risk population: only 54% of respondents received any initial advice or materials from their physicians or pharmacists, fewer than 2% took part in a formal clinic or one-to-one treatment program, and almost half (47%) smoked while using the patch, including 20% who smoked every day. Concomitant smoking was strongly associated with failure to achieve abstinence (P < .001). More frequent contact with physicians and/or pharmacists was associated with less concomitant smoking (P < .001) and higher quit rates (P = .005). This survey offers an important first look at problems and prospects for nicotine patch therapy in older adults, with implications for other groups as well. Prospective studies are needed to clarify optimal treatment regimens and adjuncts.

  19. Monitoring contact sensitization to p-phenylenediamine (PPD) by patch testing with PPD 0.3% in petrolatum.

    PubMed

    Geier, Johannes; Ballmer-Weber, Barbara K; Dickel, Heinrich; Frosch, Peter J; Bircher, Andreas; Weisshaar, Elke; Hillen, Uwe

    2013-07-01

    Being a contact allergen of general relevance, p-phenylenediamine (PPD) is patch tested in the baseline series. However, PPD 1% in petrolatum may actively sensitize. Patch testing with PPD at 0.35% pet. proved to be safe, as far as active sensitization is concerned. To determine whether PPD 0.3% pet. reliably detects PPD sensitization. Patch testing with PPD 0.3% pet. and 1% pet. synchronously was performed in consecutive patients in a multicentre study within the Information Network of Departments of Dermatology. Altogether, 2042 patients were patch tested. PPD 1% pet. yielded 6.0% positive reactions (n = 123), and PPD 0.3% pet. yielded 4.7% (n = 95). The synchronous reproducibility of PPD reactions was similar as known from parallel patch tests with identical PPD concentrations. The diagnostic properties of PPD 0.3% pet. expressed as reaction index and positivity ratio were good. Of the 123 patients reacting to PPD 1% pet., 32 (26%) had no positive reaction to PPD 0.3% pet. In 22 of these 32 patients (69%), no clinical relevance could be found. As patch testing with PPD 0.3% pet. is reliable according to our results, we recommend replacing PPD 1% pet. in the baseline series with PPD 0.3% pet. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  20. Preliminary comparison of landscape pattern-normalized difference vegetation index (NDVI) relationships to central plains stream conditions

    USGS Publications Warehouse

    Griffith, J.A.; Martinko, E.A.; Whistler, J.L.; Price, K.P.

    2002-01-01

    We explored relationships of water quality parameters with landscape pattern metrics (LPMs), land use-land cover (LULC) proportions, and the advanced very high resolution radiometer (AVHRR) normalized difference vegetation index (NDVI) or NDVI-derived metrics. Stream sites (271) in Nebraska, Kansas, and Missouri were sampled for water quality parameters, the index of biotic integrity, and a habitat index in either 1994 or 1995. Although a combination of LPMs (interspersion and juxtaposition index, patch density, and percent forest) within Ozark Highlands watersheds explained >60% of the variation in levels of nitrite-nitrate nitrogen and conductivity, in most cases the LPMs were not significantly correlated with the stream data. Several problems using landscape pattern metrics were noted: small watersheds having only one or two patches, collinearity with LULC data, and counterintuitive or inconsistent results that resulted from basic differences in land use-land cover patterns among ecoregions or from other factors determining water quality. The amount of variation explained in water quality parameters using multiple regression models that combined LULC and LPMs was generally lower than that from NDVI or vegetation phenology metrics derived from time-series NDVI data. A comparison of LPMs and NDVI indicated that NDVI had greater promise for monitoring landscapes for stream conditions within the study area.

  1. Preliminary comparison of landscape pattern-normalized difference vegetation index (NDVI) relationships to Central Plains stream conditions.

    PubMed

    Griffith, Jerry A; Martinko, Edward A; Whistler, Jerry L; Price, Kevin P

    2002-01-01

    We explored relationships of water quality parameters with landscape pattern metrics (LPMs), land use-land cover (LULC) proportions, and the advanced very high resolution radiometer (AVHRR) normalized difference vegetation index (NDVI) or NDVI-derived metrics. Stream sites (271) in Nebraska, Kansas, and Missouri were sampled for water quality parameters, the index of biotic integrity, and a habitat index in either 1994 or 1995. Although a combination of LPMs (interspersion and juxtaposition index, patch density, and percent forest) within Ozark Highlands watersheds explained >60% of the variation in levels of nitrite-nitrate nitrogen and conductivity, in most cases the LPMs were not significantly correlated with the stream data. Several problems using landscape pattern metrics were noted: small watersheds having only one or two patches, collinearity with LULC data, and counterintuitive or inconsistent results that resulted from basic differences in land use-land cover patterns among ecoregions or from other factors determining water quality. The amount of variation explained in water quality parameters using multiple regression models that combined LULC and LPMs was generally lower than that from NDVI or vegetation phenology metrics derived from time-series NDVI data. A comparison of LPMs and NDVI indicated that NDVI had greater promise for monitoring landscapes for stream conditions within the study area.

  2. The "Flat Diaphragm": Does the Degree of Curvature of the Diaphragm on Postoperative X-Ray Predict Congenital Diaphragmatic Hernia Recurrence?

    PubMed

    Short, Heather L; Clifton, Matthew S; Arps, Kelly; Travers, Curtis; Loewen, Jonathan; Schlager, Avraham

    2018-04-01

    The appearance of the diaphragmatic curvature and the rib insertion level of the diaphragm on postoperative chest X-ray (CXR) may predict recurrence. Our purpose was to examine the relationship between the curvature of the diaphragm on postoperative CXR and recurrence. We performed a retrospective review of left-sided, Bochdalek congenital diaphragmatic hernia (CDH) surgical repairs from 2004 to 2015 at a single institution. We developed a tool to measure the flatness of the diaphragm on postoperative CXR, termed the diaphragmatic curvature index (τ). The primary outcome of interest was recurrence after surgical repair. Of the 127 patients identified, 54% (n = 69) had a primary repair, while 46% (n = 58) required a patch repair. The overall recurrence rate was 21.3% (n = 27). There was no difference in median lateral rib insertion level in patients with and without recurrence or those who had a primary or patch repair. The overall median diaphragmatic curvature index was 6.29 (interquartile range [IQR] 5.30-8.09) and was not significantly different among patients who had a recurrence (6.00, IQR 5.34-8.24) and those who did not (6.46, IQR 5.24-8.07) (P = .853). Within the primary repair group (6.34 versus 6.93, P = .84) and the patch repair group (5.59 versus 6.18, P = .46), the median diaphragmatic curvature index was not different among patients who had a recurrence and those who did not. A flat appearance of the diaphragm on postoperative CXR as measured by the median diaphragmatic curvature index (τ) is not associated with recurrence. The shape of the diaphragm on CXR after CDH repair may not be predictive of recurrence as previously thought.

  3. New hope for the survival of the Amur leopard in China

    PubMed Central

    Jiang, Guangshun; Qi, Jinzhe; Wang, Guiming; Shi, Quanhua; Darman, Yury; Hebblewhite, Mark; Miquelle, Dale G.; Li, Zhilin; Zhang, Xue; Gu, Jiayin; Chang, Youde; Zhang, Minghai; Ma, Jianzhang

    2015-01-01

    Natural range loss limits the population growth of Asian big cats and may determine their survival. Over the past decade, we collected occurrence data of the critically endangered Amur leopard worldwide and developed a distribution model of the leopard’s historical range in northeastern China over the past decade. We were interested to explore how much current range area exists, learn what factors limit their spatial distribution, determine the population size and estimate the extent of potential habitat. Our results identify 48,252 km2 of current range and 21,173.7 km2 of suitable habitat patches and these patches may support 195.1 individuals. We found that prey presence drives leopard distribution, that leopard density exhibits a negative response to tiger occurrence and that the largest habitat patch connects with 5,200 km2of Russian current range. These insights provide a deeper understanding of the means by which endangered predators might be saved and survival prospects for the Amur leopard not only in China, but also through imperative conservation cooperation internationally. PMID:26638877

  4. New hope for the survival of the Amur leopard in China.

    PubMed

    Jiang, Guangshun; Qi, Jinzhe; Wang, Guiming; Shi, Quanhua; Darman, Yury; Hebblewhite, Mark; Miquelle, Dale G; Li, Zhilin; Zhang, Xue; Gu, Jiayin; Chang, Youde; Zhang, Minghai; Ma, Jianzhang

    2015-12-07

    Natural range loss limits the population growth of Asian big cats and may determine their survival. Over the past decade, we collected occurrence data of the critically endangered Amur leopard worldwide and developed a distribution model of the leopard's historical range in northeastern China over the past decade. We were interested to explore how much current range area exists, learn what factors limit their spatial distribution, determine the population size and estimate the extent of potential habitat. Our results identify 48,252 km(2) of current range and 21,173.7 km(2) of suitable habitat patches and these patches may support 195.1 individuals. We found that prey presence drives leopard distribution, that leopard density exhibits a negative response to tiger occurrence and that the largest habitat patch connects with 5,200 km(2)of Russian current range. These insights provide a deeper understanding of the means by which endangered predators might be saved and survival prospects for the Amur leopard not only in China, but also through imperative conservation cooperation internationally.

  5. [Dynamic evaluation on landscape connectivity of ecological land: a case study of Shenzhen, Guangdong Province of South China].

    PubMed

    Wu, Jian-Sheng; Liu, Hong-Meng; Huang, Xiu-Lan; Feng, Zhe

    2012-09-01

    Ecological land is the most crucial and sensitive land use type in rapidly urbanizing areas. Landscape connectivity can help us to better understand the interactions between landscape structure and landscape function. By using the land use data of Shenzhen from 1996 to 2008 and the graph theory- based integral index of connectivity (IIC), probability index of connectivity (PC), and importance value of patches (dPC), a dynamic evaluation on the landscape connectivity of ecological land in the City was conducted, and a spatial assessment was made to identify the most important patches for maintaining overall landscape connectivity. In combining with the basic ecological controlling line in Shenzhen, the variations of the landscape connectivity of the ecological land inside and outside the basic ecological controlling line were evaluated. From 1996 to 2008, the overall landscape connectivity of the ecological land in Shenzhen displayed a downward trend, the importance and the spatial distribution of the important patches for maintaining the overall landscape connectivity changed, and the basic ecological controlling line played definite roles in maintaining the landscape connectivity of ecological land inside the line.

  6. Movements of four native Hawaiian birds across a naturally fragmented landscape

    USGS Publications Warehouse

    Knowlton, Jessie L.; Flaspohler, David J.; Paxton, Eben H.; Fukami, Tadashi; Giardina, Christian P.; Gruner, Daniel S.; Wilson Rankin, Erin E.

    2017-01-01

    Animals often increase their fitness by moving across space in response to temporal variation in habitat quality and resource availability, and as a result of intra and inter-specific interactions. The long-term persistence of populations and even whole species depends on the collective patterns of individual movements, yet animal movements have been poorly studied at the landscape level. We quantified movement behavior within four native species of Hawaiian forest birds in a complex lava-fragmented landscape: Hawai‛i ‘amakihi Chlorodrepanis virens, ‘oma‘o Myadestes obscurus, ‘apapane Himatione sanguinea, and ‘i‘iwi Drepanis coccinea. We evaluated the relative importance of six potential intrinsic and extrinsic drivers of movement behavior and patch fidelity: 1) forest fragment size, 2) the presence or absence of invasive rats (Rattus sp.), 3) season, 4) species, 5) age, and 6) sex. The study was conducted across a landscape of 34 forest fragments varying in size from 0.07 to 12.37 ha, of which 16 had rats removed using a treatment-control design. We found the largest movements in the nectivorous ‘apapane and ‘i‘iwi, intermediate levels in the generalist Hawai‛i ‘amakihi, and shortest average movement for the ‘oma‘o, a frugivore. We found evidence for larger patch sizes increasing patch fidelity only in the ‘oma‘o, and an effect of rat-removal increasing patch fidelity of Hawai‛i ‘amakihi only after two years of rat-removal. Greater movement during the non-breeding season was observed in all species, and season was an important factor in explaining higher patch fidelity in the breeding season for ‘apapane and ‘i‘iwi. Sex was important in explaining patch fidelity in ‘oma‘o only, with males showing higher patch fidelity. Our results provide new insights into how these native Hawaiian species will respond to a changing environment, including habitat fragmentation and changing distribution of threats from climate change.

  7. Formulation and optimization of mucoadhesive buccal patches of losartan potassium by using response surface methodology

    PubMed Central

    Ikram, Md.; Gilhotra, Neeraj; Gilhotra, Ritu Mehra

    2015-01-01

    Background: This study was undertaken with an aim to systematically design a model of factors that would yield an optimized sustained release dosage form of an anti-hypertensive agent, losartan potassium, using response surface methodology (RSM) by employing 32 full factorial design. Materials and Methods: Mucoadhesive buccal patches were prepared using different grades of hydroxypropyl methylcellulose (HPMC) (K4M and K100M) and polyvinylpyrrolidone-K30 by solvent casting method. The amount of the release retardant polymers – HPMC K4M (X1) and HPMC K100M (X2) was taken as an independent variable. The dependent variables were the burst release in 30 min (Y1), cumulative percentage release of drug after 8 h (Y2) and swelling index (Y3) of the patches. In vitro release and swelling studies were carried out and the data were fitted to kinetic equations. Results: The physicochemical, bioadhesive, and swelling properties of patches were found to vary significantly depending on the viscosity of the polymers and their combination. Patches showed an initial burst release preceding a more gradual sustained release phase following a nonfickian diffusion process. Discussion: The results indicate that suitable bioadhesive buccal patches with desired permeability could be prepared, facilitated with the RSM. PMID:26682205

  8. Formulation and in vitro evaluation of xanthan gum-based bilayered mucoadhesive buccal patches of zolmitriptan.

    PubMed

    Shiledar, Rewathi R; Tagalpallewar, Amol A; Kokare, Chandrakant R

    2014-01-30

    A novel bilayered mucoadhesive buccal patch of zolmitriptan was prepared using xanthan gum (XG) as mucoadhesive polymer. Hydroxypropyl methylcellulose E-15 was used as film-former and polyvinyl alcohol (PVA) was incorporated, to increase the tensile strength of the patches. To study the effect of independent variables viz. concentrations of XG and PVA, on various dependent variables like in vitro drug release, ex vivo mucoadhesive strength and swelling index, 3(2) factorial design was employed. In vitro drug release studies of optimized formulation showed initially, rapid drug release; 43.15% within 15 min, followed by sustained release profile over 5h. Incorporation of 4% dimethyl sulfoxide enhanced drug permeability by 3.29 folds, transported 29.10% of drug after 5h and showed no buccal mucosal damage after histopathological studies. In conclusion, XG can be used as a potential drug release modifier and mucoadhesive polymer for successful formulation of zolmitriptan buccal patches. Copyright © 2013 Elsevier Ltd. All rights reserved.

  9. Lévy flight movements prevent extinctions and maximize population abundances in fragile Lotka-Volterra systems.

    PubMed

    Dannemann, Teodoro; Boyer, Denis; Miramontes, Octavio

    2018-04-10

    Multiple-scale mobility is ubiquitous in nature and has become instrumental for understanding and modeling animal foraging behavior. However, the impact of individual movements on the long-term stability of populations remains largely unexplored. We analyze deterministic and stochastic Lotka-Volterra systems, where mobile predators consume scarce resources (prey) confined in patches. In fragile systems (that is, those unfavorable to species coexistence), the predator species has a maximized abundance and is resilient to degraded prey conditions when individual mobility is multiple scaled. Within the Lévy flight model, highly superdiffusive foragers rarely encounter prey patches and go extinct, whereas normally diffusing foragers tend to proliferate within patches, causing extinctions by overexploitation. Lévy flights of intermediate index allow a sustainable balance between patch exploitation and regeneration over wide ranges of demographic rates. Our analytical and simulated results can explain field observations and suggest that scale-free random movements are an important mechanism by which entire populations adapt to scarcity in fragmented ecosystems.

  10. Concomitant abdominoplasty and umbilical hernia repair using the Ventralex hernia patch.

    PubMed

    Neinstein, Ryan M; Matarasso, Alan; Abramson, David L

    2015-04-01

    Patients requesting abdominoplasty often have concomitant umbilical hernias and may request simultaneous treatment. The vascularity of the umbilicus is potentially at risk during these combined procedures. In this study, the authors present a technique for treating umbilical hernias at the time of abdominoplasty surgery using the Ventralex hernia patch. A total of 11 female patients with a mean age of 39.4 years (range, 28 to 51 years) undergoing abdominoplasty with umbilical hernia repair with the Ventralex patch were included. The mean body mass index was 27.6 kg/m (range, 20 to 34 kg/m). No vascular compromise of the umbilicus was seen. The hernia repair did not alter the abdominoplasty results. One patient had transient umbilical swelling postoperatively that resolved within 6 months postoperatively. The authors present a series of umbilical hernia repairs in abdominoplasty patients using a minimal access incision by means of the rectus fascia and the Ventralex patch that is fast and reliable and preserves the blood supply to the umbilicus.

  11. Neurophysiological Organization of the Middle Face Patch in Macaque Inferior Temporal Cortex.

    PubMed

    Aparicio, Paul L; Issa, Elias B; DiCarlo, James J

    2016-12-14

    While early cortical visual areas contain fine scale spatial organization of neuronal properties, such as orientation preference, the spatial organization of higher-level visual areas is less well understood. The fMRI demonstration of face-preferring regions in human ventral cortex and monkey inferior temporal cortex ("face patches") raises the question of how neural selectivity for faces is organized. Here, we targeted hundreds of spatially registered neural recordings to the largest fMRI-identified face-preferring region in monkeys, the middle face patch (MFP), and show that the MFP contains a graded enrichment of face-preferring neurons. At its center, as much as 93% of the sites we sampled responded twice as strongly to faces than to nonface objects. We estimate the maximum neurophysiological size of the MFP to be ∼6 mm in diameter, consistent with its previously reported size under fMRI. Importantly, face selectivity in the MFP varied strongly even between neighboring sites. Additionally, extremely face-selective sites were ∼40 times more likely to be present inside the MFP than outside. These results provide the first direct quantification of the size and neural composition of the MFP by showing that the cortical tissue localized to the fMRI defined region consists of a very high fraction of face-preferring sites near its center, and a monotonic decrease in that fraction along any radial spatial axis. The underlying organization of neurons that give rise to the large spatial regions of activity observed with fMRI is not well understood. Neurophysiological studies that have targeted the fMRI identified face patches in monkeys have provided evidence for both large-scale clustering and a heterogeneous spatial organization. Here we used a novel x-ray imaging system to spatially map the responses of hundreds of sites in and around the middle face patch. We observed that face-selective signal localized to the middle face patch was characterized by a gradual spatial enrichment. Furthermore, strongly face-selective sites were ∼40 times more likely to be found inside the patch than outside of the patch. Copyright © 2016 the authors 0270-6474/16/3612729-17$15.00/0.

  12. Evaluating the effect of smoking cessation treatment on a complex dynamical system.

    PubMed

    Bekiroglu, Korkut; Russell, Michael A; Lagoa, Constantino M; Lanza, Stephanie T; Piper, Megan E

    2017-11-01

    To understand the dynamic relations among tobacco withdrawal symptoms to inform the development of effective smoking cessation treatments. Dynamical system models from control engineering are introduced and utilized to evaluate complex treatment effects. We demonstrate how dynamical models can be used to examine how distinct withdrawal-related processes are related over time and how treatment influences these relations. Intensive longitudinal data from a randomized placebo-controlled smoking cessation trial (N=1504) are used to estimate a dynamical model of withdrawal-related processes including momentary craving, negative affect, quitting self-efficacy, and cessation fatigue for each of six treatment conditions (nicotine patch, nicotine lozenge, bupropion, patch + lozenge, bupropion + lozenge, and placebo). Estimation and simulation results show that (1) withdrawal measurements are interrelated over time, (2) nicotine patch + nicotine lozenge showed reduced cessation fatigue and enhanced self-efficacy in the long-term while bupropion + nicotine lozenge was more effective at reducing negative affect and craving, and (3) although nicotine patch + nicotine lozenge had a better initial effect on cessation fatigue and self-efficacy, nicotine lozenge had a stronger effect on negative affect and nicotine patch had a stronger impact on craving. This approach can be used to provide new evidence illustrating (a) the total impact of treatment conditions (via steady state values) and (b) the total initial impact (via rate of initial change values) on smoking-related outcomes for separate treatment conditions, noting that the conditions that produce the largest change may be different than the conditions that produce the fastest change. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Identifying Corresponding Patches in SAR and Optical Images With a Pseudo-Siamese CNN

    NASA Astrophysics Data System (ADS)

    Hughes, Lloyd H.; Schmitt, Michael; Mou, Lichao; Wang, Yuanyuan; Zhu, Xiao Xiang

    2018-05-01

    In this letter, we propose a pseudo-siamese convolutional neural network (CNN) architecture that enables to solve the task of identifying corresponding patches in very-high-resolution (VHR) optical and synthetic aperture radar (SAR) remote sensing imagery. Using eight convolutional layers each in two parallel network streams, a fully connected layer for the fusion of the features learned in each stream, and a loss function based on binary cross-entropy, we achieve a one-hot indication if two patches correspond or not. The network is trained and tested on an automatically generated dataset that is based on a deterministic alignment of SAR and optical imagery via previously reconstructed and subsequently co-registered 3D point clouds. The satellite images, from which the patches comprising our dataset are extracted, show a complex urban scene containing many elevated objects (i.e. buildings), thus providing one of the most difficult experimental environments. The achieved results show that the network is able to predict corresponding patches with high accuracy, thus indicating great potential for further development towards a generalized multi-sensor key-point matching procedure. Index Terms-synthetic aperture radar (SAR), optical imagery, data fusion, deep learning, convolutional neural networks (CNN), image matching, deep matching

  14. Lack of Association Between Dust Mite Sensitivity and Atopic Dermatitis.

    PubMed

    Silverberg, Jonathan Ian; Hanifin, Jon M; Law, Sandra; White, Kevin; Storrs, Frances J

    2016-01-01

    Dust mites (DMs) play a role in type I respiratory allergy. Studies relating to DM irritant versus immune reactions are somewhat conflicting in atopic dermatitis (AD). The aim of this study was to assess the diagnostic use of patch testing to DM in patients with AD and other dermatitides. We performed a prospective study of 323 adults recruited in a patch testing clinic. Patch testing antigens were DM extract (0.01%, 0.1%, 1%, 10%, and 20% in petrolatum; Chemotechnique) and/or 200 index of reactivity in petrolatum (Stallergenes). Patches were placed and read at 48 hours with delayed readings after 72 to 168 hours. There was no association of DM positivity with AD, asthma, hay fever, or demographic factors. There was no association of DM positivity with the clinical diagnosis or phenotype. The number of positive (+, ++, and +++) and doubtful reactions to Chemotechnique DM extract increased with higher concentrations. Positive reactions to DM had a morphological appearance characterized by numerous discrete erythematous papules and, rarely, papulovesicles. Positive reactions to Stallergenes DM 200 IR were infrequent and all weak reactions, similar to DM 0.01%. Patch testing to DM does not seem to have clinical use for determining the etiology of dermatitis.

  15. Comparison of the efficacy of MODIS and MERIS data for detecting cyanobacterial blooms in the southern Caspian Sea.

    PubMed

    Moradi, Masoud

    2014-10-15

    Medium Resolution Imaging Spectrometer (MERIS) data, Moderate Resolution Imaging Spectroradiometer (MODIS) data, and hydro-biological measurements were used to detect two very severe blooms in the southern Caspian Sea in 2005 and 2010. The MERIS Cyanobacteria Index (CIMERIS) was more reliable for detecting cyanobacterial blooms. The CIMERIS and MODIS cyanobacteria indices (CIMODIS) were compared in an effort to find a reliable method for detecting future blooms, as MERIS data were not available after April 2012. The CIMODIS had a linear relationship with and similar spatial patterns to the CIMERIS. On the CIMODIS images, extremely high biomass cyanobacteria patches were masked. A comparison of classified in situ data with the CIMODIS and Floating Algal Index (FAI) from four images of a severe bloom event in 2005 showed that the FAI is a reliable index for bloom detection over extremely dense patches. The corrected CIMODIS, the MODIS FAI and in situ data are adequate tools for cyanobacterial bloom monitoring in the southern Caspian Sea. Copyright © 2014 Elsevier Ltd. All rights reserved.

  16. Effect of Habitat Size, Quality, and Isolation on Functional Groups of Beetles in Hollow Oaks

    PubMed Central

    Pilskog, Hanne Eik; Birkemoe, Tone; Framstad, Erik; Sverdrup-Thygeson, Anne

    2016-01-01

    One of the largest threats to biodiversity is land use change and habitat loss. Hollow oaks (Quercus spp. L.) are well-defined patches that are hotspots for biodiversity and red-listed species, but they are often rare and fragmented in the landscape. We investigated the effect of patch size, habitat quality, and isolation on functional groups and red-listed saproxylic beetles in hollow oaks (n = 40) in Norway. The groups were defined by host tree association, trophic grouping, and red-listed status. Habitat quality, represented by tree form was most important in explaining species richness for most groups. Patch size, represented by circumference and amount of dead branches, was most important in explaining abundance. Isolation, that is single oaks compared with oaks in groups, had a negative effect on the abundance of beetles feeding both on wood and fungi (xylomycethopagous), as well as on species associated with broadleaved trees (oak semi-specialists), but did not affect species richness. This indicates that at this scale and in this landscape, isolated oaks are as species rich and valuable for conservation as other oaks, although some functional groups may be more vulnerable to isolation than others. The red-listed species only responded to patch size, indicating that oaks with large circumference and many dead branches are especially important for red-listed species and for conservation. PMID:26945089

  17. Habitat properties are key drivers of Borrelia burgdorferi (s.l.) prevalence in Ixodes ricinus populations of deciduous forest fragments.

    PubMed

    Ehrmann, Steffen; Ruyts, Sanne C; Scherer-Lorenzen, Michael; Bauhus, Jürgen; Brunet, Jörg; Cousins, Sara A O; Deconchat, Marc; Decocq, Guillaume; De Frenne, Pieter; De Smedt, Pallieter; Diekmann, Martin; Gallet-Moron, Emilie; Gärtner, Stefanie; Hansen, Karin; Kolb, Annette; Lenoir, Jonathan; Lindgren, Jessica; Naaf, Tobias; Paal, Taavi; Panning, Marcus; Prinz, Maren; Valdés, Alicia; Verheyen, Kris; Wulf, Monika; Liira, Jaan

    2018-01-08

    The tick Ixodes ricinus has considerable impact on the health of humans and other terrestrial animals because it transmits several tick-borne pathogens (TBPs) such as B. burgdorferi (sensu lato), which causes Lyme borreliosis (LB). Small forest patches of agricultural landscapes provide many ecosystem services and also the disservice of LB risk. Biotic interactions and environmental filtering shape tick host communities distinctively between specific regions of Europe, which makes evaluating the dilution effect hypothesis and its influence across various scales challenging. Latitude, macroclimate, landscape and habitat properties drive both hosts and ticks and are comparable metrics across Europe. Therefore, we instead assess these environmental drivers as indicators and determine their respective roles for the prevalence of B. burgdorferi in I. ricinus. We sampled I. ricinus and measured environmental properties of macroclimate, landscape and habitat quality of forest patches in agricultural landscapes along a European macroclimatic gradient. We used linear mixed models to determine significant drivers and their relative importance for nymphal and adult B. burgdorferi prevalence. We suggest a new prevalence index, which is pool-size independent. During summer months, our prevalence index varied between 0 and 0.4 per forest patch, indicating a low to moderate disservice. Habitat properties exerted a fourfold larger influence on B. burgdorferi prevalence than macroclimate and landscape properties combined. Increasingly available ecotone habitat of focal forest patches diluted and edge density at landscape scale amplified B. burgdorferi prevalence. Indicators of habitat attractiveness for tick hosts (food resources and shelter) were the most important predictors within habitat patches. More diverse and abundant macro- and microhabitat had a diluting effect, as it presumably diversifies the niches for tick-hosts and decreases the probability of contact between ticks and their hosts and hence the transmission likelihood. Diluting effects of more diverse habitat patches would pose another reason to maintain or restore high biodiversity in forest patches of rural landscapes. We suggest classifying habitat patches by their regulating services as dilution and amplification habitat, which predominantly either decrease or increase B. burgdorferi prevalence at local and landscape scale and hence LB risk. Particular emphasis on promoting LB-diluting properties should be put on the management of those habitats that are frequently used by humans. In the light of these findings, climate change may be of little concern for LB risk at local scales, but this should be evaluated further.

  18. Is in-stream macrophyte growth predictable and what are its impacts on channel-averaged flow characteristics?

    NASA Astrophysics Data System (ADS)

    Jordan, David N.; Thomas, Robert E.; Keevil, Gareth M.; Parsons, Daniel R.; Hardy, Richard J.

    2016-04-01

    Understanding how the growth of aquatic vegetation impacts stage-discharge coupling is vital for river management planning. This study presents an annual record of monthly spatial distribution surveys of the in-stream macrophyte Ranunculus penicillatus coupled with channel form and flow velocity measurements, within a 50 m-long reach of a gravel-bed river. Whereas stage has varied by up to 0.4 m, there has been little change in channel form over the monitoring period (ongoing since 23/07/2014). Macrophyte growth continued from the start of the monitoring period until October 2014 when mean patch area was 6.74 m2, and then decreased throughout a decay phase until January 2015 when mean patch area was 1.12 m2. There was a 75.2% loss of macrophyte surface area between October 2014 and January 2015. The largest patches that remained in January 2015 continued to decay until February. Conversely, new macrophyte patches also began to recolonize the channel during this time. To our knowledge, this is the first evidence of a transition period during which aquatic vegetation is in both decay and recolonization phases simultaneously. In total 69% of patches present in January exhibited regrowth without further decay to form a base for recolonization. Therefore, the spatial distribution of macrophyte patches could be determined to be somewhat persistent. Despite this, due to several different growth factors, there are recognisable differences in both macrophyte patch shape and distribution when comparing data from July 2014 and July 2015, emphasising the unpredictability of macrophyte growth. The decay period of the Ranunculus p. coincided with seasonal high discharges in this catchment. Discharge remained high from January until March 2015, but then began to decrease, reflecting annual peaks in historical records for the study area. Large discharge variations were not matched by a large stage range. Displacement of water by vegetation growth maintained the stage height when discharge rates fell. Greater understanding of the relationship between discharge and growth is therefore necessary for determining appropriate reference conditions for river management planning. Results from this multi-season study will provide the base for future work in quantifying temporal changes to patch shape in addition to quantifying the organisation of patches within the channel.

  19. Inferring local competition intensity from patch size distributions: a test using biological soil crusts

    USGS Publications Warehouse

    Bowker, Matthew A.; Maestre, Fernando T.

    2012-01-01

    Dryland vegetation is inherently patchy. This patchiness goes on to impact ecology, hydrology, and biogeochemistry. Recently, researchers have proposed that dryland vegetation patch sizes follow a power law which is due to local plant facilitation. It is unknown what patch size distribution prevails when competition predominates over facilitation, or if such a pattern could be used to detect competition. We investigated this question in an alternative vegetation type, mosses and lichens of biological soil crusts, which exhibit a smaller scale patch-interpatch configuration. This micro-vegetation is characterized by competition for space. We proposed that multiplicative effects of genetics, environment and competition should result in a log-normal patch size distribution. When testing the prevalence of log-normal versus power law patch size distributions, we found that the log-normal was the better distribution in 53% of cases and a reasonable fit in 83%. In contrast, the power law was better in 39% of cases, and in 8% of instances both distributions fit equally well. We further hypothesized that the log-normal distribution parameters would be predictably influenced by competition strength. There was qualitative agreement between one of the distribution's parameters (μ) and a novel intransitive (lacking a 'best' competitor) competition index, suggesting that as intransitivity increases, patch sizes decrease. The correlation of μ with other competition indicators based on spatial segregation of species (the C-score) depended on aridity. In less arid sites, μ was negatively correlated with the C-score (suggesting smaller patches under stronger competition), while positive correlations (suggesting larger patches under stronger competition) were observed at more arid sites. We propose that this is due to an increasing prevalence of competition transitivity as aridity increases. These findings broaden the emerging theory surrounding dryland patch size distributions and, with refinement, may help us infer cryptic ecological processes from easily observed spatial patterns in the field.

  20. A disposable adhesive patch for stress urinary incontinence.

    PubMed

    North, B B

    1998-04-01

    Stress urinary incontinence (SUI) affects 5 million women in the United States. Current surgical and pharmacological management options are often unsuccessful, forcing many sufferers to rely on bulky and uncomfortable sanitary protection. This study evaluated the safety, efficacy, and acceptability of a small, disposable adhesive patch designed to seal the urethral opening and prevent urine leakage. Thirty-seven women with mild-to-moderate SUI were recruited from a suburban community. Each volunteer participated in a 21-week protocol that included a 1-week qualifying period, 4-week (pretest) control period, 12-week patch-use period, and 4-week (posttest) control period. Patch efficacy was evaluated with quantitative (leakage into sanitary napkin) and qualitative (voiding diary) measures of urine leakage. Symptom questionnaires were also completed. Overall leakage was reduced by 60%, from 1.1 +/- .3 standard error of the mean (SEM) to .44 +/- .11 (SEM) grams of urine per hour. Perception of dryness, measured by voiding diaries, improved 67%, from 13.3 +/- 1.9 (SEM) to 4.3 +/- 0.9 (SEM) leakage episodes per week. Safety evaluation included peri-urethral cytology, urinalysis and urine culture, and vaginal cultures. All measures were unaffected by 3 months of patch use. Acceptability was assessed with questionnaires that measured the impact of patch use on activities of daily living and overall quality of life. Women reported a significant improvement in both measures. All but one volunteer found that the patch was comfortable and were able to place it correctly between the inner labia with written instructions only. The disposable patch significantly reduced urine leakage resulting from SUI in community-based women. Dryness improved significantly, both by measurement of actual leakage and by the subject's perception of dryness. The maturation index of the vestibular tissues showed an increase in the number of superficial cells during patch use. Otherwise, there were no significant changes in vulvar tissues, urine composition, or microbial flora (in vaginal and urine samples). Volunteers reported that the patch improved their overall quality of life.

  1. Great Barrier Reef, Queensland, Australia

    NASA Technical Reports Server (NTRS)

    1990-01-01

    This detailed view of the Great Barrier Reef, Queensland, Australia (19.5S, 149.5E) shows several small patch reefs within the overall reef system. The Great Barrier Reef, largest in the world, comprises thousands of individual reefs of great variety and are closely monitored by marine ecologists. These reefs are about 6000 years old and sit on top of much older reefs. The most rapid coral growth occurs on the landward side of the reefs.

  2. Long-term persistence and fire resilience of oak shrubfields in dry conifer forests of northern New Mexico

    USGS Publications Warehouse

    Guiterman, Christopher H.; Margolis, Ellis; Allen, Craig D.; Falk, Donald A.; Swetnam, Thomas W.

    2017-01-01

    Extensive high-severity fires are creating large shrubfields in many dry conifer forests of the interior western USA, raising concerns about forest-to-shrub conversion. This study evaluates the role of disturbance in shrubfield formation, maintenance and succession in the Jemez Mountains, New Mexico. We compared the environmental conditions of extant Gambel oak (Quercus gambelii) shrubfields with adjoining dry conifer forests and used dendroecological methods to determine the multi-century fire history and successional dynamics of five of the largest shrubfields (76–340 ha). Across the study area, 349 shrubfields (5–368 ha) occur in similar topographic and climate settings as dry conifer forests. This suggests disturbance, rather than other biophysical factors, may explain their origins and persistence. Gambel oak ages and tree-ring fire scars in our sampled shrubfields indicate they historically (1664–1899) burned concurrently with adjoining conifer forests and have persisted for over 115 years in the absence of fire. Aerial imagery from 1935 confirmed almost no change in sampled shrubfield patch sizes or boundaries over the twentieth century. The largest shrubfield we identified is less than 4% the size of the largest conifer-depleted and substantially shrub-dominated area recently formed in the Jemez following extensive high-severity wildfires, indicating considerable departure from historical patterns and processes. Projected hotter droughts and increasingly large high-severity fires could trigger more forest-to-shrub transitions and maintain existing shrubfields, inhibiting conifer forest recovery. Restoration of surface fire regimes and associated historical forest structures likely could reduce the rate and patch size of dry conifer forests being converted to shrubfields.

  3. DETECTION OF FLUX EMERGENCE, SPLITTING, MERGING, AND CANCELLATION OF NETWORK FIELD. I. SPLITTING AND MERGING

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Iida, Y.; Yokoyama, T.; Hagenaar, H. J.

    2012-06-20

    Frequencies of magnetic patch processes on the supergranule boundary, namely, flux emergence, splitting, merging, and cancellation, are investigated through automatic detection. We use a set of line-of-sight magnetograms taken by the Solar Optical Telescope (SOT) on board the Hinode satellite. We found 1636 positive patches and 1637 negative patches in the data set, whose time duration is 3.5 hr and field of view is 112'' Multiplication-Sign 112''. The total numbers of magnetic processes are as follows: 493 positive and 482 negative splittings, 536 positive and 535 negative mergings, 86 cancellations, and 3 emergences. The total numbers of emergence and cancellationmore » are significantly smaller than those of splitting and merging. Further, the frequency dependence of the merging and splitting processes on the flux content are investigated. Merging has a weak dependence on the flux content with a power-law index of only 0.28. The timescale for splitting is found to be independent of the parent flux content before splitting, which corresponds to {approx}33 minutes. It is also found that patches split into any flux contents with the same probability. This splitting has a power-law distribution of the flux content with an index of -2 as a time-independent solution. These results support that the frequency distribution of the flux content in the analyzed flux range is rapidly maintained by merging and splitting, namely, surface processes. We suggest a model for frequency distributions of cancellation and emergence based on this idea.« less

  4. Localized reduction of gingival inflammation using site-specific therapy with a topical gingival patch.

    PubMed

    Samuels, Noah; Saffer, Aron; Wexler, Isaiah D; Oberbaum, Menachem

    2012-01-01

    Sites of inflammation were identified on subjects with moderate-to-severe chronic periodontitis, and were allocated to either patch placement or untreated controls, both for 24 hours. Conventional treatment with scaling and root planing was postponed during the study period. Inflammation was evaluated measuring neutrophilic activity using gingival crevicular fluid (GCF) beta-glucuronidase (b-glu) levels, and clinical response was evaluated using the gingival index (GI). A total of 26 patients were recruited and 36 sites examined, with 22 sites on which the patch was placed and 14 controls. GCF b-glu levels at 24 hours were reduced following patch placement, significantly more so than with controls (17/22 vs. 3/14 sites, respectively; p = 0.002). The patch placement resulted in a significant reduction in mean b-glu levels (-2.52 +/- 1.62), with a reduction from baseline of 29.7%. This compared to untreated controls, for whom the mean b-glu levels and percent change from baseline increased (2.14 +/- 0.89 and 33%, respectively). At 24 hours, GI response rate for treated sites was better than for control sites (18/21 vs. 7/14; p = 0.053). No adverse events were reported in either group. This pilot study indicates that a topical gingival patch promotes reduction of gingival inflammation. Further clinical testing of this novel treatment of gingival inflammation is warranted.

  5. Comparison of NSAID patch given as monotherapy and NSAID patch in combination with transcutaneous electric nerve stimulation, a heating pad, or topical capsaicin in the treatment of patients with myofascial pain syndrome of the upper trapezius: a pilot study.

    PubMed

    Kim, Do-Hyeong; Yoon, Kyung Bong; Park, SangHa; Jin, Tae Eun; An, Yoo Jin; Schepis, Eric A; Yoon, Duck Mi

    2014-12-01

    This study compared the therapeutic effect of monotherapy with a nonsteroidal anti-inflammatory drug (NSAID) patch vs an NSAID patch combined with transcutaneous electric nerve stimulation (TENS), a heating pad, or topical capsaicin in the treatment of patients with myofascial pain syndrome (MPS) of the upper trapezius. A randomized, single-blind, controlled study of combination therapy for patients with MPS was performed. Ninety-nine patients were randomly assigned to one of four different self-management methods for treatment: NSAID patch (N = 25), NSAID patch + TENS (N = 24), NSAID patch + heating pad (N = 25), and NSAID patch + topical capsaicin (N = 25). The NSAID patch used in this study was a ketoprofen patch. All treatment groups were observed for 2 weeks, and the numeric rating scale (NRS) pain score, cervical active range of motion, pressure pain threshold, and Neck Disability Index were assessed. There was no significant difference between the NSAID patch alone group and the three combination therapy groups with respect to decrease in NRS score from baseline (day 0) to each period of observation. In covariate analysis, although there was no difference among the groups in most of the periods, the data at day 14 indicated a trend (P = 0.057). There were no significant differences in the other variables. We did not observe a statistical difference in improvements to the clinical variables among the four different methods. However, further studies regarding the effectiveness of a mixture of topical capsaicin and ketoprofen in patients with MPS should be considered. Wiley Periodicals, Inc.

  6. The Influence of Social Support on Smoking Cessation Treatment Adherence Among HIV+ Smokers.

    PubMed

    de Dios, Marcel A; Stanton, Cassandra A; Cano, Miguel Ángel; Lloyd-Richardson, Elizabeth; Niaura, Raymond

    2016-05-01

    The high prevalence of smoking among people living with HIV is a significant problem. Nonadherence to smoking cessation pharmacotherapy is a barrier for successfully quitting. The current study investigated the extent to which social support variables impact adherence and cessation. Participants were 444 HIV+ smokers who provided data on nicotine patch adherence, social support, and smoking. We conducted a path analysis to estimate (1) the effects of six social support indicators at baseline on nicotine patch adherence; (2) the effect of patch adherence on 7-day point prevalence smoking at 6-month follow-up; and (3) the indirect effects of social support indicators on 7-day point prevalence smoking at 6-month follow-up via patch adherence. The tested model demonstrated good fit as indicated by the comparative fit index, root mean square error of approximation, and weighted root mean square residual (0.94, 0.02, and 0.51, respectively). Path analysis results indicated greater social support network contact was associated with higher levels of nicotine patch adherence (β = .13, P = .02), greater patch adherence was associated with a lower probability of 7-day point prevalence smoking at 6-month follow-up (β = -.47, P < .001) and greater social support network contact (β = -.06, P = .03) had a significant indirect effect on 7-day point prevalence smoking at 6-month follow-up via patch adherence. Findings have implications for smoking cessation interventions that seek to capitalize on the beneficial effects of social support. Such efforts should account for the role that frequency of contact may have on nicotine patch use and other treatment-related mechanisms. © The Author 2015. Published by Oxford University Press on behalf of the Society for Research on Nicotine and Tobacco. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  7. Effects of smoking and body mass index on the exposure of fentanyl in patients with cancer.

    PubMed

    Kuip, Evelien J M; Oldenmenger, Wendy H; Thijs-Visser, Martine F; de Bruijn, Peter; Oosten, Astrid W; Oomen-de Hoop, Esther; Koolen, Stijn L W; Van der Rijt, Carin C D; Mathijssen, Ron H J

    2018-01-01

    The transdermal fentanyl patch is widely used to treat cancer-related pain despite its wide inter- and intrapatient variability in pharmacokinetics. The aim of this study was to investigate whether smoking and body size (i.e. body mass index) influence fentanyl exposure in patients with cancer. These are factors that typically change during treatment and disease trajectories. We performed an explorative cohort study in patients with cancer using transdermal fentanyl patches (Durogesic®), by taking a blood sample for pharmacokinetic analysis one day after applying a patch in patients with a stable fentanyl dose. A total of 88 patients were evaluable. Although no statistically significant difference was found, the plasma concentrations of non-smokers was 28% (95% CI [-14%; +89-%]) higher than those of smokers normalizing for a dose of 25μg/min. Patients with a low BMI (< 20 kg/m2) had almost similar (10% (95% CI [-39%; +97%]) higher) plasma concentrations compared to patients with a high BMI (> 25 kg/m2). A wider variation in fentanyl plasma concentrations was found in this study than anticipated. Due to this variation, studies in larger patient cohorts are needed to further investigate the effect of smoking on plasma concentration of fentanyl and thereby clarify the clinical significance of our findings.

  8. Climatic, ecological, and socioeconomic factors associated with West Nile virus incidence in Atlanta, Georgia, U.S.A.

    PubMed

    Lockaby, Graeme; Noori, Navideh; Morse, Wayde; Zipperer, Wayne; Kalin, Latif; Governo, Robin; Sawant, Rajesh; Ricker, Matthew

    2016-12-01

    The integrated effects of the many risk factors associated with West Nile virus (WNV) incidence are complex and not well understood. We studied an array of risk factors in and around Atlanta, GA, that have been shown to be linked with WNV in other locations. This array was comprehensive and included climate and meteorological metrics, vegetation characteristics, land use / land cover analyses, and socioeconomic factors. Data on mosquito abundance and WNV mosquito infection rates were obtained for 58 sites and covered 2009-2011, a period following the combined storm water - sewer overflow remediation in that city. Risk factors were compared to mosquito abundance and the WNV vector index (VI) using regression analyses individually and in combination. Lagged climate variables, including soil moisture and temperature, were significantly correlated (positively) with vector index as were forest patch size and percent pine composition of patches (both negatively). Socioeconomic factors that were most highly correlated (positively) with the VI included the proportion of low income households and homes built before 1960 and housing density. The model selected through stepwise regression that related risk factors to the VI included (in the order of decreasing influence) proportion of houses built before 1960, percent of pine in patches, and proportion of low income households. © 2016 The Society for Vector Ecology.

  9. Assessment of patches attributes along the Urban Development Gradient

    NASA Astrophysics Data System (ADS)

    Kopel, Daniella; Wittenberg, lea; Malkinson, Dan

    2014-05-01

    The world is increasingly urban. If current trends maintain, by 2050 the global urban population is estimated to be 6.3 billion, nearly doubling the world population in 2010. Consequently, more than 60% of the area projected to be urban in 2030 has yet to be built, replacing the open and agriculture lands with construction and infrastructure. The open green patches (OGP), within the urban matrix, are essential for healthy and wellness of cities by supplying the city's ecological services (Mausback and Seybold, 1998). Regarding future trends, there is a need and obligation to insure the functional and sustainability of the city's OPG. Urban vegetation composition and diversity in the OGP had long been considered as an indication for ecologically functioning systems. Furthermore, urban soil is also essential for the sustainability and function of the urban habitat and ecological services, such as maintaining groundwater restraining urban floods etc. (Lehmann and Stahr 2007). There is no single set of rules to classify a functional urban green patch worth preserving. The aim of this study is to examine the effects of patch properties (including geometry, age, type and location along the urban gradient, connectivity, and urban matrix density) on the presence, abundance and characteristics of vegetation and soil conditions of remnant patches The inspired purpose is to eventually find an assessment for urban open green patches OGP quality by linking, patches attributes, plants indexes and soil quality indexes The research is conducted in the city of Haifa, which is located on the northern part of Mount Carmel in the north-western part of Israel . Mean annual rainfall, 550-800 mm, varies with latitude and the mean temperature is 18.80c. Modern Haifa is a relatively young city which maintains remnant vegetation patches within its municipal boundary. 32 OGP were selected in nine categories (size: small, medium and large, distance from city edge: far, average, near), in which vegetation was surveyed. . All vascular plant species were recorded and identified. The mineral soils (A horizon, depth 10-15 cm) were collected to obtain a constant sample size after removing surface litter and organic matter. The samples were analyzed for mineral and structure properties. Preliminary results of the plant survey and analysis indicated that the patches' vegetation is highly diverse. Within the large patches, regardless of their location along the urban development gradient, higher sub-habitat diversity and plants diversity were observed. The diversity is high for local and exotic species alike. In the medium and small size patches, also regardless of their location, there is a diversity of plant composition that may be connected to different disturbances or matrix related effect not yet considered in the study. Preliminary results of the soil survey and analysis indicated that more than 75% of the soil samples taken from the OGP, regardless of their location in the urban development gradient, exhibited a considerable changes in soil profile, compared to "natural" soils and significant alternations in the physical properties were also observed. The substance that was found in the remnant OGP in Haifa is different from soil, however, links between the urban-soils altered properties and the vegetation composition in those patches, and there relationships are not fully understood.

  10. Depletion of deep marine food patches forces divers to give up early.

    PubMed

    Thums, Michele; Bradshaw, Corey J A; Sumner, Michael D; Horsburgh, Judy M; Hindell, Mark A

    2013-01-01

    Many optimal foraging models for diving animals examine strategies that maximize time spent in the foraging zone, assuming that prey acquisition increases linearly with search time. Other models have considered the effect of patch quality and predict a net energetic benefit if dives where no prey is encountered early in the dive are abandoned. For deep divers, however, the energetic benefit of giving up is reduced owing to the elevated energy costs associated with descending to physiologically hostile depths, so patch residence time should be invariant. Others consider an asymptotic gain function where the decision to leave a patch is driven by patch-depletion effects - the marginal value theorem. As predator behaviour is increasingly being used as an index of marine resource density and distribution, it is important to understand the nature of this gain function. We investigated the dive behaviour of the world's deepest-diving seal, the southern elephant seal Mirounga leonina, in response to patch quality. Testing these models has largely been limited to controlled experiments on captive animals. By integrating in situ measurements of the seal's relative lipid content obtained from drift rate data (a measure of foraging success) with area-restricted search behaviour identified from first-passage time analysis, we identified regions of high- and low-quality patches. Dive durations and bottom times were not invariant and did not increase in regions of high quality; rather, both were longer when patches were of relatively low quality. This is consistent with the predictions of the marginal value theorem and provides support for a nonlinear relationship between search time and prey acquisition. We also found higher descent and ascent rates in high-quality patches suggesting that seals minimized travel time to the foraging patch when quality was high; however, this was not achieved by increasing speed or dive angle. Relative body lipid content was an important predictor of dive behaviour. Seals did not schedule their diving to maximize time spent in the foraging zone in higher-quality patches, challenging the widely held view that maximizing time in the foraging zone translates to greater foraging success. © 2012 The Authors. Journal of Animal Ecology © 2012 British Ecological Society.

  11. Carbon Explorer Assessment of Carbon Biomass Variability and Carbon Flux Systematics in the Upper Ocean During SOFEX

    NASA Astrophysics Data System (ADS)

    Bishop, J. K.; Wood, T. J.; Sherman, J. T.

    2002-12-01

    Three autonomous Carbon Explorers built on SIO's Orbcomm/GPS enhanced Sounding Oceanographic Lagrangian Observer were launched near 55S 172W in the "North" SOFEX experiment area in early January 2002. All Explorers at 55S were programmed to perform profiles from 1000, 300, and 300 m with surfacings, GPS position, and telemetry of profile data initiating at local 0600, 1200, and 1800 hours. The floats were programmed to 'sleep' at 100 m depth between profiles to maximize tracking of the surface layer. Each Explorer carried SeaBird T and S sensors and was additionally fitted with a WETLabs transmissometer based "POC" sensor and a Seapoint scattering meter to assess particulate matter variability. A carbon flux "index" obtained during the 100 m sleep periods was also derived from the POC sensor readings. Explorer 1177 was deployed as a control outside of Fe treated waters on Jan 11 2002 (UTC) and drifted initially to the North East at 10 cm/sec. Explorer 2104, deployed on Jan 19 2002 after the 3rd Fe infusion, advected with the patch to the NE on a course that closely paralleled that of the "control". By Feb 8 2002, the two floats had drifted with the circumpolar current nearly 200 km; Explorer 2104 had recorded a 4-fold build-up of of particles in the upper 60 m whereas records from the nearby control Explorer 1177 showed little change. Ship survey data (Revelle) indicated that Explorer 2104 was near but "in" the trailing edge of the patch. Beginning Feb 14 (several days after the 4th infusion of Fe) and ending on Feb 24 2002, Explorer 2104 data showed isolines of POC concentration beginning to deepen in waters below 60 m and a coincident loss of POC from above; the POC flux index also began to show clearly different and enhanced 'spikes' compared to that recorded by the control. The spikes either reflected temporal variability of particle export from the patch or the intermingled sampling of the "in patch" settling plume of particles and "out-of-patch" background flux. Preliminary analysis of POC flux index integrated over time since the initial Fe amendment indicated a >2 fold enhancement of export from the iron treated waters. If the Explorer was indeed sampling the plume of sinking material intermittently, then the true export enhancement from the patch would be considerably greater. The last 'trace' of Fe treated waters was seen in early March 2002. Explorers 1177 and 2104 continue operations in the howling 50's of the Southern Ocean 8+ months after their deployment.

  12. Geoacoustic Characterization of the Mud Drape at the New England Mud Patch

    NASA Astrophysics Data System (ADS)

    Reed, A. H.

    2016-02-01

    The New England Mud Patch is an extensive deposit of fine-grained sediments that extends from an area south of Cape Cod, MA to south of Montauk Point Long Island, NY out on the continental shelf in water depths of 60 to 90 meters. The mud patch has a remarkable accumulation of up to a 13 meter thick sequence of mud that overlays a transgressive surface of Pleistocene Age and then thins out on the periphery where surficial sediments convert from mud to sand and sand/gravel. The deposit likely accumulated in this region due to the coalescing of shelf currents that had oppositional flow. This work focuses on a section of the mud patch that is centered over the thickest portion of mud and extends east-west for 30 km and north south for 10 km. Gravity cores were collected throughout this region and the cores penetrated the upper 2-4 m of mud at 28 different sites with multiple cores collected in several locations. The mud thickness in these regions exceeded the core barrel length, therefore the cores did not penetrate into the basal sand sediment layer, a relict transgressional horizon, which displays prominently in the acoustic data for this selected region. These cores were evaluated for compressional sound speed (averaging 1480 m/s) and density (1580 kg/m3) and found to be largely homogeneous and similar throughout the study area. The largest source of inhomogeneity was due to dispersed shell hash and disarticulated bivalves, but these inclusions represent minor components in the total sediment volume. The overlying sediment that characterizes the New England Mud Patch can be readily classified as mud, silty mud, or sandy-silty mud. This fine-grained sediment deposit reflects upon the low-energy nature of the hydrodynamics within this region.

  13. An underwater turbulence degraded image restoration algorithm

    NASA Astrophysics Data System (ADS)

    Furhad, Md. Hasan; Tahtali, Murat; Lambert, Andrew

    2017-09-01

    Underwater turbulence occurs due to random fluctuations of temperature and salinity in the water. These fluctuations are responsible for variations in water density, refractive index and attenuation. These impose random geometric distortions, spatio-temporal varying blur, limited range visibility and limited contrast on the acquired images. There are some restoration techniques developed to address this problem, such as image registration based, lucky region based and centroid-based image restoration algorithms. Although these methods demonstrate better results in terms of removing turbulence, they require computationally intensive image registration, higher CPU load and memory allocations. Thus, in this paper, a simple patch based dictionary learning algorithm is proposed to restore the image by alleviating the costly image registration step. Dictionary learning is a machine learning technique which builds a dictionary of non-zero atoms derived from the sparse representation of an image or signal. The image is divided into several patches and the sharp patches are detected from them. Next, dictionary learning is performed on these patches to estimate the restored image. Finally, an image deconvolution algorithm is employed on the estimated restored image to remove noise that still exists.

  14. Lyral has been included in the patch test standard series in Germany.

    PubMed

    Geier, Johannes; Brasch, Jochen; Schnuch, Axel; Lessmann, Holger; Pirker, Claudia; Frosch, Peter J

    2002-05-01

    Lyral 5% pet. was tested in 3245 consecutive patch test patients in 20 departments of dermatology in order (i) to check the diagnostic quality of this patch test preparation, (ii) to examine concomitant reactions to Lyral and fragrance mix (FM), and (iii) to assess the frequency of contact allergy to Lyral in an unselected patch test population of German dermatological clinics. 62 patients reacted to Lyral, i.e. 1.9%. One third of the positive reactions were + + and + + +. The reaction index was 0.27. Thus, the test preparation can be regarded a good diagnostic tool. Lyral and fragrance mix (FM) were tested in parallel in 3185 patients. Of these, 300 (9.4%) reacted to FM, and 59 (1.9%) to Lyral. In 40 patients, positive reactions to both occurred, which is 13.3% of those reacting to FM, and 67.8% of those reacting to Lyral. So the concordance of positive test reactions to Lyral and FM was only slight. Based on these results, the German Contact Dermatitis Research Group (DKG) decided to add Lyral 5% pet. to the standard series.

  15. Spatial Configuration of Drought Disturbance and Forest Gap Creation across Environmental Gradients

    PubMed Central

    Andrew, Margaret E.; Ruthrof, Katinka X.; Matusick, George; Hardy, Giles E. St. J.

    2016-01-01

    Climate change is increasing the risk of drought to forested ecosystems. Although drought impacts are often anecdotally noted to occur in discrete patches of high canopy mortality, the landscape effects of drought disturbances have received virtually no study. This study characterized the landscape configuration of drought impact patches and investigated the relationships between patch characteristics, as indicators of drought impact intensity, and environmental gradients related to water availability to determine factors influencing drought vulnerability. Drought impact patches were delineated from aerial surveys following an extreme drought in 2011 in southwestern Australia, which led to patchy canopy dieback of the Northern Jarrah Forest, a Mediterranean forest ecosystem. On average, forest gaps produced by drought-induced dieback were moderate in size (6.6 ± 9.7 ha, max = 85.7 ha), compact in shape, and relatively isolated from each other at the scale of several kilometers. However, there was considerable spatial variation in the size, shape, and clustering of forest gaps. Drought impact patches were larger and more densely clustered in xeric areas, with significant relationships observed with topographic wetness index, meteorological variables, and stand height. Drought impact patch clustering was more strongly associated with the environmental factors assessed (R2 = 0.32) than was patch size (R2 = 0.21); variation in patch shape remained largely unexplained (R2 = 0.02). There is evidence that the xeric areas with more intense drought impacts are ‘chronic disturbance patches’ susceptible to recurrent drought disturbance. The spatial configuration of drought disturbances is likely to influence ecological processes including forest recovery and interacting disturbances such as fire. Regime shifts to an alternate, non-forested ecosystem may occur preferentially in areas with large or clustered drought impact patches. Improved understanding of drought impacts and their patterning in space and time will expand our knowledge of forest ecosystems and landscape processes, informing management of these dynamic systems in an uncertain future. PMID:27275744

  16. Neurophysiological Organization of the Middle Face Patch in Macaque Inferior Temporal Cortex

    PubMed Central

    Aparicio, Paul L.; Issa, Elias B.

    2016-01-01

    While early cortical visual areas contain fine scale spatial organization of neuronal properties, such as orientation preference, the spatial organization of higher-level visual areas is less well understood. The fMRI demonstration of face-preferring regions in human ventral cortex and monkey inferior temporal cortex (“face patches”) raises the question of how neural selectivity for faces is organized. Here, we targeted hundreds of spatially registered neural recordings to the largest fMRI-identified face-preferring region in monkeys, the middle face patch (MFP), and show that the MFP contains a graded enrichment of face-preferring neurons. At its center, as much as 93% of the sites we sampled responded twice as strongly to faces than to nonface objects. We estimate the maximum neurophysiological size of the MFP to be ∼6 mm in diameter, consistent with its previously reported size under fMRI. Importantly, face selectivity in the MFP varied strongly even between neighboring sites. Additionally, extremely face-selective sites were ∼40 times more likely to be present inside the MFP than outside. These results provide the first direct quantification of the size and neural composition of the MFP by showing that the cortical tissue localized to the fMRI defined region consists of a very high fraction of face-preferring sites near its center, and a monotonic decrease in that fraction along any radial spatial axis. SIGNIFICANCE STATEMENT The underlying organization of neurons that give rise to the large spatial regions of activity observed with fMRI is not well understood. Neurophysiological studies that have targeted the fMRI identified face patches in monkeys have provided evidence for both large-scale clustering and a heterogeneous spatial organization. Here we used a novel x-ray imaging system to spatially map the responses of hundreds of sites in and around the middle face patch. We observed that face-selective signal localized to the middle face patch was characterized by a gradual spatial enrichment. Furthermore, strongly face-selective sites were ∼40 times more likely to be found inside the patch than outside of the patch. PMID:27810930

  17. Historical forest patterns of Oregon's central Coast Range

    USGS Publications Warehouse

    Ripple, W.J.; Hershey, K.T.; Anthony, R.G.

    2000-01-01

    To describe the composition and pattern of unmanaged forestland in Oregon's central Coast Range, we analyzed forest conditions from a random sample of 18 prelogging (1949 and earlier) landscapes. We also compared the amount and variability of old forest (conifer-dominated stands > 53 cm dbh) in the prelogging landscapes with that in the current landscapes. Sixty-three percent of the prelogging landscape comprised old forest, approximately 21% of which also had a significant (> 20% cover) hardwood component. The proportions of forest types across the 18 prelogging landscapes varied greatly for both early seral stages (cv = 81194) and hardwoods (cv = 127) and moderately for old forest (cv = 39). With increasing distance from streams, the amount of hardwoods and nonforest decreased, whereas the amount of seedling/sapling/pole and young conifers increased. The amount of old forest was significantly greater (p < 0.002) in prelogging forests than in current landscapes. Old-forest patterns also differed significantly (p < 0.015) between prelogging and current landscapes; patch density, coefficient of variation of patch size, edge density, and fragmentation were greater in current landscapes and mean patch size, largest patch size, and core habitat were greater in prelogging forests. Generally, old-forest landscape pattern variables showed a greater range in prelogging landscapes than in current landscapes. Management strategies designed to increase the amount of old forest and the range in landscape patterns would result in a landscape more closely resembling that found prior to intensive logging. (C) 2000 Elsevier Science Ltd.

  18. Assessment of Tibetan grassland degeneration via landscape analysis

    NASA Astrophysics Data System (ADS)

    Sun, Jian; Hou, Ge; Ma, Baibing; Zang, Wenqian

    2017-04-01

    Desertification as one of the most severity social-economic-environmental issues has been extensive researched, and the assessments of desertification can be implemented accurately and efficiently based on the landscape indicators of vegetation coverage. Consequently, we explored the relationships of the degeneration index of the grassland with climate factors (temperature and precipitation), and human disturbance factors (livestock quantity and animal husbandry output value) via a landscape assessment approach across Tibet. The results showed that the vegetation coverage presented an increase tendency in the central region of Tibet, but the adverse phenomenon was observed in the northwest region. Meanwhile, the correlation of vegetation coverage with precipitation presented as positive effect in most region of Tibet except some regions of the alpine steppe, and the positive correlation of vegetation coverage with temperature also was observed in the less northwest region of Tibet. In addition, we found that the livestock quantity play a key roles in regulating vegetation coverage of the central region. Furthermore, the landscape indexes [number of patches (NP), patch density (PD), contagion index (CONTAG), landscape shape index (LSI), aggregation index (AI)] of grasslands were analyzed, the results exposed that vegetation coverage (1%-20%) has the positive influences on CONTAG and AI, but negative affects LSI, PD and NP. Morreover, there are opposite correlations among vegetation coverage and landscape indexes when vegetation coverage is 21%-40%. We concluded that overgrazing is the main reason of grassland degradation in Tibet, especially the number of livestock aggravates the landscape fragmentation. The results highlighted the alpine grassland management in future.

  19. What Is the Role of Land-Use Compositions and Spatial Configurations in Sediment Yield from Mountainous Watershed?

    NASA Astrophysics Data System (ADS)

    Shi, Z. H.

    2014-12-01

    There are strong ties between land use and sediment yield in watersheds. Many studies have used multivariate regression techniques to explore the response of sediment yield to land-use compositions and spatial configurations in watersheds. However, one issue with the use of conventional statistical methods to address relationships between land-use compositions and spatial configurations and sediment yield is multicollinearity. This paper examines the combined effects of land-use compositions and land-use spatial configurations of the watershed on the specific sediment yield of the Upper Du River watershed (8,973 km2) in China using the Soil and Water Assessment Tool (SWAT) and partial least-squares regression (PLSR). The land-use compositions and spatial configurations of the watershed were calculated at the sub-watershed scale. The sediment yields from sub-watershed were evaluated using SWAT model. The first-order factors were identified by calculating the variable importance for the projection (VIP). The results revealed that the land-use compositions exerted the largest effects on the specific sediment yield and explained 61.2% of the variation in the specific sediment yield. Land-use spatial configurations were also found to have a large effect on the specific sediment yield and explained 21.7% of the observed variation in the specific sediment yield. The following are the dominant first-order factors of the specific sediment yield at the sub-watershed scale: the areal percentages of agriculture and forest, patch density, value of the Shannon's diversity index, contagion. The VIP values suggested that the Shannon's diversity index and contagion are important factors for sediment delivery.

  20. Seasonality and edge effect determine herbivory risk according to different plant association models.

    PubMed

    Miranda, M; Díaz, L; Sicilia, M; Cristóbal, I; Cassinello, J

    2011-01-01

    We report evidence of hierarchical resource selection by large herbivores and plant neighbouring effects in a Mediterranean ecosystem. Plant palatability was assessed according to herbivore foraging decisions. We hypothesize that under natural conditions large herbivores follow a hierarchical foraging pattern, starting at the landscape scale, and then selecting patches and individual plants. A between- and within-patch selection study was carried out in an area formed by scrubland and pasture patches, connected by habitat edges. With regard to between-patch selection, quality-dependent resource selection is reported: herbivores mainly consume pasture in spring and woody plants in winter. Within-patch selection was also observed in scrub habitats, influenced by season, relative patch palatability and edge effect. We defined a Proximity Index (PI) between palatable and unpalatable plants, which allowed verification of neighbouring effects. In spring, when the preferred food resource (i.e. herbs) is abundant, we observed that in habitat edges large herbivores basically select the relatively scarce palatable shrubs, whereas inside scrubland, unpalatable shrub consumption was related to increasing PI. In winter, a very different picture was observed; there was low consumption of palatable species surrounded by unpalatable species in habitat edges, where the latter were more abundant. These outcomes could be explained though different plant associations described in the literature. We conclude that optimal foraging theory provides a conceptual framework behind the observed interactions between plants and large herbivores in Mediterranean ecosystems. © 2010 German Botanical Society and The Royal Botanical Society of the Netherlands.

  1. Effects of time and recall of patch test results on quality of life (QoL) after testing. Cross-sectional study analyzing QoL in hand eczema patients 1, 5 and 10 years after patch testing.

    PubMed

    Jamil, Wasim N; Lindberg, Magnus

    2017-08-01

    Patch testing can improve health-related quality of life (HRQOL). To study the impact on HRQOL of elapsed time after patch testing (1-10 years), and how the outcome of testing and patients' recall affects HRQOL. The Dermatology Life Quality Index (DLQI) questionnaire was sent to all patients (aged 18-65 years) who were patch tested for suspected contact allergy in 2009, 2005 and 2000 at the Department of Dermatology in Örebro. The response rate was 51% (n = 256). The DLQI score was significantly lower at 10 years after patch testing (mean DLQI = 5.5) than at 1 year (mean DLQI = 7.7). Work was the most impaired aspect. A binary logistic model showed that only time (10 years after testing) was associated with no effect, a light effect or a moderate effect (DLQI < 10) on HRQOL. No such association was seen for patients with negative or positive test results concerning full recall, partial recall or no recall of diagnosed allergens. Although there was an improvement in HRQOL over time, the work aspect remained a major problem. The improvement was not affected by the outcome of testing and patients' recall of test results. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  2. [Dynamic changes of landscape pattern and hemeroby in Ximen Island wetland, Zhejiang Province, China].

    PubMed

    Xiao, Cui; Xie, Xue-Fen; Wu, Tao; Jiang, Guo-Jun; Bian, Hua-Jing; Xu, Wei

    2014-11-01

    Abstract: The hemeroby type classification system of Ximen Island wetland of Zhejiang Province was established based on the multiple datasets: SOPT-5 image data with a spatial resolution of 5 m in 2007 and 2010, its wetland land cover and land use status, the National Land Use Classification (on trail), and sea area use classification of marine industry standards as well as remote sensing data features. Meanwhile, the dynamic relationship between the landscape pattern and the degree of hemeroby in Ximen Island was investigated with the landscape indices and hemeroby index (HI) derived from the landscape pattern index and GIS spatial analysis. The results showed that the wetland landscape spatial heterogeneity, fragmentation and dominance index dropped, and the landscape shape index complexity was low. The human disturbance center developed from a dispersion type to a concentration type. The landscape type of the disturbance center was bare land and settlement. The HI rose up from the sea to the land. Settlement, wharf and traffic land had the highest HI. The HI of the mudflat cultivation, mudflats and raft-cultivation dramatically changed. Marine-terrestrial interlaced zone showed a low total HI with unstable characteristics. The number of patches declined of undisturbed, partially disturbed and completely disturbed landscapes. Mean patch areas of partially disturbed and completely disturbed landscapes increased, and that of the undisturbed decreased. Mean shape index of the undisturbed landscape decreased, while the partially disturbed and completely disturbed landscapes showed a trend of shape complication.

  3. [Effects of green space vegetation canopy pattern on the microclimate in residential quarters of Shenzhen City].

    PubMed

    Li, Ying-Han; Wang, Jun-Jian; Chen, Xue; Sun, Jian-Lin; Zeng, Hui

    2011-02-01

    Based on field survey and landscape pattern analysis, this paper studied the effects of green space vegetation canopy on the microclimate in three typical residential quarters in Shenzhen City. In each of the residential quarters, 22-26 points were chosen for meteorological observation; and around each of the observation points, a 20 m x 20 m quadrat was installed, with each quadrat divided into two different patches, one covered by vegetation canopy and the another no-covered. The patch density index (D(p)) and contagion index (CONTAG) in each quadrat were calculated to analyze the relationships between vegetation canopy pattern index and microclimate in each point. The results showed that the green space vegetation canopy pattern in Shenzhen had significant regulation effect on temperature and humidity. The cooling effect was mainly from the shading effect of vegetation, and also, correlated with vegetation quantity. The increase in the CONTAG of bare surface had obvious negative effects on the regulation effect of vegetation on microclimate. The regulation capability of green space vegetation on the temperature and humidity in residential quarters mainly came from tall arbor species.

  4. Unraveling Landscape Complexity: Land Use/Land Cover Changes and Landscape Pattern Dynamics (1954-2008) in Contrasting Peri-Urban and Agro-Forest Regions of Northern Italy.

    PubMed

    Smiraglia, D; Ceccarelli, T; Bajocco, S; Perini, L; Salvati, L

    2015-10-01

    This study implements an exploratory data analysis of landscape metrics and a change detection analysis of land use and population density to assess landscape dynamics (1954-2008) in two physiographic zones (plain and hilly-mountain area) of Emilia Romagna, northern Italy. The two areas are characterized by different landscape types: a mixed urban-rural landscape dominated by arable land and peri-urban settlements in the plain and a traditional agro-forest landscape in the hilly-mountain area with deciduous and conifer forests, scrublands, meadows, and crop mosaic. Urbanization and, to a lesser extent, agricultural intensification were identified as the processes underlying landscape change in the plain. Land abandonment determining natural forestation and re-forestation driven by man was identified as the process of change most representative of the hilly-mountain area. Trends in landscape metrics indicate a shift toward more fragmented and convoluted patterns in both areas. Number of patches, the interspersion and juxtaposition index, and the large patch index are the metrics discriminating the two areas in terms of landscape patterns in 1954. In 2008, mean patch size, edge density, interspersion and juxtaposition index, and mean Euclidean nearest neighbor distance were the metrics with the most different spatial patterns in the two areas. The exploratory data analysis of landscape metrics contributed to link changes over time in both landscape composition and configuration providing a comprehensive picture of landscape transformations in a wealthy European region. Evidence from this study are hoped to inform sustainable land management designed for homogeneous landscape units in similar socioeconomic contexts.

  5. 76 FR 60957 - Self-Regulatory Organizations; NYSE Arca, Inc.; Order Granting Approval of a Proposed Rule Change...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-30

    ... universe representing approximately 75.4% of the global equity market. The Index includes the largest... index of large capitalization companies. The Index represents approximately 75.4% of the global equity...

  6. [Delineation of ecological security pattern based on ecological network].

    PubMed

    Fu, Qiang; Gu, Chao Lin

    2017-03-18

    Ecological network can be used to describe and assess the relationship between spatial organization of landscapes and species survival under the condition of the habitat fragmentation. Taking Qingdao City as the research area, woodland and wetland ecological networks in 2005 were simulated based on least cost path method, and the ecological networks were classified by their corridors' cumulative cost value. We made importance distinction of ecological network structure elements such as patches and corridors using betweenness centrality index and correlation length-percentage of importance of omitted patches index, and then created the structure system of ecological network. Considering the effects brought by the newly-added construction land from 2005 to 2013, we proposed the ecological security pattern for construction land change of Qingdao City. The results showed that based on ecological network framework, graph theory based methods could be used to quantify both attributes of specific ecological land (e.g., the area of an ecological network patch) and functional connection between ecological lands. Between 2005 and 2013, large area of wetlands had been destroyed by newly-added construction land, while the role of specific woodland and wetland played in the connection of the whole network had not been considered. The delineation of ecological security pattern based on ecological network could optimize regional ecological basis, provide accurate spatial explicit decision for ecological conservation and restoration, and meanwhile provide scientific and reasonable space guidance for urban spatial expansion.

  7. [Analysis of urban forest landscape pattern in Hefei].

    PubMed

    Wu, Zemin; Wu, Wenyou; Gao, Jian; Zhang, Shaojie

    2003-12-01

    Based on the theory and methodology of landscape ecology, the landscape pattern of the study area (17.6 km2) in the downtown of Hefei was analyzed by using the techniques of RS, GPS and GIS. The object was to provide a comprehensive method to study urban forest structure and its function in environmental improvement. The results showed that there were 5 major landscape elements, i.e., building and hard pavement surface, water, road, urban forest, and general green land in the area. The landscape matrix was building and pavement surface, occupied 73.13% of total land. Road was the typical corridor element in the city and occupied 6.89%. Green land occupied 11.44%, in which, urban forest patch occupied 9.18%. There were 408 urban forest patches, with an area of 161.16 hm2. The average area of the patch was 0.396 hm2, and the maximum area was 12 hm2. 48% of urban forest patch was identified as small scale patches with < 500 m2 of area, and only 8.6% of them was larger than 1 hm2. The number of general green land patch was 255, with an area of 39.74 hm2, which accounted for 2.26% of land area, and its average and maximum area was 0.1558 hm2 and 3.86 hm2, respectively. There were 147 water patches, with an area of 149.93 hm2, and occupied 8.54% of land, and the average and maximum area of the patch was 1.02 hm2 and 16 hm2, respectively. In the study area, both of the Shannon-Weiner landscape diversity index and evenness were low, only 0.928 and 0.576, respectively. In addition, the dominance of urban forest patch and general green land was 0.39 showing that the two landscape elements had a certain influence on the environment of the study area. The concept of interior habitat for forest was introduced in this paper, which was employed to make a scale class system of urban forest patch. The threshold area with interior habitat for urban forest patch was 9800 m2, and there was 31.69 hm2 of interior habitat of urban forest in total, which occupied 19.7% of the total area of urban forest patch. This situation was not favorable for providing more habitats to support species diversity. It's suggested that the concept of interior habitat could be employed to identify urban forest patch, and a scale system of small scale patch of urban forest-middle patch-large patch-extra large patch was build in the paper. Based on this system, the ratio of different scales of urban forest patch in the study area should be 2:2:2:3. The authors also suggested that larger pieces (1.5-3.0 hm2) of urban forest patch should be built, and more urban forests should be established in the northeastern part of the city in the future.

  8. Giant pseudomeningocele causing urinary obstruction in a patient with Marfan syndrome.

    PubMed

    Stone, Jeremy G; Bergmann, Liisa L; Takamori, Ryan; Donovan, Daniel J

    2015-07-01

    Defective collagen biosynthesis in Marfan syndrome predisposes to dural defects such as dural ectasia, meningocele, and pseudomeningocele; thus, an increased index of suspicion for these conditions should be present in the clinical setting of Marfan syndrome. The authors describe a young woman with Marfan syndrome who was being treated with anticoagulants for a prosthetic heart valve and who presented with a spontaneous retroperitoneal hemorrhage requiring surgical evacuation. No CSF leak was encountered at surgery, but she developed progressively more severe positional headaches over the following year. She then experienced the sudden onset of acute urinary obstruction, at which time CT revealed a 17 × 15 × 13-cm presacral pseudomeningocele communicating with the thecal sac through a sacral bone defect. An anterior surgical approach was used for drainage of the pseudomeningocele as well as for primary closure of the dural defect with a bovine pericardial patch and autologous subcutaneous fat graft. After a short period of lumbar subarachnoid drainage of the CSF, the patient was able to resume normal activity without recurrent symptoms. To the authors' knowledge, such a pseudomeningocele in a patient with Marfan syndrome has been reported only twice, and this case features the largest pseudomeningocele to date. They also review the pertinent literature regarding presentation, diagnosis, and management of these lesions.

  9. Extent of Night Warming and Spatially Heterogeneous Cloudiness Differentiate Temporal Trend of Greenness in Mountainous Tropics in the New Century

    NASA Astrophysics Data System (ADS)

    Yu, Mei; Gao, Qiong; Gao, Chunxiao; Wang, Chao

    2017-01-01

    Tropical forests have essential functions in global C dynamics but vulnerable to changes in land cover land use (LCLUC) and climate. The tropics of Caribbean are experiencing warming and drying climate and diverse LCLUC. However, large-scale studies to detect long-term trends of C and mechanisms behind are still rare. Using MODIS Enhanced Vegetation Index (EVI), we investigated greenness trend in the Greater Antilles Caribbean during 2000-2015, and analyzed trend of vegetation patches without LCLUC to give prominence to climate impacts. We hypothesized that night warming and heavy cloudiness would reduce EVI in this mountainous tropical region. Over the 15 years, EVI decreased significantly in Jamaica, Haiti, Dominican Republic, and Puerto Rico, but increased in Cuba partly due to its strong reforestation. Haiti had the largest decreasing trend because of continuous deforestation for charcoals. After LCLUC was excluded, EVI trend still varied greatly, decreasing in the windward but increasing in the leeward of Puerto Rico. Nighttime warming reinforced by spatially heterogeneous cloudiness was found to significantly and negatively correlate with EVI trend, and explained the spatial pattern of the latter. Although cooled daytime and increased rainfall might enhance EVI, nighttime warming dominated the climate impacts and differentiated the EVI trend.

  10. Extent of Night Warming and Spatially Heterogeneous Cloudiness Differentiate Temporal Trend of Greenness in Mountainous Tropics in the New Century

    PubMed Central

    Yu, Mei; Gao, Qiong; Gao, Chunxiao; Wang, Chao

    2017-01-01

    Tropical forests have essential functions in global C dynamics but vulnerable to changes in land cover land use (LCLUC) and climate. The tropics of Caribbean are experiencing warming and drying climate and diverse LCLUC. However, large-scale studies to detect long-term trends of C and mechanisms behind are still rare. Using MODIS Enhanced Vegetation Index (EVI), we investigated greenness trend in the Greater Antilles Caribbean during 2000–2015, and analyzed trend of vegetation patches without LCLUC to give prominence to climate impacts. We hypothesized that night warming and heavy cloudiness would reduce EVI in this mountainous tropical region. Over the 15 years, EVI decreased significantly in Jamaica, Haiti, Dominican Republic, and Puerto Rico, but increased in Cuba partly due to its strong reforestation. Haiti had the largest decreasing trend because of continuous deforestation for charcoals. After LCLUC was excluded, EVI trend still varied greatly, decreasing in the windward but increasing in the leeward of Puerto Rico. Nighttime warming reinforced by spatially heterogeneous cloudiness was found to significantly and negatively correlate with EVI trend, and explained the spatial pattern of the latter. Although cooled daytime and increased rainfall might enhance EVI, nighttime warming dominated the climate impacts and differentiated the EVI trend. PMID:28120949

  11. Effects of habitat fragmentation on the genetic diversity and differentiation of Dendrolimus punctatus (Lepidoptera: Lasiocampidae) in Thousand Island Lake, China, based on mitochondrial COI gene sequences.

    PubMed

    Lv, K; Wang, J-R; Li, T-Q; Zhou, J; Gu, J-Q; Zhou, G-X; Xu, Z-H

    2018-05-10

    Thousand Island Lake (TIL) is a typical fragmented landscape and an ideal model to study ecological effects of fragmentation. Partial fragments of the mitochondrial cytochrome oxidase subunit I gene of 23 island populations of Dendrolimus punctatus in TIL were sequenced, 141 haplotypes being identified. The number of haplotypes increased significantly with the increase in island area and shape index, whereas no significant correlation was detected between three island attributes (area, shape and isolation) and haplotype diversity. However, the correlation with number of haplotypes was no longer significant when the 'outlier' island JSD (the largest island) was not included. Additionally, we found no significant relationship between geographic distance and genetic distance. Geographic isolation did not obstruct the gene flow among D. punctatus populations, which might be because of the high dispersal capacity of this pine moth. Fragmentation resulted in the conversion of large and continuous habitats into isolated, small and insular patches, which was the primary effect on the genetic diversity of D. punctatus in TIL. The conclusion to emphasize from our research is that habitat fragmentation reduced the biological genetic diversity to some extent, further demonstrating the importance of habitat continuity in biodiversity protection.

  12. DEVELOPMENT OF AN INDEX OF ALIEN SPECIES INVASIVENESS: AN AID TO ASSESSING RIPARIAN VEGETATION CONDITION

    EPA Science Inventory

    Many riparian areas are invaded by alien plant species that negatively affect native species composition, community dynamics and ecosystem properties. We sampled vegetation along reaches of 31 low order streams in eastern Oregon, and characterized species assemblages at patch an...

  13. Population structure and inbreeding vary with successional stage in created Spartina alterniflora marshes

    USGS Publications Warehouse

    Travis, S.E.; Proffitt, C.E.; Ritland, K.

    2004-01-01

    Recruitment patterns in clonal plant populations are predicted to vary with seed dispersal capability and disturbance regime, such that species with small, widely dispersed seeds will become increasingly dominated by vegetative recruitment on disturbed areas following early colonization. Subsequent mortality due to competitive or stochastic effects is then predicted to cause a gradual decline in both clonal diversity and the ability of surviving clones to avoid geitonogamous mating and possible inbreeding depression. We tested predictions of these hypotheses by comparing four adjacent populations of the salt marsh plant, Spartina alterniflora, ranging in age from 2 to ???50 yr, by measuring fine-scale genetic structure at the level of both ramets and genets, and the rate of inbreeding. For this purpose, we sampled maternal tissue and seeds from discrete patches in the field and then genotyped both maternal and seedling tissue (germinated in a growth chamber) using standard molecular protocols. As predicted, we observed an increase in clonal diversity (measured as the complement of the Simpson Index corrected for finite sample sizes, 1-D) up to a maximum of 0.71 within 3-m2 patches at 16 yr, declining to 0.55 by ???50 yr. Local recruitment of seedlings was evident as genetic structure occurring at the level of patches, as measured by the fixation index, ??, which was inversely correlated with diversity (R2 > 0.90 at all patch scales). Outcrossing rates were positively associated with clonal diversity, with the highest level (89%) at an intermediate level of 1-D. The greatest selfing (32%) occurred in young (2-yr-old) patches with low diversity. Biparental inbreeding was minimal in all populations, never exceeding 1%. Inbreeding depression was inferred to be severe, as evidenced by near-zero adult inbreeding coefficients. These results suggest a possible fitness trade-off between clonal growth and the opportunity for outcrossing. We recommend that restoration plantings of clonal species with limited sexual recruitment capabilities should be designed to ensure adequate clonal diversity for the avoidance of inbreeding and the ability to adapt to subsequent environmental disturbances.

  14. Integrating landscape ecology and geoinformatics to decipher landscape dynamics for regional planning.

    PubMed

    Dikou, Angela; Papapanagiotou, Evangelos; Troumbis, Andreas

    2011-09-01

    We used remote sensing and GIS in conjunction with multivariate statistical methods to: (i) quantify landscape composition (land cover types) and configuration (patch density, diversity, fractal dimension, contagion) for five coastal watersheds of Kalloni gulf, Lesvos Island, Greece, in 1945, 1960, 1971, 1990 and 2002/2003, (ii) evaluate the relative importance of physical (slope, geologic substrate, stream order) and human (road network, population density) variables on landscape composition and configuration, and (iii) characterize processes that led to land cover changes through land cover transitions between these five successive periods in time. Distributions of land cover types did not differ among the five time periods at the five watersheds studied because the largest cumulative changes between 1945 and 2002/2003 did not take place at dominant land cover types. Landscape composition related primarily to the physical attributes of the landscape. Nevertheless, increase in population density and the road network were found to increase heterogeneity of the landscape mosaic (patchiness), complexity of patch shape (fractal dimension), and patch disaggregation (contagion). Increase in road network was also found to increase landscape diversity due to the creation of new patches. The main processes involved in land cover changes were plough-land abandonment and ecological succession. Landscape dynamics during the last 50 years corroborate the ecotouristic-agrotouristic model for regional development to reverse trends in agricultural land abandonment and human population decline and when combined with hypothetical regulatory approaches could predict how this landscape could develop in the future, thus, providing a valuable tool to regional planning.

  15. The 12th June 2017 Mw = 6.3 Lesvos earthquake from detailed seismological observations

    NASA Astrophysics Data System (ADS)

    Papadimitriou, P.; Kassaras, I.; Kaviris, G.; Tselentis, G.-A.; Voulgaris, N.; Lekkas, E.; Chouliaras, G.; Evangelidis, C.; Pavlou, K.; Kapetanidis, V.; Karakonstantis, A.; Kazantzidou-Firtinidou, D.; Fountoulakis, I.; Millas, C.; Spingos, I.; Aspiotis, T.; Moumoulidou, A.; Skourtsos, E.; Antoniou, V.; Andreadakis, E.; Mavroulis, S.; Kleanthi, M.

    2018-04-01

    A major earthquake (Mwö=ö6.3) occurred on the 12th of June 2017 (12:28 GMT) offshore, south of the SE coast of Lesvos Island, at a depth of 13ökm, in an area characterized by normal faulting with an important strike-slip component in certain cases. Over 900 events of the sequence between 12 and 30 June 2017 were manually analyzed and located, employing an optimized local velocity model. Double-difference relocation revealed seven spatially separated groups of events, forming two linear branches, roughly aligned N130°E, compatible with the strike of known mapped faults along the southern coast of Lesvos Island. Spatiotemporal analysis indicated gradual migration of seismicity towards NW and SE from the margins of the main rupture, while a strong secondary sequence at a separate fault patch SE of the mainshock, oriented NW-SE, was triggered by the largest aftershock (Mwö=ö5.2) that occurred on 17 June. The focal mechanisms of the mainshock (φö=ö122°, δö=ö40° and λö=ö-83°) and of the major aftershocks were determined using regional moment tensor inversion. In most cases normal faulting was revealed with the fault plane oriented in a NW-SE direction, dipping SW, with the exception of the largest aftershock that was characterized by strike-slip faulting. Stress inversion revealed a complex stress field south of Lesvos, related both to normal, in an approximate E-W direction, and strike-slip faulting. All aftershocks outside the main rupture, where gradual seismicity migration was observed, are located within the positive lobes of static stress transfer determined by applying the Coulomb criterion for the mainshock. Stress loading on optimal faults under a strike-slip regime explains the occurrence of the largest aftershock and the seismicity that was triggered at the eastern patch of the rupture zone.

  16. Organochlorine and metal contaminant exposure and effects in hatching Black-Crowned Night Herons (Nycticorax nycticorax) in Delaware Bay

    USGS Publications Warehouse

    Rattner, B.A.; Hoffman, D.J.; Melancon, M.J.; Olsen, Glenn H.; Schmidt, S.R.; Parsons, K.C.

    2000-01-01

    Pea Patch Island in Delaware Bay is the site of the largest heronry north of Florida. From 1989-93, the population of nine species of wading birds numbered approximately 12,000 pairs, but has recently declined to about 7,000 pairs. Because Delaware Bay is a major shipping channel and receives anthropogenic releases of toxic substances from agricultural, industrial, and municipal point and non-point sources, contaminant exposure and effects to the heronry have been an ongoing concern. In 1997, pipping (early hatching stage) black-crowned night herons (Nycticorax nycticorax) were collected from separate nests at Pea Patch Island and from a coastal reference site, Middle Island in Rehoboth Bay, Delaware. There was no evidence of malformations or hepatic histopathological lesions in embryos, and their body and liver weights did not differ between sites. Biomarkers of petroleum hydrocarbons, polyhalogenated contaminant, and metal exposure (cytochrome P450 induction and oxidative stress responses) did not differ (p > 0.05) between sites, although activities of benzyloxy-O-dealkylase and ethoxyresorufin-O-dealkylase were somewhat elevated in 3 of the 15 embryos collected from Pea Patch Island. Concentrations of 21 organochlorine pesticides and metabolites were relatively low at both sites, with p,p'-DDE values well below the threshold associated with eggshell thinning. Although total PCB concentration was modestly elevated (p < 0.05) in Pea Patch Island heron embryos, levels of arylhydrocarbon receptor-active PCB congeners, polychlorinated dibenzodioxins and dibenzofurans, and toxic equivalents were low and did not differ between sites. Concentrations of Cd and Mn in pipping embryos from Pea Patch Island were slightly greater (p < 0.05) than values observed in Middle Island embryos, but levels of these and the other metals and metalloids (e.g., Hg and Se) were below values associated with toxicity. In conclusion, it seems unlikely that chlorinated hydrocarbon and metal contaminant exposure constitutes a direct threat to the reproductive success of black-crowned night herons at Pea Patch Island. However, low-level exposure to these contaminants may constitute one of many stressors that in combination could adversely affect the stability of the wading bird population at this large heronry.

  17. The rationale for intensity-modulated proton therapy in geometrically challenging cases

    NASA Astrophysics Data System (ADS)

    Safai, S.; Trofimov, A.; Adams, J. A.; Engelsman, M.; Bortfeld, T.

    2013-09-01

    Intensity-modulated proton therapy (IMPT) delivered with beam scanning is currently available at a limited number of proton centers. However, a simplified form of IMPT, the technique of field ‘patching’, has long been a standard practice in proton therapy centers. In field patching, different parts of the target volume are treated from different directions, i.e., a part of the tumor gets either full dose from a radiation field, or almost no dose. Thus, patching represents a form of binary intensity modulation. This study explores the limitations of the standard binary field patching technique, and evaluates possible dosimetric advantages of continuous dose modulations in IMPT. Specifics of the beam delivery technology, i.e., pencil beam scanning versus passive scattering and modulation, are not investigated. We have identified two geometries of target volumes and organs at risk (OAR) in which the use of field patching is severely challenged. We focused our investigations on two patient cases that exhibit these geometries: a paraspinal tumor case and a skull-base case. For those cases we performed treatment planning comparisons of three-dimensional conformal proton therapy (3DCPT) with field patching versus IMPT, using commercial and in-house software, respectively. We also analyzed the robustness of the resulting plans with respect to systematic setup errors of ±1 mm and range errors of ±2.5 mm. IMPT is able to better spare OAR while providing superior dose coverage for the challenging cases identified above. Both 3DCPT and IMPT are sensitive to setup errors and range uncertainties, with IMPT showing the largest effect. Nevertheless, when delivery uncertainties are taken into account IMPT plans remain superior regarding target coverage and OAR sparing. On the other hand, some clinical goals, such as the maximum dose to OAR, are more likely to be unmet with IMPT under large range errors. IMPT can potentially improve target coverage and OAR sparing in challenging cases, even when compared with the relatively complicated and time consuming field patching technique. While IMPT plans tend to be more sensitive to delivery uncertainties, their dosimetric advantage generally holds. Robust treatment planning techniques may further reduce the sensitivity of IMPT plans.

  18. Gain enhancement with near-zero-index metamaterial superstrate

    NASA Astrophysics Data System (ADS)

    Bouzouad, M.; Chaker, S. M.; Bensafielddine, D.; Laamari, E. M.

    2015-11-01

    The objective of this paper was to use a near-zero-index ( n) metamaterial as a single- or a double-layer superstrate suspended above a microstrip patch antenna, operating at 43 GHz, for the gain enhancement. The single metamaterial layer superstrate consists of a periodic arrangement of Jerusalem cross unit cells and behaves as an homogeneous medium characterized by a refractive index close to zero. This metamaterial property allows gathering radiated waves from the antenna and collimates them toward the superstrate normal direction. The proposed design improves the antenna gain by 5.1 dB with the single-layer superstrate and 7 dB with the double-layer superstrate.

  19. Green’s Functions for a Theoretical Model of an Aperture Fed Stacked-Patch Microstrip Antenna

    DTIC Science & Technology

    1989-12-01

    44 4 - 1 Normalized values of D bk3b on the real axis for (a) f = 4 GHz, bib = 1.6 mm, b2b = 4.8 mm, Flb = 5 o’ 2b = 2.5 Eo’ 3b = Co, P’lb = 2b...dielectric la. bIb Thickness of dielectric lb. b2b Total thickness of dielectrics lb and 2b. Cli Observer cell on the aperture, i is an index variable...interface 3b (patch 2). Sfj Source current cell on the feedline. tb Thickness of dielectric layer 2b ( b2b - bib). T lj Vector rooftop basis function

  20. 2017 Valparaíso earthquake sequence and the megathrust patchwork of central Chile

    NASA Astrophysics Data System (ADS)

    Nealy, Jennifer L.; Herman, Matthew W.; Moore, Ginevra L.; Hayes, Gavin P.; Benz, Harley M.; Bergman, Eric A.; Barrientos, Sergio E.

    2017-09-01

    In April 2017, a sequence of earthquakes offshore Valparaíso, Chile, raised concerns of a potential megathrust earthquake in the near future. The largest event in the 2017 sequence was a M6.9 on 24 April, seemingly colocated with the last great-sized earthquake in the region—a M8.0 in March 1985. The history of large earthquakes in this region shows significant variation in rupture size and extent, typically highlighted by a juxtaposition of large ruptures interspersed with smaller magnitude sequences. We show that the 2017 sequence ruptured an area between the two main slip patches during the 1985 earthquake, rerupturing a patch that had previously slipped during the October 1973 M6.5 earthquake sequence. A significant gap in historic ruptures exists directly to the south of the 2017 sequence, with large enough moment deficit to host a great-sized earthquake in the near future, if it is locked.

  1. The analysis of initial Juno magnetometer data using a sparse magnetic field representation

    NASA Astrophysics Data System (ADS)

    Moore, Kimberly M.; Bloxham, Jeremy; Connerney, John E. P.; Jørgensen, John L.; Merayo, José M. G.

    2017-05-01

    The Juno spacecraft, now in polar orbit about Jupiter, passes much closer to Jupiter's surface than any previous spacecraft, presenting a unique opportunity to study the largest and most accessible planetary dynamo in the solar system. Here we present an analysis of magnetometer observations from Juno's first perijove pass (PJ1; to within 1.06 RJ of Jupiter's center). We calculate the residuals between the vector magnetic field observations and that calculated using the VIP4 spherical harmonic model and fit these residuals using an elastic net regression. The resulting model demonstrates how effective Juno's near-surface observations are in improving the spatial resolution of the magnetic field within the immediate vicinity of the orbit track. We identify two features resulting from our analyses: the presence of strong, oppositely signed pairs of flux patches near the equator and weak, possibly reversed-polarity patches of magnetic field over the polar regions. Additional orbits will be required to assess how robust these intriguing features are.

  2. 2017 Valparaíso earthquake sequence and the megathrust patchwork of central Chile

    USGS Publications Warehouse

    Nealy, Jennifer; Herman, Matthew W.; Moore, Ginevra; Hayes, Gavin; Benz, Harley M.; Bergman, Eric A.; Barrientos, Sergio E

    2017-01-01

    In April 2017, a sequence of earthquakes offshore Valparaíso, Chile, raised concerns of a potential megathrust earthquake in the near future. The largest event in the 2017 sequence was a M6.9 on 24 April, seemingly colocated with the last great-sized earthquake in the region—a M8.0 in March 1985. The history of large earthquakes in this region shows significant variation in rupture size and extent, typically highlighted by a juxtaposition of large ruptures interspersed with smaller magnitude sequences. We show that the 2017 sequence ruptured an area between the two main slip patches during the 1985 earthquake, rerupturing a patch that had previously slipped during the October 1973 M6.5 earthquake sequence. A significant gap in historic ruptures exists directly to the south of the 2017 sequence, with large enough moment deficit to host a great-sized earthquake in the near future, if it is locked.

  3. DCT-based iris recognition.

    PubMed

    Monro, Donald M; Rakshit, Soumyadip; Zhang, Dexin

    2007-04-01

    This paper presents a novel iris coding method based on differences of discrete cosine transform (DCT) coefficients of overlapped angular patches from normalized iris images. The feature extraction capabilities of the DCT are optimized on the two largest publicly available iris image data sets, 2,156 images of 308 eyes from the CASIA database and 2,955 images of 150 eyes from the Bath database. On this data, we achieve 100 percent Correct Recognition Rate (CRR) and perfect Receiver-Operating Characteristic (ROC) Curves with no registered false accepts or rejects. Individual feature bit and patch position parameters are optimized for matching through a product-of-sum approach to Hamming distance calculation. For verification, a variable threshold is applied to the distance metric and the False Acceptance Rate (FAR) and False Rejection Rate (FRR) are recorded. A new worst-case metric is proposed for predicting practical system performance in the absence of matching failures, and the worst case theoretical Equal Error Rate (EER) is predicted to be as low as 2.59 x 10(-4) on the available data sets.

  4. Montreal, Quebec, Canada as seen from STS-60

    NASA Technical Reports Server (NTRS)

    1994-01-01

    The city of Montreal is located on the island of Montreal at the confluence of the St. Lawrence and Ottawa Rivers. Despite its distance from the sea (1,000 miles) Montreal is a large inland port. It is also Canada's largest city and the second largest French speaking city in the world. This particular snow covered scene highlights the major highways and street patterns throughout the metropolitan Montreal area. The runways of the two large international airports of Mirabel (located 25 miles northwest of downtown Montreal) and Dorval (located approximately 8 miles west of the downtown area) are clearly visible on this photograph. Even the outline of Mount Royal Park, near downtown central business district, can be seen. Patches of open, ice-free water (very dark areas) are detectable as the St. Lawrence River (Seaway) makes its way along the south and southeastern side of Montreal.

  5. Montreal, Quebec, Canada as seen from STS-60

    NASA Image and Video Library

    1994-02-09

    STS060-94-072 (3-11 Feb 1994) --- The city of Montreal is located on the island of Montreal at the confluence of the St. Lawrence and Ottawa Rivers. Despite its distance from the sea (1,000 miles) Montreal is a large inland port. It is also Canada's largest city and the second largest French speaking city in the world. This particular snow covered scene highlights the major highways and street patterns throughout the metropolitan Montreal area. The runways of the two large international airports of Mirabel (located 25 miles northwest of downtown Montreal) and Dorval (located approximately 8 miles west of the downtown area) are clearly visible on this photograph. Even the outline of Mount Royal Park, an imposing hilly feature near the downtown central business district, can be seen. Patches of open, ice-free (very dark areas) are detectable as the St. Lawrence River (Seaway) makes its way along the south and southeastern side of Montreal.

  6. Biopolymeric mucoadhesive bilayer patch of pravastatin sodium for buccal delivery and treatment of patients with atherosclerosis.

    PubMed

    Yedurkar, Pramod; Dhiman, Munish Kumar; Petkar, Kailash; Sawant, Krutika

    2013-05-01

    Mucoadhesive bilayer buccal patch has been developed to improve the bioavailability and therapeutic efficacy along with providing sustained release of pravastatin sodium. Buccal patches comprising of varying composition of Carbopol 934P and HPMC K4M were designed and characterized for surface pH, swelling index, in vitro bioadhesion, mechanical properties, in vitro drug release and in vivo pharmacokinetic and pharmacodynamics performance. All formulations exhibited satisfactory technological parameters and followed non-fickian drug release mechanism. Bilayer buccal patch containing Carbopol 934P and HPMC K4M in 4:6 ratio (PBP5) was considered optimum in terms of swelling, mucoadhesion, mechanical properties and in vitro release profile. Pharmacokinetic studies in rabbits showed significantly higher (p < 0.05) Cmax (75.63 ± 6.98 ng/mL), AUC(0-8) (311.10 ± 5.89 ng/mL/h) and AUC(0-∞) (909.42 ± 5.89 ng/mL/h) than pravastatin oral tablet (Cmax - 67.40 ± 9.23 ng/mL, AUC(0-8)-130.33 ± 10.25 ng/mL/h and AUC(0-∞)-417.17 ± 5.89 ng/mL/h)). While, increased tmax of buccal patch indicated its sustained release property in comparison to oral tablet. Pharmacodynamic studies in rabbits showed statistically significant difference (p < 0.005) in the reduction of TG (131.10 ± 10.23 mg/dL), VLDL (26.00 ± 2.56 mg/dL) and LDL level (8.99 ± 3.01 mg/dL) as compared to oral conventional tablet. In conclusion, bioavailability from the developed buccal patch of pravastatin was 2.38 times higher than the oral dosage form, indicating its therapeutic potential in the treatment of atherosclerosis.

  7. Repeated Methamphetamine Administration Differentially Alters Fos Expression in Caudate-Putamen Patch and Matrix Compartments and Nucleus Accumbens

    PubMed Central

    Jedynak, Jakub P.; Cameron, Courtney M.; Robinson, Terry E.

    2012-01-01

    Background The repeated administration of psychostimulant drugs produces a persistent and long-lasting increase (“sensitization”) in their psychomotor effects, which is thought to be due to changes in the neural circuitry that mediate these behaviors. One index of neuronal activation used to identify brain regions altered by repeated exposure to drugs involves their ability to induce immediate early genes, such as c-fos. Numerous reports have demonstrated that past drug experience alters the ability of drugs to induce c-fos in the striatum, but very few have examined Fos protein expression in the two major compartments in the striatum—the so-called patch/striosome and matrix. Methodology/Principal Findings In the present study, we used immunohistochemistry to investigate the effects of pretreatment with methamphetamine on the ability of a subsequent methamphetamine challenge to induce Fos protein expression in the patch and matrix compartments of the dorsolateral and dorsomedial caudate-putamen and in the ventral striatum (nucleus accumbens). Animals pretreated with methamphetamine developed robust psychomotor sensitization. A methamphetamine challenge increased the number of Fos-positive cells in all areas of the dorsal and ventral striatum. However, methamphetamine challenge induced Fos expression in more cells in the patch than in the matrix compartment in the dorsolateral and dorsomedial caudate-putamen. Furthermore, past experience with methamphetamine increased the number of methamphetamine-induced Fos positive cells in the patch compartment of the dorsal caudate putamen, but not in the matrix or in the core or shell of the nucleus accumbens. Conclusions/Significance These data suggest that drug-induced alterations in the patch compartment of the dorsal caudate-putamen may preferentially contribute to some of the enduring changes in brain activity and behavior produced by repeated treatment with methamphetamine. PMID:22514626

  8. Repeated methamphetamine administration differentially alters fos expression in caudate-putamen patch and matrix compartments and nucleus accumbens.

    PubMed

    Jedynak, Jakub P; Cameron, Courtney M; Robinson, Terry E

    2012-01-01

    The repeated administration of psychostimulant drugs produces a persistent and long-lasting increase ("sensitization") in their psychomotor effects, which is thought to be due to changes in the neural circuitry that mediate these behaviors. One index of neuronal activation used to identify brain regions altered by repeated exposure to drugs involves their ability to induce immediate early genes, such as c-fos. Numerous reports have demonstrated that past drug experience alters the ability of drugs to induce c-fos in the striatum, but very few have examined Fos protein expression in the two major compartments in the striatum--the so-called patch/striosome and matrix. In the present study, we used immunohistochemistry to investigate the effects of pretreatment with methamphetamine on the ability of a subsequent methamphetamine challenge to induce Fos protein expression in the patch and matrix compartments of the dorsolateral and dorsomedial caudate-putamen and in the ventral striatum (nucleus accumbens). Animals pretreated with methamphetamine developed robust psychomotor sensitization. A methamphetamine challenge increased the number of Fos-positive cells in all areas of the dorsal and ventral striatum. However, methamphetamine challenge induced Fos expression in more cells in the patch than in the matrix compartment in the dorsolateral and dorsomedial caudate-putamen. Furthermore, past experience with methamphetamine increased the number of methamphetamine-induced Fos positive cells in the patch compartment of the dorsal caudate putamen, but not in the matrix or in the core or shell of the nucleus accumbens. These data suggest that drug-induced alterations in the patch compartment of the dorsal caudate-putamen may preferentially contribute to some of the enduring changes in brain activity and behavior produced by repeated treatment with methamphetamine.

  9. A Randomized Trial Comparing Bangerter Filters and Patching for the Treatment of Moderate Amblyopia in Children

    PubMed Central

    2009-01-01

    Objective To determine whether visual acuity improvement with Bangerter filters is similar to improvement with patching as initial therapy for children with moderate amblyopia. Design Randomized clinical trial. Participants 186 children, 3 to <10 years old, with moderate amblyopia (20/40 to 20/80). Methods Children were randomly assigned to receive either daily patching or to use a Bangerter filter on the spectacle lens in front of the fellow eye. Study visits were scheduled at 6, 12, 18 and 24 weeks. Main outcome measure Visual acuity in amblyopic eye at 24 weeks. Results At 24 weeks, amblyopic eye improvement averaged 1.9 lines in the Bangerter group and 2.3 lines in the patching group (difference in mean visual acuities between groups adjusted for baseline acuity = 0.38 line). The upper limit of a 1-sided 95% confidence interval was 0.76 line, which slightly exceeded a pre-specified non-inferiority limit of < 0.75 line. Similar percentages of subjects in each group improved ≥3 lines (Bangerter group 38% versus patching group 35%, P=0.61) or had 20/25 or better amblyopic eye acuity (36% versus 31%, respectively, P=0.86). There was a lower treatment burden in the Bangerter group as measured with the Amblyopia Treatment Index. With Bangerter filters, neither a fixation switch to the amblyopic eye nor induced blurring in the fellow eye to worse than that of the amblyopic eye was required for visual acuity improvement. Conclusion Because the average difference in visual acuity improvement between Bangerter filters and patching was less than half a line, and there was lower burden of treatment on the child and family, Bangerter filter treatment is a reasonable option to consider for initial treatment of moderate amblyopia. PMID:20163869

  10. Localizing tuberculosis in chest radiographs with deep learning

    NASA Astrophysics Data System (ADS)

    Xue, Zhiyun; Jaeger, Stefan; Antani, Sameer; Long, L. Rodney; Karargyris, Alexandros; Siegelman, Jenifer; Folio, Les R.; Thoma, George R.

    2018-03-01

    Chest radiography (CXR) has been used as an effective tool for screening tuberculosis (TB). Because of the lack of radiological expertise in resource-constrained regions, automatic analysis of CXR is appealing as a "first reader". In addition to screening the CXR for disease, it is critical to highlight locations of the disease in abnormal CXRs. In this paper, we focus on the task of locating TB in CXRs which is more challenging due to the intrinsic difficulty of locating the abnormality. The method is based on applying a convolutional neural network (CNN) to classify the superpixels generated from the lung area. Specifically, it consists of four major components: lung ROI extraction, superpixel segmentation, multi-scale patch generation/labeling, and patch classification. The TB regions are located by identifying those superpixels whose corresponding patches are classified as abnormal by the CNN. The method is tested on a publicly available TB CXR dataset which contains 336 TB images showing various manifestations of TB. The TB regions in the images were marked by radiologists. To evaluate the method, the images are split into training, validation, and test sets with all the manifestations being represented in each set. The performance is evaluated at both the patch level and image level. The classification accuracy on the patch test set is 72.8% and the average Dice index for the test images is 0.67. The factors that may contribute to misclassification are discussed and directions for future work are addressed.

  11. Relationships between landscape pattern, wetland characteristics, and water quality in agricultural catchments.

    PubMed

    Moreno-Mateos, David; Mander, Ulo; Comín, Francisco A; Pedrocchi, César; Uuemaa, Evelyn

    2008-01-01

    Water quality in streams is dependent on landscape metrics at catchment and wetland scales. A study was undertaken to evaluate the correlation between landscape metrics, namely patch density and area, shape, heterogeneity, aggregation, connectivity, land-use ratio, and water quality variables (salinity, nutrients, sediments, alkalinity, other potential pollutants and pH) in the agricultural areas of a semiarid Mediterranean region dominated by irrigated farmlands (NE Spain). The study also aims to develop wetland construction criteria in agricultural catchments. The percentage of arable land and landscape homogeneity (low value of Simpson index) are significantly correlated with salinity (r(2) = 0.72) and NO(3)-N variables (r(2) = 0.49) at catchment scale. The number of stock farms was correlated (Spearman's corr. = 0.60; p < 0.01) with TP concentration in stream water. The relative abundance of wetlands and the aggregation of its patches influence salinity variables at wetland scale (r(2) = 0.59 for Na(+) and K(+) concentrations). The number and aggregation of wetland patches are closely correlated to the landscape complexity of catchments, measured as patch density (r(2) = 0.69), patch size (r(2) = 0.53), and landscape heterogeneity (r(2) = 0.62). These results suggest that more effective results in water quality improvement would be achieved if we acted at both catchment and wetland scales, especially reducing landscape homogeneity and creating numerous wetlands scattered throughout the catchment. A set of guidelines for planners and decision makers is provided for future agricultural developments or to improve existing ones.

  12. Assessing forest fragmentation metrics from forest inventory cluster samples

    Treesearch

    Christoph Kleinn

    2000-01-01

    Fragmentation of forest area plays an important role in the ongoing discussion of forest dynamics and biological and ecosystem diversity. Among its contributing factors are size, shape, number, and spatial arrangement of forest patches. Several metrics and indexes are in use, predominantly in quantitative landscape ecology. An important area of interest is the...

  13. Postmarketing study of ORTHO EVRA and levonorgestrel oral contraceptives containing hormonal contraceptives with 30 mcg of ethinyl estradiol in relation to nonfatal venous thromboembolism.

    PubMed

    Jick, Susan S; Hagberg, Katrina W; Hernandez, Rohini K; Kaye, James A

    2010-01-01

    Concern has been raised that the risk of venous thromboembolism (VTE) in users of the ORTHO EVRA patch is higher compared to users of oral contraceptives (OCs). We identified idiopathic cases of VTE and controls, matched on age and index date, from among women in the United States PharMetrics/IMS and MarketScan databases who were current users of the patch or levonorgestrel-containing OCs with 30 mcg of ethinyl estradiol. We calculated odds ratios (ORs) and 95% confidence intervals (CIs). The ORs (95% CI) for VTE in users of the patch compared to levonorgestrel-containing OCs were 2.0 (0.9-4.1) and 1.3 (0.8-2.1) in the PharMetrics and MarketScan databases, respectively. ORs (95% CI) restricted to women aged 39 years or younger were 1.4 (0.6-3.0) and 1.2 (0.7-2.0), respectively. These results provide evidence that the risk of idiopathic VTE in users of the patch is not materially different than that of users of levonorgestrel-containing OCs in women aged 39 years or younger. We cannot rule out some increase in the risk in women aged 40 years or older.

  14. Detectability and acceptability of continuous pulse signals for the MemoPatch® device, an electronic skin patch intended to deliver tactile medication reminder signals

    PubMed Central

    Abraham, Ivo; De Geest, Jan; De Geest, Wim; De Troy, Elke; MacDonald, Karen

    2015-01-01

    Background Unintended forgetfulness is the most common cause of medication nonadherence. MemoPatch® is an electronic skin patch intended to deliver discreet tactile medication reminder stimuli. This study aimed 1) to evaluate, within an experimental setup, the detectability and acceptability of fifteen continuous bipolar pulse signals; 2) to identify variables, if any, associated with differential perception of the candidate reminder signals; and 3) to collect safety data as reported by subjects or observed by staff. Methods This was a laboratory experiment involving 147 healthy adult volunteers (55.1% female, 98.0% Caucasian, with age 41.8±16.0 years, body mass index [BMI] 24.7±4.4, upper body adiposity 28.5%±8.3% body fat, and skin impedance 367.6±140.8 Ω) and using an experimental version of the MemoPatch®. Following four training signals administered in fixed order, subjects were exposed to a set of fifteen randomly sequenced signals varying in rise and fall time, width, and current, to be rated in terms of detectability (“too weak”, “appropriate”, or “too strong”) and acceptability. Results Ratings of “appropriate” were virtually independent of such variables as sex, BMI, upper body adiposity, and skin impedance at the patch location. Five signals were rated as “appropriate” by ≥67% of subjects and acceptable by ≥95% of subjects, virtually independently of the indicators of interest, and were retained as candidate signals for use in next stages of development and commercialization. Nine adverse events, none serious, were observed in six subjects. Conclusion This study yielded five effective and safe candidate signals for potential use in the MemoPatch® device, all equally considered to be of appropriate detectability and high acceptability, in an experimental context. The signals were independent from, and therefore highly robust relative to, sex, BMI, upper body adiposity, and skin impedance at the patch site, lending additional generalizability to the signals and hence their potential relevance to broad commercial application. PMID:25709509

  15. Detectability and acceptability of continuous pulse signals for the MemoPatch(®) device, an electronic skin patch intended to deliver tactile medication reminder signals.

    PubMed

    Abraham, Ivo; De Geest, Jan; De Geest, Wim; De Troy, Elke; MacDonald, Karen

    2015-01-01

    Unintended forgetfulness is the most common cause of medication nonadherence. MemoPatch(®) is an electronic skin patch intended to deliver discreet tactile medication reminder stimuli. This study aimed 1) to evaluate, within an experimental setup, the detectability and acceptability of fifteen continuous bipolar pulse signals; 2) to identify variables, if any, associated with differential perception of the candidate reminder signals; and 3) to collect safety data as reported by subjects or observed by staff. This was a laboratory experiment involving 147 healthy adult volunteers (55.1% female, 98.0% Caucasian, with age 41.8±16.0 years, body mass index [BMI] 24.7±4.4, upper body adiposity 28.5%±8.3% body fat, and skin impedance 367.6±140.8 Ω) and using an experimental version of the MemoPatch(®). Following four training signals administered in fixed order, subjects were exposed to a set of fifteen randomly sequenced signals varying in rise and fall time, width, and current, to be rated in terms of detectability ("too weak", "appropriate", or "too strong") and acceptability. Ratings of "appropriate" were virtually independent of such variables as sex, BMI, upper body adiposity, and skin impedance at the patch location. Five signals were rated as "appropriate" by ≥67% of subjects and acceptable by ≥95% of subjects, virtually independently of the indicators of interest, and were retained as candidate signals for use in next stages of development and commercialization. Nine adverse events, none serious, were observed in six subjects. This study yielded five effective and safe candidate signals for potential use in the MemoPatch(®) device, all equally considered to be of appropriate detectability and high acceptability, in an experimental context. The signals were independent from, and therefore highly robust relative to, sex, BMI, upper body adiposity, and skin impedance at the patch site, lending additional generalizability to the signals and hence their potential relevance to broad commercial application.

  16. Organochlorine contaminant exposure and effects in pipping black-crowned night-herons in Delaware Bay

    USGS Publications Warehouse

    Rattner, B.A.; Hoffman, D.J.; Melancon, M.J.; Olsen, Glenn H.; Parsons, K.C.; Schmidt, S.R.

    1998-01-01

    Pea Patch Island in Delaware Bay is the site of the largest heronry north of Florida. From 1989-93. the population of 9 species of wading birds numbered approximately 12,000 pairs. but has recently declined to 7,000 pairs. Because Delaware Bay is a major shipping channel. and receives anthropogenic releases of toxic substances from agricultural, industrial and municipal point and nonpoint sources, contaminant exposure and effects to the heronry have been an ongoing concern. In 1997, piping black-crowned night-herons (BCNHs) wee collected from separate nests at Pea Patch Island (N=l5), and from a coastal reference site, Middle Island (N=9), in Rehoboth Bay. DE. There was neither evidence of malformations nor hepatic histopathological lesions, and body and liver weights did not differ between sites. Biomarkers of petroleum hydrocarbons, polyhalogenated contaminant and metal exposure (cytochrome P450 induction and oxidative stress responses) did not differ (P>0.05) between sites, however, activities of benzyloxy- and ethoxyresorufin-O-dealkylase were greater in 3 of 15 embryos from Pea Patch Island compared to Middle Island. Concentrations of 21 organochlorine pesticides and metabolites were relatively low at both sites. with p,.p'DDE values well below the threshold associated with eggshell thinning. Although total PCB concentration was modestly elevated (P<0.05) in Pea Patch Island BCNH embryos, levels of axylhydrocarbon-receptor active PCB congeners. dioxins, dibenzofurans and Toxic Equivalents were low and did not differ between sites. Surprisingly, organochlorine contaminant exposure and effects in Delaware Bay BCNHs appear to be considerably less than that observed and recently reported (ETC 16:2315-2322,1997) for herons residing in the Chesapeake Bay.

  17. Exp25PatchFinal-names

    NASA Image and Video Library

    2010-05-05

    ISS025-S-001 (June 2010) --- The mission patch design for the 25th Expedition to the International Space Station (ISS) pays tribute to the rich history of innovation and bold engineering in the quest for knowledge, exploration and discovery in space. The patch highlights the symbolic passing of the torch to the ISS, as the vehicle that will carry us into the future of space exploration. The Space Shuttle Program emblem is the foundation of the patch and forms the Greek letter Omega?, paying tribute to the culmination of the Space Shuttle Program. The mission designation 25? and the Earth crescent, the orbiter is shown returning to Earth on its final journey, during the Expedition 25 mission. Above Earth and the breaking dawn, the ISS takes center-stage, completed and fully equipped to carry us beyond this new dawn to new voyages and discoveries. The orbit connecting the ISS and the Earth is drawn in the colors of the United States and Russian flags; paying tribute to the blended heritage of the crew. The two largest stars in the field represent the arrival and departure of the crews in separate Russian Soyuz vehicles. The six stars in the field represent the six crew members. The International Space Station abbreviation MKC? ? in English and Russian, respectively- flank the mission number designation, and the names of the crew members in their native languages border the ISS symbol. The NASA insignia design for shuttle and space station flights is reserved for use by the astronauts and for other official use as the NASA Administrator may authorize. Public availability has been approved only in the form of illustrations by the various news media. When and if there is any change in this policy, which is not anticipated, it will be publicly announced.

  18. Carbon fluxes in a heterogeneous estuarine wetland in Northern Ohio. Comparing eddy covariance and chamber measurements

    NASA Astrophysics Data System (ADS)

    Rey Sanchez, C.; Morin, T. H.; Stefanik, K. C.; Wrighton, K. C.; Bohrer, G.

    2016-12-01

    Wetlands are important carbon dioxide (CO2) sinks but also the largest source of methane (CH4), a powerful greenhouse gas. Wetlands are often heterogeneous landscapes with highly diverse land covers and different paths of CH4 release and CO2 uptake. Understanding the ecosystem level greenhouse gas budget of a wetland involves understanding several carbon fluxes associated with each of the different land cover patches. We studied CO2 and CH4 fluxes from different land cover types at the Old Woman Creek (OWC) National Estuarine Research Reserve, at the Lake Erie shore in Northern Ohio. OWC is composed of four main types of land cover: open water, emergent cattail vegetation (Typha spp), floating vegetation (Nelimbo spp), and mud flats. CH4 and CO2 gas exchange was measured in each patch type using enclosed chambers monthly during the growing seasons of 2015 and 2016. During the same period of time, an eddy covariance tower was deployed in a representative section of the wetland to measure continuous site-level CO2 and CH4 fluxes. A footprint model was used to account for the relative contributions of each patch type to the flux measured by the tower. The chamber measurements were used to constrain the contributions of each patch within the flux tower footprint, and to correct the flux measurements to the whole-wetland total flux. We analyzed the spatial and temporal variability of methane and carbon dioxide and related this variation to some of the most important environmental drivers at the site. We used these data to analyze the implications of different arrangements of land cover types on the carbon balance and greenhouse-gas budget in wetlands.

  19. Specific absorption rate analysis of broadband mobile antenna with negative index metamaterial

    NASA Astrophysics Data System (ADS)

    Alam, Touhidul; Faruque, Mohammad Rashed Iqbal; Islam, Mohammad Tariqul

    2016-03-01

    This paper presents a negative index metamaterial-inspired printed mobile wireless antenna that can support most mobile applications such as GSM, UMTS, Bluetooth and WLAN frequency bands. The antenna consists of a semi-circular patch, a 50Ω microstrip feed line and metamaterial ground plane. The antenna occupies a very small space of 37 × 47 × 0.508 mm3, making it suitable for mobile wireless application. The perceptible novelty shown in this proposed antenna is that reduction of specific absorption rate using the negative index metamaterial ground plane. The proposed antenna reduced 72.11 and 75.53 % of specific absorption rate at 1.8 and 2.4 GHz, respectively.

  20. The endoventricular circular patch plasty ("Dor procedure") in ischemic akinetic dilated ventricles.

    PubMed

    Dor, V

    2001-09-01

    From 1984 to 2000, 950 Left Ventricular ischemic asynergy (dyskinetic or akinetic) were operated using the endoventricular circular patch plasty technique. This allows to exclude all asynergic areas of the left ventricular wall and reshape the remaining wall. Both morphology and hemodynamic of left ventricle, are improved. Hospital mortality was below 7%. Life expectancy at 10 years reaches 80% if pre-operative L.V.E.F. is above 30%, and end systolic volume index (E.S.V.I.) below 90[emsp4 ]ml, and 60% in L.V.E.F. is below 30% and E.S.V.I. above 90[emsp4 ]ml. L.V.R. by endoventricular plasty has to be considered in the treatment of ischemic congestive heart failure.

  1. Spatial variation of fuel loading within varying aged stands of chaparral

    Treesearch

    Kellie A. Uyeda; Douglas A. Stow; John F. O' Leary; Ian T. Schmidt; Philip J. Riggan

    2016-01-01

    Questions: How do stand-level biomass and percentage of deadmaterial in chaparral vary as a function of stand age? How do the landscape properties of aggregation index and patch size vary in each of the dominant species groups as a function of stand age? Location: Stands of 7-, 28-and 68-yr-old...

  2. Comparing Urinary Biomarkers of Airborne and Dermal Exposure to Polycyclic Aromatic Compounds in Asphalt-Exposed Workers

    PubMed Central

    Sobus, Jon R.; McClean, Michael D.; Herrick, Robert F.; Waidyanatha, Suramya; Nylander-French, Leena A.; Kupper, Lawrence L.; Rappaport, Stephen M.

    2009-01-01

    When working with hot mix asphalt, road pavers are exposed to polycyclic aromatic hydrocarbons (PAHs) through the inhalation of vapors and particulate matter (PM) and through dermal contact with PM and contaminated surfaces. Several PAHs with four to six rings are potent carcinogens which reside in these particulate emissions. Since urinary biomarkers of large PAHs are rarely detectable in asphalt workers, attention has focused upon urinary levels of the more volatile and abundant two-ring and three-ring PAHs as potential biomarkers of PAH exposure. Here, we compare levels of particulate polycyclic aromatic compounds (P-PACs, a group of aromatic hydrocarbons containing PAHs and heterocyclic compounds with four or more rings) in air and dermal patch samples from 20 road pavers to the corresponding urinary levels of naphthalene (U-Nap) (two rings), phenanthrene (U-Phe) (three rings), monohydroxylated metabolites of naphthalene (OH-Nap) and phenanthrene (OH-Phe), and 1-hydroxypyrene (OH-Pyr) (four rings), the most widely used biomarker of PAH exposure. For each worker, daily breathing-zone air (n = 55) and dermal patch samples (n = 56) were collected on three consecutive workdays along with postshift, bedtime, and morning urine samples (n = 149). Measured levels of P-PACs and the urinary analytes were used to statistically model exposure–biomarker relationships while controlling for urinary creatinine, smoking status, age, body mass index, and the timing of urine sampling. Levels of OH-Phe in urine collected postshift, at bedtime, and the following morning were all significantly associated with levels of P-PACs in air and dermal patch samples. For U-Nap, U-Phe, and OH-Pyr, both air and dermal patch measurements of P-PACs were significant predictors of postshift urine levels, and dermal patch measurements were significant predictors of bedtime urine levels (all three analytes) and morning urine levels (U-Nap and OH-Pyr only). Significant effects of creatinine concentration were observed for all analytes, and modest effects of smoking status and body mass index were observed for U-Phe and OH-Pyr, respectively. Levels of OH-Nap were not associated with P-PAC measurements in air or dermal patch samples but were significantly affected by smoking status, age, day of sample collection, and urinary creatinine. We conclude that U-Nap, U-Phe, OH-Phe, and OH-Pyr can be used as biomarkers of exposure to particulate asphalt emissions, with OH-Phe being the most promising candidate. Indications that levels of U-Nap, U-Phe, and OH-Pyr were significantly associated with dermal patch measurements well into the evening after a given work shift, combined with the small ratios of within-person variance components to between-person variance components at bedtime, suggest that bedtime measurements may be useful for investigating dermal PAH exposures. PMID:19602502

  3. Different Pearl Indices in studies of hormonal contraceptives in the United States: Impact of study population

    PubMed Central

    Gerlinger, Christoph; Trussell, James; Mellinger, Uwe; Merz, Martin; Marr, Joachim; Bannemerschult, Ralf; Schellschmidt, Ilka; Endrikat, Jan

    2014-01-01

    Objective To examine the impact of subject characteristics on efficacy as measured by the Pearl Index (PI) in clinical trials and to make study populations similar by matching. Methods Our analysis used US data from four large Phase III studies. We compared results from one fertility control patch study with pooled data from three studies with virtually identical design on oral hormonal contraceptives. First, we identified three characteristics that had the most impact on the PI. Second, we used these three variables and matched subjects from the patch study with those from the OC studies. Finally, we calculated the PIs for matched and unmatched subjects from both the patch study and the OC studies. Results A total of 3,706 subjects were included in our analysis. The variables ‘Hispanic ethnicity’, ‘previous pregnancy’ and ‘previous use of hormonal contraceptives’ had the most impact on the PI. The PIs for the matched patch cohort and the matched OC cohort were 2.97 and 2.48, respectively. Those for the unmatched patch cohort and the unmatched OC cohort were 10.17 and 0.90, respectively. Conclusion Subject characteristics strongly influence the PI in clinical studies of hormonal contraceptives. In particular, Hispanic ethnicity, previous pregnancies and no previous use of hormonal contraceptives result in a higher PI. Implications PIs from different clinical trials cannot be meaningfully compared unless subject characteristics that have most impact on the PI are similar, or are made to be similar statistically as we did here by matching. PMID:24813941

  4. [Spatiotemporal variation of typical red soil eroded landscape pattern: a case study in Changting County of Fujian Province].

    PubMed

    Wu, Guo-sheng; Lin, Hui-hua; Zhu, He-jian; Sha, Jin-ming; Dai, Wen-yuan

    2011-07-01

    Based on the 1988, 2000, and 2007 remote sensing images of a typical red soil eroded region (Changting County, Fujian Province) and the digital elevation model (DEM), the eroded landscape types were worked out, and the changes of the eroded landscape pattern in the region from 1988 to 2007 were analyzed with the spatial mathematics model. In 1988-2007, different eroded landscape types in the region had the characteristics of inter-transfer, mainly manifested in the transfer from seriously eroded to lightly eroded types but still existed small amount of the transference from lightly eroded to seriously eroded types. Little change was observed in the controid of the eroded landscape. In the County, Hetian Town was all along the eroded center. During the study period, the landscape pattern index showed a tendency of low heterogeneity, low fragmentation, and high regularization at landscape level, but an overall improvement and expansion of lightly eroded and easy-to-tackle patches as well as the partial improvement and fragmentation of seriously eroded and difficult-to-tackle patches at patch level.

  5. [Relationships of wetland landscape fragmentation with climate change in middle reaches of Heihe River, China].

    PubMed

    Jiang, Peng-Hui; Zhao, Rui-Feng; Zhao, Hai-Li; Lu, Li-Peng; Xie, Zuo-Lun

    2013-06-01

    Based on the 1975-2010 multi-temporal remotely sensed TM and ETM images and meteorological data, in combining with wavelet analysis, trend surface simulation, and interpolation method, this paper analyzed the meteorological elements' spatial distribution and change characteristics in the middle reaches of Heihe River, and elucidated the process of wetland landscape fragmentation in the study area by using the landscape indices patch density (PD), mean patch size (MPS), and patch shape fragment index (FS). The relationships between the wetland landscape fragmentation and climate change were also approached through correlation analysis and multiple stepwise regression analysis. In 1975-2010, the overall distribution patterns of precipitation and temperature in the study area were low precipitation in high temperature regions and high precipitation in low temperature regions, and the main characteristics of climate change were the conversion from dry to wet and from cold to warm. In the whole study period, the wetland landscape fragmentation was mainly manifested in the decrease of MPS, with a decrement of 48.95 hm2, and the increase of PD, with an increment of 0.006 ind x hm(-2).

  6. Weighted optimization of irradiance for photodynamic therapy of port wine stains

    NASA Astrophysics Data System (ADS)

    He, Linhuan; Zhou, Ya; Hu, Xiaoming

    2016-10-01

    Planning of irradiance distribution (PID) is one of the foremost factors for on-demand treatment of port wine stains (PWS) with photodynamic therapy (PDT). A weighted optimization method for PID was proposed according to the grading of PWS with a three dimensional digital illumination instrument. Firstly, the point clouds of lesions were filtered to remove the error or redundant points, the triangulation was carried out and the lesion was divided into small triangular patches. Secondly, the parameters such as area, normal vector and orthocenter for optimization of each triangular patch were calculated, and the weighted coefficients were determined by the erythema indexes and areas of patches. Then, the optimization initial point was calculated based on the normal vectors and orthocenters to optimize the light direction. In the end, the irradiation can be optimized according to cosine values of irradiance angles and weighted coefficients. Comparing the irradiance distribution before and after optimization, the proposed weighted optimization method can make the irradiance distribution match better with the characteristics of lesions, and has the potential to improve the therapeutic efficacy.

  7. Replicated landscape genetic and network analyses reveal wide variation in functional connectivity for American pikas.

    PubMed

    Castillo, Jessica A; Epps, Clinton W; Jeffress, Mackenzie R; Ray, Chris; Rodhouse, Thomas J; Schwalm, Donelle

    2016-09-01

    Landscape connectivity is essential for maintaining viable populations, particularly for species restricted to fragmented habitats or naturally arrayed in metapopulations and facing rapid climate change. The importance of assessing both structural connectivity (physical distribution of favorable habitat patches) and functional connectivity (how species move among habitat patches) for managing such species is well understood. However, the degree to which functional connectivity for a species varies among landscapes, and the resulting implications for conservation, have rarely been assessed. We used a landscape genetics approach to evaluate resistance to gene flow and, thus, to determine how landscape and climate-related variables influence gene flow for American pikas (Ochotona princeps) in eight federally managed sites in the western United States. We used empirically derived, individual-based landscape resistance models in conjunction with predictive occupancy models to generate patch-based network models describing functional landscape connectivity. Metareplication across landscapes enabled identification of limiting factors for dispersal that would not otherwise have been apparent. Despite the cool microclimates characteristic of pika habitat, south-facing aspects consistently represented higher resistance to movement, supporting the previous hypothesis that exposure to relatively high temperatures may limit dispersal in American pikas. We found that other barriers to dispersal included areas with a high degree of topographic relief, such as cliffs and ravines, as well as streams and distances greater than 1-4 km depending on the site. Using the empirically derived network models of habitat patch connectivity, we identified habitat patches that were likely disproportionately important for maintaining functional connectivity, areas in which habitat appeared fragmented, and locations that could be targeted for management actions to improve functional connectivity. We concluded that climate change, besides influencing patch occupancy as predicted by other studies, may alter landscape resistance for pikas, thereby influencing functional connectivity through multiple pathways simultaneously. Spatial autocorrelation among genotypes varied across study sites and was largest where habitat was most dispersed, suggesting that dispersal distances increased with habitat fragmentation, up to a point. This study demonstrates how landscape features linked to climate can affect functional connectivity for species with naturally fragmented distributions, and reinforces the importance of replicating studies across landscapes. © 2016 by the Ecological Society of America.

  8. Low-flow characteristics of streams in the Puget Sound region, Washington

    USGS Publications Warehouse

    Hidaka, F.T.

    1973-01-01

    Periods of low streamflow are usually the most critical factor in relation to most water uses. The purpose of this report is to present data on low-flow characteristics of streams in the Puget Sound region, Washington, and to briefly explain some of the factors that influence low flow in the various basins. Presented are data on low-flow frequencies of streams in the Puget Sound region, as gathered at 150 gaging stations. Four indexes were computed from the flow-flow-frequency curves and were used as a basis to compare the low-flow characteristics of the streams. The indexes are the (1) low-flow-yield index, expressed in unit runoff per square mile; (2) base-flow index, or the ratio of the median 7-day low flow to the average discharge; (3) slope index, or slope of annual 7-day low-flow-frequency curve; and (4) spacing index, or spread between the 7-day and 183-day low-flow-frequency curves. The indexes showed a wide variation between streams due to the complex interrelation between climate, topography, and geology. The largest low-flow-yield indexes determined--greater than 1.5 cfs (cubic feet per second) per square mile--were for streams that head at high altitudes in the Cascade and Olympic Mountains and have their sources at glaciers. The smallest low-flow-yield indexes--less than 0.5 cfs per square mile--were for the small streams that drain the lowlands adjacent to Puget Sound. Indexes between the two extremes were for nonglacial streams that head at fairly high altitudes in areas of abundant precipitation. The base-flow index has variations that can be attributed to a basin's hydrogeology, with very little influence from climate. The largest base-flow indexes were obtained for streams draining permeable unconsolidated glacial and alluvial sediments in parts of the lowlands adjacent to Puget Sound. Large volume of ground water in these materials sustain flows during late summer. The smallest indexes were computed for streams draining areas underlain by relatively impermeable igneous, sedimentary, and metamorphic rocks or by relatively impermeable glacial till. Melt water from snow and ice influences the index for streams which originate at glaciers, and result in fairly large indexes--0.25 or greater. The slope index is influenced principally by the character of the geologic materials that underlie the basin. The largest slope indexes were computed for small streams that drain areas underlain by compact glacial till or consolidated sedimentary rocks. In contrast, lowland streams that flow through areas underlain by unconsolidated alluvia and glacial deposits have the smallest indexes. Small slope indexes also are characteristic of glacial streams and show the moderating effect of the snow and ice storage in the high mountain basins. The spacing indexes are similar to the slope indexes in that they are affected by the character of the geologic materials underlying a basin. The largest spacing indexes are characteristic of small streams whose basins are underlain by glacial till or by consolidated sedimentary rocks. The smallest indexes were computed for some lowland streams draining areas underlain by permeable glacial and alluvial sediments. The indexes do not appear to have a definite relation to each other. The low-flow-yield indexes are not related to either the slope or spacing indexes because snow and ice storage has a great influence on the low-flow-yield index, while the character of the geologic materials influences the slope and spacing indexes. A relation exists between the slope and spacing indexes but many anomalies occur that cannot be explained by the geology of the basins.

  9. Sprawl in European urban areas

    NASA Astrophysics Data System (ADS)

    Prastacos, Poulicos; Lagarias, Apostolos

    2016-08-01

    In this paper the 2006 edition of the Urban Atlas database is used to tabulate areas of low development density, usually referred to as "sprawl", for many European cities. The Urban Atlas database contains information on the land use distribution in the 305 largest European cities. Twenty different land use types are recognized, with six of them representing urban fabric. Urban fabric classes are residential areas differentiated by the density of development, which is measured by the sealing degree parameter that ranges from 0% to 100% (non-developed, fully developed). Analysis is performed on the distribution of the middle to low density areas defined as those with sealing degree less than 50%. Seven different country groups in which urban areas have similar sprawl characteristics are identified and some key characteristics of sprawl are discussed. Population of an urban area is another parameter considered in the analysis. Two spatial metrics, average patch size and mean distance to the nearest neighboring patch of the same class, are used to describe proximity/separation characteristics of sprawl in the urban areas of the seven groups.

  10. Population pharmacokinetic model of transdermal nicotine delivered from a matrix-type patch.

    PubMed

    Linakis, Matthew W; Rower, Joseph E; Roberts, Jessica K; Miller, Eleanor I; Wilkins, Diana G; Sherwin, Catherine M T

    2017-12-01

    Nicotine addiction is an issue faced by millions of individuals worldwide. As a result, nicotine replacement therapies, such as transdermal nicotine patches, have become widely distributed and used. While the pharmacokinetics of transdermal nicotine have been extensively described using noncompartmental methods, there are few data available describing the between-subject variability in transdermal nicotine pharmacokinetics. The aim of this investigation was to use population pharmacokinetic techniques to describe this variability, particularly as it pertains to the absorption of nicotine from the transdermal patch. A population pharmacokinetic parent-metabolite model was developed using plasma concentrations from 25 participants treated with transdermal nicotine. Covariates tested in this model included: body weight, body mass index, body surface area (calculated using the Mosteller equation) and sex. Nicotine pharmacokinetics were best described with a one-compartment model with absorption based on a Weibull distribution and first-order elimination and a single compartment for the major metabolite, cotinine. Body weight was a significant covariate on apparent volume of distribution of nicotine (exponential scaling factor 1.42). After the inclusion of body weight in the model, no other covariates were significant. This is the first population pharmacokinetic model to describe the absorption and disposition of transdermal nicotine and its metabolism to cotinine and the pharmacokinetic variability between individuals who were administered the patch. © 2017 The British Pharmacological Society.

  11. Global Assessment of Groundwater Sustainability Based On Storage Anomalies

    NASA Astrophysics Data System (ADS)

    Thomas, Brian F.; Caineta, Júlio; Nanteza, Jamiat

    2017-11-01

    The world's largest aquifers are a fundamental source of freshwater used for agricultural irrigation and to meet human water needs. Therefore, their stored volume of groundwater is linked with water security, which becomes more relevant during periods of drought. This work focuses on understanding large-scale groundwater changes, where we introduce an approach to evaluate groundwater sustainability at a global scale. We employ a groundwater drought index to assess performance metrics (reliability, resilience, vulnerability, and a combined sustainability index) for the largest and most productive global aquifers. Spatiotemporal changes in total water storage are derived from remote sensing observations of gravity anomalies, from which the groundwater drought index is inferred. The results reveal a complex relationship between the indicators, while considering monthly variability in groundwater storage. Combining the drought and sustainability indexes, as presented in this work, constitutes a measure for quantifying groundwater sustainability. This framework integrates changes in groundwater resources due to human influences and climate changes, thus opening a path to assess progress toward sustainable use and water security.

  12. Superhump and outburst activity of the cataclysmic variable RZ LMi in the U- and optical passbands

    NASA Astrophysics Data System (ADS)

    Shugarov, S. Y.; Katysheva, N. A.; Chochol, D.; Krushevska, V. N.; Vozyakova, O. V.

    2018-05-01

    An analysis of the new U,B,V,RC,IC-photometry of the cataclysmic variable RZ LMi obtained in 2016-17 showed the largest (U-B) colour excess in quiescence as well as during the decline of brightness, associated with the outbursts activity. The smallest (U-B) colour excess was found during the brightness increase from the quiescence. In contrast to the (U-B) colour index, the (B-V),(V-RC),(RC-IC) colour indices exhibits the largest colour excesses near the maximum of the outburst and the smallest during the quiescence. The (B-V) colour index showed also a large excess 1-2 days before a minimum. The detailed study of superhumps during the maximum of activity reveals the largest (U-B) colour excess at the time of the minimum brightness of superhumps. The (B-RC) colour index exhibits a similar behaviour, but with a phase shift of +0.1-{+}0.2 period of superhumps. The tracks in two-colour and colour-magnitude diagrams during superoutbursts are compared with the data for other cataclysmic variables during their outbursts as well as with published theoretical calculations.

  13. Ranking habitat for Marbled Murrelets: New conservation approach for species with uncertain detection

    Treesearch

    Howard B. Stauffer; C. John Ralph; Sherri L. Miller

    2004-01-01

    An essential element in the conservation of rare species is the ranking of some aspects of habitat quality. We developed a method to rank the importance of individual habitat patches to Marbled Murrelets (Brachyramphus marmoratus) in 26 old-growth forest stands in northern California, using estimates of stand occupaqcy as an index of nesting activity...

  14. Spatial distribution of the dagger nematode Xiphinema index and its associated Grapevine fanleaf virus in French vineyard.

    PubMed

    Villate, L; Fievet, V; Hanse, B; Delemarre, F; Plantard, O; Esmenjaud, D; van Helden, M

    2008-08-01

    The nematode Xiphinema index is, economically, the major virus vector in viticulture, transmitting specifically the Grapevine fanleaf virus (GFLV), the most severe grapevine virus disease worldwide. Increased knowledge of the spatial distribution of this nematode, both horizontally and vertically, and of correlative GFLV plant infections, is essential to efficiently control the disease. In two infested blocks of the Bordeaux vineyard, vertical distribution data showed that the highest numbers of individuals occurred at 40 to 110 cm depth, corresponding to the two layers where the highest densities of fine roots were observed. Horizontal distribution based on a 10 x 15 m grid sampling procedure revealed a significant aggregative pattern but no significant neighborhood structure of nematode densities. At a finer scale ( approximately 2 x 2 m), nematode sampling performed in a third block confirmed a significant aggregative pattern, with patches of 6 to 8 m diameter, together with a significant neighborhood structure of nematode densities, thus identifying the relevant sampling scale to describe the nematode distribution. Nematode patches correlate significantly with those of GFLV-infected grapevine plants. Finally, nematode and virus spread were shown to extend preferentially parallel to vine rows, probably due to tillage during mechanical weeding.

  15. Prediction of surface distress using neural networks

    NASA Astrophysics Data System (ADS)

    Hamdi, Hadiwardoyo, Sigit P.; Correia, A. Gomes; Pereira, Paulo; Cortez, Paulo

    2017-06-01

    Road infrastructures contribute to a healthy economy throughout a sustainable distribution of goods and services. A road network requires appropriately programmed maintenance treatments in order to keep roads assets in good condition, providing maximum safety for road users under a cost-effective approach. Surface Distress is the key element to identify road condition and may be generated by many different factors. In this paper, a new approach is aimed to predict Surface Distress Index (SDI) values following a data-driven approach. Later this model will be accordingly applied by using data obtained from the Integrated Road Management System (IRMS) database. Artificial Neural Networks (ANNs) are used to predict SDI index using input variables related to the surface of distress, i.e., crack area and width, pothole, rutting, patching and depression. The achieved results show that ANN is able to predict SDI with high correlation factor (R2 = 0.996%). Moreover, a sensitivity analysis was applied to the ANN model, revealing the influence of the most relevant input parameters for SDI prediction, namely rutting (59.8%), crack width (29.9%) and crack area (5.0%), patching (3.0%), pothole (1.7%) and depression (0.3%).

  16. Comparison of the cumulative irritation potential of adapalene gel and cream with that of erythromycin/tretinoin solution and gel and erythromycin/isotretinoin gel.

    PubMed

    Queille-Roussel, C; Poncet, M; Mesaros, S; Clucas, A; Baker, M; Soloff, A M

    2001-02-01

    Adapalene is a naphthoic acid derivative with retinoid activity that is effective in the treatment of mild to moderate acne vulgaris. This study assessed the cumulative irritation potential of adapalene gel (0.1%) and adapalene cream (0.1%) compared with that of erythromycin (4%)/tretinoin (0.025%) solution, erythromycin (4%)/tretinoin (0.025%) gel, erythromycin (2%)/isotretinoin (0.05%) gel, and white petrolatum (negative control). This was a single-center, randomized, controlled, investigator-blinded, intraindividual comparison study in healthy subjects with normal skin. The cumulative irritation assay (patch test) was used to assess the potential for irritation (including erythema) of the treatments. Each subject received all study treatments, randomly applied under occlusion (patch), to sites on either side of the midline on the mid-thoracic area of the back. All patches were applied to the same sites throughout the study, unless the degree of reaction to the treatment or adhesive necessitated removal. For 3 weeks, each test material was applied daily, Monday through Friday, for approximately 24 hours; the Friday patches were left in place over the weekend for approximately 72 hours. All 36 subjects (26 men, 10 women; age, 18-49 years [mean, 30 years]) completed the study. In the course of the study, all subjects had > or =1 application discontinued prematurely on > or =1 site due to intolerance. There were no discontinuations with white petrolatum. All erythromycin/tretinoin gel patches were discontinued at day 10; 35 of 36 erythromycin/isotretinoin gel patches were discontinued at day 9; and 35 of 36 erythromycin/tretinoin solution patches were discontinued at day 11 or day 17. The adapalene products, although slightly more irritating (mean cumulative irritation index, 0.25-1) than white petrolatum, were significantly less irritating than the erythromycin/tretinoin and erythromycin/isotretinoin products (P < 0.01). Adapalene gel and cream were well tolerated, with possible benefits for compliance. Their low irritation potential should be considered when prescribing a topical retinoid for the treatment of acne vulgaris.

  17. Allergic contact dermatitis pattern in Kuwait: nickel leads the pack. In-depth analysis of nickel allergy based on the results from a large prospective patch test series report

    PubMed Central

    Almutawa, Fahad

    2017-01-01

    Introduction Contact dermatitis is a relatively common dermatosis reported among several population groups from all around the globe. However, the data from Kuwait is unavailable. Patch tests are essential for the diagnosis of contact sensitization. Aim To determine a relative frequency and pattern of sensitizers to different allergens in patients of suspected contact dermatitis in Kuwait and, also to study the role of the commonest sensitizer in detail. Material and methods Patch tests were performed in 2461 consecutive patients with a clinical diagnosis of contact dermatitis seen at our hospital between September 1, 2014 and August 31, 2015. Out of the total of 1381 (56.1%) patients with positive patch test results to at least one allergen, 546 (22.2%) patients with a single positive reaction to nickel only (single largest sensitizer) were selected as the study population for further detailed analysis. Results At least one positive patch test reaction was found in 1381 (56.12%) patients. Nickel was found to be the most common sensitizer seen in 546 (40%) patients. The mean age was 37.3 ±13.8 years and the mean duration of disease was 27.3 ±13.8 months. Most (387/546) patients sensitized were females. The forearms/hands and wrists were the most prevalent sites (52.56% of the participants). In 58.91% of women, dermatitis was more often confined to other sites, mostly ears and the neck due to earrings and necklaces. Just more than half of the number (51.09%) of nickel allergic patients were found in the age group of 15–25 years. Hairdressers/beauticians were the most affected group followed by house workers (housewives, cleaners, housekeepers). Conclusions Nickel is the single most common sensitizer found in our patients, and female sex, young age, occupation with long hours of contact to nickel are high risk factors. We recommend that a directive, which limits the release of nickel from products with extended skin contact, be approved in Kuwait. PMID:28670248

  18. Fire history and fire-climate relationships in upper elevation forests of the southwestern United States

    NASA Astrophysics Data System (ADS)

    Margolis, Ellis Quinn

    Fire history and fire-climate relationships of upper elevation forests of the southwestern United States are imperative for informing management decisions in the face of increased crown fire occurrence and climate change. I used dendroecological techniques to reconstruct fires and stand-replacing fire patch size in the Madrean Sky Islands and Mogollon Plateau. Reconstructed patch size (1685-1904) was compared with contemporary patch size (1996-2004). Reconstructed fires at three sites had stand-replacing patches totaling > 500 ha. No historical stand-replacing fire patches were evident in the mixed conifer/aspen forests of the Sky Islands. Maximum stand-replacing fire patch size of modern fires (1129 ha) was greater than that reconstructed from aspen (286 ha) and spruce-fir (521 ha). Undated spruce-fir patches may be evidence of larger (>2000ha) stand-replacing fire patches. To provide climatological context for fire history I used correlation and regionalization analyses to document spatial and temporal variability in climate regions, and El-Nino Southern Oscillation (ENSO), the Pacific Decadal Oscillation (PDO) and the Atlantic Multi-decadal Oscillation (AMO) teleconnections using 273 tree-ring chronologies (1732-1979). Four regions were determined by common variability in annual ring width. The component score time series replicate spatial variability in 20th century droughts (e.g., 1950's) and pluvials (e.g., 1910's). Two regions were significantly correlated with instrumental SOI and AMO, and three with PDO. Sub-regions within the southwestern U.S. varied geographically between the instrumental (1900-1979) and the pre-instrumental periods (1732-1899). Mapped correlations between ENSO, PDO and AMO, and tree-ring indices illustrate detailed sub-regional variability in the teleconnections. I analyzed climate teleconnections, and fire-climate relationships of historical upper elevation fires from 16 sites in 8 mountain ranges. I tested for links between Palmer Drought Severity Index and tree-ring reconstructed ENSO, PDO and AMO phases (1905-1978 and 1700-1904). Upper elevation fires (115 fires, 84 fire years, 1623-1904) were compared with climate indices. ENSO, PDO, and AMO affected regional PDSI, but AMO and PDO teleconnections changed between periods. Fire occurrence was significantly related to inter-annual variability in PDSI, precipitation, ENSO, and phase combinations of ENSO and PDO, but not AMO (1700-1904). Reduced upper elevation fire (1785-1840) was coincident with a cool AMO phase.

  19. How landscape scale changes affect ecological processes in conservation areas: external factors influence land use by zebra (Equus burchelli) in the Okavango Delta.

    PubMed

    Bartlam-Brooks, Hattie L A; Bonyongo, Mpaphi C; Harris, Stephen

    2013-09-01

    Most large-bodied wildlife populations in sub-Saharan Africa only survive in conservation areas, but are continuing to decline because external changes influence ecological processes within reserves, leading to a lack of functionality. However, failure to understand how landscape scale changes influence ecological processes limits our ability to manage protected areas. We used GPS movement data to calculate dry season home ranges for 14 zebra mares in the Okavango Delta and investigated the effects of a range of landscape characteristics (number of habitat patches, mean patch shape, mean index of juxtaposition, and interspersion) on home range size. Resource utilization functions (RUF) were calculated to investigate how specific landscape characteristics affected space use. Space use by all zebra was clustered. In the wetter (Central) parts of the Delta home range size was negatively correlated with the density of habitat patches, more complex patch shapes, low juxtaposition of habitats and an increased availability of floodplain and grassland habitats. In the drier (Peripheral) parts of the Delta, higher use by zebra was also associated with a greater availability of floodplain and grassland habitats, but a lower density of patches and simpler patch shapes. The most important landscape characteristic was not consistent between zebra within the same area of the Delta, suggesting that no single foraging strategy is substantially superior to others, and so animals using different foraging strategies may all thrive. The distribution and complexity of habitat patches are crucial in determining space use by zebra. The extent and duration of seasonal flooding is the principal process affecting habitat patch characteristics in the Okavango Delta, particularly the availability of floodplains, which are the habitat at greatest risk from climate change and anthropogenic disturbance to the Okavango's catchment basin. Understanding how the factors that determine habitat complexity may change in the future is critical to the conservation of large mammal populations. Our study shows the importance of maintaining flood levels in the Okavango Delta and how the loss of seasonal floodplains will be compounded by changes in habitat configuration, forcing zebra to change their relative space use and enlarge home ranges, leading to increased competition for key resources and population declines.

  20. Patch-based iterative conditional geostatistical simulation using graph cuts

    NASA Astrophysics Data System (ADS)

    Li, Xue; Mariethoz, Gregoire; Lu, DeTang; Linde, Niklas

    2016-08-01

    Training image-based geostatistical methods are increasingly popular in groundwater hydrology even if existing algorithms present limitations that often make real-world applications difficult. These limitations include a computational cost that can be prohibitive for high-resolution 3-D applications, the presence of visual artifacts in the model realizations, and a low variability between model realizations due to the limited pool of patterns available in a finite-size training image. In this paper, we address these issues by proposing an iterative patch-based algorithm which adapts a graph cuts methodology that is widely used in computer graphics. Our adapted graph cuts method optimally cuts patches of pixel values borrowed from the training image and assembles them successively, each time accounting for the information of previously stitched patches. The initial simulation result might display artifacts, which are identified as regions of high cost. These artifacts are reduced by iteratively placing new patches in high-cost regions. In contrast to most patch-based algorithms, the proposed scheme can also efficiently address point conditioning. An advantage of the method is that the cut process results in the creation of new patterns that are not present in the training image, thereby increasing pattern variability. To quantify this effect, a new measure of variability is developed, the merging index, quantifies the pattern variability in the realizations with respect to the training image. A series of sensitivity analyses demonstrates the stability of the proposed graph cuts approach, which produces satisfying simulations for a wide range of parameters values. Applications to 2-D and 3-D cases are compared to state-of-the-art multiple-point methods. The results show that the proposed approach obtains significant speedups and increases variability between realizations. Connectivity functions applied to 2-D models transport simulations in 3-D models are used to demonstrate that pattern continuity is preserved.

  1. Nesting ecology of Whimbrels in boreal Alaska

    USGS Publications Warehouse

    Harwood, Christopher M.; Gill, Robert E.; Powell, Abby

    2016-01-01

    Breeding ecology studies of boreal waders have been relatively scarce in North America. This paucity is due in part to boreal habitats being difficult to access, and boreal waders being widely dispersed and thus difficult to monitor. Between 2008 and 2014 we studied the nesting ecology of Whimbrels Numenius phaeopus hudsonicus in interior Alaska, a region characterized by an active wildfire regime. Our objectives were to (1) describe the nesting ecology of Whimbrels in tundra patches within the boreal forest, (2) assess the influence of habitat features at multiple scales on nest-site selection, and (3) characterize factors affecting nest survival. Whimbrels nested in the largest patches and exhibited a consistently compressed annual breeding schedule. We hypothesized that these Whimbrels would exhibit synchronous and clustered nesting, but observed synchronous nesting in only 2009 and 2011, and evidence of clustered nesting at just one study area in 2009, providing limited support for the hypothesis. Nests tended to be on hummocks and exhibited lateral concealment around the bowl, suggesting a trade-off between a greater view from the nest and concealment. However, our analysis failed to identify other important habitat features at scales from 1–400 m from the nest. Our best-supported nest survival model showed a strong difference between our two main study areas, but this difference remains largely unexplained. Given the increased frequency, severity, and extent of wildfires predicted under climate change scenarios, our study highlights the importance of monitoring the persistence of boreal tundra patches and the Whimbrels breeding therein.

  2. Folliculitis decalvans: a multicentre review of 82 patients.

    PubMed

    Vañó-Galván, S; Molina-Ruiz, A M; Fernández-Crehuet, P; Rodrigues-Barata, A R; Arias-Santiago, S; Serrano-Falcón, C; Martorell-Calatayud, A; Barco, D; Pérez, B; Serrano, S; Requena, L; Grimalt, R; Paoli, J; Jaén, P; Camacho, F M

    2015-09-01

    Folliculitis decalvans (FD) is a rare neutrophilic scarring alopecia that represents a therapeutic challenge for dermatologists. To describe the epidemiology, comorbidities, clinical presentation, diagnostic findings and therapeutic options in a large series of patients with FD. This retrospective multicentre review includes patients diagnosed with FD based on clinical and histopathologic findings. The clinical severity was determined by the maximum diameter of the largest alopecic patch (slight: <2 cm, moderate: 2-4.99 cm, severe: 5 cm or more). Response to therapy was assessed as improvement, worsening or stabilization depending on the clinical symptoms (pruritus and trichodynia), inflammatory signs (erythema, pustules and crusts) and the extension of the alopecic patch. Overall, 82 patients (52 males and 30 females) with a mean age of 35 years were included. No significant comorbidities were present. A family history was present in three males. Severe FD was observed in 17 patients (21%). The independent factors associated with severe FD after multivariate analysis were: onset of FD before 25 years of age and presence of pustules. Oral antibiotics (tetracyclines and the combination of clindamycin and rifampicin) improved 90% and 100% of the patients, with a mean duration of response of 4.6 and 7.2 months respectively. The onset of FD before 25 years of age and the presence of pustules within the alopecic patch were associated with severe FD. Tetracyclines and the combination of clindamycin and rifampicin were the most useful treatments. © 2015 European Academy of Dermatology and Venereology.

  3. Intelligent Patching of Conceptual Geometry for CFD Analysis

    NASA Technical Reports Server (NTRS)

    Li, Wu

    2010-01-01

    The iPatch computer code for intelligently patching surface grids was developed to convert conceptual geometry to computational fluid dynamics (CFD) geometry (see figure). It automatically uses bicubic B-splines to extrapolate (if necessary) each surface in a conceptual geometry so that all the independently defined geometric components (such as wing and fuselage) can be intersected to form a watertight CFD geometry. The software also computes the intersection curves of surface patches at any resolution (up to 10.4 accuracy) specified by the user, and it writes the B-spline surface patches, and the corresponding boundary points, for the watertight CFD geometry in the format that can be directly used by the grid generation tool VGRID. iPatch requires that input geometry be in PLOT3D format where each component surface is defined by a rectangular grid {(x(i,j), y(i,j), z(i,j)):1less than or equal to i less than or equal to m, 1 less than or equal to j less than or equal to n} that represents a smooth B-spline surface. All surfaces in the PLOT3D file conceptually represent a watertight geometry of components of an aircraft on the half-space y greater than or equal to 0. Overlapping surfaces are not allowed, but could be fixed by a utility code "fixp3d". The fixp3d utility code first finds the two grid lines on the two surface grids that are closest to each other in Hausdorff distance (a metric to measure the discrepancies of two sets); then uses one of the grid lines as the transition line, extending grid lines on one grid to the other grid to form a merged grid. Any two connecting surfaces shall have a "visually" common boundary curve, or can be described by an intersection relationship defined in a geometry specification file. The intersection of two surfaces can be at a conceptual level. However, the intersection is directional (along either i or j index direction), and each intersecting grid line (or its spine extrapolation) on the first surface should intersect the second surface. No two intersection relationships will result in a common intersection point of three surfaces. The output files of iPatch are IGES, d3m, and mapbc files that define the CFD geometry in VGRID format. The IGES file gives the NURBS definition of the outer mold line in the geometry. The d3m file defines how the outer mold line is broken into surface patches whose boundary curves are defined by points. The mapbc file specifies what the boundary condition is on each patch and the corresponding NURBS surface definition of each non-planar patch in the IGES file.

  4. The effect of second-stage pushing and body mass index on postdural puncture headache.

    PubMed

    Franz, Amber M; Jia, Shawn Y; Bahnson, Henry T; Goel, Akash; Habib, Ashraf S

    2017-02-01

    To explore how pushing during labor and body mass index affect the development of postdural puncture headache in parturients who experienced dural puncture with Tuohy needles. Retrospective cohort. Obstetric ward and operating rooms at a university-affiliated hospital. One hundred ninety parturients who had witnessed dural puncture with 17 or 18 gauge Tuohy needles from 1999-2014. Patients were categorized by pushing status and body mass index (kg/m 2 ): nonobese <30, obese 30-39.99, morbidly obese 40-49.99, and super obese ≥50. Headache, number of days of headache, maximum headache score, and epidural blood patch placement. Compared with women who did not push, women who pushed during labor had increased risk of postdural puncture headache (odds ratio [OR], 2.1 [1.1-4.0]; P=.02), more days of headache (P=.02), and increased epidural blood patch placement (P=.02). Super obese patients were less likely to develop headache compared with nonobese (OR, 0.33 [0.13-0.85]; P=.02), obese (OR, 0.37 [0.14-0.98]; P=.045], and morbidly obese patients (OR, 0.20 [0.05-0.68]; P<.01). In a multivariate logistic regression model, lack of pushing (OR, 0.57 [0.29-1.10]; P=.096) and super obesity (OR, 0.41 [0.16-1.02]; P=.056] were no longer significantly associated with reduced risk of postdural puncture headache. Parturients who did not push before delivery and parturients with body mass index ≥50kg/m 2 were less likely to develop postdural puncture headache in a univariate analysis. Similar trends were demonstrated in a multivariate model, but were no longer statistically significant. Copyright © 2016 Elsevier Inc. All rights reserved.

  5. TOPICAL REVIEW: Smart aggregates: multi-functional sensors for concrete structures—a tutorial and a review

    NASA Astrophysics Data System (ADS)

    Song, Gangbing; Gu, Haichang; Mo, Yi-Lung

    2008-06-01

    This paper summarizes the authors' recent pioneering research work in piezoceramic-based smart aggregates and their innovative applications in concrete civil structures. The basic operating principle of smart aggregates is first introduced. The proposed smart aggregate is formed by embedding a waterproof piezoelectric patch with lead wires into a small concrete block. The proposed smart aggregates are multi-functional and can perform three major tasks: early-age concrete strength monitoring, impact detection and structural health monitoring. The proposed smart aggregates are embedded into the desired location before the casting of the concrete structure. The concrete strength development is monitored by observing the high frequency harmonic wave response of the smart aggregate. Impact on the concrete structure is detected by observing the open-circuit voltage of the piezoceramic patch in the smart aggregate. For structural health monitoring purposes, a smart aggregate-based active sensing system is designed for the concrete structure. Wavelet packet analysis is used as a signal-processing tool to analyze the sensor signal. A damage index based on the wavelet packet analysis is used to determine the structural health status. To better describe the time-history and location information of damage, two types of damage index matrices are proposed: a sensor-history damage index matrix and an actuator-sensor damage index matrix. To demonstrate the multi-functionality of the proposed smart aggregates, different types of concrete structures have been used as test objects, including concrete bridge bent-caps, concrete cylinders and a concrete frame. Experimental results have verified the effectiveness and the multi-functionality of the proposed smart aggregates. The multi-functional smart aggregates have the potential to be applied to the comprehensive monitoring of concrete structures from their earliest stages and throughout their lifetime.

  6. Differential Efficacy of Nicotine Replacement Among Overweight and Obese Women Smokers.

    PubMed

    Strong, David R; David, Sean P; Johnstone, Elaine C; Aveyard, Paul; Murphy, Michael F; Munafò, Marcus R

    2015-07-01

    Rates of obesity are higher among more dependent smokers and 37%-65% of smokers seeking cessation treatment are overweight or obese. Overweight or obese smokers may possess metabolic and neurobiological features that contribute to difficulty achieving cessation using front-line nicotine replacement products. Attention to factors that facilitate effective cessation treatment in this vulnerable population is needed to significantly reduce mortality risk among overweight and obese smokers. This secondary analysis of 2 large trials of transdermal nicotine replacement in general medical practices evaluated the hypothesis that higher body mass index (BMI) would moderate the efficacy of the nicotine patch. We examined the potential for gender to further moderate the relationship between BMI and treatment efficacy. In the placebo controlled trial (N = 1,621), 21-mg patch was no more effective than placebo for assisting biochemically verified point prevalence abstinence up to 1 year after quitting for women with higher BMI, but appeared to be effective for men at normal or high BMI (gender × BMI beta = -0.22, p = .004). We did not find differential long-term cessation outcomes among male or female smokers in the 15-mg patch trial (n = 705). However, we observed significantly higher rates of early lapse among women with higher BMI treated with nicotine patch across both trials. These results suggest that increased BMI may affect the efficacy of nicotine patch on reducing risk of early lapse in women. Additional research is needed to explore mechanisms of risk for decreased efficacy of this commonly used cessation aid. © The Author 2014. Published by Oxford University Press on behalf of the Society for Research on Nicotine and Tobacco. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  7. The largest forest fires in Portugal: the constraints of burned area size on the comprehension of fire severity.

    PubMed

    Tedim, Fantina; Remelgado, Ruben; Martins, João; Carvalho, Salete

    2015-01-01

    Portugal is a European country with highest forest fires density and burned area. Since beginning of official forest fires database in 1980, an increase in number of fires and burned area as well as appearance of large and catastrophic fires have characterized fire activity in Portugal. In 1980s, the largest fires were just a little bit over 10,000 ha. However, in the beginning of 21st century several fires occurred with a burned area over 20,000 ha. Some of these events can be classified as mega-fires due to their ecological and socioeconomic severity. The present study aimed to discuss the characterization of large forest fires trend, in order to understand if the largest fires that occurred in Portugal were exceptional events or evidences of a new trend, and the constraints of fire size to characterize fire effects because, usually, it is assumed that larger the fire higher the damages. Using Portuguese forest fire database and satellite imagery, the present study showed that the largest fires could be seen at the same time as exceptional events and as evidence of a new fire regime. It highlighted the importance of size and patterns of unburned patches within fire perimeter as well as heterogeneity of fire ecological severity, usually not included in fire regime description, which are critical to fire management and research. The findings of this research can be used in forest risk reduction and suppression planning.

  8. Analysis of sea use landscape pattern based on GIS: a case study in Huludao, China.

    PubMed

    Suo, Anning; Wang, Chen; Zhang, Minghui

    2016-01-01

    This study aims to analyse sea use landscape patterns on a regional scale based on methods of landscape ecology integrated with sea use spatial characteristics. Several landscape-level analysis indices, such as the dominance index, complex index, intensivity index, diversity index and sea congruency index, were established using Geographic Information System (GIS) and applied in Huludao, China. The results indicated that sea use landscape analysis indices, which were created based on the characteristics of sea use spatial patterns using GIS, are suitable to quantitatively describe the landscape patterns of sea use. They are operable tools for the landscape analysis of sea use. The sea use landscape in Huludao was dominated by fishing use with a landscape dominance index of 0.724. The sea use landscape is a complex mosaic with high diversity and plenty of fishing areas, as shown by the landscape complex index of 27.21 and the landscape diversity index of 1.25. Most sea use patches correspond to the marine functional zonation plan and the sea use congruency index is 0.89 in the fishing zone and 0.92 in the transportation zone.

  9. How does the foraging behavior of large herbivores cause different associational plant defenses?

    PubMed Central

    Huang, Yue; Wang, Ling; Wang, Deli; Zeng, De-Hui; Liu, Chen

    2016-01-01

    The attractant-decoy hypothesis predicts that focal plants can defend against herbivory by neighboring with preferred plant species when herbivores make decisions at the plant species scale. The repellent-plant hypothesis assumes that focal plants will gain protection by associating with nonpreferred neighbors when herbivores are selective at the patch scale. However, herbivores usually make foraging decisions at these scales simultaneously. The net outcomes of the focal plant vulnerability could depend on the spatial scale at which the magnitude of selectivity by the herbivores is stronger. We quantified and compared the within- and between-patch overall selectivity index (OSI) of sheep to examine the relationships between associational plant effects and herbivore foraging selectivity. We found that the sheep OSI was stronger at the within- than the between-patch scale, but focal plant vulnerability followed both hypotheses. Focal plants defended herbivory with preferred neighbors when the OSI difference between the two scales was large. Focal plants gained protection with nonpreferred neighbors when the OSI difference was narrowed. Therefore, the difference in selectivity by the herbivores between the relevant scales results in different associational plant defenses. Our study suggests important implications for understanding plant-herbivore interactions and grassland management. PMID:26847834

  10. Pseudo CT estimation from MRI using patch-based random forest

    NASA Astrophysics Data System (ADS)

    Yang, Xiaofeng; Lei, Yang; Shu, Hui-Kuo; Rossi, Peter; Mao, Hui; Shim, Hyunsuk; Curran, Walter J.; Liu, Tian

    2017-02-01

    Recently, MR simulators gain popularity because of unnecessary radiation exposure of CT simulators being used in radiation therapy planning. We propose a method for pseudo CT estimation from MR images based on a patch-based random forest. Patient-specific anatomical features are extracted from the aligned training images and adopted as signatures for each voxel. The most robust and informative features are identified using feature selection to train the random forest. The well-trained random forest is used to predict the pseudo CT of a new patient. This prediction technique was tested with human brain images and the prediction accuracy was assessed using the original CT images. Peak signal-to-noise ratio (PSNR) and feature similarity (FSIM) indexes were used to quantify the differences between the pseudo and original CT images. The experimental results showed the proposed method could accurately generate pseudo CT images from MR images. In summary, we have developed a new pseudo CT prediction method based on patch-based random forest, demonstrated its clinical feasibility, and validated its prediction accuracy. This pseudo CT prediction technique could be a useful tool for MRI-based radiation treatment planning and attenuation correction in a PET/MRI scanner.

  11. Optimization and charaterization of repaglinide biodegradable polymeric nanoparticle loaded transdermal patchs: in vitro and in vivo studies.

    PubMed

    Vijayan, V; Reddy, K Ravindra; Sakthivel, S; Swetha, C

    2013-11-01

    Biodegradable polymeric nanoparticles loaded Repaglinide were prepared by solvent extraction method. In this method chitosan, PLA and PCL were employed to prepare Repaglinide polymeric nanoparticles. Some of the formulation parameters were optimized to obtain high quality nanoparticles. The particles were spherical shape with sizes of 108.6 ± 3.4 nm to 220.6 ± 1.2 nm and the poly dispersity indexes were in the range of 0.06 to 0.44. The zeta potential was in the range between - 16.48 ± 2.02 and 30.52 ± 3.20 mV. The percentage entrapment efficiency (EE%) was 81.4 ± 1.8% to 92.7 ± 1.4%. The drug release behavior was studied by externally sink method and the release pattern of drug was found to follow zero order, Higuchi and Peppas equations. The optimized PLA-Repaglinide nanoparticles were loaded in Methocel transdermal patches. These transdermal patches were evaluated by physiochemical parameters, in vitro, ex vivo and in vivo studies. Based on in vivo hypoglycemic results, bioavailability parameters like AUC, AUMC, Cmax, Tmax, MRT, t1/2 and relative bioavailability were found to be 2218.88 μIU/mL/h, 381630.3 μIU/mL/h, 41.88 μIU/mL, 36 h, 83.24h, and 52.79 h respectively. The transdermal patch containing Repaglinide nanoparticles showed 76 fold effective than conventional oral administrations. Copyright © 2013 Elsevier B.V. All rights reserved.

  12. Influence of landscape characteristics on migration strategies of white-tailed deer

    USGS Publications Warehouse

    Grovenburg, T.W.; Jacques, C.N.; Klaver, R.W.; Deperno, C.S.; Brinkman, T.J.; Swanson, C.C.; Jenks, J.A.

    2011-01-01

    A trade-off exists for migrating animals as to whether to migrate or remain residents. Few studies have documented relationships between landscape variables and deer migration strategies. From 2000 to 2007 we captured 267 adult female white-tailed deer (Odocoileus virginianus) at 7 study sites in Minnesota and South Dakota and monitored 149 individuals through ≥3 seasonal migration periods (585 deer-migration seasons). All deer classified as obligate migrators with ≥3 migrations (range 3–9 migration seasons) maintained their obligate status for the duration of the study. Multinomial logistic odds ratios from generalized estimating equations indicated that the odds of being a resident increased by 1.4 and 1.3 per 1-unit increase in forest patch density and mean area, respectively, compared to migrating deer. Odds of being an obligate migrator increased by 0.7 and 0.8 per 1-unit decrease in forest patch density and mean area, respectively, compared to resident or conditional migrating deer. Areas inhabited by resident deer were characterized by greater number of forest patches per 100 ha and larger mean forest patch area than conditional and obligate migrant areas. Odds of migrating increased by 1.1 per 1-unit increase in deer winter severity index. Migration behavior of white-tailed deer varied among regions, and land-cover and landscape characteristics provided predictive indicators of migration strategies for deer that could have important implications for conservation, metapopulation dynamics, and species management.

  13. Use of social information in seabirds: compass rafts indicate the heading of food patches.

    PubMed

    Weimerskirch, Henri; Bertrand, Sophie; Silva, Jaime; Marques, Jose Carlos; Goya, Elisa

    2010-03-29

    Ward and Zahavi suggested in 1973 that colonies could serve as information centres, through a transfer of information on the location of food resources between unrelated individuals (Information Centre Hypothesis). Using GPS tracking and observations on group movements, we studied the search strategy and information transfer in two of the most colonial seabirds, Guanay cormorants (Phalacrocorax bougainvillii) and Peruvian boobies (Sula variegata). Both species breed together and feed on the same prey. They do return to the same feeding zone from one trip to the next indicating high unpredictability in the location of food resources. We found that the Guanay cormorants use social information to select their bearing when departing the colony. They form a raft at the sea surface whose position is continuously adjusted to the bearing of the largest returning columns of cormorants. As such, the raft serves as a compass signal that gives an indication on the location of the food patches. Conversely, Peruvian boobies rely mainly on personal information based on memory to take heading at departure. They search for food patches solitarily or in small groups through network foraging by detecting the white plumage of congeners visible at long distance. Our results show that information transfer does occur and we propose a new mechanism of information transfer based on the use of rafts off colonies. The use of rafts for information transfer may be common in central place foraging colonial seabirds that exploit short lasting and/or unpredictably distributed food patches. Over the past decades Guanay cormorants have declined ten times whereas Peruvian boobies have remained relatively stable. We suggest that the decline of the cormorants could be related to reduced social information opportunities and that social behaviour and search strategies have the potential to play an important role in the population dynamics of colonial animals.

  14. Use of Social Information in Seabirds: Compass Rafts Indicate the Heading of Food Patches

    PubMed Central

    Weimerskirch, Henri; Bertrand, Sophie; Silva, Jaime; Marques, Jose Carlos; Goya, Elisa

    2010-01-01

    Ward and Zahavi suggested in 1973 that colonies could serve as information centres, through a transfer of information on the location of food resources between unrelated individuals (Information Centre Hypothesis). Using GPS tracking and observations on group movements, we studied the search strategy and information transfer in two of the most colonial seabirds, Guanay cormorants (Phalacrocorax bougainvillii) and Peruvian boobies (Sula variegata). Both species breed together and feed on the same prey. They do return to the same feeding zone from one trip to the next indicating high unpredictability in the location of food resources. We found that the Guanay cormorants use social information to select their bearing when departing the colony. They form a raft at the sea surface whose position is continuously adjusted to the bearing of the largest returning columns of cormorants. As such, the raft serves as a compass signal that gives an indication on the location of the food patches. Conversely, Peruvian boobies rely mainly on personal information based on memory to take heading at departure. They search for food patches solitarily or in small groups through network foraging by detecting the white plumage of congeners visible at long distance. Our results show that information transfer does occur and we propose a new mechanism of information transfer based on the use of rafts off colonies. The use of rafts for information transfer may be common in central place foraging colonial seabirds that exploit short lasting and/or unpredictably distributed food patches. Over the past decades Guanay cormorants have declined ten times whereas Peruvian boobies have remained relatively stable. We suggest that the decline of the cormorants could be related to reduced social information opportunities and that social behaviour and search strategies have the potential to play an important role in the population dynamics of colonial animals. PMID:20360959

  15. Utilizing patch and site level greenhouse-gas concentration measurements in tandem with the prognostic model, ecosys

    NASA Astrophysics Data System (ADS)

    Morin, T. H.; Rey Sanchez, C.; Bohrer, G.; Riley, W. J.; Angle, J.; Mekonnen, Z. A.; Stefanik, K. C.; Wrighton, K. C.

    2016-12-01

    Estimates of wetland greenhouse gas (GHG) budgets currently have large uncertainties. While wetlands are the largest source of natural methane (CH4) emissions worldwide, they are also important carbon dioxide (CO2) sinks. Determining the GHG budget of a wetland is challenging, particularly because wetlands have intrinsically temporally and spatially heterogeneous land cover patterns and complex dynamics of CH4 production and emissions. These issues pose challenges to both measuring and modeling GHG budgets from wetlands. To improve wetland GHG flux predictability, we utilized the ecosys model to predict CH4 fluxes from a natural temperate estuarine wetland in northern Ohio. Multiple patches of terrain (that included Typha spp. and Nelumbo lutea) were represented as separate grid cells in the model. Cells were initialized with measured values but were allowed to dynamically evolve in response to meteorological, hydrological, and thermodynamic conditions. Trace gas surface emissions were predicted as the end result of microbial activity, physical transport, and plant processes. Corresponding to each model gridcell, measurements of dissolved gas concentrations were conducted with pore-water dialysis samplers (peepers). The peeper measurements were taken via a series of tubes, providing an undisturbed observation of the pore water concentrations of in situ dissolved gases along a vertical gradient. Non-steady state chambers and a flux tower provided both patch level and integrated site-level fluxes of CO2 and CH4. New Typha chambers were also developed to enclose entire plants and segregate the plant fluxes from soil/water fluxes. We expect ecosys to predict the seasonal and diurnal fluxes of CH4 from within each land cover type and to resolve where CH4 is generated within the soil column and its transmission mechanisms. We demonstrate the need for detailed information at both the patch and site level when using models to predict whole wetland ecosystem-scale GHG budgets.

  16. Global groundwater sustainability as a function of reliability, resilience and vulnerability

    NASA Astrophysics Data System (ADS)

    Thomas, B. F.

    2017-12-01

    The world's largest aquifers are a fundamental source of freshwater used for agricultural irrigation and to meet human water needs. Therefore, their stored volume of groundwater are linked with water security, which becomes more relevant during periods of drought. This work focus on understanding large-scale groundwater changes, where we introduce an approach to evaluate groundwater sustainability at a global scale. We employ a groundwater drought index to assess performance metrics of sustainable use (reliability, resilience, vulnerability) for the largest and most productive global aquifers. Spatiotemporal changes in total water storage are derived from remote sensing observations of gravity anomalies, from which the groundwater drought index is inferred. The performance metrics are then combined into a sustainability index. The results reveal a complex relationship between these sustainable use indicators, while considering monthly variability in groundwater storage. Combining the drought and sustainability indexes, as presented in this work, constitutes a measure for quantifying groundwater sustainability. This framework integrates changes in groundwater resources as a function of human influences and climate changes, thus opening a path to assess both progress towards sustainable use and water security.

  17. Impacts of changes in climate and landscape pattern on ecosystem services.

    PubMed

    Hao, Ruifang; Yu, Deyong; Liu, Yupeng; Liu, Yang; Qiao, Jianmin; Wang, Xue; Du, Jinshen

    2017-02-01

    The restoration of degraded vegetation can effectively improve ecosystem services, increase human well-being, and promote regional sustainable development. Understanding the changing trends in ecosystem services and their drivers is an important step in informing decision makers for the development of reasonable landscape management measures. From 2001 to 2014, we analyzed the changing trends in five critical ecosystem services in the Xilingol Grassland, which is typical of grasslands in North China, including net primary productivity (NPP), soil conservation (SC), soil loss due to wind (SL), water yield (WY) and water retention (WR). Additionally, we quantified how climatic factors and landscape patterns affect the five ecosystem services on both annual and seasonal time scales. Overall, the results indicated that vegetation restoration can effectively improve the five grassland ecosystem services, and precipitation (PPT) is the most critical climatic factor. The impact of changes in the normalized difference vegetation index (NDVI) was most readily detectable on the annual time scale, whereas the impact of changes in landscape pattern was most readily detectable on the seasonal time scale. A win-win situation in terms of grassland ecosystem services (e.g., vegetation productivity, SC, WR and reduced SL) can be achieved by increasing grassland aggregation, partitioning the largest grasslands, dividing larger areas of farmland into smaller patches, and increasing the area of appropriate forest stands. Our work may aid policymakers in developing regional landscape management schemes. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. IET. Coupling station (TAN620) and service room section and details. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    IET. Coupling station (TAN-620) and service room section and details. Interior electrical features inside coupling station. Cable terminal assembly for patch panel for plug. Ralph M. Parsons 902-4-ANP-620-E 401. Date: February 1954. Approved by INEEL Classification Office for public release. INEEL index code no. 035-0620-10-693-106958 - Idaho National Engineering Laboratory, Test Area North, Scoville, Butte County, ID

  19. Silvicultural Prescriptions Influence the Proportion of High-Quality Hardwood Butt Logs Harvested over a Half-Century of Management

    Treesearch

    John P. Brown; Melissa A. Thomas-Van Gundy; Thomas M. Schuler; Janice K. Wiedenbeck

    2018-01-01

    A long-term study on the Fernow Experimental Forest (FEF) in West Virginia provided an opportunity to test for differences in the timber quality of trees harvested from three silvicultural practices (HarvestType): diameter-limit, patch cutting, and single-tree selection. The effects of HarvestType and site index (SI) over time on the harvested proportion of trees with...

  20. Large herbivores surf waves of green-up during spring

    PubMed Central

    Monteith, Kevin L.; Aikens, Ellen O.; Hayes, Matthew M.; Hersey, Kent R.; Middleton, Arthur D.; Oates, Brendan A.; Sawyer, Hall; Scurlock, Brandon M.; Kauffman, Matthew J.

    2016-01-01

    The green wave hypothesis (GWH) states that migrating animals should track or ‘surf’ high-quality forage at the leading edge of spring green-up. To index such high-quality forage, recent work proposed the instantaneous rate of green-up (IRG), i.e. rate of change in the normalized difference vegetation index over time. Despite this important advancement, no study has tested the assumption that herbivores select habitat patches at peak IRG. We evaluated this assumption using step selection functions parametrized with movement data during the green-up period from two populations each of bighorn sheep, mule deer, elk, moose and bison, totalling 463 individuals monitored 1–3 years from 2004 to 2014. Accounting for variables that typically influence habitat selection for each species, we found seven of 10 populations selected patches exhibiting high IRG—supporting the GWH. Nonetheless, large herbivores selected for the leading edge, trailing edge and crest of the IRG wave, indicating that other mechanisms (e.g. ruminant physiology) or measurement error inherent with satellite data affect selection for IRG. Our evaluation indicates that IRG is a useful tool for linking herbivore movement with plant phenology, paving the way for significant advancements in understanding how animals track resource quality that varies both spatially and temporally. PMID:27335416

  1. Cement-Induced Chromate Occupational Allergic Contact Dermatitis.

    PubMed

    Kridin, Khalaf; Bergman, Reuven; Khamaisi, Mogher; Zelber-Sagi, Shira; Weltfriend, Sara

    2016-01-01

    Hexavalent chromium in cement is a common cause of occupational allergic contact dermatitis (OACD). Analysis of patch test data during 1999 to 2013 was done. Patients with cement-induced chromate OACD filled the Dermatology Life Quality Index, graded 1 to 5. Of 4846 consecutive patients who were patch tested, 146 (3%) were chromate-sensitive. Of 46 (31.5%) who presented with chromate OACD, 27 (59%) had cement-induced chromate OACD. The proportion of chromate-sensitive patients with clinically relevant cement exposure increased from 7.7% in 2002 to 2004 to 28.7% in 2011 to 2013 (P = 0.04). The median age of presentation was younger than for other chromate-sensitive patients (32 vs 42 years). Hand eczema (88.9%) was the most frequent clinical presentation. Of the 27 with cement-induced chromate OACD, 21 (77.8%) had ongoing dermatitis at the time of the review. Although 14/27 (51.9%) changed their occupation to avoid exposure to cement, symptoms persisted in 9/14 (64.3%). Prolonged exposure to cement before development of symptoms was associated with chronicity. All the symptomatic patients experienced at least a moderate effect on their quality of life (grade 3 or higher on the Dermatology Life Quality Index). We recommend the adoption of the European legislation in Israel, to reduce the prevalence of chromate OACD from cement.

  2. Large herbivores surf waves of green-up during spring

    USGS Publications Warehouse

    Merkle, Jerod A.; Monteith, Kevin L.; Aikens, Ellen O.; Hayes, Matthew M.; Hersey, Kent R.; Middleton, Arthur D.; Oates, Brendan A.; Sawyer, Hall; Scurlock, Brandon M.; Kauffman, Matthew J.

    2016-01-01

    The green wave hypothesis (GWH) states that migrating animals should track or ‘surf’ high-quality forage at the leading edge of spring green-up. To index such high-quality forage, recent work proposed the instantaneous rate of green-up (IRG), i.e. rate of change in the normalized difference vegetation index over time. Despite this important advancement, no study has tested the assumption that herbivores select habitat patches at peak IRG. We evaluated this assumption using step selection functions parametrized with movement data during the green-up period from two populations each of bighorn sheep, mule deer, elk, moose and bison, totalling 463 individuals monitored 1–3 years from 2004 to 2014. Accounting for variables that typically influence habitat selection for each species, we found seven of 10 populations selected patches exhibiting high IRG—supporting the GWH. Nonetheless, large herbivores selected for the leading edge, trailing edge and crest of the IRG wave, indicating that other mechanisms (e.g. ruminant physiology) or measurement error inherent with satellite data affect selection for IRG. Our evaluation indicates that IRG is a useful tool for linking herbivore movement with plant phenology, paving the way for significant advancements in understanding how animals track resource quality that varies both spatially and temporally.

  3. Large herbivores surf waves of green-up during spring.

    PubMed

    Merkle, Jerod A; Monteith, Kevin L; Aikens, Ellen O; Hayes, Matthew M; Hersey, Kent R; Middleton, Arthur D; Oates, Brendan A; Sawyer, Hall; Scurlock, Brandon M; Kauffman, Matthew J

    2016-06-29

    The green wave hypothesis (GWH) states that migrating animals should track or 'surf' high-quality forage at the leading edge of spring green-up. To index such high-quality forage, recent work proposed the instantaneous rate of green-up (IRG), i.e. rate of change in the normalized difference vegetation index over time. Despite this important advancement, no study has tested the assumption that herbivores select habitat patches at peak IRG. We evaluated this assumption using step selection functions parametrized with movement data during the green-up period from two populations each of bighorn sheep, mule deer, elk, moose and bison, totalling 463 individuals monitored 1-3 years from 2004 to 2014. Accounting for variables that typically influence habitat selection for each species, we found seven of 10 populations selected patches exhibiting high IRG-supporting the GWH. Nonetheless, large herbivores selected for the leading edge, trailing edge and crest of the IRG wave, indicating that other mechanisms (e.g. ruminant physiology) or measurement error inherent with satellite data affect selection for IRG. Our evaluation indicates that IRG is a useful tool for linking herbivore movement with plant phenology, paving the way for significant advancements in understanding how animals track resource quality that varies both spatially and temporally. © 2016 The Author(s).

  4. Assessing the role of landscape connectivity on Opisthorchis viverrini transmission dynamics.

    PubMed

    Wang, Yi-Chen; Yuen, Roy; Feng, Chen-Chieh; Sithithaworn, Paiboon; Kim, Ick-Hoi

    2017-08-01

    Opisthorchis viverrini (Ov) is one of the most important human parasitic diseases in Southeast Asia. Although the concept of connectivity is widely used to comprehend disease dispersal, knowledge of the influences of landscape connectivity on Ov transmission is still rudimentary. This study aimed to investigate the role of landscape connectivity in Ov transmission between the human and the first intermediate snail hosts. Fieldwork was conducted in three villages respectively in Kamalasai District, Kalasin Province, Phu Wiang District, Khon Kaen Province, and Nong Saeng District, Udon Thani Province. Bithynia snails were collected to examine parasitic infections, water samples were analyzed for fecal contamination, and locations of septic tanks and connections between habitat patches with observable water movement were surveyed. Euclidean distance, topological link and distance, and graph measures were employed to quantify the connectivity between human and snail habitats. The findings showed that snail patches with higher fecal contents were generally located nearer to septic tanks. The statistically significant results for the topological link and distance measures highlighted the importance of water in functionally facilitating Ov transmission. Graph measures revealed differences in landscape connectivity across the sites. The site with the largest landscape component size and the most mutually connected snail patches coincided with the presence of Ov parasite, reinforcing its higher risk for human to snail transmission. The site with the dissected landscape structure potentially limited the transmission. This study underscored the potential effect of landscape connectivity on Ov transmission, contributing to the understanding of the spatial variation of Ov infection risk. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  5. Multiscale assessment of landscape structure in heterogeneous forested area

    NASA Astrophysics Data System (ADS)

    Simoniello, T.; Pignatti, S.; Carone, M. T.; Fusilli, L.; Lanfredi, M.; Coppola, R.; Santini, F.

    2010-05-01

    The characterization of landscape structure in space or time is fundamental to infer ecological processes (Ingegnoli, 2002). Landscape pattern arrangements strongly influence forest ecological functioning and biodiversity, as an example landscape fragmentation can induce habitat degradation reducing forest species populations or limiting their recolonization. Such arrangements are spatially correlated and scale-dependent, therefore they have distinctive operational-scales at which they can be best characterized (Wu, 2004). In addition, the detail of the land cover classification can have substantial influences on resulting pattern quantification (Greenberg et al.2001). In order to evaluate the influence of the observational scales and labelling details, we investigated a forested area (Pollino National Park; southern Italy) by analyzing the patch arrangement derived from three remote sensing sensors having different spectral and spatial resolutions. In particular, we elaborated data from the hyperspectral MIVIS (102 bands; ~7m) and Hyperion (220 bands; 30m), and the multispectral Landsat-TM (7 bands; 30m). Moreover, to assess the landscape evolution we investigated the hierarchical structure of the study area (landscape, class, patch) by elaborating two Landsat-TM acquired in 1987 and 1998. Preprocessed data were classified by adopting a supervised procedure based on the Minimum Distance classifier. The obtained labelling correspond to Corine level 5 for the high resolution MIVIS data, to Corine level 4 for Hyperion and to an intermediate level 4-3 for TM data. The analysis was performed by taking into account patch density, diversity and evenness at landscape level; mean patch size and interdispersion at class level; patch structure and perimeter regularity at patch level. The three sensors described a landscape with a quite high level of richness and distribution. The high spectral and spatial resolution of MIVIS data provided the highest diversity level (SHDI = 2.05), even if the results obtained for TM were not so different (1.93), Hyperion showed the lowest value (1.79). The obtained evenness index was similar for all the landscapes (~ 0.72). At class level, the interdispersion increases as the spatial and spectral resolution power decrease. Due to the low labelling detail, TM classes represent an aggregation of MIVIS and Hyperion classes; therefore they result larger and more diffused over the territory favouring higher interspersion values in the computation. The investigation of the patch structure highlighted the highest MIVIS capability in describing the patch articulation; Hyperion and TM showed quite similar situation. The historical analysis based on TM imagery showed a fragmentation process for some forested patches (mainly beeches): an increase of structure complexity (higher FRACT) is coupled with a higher patch number and an extension reduction. On the whole, the obtained results showed that the multispectral Landsat-TM images represent a good data source for supporting studies on landscape structure of forested areas and that for analyzing the articulation of particular species the high spectral resolution needs to be coupled with a high spatial resolution, i.e. Hyperion sampling is not adequate for such a purpose.

  6. Gap Shape Classification using Landscape Indices and Multivariate Statistics

    PubMed Central

    Wu, Chih-Da; Cheng, Chi-Chuan; Chang, Che-Chang; Lin, Chinsu; Chang, Kun-Cheng; Chuang, Yung-Chung

    2016-01-01

    This study proposed a novel methodology to classify the shape of gaps using landscape indices and multivariate statistics. Patch-level indices were used to collect the qualified shape and spatial configuration characteristics for canopy gaps in the Lienhuachih Experimental Forest in Taiwan in 1998 and 2002. Non-hierarchical cluster analysis was used to assess the optimal number of gap clusters and canonical discriminant analysis was used to generate the discriminant functions for canopy gap classification. The gaps for the two periods were optimally classified into three categories. In general, gap type 1 had a more complex shape, gap type 2 was more elongated and gap type 3 had the largest gaps that were more regular in shape. The results were evaluated using Wilks’ lambda as satisfactory (p < 0.001). The agreement rate of confusion matrices exceeded 96%. Differences in gap characteristics between the classified gap types that were determined using a one-way ANOVA showed a statistical significance in all patch indices (p = 0.00), except for the Euclidean nearest neighbor distance (ENN) in 2002. Taken together, these results demonstrated the feasibility and applicability of the proposed methodology to classify the shape of a gap. PMID:27901127

  7. Gap Shape Classification using Landscape Indices and Multivariate Statistics.

    PubMed

    Wu, Chih-Da; Cheng, Chi-Chuan; Chang, Che-Chang; Lin, Chinsu; Chang, Kun-Cheng; Chuang, Yung-Chung

    2016-11-30

    This study proposed a novel methodology to classify the shape of gaps using landscape indices and multivariate statistics. Patch-level indices were used to collect the qualified shape and spatial configuration characteristics for canopy gaps in the Lienhuachih Experimental Forest in Taiwan in 1998 and 2002. Non-hierarchical cluster analysis was used to assess the optimal number of gap clusters and canonical discriminant analysis was used to generate the discriminant functions for canopy gap classification. The gaps for the two periods were optimally classified into three categories. In general, gap type 1 had a more complex shape, gap type 2 was more elongated and gap type 3 had the largest gaps that were more regular in shape. The results were evaluated using Wilks' lambda as satisfactory (p < 0.001). The agreement rate of confusion matrices exceeded 96%. Differences in gap characteristics between the classified gap types that were determined using a one-way ANOVA showed a statistical significance in all patch indices (p = 0.00), except for the Euclidean nearest neighbor distance (ENN) in 2002. Taken together, these results demonstrated the feasibility and applicability of the proposed methodology to classify the shape of a gap.

  8. Age-0 Lost River sucker and shortnose sucker nearshore habitat use in Upper Klamath Lake, Oregon: A patch occupancy approach

    USGS Publications Warehouse

    Burdick, S.M.; Hendrixson, H.A.; VanderKooi, S.P.

    2008-01-01

    We examined habitat use by age-0 Lost River suckers Deltistes luxatus and shortnose suckers Chasmistes brevirostris over six substrate classes and in vegetated and nonvegetated areas of Upper Klamath Lake, Oregon. We used a patch occupancy approach to model the effect of physical habitat and water quality conditions on habitat use. Our models accounted for potential inconsistencies in detection probability among sites and sampling occasions as a result of differences in fishing gear types and techniques, habitat characteristics, and age-0 fish size and abundance. Detection probability was greatest during mid- to late summer, when water temperatures were highest and age-0 suckers were the largest. The proportion of sites used by age-0 suckers was inversely related to depth (range = 0.4-3.0 m), particularly during late summer. Age-0 suckers were more likely to use habitats containing small substrate (64 mm) and habitats with vegetation than those without vegetation. Relatively narrow ranges in dissolved oxygen, temperature, and pH prevented us from detecting effects of these water quality features on age-0 sucker nearshore habitat use.

  9. Use of the new Nitrogen Index tier zero to assess the effects of nitrogen fertilizer on N2O emissions from cropping systems in Mexico

    USDA-ARS?s Scientific Manuscript database

    Mexico is one of the largest users of N fertilizer in the world, and the 2nd largest user in Latin America after Brazil. Across large areas of Mexico, N fertilizers are being over-applied, resulting in lower N use efficiencies. Mexico’s trace gas inventory (in CO2 equivalents) reports that agricultu...

  10. Estimation of Energy Expenditure Using a Patch-Type Sensor Module with an Incremental Radial Basis Function Neural Network

    PubMed Central

    Li, Meina; Kwak, Keun-Chang; Kim, Youn Tae

    2016-01-01

    Conventionally, indirect calorimetry has been used to estimate oxygen consumption in an effort to accurately measure human body energy expenditure. However, calorimetry requires the subject to wear a mask that is neither convenient nor comfortable. The purpose of our study is to develop a patch-type sensor module with an embedded incremental radial basis function neural network (RBFNN) for estimating the energy expenditure. The sensor module contains one ECG electrode and a three-axis accelerometer, and can perform real-time heart rate (HR) and movement index (MI) monitoring. The embedded incremental network includes linear regression (LR) and RBFNN based on context-based fuzzy c-means (CFCM) clustering. This incremental network is constructed by building a collection of information granules through CFCM clustering that is guided by the distribution of error of the linear part of the LR model. PMID:27669249

  11. The Genetic Diversity of Two Brazilian Vellozia (Velloziaceae) with Different Patterns of Spatial Distribution and Pollination Biology

    PubMed Central

    FRANCESCHINELLI, EDIVANI VILLARON; JACOBI, CLAUDIA M.; DRUMMOND, MARCELA GONÇALVES; RESENDE, MARCELO F. SILVEIRA

    2006-01-01

    • Background and Aims The genetic structure and variability of two species of Vellozia (Velloziaceae) with restricted distribution in high-altitude quartzitic fields in south-eastern Brazil were studied. Vellozia epidendroides is short, grows on pebbly or sandy soil, and is pollinated by bees. Vellozia leptopetala is arborescent, grows on rock outcrops, and is pollinated by bees and hummingbirds. Both are self-incompatible and have a short, massive flowering strategy. The study aimed to associate differences in their genetic diversity and structure with their microhabitat distribution and pollination ecology. • Methods Leaves from 106 and 139 plants of V. epidendroides and V. leptopetala, respectively, were collected from five patches of each species and prepared for electrophoretic analyses. • Key Results Five enzyme systems could be reliably scored for both species. Vellozia epidendroides showed 100 % of the loci polymorphic for almost all patches. The average number of alleles per locus ranged between 2·2 and 2·4 among patches. The Wright's fixation index (F) for this species was 0·226. A significant θp value indicates that there is a reasonable genetic divergence among patches. Vellozia leptopetala presented 47·5 % of polymorphic loci. All levels of P, A, Ap and of heterozygosities were lower than those of V. epidendroides. Vellozia leptopetala showed high inbreeding within patches. • Conclusions The relatively high values of genetic diversity indices found for V. epidendroides may be associated with its large and widespread populations. On the other hand, the low values of genetic diversity found for V. leptopetala may be related to physical isolation on outcrops and intensive foraging by territorial hummingbirds, which may hinder gene flow among patches, aggravated by the very restricted seed dispersal characteristic of the genus, that facilitates sibling mating. It is important to stress the need to preserve the specific habitats of these species of Vellozia, in particular those of V. leptopetala that has lower genetic diversity and is restricted to rock outcrop environments. PMID:16446285

  12. Smoking Cessation Treatment for Patients With Mental Disorders Using CBT and Combined Pharmacotherapy.

    PubMed

    Loreto, Aline Rodrigues; Carvalho, Carlos Felipe Cavalcanti; Frallonardo, Fernanda Piotto; Ismael, Flavia; Andrade, Arthur Guerra de; Castaldelli-Maia, João Maurício

    2017-01-01

    The aim of this study was to investigate smoking treatment effectiveness and retention in a population with and without mental disorders (MD). Participants received cognitive behavioral therapy (CBT) plus nicotine patch alone or in combination with other medications (i.e., gum, bupropion, or nortriptyline) for smoking cessation treatment in a Brazilian Psychosocial Care Center unit (CAPS), taking into account sociodemographics and smoking profile covariates. The study involved comparison of treatment success (seven-day point prevalence abstinence at the end of the treatment) and retention (presence of the individual in all of the four medical consultations and six group sessions) in two subsamples of patients with MD (n = 267) and without MD (n = 397) who were included in a six-week treatment provided by a CAPS from 2007 to 2013. The treatment protocol comprised group CBT and pharmacotherapy (nicotine patches, nicotine gums, and bupropion and nortriptyline available, prescribed by psychiatrists). Within patients with MD, CBT plus nicotine patch plus bupropion (aOR = 2.00, 95% CI [1.14, 3.50], p = .015) and CBT plus nicotine patch plus gum (aOR = 2.10, 95% CI [1.04, 4.23], p = .036) were associated with treatment success. Within patients without MD, female gender (aOR = 0.60, 95% CI [0.37, 0.95], p = .031) and lower Heaviness of Smoking Index score (aOR = 0.80, 95% CI [0.65, 0.99], p = .048) were associated with treatment success. No variable was associated with dropout or retention within patients with or without MD. Our findings support the use of CBT plus nicotine patch plus bupropion as well as CBT plus nicotine patch plus gum in samples with high rates of medical, psychiatric, and addiction disorders. These findings support those of previous studies in the general population. Pharmacological treatment associated with group CBT based on cognitive-behavioral concepts and combined with ongoing MD treatment seems to be the best option for smoking cessation treatment among patients with MD. Units that deal with patients with MD, such as CAPS in Brazil, should be encouraged to treat smoking addiction in this population. Future studies should investigate retention rates in other samples of patients with MD.

  13. What predicts the strength of simultaneous color contrast?

    PubMed Central

    Ratnasingam, Sivalogeswaran; Anderson, Barton L.

    2017-01-01

    The perceived color of a uniform image patch depends not only on the spectral content of the light that reaches the eye but also on its context. One of the most extensively studied forms of context dependence is a simultaneous contrast display: a center-surround display containing a homogeneous target embedded in a homogenous surround. A number of models have been proposed to account for the chromatic transformations of targets induced by such surrounds, but they were typically derived in the restricted context of experiments using achromatic targets with surrounds that varied along the cardinal axes of color space. There is currently no theoretical consensus that predicts the target color that produces the largest perceived color difference for two arbitrarily chosen surround colors, or what surround would give the largest color induction for an arbitrarily chosen target. Here, we present a method for assessing simultaneous contrast that avoids some of the methodological issues that arise with nulling and matching experiments and diminishes the contribution of temporal adaption. Observers were presented with pairs of center-surround patterns and ordered them from largest to smallest in perceived dissimilarity. We find that the perceived difference for two arbitrarily chosen surrounds is largest when the target falls on the line connecting the two surrounds in color space. We also find that the magnitude of induction is larger for larger differences between chromatic targets and surrounds of the same hue. Our results are consistent with the direction law (Ekroll & Faul, 2012b), and with a generalization of Kirschmann's fourth law, even for viewing conditions that do not favor temporal adaptation. PMID:28245494

  14. Constraining Earthquake Source Parameters in Rupture Patches and Rupture Barriers on Gofar Transform Fault, East Pacific Rise from Ocean Bottom Seismic Data

    NASA Astrophysics Data System (ADS)

    Moyer, P. A.; Boettcher, M. S.; McGuire, J. J.; Collins, J. A.

    2015-12-01

    On Gofar transform fault on the East Pacific Rise (EPR), Mw ~6.0 earthquakes occur every ~5 years and repeatedly rupture the same asperity (rupture patch), while the intervening fault segments (rupture barriers to the largest events) only produce small earthquakes. In 2008, an ocean bottom seismometer (OBS) deployment successfully captured the end of a seismic cycle, including an extensive foreshock sequence localized within a 10 km rupture barrier, the Mw 6.0 mainshock and its aftershocks that occurred in a ~10 km rupture patch, and an earthquake swarm located in a second rupture barrier. Here we investigate whether the inferred variations in frictional behavior along strike affect the rupture processes of 3.0 < M < 4.5 earthquakes by determining source parameters for 100 earthquakes recorded during the OBS deployment.Using waveforms with a 50 Hz sample rate from OBS accelerometers, we calculate stress drop using an omega-squared source model, where the weighted average corner frequency is derived from an empirical Green's function (EGF) method. We obtain seismic moment by fitting the omega-squared source model to the low frequency amplitude of individual spectra and account for attenuation using Q obtained from a velocity model through the foreshock zone. To ensure well-constrained corner frequencies, we require that the Brune [1970] model provides a statistically better fit to each spectral ratio than a linear model and that the variance is low between the data and model. To further ensure that the fit to the corner frequency is not influenced by resonance of the OBSs, we require a low variance close to the modeled corner frequency. Error bars on corner frequency were obtained through a grid search method where variance is within 10% of the best-fit value. Without imposing restrictive selection criteria, slight variations in corner frequencies from rupture patches and rupture barriers are not discernable. Using well-constrained source parameters, we find an average stress drop of 5.7 MPa in the aftershock zone compared to values of 2.4 and 2.9 MPa in the foreshock and swarm zones respectively. The higher stress drops in the rupture patch compared to the rupture barriers reflect systematic differences in along strike fault zone properties on Gofar transform fault.

  15. Skeletal muscle mass in human athletes: What is the upper limit?

    PubMed

    Abe, Takashi; Buckner, Samuel L; Dankel, Scott J; Jessee, Matthew B; Mattocks, Kevin T; Mouser, J Grant; Loenneke, Jeremy P

    2018-01-22

    To examine the amount of absolute and relative skeletal muscle mass (SM) in large sized athletes to investigate the potential upper limit of whole body muscle mass accumulation in the human body. Ninety-five large-sized male athletes and 48 recreationally active males (control) had muscle thickness measured by ultrasound at nine sites on the anterior and posterior aspects of the body. SM was estimated from an ultrasound-derived prediction equation. Body density was estimated by hydrostatic weighing technique, and then body fat percentage and fat-free mass (FFM) were calculated. We used the SM index and FFM index to adjust for the influence of standing height (ie, divided by height squared). Ten of the athletes had more than 100 kg of FFM, including the largest who had 120.2 kg, while seven of the athletes had more than 50 kg of SM, including the largest who had 59.3 kg. FFM index and SM index were higher in athletes compared to controls and the percentage differences between the two groups were 44% and 56%, respectively. The FFM index increased linearly up to 90 kg of body mass, and then the values leveled off in those of increasing body mass. Similarly, the SM index increased in a parabolic fashion reaching a plateau (approximately 17 kg/m 2 ) beyond 120 kg body mass. SM index may be a valuable indicator for determining skeletal muscle mass in athletes. A SM index of approximately 17 kg/m 2 may serve as the potential upper limit in humans. © 2018 Wiley Periodicals, Inc.

  16. Dynamics Change of Vegetated Lands in A Highway Corridor during 37 Years (Case study of Jagorawi Toll Road, Jakarta-Bogor)

    NASA Astrophysics Data System (ADS)

    Perdana, B. P.; Setiawan, Y.; Prasetyo, L. B.

    2018-02-01

    Recently, a highway development is required as a liaison between regions to support the economic development of the regions. Even the availability of highways give positive impacts, it also has negative impacts, especially related to the changes of vegetated lands. This study aims to determine the change of vegetation coverage in Jagorawi corridor Jakarta-Bogor during 37 years, and to analyze landscape patterns in the corridor based on distance factor from Jakarta to Bogor. In this study, we used a long-series of Landsat images taken by Landsat 2 MSS (1978), Landsat 5 TM (1988, 1995, and 2005) and Landsat 8 OLI/TIRS (2015). Analysis of landscape metrics was conducted through patch analysis approach to determine the change of landscape patterns in the Jagorawi corridor Jakarta-Bogor. Several parameters of landscape metrics used are Number of Patches (NumP), Mean Patch Size (MPS), Mean Shape Index (MSI), and Edge Density (ED). These parameters can be used to provide information of structural elements of landscape, composition and spatial distribution in the corridor. The results indicated that vegetation coverage in the Jagorawi corridor Jakarta-Bogor decreased about 48% for 35 years. Moreover, NumP value increased and decreasing of MPS value as a means of higher fragmentation level occurs with patch size become smaller. Meanwhile, The increase in ED parameters indicates that vegetated land is damaged annually. MSI parameter shows a decrease in every year which means land degradation on vegetated land. This indicates that the declining value of MSI will have an impact on land degradation.

  17. Maximal refraction and superluminal propagation in a gaseous nanolayer.

    PubMed

    Keaveney, J; Hughes, I G; Sargsyan, A; Sarkisyan, D; Adams, C S

    2012-12-07

    We present an experimental measurement of the refractive index of high density Rb vapor in a gaseous atomic nanolayer. We use heterodyne interferometry to measure the relative phase shift between two copropagating laser beams as a function of the laser detuning and infer a peak index n=1.26±0.02, close to the theoretical maximum of 1.31. The large index has a concomitant large index gradient creating a region with steep anomalous dispersion where a subnanosecond optical pulse is advanced by >100 ps over a propagation distance of 390 nm, corresponding to a group index n(g)=-(1.0±0.1)×10(5), the largest negative group index measured to date.

  18. Experimental Study on Damage Detection in Timber Specimens Based on an Electromechanical Impedance Technique and RMSD-Based Mahalanobis Distance

    PubMed Central

    Wang, Dansheng; Wang, Qinghua; Wang, Hao; Zhu, Hongping

    2016-01-01

    In the electromechanical impedance (EMI) method, the PZT patch performs the functions of both sensor and exciter. Due to the high frequency actuation and non-model based characteristics, the EMI method can be utilized to detect incipient structural damage. In recent years EMI techniques have been widely applied to monitor the health status of concrete and steel materials, however, studies on application to timber are limited. This paper will explore the feasibility of using the EMI technique for damage detection in timber specimens. In addition, the conventional damage index, namely root mean square deviation (RMSD) is employed to evaluate the level of damage. On that basis, a new damage index, Mahalanobis distance based on RMSD, is proposed to evaluate the damage severity of timber specimens. Experimental studies are implemented to detect notch and hole damage in the timber specimens. Experimental results verify the availability and robustness of the proposed damage index and its superiority over the RMSD indexes. PMID:27782088

  19. Experimental Study on Damage Detection in Timber Specimens Based on an Electromechanical Impedance Technique and RMSD-Based Mahalanobis Distance.

    PubMed

    Wang, Dansheng; Wang, Qinghua; Wang, Hao; Zhu, Hongping

    2016-10-22

    In the electromechanical impedance (EMI) method, the PZT patch performs the functions of both sensor and exciter. Due to the high frequency actuation and non-model based characteristics, the EMI method can be utilized to detect incipient structural damage. In recent years EMI techniques have been widely applied to monitor the health status of concrete and steel materials, however, studies on application to timber are limited. This paper will explore the feasibility of using the EMI technique for damage detection in timber specimens. In addition, the conventional damage index, namely root mean square deviation (RMSD) is employed to evaluate the level of damage. On that basis, a new damage index, Mahalanobis distance based on RMSD, is proposed to evaluate the damage severity of timber specimens. Experimental studies are implemented to detect notch and hole damage in the timber specimens. Experimental results verify the availability and robustness of the proposed damage index and its superiority over the RMSD indexes.

  20. Land Capability Potential Index (LCPI) for the Lower Missouri River Valley

    USGS Publications Warehouse

    Jacobson, Robert B.; Chojnacki, Kimberly A.; Reuter, Joanna M.

    2007-01-01

    The Land Capability Potential Index (LCPI) was developed to serve as a relatively coarse-scale index to delineate broad land capability classes in the valley of the Lower Missouri River. The index integrates fundamental factors that determine suitability of land for various uses, and may provide a useful mechanism to guide land-management decisions. The LCPI was constructed from integration of hydrology, hydraulics, land-surface elevations, and soil permeability (or saturated hydraulic conductivity) datasets for an area of the Lower Missouri River, river miles 423–670. The LCPI estimates relative wetness based on intersecting water-surface elevations, interpolated from measurements or calculated from hydraulic models, with a high-resolution land-surface elevation dataset. The potential for wet areas to retain or drain water is assessed using soil-drainage classes that are estimated from saturated hydraulic conductivity of surface soils. Terrain mapping that delineates areas with convex, concave, and flat parts of the landscape provides another means to assess tendency of landscape patches to retain surface water.

  1. Improved Lung Perfusion After Left Pulmonary Artery Patch Enlargement During the Norwood Operation.

    PubMed

    Salehi Ravesh, Mona; Scheewe, Jens; Attmann, Tim; Al Bulushi, Abdullah; Jussli-Melchers, Marka-Jill; Jerosch-Herold, Michael; Gabbert, Dominik D; Wegner, Philip; Kramer, Hans-Heiner; Rickers, Carsten

    2018-05-01

    Optimal pulmonary perfusion is crucial for a well-functioning Fontan circulation in patients with hypoplastic left heart syndrome (HLHS). To obtain an adequate size of the left pulmonary artery (LPA), patch enlargement is a routine part of the hemi-Fontan procedure in our center. However, LPA patch enlargement at the time of the modified Norwood procedure may have surgical advantages. Therefore, the aim of this study was to evaluate whether anatomic and functional effects of the new approach are superior. A total of 51 consecutive HLHS patients underwent a cardiovascular magnetic resonance imaging study including assessment of LPA anatomy and lung perfusion. The LPA of 20 patients was enlarged during the modified Norwood procedure (group N) and of 31 patients during the hemi-Fontan procedure (group HF). The median indexed cross-sectional area of the LPA in group N was significantly higher than in group HF (49.5 versus 27.9 mm 2 /m 2 , p < 0.0001). The regional pulmonary perfusion as measured by first-pass, contrast-enhanced signal intensity upslope was significantly improved in group N (left side 0.67 s -1 versus 0.40 s -1 , p = 0.002; right side 0.84 s -1 versus 0.52 s -1 , p = 0.01). The total hemi-Fontan bypass and procedure times were significantly shorter in group N (both p < 0.001). These first magnetic resonance imaging data show that HLHS patients after LPA patch enlargement during the modified Norwood procedure have significantly higher LPA cross-sectional areas and show improved lung perfusion and shorter overall procedure time as compared with LPA patching during second stage (hemi-Fontan). Therefore, this promising surgical technique may improve blood flow dynamics of the Fontan circulation in the long run. Copyright © 2018 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.

  2. Biological Communities and Geomorphology of Patch Reefs in Biscayne National Park, Florida, U.S.A.

    USGS Publications Warehouse

    Kuffner, Ilsa B.; Brock, John C.; Grober-Dunsmore, Rikki; Hickey, T. Don; Bonito, Victor; Bracone, Jeremy E.; Wright, C. Wayne

    2008-01-01

    Coral reef ecosystem management benefits from continual, quantitative assessment of the resources being managed, plus assessment of factors that affect distribution patterns of organisms in the ecosystem. In this study, we investigated the relationships among physical, benthic, and fish variables in effort to help explain the distribution patterns of ecologically and economically important species on twelve patch reefs within Biscayne National Park (BNP), Florida, U.S.A. We visited 196 randomly-located sampling stations across twelve shallow (< 10m) patch reefs, using SCUBA to conduct our surveys. We measured physical variables (e.g., substratum type), estimated the percent cover of benthic community members (e.g., coral, algae), and counted and estimated mean size for each fish species observed. We also used high-density bathymetric data collected remotely via airborne laser surveying (Experimental Advanced Airborne Research Lidar (EAARL)) to calculate rugosity (bumpiness) of the reef habitat. Here we present our findings visually by graphing our quantitative community and physical structure data simultaneously in a GIS map format. You will see that biological organisms arrange themselves on each patch reef in a non-random manner. For example, many species of fish prefer to locate themselves in areas of the reef where the rugosity index is high. Rugose parts of the reef provide them with good hiding places from predators. These maps (and the data used to create them) are permanent records of the status of reef resources found on these twelve patch reefs in BNP as of September, 2003. The survey data found in the shapefile located on this CD product includes benthic percent cover data for algae, coral, encrusting invertebrates, and substratum type, in addition to gorgonian abundance and volume, total fish abundance and species richness, and specific counts for Acanthurids (surgeonfish), Scarids (parrotfish), Lutjanids (snappers), Haemulids (grunts), Serranids (groupers), and Pomacentrids (damselfish).

  3. Enhancing SMAP Soil Moisture Retrievals via Superresolution Techniques

    NASA Astrophysics Data System (ADS)

    Beale, K. D.; Ebtehaj, A. M.; Romberg, J. K.; Bras, R. L.

    2017-12-01

    Soil moisture is a key state variable that modulates land-atmosphere interactions and its high-resolution global scale estimates are essential for improved weather forecasting, drought prediction, crop management, and the safety of troop mobility. Currently, NASA's Soil Moisture Active/Passive (SMAP) satellite provides a global picture of soil moisture variability at a resolution of 36 km, which is prohibitive for some hydrologic applications. The goal of this research is to enhance the resolution of SMAP passive microwave retrievals by a factor of 2 to 4 using modern superresolution techniques that rely on the knowledge of high-resolution land surface models. In this work, we explore several super-resolution techniques including an empirical dictionary method, a learned dictionary method, and a three-layer convolutional neural network. Using a year of global high-resolution land surface model simulations as training set, we found that we are able to produce high-resolution soil moisture maps that outperform the original low-resolution observations both qualitatively and quantitatively. In particular, on a patch-by-patch basis we are able to produce estimates of high-resolution soil moisture maps that improve on the original low-resolution patches by on average 6% in terms of mean-squared error, and 14% in terms of the structural similarity index.

  4. [Construction and optimization of ecological network for nature reserves in Fujian Province, China].

    PubMed

    Gu, Fan; Huang, Yi Xiong; Chen, Chuan Ming; Cheng, Dong Liang; Guo, Jia Lei

    2017-03-18

    The nature reserve is very important to biodiversity maintenance. However, due to the urbanization, the nature reserve has been fragmented with reduction in area, leading to the loss of species diversity. Establishing ecological network can effectively connect the fragmented habitats and plays an important role in species conversation. In this paper, based on deciding habitat patches and the landscape cost surface in ArcGIS, a minimum cumulative resistance model was used to simulate the potential ecological network of Fujian provincial nature reserves. The connectivity and importance of network were analyzed and evaluated based on comparison of connectivity indices (including the integral index of connectivity and probability of connectivity) and gravity model both before and after the potential ecological network construction. The optimum ecological network optimization measures were proposed. The result demonstrated that woodlands, grasslands and wetlands together made up the important part of the nature reserve ecological network. The habitats with large area had a higher degree of importance in the network. After constructing the network, the connectivity level was significantly improved. Although interaction strength between different patches va-ried greatly, the corridors between patches with large interaction were very important. The research could provide scientific reference and basis for nature protection and planning in Fujian Province.

  5. Self-bending of optical waveguides in a dry photosensitive medium

    NASA Astrophysics Data System (ADS)

    Malallah, Ra'ed; Wan, Min; Muniraj, Inbarasan; Cassidy, Derek; Sheridan, John T.

    2018-03-01

    Optical waveguide trajectories formed in an AA/PVA a photopolymer material photosensitive at 532 nm are examined. The transmission of light by this materials is discussed. The bending and arching of the waveguides which occur are investigated. The prediction of our model are shown to agree with the observed of trajectories. The largest index changes taking place at any time during the exposure, i.e. during SWW formation are found at the positions where the largest light intensity is present. Typically, such as maxima exist close to the input face at the location of the Primary Eye or at the location of the Secondary Eyes deeper with in the material. All photosensitive materials have a maximum saturation value of refractive index change that it is possible to induce, which is also discussed.

  6. The potential of small-Unmanned Aircraft Systems for the rapid detection of threatened unimproved grassland communities using an Enhanced Normalized Difference Vegetation Index.

    PubMed

    Strong, Conor J; Burnside, Niall G; Llewellyn, Dan

    2017-01-01

    The loss of unimproved grassland has led to species decline in a wide range of taxonomic groups. Agricultural intensification has resulted in fragmented patches of remnant grassland habitat both across Europe and internationally. The monitoring of remnant patches of this habitat is critically important, however, traditional surveying of large, remote landscapes is a notoriously costly and difficult task. The emergence of small-Unmanned Aircraft Systems (sUAS) equipped with low-cost multi-spectral cameras offer an alternative to traditional grassland survey methods, and have the potential to progress and innovate the monitoring and future conservation of this habitat globally. The aim of this article is to investigate the potential of sUAS for rapid detection of threatened unimproved grassland and to test the use of an Enhanced Normalized Difference Vegetation Index (ENDVI). A sUAS aerial survey is undertaken at a site nationally recognised as an important location for fragmented unimproved mesotrophic grassland, within the south east of England, UK. A multispectral camera is used to capture imagery in the visible and near-infrared spectrums, and the ENDVI calculated and its discrimination performance compared to a range of more traditional vegetation indices. In order to validate the results of analysis, ground quadrat surveys were carried out to determine the grassland communities present. Quadrat surveys identified three community types within the site; unimproved grassland, improved grassland and rush pasture. All six vegetation indices tested were able to distinguish between the broad habitat types of grassland and rush pasture; whilst only three could differentiate vegetation at a community level. The Enhanced Normalized Difference Vegetation Index (ENDVI) was the most effective index when differentiating grasslands at the community level. The mechanisms behind the improved performance of the ENDVI are discussed and recommendations are made for areas of future research and study.

  7. The potential of small-Unmanned Aircraft Systems for the rapid detection of threatened unimproved grassland communities using an Enhanced Normalized Difference Vegetation Index

    PubMed Central

    Strong, Conor J.; Llewellyn, Dan

    2017-01-01

    The loss of unimproved grassland has led to species decline in a wide range of taxonomic groups. Agricultural intensification has resulted in fragmented patches of remnant grassland habitat both across Europe and internationally. The monitoring of remnant patches of this habitat is critically important, however, traditional surveying of large, remote landscapes is a notoriously costly and difficult task. The emergence of small-Unmanned Aircraft Systems (sUAS) equipped with low-cost multi-spectral cameras offer an alternative to traditional grassland survey methods, and have the potential to progress and innovate the monitoring and future conservation of this habitat globally. The aim of this article is to investigate the potential of sUAS for rapid detection of threatened unimproved grassland and to test the use of an Enhanced Normalized Difference Vegetation Index (ENDVI). A sUAS aerial survey is undertaken at a site nationally recognised as an important location for fragmented unimproved mesotrophic grassland, within the south east of England, UK. A multispectral camera is used to capture imagery in the visible and near-infrared spectrums, and the ENDVI calculated and its discrimination performance compared to a range of more traditional vegetation indices. In order to validate the results of analysis, ground quadrat surveys were carried out to determine the grassland communities present. Quadrat surveys identified three community types within the site; unimproved grassland, improved grassland and rush pasture. All six vegetation indices tested were able to distinguish between the broad habitat types of grassland and rush pasture; whilst only three could differentiate vegetation at a community level. The Enhanced Normalized Difference Vegetation Index (ENDVI) was the most effective index when differentiating grasslands at the community level. The mechanisms behind the improved performance of the ENDVI are discussed and recommendations are made for areas of future research and study. PMID:29023504

  8. The development of comparative bias index

    NASA Astrophysics Data System (ADS)

    Aimran, Ahmad Nazim; Ahmad, Sabri; Afthanorhan, Asyraf; Awang, Zainudin

    2017-08-01

    Structural Equation Modeling (SEM) is a second generation statistical analysis techniques developed for analyzing the inter-relationships among multiple variables in a model simultaneously. There are two most common used methods in SEM namely Covariance-Based Structural Equation Modeling (CB-SEM) and Partial Least Square Path Modeling (PLS-PM). There have been continuous debates among researchers in the use of PLS-PM over CB-SEM. While there is few studies were conducted to test the performance of CB-SEM and PLS-PM bias in estimating simulation data. This study intends to patch this problem by a) developing the Comparative Bias Index and b) testing the performance of CB-SEM and PLS-PM using developed index. Based on balanced experimental design, two multivariate normal simulation data with of distinct specifications of size 50, 100, 200 and 500 are generated and analyzed using CB-SEM and PLS-PM.

  9. Anterior Leaflet Augmentation With CorMatrix Porcine Extracellular Matrix in Twenty-Five Patients: Unexpected Patch Failures and Histologic Analysis.

    PubMed

    Kelley, Thomas M; Kashem, Mohammed; Wang, He; McCarthy, James; Carroll, Nels D; Moser, G William; Guy, T Sloane

    2017-01-01

    This study reported on the treatment of Carpentier type IIIa and type IIIb mitral regurgitation (MR) with a large patch anterior mitral valve leaflet augmentation technique using CorMatrix (CorMatrix Cardiovascular Inc, Alpharetta, GA) extracellular matrix (ECM). A single-site chart review was conducted on patients who underwent anterior leaflet augmentation performed with the Da Vinci surgical robot (Intuitive Surgical, Sunnyvale, CA) or through a median sternotomy. Only patients who had anterior leaflet augmentation with porcine intestine ECM or autologous pericardium were included. Follow-up echocardiography was performed on all patients. Histologic specimens were available on ECM patches from a subset of patients who required reoperation. Between August 2011 and April 2014, 44 patients (mean age, 62.6 ± 12.2 years) underwent anterior leaflet augmentation with either porcine intestinal ECM or autologous pericardium at the Temple University Hospital in Philadelphia. Two (4%) late deaths occurred, one in each group. One patient who underwent ECM augmentation died of non-cardiac-related causes 7 months after discharge as a result of complications of chronic renal failure. The second late death occurred 5 months after discharge because of complications of a stroke in a patient in the pericardial augmentation group. Eight (32%) of the patients with ECM had recurrence of severe MR on echocardiography at an average time of 201 ± 98 days. Seven (28%) patients required reoperation because of failure of the ECM patch including perforation (4%), excessive patch dilation (20%), and suture line dehiscence (4%). In contrast, none of the patients with pericardial augmentation developed severe MR or required operation. Statistical analysis of the patients with ECM augmentation demonstrated no correlation of the following: age; sex; comorbid conditions such as diabetes, chronic obstructive pulmonary disease, and hypertension; left ventricular ejection fraction; surgical approach; annuloplasty size; or type of MR with patch failure. A lower body mass index was the only factor associated with recurrent severe regurgitation on univariate analysis (p = 0.039). Histologic study of the four available explants demonstrated intense inflammation without evidence of host integration. The remaining 15 (60%) patients had normal mitral leaflet structure and function on follow-up echocardiograms out to 12 months. For type III MR, a large anterior leaflet patch technique with porcine ECM was associated with a 32% recurrence rate of severe MR related directly to patch failure. Further research and development should be performed on the use of ECM materials with a goal to decrease the failure rate experienced in this study. Copyright © 2017 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.

  10. Modeling biogeochemical responses of vegetation to ENSO: comparison and analysis on subgrid PFT patches

    NASA Astrophysics Data System (ADS)

    Xu, M.; Hoffman, F. M.

    2016-12-01

    The El Niño Southern Oscillation (ENSO) is an important interannual climate variability and has significant consequences and impacts on the global biosphere. The responses of vegetation to ENSO are highly heterogeneous and generally depend on the biophysical and biochemical characteristics associated with model plant functional types (PFTs). The modeled biogeochemical variables from Earth System Models (ESMs) are generally grid averages consisting of several PFTs within a gridcell, which will lead to difficulties in directly comparing them with site observations and large uncertainties in studying their responses to large scale climate variability. In this study, we conducted a transient ENSO simulation for the previoustwo decades from 1995 to 2020 using the DOE ACME v0.3 model. It has a comprehensive terrestrial biogeochemistry model that is fully coupled with a sophisticated atmospheric model with an advanced spectral element dynamical core. The model was driven by the NOAA optimum interpolation sea surface temperature (SST) for contemporary years and CFS v2 nine-month seasonal predicted and reconstructed SST for future years till to 2020. We saved the key biogeochemical variables in the subgrid PFT patches and compared them with site observations directly. Furthermore, we studied the biogeochemical responses of terrestrial vegetation to two largest ENSO events (1997-1998 and 2015-2016) for different PFTs. Our results show that it is useful and meaningful to compare and analyze model simulations in subgrid patches. The comparison and analysis not only gave us the details of responses of terrestrial ecosystem to global climate variability under changing climate, but also the insightful view on the model performance on the PFT level.

  11. Effects of nutrient patches and root systems on the clonal plasticity of a rhizomatous grass

    USGS Publications Warehouse

    Huber-Sannwald, Elisabeth; Pyke, David A.; Caldwell, M.M.; Durham, S.

    1998-01-01

    Clonal plant foraging has been examined primarily on individual clones exposed to resource-poor and resource-rich environments. We designed an experiment to examine the clonal foraging behavior of the rhizomatous grass Elymus lanceolatus ssp. lanceolatus under the influence of neighboring plant root systems in a heterogeneous nutrient environment. Individual Elymus clones were planted in large bins together with one of three neighboring grass species, Agropyron desertorum, Pseudoroegneria spicata, or Bromus tectorum, which differ in rooting density and growth activity. The position of Elymus clones was manipulated so rhizomes encountered a short-duration nutrient patch and subsequently root systems of the neighboring plants. Unexpectedly, the morphological plasticity of the perennial grass Elymus lanceolatus ssp. lanceolatus was influenced by the presence of the neighboring species much more than by the local nutrient enrichments, although nutrient patches did amplify some of the foraging responses. Elymus rhizomes branched readily and initiated large daughter plants as they encountered the low-density root systems of Pseudoroegneria. When Elymus encountered the fine, dense root systems of the annual Bromus, clonal expansion was initially reduced. Yet, after the short growing season of Bromus, Elymus resumed clonal expansion and produced several daughter plants. Elymus clones were most constrained by the fine, dense root systems of Agropyron desertorum. In this case, a few, long rhizomes avoided the densely rooted soil environment by growing aboveground as stolons crossing over the Agropyron tussocks. Elymus clonal biomass was largest in neighborhoods of Pseudoroegneria, intermediate in neighborhoods with Bromus, and smallest in neighborhoods with Agropyron. The latter were approximately half the size of those in the Pseudoroegneria environments. Elymus growth could not be explained by simple resource competition alone; other mechanisms must have been involved in the apparent differences in interference patterns of neighboring plants with Elymus.

  12. Collective decision making and social interaction rules in mixed-species flocks of songbirds

    PubMed Central

    Farine, Damien R.; Aplin, Lucy M.; Garroway, Colin J.; Mann, Richard P.; Sheldon, Ben C.

    2014-01-01

    Associations in mixed-species foraging groups are common in animals, yet have rarely been explored in the context of collective behaviour. Despite many investigations into the social and ecological conditions under which individuals should form groups, we still know little about the specific behavioural rules that individuals adopt in these contexts, or whether these can be generalized to heterospecifics. Here, we studied collective behaviour in flocks in a community of five species of woodland passerine birds. We adopted an automated data collection protocol, involving visits by RFID-tagged birds to feeding stations equipped with antennae, over two winters, recording 91 576 feeding events by 1904 individuals. We demonstrated highly synchronized feeding behaviour within patches, with birds moving towards areas of the patch with the largest proportion of the flock. Using a model of collective decision making, we then explored the underlying decision rule birds may be using when foraging in mixed-species flocks. The model tested whether birds used a different decision rule for conspecifics and heterospecifics, and whether the rules used by individuals of different species varied. We found that species differed in their response to the distribution of conspecifics and heterospecifics across foraging patches. However, simulating decisions using the different rules, which reproduced our data well, suggested that the outcome of using different decision rules by each species resulted in qualitatively similar overall patterns of movement. It is possible that the decision rules each species uses may be adjusted to variation in mean species abundance in order for individuals to maintain the same overall flock-level response. This is likely to be important for maintaining coordinated behaviour across species, and to result in quick and adaptive flock responses to food resources that are patchily distributed in space and time. PMID:25214653

  13. Block-induced Complex Structures Building the Flare-productive Solar Active Region 12673

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yang, Shuhong; Zhang, Jun; Zhu, Xiaoshuai

    Solar active region (AR) 12673 produced 4 X-class, 27 M-class, and numerous lower-class flares during its passage across the visible solar disk in 2017 September. Our study is to answer the questions why this AR was so flare-productive and how the X9.3 flare, the largest one of the past decade, took place. We find that there was a sunspot in the initial several days, and then two bipolar regions emerged nearby it successively. Due to the standing of the pre-existing sunspot, the movement of the bipoles was blocked, while the pre-existing sunspot maintained its quasi-circular shaped umbra only with themore » disappearance of a part of penumbra. Thus, the bipolar patches were significantly distorted, and the opposite polarities formed two semi-circular shaped structures. After that, two sequences of new bipolar regions emerged within the narrow semi-circular zone, and the bipolar patches separated along the curved channel. The new bipoles sheared and interacted with the previous ones, forming a complex topological system, during which numerous flares occurred. At the highly sheared region, a great deal of free energy was accumulated. On September 6, one negative patch near the polarity inversion line began to rapidly rotate and shear with the surrounding positive fields, and consequently the X9.3 flare erupted. Our results reveal that the block-induced complex structures built the flare-productive AR and the X9.3 flare was triggered by an erupting filament due to the kink instability. To better illustrate this process, a block-induced eruption model is proposed for the first time.« less

  14. Greenhouse Gas Emission from Beef Cattle Grazing Systems on Temperate Grasslands

    NASA Astrophysics Data System (ADS)

    Rice, C. W.; Rivera-Zayas, J.

    2017-12-01

    At a global scale, cattle production is responsible for 65% of GHG emissions. During 2014 cattle management was the largest emitters of methane (CH4) representing a 23.2% of the total CH4 from anthropogenic activities. Since 2014, gas samples have been gathered and analyzed for carbon dioxide (CO2), CH4 and nitrous oxide (N2O) from three grazing areas under three different burning regimes at the temperate grassland of Konza Prairie Biological Station in Kansas. Burning regimes included one site in annually burned, and two sites with patch burned every three years on offset years. Burning regimes showed no effect in N2O emissions (p<0.05). Annual burning lowered CO2 emissions relative to patch burned. There was a significant effect of interaction between emissions and season. Maximum CO2 and CH4 fluxes were gathered during summer and fall; which coincided with high biomass seasons. Weather and edaphological conditions during fall and winter increase N2O emissions. A decrease in CO2 and CH4 fluxes, and N2O and CH4 soil uptake occurred during winter. Data gathered since 2014 implies CH4 and N2O are consumed on grazed grassland soils; with an increase in consumption with patch burning. Results quantify the role of temperate grasslands as a sink of CH4, and a possible sink of N2O. This experiment evidence CO2, CH4 and N2O emissions behavior as a consequence of burning regimes, and quantify the role of temperate grasslands as a sink of CH4 and N2O in order to understand best practice for resilience of beef cattle management.

  15. Rupture processes of the 2012 September 5 Mw 7.6 Nicoya, Costa Rica earthquake constrained by improved geodetic and seismological observations

    NASA Astrophysics Data System (ADS)

    Liu, Chengli; Zheng, Yong; Xiong, Xiong; Wang, Rongjiang; López, Allan; Li, Jun

    2015-10-01

    On 2012 September 5, the anticipated interplate thrust earthquake ruptured beneath the Nicoya peninsula in northwestern Costa Rica close to the Middle America trench, with a magnitude Mw 7.6. Extensive co-seismic observations were provided by dense near-field strong ground motion, Global Positioning Systems (GPS) networks and teleseismic recordings from global seismic networks. The wealthy data sets available for the 2012 Mw 7.6 Nicoya earthquake provide a unique opportunity to investigate the details of the rupture process of this earthquake. By implementing a non-linear joint inversion with high-rate GPS waveform, more static GPS offsets, strong-motion data and teleseismic body waveform, we obtained a robust and accurate rupture model of the 2012 Mw 7.6 Nicoya earthquake. The earthquake is dominantly a pure thrust component with a maximum slip of 3.5 m, and the main large slip patch is located below the hypocentre, spanning ˜50 km along dip and ˜110 km along strike. The static stress drop is about 3.4 MPa. The total seismic moment of our preferred model is 3.46 × 1020 N m, which gives Mw = 7.6. Due to the fast rupture velocity, most of the seismic moment was released within 70 s. The largest slip patch directly overlaps the interseismic locked region identified by geodetic observations and extends downdip to the intersection with the upper plate Moho. We also find that there is a complementary pattern between the distribution of aftershocks and the co-seismic rupture; most aftershocks locate in the crust of the upper plate and are possibly induced by the stress change caused by the large slip patch.

  16. Braided river flow and invasive vegetation dynamics in the Southern Alps, New Zealand.

    PubMed

    Caruso, Brian S; Edmondson, Laura; Pithie, Callum

    2013-07-01

    In mountain braided rivers, extreme flow variability, floods and high flow pulses are fundamental elements of natural flow regimes and drivers of floodplain processes, understanding of which is essential for management and restoration. This study evaluated flow dynamics and invasive vegetation characteristics and changes in the Ahuriri River, a free-flowing braided, gravel-bed river in the Southern Alps of New Zealand's South Island. Sixty-seven flow metrics based on indicators of hydrologic alteration and environmental flow components (extreme low flows, low flows, high flow pulses, small floods and large floods) were analyzed using a 48-year flow record. Changes in the areal cover of floodplain and invasive vegetation classes and patch characteristics over 20 years (1991-2011) were quantified using five sets of aerial photographs, and the correlation between flow metrics and cover changes were evaluated. The river exhibits considerable hydrologic variability characteristic of mountain braided rivers, with large variation in floods and other flow regime metrics. The flow regime, including flood and high flow pulses, has variable effects on floodplain invasive vegetation, and creates dynamic patch mosaics that demonstrate the concepts of a shifting mosaic steady state and biogeomorphic succession. As much as 25 % of the vegetation cover was removed by the largest flood on record (570 m(3)/s, ~50-year return period), with preferential removal of lupin and less removal of willow. However, most of the vegetation regenerated and spread relatively quickly after floods. Some flow metrics analyzed were highly correlated with vegetation cover, and key metrics included the peak magnitude of the largest flood, flood frequency, and time since the last flood in the interval between photos. These metrics provided a simple multiple regression model of invasive vegetation cover in the aerial photos evaluated. Our analysis of relationships among flow regimes and invasive vegetation cover has implications for braided rivers impacted by hydroelectric power production, where increases in invasive vegetation cover are typically greater than in unimpacted rivers.

  17. Seed harvesting by a generalist consumer is context-dependent: Interactive effects across multiple spatial scales

    USGS Publications Warehouse

    Ostoja, Steven M.; Schupp, Eugene W.; Klinger, Rob

    2013-01-01

    Granivore foraging decisions affect consumer success and determine the quantity and spatial pattern of seed survival. These decisions are influenced by environmental variation at spatial scales ranging from landscapes to local foraging patches. In a field experiment, the effects of seed patch variation across three spatial scales on seed removal by western harvester ants Pogonomyrmex occidentalis were evaluated. At the largest scale we assessed harvesting in different plant communities, at the intermediate scale we assessed harvesting at different distances from ant mounds, and at the smallest scale we assessed the effects of interactions among seed species in local seed neighborhoods on seed harvesting (i.e. resource–consumer interface). Selected seed species were presented alone (monospecific treatment) and in mixture with Bromus tectorum (cheatgrass; mixture treatment) at four distances from P. occidentalis mounds in adjacent intact sagebrush and non-native cheatgrass-dominated communities in the Great Basin, Utah, USA. Seed species differed in harvest, with B. tectorum being least preferred. Large and intermediate scale variation influenced harvest. More seeds were harvested in sagebrush than in cheatgrass-dominated communities (largest scale), and the quantity of seed harvested varied with distance from mounds (intermediate-scale), although the form of the distance effect differed between plant communities. At the smallest scale, seed neighborhood affected harvest, but the patterns differed among seed species considered. Ants harvested fewer seeds from mixed-seed neighborhoods than from monospecific neighborhoods, suggesting context dependence and potential associational resistance. Further, the effects of plant community and distance from mound on seed harvest in mixtures differed from their effects in monospecific treatments. Beyond the local seed neighborhood, selection of seed resources is better understood by simultaneously evaluating removal at multiple scales. Associational effects provide a useful theoretical basis for better understanding harvester ant foraging decisions. These results demonstrate the importance of ecological context for seed removal, which has implications for seed pools, plant populations and communities.

  18. [Impacts of urban cooling effect based on landscape scale: a review].

    PubMed

    Yu, Zhao-wu; Guo, Qing-hai; Sun, Ran-hao

    2015-02-01

    The urban cooling island (UCI) effect is put forward in comparison with the urban heat island effect, and emphasizes on landscape planning for optimization of function and way of urban thermal environment. In this paper, we summarized current research of the UCI effects of waters, green space, and urban park from the perspective of patch area, landscape index, threshold value, landscape pattern and correlation analyses. Great controversy was found on which of the two factors patch area and shape index has a more significant impact, the quantification of UCI threshold is particularly lacking, and attention was paid too much on the UCI effect of landscape composition but little on that of landscape configuration. More attention should be paid on shape, width and location for water landscape, and on the type of green space, green area, configuration and management for green space landscape. The altitude of urban park and human activities could also influence UCI effect. In the future, the threshold determination should dominate the research of UCI effect, the reasons of controversy should be further explored, the study of time sequence should be strengthened, the UCI effects from landscape pattern and landscape configuration should be identified, and more attention should be paid to spatial scale and resolution for the precision and accuracy of the UCI results. Also, synthesizing the multidisciplinary research should be taken into consideration.

  19. Integrated approach in the assessment of skin compatibility of cosmetic formulations with green coffee oil.

    PubMed

    Wagemaker, T A L; Rijo, P; Rodrigues, L M; Maia Campos, P M B G; Fernandes, A S; Rosado, C

    2015-10-01

    Green coffee oil (GCO) has been used in cosmetic formulations due to its emollient and anti-ageing properties. However, there are insufficient studies about its safety when applied in cosmetic formulations. Cytotoxicity of GCO and of formulations containing 2.5-15% of GCO was evaluated by the MTT reduction assay, in human keratinocytes. Formulations containing 15% of GCO and the vehicle were applied under in use conditions in the volar forearm of human volunteers during 3 days. Transepidermal water loss, stratum corneum water content and erythema index were evaluated each 24 h using biophysical techniques. The same formulations were probed for skin tolerance through a patch test. Neither pure GCO nor its formulations showed cytotoxic effects in concentrations up to 100 μg mL(-1) . Transepidermal water loss values showed a slight reduction when the formulation containing GCO was applied. Stratum corneum water content and erythema index did not show significant differences, as the results observed in the first day of the study were maintained throughout 3 days. None of the volunteers display any reaction after using an occlusive patch. The results obtained in the study indicate that GCO seems to be safe for topical applications and showed good skin compatibility under the experimental conditions of the study. © 2015 Society of Cosmetic Scientists and the Société Française de Cosmétologie.

  20. Effects of Rotigotine on REM Sleep Behavior Disorder in Parkinson Disease.

    PubMed

    Wang, Yan; Yang, Yuechang; Wu, Huijuan; Lan, Danmei; Chen, Ying; Zhao, Zhongxin

    2016-10-15

    REM sleep behavior disorder (RBD) is a common manifestation of Parkinson disease (PD). In this study, we assessed the effects of rotigotine transdermal patch on RBD features in patients with PD. In this prospective open-label study, eleven PD patients with untreated RBD were administered rotigotine patches for up to seven months to ameliorate their parkinsonism. The severities of their RBD symptoms before and after rotigotine therapy were evaluated through patient and bed partner interviews, a validated evaluation scale (REM sleep behavior disorder questionnaire-Hong Kong, RBDQ-HK), and blinded assessments based on video-polysomnographic (VPSG) measure. Rotigotine improved parkinsonism and subjective sleep quality in PD patients with RBD. The RBDQ-HK total score, especially the Factor 2 score, was decreased, which demonstrated that the subjective severity of RBD symptoms was improved after rotigotine treatment, especially the frequency and severity of abnormal RBD-related motor behaviors. The VPSG analyses showed that the total sleep time (TST) and stage 1% were increased and that the PLMS index was decreased. However, no differences in the RBD-related sleep measures were observed. The improved RBD symptoms and VPSG measures of PD patients in this study (TST, stage 1%, and PLMS index) suggest that, in PD, rotigotine may partially improve RBD-related symptoms. Rotigotine should be considered to be an optional drug for the treatment of RBD symptoms in PD. © 2016 American Academy of Sleep Medicine

  1. Cross-reactivity among epoxy acrylates and bisphenol F epoxy resins in patients with bisphenol A epoxy resin sensitivity.

    PubMed

    Lee, Han N; Pokorny, Christopher D; Law, Sandra; Pratt, Melanie; Sasseville, Denis; Storrs, Frances J

    2002-09-01

    The study's objective was 2-fold: first, to evaluate the potential cross-reactivity between Bis-A epoxy resins and epoxy acrylates and second, to study the cross reactivity between Bis-A epoxy resins and newer Bis-F epoxy resins in patients with allergic contact dermatitis to epoxy resins and had positive patch test to the standard epoxy resin based on bisphenol A. Forty-one patients were patch tested to 23 chemicals including epoxy acrylates, Bis-A epoxy resins, and Bis-F epoxy resins, as well as reactive diluents and nonbisphenol epoxy resins. Questions concerning exposure to epoxy resins, occupational history, and problems with dental work were completed. All patients included in the study had positive reactions to the standard Bis-A epoxy resin. Twenty percent (8 of 41) of the patients reacted to at least one of the epoxy acrylates; the most common reaction was to Bis-GMA. Five of 8 patients who reacted to the epoxy acrylates had dental work, but only one patient had problems from her dental work. Six of 8 patients (75%) who reacted to epoxy resins and epoxy acrylates did not react to aliphatic acrylates. Thirty-two percent (13 of 41) reacted to tosylamide epoxy resin, and none reacted to triglycidyl isocyanurate resin. In addition, all patients (100%) had positive reactions to at least one of the Bis-F epoxy resins that were tested. Most patients with sensitivity to Bis-A epoxy resins do not cross-react with epoxy acrylates. Patients with positive patch test reactions to epoxy acrylates used in dentistry usually do not have symptoms from their dental work. To our knowledge, this is the largest series of patients with sensitivity to the standard Bis-A epoxy resin that have been patch tested with the more recently introduced Bis-F epoxy resins. There is significant cross-reactivity between Bis-A and Bis-F epoxy resins, which can be explained by their structural similarity. Copyright 2002, Elsevier Science (USA). All rights reserved.

  2. Understanding how the shape and spatial distribution of ULVZs provides insight into their cause and to the nature of global-scale mantle convection

    NASA Astrophysics Data System (ADS)

    McNamara, Allen; Li, Mingming; Garnero, Ed; Marin, Nicole

    2017-04-01

    Seismic observations of the lower mantle infer multiple scales of compositional heterogeneity. The largest-scale heterogeneity, observed in seismic tomography models, is in the form of large, nearly antipodal regions referred to as the Large Low Shear Velocity Provinces (LLSVPs). In contrast, diffracted wave and core-reflection precursor seismic studies reveal small-scale Ultra Low Velocity Zones (ULVZs) at the base of the mantle that are almost two orders of magnitude smaller than the LLSVPs. We hypothesize that ULVZs provide insight into the nature of LLSVPs, and the LLSVPs, in turn, provide clues to the nature of global-scale mantle convection and compositional state. However, both LLSVPs and ULVZs are observations, and it remains unclear what is causing them. Here, we examine several related questions to aid in understanding their cause and the dynamical processes associated with them. Can we use seismic observations of ULVZ locations to differentiate whether they are caused by compositional heterogeneity or simply partial melting in otherwise normal mantle? Can we use the map-view shape of ULVZs to tell us about lowermost mantle flow directions and the temporal stability of these flow directions? Can the cross-sectional morphology of ULVZs tell us something about the viscosity difference between LLSVPs and background mantle? We performed geodynamical experiments to help answer these questions. We find that ULVZs caused by compositional heterogeneity preferentially form patch-like shapes along the margins of LLSVPs. Rounded patches indicate regions with long-lived stable mantle flow patterns, and linear patches indicate changing mantle flow patterns. Typically, these ULVZ patches have an asymmetrical cross-sectional shape; however, if LLSVPs have a larger grain-size than background mantle, their increased diffusion creep viscosity will act to make them more symmetrical. Alternatively, ULVZs caused simply by partial melting of normal mantle are preferentially located significantly inboard of LLSVP margins and have relatively symmetrical cross-sectional shapes. These results can prompt new seismic studies to better constrain the cause and dynamic significance of multi-scale compositional heterogeneity in the Earth's mantle.

  3. Placing Local Aggregations in a Larger-Scale Context: Hierarchical Modeling of Black-Footed Albatross Dispersion.

    PubMed

    Michael, P E; Jahncke, J; Hyrenbach, K D

    2016-01-01

    At-sea surveys facilitate the study of the distribution and abundance of marine birds along standardized transects, in relation to changes in the local environmental conditions and large-scale oceanographic forcing. We analyzed the form and the intensity of black-footed albatross (Phoebastria nigripes: BFAL) spatial dispersion off central California, using five years (2004-2008) of vessel-based surveys of seven replicated survey lines. We related BFAL patchiness to local, regional and basin-wide oceanographic variability using two complementary approaches: a hypothesis-based model and an exploratory analysis. The former tested the strength and sign of hypothesized BFAL responses to environmental variability, within a hierarchical atmosphere-ocean context. The latter explored BFAL cross-correlations with atmospheric / oceanographic variables. While albatross dispersion was not significantly explained by the hierarchical model, the exploratory analysis revealed that aggregations were influenced by static (latitude, depth) and dynamic (wind speed, upwelling) environmental variables. Moreover, the largest BFAL patches occurred along the survey lines with the highest densities, and in association with shallow banks. In turn, the highest BFAL densities occurred during periods of negative Pacific Decadal Oscillation index values and low atmospheric pressure. The exploratory analyses suggest that BFAL dispersion is influenced by basin-wide, regional-scale and local environmental variability. Furthermore, the hypothesis-based model highlights that BFAL do not respond to oceanographic variability in a hierarchical fashion. Instead, their distributions shift more strongly in response to large-scale ocean-atmosphere forcing. Thus, interpreting local changes in BFAL abundance and dispersion requires considering diverse environmental forcing operating at multiple scales.

  4. TARPs: Tracked Active Region Patches from SoHO/MDI

    NASA Astrophysics Data System (ADS)

    Turmon, M.; Hoeksema, J. T.; Bobra, M.

    2013-12-01

    We describe progress toward creating a retrospective MDI data product consisting of tracked magnetic features on the scale of solar active regions, abbreviated TARPs (Tracked Active Region Patches). The TARPs are being developed as a backward-looking extension (covering approximately 3500 regions spanning 1996-2010) to the HARP (HMI Active Region Patch) data product that has already been released for HMI (2010-present). Like the HARPs, the MDI TARP data set is designed to be a catalog of active regions (ARs), indexed by a region ID number, analogous to a NOAA AR number, and time. TARPs from MDI are computed based on the 96-minute synoptic magnetograms and pseudo-continuum intensitygrams. As with the related HARP data product, the approximate threshold for significance is 100G. Use of both image types together allows faculae and sunspots to be separated out as sub-classes of activity, in addition to identifying the overall active region that the faculae/sunspots are part of. After being identified in single images, the magnetically-active patches are grouped and tracked from image to image. Merges among growing active regions, as well as faint active regions hovering at the threshold of detection, are handled automatically. Regions are tracked from their inception until they decay within view, or transit off the visible disk. The final data product is indexed by a nominal AR number and time. For each active region and for each time, a bitmap image is stored containing the precise outline of the active region. Additionaly, metadata such as areas and integrated fluxes are stored for each AR and for each time. Because there is a calibration between the HMI and MDI magnetograms (Liu, Hoeksema et al. 2012), it is straightforward to use the same classification and tracking rules for the HARPs (from HMI) and the MDI TARPs. We anticipate that this will allow a consistent catalog spanning both instruments. We envision several uses for the TARP data product, which will be available in the MDI resident archive (RA). The catalog, indexed by AR number and time, eases data subsetting, which is useful to focus computationally expensive studies on just the active parts of the Sun. The catalog will enable per-AR studies such as the relation between AR structure and energetic events like flares, in a way that can readily consider AR age and geometry. The TARP catalog, combined with the HARP catalog, could enable extended studies, such as solar irradiance, across cycles 23 and 24, and allow analyses that had been confined to just a handful of ARs to be extended to a larger set. A portion of this research was performed at the Jet Propulsion Laboratory, California Institute of Technology. All Rights Reserved. A tracked AR as described here (compare NOAA 10095). Center panel: selected appearances of the AR. Right and left panels: snapshots at times T1 and T2. At starred times, the AR contains multiple unconnected pieces.

  5. Combined hormonal contraceptive (CHC) use among obese women and contraceptive effectiveness: a systematic review.

    PubMed

    Dragoman, Monica V; Simmons, Katharine B; Paulen, Melissa E; Curtis, Kathryn M

    2017-02-01

    To evaluate from the literature whether combined hormonal contraception (CHC), including combined oral contraception pills (COCs), transdermal patch, vaginal ring or combined injectables, have different effectiveness or failure rates by body weight or body mass index (BMI). We searched PubMed and the Cochrane Library databases for all articles in all languages published between inception and February 2016, for evidence relevant to body weight or BMI, CHC use and contraceptive effectiveness. The quality of each individual study was assessed using the system for evaluating evidence developed by the United States Preventive Services Task Force. From 2874 articles, we identified 15 reports for inclusion, all of fair to poor quality. Fourteen studies measured the association of obesity status and contraceptive failure among COC users. Three fair quality and one poor quality study reported increased COC failure among a heterogeneous population of overweight and obese women compared with normal weight women, while eight fair quality and two poor quality studies did not find an association. Two fair quality studies reported on contraceptive transdermal patches. One pooled analysis described a higher proportion of pregnancies among women using the patch who weighed ≥90 kg; another secondary analysis suggested BMI>30 was associated with increased failure. No studies directly compared contraceptive effectiveness using the combined vaginal ring or combined injectable. Current available evidence addressing the risk of CHC failure in obese compared to normal weight women is limited to fair and poor quality studies. Studies of COCs show mixed results, though absolute differences in COC failure by body weight and BMI are small. Based on limited evidence, it appears that increasing body weight and BMI may contribute to decreasing contraceptive patch effectiveness. Copyright © 2017. Published by Elsevier Inc.

  6. Does reef architectural complexity influence resource availability for a large reef-dwelling invertebrate?

    NASA Astrophysics Data System (ADS)

    Lozano-Álvarez, Enrique; Luviano-Aparicio, Nelia; Negrete-Soto, Fernando; Barradas-Ortiz, Cecilia; Aguíñiga-García, Sergio; Morillo-Velarde, Piedad S.; Álvarez-Filip, Lorenzo; Briones-Fourzán, Patricia

    2017-10-01

    In coral reefs, loss of architectural complexity and its associated habitat degradation is expected to affect reef specialists in particular due to changes in resource availability. We explored whether these features could potentially affect populations of a large invertebrate, the spotted spiny lobster Panulirus guttatus, which is an obligate Caribbean coral reef-dweller with a limited home range. We selected two separate large coral reef patches in Puerto Morelos (Mexico) that differed significantly in structural complexity and level of degradation, as assessed via the rugosity index, habitat assessment score, and percent cover of various benthic components. On each reef, we estimated density of P. guttatus and sampled lobsters to analyze their stomach contents, three different condition indices, and stable isotopes (δ15N and δ13C) in muscle. Lobster density did not vary with reef, suggesting that available crevices in the less complex patch still provided adequate refuge to these lobsters. Lobsters consumed many food types, dominated by mollusks and crustaceans, but proportionally more crustaceans (herbivore crabs) in the less complex patch, which had more calcareous macroalgae and algal turf. Lobsters from both reefs had a similar condition (all three indices) and mean δ15N, suggesting a similar quality of diet between reefs related to their opportunistic feeding, but differed in mean δ13C values, reflecting the different carbon sources between reefs and providing indirect evidence of individuals of P. guttatus foraging exclusively over their home reef. Overall, we found no apparent effects of architectural complexity, at least to the degree observed in our less complex patch, on density, condition, or trophic level of P. guttatus.

  7. Pharmacokinetics, safety, and tolerability of rotigotine transdermal system in healthy Japanese and Caucasian subjects following multiple-dose administration.

    PubMed

    Cawello, Willi; Kim, Seong Ryul; Braun, Marina; Elshoff, Jan-Peer; Masahiro, Takeuchi; Ikeda, Junji; Funaki, Tomoo

    2016-08-01

    Rotigotine is a dopamine receptor agonist indicated for the treatment of Parkinson's disease and moderate-to-severe restless legs syndrome. Continuous transdermal delivery of rotigotine via a silicon-based patch maintains stable plasma concentrations over 24 h. The objective of the study was to evaluate the pharmacokinetics, safety, and tolerability of a multiple-dose schedule of rotigotine transdermal patch in Japanese and Caucasian subjects. In this open-label, repeated-dose, parallel-group study (ClinicalTrials.gov: NCT01854216), healthy male and female subjects of Japanese or Caucasian ethnic origin were matched by gender, body mass index, and age. Subjects underwent a 9-day patch application period. 12 Japanese and 12 Caucasian subjects were included in the pharmacokinetic analyses. Mean apparent doses (actual amount of drug delivered) increased proportionally with rotigotine nominal dosages (1, 2, and 4 mg/24 h) and were similar for both ethnic groups, with large inter-individual variability. Mean plasma concentration-time profiles for unconjugated rotigotine were similar in both ethnic groups at day 3 for each dosage. Peak concentrations (C max,ss) and area under the concentration-time curves from pre-dose to the concentration measured 24 h after administration of patch (AUC(0-24,ss)) showed similar exposure in both groups; higher values in Japanese subjects were explained by differences in body weight. For total rotigotine, C max,ss and AUC(0-24,ss) values were higher in Caucasian subjects and could be explained by small differences in apparent dose. Rotigotine was generally well tolerated following multiple applications up to 4 mg/24 h. These findings suggest similar dosage requirements for rotigotine transdermal system in Japanese and Caucasian populations.

  8. Evaluation of ERTS-1 data applications to geologic mapping, structural analysis and mineral resource inventory of South America with special emphasis on the Andes Mountain region

    NASA Technical Reports Server (NTRS)

    Carter, W. D. (Principal Investigator)

    1974-01-01

    The author has identified the following significant results. A color composite of image E1010-14035, dated 2 August 1972, covers the west central Bolivian Altiplano near Salar de Coipasa. It clearly shows the distribution of surface water and scant patches of vegetation. The Salar de Coipasa is the largest body of water in the area, about 130 sq km of dark blue fresh water. A lighter blue area south of the lake suggests a thin cover of highly saline water superposed on salt beds. The scattered vegetation patches are presumed to be native grasses, lichens, and possibly Indian potato and maiz areas. A detailed study has been made of the scene which provides 12 different interpretive overlays including geology, volcanology, soils, hydrology, and relative permeability. It was found that color composites provide at least 40% more information that do black and white renditions. An excellent example of change detection was provided by image E1244-14051, dated 24 March 1973. Water in the Salar de Coipasa had more than doubled as a result of the rains of the Bolivian winter, which generally occur in the February-March period. The Salars are excellent and highly sensitive moisture indicators in this highly arid region.

  9. DFT Study of the Oxygen Reduction Reaction Activity on Fe−N4-Patched Carbon Nanotubes: The Influence of the Diameter and Length

    PubMed Central

    Chen, Xin; Hu, Rui; Bai, Fan

    2017-01-01

    The influences of diameter and length of the Fe−N4-patched carbon nanotubes (Fe−N4/CNTs) on oxygen reduction reaction (ORR) activity were investigated by density functional theory method using the BLYP/DZP basis set. The results indicate that the stability of the Fe−N4 catalytic site in Fe−N4/CNTs will be enhanced with a larger tube diameter, but reduced with shorter tube length. A tube with too small a diameter makes a Fe−N4 site unstable in acid medium since Fe−N and C−N bonds must be significantly bent at smaller diameters due to hoop strain. The adsorption energy of the ORR intermediates, especially of the OH group, becomes weaker with the increase of the tube diameter. The OH adsorption energy of Fe−N4/CNT with the largest tube diameter is close to that on Pt(111) surface, indicating that its catalytic property is similar to Pt. Electronic structure analysis shows that the OH adsorption energy is mainly controlled by the energy levels of Fe 3d orbital. The calculation results uncover that Fe−N4/CNTs with larger tube diameters and shorter lengths will exhibit better ORR activity and stability. PMID:28772903

  10. Oracle Applications Patch Administration Tool (PAT) Beta Version

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    2002-01-04

    PAT is a Patch Administration Tool that provides analysis, tracking, and management of Oracle Application patches. This includes capabilities as outlined below: Patch Analysis & Management Tool Outline of capabilities: Administration Patch Data Maintenance -- track Oracle Application patches applied to what database instance & machine Patch Analysis capture text files (readme.txt and driver files) form comparison detail report comparison detail PL/SQL package comparison detail SQL scripts detail JSP module comparison detail Parse and load the current applptch.txt (10.7) or load patch data from Oracle Application database patch tables (11i) Display Analysis -- Compare patch to be applied with currentmore » Oracle Application installed Appl_top code versions Patch Detail Module comparison detail Analyze and display one Oracle Application module patch. Patch Management -- automatic queue and execution of patches Administration Parameter maintenance -- setting for directory structure of Oracle Application appl_top Validation data maintenance -- machine names and instances to patch Operation Patch Data Maintenance Schedule a patch (queue for later execution) Run a patch (queue for immediate execution) Review the patch logs Patch Management Reports« less

  11. The Great Tumaco, Colombia earthquake of 12 December 1979

    USGS Publications Warehouse

    Herd, D.G.; Youd, T.L.; Meyer, H.; Arango, C.J.L.; Person, W.J.; Mendoza, C.

    1981-01-01

    Southwestern Colombia and northern Ecuador were shaken by a shallow-focus earthquake on 12 December 1979. The magnitude 8 shock, located near Tumaco, Colombia, was the largest in northwestern South America since 1942 and had been forecast to fill a seismic gap. Thrust faulting occurred on a 280- by 130-kilometer rectangular patch of a subduction zone that dips east beneath the Pacific coast of Colombia. A 200-kilometer stretch of the coast tectonically subsided as much as 1.6 meters; uplift occurred offshore on the continental slope. A tsunami swept inland immediately after the earthquake. Ground shaking (intensity VI to IX) caused many buildings to collapse and generated liquefaction in sand fills and in Holocene beach, lagoonal, and fluvial deposits.

  12. Relation of Nickel Allergy with in-Stent Restenosis in Patients Treated with Cobalt Chromium Stents.

    PubMed

    Aliağaoğlu, Cihangir; Turan, Hakan; Erden, Ismail; Albayrak, Hülya; Ozhan, Hakan; Başar, Cengiz; Gürlevik, Zehra; Alçelik, Ayşegül

    2012-11-01

    In-stent restenosis (ISR) is the major limitation of percutaneous coronary stenting procedure. The elements like nickel, chromate and molybdenum are known to cause contact allergy. Hypersensitivity reaction, against these metal ions, may be one of the reasons of ISR. Cobalt chromium coronary stents, which are increasingly being used in percutaneous coronary interventions, have more nickel amount than the stainless steel stents. We aimed to investigate the association between nickel hypersensitivity reaction and ISR in patients treated with cobalt chromium coronary stents. Epicutaneous patch tests for nickel were applied to 31 patients who had undergone elective cobalt chromium coronary stent implantation and had ISR in control angiogram. Thirty patients, without ISR, were included as the control group. Patch test results and other clinical variables were compared. There was no statistically significant difference of the mean age, sex, body mass index, rate of hypercholesterolemia, diabetes, hypertension and smoking between the patients with and without ISR. All other lesion characteristics were similar in the 2 groups. According to the patch test results, 7 patients had nickel contact allergy. All of these patients were in the ISR group, which was statistically significant (p<0.006). Patients treated with cobalt chromium coronary stents and had ISR were found to have significantly more nickel allergy than the control group. Nickel allergy may play role in restenosis pathophysiology.

  13. Maintaining social cohesion is a more important determinant of patch residence time than maximizing food intake rate in a group-living primate, Japanese macaque (Macaca fuscata).

    PubMed

    Kazahari, Nobuko

    2014-04-01

    Animals have been assumed to employ an optimal foraging strategy (e.g., rate-maximizing strategy). In patchy food environments, intake rate within patches is positively correlated with patch quality, and declines as patches are depleted through consumption. This causes patch-leaving and determines patch residence time. In group-foraging situations, patch residence times are also affected by patch sharing. Optimal patch models for groups predict that patch residence times decrease as the number of co-feeding animals increases because of accelerated patch depletion. However, group members often depart patches without patch depletion, and their patch residence time deviates from patch models. It has been pointed out that patch residence time is also influenced by maintaining social proximity with others among group-living animals. In this study, the effects of maintaining social cohesion and that of rate-maximizing strategy on patch residence time were examined in Japanese macaques (Macaca fuscata). I hypothesized that foragers give up patches to remain in the proximity of their troop members. On the other hand, foragers may stay for a relatively long period when they do not have to abandon patches to follow the troop. In this study, intake rate and foraging effort (i.e., movement) did not change during patch residency. Macaques maintained their intake rate with only a little foraging effort. Therefore, the patches were assumed to be undepleted during patch residency. Further, patch residence time was affected by patch-leaving to maintain social proximity, but not by the intake rate. Macaques tended to stay in patches for short periods when they needed to give up patches for social proximity, and remained for long periods when they did not need to leave to keep social proximity. Patch-leaving and patch residence time that prioritize the maintenance of social cohesion may be a behavioral pattern in group-living primates.

  14. Large, high-intensity fire events in southern California shrublands: debunking the fine-grain age patch model.

    PubMed

    Keeley, Jon E; Zedler, Paul H

    2009-01-01

    We evaluate the fine-grain age patch model of fire regimes in southern California shrublands. Proponents contend that the historical condition was characterized by frequent small to moderate size, slow-moving smoldering fires, and that this regime has been disrupted by fire suppression activities that have caused unnatural fuel accumulation and anomalously large and catastrophic wildfires. A review of more than 100 19th-century newspaper reports reveals that large, high-intensity wildfires predate modern fire suppression policy, and extensive newspaper coverage plus first-hand accounts support the conclusion that the 1889 Santiago Canyon Fire was the largest fire in California history. Proponents of the fine-grain age patch model contend that even the very earliest 20th-century fires were the result of fire suppression disrupting natural fuel structure. We tested that hypothesis and found that, within the fire perimeters of two of the largest early fire events in 1919 and 1932, prior fire suppression activities were insufficient to have altered the natural fuel structure. Over the last 130 years there has been no significant change in the incidence of large fires greater than 10,000 ha, consistent with the conclusion that fire suppression activities are not the cause of these fire events. Eight megafires (> or = 50,000 ha) are recorded for the region, and half have occurred in the last five years. These burned through a mosaic of age classes, which raises doubts that accumulation of old age classes explains these events. Extreme drought is a plausible explanation for this recent rash of such events, and it is hypothesized that these are due to droughts that led to increased dead fine fuels that promoted the incidence of firebrands and spot fires. A major shortcoming of the fine-grain age patch model is that it requires age-dependent flammability of shrubland fuels, but seral stage chaparral is dominated by short-lived species that create a dense surface layer of fine fuels. Results from the Behave Plus fire model with a custom fuel module for young chaparral shows that there is sufficient dead fuel to spread fire even under relatively little winds. Empirical studies of fuel ages burned in recent fires illustrate that young fuels often comprise a major portion of burned vegetation, and there is no difference between evergreen chaparral and semi-deciduous sage scrub. It has also been argued that the present-day fire size distribution in northern Baja California is a model of the historical patterns that were present on southern California landscapes. Applying this model with historical fire frequencies shows that the Baja model is inadequate to maintain these fire-prone ecosystems and further demonstrates that fire managers in southern California are not likely to learn much from studying modern Baja California fire regimes. Further supporting this conclusion are theoretical cellular automata models of fire spread, which show that, even in systems with age dependent flammability, landscapes evolve toward a complex age mosaic with a plausible age structure only when there is a severe stopping rule that constrains fire size, and only if ignitions are saturating.

  15. Large, high-intensity fire events in Southern California shrublands: Debunking the fine-grain age patch model

    USGS Publications Warehouse

    Keeley, J.E.; Zedler, P.H.

    2009-01-01

    We evaluate the fine-grain age patch model of fire regimes in southern California shrublands. Proponents contend that the historical condition was characterized by frequent small to moderate size, slow-moving smoldering fires, and that this regime has been disrupted by fire suppression activities that have caused unnatural fuel accumulation and anomalously large and catastrophic wildfires. A review of more than 100 19th-century newspaper reports reveals that large, high-intensity wildfires predate modern fire suppression policy, and extensive newspaper coverage plus first-hand accounts support the conclusion that the 1889 Santiago Canyon Fire was the largest fire in California history. Proponents of the fine-grain age patch model contend that even the very earliest 20th-century fires were the result of fire suppression disrupting natural fuel structure. We tested that hypothesis and found that, within the fire perimeters of two of the largest early fire events in 1919 and 1932, prior fire suppression activities were insufficient to have altered the natural fuel structure. Over the last 130 years there has been no significant change in the incidence of large fires greater than 10000 ha, consistent with the conclusion that fire suppression activities are not the cause of these fire events. Eight megafires (???50 000 ha) are recorded for the region, and half have occurred in the last five years. These burned through a mosaic of age classes, which raises doubts that accumulation of old age classes explains these events. Extreme drought is a plausible explanation for this recent rash of such events, and it is hypothesized that these are due to droughts that led to increased dead fine fuels that promoted the incidence of firebrands and spot fires. A major shortcoming of the fine-grain age patch model is that it requires age-dependent flammability of shrubland fuels, but seral stage chaparral is dominated by short-lived species that create a dense surface layer of fine fuels. Results from the Behave Plus fire model with a custom fuel module for young chaparral shows that there is sufficient dead fuel to spread fire even under relatively little winds. Empirical studies of fuel ages burned in recent fires illustrate that young fuels often comprise a major portion of burned vegetation, and there is no difference between evergreen chaparral and semi-deciduous sage scrub. It has also been argued that the present-day fire size distribution in northern Baja California is a model of the historical patterns that were present on southern California landscapes. Applying this model with historical fire frequencies shows that the Baja model is inadequate to maintain these fire-prone ecosystems and further demonstrates that fire managers in southern California are not likely to learn much from studying modern Baja California fire regimes. Further supporting this conclusion are theoretical cellular automata models of fire spread, which show that, even in systems with age dependent flammability, landscapes evolve toward a complex age mosaic with a plausible age structure only when there is a severe stopping rule that constrains fire size, and only if ignitions are saturating. ?? 2009 by the Ecological Society of America.

  16. Relating Topological Determinants of Complex Networks to Their Spectral Properties: Structural and Dynamical Effects

    NASA Astrophysics Data System (ADS)

    Castellano, Claudio; Pastor-Satorras, Romualdo

    2017-10-01

    The largest eigenvalue of a network's adjacency matrix and its associated principal eigenvector are key elements for determining the topological structure and the properties of dynamical processes mediated by it. We present a physically grounded expression relating the value of the largest eigenvalue of a given network to the largest eigenvalue of two network subgraphs, considered as isolated: the hub with its immediate neighbors and the densely connected set of nodes with maximum K -core index. We validate this formula by showing that it predicts, with good accuracy, the largest eigenvalue of a large set of synthetic and real-world topologies. We also present evidence of the consequences of these findings for broad classes of dynamics taking place on the networks. As a by-product, we reveal that the spectral properties of heterogeneous networks built according to the linear preferential attachment model are qualitatively different from those of their static counterparts.

  17. An appraisal of the classic forest succession paradigm with the shade tolerance index.

    PubMed

    Lienard, Jean; Florescu, Ionut; Strigul, Nikolay

    2015-01-01

    In this paper we revisit the classic theory of forest succession that relates shade tolerance and species replacement and assess its validity to understand patch-mosaic patterns of forested ecosystems of the USA. We introduce a macroscopic parameter called the "shade tolerance index" and compare it to the classic continuum index in southern Wisconsin forests. We exemplify shade tolerance driven succession in White Pine-Eastern Hemlock forests using computer simulations and analyzing approximated chronosequence data from the USDA FIA forest inventory. We describe this parameter across the last 50 years in the ecoregions of mainland USA, and demonstrate that it does not correlate with the usual macroscopic characteristics of stand age, biomass, basal area, and biodiversity measures. We characterize the dynamics of shade tolerance index using transition matrices and delimit geographical areas based on the relevance of shade tolerance to explain forest succession. We conclude that shade tolerance driven succession is linked to climatic variables and can be considered as a primary driving factor of forest dynamics mostly in central-north and northeastern areas in the USA. Overall, the shade tolerance index constitutes a new quantitative approach that can be used to understand and predict succession of forested ecosystems and biogeographic patterns.

  18. Eye patches: Protein assembly of index-gradient squid lenses

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cai, J.; Townsend, J. P.; Dodson, T. C.

    A parabolic relationship between lens radius and refractive index allows spherical lenses to avoid spherical aberration. We show that in squid, patchy colloidal physics resulted from an evolutionary radiation of globular S-crystallin proteins. Small-angle x-ray scattering experiments on lens tissue show colloidal gels of S-crystallins at all radial positions. Sparse lens materials form via low-valence linkages between disordered loops protruding from the protein surface. The loops are polydisperse and bind via a set of hydrogen bonds between disordered side chains. Peripheral lens regions with low particle valence form stable, volume-spanning gels at low density, whereas central regions with higher averagemore » valence gel at higher densities. The proteins demonstrate an evolved set of linkers for self-assembly of nanoparticles into volumetric materials.« less

  19. Analyzing the effects of urban expansion on land surface temperature patterns by landscape metrics: a case study of Isfahan city, Iran.

    PubMed

    Madanian, Maliheh; Soffianian, Ali Reza; Koupai, Saeid Soltani; Pourmanafi, Saeid; Momeni, Mehdi

    2018-03-03

    Urban expansion can cause extensive changes in land use and land cover (LULC), leading to changes in temperature conditions. Land surface temperature (LST) is one of the key parameters that should be considered in the study of urban temperature conditions. The purpose of this study was, therefore, to investigate the effects of changes in LULC due to the expansion of the city of Isfahan on LST using landscape metrics. To this aim, two Landsat 5 and Landsat 8 images, which had been acquired, respectively, on August 2, 1985, and July 4, 2015, were used. The support vector machine method was then used to classify the images. The results showed that Isfahan city had been encountered with an increase of impervious surfaces; in fact, this class covered 15% of the total area in 1985, while this value had been increased to 30% in 2015. Then LST zoning maps were created, indicating that the bare land and impervious surfaces categories were dominant in high temperature zones, while in the zones where water was present or NDVI was high, LST was low. Then, the landscape metrics in each of the LST zones were analyzed in relation to the LULC changes, showing that LULC changes due to urban expansion changed such landscape properties as the percentage of landscape, patch density, large patch index, and aggregation index. This information could be beneficial for urban planners to monitor and manage changes in the LULC patterns.

  20. Consolidation and the transformation of competition in health insurance.

    PubMed

    Robinson, James C

    2004-01-01

    This paper presents data on fifty state and substate insurance markets, in terms of the 2003 relative shares of the largest health plans and the antitrust index of concentration. It presents 2000-03 data on rates of growth in premiums, costs, operating earnings, returns on equity, and share prices for the nation's largest health plans (Well-Point, Anthem, Aetna, and CIGNA). Private insurers face renewed price and profit pressures in the short term, but long-term prospects depend on the emergence of new products and new competitors in an increasingly consolidated industry.

  1. New contraceptive patch wearability assessed by investigators and participants in a randomized phase 3 study.

    PubMed

    Kaunitz, Andrew M; Portman, David; Westhoff, Carolyn L; Mishell, Daniel R; Archer, David F; Foegh, Marie

    2015-03-01

    To evaluate skin irritation and patch adhesiveness of a new weekly low-dose levonorgestrel (LNG) and ethinyl estradiol (EE) contraceptive patch (LNG/EE patch). This analysis was part of an open-label, parallel-group, multicenter, phase 3 study that randomized healthy women to the LNG/EE patch (one patch weekly for three consecutive weeks, followed by a patch-free week for 13 cycles) or to an oral contraceptive for six cycles followed by seven LNG/EE patch cycles. Participants selected patch application sites of abdomen, buttock or upper torso. Investigators rated patch adhesiveness and skin irritation using standardized scales. Participants rated skin irritation and itching daily using standardized scales and recorded patch fall-off on daily diary cards. A total of 32,508 patches were applied (n=1273). At the five clinic visits in which investigators rated the patches, they rated adhesiveness=0 (no lift) for ≥84% of participants and skin irritation=absent/mild for 97% of patches. Participants reported that 2-3.7% of patches fell off and rated skin irritation as absent or mild for 92- 95% of patches, according to site. Investigator- and participant-rated assessments of LNG/EE patch adhesiveness and irritation demonstrated a low incidence of patch detachment, skin irritation and pruritus. This secondary analysis of a phase 3 clinical trial of a new weekly low-dose LNG and EE contraceptive patch, which used assessment by both investigators and participants, observed a low incidence of skin irritation, pruritus and patch detachment. Copyright © 2015 Elsevier Inc. All rights reserved.

  2. Mating success of males with and without wing patch in Drosophila biarmipes.

    PubMed

    Hegde, S N; Chethan, B K; Krishna, M S

    2005-10-01

    Some males of D. biarmipes--synonym of D. rajasekari and D. raychaudhuri have a black patch on the wing. The patch extends from the apical margin of wing to the third longitudinal vein. Field and laboratory studies have been carried out in D. biarmipes to study role of male's wing patch in mating success. The field study shows that nature favors D. biarmipes males with patch. Although males without patch mated, males with patch have higher mating success suggesting the role of wing patch during courtship. Further, among mating males, males with patch had longer wings than males without patch. During courtship, males with patch oriented and mated faster; performed courtship acts such as tapping, scissoring, vibration, licking and twist dance more times than males without patch in both competitive and non-competitive situations. The results indicate that there is a casual relationship between the presence of wing patch, mating speed and success. Also there is a correlation between presence of wing patch, size of the flies and mating success.

  3. Correlation and volatility in an Indian stock market: A random matrix approach

    NASA Astrophysics Data System (ADS)

    Kulkarni, Varsha; Deo, Nivedita

    2007-11-01

    We examine the volatility of an Indian stock market in terms of correlation of stocks and quantify the volatility using the random matrix approach. First we discuss trends observed in the pattern of stock prices in the Bombay Stock Exchange for the three-year period 2000 2002. Random matrix analysis is then applied to study the relationship between the coupling of stocks and volatility. The study uses daily returns of 70 stocks for successive time windows of length 85 days for the year 2001. We compare the properties of matrix C of correlations between price fluctuations in time regimes characterized by different volatilities. Our analyses reveal that (i) the largest (deviating) eigenvalue of C correlates highly with the volatility of the index, (ii) there is a shift in the distribution of the components of the eigenvector corresponding to the largest eigenvalue across regimes of different volatilities, (iii) the inverse participation ratio for this eigenvector anti-correlates significantly with the market fluctuations and finally, (iv) this eigenvector of C can be used to set up a Correlation Index, CI whose temporal evolution is significantly correlated with the volatility of the overall market index.

  4. A bibliometric analysis of occupational therapy publications.

    PubMed

    Brown, Ted; Gutman, Sharon A; Ho, Yuh-Shan; Fong, Kenneth N K

    2018-01-01

    Bibliometrics involves the statistical analysis of the publications in a specific discipline or subject area. A bibliometric analysis of the occupational therapy refereed literature is needed. A bibliometric analysis was completed of the occupational therapy literature from 1991-2014, indexed in the Science Citation Index-Expanded or the Social Sciences Citation Index. Publications were searched by title, abstract, keywords, and KeyWords Plus. Total number of article citations, citations per journal, and contributions per country, individual authors, and institution were calculated. 5,315 occupational therapy articles were published in 821 journals. It appears that there is a citation window of an approximate 10-year period between the time of publication and the peak number of citations an article receives. The top three most highly cited articles were published in Developmental Medicine and Child Neurology, JAMA, and Lancet. AJOT, BJOT and AOTJ published the largest number of occupational therapy articles with the United States, Australia, and Canada producing the highest number of publications. McMaster University, the University of Queensland, and the University of Toronto were the institutions that published the largest number of occupational therapy journal articles. The occupational therapy literature is growing and the frequency of article citation is increasing.

  5. Lake Eyre, Simpson Desert, South Australia, Australia

    NASA Image and Video Library

    1990-12-10

    STS035-501-007 (2-10 Dec. 1990) --- The STS-35 crewmembers aboard the Earth-orbiting Space Shuttle Columbia photographed this view of the Arid Simpson Desert of Australia with a handheld Rolleiflex camera. Lake Eyre is normally dry; however, the STS-35 crew was able to recognize water in the lowest parts of the lake (dark pink area) and possibly in Lake Blanche east of Lake Eyre. Lake Frome lies in the distance separated from Lake Torrens (top right) by dark hills of Flinders Range. The Finke River (bottom left to middle) flows into the Eyre basin from the northwest. Although it is the largest river entering the basin, Finke's floods seldom reach Lake Eyre. The dark brown patch in the foreground is an area of ancient, brown lateritic soils partly covered by dunes.

  6. Simple diffusion can support the pitchfork, the flip bifurcations, and the chaos

    NASA Astrophysics Data System (ADS)

    Meng, Lili; Li, Xinfu; Zhang, Guang

    2017-12-01

    In this paper, a discrete rational fration population model with the Dirichlet boundary conditions will be considered. According to the discrete maximum principle and the sub- and supper-solution method, the necessary and sufficient conditions of uniqueness and existence of positive steady state solutions will be obtained. In addition, the dynamical behavior of a special two patch metapopulation model is investigated by using the bifurcation method, the center manifold theory, the bifurcation diagrams and the largest Lyapunov exponent. The results show that there exist the pitchfork, the flip bifurcations, and the chaos. Clearly, these phenomena are caused by the simple diffusion. The theoretical analysis of chaos is very imortant, unfortunately, there is not any results in this hand. However, some open problems are given.

  7. Antarctic Peninsula and Weddell Sea

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Numerous icebergs are breaking out of the sea ice in the Southern Ocean surrounding the Antarctic Peninsula. This true-color MODIS image from November 13, 2001, shows several icebergs drifting out of the Weddell Sea. The Antarctic Peninsula (left) reaches out into the Drake Passage, which separates the southern tip of South America from Antarctica. Warmer temperatures have cleared a tiny patch of bare ground at the Peninsula's tip. The predominant ocean current in the area is the Antarctic Circumpolar Current ('circum' meaning 'around'), which is also the 'West Wind Drift.' The current is the largest permanent current in the world, and water is moved eastward by westerly winds. Icebergs leaving the Weddell Sea are likely to be moved north and east by the current. Credit: Jacques Descloitres, MODIS Land Rapid Response Team, NASA/GSFC

  8. Financial Reporting for the Defense Logistics Agency - General Funds at Defense Finance and Accounting Service Columbus

    DTIC Science & Technology

    2002-01-18

    the largest net abnormal balances, totaling $20.9 million (finding A). We audited the financial reporting procedures that Defense Finance and Accounting Service Columbus used to report on Treasury Index 97 funds.

  9. Earth Observations by the Expedition 19 crew

    NASA Image and Video Library

    2009-04-09

    ISS019-E-005989 (9 April 2009) --- Red River floods in North Dakota and Minnesota are featured in this image photographed by an Expedition 19 crewmember on the International Space Station. The Red River, which flows north between North Dakota and Minnesota, flooded for a second time on the day this image was taken (9 April 2009). Two weeks earlier the river had crested at very high levels. The new floodwaters in the Red River, and especially in the less well-drained meandering tributaries east of the river, appear as black shapes against a snowy agricultural landscape defined by rectangular fields. The largest irregular black patches are the flooded low parts of fields along a canalized western tributary of the Red River (right). The city-block patterns of Wahpeton ND and Breckenridge MN, opposite one another on the banks of the Red River, stand out as dark gray patches against the snow at image top left. The main runway of the Henry Stern Airport lies angled northwest directly south of Wahpeton, and its 1.3 kilometers runway length gives scale to the view. Access roads to the agricultural fields tend to follow an orthogonal pattern, while larger roads leading to the cities cut across this pattern (lower left, near Wahpeton). A subtle pattern of drainage ditches and plow lines appear as thin parallel lines throughout fields in the scene.

  10. Boundary effects on population dynamics in stochastic lattice Lotka-Volterra models

    NASA Astrophysics Data System (ADS)

    Heiba, Bassel; Chen, Sheng; Täuber, Uwe C.

    2018-02-01

    We investigate spatially inhomogeneous versions of the stochastic Lotka-Volterra model for predator-prey competition and coexistence by means of Monte Carlo simulations on a two-dimensional lattice with periodic boundary conditions. To study boundary effects for this paradigmatic population dynamics system, we employ a simulation domain split into two patches: Upon setting the predation rates at two distinct values, one half of the system resides in an absorbing state where only the prey survives, while the other half attains a stable coexistence state wherein both species remain active. At the domain boundary, we observe a marked enhancement of the predator population density. The predator correlation length displays a minimum at the boundary, before reaching its asymptotic constant value deep in the active region. The frequency of the population oscillations appears only very weakly affected by the existence of two distinct domains, in contrast to their attenuation rate, which assumes its largest value there. We also observe that boundary effects become less prominent as the system is successively divided into subdomains in a checkerboard pattern, with two different reaction rates assigned to neighboring patches. When the domain size becomes reduced to the scale of the correlation length, the mean population densities attain values that are very similar to those in a disordered system with randomly assigned reaction rates drawn from a bimodal distribution.

  11. Deforestation and fragmentation of natural forests in the upper Changhua watershed, Hainan, China: implications for biodiversity conservation.

    PubMed

    Zhai, De-Li; Cannon, Charles H; Dai, Zhi-Cong; Zhang, Cui-Ping; Xu, Jian-Chu

    2015-01-01

    Hainan, the largest tropical island in China, belongs to the Indo-Burma biodiversity hotspot. The Changhua watershed is a center of endemism for plants and birds and the cradle of Hainan's main rivers. However, this area has experienced recent and ongoing deforestation and habitat fragmentation. To quantify habitat loss and fragmentation of natural forests, as well as the land-cover changes in the Changhua watershed, we analyzed Landsat images obtained in 1988, 1995, and 2005. Land-cover dynamics analysis showed that natural forests increased in area (97,909 to 104,023 ha) from 1988 to 1995 but decreased rapidly to 76,306 ha over the next decade. Rubber plantations increased steadily throughout the study period while pulp plantations rapidly expanded after 1995. Similar patterns of land cover change were observed in protected areas, indicating a lack of enforcement. Natural forests conversion to rubber and pulp plantations has a general negative effect on biodiversity, primarily through habitat fragmentation. The fragmentation analysis showed that natural forests area was reduced and patch number increased, while patch size and connectivity decreased. These land-cover changes threatened local biodiversity, especially island endemic species. Both natural forests losses and fragmentation should be stopped by strict enforcement to prevent further damage. Preserving the remaining natural forests and enforcing the status of protected areas should be a management priority to maximize the watershed's biodiversity conservation value.

  12. Bright Soil Near 'McCool': Salty Deja Vu?

    NASA Technical Reports Server (NTRS)

    2006-01-01

    While driving eastward toward the northwestern flank of 'McCool Hill,' the wheels of NASA's Mars Exploration Rover Spirit churned up the largest amount of bright soil discovered so far in the mission. This image from Spirit's navigation camera, taken on the rover's 787th Martian day, or sol, of exploration (March 21, 2006), shows the strikingly light tone and large extent of the deposit.

    A few days earlier, Spirit's wheels unearthed a small patch of light-toned material informally named 'Tyrone.' In images from Spirit's panoramic camera, 'Tyrone' strongly resembled both 'Arad' and 'Paso Robles,' two patches of light-toned soils discovered earlier in the mission. Spirit found 'Paso Robles' in 2005 while climbing 'Cumberland Ridge' on the western slope of 'Husband Hill.' In early January 2006, the rover discovered 'Arad' on the basin floor just south of 'Husband Hill.' Spirit's instruments confirmed that those soils had a salty chemistry dominated by iron-bearing sulfates. Spirit's miniature thermal emission spectrometer is analyzing this most recent discovery, and researchers will compare it with those other deposits.

    These discoveries indicate that light-toned soil deposits might be widely distributed on the flanks and valley floors of the 'Columbia Hills' region in Gusev Crater on Mars. The salts may record the past presence of water, as they are easily mobilized and concentrated in liquid solution.

  13. Landscape Pattern Dynamic Change Research of Harbin Songbei Based on GIS Technology

    NASA Astrophysics Data System (ADS)

    Chenyang, Ding; Kun, Wang; Kang, Li Kang

    2018-05-01

    With the rapid development of social economy in the Songhua River basin, there are big dynamic change of the landscape of the new area beside the river bank, which is represented by Harbin Songbei. This paper selects 13 representative indexes from landscape and patch level, analyzes the cause and process of the change of landscape pattern in Songbei during 2005-2015, and probes into the characteristics of the change based on the principle of landscape ecology, using remote sensing and GIS technology and Fragstats3.3 software data statistics.

  14. Re-evaluating the concept of "dominant/index tumor nodule" in multifocal prostate cancer.

    PubMed

    Huang, Cheng Cheng; Deng, Fang-Ming; Kong, Max X; Ren, Qinhu; Melamed, Jonathan; Zhou, Ming

    2014-05-01

    Prostate cancer (PCa) often presents as a multifocal disease with heterogeneity in Gleason score (GS) and genetic alterations. Dominant/index tumor nodule (DN), the largest nodule in a multifocal disease, is presumed to harbor the most aggressive biological behavior and therefore dictate the overall clinical behavior of PCa. In this study, we examined the pathological features of DN and re-evaluated the validity of the "DN" concept in multifocal PCa. A total of 201 consecutive radical prostatectomy specimens were totally submitted and examined. All independent cancer foci were recorded with prognostically important pathological parameters. Unifocal and multifocal disease was present in 25 (12.4 %) and 176 (87.6 %) cases, respectively. In 20 (11.3 %) multifocal cases, the highest GS, the largest tumor volume (TV), and extraprostatic extension (EPE) did not concur in the same tumor nodules. Non-DNs had a higher GS and EPE in 13 cases each and had both the highest GS and EPE in 5 cases. In the majority of multifocal prostate cancer (88.7 %), DNs have the highest GS and EPE. In these cases, DN is still a valid concept and can be used for assigning overall GS and procuring tissue for research. However, in a significant number of cases (11.3 %), the largest TV, the highest GS, and EPE did not concur in the same tumor nodules. In these cases, pathologists should de-emphasize the concept of DN. Instead, they should place the emphasis on the multifocal nature of the disease and document the pathological features of all independent tumor foci that have the largest TV, the highest GS, and EPE.

  15. Mapping Surface Cover Parameters Using Aggregation Rules and Remotely Sensed Cover Classes. Version 1.9

    NASA Technical Reports Server (NTRS)

    Arain, Altaf M.; Shuttleworth, W. James; Yang, Z-Liang; Michaud, Jene; Dolman, Johannes

    1997-01-01

    A coupled model, which combines the Biosphere-Atmosphere Transfer Scheme (BATS) with an advanced atmospheric boundary-layer model, was used to validate hypothetical aggregation rules for BATS-specific surface cover parameters. The model was initialized and tested with observations from the Anglo-Brazilian Amazonian Climate Observational Study and used to simulate surface fluxes for rain forest and pasture mixes at a site near Manaus in Brazil. The aggregation rules are shown to estimate parameters which give area-average surface fluxes similar to those calculated with explicit representation of forest and pasture patches for a range of meteorological and surface conditions relevant to this site, but the agreement deteriorates somewhat when there are large patch-to-patch differences in soil moisture. The aggregation rules, validated as above, were then applied to remotely sensed 1 km land cover data set to obtain grid-average values of BATS vegetation parameters for 2.8 deg x 2.8 deg and 1 deg x 1 deg grids within the conterminous United States. There are significant differences in key vegetation parameters (aerodynamic roughness length, albedo, leaf area index, and stomatal resistance) when aggregate parameters are compared to parameters for the single, dominant cover within the grid. However, the surface energy fluxes calculated by stand-alone BATS with the 2-year forcing, data from the International Satellite Land Surface Climatology Project (ISLSCP) CDROM were reasonably similar using aggregate-vegetation parameters and dominant-cover parameters, but there were some significant differences, particularly in the western USA.

  16. Positive correlation between genetic diversity and fitness in a large, well-connected metapopulation.

    PubMed

    Vandewoestijne, Sofie; Schtickzelle, Nicolas; Baguette, Michel

    2008-11-05

    Theory predicts that lower dispersal, and associated gene flow, leads to decreased genetic diversity in small isolated populations, which generates adverse consequences for fitness, and subsequently for demography. Here we report for the first time this effect in a well-connected natural butterfly metapopulation with high population densities at the edge of its distribution range. We demonstrate that: (1) lower genetic diversity was coupled to a sharp decrease in adult lifetime expectancy, a key component of individual fitness; (2) genetic diversity was positively correlated to the number of dispersing individuals (indicative of landscape functional connectivity) and adult population size; (3) parameters inferred from capture-recapture procedures (population size and dispersal events between patches) correlated much better with genetic diversity than estimates usually used as surrogates for population size (patch area and descriptors of habitat quality) and dispersal (structural connectivity index). Our results suggest that dispersal is a very important factor maintaining genetic diversity. Even at a very local spatial scale in a metapopulation consisting of large high-density populations interconnected by considerable dispersal rates, genetic diversity can be decreased and directly affect the fitness of individuals. From a biodiversity conservation perspective, this study clearly shows the benefits of both in-depth demographic and genetic analyses. Accordingly, to ensure the long-term survival of populations, conservation actions should not be blindly based on patch area and structural isolation. This result may be especially pertinent for species at their range margins, particularly in this era of rapid environmental change.

  17. Intelligent Predictor of Energy Expenditure with the Use of Patch-Type Sensor Module

    PubMed Central

    Li, Meina; Kwak, Keun-Chang; Kim, Youn-Tae

    2012-01-01

    This paper is concerned with an intelligent predictor of energy expenditure (EE) using a developed patch-type sensor module for wireless monitoring of heart rate (HR) and movement index (MI). For this purpose, an intelligent predictor is designed by an advanced linguistic model (LM) with interval prediction based on fuzzy granulation that can be realized by context-based fuzzy c-means (CFCM) clustering. The system components consist of a sensor board, the rubber case, and the communication module with built-in analysis algorithm. This sensor is patched onto the user's chest to obtain physiological data in indoor and outdoor environments. The prediction performance was demonstrated by root mean square error (RMSE). The prediction performance was obtained as the number of contexts and clusters increased from 2 to 6, respectively. Thirty participants were recruited from Chosun University to take part in this study. The data sets were recorded during normal walking, brisk walking, slow running, and jogging in an outdoor environment and treadmill running in an indoor environment, respectively. We randomly divided the data set into training (60%) and test data set (40%) in the normalized space during 10 iterations. The training data set is used for model construction, while the test set is used for model validation. The experimental results revealed that the prediction error on treadmill running simulation was improved by about 51% and 12% in comparison to conventional LM for training and checking data set, respectively. PMID:23202166

  18. Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes

    PubMed Central

    Marion, Scott R.; Lombana, Alfonso V.; Orth, Robert J.

    2016-01-01

    Human-driven habitat fragmentation is cited as one of the most pressing threats facing many coastal ecosystems today. Many experiments have explored the consequences of fragmentation on fauna in one foundational habitat, seagrass beds, but have either surveyed along a gradient of existing patchiness, used artificial materials to mimic a natural bed, or sampled over short timescales. Here, we describe faunal responses to constructed fragmented landscapes varying from 4–400 m2 in two transplant garden experiments incorporating live eelgrass (Zostera marina L.). In experiments replicated within two subestuaries of the Chesapeake Bay, USA across multiple seasons and non-consecutive years, we comprehensively censused mesopredators and epifaunal communities using complementary quantitative methods. We found that community properties, including abundance, species richness, Simpson and functional diversity, and composition were generally unaffected by the number of patches and the size of the landscape, or the intensity of sampling. Additionally, an index of competition based on species co-occurrences revealed no trends with increasing patch size, contrary to theoretical predictions. We extend conclusions concerning the invariance of animal communities to habitat fragmentation from small-scale observational surveys and artificial experiments to experiments conducted with actual living plants and at more realistic scales. Our findings are likely a consequence of the rapid life histories and high mobility of the organisms common to eelgrass beds, and have implications for both conservation and restoration, suggesting that even small patches can rapidly promote abundant and diverse faunal communities. PMID:27244652

  19. Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes.

    PubMed

    Lefcheck, Jonathan S; Marion, Scott R; Lombana, Alfonso V; Orth, Robert J

    2016-01-01

    Human-driven habitat fragmentation is cited as one of the most pressing threats facing many coastal ecosystems today. Many experiments have explored the consequences of fragmentation on fauna in one foundational habitat, seagrass beds, but have either surveyed along a gradient of existing patchiness, used artificial materials to mimic a natural bed, or sampled over short timescales. Here, we describe faunal responses to constructed fragmented landscapes varying from 4-400 m2 in two transplant garden experiments incorporating live eelgrass (Zostera marina L.). In experiments replicated within two subestuaries of the Chesapeake Bay, USA across multiple seasons and non-consecutive years, we comprehensively censused mesopredators and epifaunal communities using complementary quantitative methods. We found that community properties, including abundance, species richness, Simpson and functional diversity, and composition were generally unaffected by the number of patches and the size of the landscape, or the intensity of sampling. Additionally, an index of competition based on species co-occurrences revealed no trends with increasing patch size, contrary to theoretical predictions. We extend conclusions concerning the invariance of animal communities to habitat fragmentation from small-scale observational surveys and artificial experiments to experiments conducted with actual living plants and at more realistic scales. Our findings are likely a consequence of the rapid life histories and high mobility of the organisms common to eelgrass beds, and have implications for both conservation and restoration, suggesting that even small patches can rapidly promote abundant and diverse faunal communities.

  20. Pretreatment of pericardial patches with antibiotics does not alter patch healing in vivo.

    PubMed

    Bai, Hualong; Kuwahara, Go; Wang, Mo; Brownson, Kirstyn E; Foster, Trenton R; Yamamoto, Kota; Xing, Ying; Dardik, Alan

    2016-04-01

    Pretreatment with antibiotics is commonly performed before surgical implantation of prosthetic materials. We previously showed that pericardial patches are infiltrated by macrophages and arterial stem cells after implantation into an artery. We hypothesized that antibiotic pretreatment would diminish the number of cells infiltrating into the patch, potentially affecting early neointimal formation. Bovine pericardial patches were pretreated with saline, bacitracin (500 U/mL), or cephalexin (10 mg/mL) for 30 minutes before implantation into the Wistar rat infrarenal aorta. Patches were retrieved on day 7 or day 30 and analyzed for histology and cell infiltration. Markers of proliferation, apoptosis, vascular cell identity, and M1 and M2 macrophage subtypes were examined using immunofluorescence and immunohistochemistry. Extracted proteins were analyzed by Western blot. At day 7, pericardial patches pretreated with bacitracin or cephalexin showed similar amounts of neointimal thickening (P = .55) and cellular infiltration (P = .42) compared with control patches. Patches pretreated with antibiotics showed similar proliferation (P = .09) and apoptosis (P = .84) as control patches. The cell composition of the neointima in pretreated patches was similar to control patches, with a thin endothelial layer overlying a thin layer of smooth muscle cells (P = .45), and containing similar numbers of CD34-positive (P = .26) and vascular endothelial growth factor receptor 2-positive (P = .31) cells. Interestingly, within the body of the patch, there were fewer macrophages (P = .0003) and a trend towards fewer endothelial progenitor cells (P = .051). No M1 macrophages were found in or around any of the patches. M2 macrophages were present around the patches, and there was no difference in numbers of M2 macrophages surrounding control patches and patches pretreated with antibiotics (P = .24). There was no difference in neointimal thickness at day 30 between control patches and patches pretreated with antibiotics (P = .52). Pretreatment of bovine pericardial patches with the antibiotics bacitracin or cephalexin has no detrimental effect on early patch healing, with similar neointimal thickness, cellular infiltration, and numbers of M2 macrophages compared with control patches. These results suggest that the host vessel response to patch angioplasty using pericardial patches is adaptive remodeling (eg, arterial healing). Published by Elsevier Inc.

  1. A recent advance in the automatic indexing of the biomedical literature.

    PubMed

    Névéol, Aurélie; Shooshan, Sonya E; Humphrey, Susanne M; Mork, James G; Aronson, Alan R

    2009-10-01

    The volume of biomedical literature has experienced explosive growth in recent years. This is reflected in the corresponding increase in the size of MEDLINE, the largest bibliographic database of biomedical citations. Indexers at the US National Library of Medicine (NLM) need efficient tools to help them accommodate the ensuing workload. After reviewing issues in the automatic assignment of Medical Subject Headings (MeSH terms) to biomedical text, we focus more specifically on the new subheading attachment feature for NLM's Medical Text Indexer (MTI). Natural Language Processing, statistical, and machine learning methods of producing automatic MeSH main heading/subheading pair recommendations were assessed independently and combined. The best combination achieves 48% precision and 30% recall. After validation by NLM indexers, a suitable combination of the methods presented in this paper was integrated into MTI as a subheading attachment feature producing MeSH indexing recommendations compliant with current state-of-the-art indexing practice.

  2. Patch dynamics and the timing of colonization-abandonment events by male Kirtland’s Warblers in an early succession habitat

    USGS Publications Warehouse

    Donner, Deahn M.; Ribic, Christine; Probst, John R.

    2010-01-01

    Habitat colonization and abandonment affects the distribution of a species in space and time, ultimately influencing the duration of time habitat is used and the total area of habitat occupied in any given year. Both aspects have important implications to long-term conservation planning. The importance of patch isolation and area to colonization–extinction events is well studied, but little information exists on how changing regional landscape structure and population dynamics influences the variability in the timing of patch colonization and abandonment events. We used 26 years of Kirtland’s Warbler (Dendroica kirtlandii) population data taken during a habitat restoration program (1979–2004) across its historical breeding range to examine the influence of patch attributes and temporal large-scale processes, specifically the rate of habitat turnover and fraction of occupied patches, on the year-to-year timing of patch colonization and abandonment since patch origin. We found the timing of patch colonization and abandonment was influenced by patch and large-scale regional factors. In this system, larger patches were typically colonized earlier (i.e., at a younger age) and abandoned later than smaller patches. Isolated patches (i.e., patches farther from another occupied patch) were generally colonized later and abandoned earlier. Patch habitat type affected colonization and abandonment; colonization occurred at similar patch ages between plantation and wildfire areas (9 and 8.5 years, respectively), but plantations were abandoned at earlier ages (13.9 years) than wildfire areas (16.4 years) resulting in shorter use. As the fraction of occupied patches increased, patches were colonized and abandoned at earlier ages. Patches were abandoned at older ages when the influx of new habitat patches was at low and high rates. Our results provide empirical support for the temporal influence of patch dynamics (i.e., patch destruction, creation, and succession) on local colonization and extinction processes that help explain large-scale patterns of habitat occupancy. Results highlight the need for practitioners to consider the timing of habitat restoration as well as total amount and spatial arrangement of habitat to sustain populations.

  3. Ethinyl Estradiol and Norelgestromin Transdermal Patch

    MedlinePlus

    ... the skin. One patch is applied once a week for 3 weeks, followed by a patch-free week. Follow the directions on your prescription label carefully, ... new patch on the same day of the week (the Patch Change Day). Apply a new patch ...

  4. Economic Need among Older Latinos: Applying The Elder Economic Security Standard™ Index

    PubMed Central

    Wallace, Steven P.; Padilla-Frausto, D. Imelda; Smith, Susan

    2013-01-01

    The first official U.S. federal poverty line was developed in the 1960s; since the mid-1990s the scientific consensus has been that it has become outdated and inaccurate. This article explains the key elements of the current federal measure that are inaccurate for older adults in general and older Latinos specifically. An alternative is described that addresses the key failings of the current measure. The alternative, the Elder Economic Security Standard™ Index (Elder Index), adapts a national methodology to the basic costs of living in California for 2007 using data from the American Community Survey, and other public data sources. The results show that the amount needed for basic economic security in California is higher than the federal poverty level in all counties, and averages about twice the federal level. Housing costs are the largest component of costs in most counties, although health care is the largest component for couples in lower housing cost counties. Among singles and couples age 65 and over in California, almost 60% of Latinos have incomes below the Elder Index compared to one-quarter of non-Latino whites. The rates are higher among renters, and older Latinos are more likely than non-Latino whites to rent. Applying the Elder Index in California documents the disproportionate rates of economic insecurity among older Latinos. The findings indicate that changes to public programs such as Social Security and Medicare that decrease benefits or increase costs will have disproportionately negative impact on the ability of most older Latinos to pay for basic needs. PMID:23857068

  5. Understanding spatial-temporal urban expansion pattern (1990-2009) using impervious surface data and landscape indexes: a case study in Guangzhou (China)

    NASA Astrophysics Data System (ADS)

    Fan, Fenglei; Fan, Wei

    2014-01-01

    A new viewpoint for understanding the urban expansion using impervious surface information, which is obtained using remote sensing imagery is presented. The purpose of this study is to understand and describe the urban expansion pattern with the view of impervious surfaces instead of the conventional view of land use/land cover. Six years' worth of impervious surface data (1990-2009) of Guangzhou are extracted via linear spectral unmixing analysis methods and spatial and temporal characteristics are discussed in detail. The area, density, and gravity centers changes of the impervious surfaces are analyzed to explain internal/external urban expansion. Meanwhile, five landscape indexes, such as patch density, edge density, mean patch size, area-weighted, and fragmentation index, are utilized to describe landscape changes of Guangzhou in past 20 years, which are influenced deeply by the impervious surface expansion. In order to detail landscape changes, two transects corresponding to the two urban expansion directions are designed and five landscape metrics in these two transects are reported. Conclusions can be drawn and shown as following: (1) temporally, the area of impervious surfaces increases from 12,998 to 59,911 ha from 1990 to 2009. The amount of impervious surface varies in different periods. The annual growth rates of impervious surface area during 1990-1995, 1995-1998, and 1998-2000 are 10.16%, 11.61%, and 10.78%, respectively; (2) annual growth rates decrease from 10.78% (1998-2000) to 5.67% (2000-2003). Nevertheless, from 2003-2009, the annual growth rate has a slight increase compared to a former period. The rate is 5.91% (3) spatially, gravity centers of medium and high percentage impervious surfaces migrate slightly; and (4) according to the gradient analysis in the two transects, it can be observed that the high percentage of impervious surface increases gradually in new city districts (from west to east and from south to north).

  6. Patch occupancy and dispersal of spruce grouse on the edge of its range in Maine

    USGS Publications Warehouse

    Whitcomb, S.A.; Servello, F.A.; O'Connell, A.F.

    1996-01-01

    We surveyed 18 habitat patches (black spruce (Picea marinana) - tamarack (Larix larcina) wetlands) for spruce grouse (Dendragapus canadensis canadensis) on Mount Desert Island, Maine, during April-May in 1992 and 1993 to determine patch occupancy relative to patch area. We also equipped nine juvenile grouse with radio transmitters to determine movement and habitat use outside of patches during autumn dispersal. The 2 large patches (77 and 269 ha), 5 of 6 medium-sized (11-26 ha) patches, and 1 of 10 small (4-8 ha) patches were occupied. Spruce grouse occupied smaller habitat patches than previously reported, and occupied patches were closer (P < 0.05) to the nearest occupied patch (x = 1.2 km) than were unoccupied patches (x = 2.5 km). Eight of nine juvenile grouse left their natal habitat patch during autumn dispersal, and net dispersal distance (x = 2.3 km) was greater than that reported for grouse in areas with more contiguous habitat. Dispersing juveniles used all major forest types and 33 % of relocations were in deciduous forest. Thus, deciduous forest was not an absolute dispersal barrier.

  7. Precipitation Estimation from Remotely Sensed Information using Artificial Neural Network-Cloud Classification System

    NASA Astrophysics Data System (ADS)

    Hong, Yang

    Precipitation estimation from satellite information (VISIBLE , IR, or microwave) is becoming increasingly imperative because of its high spatial/temporal resolution and board coverage unparalleled by ground-based data. After decades' efforts of rainfall estimation using IR imagery as basis, it has been explored and concluded that the limitations/uncertainty of the existing techniques are: (1) pixel-based local-scale feature extraction; (2) IR temperature threshold to define rain/no-rain clouds; (3) indirect relationship between rain rate and cloud-top temperature; (4) lumped techniques to model high variability of cloud-precipitation processes; (5) coarse scales of rainfall products. As continuing studies, a new version of Precipitation Estimation from Remotely Sensed Information using Artificial Neural Network (PERSIANN), called Cloud Classification System (CCS), has been developed to cope with these limitations in this dissertation. CCS includes three consecutive components: (1) a hybrid segmentation algorithm, namely Hierarchically Topographical Thresholding and Stepwise Seeded Region Growing (HTH-SSRG), to segment satellite IR images into separated cloud patches; (2) a 3D feature extraction procedure to retrieve both pixel-based local-scale and patch-based large-scale features of cloud patch at various heights; (3) an ANN model, Self-Organizing Nonlinear Output (SONO) network, to classify cloud patches into similarity-based clusters, using Self-Organizing Feature Map (SOFM), and then calibrate hundreds of multi-parameter nonlinear functions to identify the relationship between every cloud types and their underneath precipitation characteristics using Probability Matching Method and Multi-Start Downhill Simplex optimization techniques. The model was calibrated over the Southwest of United States (100°--130°W and 25°--45°N) first and then adaptively adjusted to the study region of North America Monsoon Experiment (65°--135°W and 10°--50°N) using observations from Geostationary Operational Environmental Satellite (GOES) IR imagery, Next Generation Radar (NEXRAD) rainfall network, and Tropical Rainfall Measurement Mission (TRMM) microwave rain rate estimates. CCS functions as a distributed model that first identifies cloud patches and then dispatches different but the best matching cloud-precipitation function for each cloud patch to estimate instantaneous rain rate at high spatial resolution (4km) and full temporal resolution of GOES IR images (every 30-minute). Evaluated over a range of spatial and temporal scales, the performance of CCS compared favorably with GOES Precipitation Index (GPI), Universal Adjusted GPI (UAGPI), PERSIANN, and Auto-Estimator (AE) algorithms, consistently. Particularly, the large number of nonlinear functions and optimum IR-rain rate thresholds of CCS model are highly variable, reflecting the complexity of dominant cloud-precipitation processes from cloud patch to cloud patch over various regions. As a result, CCS can more successfully capture variability in rain rate at small scales than existing algorithms and potentially provides rainfall product from GOES IR-NEXARD-TRMM TMI (SSM/I) at 0.12° x 0.12° and 3-hour resolution with relative low standard error (˜=3.0mm/hr) and high correlation coefficient (˜=0.65).

  8. Emergency Victim Care. A Training Manual for Emergency Medical Technicians. Module 14. Appendix I: Communicating with Deaf and Hearing Impaired Patients. Appendix II: Medical Terminology. Appendix III: EMS Organizations. Appendix IV: Legislation (Ohio). Glossary of Terms. Index. Revised.

    ERIC Educational Resources Information Center

    Ohio State Dept. of Education, Columbus. Div. of Vocational Education.

    This training manual for emergency medical technicians, one of 14 modules that comprise the Emergency Victim Care textbook, contains appendixes, a glossary, and an index. The first appendix is an article on communicating with deaf and hearing-impaired patients. Appendix 2, the largest section in this manual, is an introduction to medical…

  9. Forest Cover Change Analysis in Inner Mongolia Using Remote Sensing Data

    NASA Astrophysics Data System (ADS)

    Xie, S.; Gong, J.; Huang, X.

    2018-04-01

    Forest is the lung of the earth, and it has important effect on maintaining the ecological balance of the whole earth. This study was conducted in Inner Mongolia during the year 1990-2015. Land use and land cover data were used to obtain forest cover change of Inner Mongolia. In addition, protected area data, road data, ASTER GDEM data were combined with forest cover change data to analyze the relationship between them. Moreover, patch density and landscape shape index were calculated to analyze forest change in perspective of landscape aspect. The results indicated that forest area increased overall during the study period. However, a few cities still had a phenomenon of reduced forest area. Results also demonstrated that the construction of protected area had positive effect on protecting forest while roads may disturbed forest due to human activities. In addition, forest patches in most of cities of Inner Mongolia tended to be larger and less fragmented. This paper reflected forest change in Inner Mongolia objectively, which is helpful for policy making by government.

  10. [Selection of distance thresholds of urban forest landscape connectivity in Shenyang City].

    PubMed

    Liu, Chang-fu; Zhou, Bin; He, Xing-yuan; Chen, Wei

    2010-10-01

    By using the QuickBird remote sensing image interpretation data of urban forests in Shenyang City in 2006, and with the help of geographical information system, this paper analyzed the landscape patches of the urban forests in the area inside the third ring-road of Shenyang. Based on the habitat availability and the dispersal potential of animal and plant species, 8 distance thresholds (50, 100, 200, 400, 600, 800, 1000, and 1200 m) were selected to compute the integral index of connectivity, probability of connectivity, and important value of the landscape patches, and the computed values were used for analyzing and screening the distance thresholds of urban forest landscape connectivity in the City. The results showed that the appropriate distance thresholds of the urban forest landscape connectivity in Shenyang City in 2006 ranged from 100 to 400 m, with 200 m being most appropriate. It was suggested that the distance thresholds should be increased or decreased according to the performability of urban forest landscape connectivity and the different demands for landscape levels.

  11. Effects of pretreatment with a urea-containing emollient on nickel allergic skin reactions.

    PubMed

    Kuzmina, Natalia; Nyrén, Miruna; Lodén, Marie; Edlund, Fredrik; Emtestam, Lennart

    2005-01-01

    The aim of this study was to evaluate the effect of a moisturizer containing urea on allergic contact dermatitis. Twenty-five nickel-sensitized patients and five controls (non-sensitized volunteers) applied such a moisturizer on the volar side of one forearm twice daily for 20 days, while the other forearm served as the control. After treatment with the moisturizer, patch tests with 0%, 0.5% and 2% NiSO4 in petrolatum were applied in a randomized manner on each arm. After 72 h, the skin reactions were blindly evaluated by clinical scoring and by measuring transepidermal water loss and electrical impedance. After treatment, the baseline transepidermal water loss values were lower and the baseline magnitude impedance index values were higher on the pretreated forearm. According to clinical scoring and measurements with the two physical measurement techniques, the degree of the patch test reactions was equal. All control subjects had negative nickel tests. We concluded that the skin reactivity to nickel in nickel-sensitized patients is not significantly affected by use of the urea-containing moisturizer.

  12. Runoff and erosion in a pinon-juniper woodland: Influence of vegetation patches

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Reid, K.D.; Wilcox, B.P.; Breshears, D.D.

    1999-12-01

    In many semiarid regions, runoff and erosion differ according to vegetation patch type. These differences, although hypothesized to fundamentally affect ecological processes, have been poorly quantified. In a semiarid pinion-juniper woodland [Pinus edulis Engelm. and Juniperus monosperma (Engelm) Sarg.] in northern New Mexico, the authors measured runoff and erosion from the three patch types that compose these woodlands: Canopy patches (those beneath woody plants), vegetated patched in intercanopy areas, and bare patches in intercanopy areas. The bare intercanopy patches exhibited the highest rates, followed by vegetated intercanopy patches and then by canopy patches. Large convective summer storms, though relatively infrequent,more » generated much of the runoff and most of the sediment; prolonged frontal storms were capable of generating considerable runoff but little sediment. A portion of the runoff and most of the sediment generated from bare intercanopy patches was redistributed down-slope, probably to adjacent vegetated intercanopy patches, demonstrating connectivity between these two patch types. Their results indicate that there are significant and important differences in runoff and sediment production from the three patch types; that bare intercanopy patches act as sources of both water and sediment for the vegetated intercanopy patches; and that the transfer of water and sediment at small scales is both frequent enough and substantial enough to be considered ecologically significant.« less

  13. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mandage, Revati S.; McAteer, R. T. James, E-mail: mcateer@nmsu.edu

    A magnetic power spectral analysis is performed on 53 solar active regions, observed from 2011 August to 2012 July. Magnetic field data obtained from the Helioseismic and Magnetic Imager, inverted as Active Region Patches, are used to study the evolution of the magnetic power index as each region rotates across the solar disk. Active regions are classified based on the numbers and sizes of solar flares they produce in order to study the relationship between flare productivity and the magnetic power index. The choice of window size and inertial range plays a key role in determining the correct magnetic powermore » index. The overall distribution of magnetic power indices has a range of 1.0–2.5. Flare-quiet regions peak at a value of 1.6. However, flare-productive regions peak at a value of 2.2. Overall, the histogram of the distribution of power indices of flare-productive active regions is well separated from flare-quiet active regions. Only 12% of flare-quiet regions exhibit an index greater than 2, whereas 90% of flare-productive regions exhibit an index greater than 2. Flare-quiet regions exhibit a high temporal variance (i.e., the index fluctuates between high and low values), whereas flare-productive regions maintain an index greater than 2 for several days. This shows the importance of including the temporal evolution of active regions in flare prediction studies, and highlights the potential of a 2–3 day prediction window for space weather applications.« less

  14. An extended patch-dynamic framework for food chains in fragmented landscapes

    PubMed Central

    Liao, Jinbao; Chen, Jiehong; Ying, Zhixia; Hiebeler, David E.; Nijs, Ivan

    2016-01-01

    Habitat destruction, a key determinant of species loss, can be characterized by two components, patch loss and patch fragmentation, where the former refers to the reduction in patch availability, and the latter to the division of the remaining patches. Classical metacommunity models have recently explored how food web dynamics respond to patch loss, but the effects of patch fragmentation have largely been overlooked. Here we develop an extended patch-dynamic model that tracks the patch occupancy of the various trophic links subject to colonization-extinction-predation dynamics by incorporating species dispersal with patch connectivity. We found that, in a simple food chain, species at higher trophic level become extinct sooner with increasing patch loss and fragmentation due to the constraint in resource availability, confirming the trophic rank hypothesis. Yet, effects of fragmentation on species occupancy are largely determined by patch loss, with maximal fragmentation effects occurring at intermediate patch loss. Compared to the spatially explicit simulations that we also performed, the current model with pair approximation generates similar community patterns especially in spatially clustered landscapes. Overall, our extended framework can be applied to model more complex food webs in fragmented landscapes, broadening the scope of existing metacommunity theory. PMID:27608823

  15. [Frequency and timing of meals and changes in body mass index: Analysis of the data from the Adventist Health Study-2].

    PubMed

    Kahleová, Hana; Lloren, Jan Irene; Mashchak, Andrew; Hill, Martin; Fraser, Gary

    2016-01-01

    Our study focuses on examining the relationship between the frequency and timing of meals and changes in BMI in the Adventist Health Study-2 (AHS-2) which represents a relatively healthy population in North America. A longitudinal analysis was undertaken using data from 48 673 individuals monitored over an average period of 7.43 ± 1.24 years. The number of meals per day, length of nighttime fasting, eating breakfast and timing of the largest meal of the day (breakfast 5-11 a.m., lunch noon-4 p.m. or supper/dinner 5-11 p.m.) were used as independent variables. The primary output was the change in body mass index (BMI) once in a year. Linear regression analyses were adjusted for all important demographic factors and lifestyle factors. Consumption of 1 and 2 meals a day was associated with decrease in BMI (-0.04; 95% CI -0.06 to -0.03 and -0.02; 95% CI -0.03 to -0,01 kg.m-2 per year, respectively). On the other hand, consumption of 3 or more meals a day was associated with increase in BMI, in a linear relation (p < 0.001). BMI of those who skipped breakfast increased (0.029; 95% CI 0.021-0.037 kg.m-2 per year; p = 0.002) as compared to no BMI change in those who had breakfast (-0.0002; 95% CI -0.005 to + 0.004 kg.m-2 per year). Those, whose largest meal of the day was breakfast, recorded no significant change in BMI (-0.002 95% CI -0.008 to +0.004 kg.m-2 per year). On the contrary, the largest supper was associated with the greatest increase in BMI (0.034; 95% CI 0.029-0.040 kg.m-2 per year). Our results indicate that eating less frequently, consuming breakfast and having the largest meal in the morning hours may be effective measures to prevent weight gain.Key words: body mass index (BMI) - frequency and timing of meals - body mass regulation - breakfast.

  16. Metal Patch Antenna

    NASA Technical Reports Server (NTRS)

    Chamberlain, Neil F. (Inventor); Zawadzki, Mark S. (Inventor); Hodges, Richard E. (Inventor)

    2012-01-01

    Disclosed herein is a patch antenna comprises a planar conductive patch attached to a ground plane by a support member, and a probe connector in electrical communication with the conductive patch arranged to conduct electromagnetic energy to or from the conductive patch, wherein the conductive patch is disposed essentially parallel to the ground plane and is separated from the ground plane by a spacing distance; wherein the support member comprises a plurality of sides disposed about a central axis oriented perpendicular to the conductive patch and the ground plane; wherein the conductive patch is solely supported above the ground plane by the support member; and wherein the support member provides electrical communication between the planer conductive patch and the ground plane.

  17. Probabilistic Downscaling of Remote Sensing Data with Applications for Multi-Scale Biogeochemical Flux Modeling.

    PubMed

    Stoy, Paul C; Quaife, Tristan

    2015-01-01

    Upscaling ecological information to larger scales in space and downscaling remote sensing observations or model simulations to finer scales remain grand challenges in Earth system science. Downscaling often involves inferring subgrid information from coarse-scale data, and such ill-posed problems are classically addressed using regularization. Here, we apply two-dimensional Tikhonov Regularization (2DTR) to simulate subgrid surface patterns for ecological applications. Specifically, we test the ability of 2DTR to simulate the spatial statistics of high-resolution (4 m) remote sensing observations of the normalized difference vegetation index (NDVI) in a tundra landscape. We find that the 2DTR approach as applied here can capture the major mode of spatial variability of the high-resolution information, but not multiple modes of spatial variability, and that the Lagrange multiplier (γ) used to impose the condition of smoothness across space is related to the range of the experimental semivariogram. We used observed and 2DTR-simulated maps of NDVI to estimate landscape-level leaf area index (LAI) and gross primary productivity (GPP). NDVI maps simulated using a γ value that approximates the range of observed NDVI result in a landscape-level GPP estimate that differs by ca 2% from those created using observed NDVI. Following findings that GPP per unit LAI is lower near vegetation patch edges, we simulated vegetation patch edges using multiple approaches and found that simulated GPP declined by up to 12% as a result. 2DTR can generate random landscapes rapidly and can be applied to disaggregate ecological information and compare of spatial observations against simulated landscapes.

  18. Probabilistic Downscaling of Remote Sensing Data with Applications for Multi-Scale Biogeochemical Flux Modeling

    PubMed Central

    Stoy, Paul C.; Quaife, Tristan

    2015-01-01

    Upscaling ecological information to larger scales in space and downscaling remote sensing observations or model simulations to finer scales remain grand challenges in Earth system science. Downscaling often involves inferring subgrid information from coarse-scale data, and such ill-posed problems are classically addressed using regularization. Here, we apply two-dimensional Tikhonov Regularization (2DTR) to simulate subgrid surface patterns for ecological applications. Specifically, we test the ability of 2DTR to simulate the spatial statistics of high-resolution (4 m) remote sensing observations of the normalized difference vegetation index (NDVI) in a tundra landscape. We find that the 2DTR approach as applied here can capture the major mode of spatial variability of the high-resolution information, but not multiple modes of spatial variability, and that the Lagrange multiplier (γ) used to impose the condition of smoothness across space is related to the range of the experimental semivariogram. We used observed and 2DTR-simulated maps of NDVI to estimate landscape-level leaf area index (LAI) and gross primary productivity (GPP). NDVI maps simulated using a γ value that approximates the range of observed NDVI result in a landscape-level GPP estimate that differs by ca 2% from those created using observed NDVI. Following findings that GPP per unit LAI is lower near vegetation patch edges, we simulated vegetation patch edges using multiple approaches and found that simulated GPP declined by up to 12% as a result. 2DTR can generate random landscapes rapidly and can be applied to disaggregate ecological information and compare of spatial observations against simulated landscapes. PMID:26067835

  19. Selective processing of multiple features in the human brain: effects of feature type and salience.

    PubMed

    McGinnis, E Menton; Keil, Andreas

    2011-02-09

    Identifying targets in a stream of items at a given constant spatial location relies on selection of aspects such as color, shape, or texture. Such attended (target) features of a stimulus elicit a negative-going event-related brain potential (ERP), termed Selection Negativity (SN), which has been used as an index of selective feature processing. In two experiments, participants viewed a series of Gabor patches in which targets were defined as a specific combination of color, orientation, and shape. Distracters were composed of different combinations of color, orientation, and shape of the target stimulus. This design allows comparisons of items with and without specific target features. Consistent with previous ERP research, SN deflections extended between 160-300 ms. Data from the subsequent P3 component (300-450 ms post-stimulus) were also examined, and were regarded as an index of target processing. In Experiment A, predominant effects of target color on SN and P3 amplitudes were found, along with smaller ERP differences in response to variations of orientation and shape. Manipulating color to be less salient while enhancing the saliency of the orientation of the Gabor patch (Experiment B) led to delayed color selection and enhanced orientation selection. Topographical analyses suggested that the location of SN on the scalp reliably varies with the nature of the to-be-attended feature. No interference of non-target features on the SN was observed. These results suggest that target feature selection operates by means of electrocortical facilitation of feature-specific sensory processes, and that selective electrocortical facilitation is more effective when stimulus saliency is heightened.

  20. Modeling trade-offs between plant fiber and toxins: a framework for quantifying risks perceived by foraging herbivores.

    PubMed

    Camp, Meghan J; Shipley, Lisa A; Johnson, Timothy R; Forbey, Jennifer Sorensen; Rachlow, Janet L; Crowell, Miranda M

    2015-12-01

    When selecting habitats, herbivores must weigh multiple risks, such as predation, starvation, toxicity, and thermal stress, forcing them to make fitness trade-offs. Here, we applied the method of paired comparisons (PC) to investigate how herbivores make trade-offs between habitat features that influence selection of food patches. The method of PC measures utility and the inverse of utility, relative risk, and makes trade-offs and indifferences explicit by forcing animals to make choices between two patches with different types of risks. Using a series of paired-choice experiments to titrate the equivalence curve and find the marginal rate of substitution for one risk over the other, we evaluated how toxin-tolerant (pygmy rabbit Brachylagus idahoensis) and fiber-tolerant (mountain cottontail rabbit Sylviagus nuttallii) herbivores differed in their hypothesized perceived risk of fiber and toxins in food. Pygmy rabbits were willing to consume nearly five times more of the toxin 1,8-cineole in their diets to avoid consuming higher levels of fiber than were mountain cottontails. Fiber posed a greater relative risk for pygmy rabbits than cottontails and cineole a greater risk for cottontails than pygmy rabbits. Our flexible modeling approach can be used to (1) quantify how animals evaluate and trade off multiple habitat attributes when the benefits and risks are difficult to quantify, and (2) integrate diverse risks that influence fitness and habitat selection into a single index of habitat value. This index potentially could be applied to landscapes to predict habitat selection across several scales.

  1. Effects of Rotigotine on REM Sleep Behavior Disorder in Parkinson Disease

    PubMed Central

    Wang, Yan; Yang, Yuechang; Wu, Huijuan; Lan, Danmei; Chen, Ying; Zhao, Zhongxin

    2016-01-01

    Study Objectives: REM sleep behavior disorder (RBD) is a common manifestation of Parkinson disease (PD). In this study, we assessed the effects of rotigotine transdermal patch on RBD features in patients with PD. Methods: In this prospective open-label study, eleven PD patients with untreated RBD were administered rotigotine patches for up to seven months to ameliorate their parkinsonism. The severities of their RBD symptoms before and after rotigotine therapy were evaluated through patient and bed partner interviews, a validated evaluation scale (REM sleep behavior disorder questionnaire-Hong Kong, RBDQ-HK), and blinded assessments based on video-polysomnographic (VPSG) measure. Results: Rotigotine improved parkinsonism and subjective sleep quality in PD patients with RBD. The RBDQ-HK total score, especially the Factor 2 score, was decreased, which demonstrated that the subjective severity of RBD symptoms was improved after rotigotine treatment, especially the frequency and severity of abnormal RBD-related motor behaviors. The VPSG analyses showed that the total sleep time (TST) and stage 1% were increased and that the PLMS index was decreased. However, no differences in the RBD-related sleep measures were observed. Conclusions: The improved RBD symptoms and VPSG measures of PD patients in this study (TST, stage 1%, and PLMS index) suggest that, in PD, rotigotine may partially improve RBD-related symptoms. Rotigotine should be considered to be an optional drug for the treatment of RBD symptoms in PD. Citation: Wang Y, Yang Y, Wu H, Lan D, Chen Y, Zhao Z. Effects of rotigotine on REM sleep behavior disorder in Parkinson disease. J Clin Sleep Med 2016;12(10):1403–1409. PMID:27568909

  2. Energy development and avian nest survival in Wyoming, USA: A test of a common disturbance index

    USGS Publications Warehouse

    Hethcoat, Matthew G.; Chalfoun, Anna D.

    2015-01-01

    Global energy demands continue to result in new and emerging sources of anthropogenic disturbance to populations and systems. Here, we assessed the influence of natural gas development on a critical component of fitness (nest survival) for Brewer’s sparrow (Spizella breweri), sagebrush sparrow (Artemisiospiza nevadensis), and sage thrasher (Oreoscoptes montanus), three species of sagebrush-obligate songbirds that are of conservation concern, and assessed the efficacy of a commonly used index of oil and gas development intensity (well density) for estimating habitat transformation and predicting species’ responses. During 2008–2009 and 2011–2012 we monitored 926 nests within two natural gas fields in western Wyoming, USA. We calculated landscape metrics (habitat loss, amount of edge, patch shape complexity, and mean patch size) to identify the aspect of landscape transformation most captured by well density. Well density was most positively associated with the amount of sagebrush habitat loss within 1 square kilometer. Nest survival was relatively invariant with respect to well density for all three species. In contrast, nest survival rates of all three species generally decreased with surrounding habitat loss due to energy development. Thus, although well density and habitat loss were strongly correlated, well density resulted in overly conservative estimates of nest survival probability. Our results emphasize the importance of careful evaluation of the appropriateness of particular indices for quantifying the effects of human-induced habitat change. For managers concerned about the effects of natural gas development or similar forms of human land use to co-occurring breeding birds, we recommend minimizing the amount of associated habitat conversion.

  3. Light transmission and preference of eye patches for occlusion treatment.

    PubMed

    Heo, Hwan; Park, Jung Won; Park, Sang Woo

    2013-01-01

    To investigate light transmission and preference for six eye patches for occlusion therapy. Six patches were examined, including; Ortopad Fun Pack, Ortopad Flesh, Kawamoto A-1, Kawamoto A-2, 3M Opticlude, and Everade Eye Guard. The size and the presence of a light blocking pad of patches were investigated. The amount of light transmitted through the patches was evaluated, using a digital light meter and a model eye, in three different environments; indoors with fluorescent light, outdoors on a sunny day, and strong light from illuminator. After patching the normal eye, the flash visual evoked potential (VEP) was measured. Thirty patients with amblyopia or horizontal strabismus, who received occlusion therapy as initial treatment, were included. After using all six patches, patients completed a 7-item questionnaire regarding the patch preference for size, color and shape, adhesive power, pain with removal, skin irritation after removing patch, parent's preference and overall opinion. All patches had a light-blocking pad, except the 3M Nexcare. Ortopad had the strongest light blocking power in the three environments, and the 3M Nexcare had the weakest power. In flash VEP, Ortopad and Kawamoto patches showed flat, but 3M Nexcare and Everade Eye Guard showed normal response. There were significant preferential differences among the patches in all the items of the questionnaire (P<0.05). In comparison between the patches respectively, 3M Nexcare received the lowest satisfaction in pain when removing a patch and skin irritation after removing a patch. Kawamoto A-2 received the lowest score in the overall satisfaction. We found differences in the light-blocking power and in the preference of the various patches for the occlusion treatment. This is a pilot study regarding only characteristics and preferences of patches. Further clinical studies regarding the relationship between characteristics or preferences of patches and outcomes of occlusion treatment are needed.

  4. Tolerability, usability and acceptability of dissolving microneedle patch administration in human subjects

    PubMed Central

    Arya, Jaya; Henry, Sebastien; Kalluri, Haripriya; McAllister, Devin V.; Pewin, Winston P.; Prausnitz, Mark R.

    2017-01-01

    To support translation of microneedle patches from pre-clinical development into clinical trials, this study examined the effect of microneedle patch application on local skin reactions, reliability of use and acceptability to patients. Placebo patches containing dissolving microneedles were administered to fifteen human participants. Microneedle patches were well tolerated in the skin with no pain or swelling and only mild erythema localized to the site of patch administration that resolved fully within seven days. Microneedle patches could be administered by hand without the need of an applicator and delivery efficiencies were similar for investigator-administration and self-administration. Microneedle patch administration was not considered painful and the large majority of subjects were somewhat or fully confident that they self-administered patches correctly. Microneedle patches were overwhelmingly preferred over conventional needle and syringe injection. Altogether, these results demonstrate that dissolving microneedle patches were well tolerated, easily usable and strongly accepted by human subjects, which will facilitate further clinical translation of this technology. PMID:28285193

  5. Context-dependent colonization dynamics: Regional reward contagion drives local compression in aquatic beetles.

    PubMed

    Pintar, Matthew R; Resetarits, William J

    2017-09-01

    Habitat selection by colonizing organisms is an important factor in determining species abundance and community dynamics at multiple spatial scales. Many organisms select habitat patches based on intrinsic patch quality, but patches exist in complex landscapes linked by dispersal and colonization, forming metapopulations and metacommunities. Perceived patch quality can be influenced by neighbouring patches through spatial contagion, wherein perceived quality of one patch can extend beyond its borders and either increase or decrease the colonization of neighbouring patches and localities. These spatially explicit colonization dynamics can result in habitat compression, wherein more colonists occupy a patch or locality than in the absence of spatial context dependence. Previous work on contagion/compression focused primarily on the role of predators in driving colonization patterns. Our goal was to determine whether resource abundance can drive multi-scale colonization dynamics of aquatic beetles through the processes of contagion and compression in naturally colonized experimental pools. We established two levels (high/low quality) of within-patch resource abundances (leaf litter) using an experimental landscape of mesocosms, and assayed colonization by 35 species of aquatic beetles. Patches were arranged in localities (sets of two patches), which consisted of a combination of two patch-level resource levels in a 2 × 2 factorial design, allowing us to assay colonization at both locality and patch levels. We demonstrate that patterns of species abundance and richness of colonizing aquatic beetles are determined by patch quality and context-dependent processes at multiple spatial scales. Localities that consisted of at least one high-quality patch were colonized at equivalent rates that were higher than localities containing only low-quality patches, displaying regional reward contagion. In localities that consisted of one high- and one low-quality patch, reward contagion produced by higher leaf litter levels resulted in greater abundance of beetles in such localities, which then compressed into the highest quality patches. Our results provide further support for the critical roles of habitat selection and spatial context, particularly the quality of neighbouring habitat patches, in generating patterns of species abundances and community structure across landscapes. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

  6. Description of Lutzomyia (Helcocyrtomyia) tolimensis, a new species of phlebotomine sandfly (Diptera: Psychodidae) from Colombia.

    PubMed

    Carrasquilla, María C; Munstermann, Leonard; Marín, Dairo; Ocampo, Clara; Ferro, Cristina

    2012-12-01

    A description is presented of Lutzomyia tolimensis sp. nov., a new species of the subgenus Helcocyrtomyia, series sanguinaria. It was collected in dwellings, peridomestic environment and in nearby forest patches located in the foothills of the Andean Central Cordillera, where in 2004-2006 occurred the largest epidemic ever recorded of leishmaniasis in Colombia. The male of this species is differentiated from other members of the series sanguinaria based on the following combination of characters: (i) base of coxite with 0-3 subequal setae, (ii) spines of gonostyle organized in positions 2.1.2, (iii) spines inserted on distal half of gonostyle and (iv) relationship of alar indices. The female is recognized principally by the following characters: (i) palpomere V longer than III, (ii) length of labro-epipharynx and (iii) relationship of the alar indices.

  7. Oil Slick in the Gulf of Mexico May 24th View

    NASA Image and Video Library

    2017-12-08

    NASA image acquired May 24, 2010 On May 24, 2010, the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA’s Terra satellite captured this false-color, high-resolution view of the very tip of the Mississippi River Delta. Ribbons and patches of oil that have leaked from the Deepwater Horizon well offshore are silver against the light blue color of the adjacent water. Vegetation is red. To learn more about this image go to: earthobservatory.nasa.gov/NaturalHazards/view.php?id=44078 To learn more about the oil spill go to: www.nasa.gov/topics/earth/features/oil-creep.html NASA Goddard Space Flight Center is home to the nation's largest organization of combined scientists, engineers and technologists that build spacecraft, instruments and new technology to study the Earth, the sun, our solar system, and the universe.

  8. Houston, Texas taken by the STS-109 crew

    NASA Image and Video Library

    2002-03-05

    STS109-714-035 (1-12 March 2002) --- The astronauts on board the Space Shuttle Columbia took this 70mm picture featuring the greater metropolitan Houston, Texas area. The view direction is northwest, with Houston's downtown as the brightest region (center) where major highways converge. Interstate 10 is a fine line extending towards the lower right, around the north side of Galveston Bay, part of which appears in the lower right corner. The interstate also appears as a line cutting through the wooded parts of west Houston (just west of downtown). Bush Intercontinental Airport is the largest light patch on the view north of downtown, and lies next to Highway 59, a thin white line that stretches toward the right side of the picture. Forests of East Texas make the top right corner of the view a dark green.

  9. Tracked Active Region Patches for MDI and HMI

    NASA Astrophysics Data System (ADS)

    Turmon, Michael; Hoeksema, J. Todd; Bobra, Monica

    2014-06-01

    We describe tracked active-region patch data products that have been developed for HMI (HMI Active Region Patches, or HARPs) and for MDI (MDI Tracked Active Region Patches, or MDI TARPs). Both data products consist of tracked magnetic features on the scale of solar active regions. The now-released HARP data product covers 2010-present (>2000 regions to date). Like the HARPs, the MDI TARP data set is a catalog of active regions (ARs), indexed by a region ID number, analogous to a NOAA AR number, and time. The TARPs contain 6170 regions spanning 72000 images taken over 1996-2010, and will be availablein the MDI resident archive (RA).MDI TARPs are computed based on the 96-minute synoptic magnetograms and intensitygrams. As with the related HARP data product, the approximate threshold for significance is 100G. Use of both image types together allows faculae and sunspots to be separated out as sub-classes of activity, in addition to identifying the overall active region that they are in. After being identified in single images, the magnetically-active patches are grouped and tracked from image to image. Merges among growing active regions, as well as faint active regions hovering at the threshold of detection, are handled automatically. Regions are tracked from their inception until they decay within view, or transit off the visible disk. For each active region and for each time, a bitmap image is stored containing the precise outline of the active region. Also, metadata such as areas and integrated fluxes are stored for each AR and for each time. Because there is a cross-calibration between the HMI and MDI magnetograms (Liu et al. 2012), it is straightforward to use the same classification and tracking rules for the HMI HARPs and the MDI TARPs. We show results demonstrating region correspondence, region boundary agreement, and agreement of flux metadata using the approximately 140 regions in the May 2010-October 2010 time period. We envision several uses for these data products, including data subsetting and per-active-region studies such as the relation between AR structure and energetic events like flares. Also, the combined HARP/MDI-TARP catalog can enable extended studies, such as solarirradiance, across cycles 23 and 24, and allow analyses that had been confined to just a handful of ARs to be extended to a larger set.

  10. LabPatch, an acquisition and analysis program for patch-clamp electrophysiology.

    PubMed

    Robinson, T; Thomsen, L; Huizinga, J D

    2000-05-01

    An acquisition and analysis program, "LabPatch," has been developed for use in patch-clamp research. LabPatch controls any patch-clamp amplifier, acquires and records data, runs voltage protocols, plots and analyzes data, and connects to spreadsheet and database programs. Controls within LabPatch are grouped by function on one screen, much like an oscilloscope front panel. The software is mouse driven, so that the user need only point and click. Finally, the ability to copy data to other programs running in Windows 95/98, and the ability to keep track of experiments using a database, make LabPatch extremely versatile. The system requirements include Windows 95/98, at least a 100-MHz processor and 16 MB RAM, a data acquisition card, digital-to-analog converter, and a patch-clamp amplifier. LabPatch is available free of charge at http://www.fhs.mcmaster.ca/huizinga/.

  11. A regional-scale Ocean Health Index for Brazil.

    PubMed

    Elfes, Cristiane T; Longo, Catherine; Halpern, Benjamin S; Hardy, Darren; Scarborough, Courtney; Best, Benjamin D; Pinheiro, Tiago; Dutra, Guilherme F

    2014-01-01

    Brazil has one of the largest and fastest growing economies and one of the largest coastlines in the world, making human use and enjoyment of coastal and marine resources of fundamental importance to the country. Integrated assessments of ocean health are needed to understand the condition of a range of benefits that humans derive from marine systems and to evaluate where attention should be focused to improve the health of these systems. Here we describe the first such assessment for Brazil at both national and state levels. We applied the Ocean Health Index framework, which evaluates ten public goals for healthy oceans. Despite refinements of input data and model formulations, the national score of 60 (out of 100) was highly congruent with the previous global assessment for Brazil of 62. Variability in scores among coastal states was most striking for goals related to mariculture, protected areas, tourism, and clean waters. Extractive goals, including Food Provision, received low scores relative to habitat-related goals, such as Biodiversity. This study demonstrates the applicability of the Ocean Health Index at a regional scale, and its usefulness in highlighting existing data and knowledge gaps and identifying key policy and management recommendations. To improve Brazil's ocean health, this study suggests that future actions should focus on: enhancing fisheries management, expanding marine protected areas, and monitoring coastal habitats.

  12. Group-living herbivores weigh up food availability and dominance status when making patch-joining decisions.

    PubMed

    Stears, Keenan; Kerley, Graham I H; Shrader, Adrian M

    2014-01-01

    Two key factors that influence the foraging behaviour of group-living herbivores are food availability and individual dominance status. Yet, how the combination of these factors influences the patch-joining decisions of individuals foraging within groups has scarcely been explored. To address this, we focused on the patch-joining decisions of group-living domestic goats (Capra hircus). When individuals were tested against the top four ranked goats of the herd, we found that at patches with low food availability they avoided these dominant patch-holders and only joined subordinates (i.e. costs outweighed benefits). However, as the amount of food increased, the avoidance of the top ranked individuals declined. Specifically, goats shifted and joined the patch of an individual one dominance rank higher than the previous dominant patch holder when the initial quantity of food in the new patch was twice that of the lower ranking individual's patch (i.e. benefits outweighed costs). In contrast, when individuals chose between patches held by dominant goats, other than the top four ranked goats, and subordinate individuals, we found that they equally joined the dominant and subordinate patch-holders. This joining was irrespective of the dominance gap, absolute rank of the dominant patch-holder, sex or food availability (i.e. benefits outweighed costs). Ultimately, our results highlight that herbivores weigh up the costs and benefits of both food availability and patch-holder dominance status when making patch-joining decisions. Furthermore, as the initial quantity of food increases, food availability becomes more important than dominance with regard to influencing patch-joining decisions.

  13. Covalent modification of pericardial patches for sustained rapamycin delivery inhibits venous neointimal hyperplasia

    PubMed Central

    Bai, Hualong; Lee, Jung Seok; Chen, Elizabeth; Wang, Mo; Xing, Ying; Fahmy, Tarek M.; Dardik, Alan

    2017-01-01

    Prosthetic grafts and patches are commonly used in cardiovascular surgery, however neointimal hyperplasia remains a significant concern, especially under low flow conditions. We hypothesized that delivery of rapamycin from nanoparticles (NP) covalently attached to patches allows sustained site-specific delivery of therapeutic agents targeted to inhibit localized neointimal hyperplasia. NP were covalently linked to pericardial patches using EDC/NHS chemistry and could deliver at least 360 ng rapamycin per patch without detectable rapamycin in serum; nanoparticles were detectable in the liver, kidney and spleen but no other sites within 24 hours. In a rat venous patch angioplasty model, control patches developed robust neointimal hyperplasia on the patch luminal surface characterized by Eph-B4-positive endothelium and underlying SMC and infiltrating cells such as macrophages and leukocytes. Patches delivering rapamycin developed less neointimal hyperplasia, less smooth muscle cell proliferation, and had fewer infiltrating cells but retained endothelialization. NP covalently linked to pericardial patches are a novel composite delivery system that allows sustained site-specific delivery of therapeutics; NP delivering rapamycin inhibit patch neointimal hyperplasia. NP linked to patches may represent a next generation of tissue engineered cardiovascular implants. PMID:28071663

  14. Food quality and the risk of light exposure affect patch-choice decisions in the slime mold Physarum polycephalum.

    PubMed

    Latty, Tanya; Beekman, Madeleine

    2010-01-01

    How individuals deal with multiple conflicting demands is an important aspect of foraging ecology, yet work on foraging behavior has typically neglected neurologically simple organisms. Here we examine the impact of an abiotic risk (light) and energetic status on the foraging decisions of a protist, the slime mold Physarum polycephalum. We examined patch choice in a "non-risky" environment by presenting starved and non-starved P. polycephalum amoebas with a choice between two shaded food patches (one high quality, one low quality). We next examined patch choice in the presence of a conflict between foraging risk (light exposure) and food quality by presenting amoebas with a choice between a shaded, low-quality patch, and a light-exposed, high-quality patch. When both patches were shaded, 100% of amoebas selected the higher quality food patch, irrespective of food-quality differences or the individual's energetic status. When light exposure and food quality conflicted, amoebas selected the patch with the higher food quality when the quality difference between the patches was high. When the quality difference between patches was small, amoebas selected the shaded, lower quality patch.

  15. Ontogenetic changes in accumulation of rhizomes in monoclonal patch of Miscanthus sinensis Anderss. in warm temperate region of Japan.

    PubMed

    Kobayashi, Katsumi; Yokoi, Yota; Masuzawa, Takehiro

    2011-05-01

    To determine the main benefits of clonal expansion of Miscanthus sinensis patches (monoclones), we observed the annual pattern of the areal expansion of a number of M. sinensis patches and examined how the quantity of rhizomes in such patches is related to changes in their basal area. To forage for nutriments, a patch must continuously widen its habitat. Patches annually expanded centrifugally by sympodial branching of short rhizomes, which originated in tillering that occurred more than once a year. However, the basal area of the patches approached a ceiling as the patches aged. Both the number and the weight of rhizomes in the patches continued to increase as long as the basal area expanded. The mean weight of rhizomes in patches also initially increased quickly, but then reached a ceiling as the clones expanded. Similarly, the amount of reserve substance per shoot in the patches increased asymptotically along with the clonal expansion, depending on the rhizome mass allotted to each shoot. These results suggest that, in the clonal growth of M. sinensis patches, the accumulation of reserve matter in the rhizomes is more important than foraging in new areas.

  16. Covalent modification of pericardial patches for sustained rapamycin delivery inhibits venous neointimal hyperplasia

    NASA Astrophysics Data System (ADS)

    Bai, Hualong; Lee, Jung Seok; Chen, Elizabeth; Wang, Mo; Xing, Ying; Fahmy, Tarek M.; Dardik, Alan

    2017-01-01

    Prosthetic grafts and patches are commonly used in cardiovascular surgery, however neointimal hyperplasia remains a significant concern, especially under low flow conditions. We hypothesized that delivery of rapamycin from nanoparticles (NP) covalently attached to patches allows sustained site-specific delivery of therapeutic agents targeted to inhibit localized neointimal hyperplasia. NP were covalently linked to pericardial patches using EDC/NHS chemistry and could deliver at least 360 ng rapamycin per patch without detectable rapamycin in serum; nanoparticles were detectable in the liver, kidney and spleen but no other sites within 24 hours. In a rat venous patch angioplasty model, control patches developed robust neointimal hyperplasia on the patch luminal surface characterized by Eph-B4-positive endothelium and underlying SMC and infiltrating cells such as macrophages and leukocytes. Patches delivering rapamycin developed less neointimal hyperplasia, less smooth muscle cell proliferation, and had fewer infiltrating cells but retained endothelialization. NP covalently linked to pericardial patches are a novel composite delivery system that allows sustained site-specific delivery of therapeutics; NP delivering rapamycin inhibit patch neointimal hyperplasia. NP linked to patches may represent a next generation of tissue engineered cardiovascular implants.

  17. Manipulating Refractive Index in Organic Light-Emitting Diodes.

    PubMed

    Salehi, Amin; Chen, Ying; Fu, Xiangyu; Peng, Cheng; So, Franky

    2018-03-21

    In a conventional organic light-emitting diode (OLED), only a fraction of light can escape to the glass substrate and air. Most radiation is lost to two major channels: waveguide modes and surface plasmon polaritons. It is known that reducing the refractive indices of the constituent layers in an OLED can enhance light extraction. Among all of the layers, the refractive index of the electron transport layer (ETL) has the largest impact on light extraction because it is the layer adjacent to the metallic cathode. Oblique angle deposition (OAD) provides a way to manipulate the refractive index of a thin film by creating an ordered columnar void structure. In this work, using OAD, the refractive index of tris(8-hydroxyquinoline)aluminum (Alq3) can be tuned from 1.75 to 1.45. With this low-index ETL deposited by OAD, the resulting phosphorescent OLED shows nearly 30% increase in light extraction efficiency.

  18. Grassland Fire and Cattle Grazing Regulate Reptile and Amphibian Assembly Among Patches

    NASA Astrophysics Data System (ADS)

    Larson, Danelle M.

    2014-12-01

    Fire and grazing are common management schemes of grasslands globally and are potential drivers of reptilian and amphibian (herpetofauna) metacommunity dynamics. Few studies have assessed the impacts of fire and cattle grazing on herpetofauna assemblages in grasslands. A patch-burn grazing study at Osage Prairie, MO, USA in 2011-2012 created landscape patches with treatments of grazing, fire, and such legacies. Response variables were measured before and after the application of treatments, and I used robust-design occupancy modeling to estimate patch occupancy and detection rate within patches, and recolonization and extinction (i.e., dispersal) across patches. I conducted redundancy analysis and a permuted multivariate analysis of variance to determine if patch type and the associated environmental factors explained herpetofauna assemblage. Estimates for reptiles indicate that occupancy was seasonally constant in Control patches ( ψ ~ 0.5), but declined to ψ ~ 0.15 in patches following the applications of fire and grazing. Local extinctions for reptiles were higher in patches with fire or light grazing ( ɛ ~ 0.7) compared to the controls. For the riparian herpetofaunal community, patch type and grass height were important predictors of abundance; further, the turtles, lizards, snakes, and adult amphibians used different patch types. The aquatic amphibian community was predicted by watershed and in-stream characteristics, irrespective of fire or grazing. The varying responses from taxonomic groups demonstrate habitat partitioning across multiple patch types undergoing fire, cattle grazing, and legacy effects. Prairies will need an array of patch types to accommodate multiple herpetofauna species.

  19. Applications of multiple change point detections to monthly streamflow and rainfall in Xijiang River in southern China, part II: trend and mean

    NASA Astrophysics Data System (ADS)

    Chen, Yongqin David; Jiang, Jianmin; Zhu, Yuxiang; Huang, Changxing; Zhang, Qiang

    2018-05-01

    This article, as part II, illustrates applications of other two algorithms, i.e., the scanning F test of change points in trend and the scanning t test of change points in mean, to both series of the normalized streamflow index (NSI) at Makou section in the Xijiang River and the normalized precipitation index (NPI) over the watershed of Xijiang River. The results from these two tests show mainly positive coherency of changes between the NSI and NPI. However, some minor negative coherency patches may expose somewhat impacts of human activities, but they were often associated with nearly normal climate periods. These suggest that the runoff still depends upon well the precipitation in the Xijiang catchment. The anthropogenic disturbances have not yet reached up to violating natural relationship on the whole in this river.

  20. Comparison of smallpox outbreak control strategies using a spatial metapopulation model.

    PubMed

    Hall, I M; Egan, J R; Barrass, I; Gani, R; Leach, S

    2007-10-01

    To determine the potential benefits of regionally targeted mass vaccination as an adjunct to other smallpox control strategies we employed a spatial metapopulation patch model based on the administrative districts of Great Britain. We counted deaths due to smallpox and to vaccination to identify strategies that minimized total deaths. Results confirm that case isolation, and the tracing, vaccination and observation of case contacts can be optimal for control but only for optimistic assumptions concerning, for example, the basic reproduction number for smallpox (R0=3) and smaller numbers of index cases ( approximately 10). For a wider range of scenarios, including larger numbers of index cases and higher reproduction numbers, the addition of mass vaccination targeted only to infected districts provided an appreciable benefit (5-80% fewer deaths depending on where the outbreak started with a trigger value of 1-10 isolated symptomatic individuals within a district).

  1. A hydrogel pericardial patch.

    PubMed

    Allder, M A; Guilbeau, E J; Brandon, T A; Walker, A S; Koeneman, J B; Fisk, R L

    1990-01-01

    Patients undergoing repeat cardiac operations are higher operative risks than those undergoing an initial cardiac procedure because adhesion formation can occur if the native pericardium is not closed. A unique composite patch that may be used to augment the pericardial tissue when primary closure is not possible has been developed. The patch is made of a hydrogel, poly (2-hydroxyethyl methacrylate), reinforced with an ethylene tetrafluoroethylene (ETFE) mesh. The mesh provides the needed mechanical properties, whereas the patch's surface properties are comparable to the hydrogel. Two types of patches were fabricated: one with the mesh weave at a perpendicular orientation and one at 45 degrees to the principle loading direction. The patches were mechanically tested and compared with canine pericardium. Ultimate tensile strength of the patches is not significantly different from canine pericardium (p less than 0.05), are the patch suture strength is nearly twice that of canine pericardium. The perpendicular patch is stiffer than canine pericardium, whereas the 45 degree patch is not (p less than 0.05). The 45 degree patch shows considerable promise as a pericardial substitute because it closely matches the properties native canine pericardium.

  2. Selection of important ecological source patches base on Green Infrastructure theory: A case study of Wuhan city

    NASA Astrophysics Data System (ADS)

    Ke, Yuanyuan; Yu, Yan; Tong, Yan

    2018-01-01

    Selecting urban ecological patches is of great significance for constructing urban green infrastructure network, protecting urban biodiversity and ecological environment. With the support of GIS technology, a criterion for selecting sources of patches was developed according to existing planning. Then ecological source patches of terrestrial organism, aquatic and amphibious organism were selected in Wuhan city. To increase the connectivity of the ecological patches and achieve greater ecological protection benefits, the green infrastructure networks in Wuhan city were constructed with the minimum path analysis method. Finally, the characteristics of ecological source patches were analyzed with landscape metrics, and ecological protection importance degree of ecological source patches were evaluated comprehensively. The results showed that there were 23 important ecological source patches in Wuhan city, among which Sushan Temple Forest Patch, Lu Lake and Shangshe Lake Wetland Patch were the most important in all kinds of patches for ecological protection. This study can provide a scientific basis for the preservation of urban ecological space, the delineation of natural conservation areas and the protection of biological diversity.

  3. The effects of patch shape and connectivity on nest site selection and reproductive success of the Indigo Bunting.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Weldon, Aimee Jean

    2004-07-01

    Description – Ph.D Dissertation. North Carolina State University. Raleigh, North Carolina. 135 pp. Abatract - Habitat fragmentation and its associated effects have been blamed for the recent population declines of many Neotropical migratory bird species. Increased predation and parasitism resulting from edge-related effects have been implicated for poor nesting success in many studies, mostly of forest interior species. However, little attention has been devoted to disturbance-dependent birds. In this study, I examine how patch shape and connectivity in fragmented landscapes affects the reproductive success of disturbance-dependent bird species, specifically the Indigo Bunting (Passerina cyanea). I conducted my study in amore » landscape-scale experimental system of similar-area habitat patches that differed in connectivity and in shape. Shapes differed between edgy and rectangular forms, where edgy patches contained 50% more edge than rectangular patches. I tested whether edgy patches function as ecological traps for species with strong edge preferences, by leading them to select dangerous habitats. Indigo Buntings preferentially selected edgy patches over rectangular patches, but experienced significantly lower reproductive success in edgy patches early in the season. Although predation pressure intensified in rectangular patches late in the season, seasonal fecundity was still significantly lower in edgy patches, providing the first empirical evidence that edges can function as ecological traps for Indigo Buntings. A second objective of my study was to evaluate the efficacy of conservation corridors for disturbance-dependent bird species. Conservation corridors have become a popular strategy to preserve biodiversity and promote gene flow in fragmented landscapes, but corridors may also have negative consequences. I tested the hypothesis that corridors can increase nest predation risk in connected patches relative to unconnected patches. Nest predation rates increased significantly in connected patches compared to unconnected rectangular patches, but were similar between connected patches and unconnected edgy patches. This suggests that the increase in predator activity in connected patches is largely attributable to edge effects incurred through the addition of a corridor. This is the first landscape-scale study to experimentally demonstrate the potential negative effects of conservation corridors.« less

  4. Damage Evaluation of Concrete Column under Impact Load Using a Piezoelectric-Based EMI Technique.

    PubMed

    Fan, Shuli; Zhao, Shaoyu; Qi, Baoxin; Kong, Qingzhao

    2018-05-17

    One of the major causes of damage to column-supported concrete structures, such as bridges and highways, are collisions from moving vehicles, such as cars and ships. It is essential to quantify the collision damage of the column so that appropriate actions can be taken to prevent catastrophic events. A widely used method to assess structural damage is through the root-mean-square deviation (RMSD) damage index established by the collected data; however, the RMSD index does not truly provide quantitative information about the structure. Conversely, the damage volume ratio that can only be obtained via simulation provides better detail about the level of damage in a structure. Furthermore, as simulation can also provide the RMSD index relating to that particular damage volume ratio, the empirically obtained RMSD index can thus be related to the structural damage degree through comparison of the empirically obtained RMSD index to numerically-obtained RMSD. Thus, this paper presents a novel method in which the impact-induced damage to a structure is simulated in order to obtain the relationship between the damage volume ratio to the RMSD index, and the relationship can be used to predict the true damage degree by comparison to the empirical RMSD index. In this paper, the collision damage of a bridge column by moving vehicles was simulated by using a concrete beam model subjected to continuous impact loadings by a freefalling steel ball. The variation in admittance signals measured by the surface attached lead zirconate titanate (PZT) patches was used to establish the RMSD index. The results demonstrate that the RMSD index and the damage ratio of concrete have a linear relationship for the particular simulation model.

  5. Implementation of a tree algorithm in MCNP code for nuclear well logging applications.

    PubMed

    Li, Fusheng; Han, Xiaogang

    2012-07-01

    The goal of this paper is to develop some modeling capabilities that are missing in the current MCNP code. Those missing capabilities can greatly help for some certain nuclear tools designs, such as a nuclear lithology/mineralogy spectroscopy tool. The new capabilities to be developed in this paper include the following: zone tally, neutron interaction tally, gamma rays index tally and enhanced pulse-height tally. The patched MCNP code also can be used to compute neutron slowing-down length and thermal neutron diffusion length. Copyright © 2011 Elsevier Ltd. All rights reserved.

  6. Paper trails. Document management is no silver bullet, but it can patch holes as hospitals transition to paperless.

    PubMed

    Gamble, Kate Huvane

    2009-10-01

    Hospitals are leveraging content management to ease the transition from a paper-based to electronic environment. Document management is used to scan, index and archive medical records and financial documents. Even fully integrated health systems receive outside documents such as lab results and referrals that must be incorporated into the patient record. The data in scanned documents cannot be used for trending purposes without manual work. The market for natural language processing, a tool used to extract data elements from scanned documents, could ramp up significantly in the near future.

  7. Levels of desertification risk in the Sicilian forests according to MEDALUS-ESPI protocol

    NASA Astrophysics Data System (ADS)

    Ragusa, M. A.; Rapicavoli, V.

    2017-07-01

    The authors estimated the desertification risk in a specific area of the Mediterranean, analyzing the main types of forests and reforestation. Through the Environmentally Sensitive Patch Index (ESPI), the authors have made an overall risk ranking in the woods, in the Sicily Region, simulated up to 2030. It is inferred that the risk of desertification in the forests of Sicily region is now reduced. In the last fifty years the forests were reduced by 17.4 percent, they remained unchanged for 21 percent, were up 61.6 percent at the end of the twentieth century.

  8. Evaporation and transpiration from forests in Central Europe - relevance of patch-level studies for spatial scaling

    NASA Astrophysics Data System (ADS)

    Köstner, B.

    Spatial scaling from patch to the landscape level requires knowledge on the effects of vegetation structure on maximum surface conductances and evaporation rates. The following paper summarizes results on atmospheric, edaphic, and structural controls on forest evaporation and transpiration observed in stands of Norway spruce (Picea abies), Scots pine (Pinus sylvestris) and European beech (Fagus sylvatica). Forest canopy transpiration (Ec) was determined by tree sapflow measurements scaled to the stand level. Estimates of understory transpiration and forest floor evaporation were derived from lysimeter and chamber measurements. Strong reduction of Ec due to soil drought was only observed at a Scots pine stand when soil water content dropped below 16% v/v. Although relative responses of Ec on atmospheric conditions were similar, daily maximum rates of could differ more than 100% between forest patches of different structure (1.5-3.0mmd-1 and 2.6-6.4mmd-1 for spruce and beech, respectively). A significant decrease of Ecmax per leaf area index with increasing stand age was found for monocultures of Norway spruce, whereas no pronounced changes in were observed for beech stands. It is concluded that structural effects on Ecmax can be specified and must be considered for spatial scaling from forest stands to landscapes. Hereby, in conjunction with LAI, age-related structural parameters are important for Norway spruce stands. Although compensating effects of tree canopy layers and understory on total evaporation of forests were observed, more information is needed to quantify structure-function relationships in forests of heterogenous structure.

  9. Arctic Tundra Vegetation Functional Types Based on Photosynthetic Physiology and Optical Properties

    NASA Technical Reports Server (NTRS)

    Huemmrich, Karl F.; Gamon, John; Tweedie, Craig; Campbell, Petya P. K.; Landis, David; Middleton, Elizabeth

    2012-01-01

    Climate change in tundra regions may alter vegetation species composition and ecosystem carbon balance. Remote sensing provides critical tools for monitoring these changes as optical signals provide a way to scale from plot measurements to regional patterns. Gas exchange measurements of pure patches of key vegetation functional types (lichens, mosses, and vascular plants) in sedge tundra at Barrow AK, show three significantly different values of light use efficiency (LUE) with values of 0.013+/-0.001, 0.0018+/-0.0002, and 0.0012 0.0001 mol C/mol absorbed quanta for vascular plants, mosses and lichens, respectively. Further, discriminant analysis of patch reflectance identifies five spectral bands that can separate each vegetation functional type as well as nongreen material (bare soil, standing water, and dead leaves). These results were tested along a 100 m transect where midsummer spectral reflectance and vegetation coverage were measured at one meter intervals. Area-averaged canopy LUE estimated from coverage fractions of the three functional types varied widely, even over short distances. Patch-level statistical discriminant functions applied to in situ hyperspectral reflectance successfully unmixed cover fractions of the vegetation functional types. These functions, developed from the tram data, were applied to 30 m spatial resolution Earth Observing-1 Hyperion imaging spectrometer data to examine regional variability in distribution of the vegetation functional types and from those distributions, the variability of LUE. Across the landscape, there was a fivefold variation in tundra LUE that was correlated to a spectral vegetation index developed to detect vegetation chlorophyll content.

  10. Positive correlation between genetic diversity and fitness in a large, well-connected metapopulation

    PubMed Central

    Vandewoestijne, Sofie; Schtickzelle, Nicolas; Baguette, Michel

    2008-01-01

    Background Theory predicts that lower dispersal, and associated gene flow, leads to decreased genetic diversity in small isolated populations, which generates adverse consequences for fitness, and subsequently for demography. Here we report for the first time this effect in a well-connected natural butterfly metapopulation with high population densities at the edge of its distribution range. Results We demonstrate that: (1) lower genetic diversity was coupled to a sharp decrease in adult lifetime expectancy, a key component of individual fitness; (2) genetic diversity was positively correlated to the number of dispersing individuals (indicative of landscape functional connectivity) and adult population size; (3) parameters inferred from capture-recapture procedures (population size and dispersal events between patches) correlated much better with genetic diversity than estimates usually used as surrogates for population size (patch area and descriptors of habitat quality) and dispersal (structural connectivity index). Conclusion Our results suggest that dispersal is a very important factor maintaining genetic diversity. Even at a very local spatial scale in a metapopulation consisting of large high-density populations interconnected by considerable dispersal rates, genetic diversity can be decreased and directly affect the fitness of individuals. From a biodiversity conservation perspective, this study clearly shows the benefits of both in-depth demographic and genetic analyses. Accordingly, to ensure the long-term survival of populations, conservation actions should not be blindly based on patch area and structural isolation. This result may be especially pertinent for species at their range margins, particularly in this era of rapid environmental change. PMID:18986515

  11. Smart patch integration development of compression connector structural health monitoring in overhead transmission lines

    NASA Astrophysics Data System (ADS)

    Wang, Hong; Wang, Jy-An J.; Ren, Fei; Chan, John

    2016-04-01

    Integration of smart patches into full-tension splice connectors in overhead power transmission lines was investigated. Lead zirconate titanate (PZT) -5A was used as a smart material and an aluminum beam was used as a host structure. Negative electrode termination was examined by using copper adhesive tape and direct bonding methods. Various commercial adhesives were studied for PZT integration onto the host structure. Aluminum beam specimens with integrated PZT smart patches were tested under thermal cycling at a temperature of 125°C, which is the higher-end temperature experienced by in-service aluminum conductor steel-reinforced cables. Electromechanical impedance (EMI) measurements were conducted at room temperature, and the root mean square deviation (RMSD) of the conductance signals was used to analyze the EMI data. It has been shown that the negative electrode method has an important effect on the performance of the integrated PZT. The PZT displayed more susceptibility to cracking when copper tape was used than when direct bonding was used. The reliability of PZT in direct bonding depended on the adhesives used in bonding layers. Although a hard alumina-based adhesive can lead to cracking of the PZT, a high-temperature epoxy with adequate flexibility, such as Duralco 4538D, can provide the desired performance under target thermal cycling conditions. The RMSD parameter can characterize conductance signatures effectively. It also was demonstrated that RMSD can be used to quantify the fatigue of the PZT integration system, although RMSD is used primarily as a damage index in monitoring structural health.

  12. Effects of spatial heterogeneity on butterfly species richness in Rocky Mountain National Park, CO, USA

    USGS Publications Warehouse

    Kumar, S.; Simonson, S.E.; Stohlgren, T.J.

    2009-01-01

    We investigated butterfly responses to plot-level characteristics (plant species richness, vegetation height, and range in NDVI [normalized difference vegetation index]) and spatial heterogeneity in topography and landscape patterns (composition and configuration) at multiple spatial scales. Stratified random sampling was used to collect data on butterfly species richness from seventy-six 20 ?? 50 m plots. The plant species richness and average vegetation height data were collected from 76 modified-Whittaker plots overlaid on 76 butterfly plots. Spatial heterogeneity around sample plots was quantified by measuring topographic variables and landscape metrics at eight spatial extents (radii of 300, 600 to 2,400 m). The number of butterfly species recorded was strongly positively correlated with plant species richness, proportion of shrubland and mean patch size of shrubland. Patterns in butterfly species richness were negatively correlated with other variables including mean patch size, average vegetation height, elevation, and range in NDVI. The best predictive model selected using Akaike's Information Criterion corrected for small sample size (AICc), explained 62% of the variation in butterfly species richness at the 2,100 m spatial extent. Average vegetation height and mean patch size were among the best predictors of butterfly species richness. The models that included plot-level information and topographic variables explained relatively less variation in butterfly species richness, and were improved significantly after including landscape metrics. Our results suggest that spatial heterogeneity greatly influences patterns in butterfly species richness, and that it should be explicitly considered in conservation and management actions. ?? 2008 Springer Science+Business Media B.V.

  13. Understanding Existing Salmonid Habitat Availability and Connectivity to Improve River Management

    NASA Astrophysics Data System (ADS)

    Duffin, J.; Yager, E.; Tonina, D.; Benjankar, R. M.

    2017-12-01

    In the Pacific Northwest river restoration is common for salmon conservation. Mangers need methods to help target restoration to problem areas in rivers to create habitat that meets a species' needs. Hydraulic models and habitat suitability curves provide basic information on habitat availability and overall quality, but these analyses need to be expanded to address habitat quality based on the accessibility of habitats required for multiple life stages. Scientists are starting to use connectivity measurements to understand the longitudinal proximity of habitat patches, which can be used to address the habitat variability of a reach. By evaluating the availability and quality of habitat and calculating the connectivity between complementary habitats, such as spawning and rearing habitats, we aim to identify areas that should be targeted for restoration. To meet these goals, we assessed Chinook salmon habitat on the Lemhi River in Idaho. The depth and velocity outputs from a 2D hydraulic model are used in conjunction with locally created habitat suitability curves to evaluate the availability and quality of habitat for multiple Chinook salmon life stages. To assess the variability of the habitat, connectivity between habitat patches necessary for different life stages is calculated with a proximity index. A spatial representation of existing habitat quality and connectivity between complimentary habitats can be linked to river morphology by the evaluation of local geomorphic characteristics, including sinuosity and channel units. The understanding of the current habitat availability for multiple life stage needs, the connectivity between these habitat patches, and their relationship with channel morphology can help managers better identify restoration needs and direct their limited resources.

  14. Influence of habitat quality, population size, patch size, and connectivity on patch-occupancy dynamics of the middle spotted woodpecker.

    PubMed

    Robles, Hugo; Ciudad, Carlos

    2012-04-01

    Despite extensive research on the effects of habitat fragmentation, the ecological mechanisms underlying colonization and extinction processes are poorly known, but knowledge of these mechanisms is essential to understanding the distribution and persistence of populations in fragmented habitats. We examined these mechanisms through multiseason occupancy models that elucidated patch-occupancy dynamics of Middle Spotted Woodpeckers (Dendrocopos medius) in northwestern Spain. The number of occupied patches was relatively stable from 2000 to 2010 (15-24% of 101 patches occupied every year) because extinction was balanced by recolonization. Larger and higher quality patches (i.e., higher density of oaks >37 cm dbh [diameter at breast height]) were more likely to be occupied. Habitat quality (i.e., density of large oaks) explained more variation in patch colonization and extinction than did patch size and connectivity, which were both weakly associated with probabilities of turnover. Patches of higher quality were more likely to be colonized than patches of lower quality. Populations in high-quality patches were less likely to become extinct. In addition, extinction in a patch was strongly associated with local population size but not with patch size, which means the latter may not be a good surrogate of population size in assessments of extinction probability. Our results suggest that habitat quality may be a primary driver of patch-occupancy dynamics and may increase the accuracy of models of population survival. We encourage comparisons of competing models that assess occupancy, colonization, and extinction probabilities in a single analytical framework (e.g., dynamic occupancy models) so as to shed light on the association of habitat quality and patch geometry with colonization and extinction processes in different settings and species. ©2012 Society for Conservation Biology.

  15. Large-scale experimental landscapes reveal distinctive effects of patch shape and connectivity on arthropod communities.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Orrock, John, L.; Curler, Gregory, R.; Danielson, Brent, J.

    2011-09-14

    The size, shape, and isolation of habitat patches can affect organism behavior and population dynamics, but little is known about the relative role of shape and connectivity in affecting ecological communities at large spatial scales. Using six sampling sessions from July 2001 until August 2002, we collected 33,685 arthropods throughout seven 12-ha experimental landscapes consisting of clear-cut patches surrounded by a matrix of mature pine forest. Patches were explicitly designed to manipulate connectivity (via habitat corridors) independently of area and edge effects. We found that patch shape, rather than connectivity, affected ground-dwelling arthropod richness and beta diversity (i.e. turnover ofmore » genera among patches). Arthropod communities contained fewer genera and exhibited less turnover in high-edge connected and high-edge unconnected patches relative to low-edge unconnected patches of similar area. Connectivity, rather than patch shape, affected the evenness of ground-dwelling arthropod communities; regardless of patch shape, high-edge connected patches had lower evenness than low- or high-edge unconnected patches. Among the most abundant arthropod orders, increased richness in low-edge unconnected patches was largely due to increased richness of Coleoptera, whereas Hymenoptera played an important role in the lower evenness in connected patches and patterns of turnover. These findings suggest that anthropogenic habitat alteration can have distinct effects on ground-dwelling arthropod communities that arise due to changes in shape and connectivity. Moreover, this work suggests that corridors, which are common conservation tools that change both patch shape and connectivity, can have multiple effects on arthropod communities via different mechanisms, and each effect may alter components of community structure.« less

  16. Effects of Spatial Patch Arrangement and Scale of Covarying Resources on Growth and Intraspecific Competition of a Clonal Plant

    PubMed Central

    Wang, Yong-Jian; Shi, Xue-Ping; Meng, Xue-Feng; Wu, Xiao-Jing; Luo, Fang-Li; Yu, Fei-Hai

    2016-01-01

    Spatial heterogeneity in two co-variable resources such as light and water availability is common and can affect the growth of clonal plants. Several studies have tested effects of spatial heterogeneity in the supply of a single resource on competitive interactions of plants, but none has examined those of heterogeneous distribution of two co-variable resources. In a greenhouse experiment, we grew one (without intraspecific competition) or nine isolated ramets (with competition) of a rhizomatous herb Iris japonica under a homogeneous environment and four heterogeneous environments differing in patch arrangement (reciprocal and parallel patchiness of light and soil water) and patch scale (large and small patches of light and water). Intraspecific competition significantly decreased the growth of I. japonica, but at the whole container level there were no significant interaction effects of competition by spatial heterogeneity or significant effect of heterogeneity on competitive intensity. Irrespective of competition, the growth of I. japonica in the high and the low water patches did not differ significantly in the homogeneous treatments, but it was significantly larger in the high than in the low water patches in the heterogeneous treatments with large patches. For the heterogeneous treatments with small patches, the growth of I. japonica was significantly larger in the high than in the low water patches in the presence of competition, but such an effect was not significant in the absence of competition. Furthermore, patch arrangement and patch scale significantly affected competitive intensity at the patch level. Therefore, spatial heterogeneity in light and water supply can alter intraspecific competition at the patch level and such effects depend on patch arrangement and patch scale. PMID:27375630

  17. Effects of Spatial Patch Arrangement and Scale of Covarying Resources on Growth and Intraspecific Competition of a Clonal Plant.

    PubMed

    Wang, Yong-Jian; Shi, Xue-Ping; Meng, Xue-Feng; Wu, Xiao-Jing; Luo, Fang-Li; Yu, Fei-Hai

    2016-01-01

    Spatial heterogeneity in two co-variable resources such as light and water availability is common and can affect the growth of clonal plants. Several studies have tested effects of spatial heterogeneity in the supply of a single resource on competitive interactions of plants, but none has examined those of heterogeneous distribution of two co-variable resources. In a greenhouse experiment, we grew one (without intraspecific competition) or nine isolated ramets (with competition) of a rhizomatous herb Iris japonica under a homogeneous environment and four heterogeneous environments differing in patch arrangement (reciprocal and parallel patchiness of light and soil water) and patch scale (large and small patches of light and water). Intraspecific competition significantly decreased the growth of I. japonica, but at the whole container level there were no significant interaction effects of competition by spatial heterogeneity or significant effect of heterogeneity on competitive intensity. Irrespective of competition, the growth of I. japonica in the high and the low water patches did not differ significantly in the homogeneous treatments, but it was significantly larger in the high than in the low water patches in the heterogeneous treatments with large patches. For the heterogeneous treatments with small patches, the growth of I. japonica was significantly larger in the high than in the low water patches in the presence of competition, but such an effect was not significant in the absence of competition. Furthermore, patch arrangement and patch scale significantly affected competitive intensity at the patch level. Therefore, spatial heterogeneity in light and water supply can alter intraspecific competition at the patch level and such effects depend on patch arrangement and patch scale.

  18. Comparison of anthropometric indices for predicting the risk of metabolic syndrome and its components in Chinese adults: a prospective, longitudinal study

    PubMed Central

    Wang, Haoyu; Liu, Aihua; Zhao, Tong; Gong, Xun; Pang, Tianxiao; Zhou, Yingying; Xiao, Yue; Yan, Yumeng; Fan, Chenling; Teng, Weiping; Lai, Yaxin; Shan, Zhongyan

    2017-01-01

    Objectives Our study aimed to distinguish the ability of anthropometric indices to assess the risk of metabolic syndrome (MetS). Design Prospective cohort study. Setting Shenyang, China. Participants A total of 379 residents aged between 40 and 65 were enrolled. 253 of them were free of MetS and had been followed up for 4.5 years. Methods At baseline, all the participants underwent a thorough medical examination. A variety of anthropometric parameters were measured and calculated, including waist circumference (WC), body mass index (BMI), a body shape index (ABSI), abdominal volume index (AVI), body adiposity index, body roundness index, conicity index, waist-to-hip ratio and visceral adiposity index (VAI). After 4.5 year follow-up, we re-examined whether participants were suffering from MetS. A receiver operating characteristic (ROC) curve was applied to examine the potential of the above indices to identify the status and risk of MetS. Outcomes Occurrence of MetS. Results At baseline, 33.2% participants suffered from MetS. All of the anthropometric indices showed clinical significance, and VAI was superior to the other indices as it was found to have the largest area under the ROC curve. After a 4.5 year follow-up, 37.8% of men and 23.9% of women developed MetS. ROC curve analysis suggested that baseline BMI was the strongest predictor of MetS for men (0.77 (0.68–0.85)), and AVI was the strongest for women (0.72 (0.64–0.79)). However, no significant difference was observed between WC and both indices. In contrast, the baseline ABSI did not predict MetS in both genders. Conclusions The present study indicated that these different indices derived from anthropometric parameters have different discriminatory abilities for MetS. Although WC did not have the largest area under the ROC curve for diagnosing and predicting MetS, it may remain a better index of MetS status and risk because of its simplicity and wide use. PMID:28928179

  19. 14 CFR 139.325 - Airport emergency plan.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... response for the largest air carrier aircraft in the Index group required under § 139.315. (b) The plan... 14 Aeronautics and Space 3 2011-01-01 2011-01-01 false Airport emergency plan. 139.325 Section 139.325 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION (CONTINUED...

  20. 14 CFR 139.325 - Airport emergency plan.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... response for the largest air carrier aircraft in the Index group required under § 139.315. (b) The plan... 14 Aeronautics and Space 3 2014-01-01 2014-01-01 false Airport emergency plan. 139.325 Section 139.325 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION (CONTINUED...

  1. 14 CFR 139.325 - Airport emergency plan.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... response for the largest air carrier aircraft in the Index group required under § 139.315. (b) The plan... 14 Aeronautics and Space 3 2013-01-01 2013-01-01 false Airport emergency plan. 139.325 Section 139.325 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION (CONTINUED...

  2. PATCH image processor user's manual

    NASA Technical Reports Server (NTRS)

    Nieves, M. J. (Principal Investigator)

    1980-01-01

    The patch image processor extracts patches in various size (32 x 32, 64 x 64, 128 x 128, and 256 x 256 pixels) from full frame LANDSAT imagery data. With the patches that are extracted, a patch image mosaic is created in the image processing system, IMDACS, format.

  3. Resource concentration hypothesis: effect of host plant patch size on density of herbivorous insects.

    PubMed

    Grez, A A; González, R H

    1995-09-01

    The resource concentration hypothesis (Root 1973) predicts that specialist herbivorous insects should be more abundant in large patches of host plants, because the insects are more likely to find and stay longer in those patches. Between August 1989 and January 1990 we experimentally tested Root's hypothesis by analyzing the numerical response of four species of herbivorous insects associated with patches of 4, 16, 64 and 225 cabbage plants, Brassica oleracea var. capitata. In addition, we studied the colonization of patches by adults of Plutella xylostella (L.) (Lepidoptera: Plutellidae), and the migration of their larvae in patches of different sizes. No herbivorous insect densities differed significantly with patch size. Adults of P. xylostella colonized all kind of patches equally. Larvae did not migrate between patches, and their disappearance rate did not differ between patches. The resource concentration hypothesis is organism-dependent, being a function of the adult and juvenile herbivore dispersal behavior in relation to the spatial scale of patchiness.

  4. Periodic creation of polar cap patches from auroral transients in the cusp

    NASA Astrophysics Data System (ADS)

    Hosokawa, K.; Taguchi, S.; Ogawa, Y.

    2016-06-01

    On 24 November 2012, an interval of polar cap patches was identified by an all-sky airglow imager located near the dayside cusp. During the interval, the successive appearance of poleward moving auroral forms (PMAFs) was detected, which are known to represent ionospheric manifestations of pulsed magnetic reconnections at the dayside magnetopause. All of the patches observed during the interval appeared from these transient auroral features (i.e., there was a one-to-one correspondence between PMAFs and newly created baby patches). This fact strongly suggests that patches can be directly and seamlessly created from a series of PMAFs. The optical intensities of the baby patches were 100-150 R, which is slightly lower than typical patch luminosity on the nightside and may imply that PMAF-induced patches are generally low density. The generation of such patches could be explained by impact ionization due to soft particle precipitation into PMAFs traces. In spite of the faint signature of the baby patches, two coherent HF radars of the SuperDARN network observed backscatter echoes in the central polar cap, which represented signatures of plasma irregularities associated with the baby patches. These indicate that patches created from PMAFs have the potential to affect the satellite communications environment in the central polar cap region.

  5. Reconfigurable Wideband Circularly Polarized Stacked Square Patch Antenna for Cognitive Radios

    NASA Technical Reports Server (NTRS)

    Barbosa Kortright, Miguel A.; Waldstein, Seth W.; Simons, Rainee N.

    2017-01-01

    An almost square patch, a square patch and a stacked square patch with corner truncation for circular polarization (CP) are researched and developed at X-band for cognitive radios. Experimental results indicate, first, that the impedance bandwidth of a CP almost square patch fed from the edge by a 50 ohm line is 1.70 percent and second, that of a CP square patch fed from the ground plane side by a surface launch connector is 1.87 percent. Third, the impedance bandwidth of a CP stacked square patch fed by a surface launch connector is 2.22 percent. The measured center frequency for the CP square patch fed by a surface launch connector without and with an identical stacked patch is 8.45 and 8.1017 GHz, respectively. By stacking a patch, separated by a fixed air gap of 0.254 mm, the center frequency is observed to shift by as much as 348.3 MHz. The shift in the center frequency can be exploited to reconfigure the operating frequency by mechanically increasing the air gap. The results indicate that a tuning bandwidth of about 100 MHz can be achieved when the distance of separation between the driven patch and the stacked patch is increased from its initial setting of 0.254 to 1.016 mm.

  6. Rapid establishment of a regular distribution of adult tropical Drosophila parasitoids in a multi-patch environment by patch defence behaviour.

    PubMed

    de Jong, Peter W; Hemerik, Lia; Gort, Gerrit; van Alphen, Jacques J M

    2011-01-01

    Females of the larval parasitoid of Drosophila, Asobara citri, from sub-Saharan Africa, defend patches with hosts by fighting and chasing conspecific females upon encounter. Females of the closely related, palearctic species Asobara tabida do not defend patches and often search simultaneously in the same patch. The effect of patch defence by A. citri females on their distribution in a multi-patch environment was investigated, and their distributions were compared with those of A. tabida. For both species 20 females were released from two release-points in replicate experiments. Females of A. citri quickly reached a regular distribution across 16 patches, with a small variance/mean ratio per patch. Conversely, A. tabida females initially showed a clumped distribution, and after gradual dispersion, a more Poisson-like distribution across patches resulted (variance/mean ratio was closer to 1 and higher than for A. citri). The dispersion of A. tabida was most probably an effect of exploitation: these parasitoids increasingly made shorter visits to already exploited patches. We briefly discuss hypotheses on the adaptive significance of patch defence behaviour or its absence in the light of differences in the natural history of both parasitoid species, notably the spatial distribution of their hosts.

  7. Effect of patch borders on coercivity in amorphous rare earth-transition metal thin films

    NASA Technical Reports Server (NTRS)

    Patterson, G.; Fu, H.; Giles, R. C.; Mansuripur, M.

    1991-01-01

    The coercivity at the micron scale is a very important property of magneto-optical media. It is a key factor that determines the magnetic domain wall movement and domain reversal. How the coercivity is influenced by a special type of patch borders is discussed. Patch formation is a general phenomenon in growth processes of amorphous rare earth transition metal thin films. Different patches may stem from different seeds and the patch borders are formed when they merge. Though little is known about the exact properties of the borders, we may expect that the exchange interaction at the patch border is weaker than that within a patch, since there is usually a spatial gap between two patches. Computer simulations were performed on a 2-D hexagonal lattice consisting of 37 complete patches with random shape and size. From the series of simulations we may conclude that the domain in the patch with borders of 30 percent exchange strength can expand most easily to the whole lattice, because the exchange strength can expand most easily to the whole lattice, because the exchange strength of the border is not too high to prevent the domain from growing within the patch and it is not too low to prevent the domain from expanding beyond the patch.

  8. Departure Mechanisms for Host Search on High-Density Patches by the Meteorus pulchricornis

    PubMed Central

    Sheng, Sheng; Feng, Sufang; Meng, Ling; Li, Baoping

    2014-01-01

    Abstract Less attention has been paid to the parasitoid–host system in which the host occurs in considerably high density with a hierarchical patch structure in studies on time allocation strategies of parasitoids. This study used the parasitoid Meteorus pulchricornis (Wesmael) (Hymenoptera: Braconidae) and the Oriental leafworm, Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae) as the parasitoids–host model system to investigate patch-leaving mechanisms as affected by the high-host density, hierarchical patch structure, and foraging behaviors on both former and current patches. The results showed that three out of eight covariates tested had significant effects on the patch-leaving tendency, including the host density, ovipositor insertion, and host rejection on the current patch. The parasitoid paid more visits to the patch with high-density hosts. While the patch with higher host densities decreased the leaving tendency, the spatial distribution of hosts examined had no effect on the leaving tendency. Both oviposition and host rejection decreased the patch-leaving tendency. The variables associated with the former patch, such as the host density and number of ovipositor insertions, however, did not have an effect on the leaving tendency. Our study suggested that M. pulchricornis females may use an incremental mechanism to exploit high-density patches to the fullest. PMID:25502040

  9. Nevirapine patch testing in Thai human immunodeficiency virus infected patients with nevirapine drug hypersensitivity.

    PubMed

    Prasertvit, Piyatida; Chareonyingwattana, Angkana; Wattanakrai, Penpun

    2017-12-01

    Antiretroviral drug hypersensitivity in HIV patients is common. Publications have shown that Abacavir (ABC) patch testing is useful in confirming ABC hypersensitivity in 24-50% of cases with a 100% sensitivity of HLA-B*5701 in patch test positive cases. However, Nevirapine (NVP) patch testing has not been reported. (1) To evaluate the usefulness and safety of NVP patch testing in Thai HIV patients with NVP hypersensitivity. (2) To assess the correlation of positive patch tests with HLA-B*3505. Patients were classified into two groups: (1) study group of 20 HIV NVP hypersensitivity patients and (2) control group of 15 volunteers without NVP hypersensitivity. Both groups were patch tested with purified and commercialized form of NVP in various vehicles. Two HIV patients with NVP hypersensitivity were patch test positive. All controls tested negative. Three HIV patients were positive for HLA-B*3505 and the two patients with positive patch testing were both HLA-B*3505 positive. NVP patch testing in Thai HIV patients is safe and can be used to help confirm the association between NVP and hypersensitivity skin reactions. NVP patch test results significantly correlated with HLA-B*3505. The sensitivity of HLA-B*3505 for positive patch test was 100%. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  10. A Recent Advance in the Automatic Indexing of the Biomedical Literature

    PubMed Central

    Névéol, Aurélie; Shooshan, Sonya E.; Humphrey, Susanne M.; Mork, James G.; Aronson, Alan R.

    2009-01-01

    The volume of biomedical literature has experienced explosive growth in recent years. This is reflected in the corresponding increase in the size of MEDLINE®, the largest bibliographic database of biomedical citations. Indexers at the U.S. National Library of Medicine (NLM) need efficient tools to help them accommodate the ensuing workload. After reviewing issues in the automatic assignment of Medical Subject Headings (MeSH® terms) to biomedical text, we focus more specifically on the new subheading attachment feature for NLM’s Medical Text Indexer (MTI). Natural Language Processing, statistical, and machine learning methods of producing automatic MeSH main heading/subheading pair recommendations were assessed independently and combined. The best combination achieves 48% precision and 30% recall. After validation by NLM indexers, a suitable combination of the methods presented in this paper was integrated into MTI as a subheading attachment feature producing MeSH indexing recommendations compliant with current state-of-the-art indexing practice. PMID:19166973

  11. Age-related changes in the anatomical characteristics of Peyer's patches in small intestine of Bactrian camels (Camelus bactrianus).

    PubMed

    Qi, Shan-Shan; Wang, Wen-Hui; Gao, Qiang; Xu, Xiao-Hong; He, Wan-Hong; Zhaxi, Ying-Pai; Tai, Li-Feng

    2011-08-01

    The distribution, size, and appearance of Peyer's patches vary according to species. In order to determine the anatomical characteristics of Peyer's patches in small intestine of Bactrian camel, and age-related changes in the number of Peyer's patches, 40 Bactrian camels of the following four age groups were studied: young (0.5-2 years), pubertal (3-5 years), middle-aged (6-16 years), and old (17-20 years). The exact number of Peyer's patches was recorded, and the appearance of Peyer's patches was described in detail. The results indicated that Peyer's patches of Bactrian camels not only have a particular anatomical location and distinct appearance but also change with age. They were distributed in the whole small intestine and there were four distinct types of Peyer's patches: nodular, faviform, cup-shaped, and cystic form Peyer's patches. However, the nodular and cystic form Peyer's patches are specific to Bactrian camel, which have not been found in other animals including Dromedary camel. In addition, the distribution density of Peyer's patches in ileum was the maximum, then was jejunum and duodenum. Further statistical analysis showed that the number of Peyer's patches was altered with age. The number peaked in 5-year-old camels and declined subsequently with age. However, there was little change in the size of Peyer's patches in different age groups; no age-related macroscopic variations in the shape or size of the Peyer's patches were found. Results obtained from this study provide the basic information to further study on the gastrointestinal mucosal immunity of Bactrian camel.

  12. Single-layer dual frequency patch antenna

    NASA Astrophysics Data System (ADS)

    Maci, S.; Gentili, G. B.; Avitabile, G.

    1993-08-01

    A configuration for a slotted patch antenna is introduced which allows two separate operating frequencies. Both of these frequencies are associated with a radiating mode almost identical to that of a standard patch. The two resonances are related to the patch width and the slot/patch length, respectively.

  13. Impacts of transportation routes on landscape diversity: a comparison of different route types and their combined effects.

    PubMed

    Su, Shiliang; Xiao, Rui; Li, Delong; Hu, Yi'na

    2014-03-01

    A comparison of different transportation route types and their combined effects on landscape diversity was conducted within Tiaoxi watershed (China) between 1994 and 2005. Buffer analysis and Mann-Kendall's test were used to quantify the relationships between distance from transportation routes (railway, highway, national, and provincial road) and a family of landscape diversity parameters (Simpson's diversity index, Simpson's evenness index, Shannon's diversity index, and Shannon's evenness index). One-way ANOVA was further applied to compare influences from different route types and their combined effects. Five other landscape metrics (patch density, edge density, area-weighted mean shape index, connectance index, and Euclidean nearest neighbor distance) were also calculated to analyze the associations between landscape diversity and landscape pattern characteristics. Results showed that transportation routes exerted significant impacts on landscape diversity. Impact from railway was comparable to that from highway and national road but was more significant than that from provincial road. The spatial influential range of railway and national road was wider than that of highway and provincial road. Combined effects of routes were nonlinear, and impacts from different route types were more complex than those from the same type. The four landscape diversity metrics were comparably effective at the buffer zone scale. In addition, landscape diversity can be alternatively used to indicate fragmentation, connectivity, and isolation at route buffer scale. This study demonstrates an applicable approach to quantitatively characterize the impacts from transportation routes on landscape patterns and has potential to facilitate route network planning.

  14. On the cellular site of two-pore channel TPC1 action in the Poaceae.

    PubMed

    Dadacz-Narloch, Beata; Kimura, Sachie; Kurusu, Takamitsu; Farmer, Edward E; Becker, Dirk; Kuchitsu, Kazuyuki; Hedrich, Rainer

    2013-11-01

    The slow vacuolar (SV) channel has been characterized in different dicots by patch-clamp recordings. This channel represents the major cation conductance of the largest organelle in most plant cells. Studies with the tpc1-2 mutant of the model dicot plant Arabidopsis thaliana identified the SV channel as the product of the TPC1 gene. By contrast, research on rice and wheat TPC1 suggested that the monocot gene encodes a plasma membrane calcium-permeable channel. To explore the site of action of grass TPC1 channels, we expressed OsTPC1 from rice (Oryza sativa) and TaTPC1 from wheat (Triticum aestivum) in the background of the Arabidopsis tpc1-2 mutant. Cross-species tpc1 complementation and patch-clamping of vacuoles using Arabidopsis and rice tpc1 null mutants documented that both monocot TPC1 genes were capable of rescuing the SV channel deficit. Vacuoles from wild-type rice but not the tpc1 loss-of-function mutant harbor SV channels exhibiting the hallmark properties of dicot TPC1/SV channels. When expressed in human embryonic kidney (HEK293) cells OsTPC1 was targeted to Lysotracker-Red-positive organelles. The finding that the rice TPC1, just like those from the model plant Arabidopsis and even animal cells, is localized and active in lyso-vacuolar membranes associates this cation channel species with endomembrane function. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  15. An Unprecedented Aggregation of Whale Sharks, Rhincodon typus, in Mexican Coastal Waters of the Caribbean Sea

    PubMed Central

    de la Parra Venegas, Rafael; Hueter, Robert; González Cano, Jaime; Tyminski, John; Gregorio Remolina, José; Maslanka, Mike; Ormos, Andrea; Weigt, Lee; Carlson, Bruce; Dove, Alistair

    2011-01-01

    Whale sharks, Rhincodon typus, are often perceived as solitary behemoths that live and feed in the open ocean. To the contrary, evidence is accumulating that they are gregarious and form seasonal aggregations in some coastal waters. One such aggregation occurs annually north of Cabo Catoche, off Isla Holbox on the Yucatán Peninsula of Mexico. Here we report a second, much denser aggregation of whale sharks (dubbed “the Afuera”) that occurs east of the tip of the Yucatán Peninsula in the Caribbean Sea. The 2009 Afuera event comprised the largest aggregation of whale sharks ever reported, with up to 420 whale sharks observed in a single aerial survey, all gathered in an elliptical patch of ocean approximately 18 km2. Plankton studies indicated that the sharks were feeding on dense homogenous patches of fish eggs, which DNA barcoding analysis identified as belonging to little tunny, Euthynnus alletteratus. This contrasts with the annual Cabo Catoche aggregation nearby, where prey consists mostly of copepods and sergestid shrimp. Increased sightings at the Afuera coincide with decreased sightings at Cabo Catoche, and both groups have the same sex ratio, implying that the same animals are likely involved in both aggregations; tagging data support this idea. With two whale shark aggregation areas, high coastal productivity and a previously-unknown scombrid spawning ground, the northeastern Yucatán marine region is a critical habitat that deserves more concerted conservation efforts. PMID:21559508

  16. Negative density-distribution relationship in butterflies.

    PubMed

    Päivinen, Jussi; Grapputo, Alessandro; Kaitala, Veijo; Komonen, Atte; Kotiaho, Janne S; Saarinen, Kimmo; Wahlberg, Niklas

    2005-03-01

    Because "laws of nature" do not exist in ecology, much of the foundations of community ecology rely on broad statistical generalisations. One of the strongest generalisations is the positive relationship between density and distribution within a given taxonomic assemblage; that is, locally abundant species are more widespread than locally sparse species. Several mechanisms have been proposed to create this positive relationship, and the testing of these mechanisms is attracting increasing attention. We report a strong, but counterintuitive, negative relationship between density and distribution in the butterfly fauna of Finland. With an exceptionally comprehensive data set (data includes all 95 resident species in Finland and over 1.5 million individuals), we have been able to submit several of the mechanisms to powerful direct empirical testing. Without exception, we failed to find evidence for the proposed mechanisms creating a positive density-distribution relationship. On the contrary, we found that many of the mechanisms are equally able to generate a negative relationship. We suggest that one important determinant of density-distribution relationships is the geographical location of the study: on the edge of a distribution range, suitable habitat patches are likely to be more isolated than in the core of the range. In such a situation, only the largest and best quality patches are likely to be occupied, and these by definition can support a relatively dense population leading to a negative density-distribution relationship. Finally, we conclude that generalizations about the positive density-distribution relationship should be made more cautiously.

  17. Some news from the unknown soldier, the Peyer's patch macrophage.

    PubMed

    Wagner, Camille; Bonnardel, Johnny; Da Silva, Clément; Martens, Liesbet; Gorvel, Jean-Pierre; Lelouard, Hugues

    2018-01-31

    In mammals, macrophages (MF) are present in virtually all tissues where they serve many different functions linked primarily to the maintenance of homeostasis, innate defense against pathogens, tissue repair and metabolism. Although some of these functions appear common to all tissues, others are specific to the homing tissue. Thus, MF become adapted to perform particular functions in a given tissue. Accordingly, MF express common markers but also sets of tissue-specific markers linked to dedicated functions. One of the largest pool of MF in the body lines up the wall of the gut. Located in the small intestine, Peyer's patches (PP) are primary antigen sampling and mucosal immune response inductive sites. Surprisingly, although markers of intestinal MF, such as F4/80, have been identified more than 30 years ago, MF of PP escaped any kind of phenotypic description and remained "unknown" for decades. In absence of MF identification, the characterization of the PP mononuclear phagocyte system (MPS) functions has been impaired. However, taking into account that PP are privileged sites of entry for pathogens, it is important to understand how the latter are handled by and/or escape the PP MPS, especially MF, which role in killing invaders is well known. This review focuses on recent advances on the PP MPS, which have allowed, through new criteria of PP phagocyte subset identification, the characterization of PP MF origin, diversity, specificity, location and functions. Copyright © 2018 Elsevier Inc. All rights reserved.

  18. Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.

    PubMed

    Bortoluzzi, Alessio; Amato, Anastasia; Lucas, Xavier; Blank, Manuel; Ciulli, Alessio

    2017-05-04

    The plant homeodomain (PHD) fingers are among the largest family of epigenetic domains, first characterized as readers of methylated H3K4. Readout of histone post-translational modifications by PHDs has been the subject of intense investigation; however, less is known about the recognition of secondary structure features within the histone tail itself. We solved the crystal structure of the PHD finger of the bromodomain adjacent to zinc finger 2A [BAZ2A, also known as TIP5 (TTF-I/interacting protein 5)] in complex with unmodified N-terminal histone H3 tail. The peptide is bound in a helical folded-back conformation after K4, induced by an acidic patch on the protein surface that prevents peptide binding in an extended conformation. Structural bioinformatics analyses identify a conserved Asp/Glu residue that we name 'acidic wall', found to be mutually exclusive with the conserved Trp for K4Me recognition. Neutralization or inversion of the charges at the acidic wall patch in BAZ2A, and homologous BAZ2B, weakened H3 binding. We identify simple mutations on H3 that strikingly enhance or reduce binding, as a result of their stabilization or destabilization of H3 helicity. Our work unravels the structural basis for binding of the helical H3 tail by PHD fingers and suggests that molecular recognition of secondary structure motifs within histone tails could represent an additional layer of regulation in epigenetic processes. © 2017 The Author(s).

  19. Negative density-distribution relationship in butterflies

    PubMed Central

    Päivinen, Jussi; Grapputo, Alessandro; Kaitala, Veijo; Komonen, Atte; Kotiaho, Janne S; Saarinen, Kimmo; Wahlberg, Niklas

    2005-01-01

    Background Because "laws of nature" do not exist in ecology, much of the foundations of community ecology rely on broad statistical generalisations. One of the strongest generalisations is the positive relationship between density and distribution within a given taxonomic assemblage; that is, locally abundant species are more widespread than locally sparse species. Several mechanisms have been proposed to create this positive relationship, and the testing of these mechanisms is attracting increasing attention. Results We report a strong, but counterintuitive, negative relationship between density and distribution in the butterfly fauna of Finland. With an exceptionally comprehensive data set (data includes all 95 resident species in Finland and over 1.5 million individuals), we have been able to submit several of the mechanisms to powerful direct empirical testing. Without exception, we failed to find evidence for the proposed mechanisms creating a positive density-distribution relationship. On the contrary, we found that many of the mechanisms are equally able to generate a negative relationship. Conclusion We suggest that one important determinant of density-distribution relationships is the geographical location of the study: on the edge of a distribution range, suitable habitat patches are likely to be more isolated than in the core of the range. In such a situation, only the largest and best quality patches are likely to be occupied, and these by definition can support a relatively dense population leading to a negative density-distribution relationship. Finally, we conclude that generalizations about the positive density-distribution relationship should be made more cautiously. PMID:15737240

  20. The spatial distribution of earthquake stress rotations following large subduction zone earthquakes

    USGS Publications Warehouse

    Hardebeck, Jeanne L.

    2017-01-01

    Rotations of the principal stress axes due to great subduction zone earthquakes have been used to infer low differential stress and near-complete stress drop. The spatial distribution of coseismic and postseismic stress rotation as a function of depth and along-strike distance is explored for three recent M ≥ 8.8 subduction megathrust earthquakes. In the down-dip direction, the largest coseismic stress rotations are found just above the Moho depth of the overriding plate. This zone has been identified as hosting large patches of large slip in great earthquakes, based on the lack of high-frequency radiated energy. The large continuous slip patches may facilitate near-complete stress drop. There is seismological evidence for high fluid pressures in the subducted slab around the Moho depth of the overriding plate, suggesting low differential stress levels in this zone due to high fluid pressure, also facilitating stress rotations. The coseismic stress rotations have similar along-strike extent as the mainshock rupture. Postseismic stress rotations tend to occur in the same locations as the coseismic stress rotations, probably due to the very low remaining differential stress following the near-complete coseismic stress drop. The spatial complexity of the observed stress changes suggests that an analytical solution for finding the differential stress from the coseismic stress rotation may be overly simplistic, and that modeling of the full spatial distribution of the mainshock static stress changes is necessary.

  1. A study of tensile residual strength of composite laminates under different patch-repaired series

    NASA Astrophysics Data System (ADS)

    Ding, M. H.; zhan, S.; Tang, Y. H.; Wang, L.; Ma, D. Q.; Wang, R. G.

    2017-09-01

    The tensile behavior of composite laminate structures repaired by bonding external patches was studied in the paper. Two different types of patches including wedge patches and inverted wedge patches were used and failure mechanisms, failure load and strength predictions were studied. A convenient and fast method of building 2-D finite element modeling (FEM) of laminate structure repaired was proposed and the strength of repaired laminate structures was calculated by FEM. The results showed that more than 80% tensile strength of the undamaged laminate could be recovered by bonding patch repairs. Moreover, the results indicated that the strength of inverted wedge patches repair were higher than that of wedge patches repair. FEM simulation results indicated that high stress concentration was found along the edges of invert patches and the most weakness part located in the adhesive bondline. FEM analysis results showed that the strength predicted matched well with the test strength.

  2. The art and science of mission patches and their origins in society

    NASA Astrophysics Data System (ADS)

    Brumfitt, A.; Thompson, L. A.; Raitt, D.

    2008-06-01

    Space exploration utilizes some of the latest and highest technology available to human kind; synonymous with space exploration is the mission patch. This specialized art form popularizes the exploration of space with millions of mission patches sold around the world. Space tourism and education centres like the Kennedy Space Centre rely heavily on each space shuttle launch to support their merchandising of mission patches, from the traditional sew on badge to T shirts. Do mission patches tell a story? Are they Art? What is the origin and role of this art form in society? The art form of space mission patches combines the 21st century relevance with heraldic origins predating the ninth century. The space mission patch is designed by the astronauts themselves if it is a manned mission. As an education tool teachers and educators use the space mission patch to engage their students in the excitement of space exploration, the mission patch design is utilized as an education tool in literature, science and art. The space mission patch is a particularly powerful message medium. This paper looks at the origins of the space mission patch, its relevance to art and its impact on society.

  3. Invertebrate community response to a shifting mosaic of habitat

    USGS Publications Warehouse

    Engle, David M.; Fuhlendorf, S.D.; Roper, A.; Leslie, David M.

    2008-01-01

    Grazing management has focused largely on promoting vegetation homogeneity through uniform distribution of grazing to minimize area in a pasture that is either heavily disturbed or undisturbed. An alternative management model that couples grazing and fire (i.e., patch burning) to promote heterogeneity argues that grazing and fire interact through a series of positive and negative feedbacks to cause a shifting mosaic of vegetation composition and structure across the landscape. We compared patch burning with traditional homogeneity-based management in tallgrass prairie to determine the influence of the two treatments on the aboveground invertebrate community. Patch burning resulted in a temporal flush of invertebrate biomass in patches transitional between unburned and patches burned in the current year. Total invertebrate mass was about 50% greater in these transitional patches within patch-burned pastures as compared to pastures under traditional, homogeneity-based management. Moreover, the mosaic of patches in patch-burned pastures contained a wider range of invertebrate biomass and greater abundance of some invertebrate orders than did the traditionally managed pastures. Patch burning provides habitat that meets requirements for a broad range of invertebrate species, suggesting the potential for patch burning to benefit other native animal assemblages in the food chain.

  4. The effect of travel loss on evolutionarily stable distributions of populations in space.

    PubMed

    Deangelis, Donald L; Wolkowicz, Gail S K; Lou, Yuan; Jiang, Yuexin; Novak, Mark; Svanbäck, Richard; Araújo, Márcio S; Jo, Youngseung; Cleary, Erin A

    2011-07-01

    A key assumption of the ideal free distribution (IFD) is that there are no costs in moving between habitat patches. However, because many populations exhibit more or less continuous population movement between patches and traveling cost is a frequent factor, it is important to determine the effects of costs on expected population movement patterns and spatial distributions. We consider a food chain (tritrophic or bitrophic) in which one species moves between patches, with energy cost or mortality risk in movement. In the two-patch case, assuming forced movement in one direction, an evolutionarily stable strategy requires bidirectional movement, even if costs during movement are high. In the N-patch case, assuming that at least one patch is linked bidirectionally to all other patches, optimal movement rates can lead to source-sink dynamics where patches with negative growth rates are maintained by other patches with positive growth rates. As well, dispersal between patches is not balanced (even in the two-patch case), leading to a deviation from the IFD. Our results indicate that cost-associated forced movement can have important consequences for spatial metapopulation dynamics. Relevance to marine reserve design and the study of stream communities subject to drift is discussed.

  5. PL-PatchSurfer: a novel molecular local surface-based method for exploring protein-ligand interactions.

    PubMed

    Hu, Bingjie; Zhu, Xiaolei; Monroe, Lyman; Bures, Mark G; Kihara, Daisuke

    2014-08-27

    Structure-based computational methods have been widely used in exploring protein-ligand interactions, including predicting the binding ligands of a given protein based on their structural complementarity. Compared to other protein and ligand representations, the advantages of a surface representation include reduced sensitivity to subtle changes in the pocket and ligand conformation and fast search speed. Here we developed a novel method named PL-PatchSurfer (Protein-Ligand PatchSurfer). PL-PatchSurfer represents the protein binding pocket and the ligand molecular surface as a combination of segmented surface patches. Each patch is characterized by its geometrical shape and the electrostatic potential, which are represented using the 3D Zernike descriptor (3DZD). We first tested PL-PatchSurfer on binding ligand prediction and found it outperformed the pocket-similarity based ligand prediction program. We then optimized the search algorithm of PL-PatchSurfer using the PDBbind dataset. Finally, we explored the utility of applying PL-PatchSurfer to a larger and more diverse dataset and showed that PL-PatchSurfer was able to provide a high early enrichment for most of the targets. To the best of our knowledge, PL-PatchSurfer is the first surface patch-based method that treats ligand complementarity at protein binding sites. We believe that using a surface patch approach to better understand protein-ligand interactions has the potential to significantly enhance the design of new ligands for a wide array of drug-targets.

  6. PL-PatchSurfer: A Novel Molecular Local Surface-Based Method for Exploring Protein-Ligand Interactions

    PubMed Central

    Hu, Bingjie; Zhu, Xiaolei; Monroe, Lyman; Bures, Mark G.; Kihara, Daisuke

    2014-01-01

    Structure-based computational methods have been widely used in exploring protein-ligand interactions, including predicting the binding ligands of a given protein based on their structural complementarity. Compared to other protein and ligand representations, the advantages of a surface representation include reduced sensitivity to subtle changes in the pocket and ligand conformation and fast search speed. Here we developed a novel method named PL-PatchSurfer (Protein-Ligand PatchSurfer). PL-PatchSurfer represents the protein binding pocket and the ligand molecular surface as a combination of segmented surface patches. Each patch is characterized by its geometrical shape and the electrostatic potential, which are represented using the 3D Zernike descriptor (3DZD). We first tested PL-PatchSurfer on binding ligand prediction and found it outperformed the pocket-similarity based ligand prediction program. We then optimized the search algorithm of PL-PatchSurfer using the PDBbind dataset. Finally, we explored the utility of applying PL-PatchSurfer to a larger and more diverse dataset and showed that PL-PatchSurfer was able to provide a high early enrichment for most of the targets. To the best of our knowledge, PL-PatchSurfer is the first surface patch-based method that treats ligand complementarity at protein binding sites. We believe that using a surface patch approach to better understand protein-ligand interactions has the potential to significantly enhance the design of new ligands for a wide array of drug-targets. PMID:25167137

  7. Patch testing in children from 2005 to 2012: results from the North American contact dermatitis group.

    PubMed

    Zug, Kathryn A; Pham, Anh Khoa; Belsito, Donald V; DeKoven, Joel G; DeLeo, Vincent A; Fowler, Joseph F; Fransway, Anthony F; Maibach, Howard I; Marks, James G; Mathias, C G Toby; Pratt, Melanie D; Sasseville, Denis; Storrs, Frances J; Taylor, James S; Warshaw, Erin M; Zirwas, Matthew J

    2014-01-01

    Allergic contact dermatitis is common in children. Epicutaneous patch testing is an important tool for identifying responsible allergens. The objective of this study was to provide the patch test results from children (aged ≤18 years) examined by the North American Contact Dermatitis Group from 2005 to 2012. This is a retrospective analysis of children patch-tested with the North American Contact Dermatitis Group 65- or 70-allergen series. Frequencies and counts were compared with previously published data (2001-2004) using χ statistics. A total of 883 children were tested during the study period. A percentage of 62.3% had ≥1 positive patch test and 56.7% had ≥1 relevant positive patch test. Frequencies of positive patch test and relevant positive patch test reaction were highest with nickel sulfate (28.1/25.6), cobalt chloride (12.3/9.1), neomycin sulfate (7.1/6.6), balsam of Peru (5.7/5.5), and lanolin alcohol 50% petrolatum vehicle (5.5/5.1). The ≥1 positive patch test and ≥1 relevant positive patch test in the children did not differ significantly from adults (≥19 years) or from previously tested children (2001-2004). The percentage of clinically relevant positive patch tests for 27 allergens differed significantly between the children and adults. A total of 23.6% of children had a relevant positive reaction to at least 1 supplemental allergen. Differences in positive patch test and relevant positive patch test frequencies between children and adults as well as test periods confirm the importance of reporting periodic updates of patch testing in children to enhance clinicians' vigilance to clinically important allergens.

  8. Aortic valve repair with autologous pericardial patch.

    PubMed

    Lausberg, Henning F; Aicher, Diana; Langer, Frank; Schäfers, Hans-Joachim

    2006-08-01

    Isolated aortic valve repair (AVR) has been gaining increasing interest in recent times. Results of isolated aortic valve repair have been reported to be variable. Various techniques have been utilized. We analyzed our experience with isolated valve repair using autologous pericardial patch plasty and compared the results to an age-matched collective with aortic valve repair without the use of additional material. Between January 1997 and June 2005, pericardial patch plasty of the aortic valve was performed in 42 patients (PATCH). During the same period, 42 patients after AVR without the use of additional material were age matched (NO-PATCH). Mean age in both groups was 52 years with a majority of male patients (PATCH ratio, 3.7:1; NO-PATCH ratio, 5:1). Valve anatomy was similar in both groups. All patients were followed by echocardiography for a cumulative follow-up of 2341 patient months (mean 28+/-23 months). No patient died in the hospital in neither group. The average systolic gradient was 5.9+/-2.2 mmHg in PATCH and 4.8+/-2.1 mmHg in NO-PATCH; p=0.17). Freedom from aortic regurgitation > or = II degrees was 87.8% in PATCH and 95.0% in NO-PATCH after 5 years (p=0.21). Freedom from reoperation was 97.6% in PATCH and 97.4% in NO-PATCH (p=0.96). Aortic regurgitation can be treated effectively by aortic valve repair using pericardial patch plasty. The functional results are satisfactory. With the application of this technique also more complex pathologies of the aortic valve can be addressed adequately thus extending the concept of valve preservation in patients with aortic regurgitation.

  9. Mate choice when males are in patches: optimal strategies and good rules of thumb.

    PubMed

    Hutchinson, John M C; Halupka, Konrad

    2004-11-07

    In standard mate-choice models, females encounter males sequentially and decide whether to inspect the quality of another male or to accept a male already inspected. What changes when males are clumped in patches and there is a significant cost to travel between patches? We use stochastic dynamic programming to derive optimum strategies under various assumptions. With zero costs to returning to a male in the current patch, the optimal strategy accepts males above a quality threshold which is constant whenever one or more males in the patch remain uninspected; this threshold drops when inspecting the last male in the patch, so returns may occur only then and are never to a male in a previously inspected patch. With non-zero within-patch return costs, such a two-threshold rule still performs extremely well, but a more gradual decline in acceptance threshold is optimal. Inability to return at all need not decrease performance by much. The acceptance threshold should also decline if it gets harder to discover the last males in a patch. Optimal strategies become more complex when mean male quality varies systematically between patches or years, and females estimate this in a Bayesian manner through inspecting male qualities. It can then be optimal to switch patch before inspecting all males on a patch, or, exceptionally, to return to an earlier patch. We compare performance of various rules of thumb in these environments and in ones without a patch structure. A two-threshold rule performs excellently, as do various simplifications of it. The best-of-N rule outperforms threshold rules only in non-patchy environments with between-year quality variation. The cutoff rule performs poorly.

  10. Departure mechanisms for host search on high-density patches by the Meteorus pulchricornis.

    PubMed

    Sheng, Sheng; Feng, Sufang; Meng, Ling; Li, Baoping

    2014-01-01

    Less attention has been paid to the parasitoid-host system in which the host occurs in considerably high density with a hierarchical patch structure in studies on time allocation strategies of parasitoids. This study used the parasitoid Meteorus pulchricornis (Wesmael) (Hymenoptera: Braconidae) and the Oriental leafworm, Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae) as the parasitoids-host model system to investigate patch-leaving mechanisms as affected by the high-host density, hierarchical patch structure, and foraging behaviors on both former and current patches. The results showed that three out of eight covariates tested had significant effects on the patch-leaving tendency, including the host density, ovipositor insertion, and host rejection on the current patch. The parasitoid paid more visits to the patch with high-density hosts. While the patch with higher host densities decreased the leaving tendency, the spatial distribution of hosts examined had no effect on the leaving tendency. Both oviposition and host rejection decreased the patch-leaving tendency. The variables associated with the former patch, such as the host density and number of ovipositor insertions, however, did not have an effect on the leaving tendency. Our study suggested that M. pulchricornis females may use an incremental mechanism to exploit high-density patches to the fullest. © The Author 2014. Published by Oxford University Press on behalf of the Entomological Society of America.

  11. Scale-dependent feedbacks between patch size and plant reproduction in desert grassland

    USGS Publications Warehouse

    Svejcar, Lauren N.; Bestelmeyer, Brandon T.; Duniway, Michael C.; James, Darren K.

    2015-01-01

    Theoretical models suggest that scale-dependent feedbacks between plant reproductive success and plant patch size govern transitions from highly to sparsely vegetated states in drylands, yet there is scant empirical evidence for these mechanisms. Scale-dependent feedback models suggest that an optimal patch size exists for growth and reproduction of plants and that a threshold patch organization exists below which positive feedbacks between vegetation and resources can break down, leading to critical transitions. We examined the relationship between patch size and plant reproduction using an experiment in a Chihuahuan Desert grassland. We tested the hypothesis that reproductive effort and success of a dominant grass (Bouteloua eriopoda) would vary predictably with patch size. We found that focal plants in medium-sized patches featured higher rates of grass reproductive success than when plants occupied either large patch interiors or small patches. These patterns support the existence of scale-dependent feedbacks in Chihuahuan Desert grasslands and indicate an optimal patch size for reproductive effort and success in B. eriopoda. We discuss the implications of these results for detecting ecological thresholds in desert grasslands.

  12. Market Correlation Structure Changes Around the Great Crash: A Random Matrix Theory Analysis of the Chinese Stock Market

    NASA Astrophysics Data System (ADS)

    Han, Rui-Qi; Xie, Wen-Jie; Xiong, Xiong; Zhang, Wei; Zhou, Wei-Xing

    The correlation structure of a stock market contains important financial contents, which may change remarkably due to the occurrence of financial crisis. We perform a comparative analysis of the Chinese stock market around the occurrence of the 2008 crisis based on the random matrix analysis of high-frequency stock returns of 1228 Chinese stocks. Both raw correlation matrix and partial correlation matrix with respect to the market index in two time periods of one year are investigated. We find that the Chinese stocks have stronger average correlation and partial correlation in 2008 than in 2007 and the average partial correlation is significantly weaker than the average correlation in each period. Accordingly, the largest eigenvalue of the correlation matrix is remarkably greater than that of the partial correlation matrix in each period. Moreover, each largest eigenvalue and its eigenvector reflect an evident market effect, while other deviating eigenvalues do not. We find no evidence that deviating eigenvalues contain industrial sectorial information. Surprisingly, the eigenvectors of the second largest eigenvalues in 2007 and of the third largest eigenvalues in 2008 are able to distinguish the stocks from the two exchanges. We also find that the component magnitudes of the some largest eigenvectors are proportional to the stocks’ capitalizations.

  13. Current usage and future directions for the bovine pericardial patch.

    PubMed

    Li, Xin; Guo, Yuanyuan; Ziegler, Kenneth R; Model, Lynn S; Eghbalieh, Sammy D D; Brenes, Robert A; Kim, Susun T; Shu, Chang; Dardik, Alan

    2011-05-01

    Bovine pericardium (BP) is widely used in surgery and is commonly used as a patch after arteriotomy in cardiovascular surgery. BP patches have several advantages compared with prosthetic patches, including superior biocompatability, easy handling, less suture line bleeding, and possibly reduced rates of infection. These advantages of BP have led to its common use during carotid endarterectomy (CEA). However, long-term clinical results reported after CEA have suggested several issues that may be related to the patch, including restenosis, pseudoaneurysm formation, infection, fibrosis, calcification, and thrombosis. These complications may diminish the long-term efficacy of CEA and suggest potential areas for improvement of surgical patches. Understanding the mechanisms by which BP heals after patch angioplasty may lead to next generation tissue-engineered patches. Published by Elsevier Inc.

  14. Current usage and future directions for the bovine pericardial patch

    PubMed Central

    Li, Xin; Guo, Yuanyuan; Ziegler, Kenneth; Model, Lynn; Eghbalieh, Sammy D. D.; Brenes, Robert; Kim, Susun; Shu, Chang; Dardik, Alan

    2010-01-01

    Bovine pericardium is widely used in surgery and is commonly used for a patch after arteriotomy during cardiovascular surgery. Bovine pericardial patches have several advantages compared to prosthetic patches, including superior biocompatability, easy handling, less suture line bleeding and possibly reduced rates of infection. These advantages of bovine pericardium have led to its common use during carotid endarterectomy. However, long-term clinical results reported after carotid endarterectomy have suggested several issues that may be related to the patch including restenosis, pseudoaneurysm formation, infection, fibrosis, calcification and thrombosis. These complications may diminish the long-term efficacy of carotid endarterectomy and suggest potential areas for improvement of surgical patches. Understanding the mechanisms by which bovine pericardium heals after patch angioplasty may lead to next generation tissue engineered patches. PMID:21276709

  15. Integrated multiple patch-clamp array chip via lateral cell trapping junctions

    NASA Astrophysics Data System (ADS)

    Seo, J.; Ionescu-Zanetti, C.; Diamond, J.; Lal, R.; Lee, L. P.

    2004-03-01

    We present an integrated multiple patch-clamp array chip by utilizing lateral cell trapping junctions. The intersectional design of a microfluidic network provides multiple cell addressing and manipulation sites for efficient electrophysiological measurements at a number of patch sites. The patch pores consist of openings in the sidewall of a main fluidic channel, and a membrane patch is drawn into a smaller horizontal channel. This device geometry not only minimizes capacitive coupling between the cell reservoir and the patch channel, but also allows simultaneous optical and electrical measurements of ion channel proteins. Evidence of the hydrodynamic placement of mammalian cells at the patch sites as well as measurements of patch sealing resistance is presented. Device fabrication is based on micromolding of polydimethylsiloxane, thus allowing inexpensive mass production of disposable high-throughput biochips.

  16. An Appraisal of the Classic Forest Succession Paradigm with the Shade Tolerance Index

    PubMed Central

    Lienard, Jean; Florescu, Ionut; Strigul, Nikolay

    2015-01-01

    In this paper we revisit the classic theory of forest succession that relates shade tolerance and species replacement and assess its validity to understand patch-mosaic patterns of forested ecosystems of the USA. We introduce a macroscopic parameter called the “shade tolerance index” and compare it to the classic continuum index in southern Wisconsin forests. We exemplify shade tolerance driven succession in White Pine-Eastern Hemlock forests using computer simulations and analyzing approximated chronosequence data from the USDA FIA forest inventory. We describe this parameter across the last 50 years in the ecoregions of mainland USA, and demonstrate that it does not correlate with the usual macroscopic characteristics of stand age, biomass, basal area, and biodiversity measures. We characterize the dynamics of shade tolerance index using transition matrices and delimit geographical areas based on the relevance of shade tolerance to explain forest succession. We conclude that shade tolerance driven succession is linked to climatic variables and can be considered as a primary driving factor of forest dynamics mostly in central-north and northeastern areas in the USA. Overall, the shade tolerance index constitutes a new quantitative approach that can be used to understand and predict succession of forested ecosystems and biogeographic patterns. PMID:25658092

  17. FuncPatch: a web server for the fast Bayesian inference of conserved functional patches in protein 3D structures.

    PubMed

    Huang, Yi-Fei; Golding, G Brian

    2015-02-15

    A number of statistical phylogenetic methods have been developed to infer conserved functional sites or regions in proteins. Many methods, e.g. Rate4Site, apply the standard phylogenetic models to infer site-specific substitution rates and totally ignore the spatial correlation of substitution rates in protein tertiary structures, which may reduce their power to identify conserved functional patches in protein tertiary structures when the sequences used in the analysis are highly similar. The 3D sliding window method has been proposed to infer conserved functional patches in protein tertiary structures, but the window size, which reflects the strength of the spatial correlation, must be predefined and is not inferred from data. We recently developed GP4Rate to solve these problems under the Bayesian framework. Unfortunately, GP4Rate is computationally slow. Here, we present an intuitive web server, FuncPatch, to perform a fast approximate Bayesian inference of conserved functional patches in protein tertiary structures. Both simulations and four case studies based on empirical data suggest that FuncPatch is a good approximation to GP4Rate. However, FuncPatch is orders of magnitudes faster than GP4Rate. In addition, simulations suggest that FuncPatch is potentially a useful tool complementary to Rate4Site, but the 3D sliding window method is less powerful than FuncPatch and Rate4Site. The functional patches predicted by FuncPatch in the four case studies are supported by experimental evidence, which corroborates the usefulness of FuncPatch. The software FuncPatch is freely available at the web site, http://info.mcmaster.ca/yifei/FuncPatch golding@mcmaster.ca Supplementary data are available at Bioinformatics online. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  18. The impact of habitat fragmentation on tsetse abundance on the plateau of eastern Zambia.

    PubMed

    Ducheyne, E; Mweempwa, C; De Pus, C; Vernieuwe, H; De Deken, R; Hendrickx, G; Van den Bossche, P

    2009-09-01

    Tsetse-transmitted human or livestock trypanosomiasis is one of the major constraints to rural development in sub-Saharan Africa. The epidemiology of the disease is determined largely by tsetse fly density. A major factor, contributing to tsetse population density is the availability of suitable habitat. In large parts of Africa, encroachment of people and their livestock resulted in a destruction and fragmentation of such suitable habitat. To determine the effect of habitat change on tsetse density a study was initiated in a tsetse-infested zone of eastern Zambia. The study area represents a gradient of habitat change, starting from a zone with high levels of habitat destruction and ending in an area where livestock and people are almost absent. To determine the distribution and density of the fly, tsetse surveys were conducted throughout the study area in the dry and in the rainy season. Landsat ETM+ imagery covering the study area were classified into four land cover classes (munga, miombo, agriculture and settlements) and two auxiliary spectral classes (clouds and shadow) using a Gaussian Maximum Likelihood Classifier. The classes were regrouped into natural vegetation and agricultural zone. The binary images were overlaid with hexagons to obtain the spatial spectrum of spatial pattern. Hexagonal coverage was selected because of its compact and regular form. To identify scale-specific spatial patterns and associated entomological phenomena, the size of the hexagonal coverage was varied (250 and 500 m). Per coverage, total class area, mean patch size, number of patches and patch size standard deviation were used as fragmentation indices. Based on the fragmentation index values, the study zone was classified using a Partitioning Around Mediods (PAM) method. The number of classes was determined using the Wilks' lambda coefficient. To determine the impact of habitat fragmentation on tsetse abundance, the correlation between the fragmentation indices and the index of apparent density of the flies was determined and habitat changes most affecting tsetse abundance was identified. From this it followed that there is a clear relationship between habitat fragmentation and the abundance of tsetse flies. Heavily fragmented areas have lower numbers of tsetse flies, but when the fragmentation of natural vegetation decreases, the number of tsetse flies increases following a sigmoidal-like curve.

  19. Arbitrarily shaped dual-stacked patch antennas: A hybrid FEM simulation

    NASA Technical Reports Server (NTRS)

    Gong, Jian; Volakis, John L.

    1995-01-01

    A dual-stacked patch antenna is analyzed using a hybrid finite element - boundary integral (FE-BI) method. The metallic patches of the antenna are modeled as perfectly electric conducting (PEC) plates stacked on top of two different dielectric layers. The antenna patches may be of any shape and the lower patch is fed by a coaxial cable from underneath the ground plane or by an aperture coupled microstrip line. The ability of the hybrid FEM technique for the stacked patch antenna characterization will be stressed, and the EM coupling mechanism is also discussed with the aid of the computed near field patterns around the patches.

  20. Scopolamine Transdermal Patch

    MedlinePlus

    ... the adhesive surface of the patch, the clear plastic protective strip should be peeled off and discarded. ... needed, remove the patch and dispose of it. Wrap the patch in tissue or paper to avoid ...

  1. Diclofenac Transdermal Patch

    MedlinePlus

    ... will be applying the patch. Cut open the envelope containing the patches, cutting on the dotted line ... it. Pull apart the zipper seal on the envelope and remove one patch. Reseal the envelope by ...

  2. Monitoring Pregnant Women’s Illicit Opiate and Cocaine Use With Sweat Testing

    PubMed Central

    Brunet, Bertrand R.; Barnes, Allan J.; Choo, Robin E.; Mura, Patrick; Jones, Hendrée E.; Huestis, Marilyn A.

    2011-01-01

    Dependence on illicit drugs during pregnancy is a major public health concern as there may be associated adverse maternal, fetal, and neonatal consequences. Sweat patches (n = 389) were collected from 39 pregnant volunteers who provided written informed consent for this Institutional Review Board-approved protocol and wore patches, replaced approximately weekly, from study entry until delivery. Patches were analyzed for opiates (heroin, 6-acetylmor-phine, 6-acetylcodeine, morphine and codeine) and cocaine (cocaine, benzoylecgonine, ecgonine methyl ester, anhydroecgonine methyl ester) by solid phase extraction and gas chromatography mass spectrometry. Seventy-one percent (276) of collected sweat patches were ≥5 ng per patch (limit of quantification) for one or more analytes. Cocaine was present in 254 (65.3%) patches in concentrations ranging from 5.2 to 11,835 ng per patch with 154 of these high enough to satisfy the proposed Substance Abuse and Mental Health Services Administration guidelines for a confirmatory drug test (25 ng per patch). Interestingly, 6-acetylmorphine was the most prominent opiate analyte documented in 134 patches (34.4%) with 11.3% exceeding the proposed opiate Substance Abuse and Mental Health Services Administration cut-off (25 ng per patch). Heroin was identified in fewer patches (77), but in a similar concentration range (5.3–345.4 ng per patch). Polydrug use was evident by the presence of both cocaine and opiate metabolites in 136 (35.0%) patches. Sweat testing is an effective method for monitoring abstinence or illicit drug use relapse in this high-risk population of pregnant opiate- and/or cocaine-dependent women. PMID:19927046

  3. In vivo results of hydrogel composite pericardial substitutes.

    PubMed

    Blue, M A; Guilbeau, E J; Brandon, T A; Walker, A S; Bjotvedt, G; Fisk, R L

    1991-01-01

    In this study, two improved pericardial patches were developed and evaluated for their efficacy as pericardial substitutes. The patches are composites consisting of a hydrogel (PHEMA) that coats an underlying mesh (either ETFE or PET). Studies were conducted using subcutaneous implants in rats and pericardial patch implants in greyhound dogs. Adhesions between the substitute and pericardium and the epicardium were minimal. The ETFE composite patch caused an unacceptable epicardial reaction. The PET patch results were encouraging; the epicardium was largely unaffected by the patch.

  4. Apparatus and Method for Improving the Gain and Bandwidth of a Microstrip Patch Antenna

    DTIC Science & Technology

    2013-09-30

    improving both the gain and the bandwidth of a microstrip patch antenna . (2) Description of the Prior Art [0004] A patch antenna , also referred to as a...rectangular microstrip antenna , is a type of radio antenna with a low profile that can be mounted on a flat surface. The patch antenna includes a...patch antenna form a Attorney Docket No. 101925 2 of 11 resonant piece of microstrip transmission line. The patch is designed to have a length of

  5. A model for assessing habitat fragmentation caused by new infrastructures in extensive territories - evaluation of the impact of the Spanish strategic infrastructure and transport plan.

    PubMed

    Mancebo Quintana, S; Martín Ramos, B; Casermeiro Martínez, M A; Otero Pastor, I

    2010-05-01

    The aim of the present work is to design a model for evaluating the impact of planned infrastructures on species survival at the territorial scale by calculating a connectivity index. The method developed involves determining the effective distance of displacement between patches of the same habitat, simplifying earlier models so that there is no dependence on specific variables for each species. A case study is presented in which the model was used to assess the impact of the forthcoming roads and railways included in the Spanish Strategic Infrastructure and Transport Plan (PEIT, in its Spanish initials). This study took into account the habitats of peninsular Spain, which occupies an area of some 500,000 km(2). In this territory, the areas deemed to provide natural habitats are defined by Directive 92/43/EEC. The impact of new infrastructures on connectivity was assessed by comparing two scenarios, with and without the plan, for the major new road and railway networks. The calculation of the connectivity index (CI) requires the use of a raster methodology based on the Arc/Info geographical information system (GIS). The actual calculation was performed using a program written in Arc/Info Macro Language (AML); this program is available in FragtULs (Mancebo Quintana, 2007), a set of tools for calculating indicators of fragmentation caused by transport infrastructure (http://topografia.montes.upm.es/fragtuls.html). The indicator of connectivity proposed allows the estimation of the connectivity between all the patches of a territory, with no artificial (non-ecologically based) boundaries imposed. The model proposed appears to be a useful tool for the analysis of fragmentation caused by plans for large territories. Copyright 2009 Elsevier Ltd. All rights reserved.

  6. An Optical Flow-Based Full Reference Video Quality Assessment Algorithm.

    PubMed

    K, Manasa; Channappayya, Sumohana S

    2016-06-01

    We present a simple yet effective optical flow-based full-reference video quality assessment (FR-VQA) algorithm for assessing the perceptual quality of natural videos. Our algorithm is based on the premise that local optical flow statistics are affected by distortions and the deviation from pristine flow statistics is proportional to the amount of distortion. We characterize the local flow statistics using the mean, the standard deviation, the coefficient of variation (CV), and the minimum eigenvalue ( λ min ) of the local flow patches. Temporal distortion is estimated as the change in the CV of the distorted flow with respect to the reference flow, and the correlation between λ min of the reference and of the distorted patches. We rely on the robust multi-scale structural similarity index for spatial quality estimation. The computed temporal and spatial distortions, thus, are then pooled using a perceptually motivated heuristic to generate a spatio-temporal quality score. The proposed method is shown to be competitive with the state-of-the-art when evaluated on the LIVE SD database, the EPFL Polimi SD database, and the LIVE Mobile HD database. The distortions considered in these databases include those due to compression, packet-loss, wireless channel errors, and rate-adaptation. Our algorithm is flexible enough to allow for any robust FR spatial distortion metric for spatial distortion estimation. In addition, the proposed method is not only parameter-free but also independent of the choice of the optical flow algorithm. Finally, we show that the replacement of the optical flow vectors in our proposed method with the much coarser block motion vectors also results in an acceptable FR-VQA algorithm. Our algorithm is called the flow similarity index.

  7. Development of relative thermal stress index (RTSI) for Monitoring and Management of Dry Deciduous Ecosystem

    NASA Astrophysics Data System (ADS)

    Gupta, R. K.; Vijayan, D.

    Gir wildlife sanctuary located between 20 r 57 to 21 r 20 N and 70 r 28 to 71 r 13 E is the last home of Asiatic lions Its biodiversity comprises of 450 recorded flowering plant species 32 species of mammals 26 species of reptiles about 300 species of birds and more than 2000 species of insects As per 1995 census it has 304 lions and 268 leopards The movement of wildlife to thermally comfortable zones to reduce stress conditions forces the changes in management plan with reference to change in localized water demand This necessitates the use of space based thermal data available from AVHRR MODIS etc to monitor temperature of Gir-ecosystem for meso-scale level operational utility As the time scale of the variability of NDVI parameter is much higher than that for lower boundary temperature LBT the dense patch in riverine forest having highest NDVI value would not experience change in its vigour with the change in the season NDVI value of such patch would be near invariant over the year and temperature of this pixel could serve as reference temperature for developing the concept of relative thermal stress index RTSI which is defined as RTSI T p -T r T max -T r wherein T r T max and T p refer to LBT over the maximum NDVI reference point maximum LBT observed in the Gir ecosystem and the temperature of the pixel in the image respectively RTSI images were computed from AVHRR images for post-monsoon leaf-shedded and summer seasons Scatter plot between RTSI and NDVI for summer seasons

  8. The development of an assessment tool for the mobility of lightweight autonomous vehicles on coastal terrain

    NASA Astrophysics Data System (ADS)

    Worley, Marilyn E.; Ren, Ping; Sandu, Corina; Hong, Dennis

    2007-04-01

    This study focuses on developing an assessment tool for the performance prediction of lightweight autonomous vehicles with varying locomotion platforms on coastal terrain involves three segments. A table based on the House of Quality shows the relationships - high, low, or adverse - between mission profile requirements and general performance measures and geometries of vehicles under consideration for use. This table, when combined with known values for vehicle metrics, provides information for an index formula used to quantitatively compare the mobility of a user-chosen set of vehicles, regardless of their methods of locomotion. To study novel forms of locomotion, and to compare their mobility and performance with more traditional wheeled and tracked vehicles, several new autonomous vehicles - bipedal, self-excited dynamic tripedal, active spoke-wheel - are currently under development. While the terramechanics properties of wheeled and tracked vehicles, such as the contact patch pressure distribution, have been understood and models have been developed for heavy vehicles, the feasibility of extrapolating them to the analysis of light vehicles is still under analysis. wheeled all-terrain vehicle and a lightweight autonomous tracked vehicle have been tested for effects of sand gradation, vehicle speed, and vehicle payload on measures of pressure and sinkage in the contact patch, and preliminary analysis is presented on the sinkage of the wheeled all-terrain vehicle. These three segments - development of the comparison matrix and indexing function, modeling and development of novel forms of locomotion, and physical experimentation of lightweight tracked and wheeled vehicles on varying terrain types for terramechanic model validation - combine to give an overall picture of mobility that spans across different forms of locomotion.

  9. The effect of travel loss on evolutionarily stable distributions of populations in space

    USGS Publications Warehouse

    DeAngelis, D.L.; Wolkowicz, G.S.K.; Lou, Y.; Jiang, Y.; Novak, M.; Svanback, R.; Araujo, M.S.; Jo, Y.S.; Cleary, E.A.

    2011-01-01

    A key assumption of the ideal free distribution (IFD) is that there are no costs in moving between habitat patches. However, because many populations exhibit more or less continuous population movement between patches and traveling cost is a frequent factor, it is important to determine the effects of costs on expected population movement patterns and spatial distributions. We consider a food chain (tritrophic or bitrophic) in which one species moves between patches, with energy cost or mortality risk in movement. In the two-patch case, assuming forced movement in one direction, an evolutionarily stable strategy requires bidirectional movement, even if costs during movement are high. In the N-patch case, assuming that at least one patch is linked bidirectionally to all other patches, optimal movement rates can lead to source-sink dynamics where patches with negative growth rates are maintained by other patches with positive growth rates. As well, dispersal between patches is not balanced (even in the two-patch case), leading to a deviation from the IFD. Our results indicate that cost-associated forced movement can have important consequences for spatial metapopulation dynamics. Relevance to marine reserve design and the study of stream communities subject to drift is discussed. ?? 2011 by The University of Chicago.

  10. Response to rivastigmine transdermal patch or memantine plus rivastigmine patch is affected by apolipoprotein E genotype in Alzheimer patients.

    PubMed

    Han, Hyun Jeong; Kim, Byeong C; Lee, Jun-Young; Ryu, Seung-Ho; Na, Hae Ri; Yoon, Soo Jin; Park, Hyun Young; Shin, Joon Hyun; Cho, Soo-Jin; Yi, Hyon-Ah; Choi, Mun Seong; Heo, Jae-Hyeok; Park, Kyung Won; Kim, Kwang K; Choi, Seong Hye

    2012-01-01

    The apolipoprotein E (APOE) genotype in response to pharmacological treatments in patients with Alzheimer's disease (AD) remains a matter of controversy. This analysis investigated the effect of the APOE genotype on the clinical response to rivastigmine transdermal patch monotherapy or memantine plus rivastigmine patch in patients with mild to moderate AD. Two hundred and six (n = 206) patients with probable AD and Mini-Mental State Examination (MMSE) scores of 10-20 were randomized to rivastigmine patch monotherapy or memantine plus rivastigmine patch for 24 weeks. Of the 206 patients with probable AD, 146 patients who consented to genetic testing for APOE were included and assessed for this subgroup study. There were no significant differences on MMSE, NPI, ADAS-cog, ADCS-ADL, CDR-SB, NPI and FAB between rivastigmine patch monotherapy and memantine plus rivastigmine patch according to the APOE genotype. However, patients with moderately severe AD (MMSE ≤15) who were APOE ε4 carriers showed higher responder rates on ADCS-ADL with memantine plus rivastigmine patch compared to rivastigmine patch monotherapy. Moderately severe AD patients with the APOE ε4 allele may respond more favorably to memantine plus rivastigmine patch than ε4 noncarriers. Copyright © 2012 S. Karger AG, Basel.

  11. Landscape matrix mediates occupancy dynamics of Neotropical avian insectivores

    USGS Publications Warehouse

    Kennedy, Christina M.; Campbell Grant, Evan H.; Neel, Maile C.; Fagan, William F.; Marpa, Peter P.

    2011-01-01

    In addition to patch-level attributes (i.e., area and isolation), the nature of land cover between habitat patches (the matrix) may drive colonization and extinction dynamics in fragmented landscapes. Despite a long-standing recognition of matrix effects in fragmented systems, an understanding of the relative impacts of different types of land cover on patterns and dynamics of species occurrence remains limited. We employed multi-season occupancy models to determine the relative influence of patch area, patch isolation, within-patch vegetation structure, and landscape matrix on occupancy dynamics of nine Neotropical nsectivorous birds in 99 forest patches embedded in four matrix types (agriculture, suburban evelopment, bauxite mining, and forest) in central Jamaica. We found that within-patch vegetation structure and the matrix type between patches were more important than patch area and patch isolation in determining local colonization and local extinction probabilities, and that the effects of patch area, isolation, and vegetation structure on occupancy dynamics tended to be matrix and species dependent. Across the avian community, the landscape matrix influenced local extinction more than local colonization, indicating that extinction processes, rather than movement, likely drive interspecific differences in occupancy dynamics. These findings lend crucial empirical support to the hypothesis that species occupancy dynamics in fragmented systems may depend greatly upon the landscape context.

  12. Comparing reliabilities of strip and conventional patch testing.

    PubMed

    Dickel, Heinrich; Geier, Johannes; Kreft, Burkhard; Pfützner, Wolfgang; Kuss, Oliver

    2017-06-01

    The standardized protocol for performing the strip patch test has proven to be valid, but evidence on its reliability is still missing. To estimate the parallel-test reliability of the strip patch test as compared with the conventional patch test. In this multicentre, prospective, randomized, investigator-blinded reliability study, 132 subjects were enrolled. Simultaneous duplicate strip and conventional patch tests were performed with the Finn Chambers ® on Scanpor ® tape test system and the patch test preparations nickel sulfate 5% pet., potassium dichromate 0.5% pet., and lanolin alcohol 30% pet. Reliability was estimated by the use of Cohen's kappa coefficient. Parallel-test reliability values of the three standard patch test preparations turned out to be acceptable, with slight advantages for the strip patch test. The differences in reliability were 9% (95%CI: -8% to 26%) for nickel sulfate and 23% (95%CI: -16% to 63%) for potassium dichromate, both favouring the strip patch test. The standardized strip patch test method for the detection of allergic contact sensitization in patients with suspected allergic contact dermatitis is reliable. Its application in routine clinical practice can be recommended, especially if the conventional patch test result is presumably false negative. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  13. Immunohistochemical and prognostic analysis of apoptosis and proliferation in uveal melanoma.

    PubMed Central

    Mooy, C. M.; Luyten, G. P.; de Jong, P. T.; Luider, T. M.; Stijnen, T.; van de Ham, F.; van Vroonhoven, C. C.; Bosman, F. T.

    1995-01-01

    Neoplasia can be defined as deregulated tissue homeostasis caused by an imbalance between proliferation and apoptosis. Many genes are involved in the maintenance of tissue homeostasis, eg, the c-myc oncoprotein, which is an important regulator of cell proliferation and Bcl-2 protein, which is involved in the regulation of apoptosis. We studied retrospectively indices of proliferation, such as mitotic count and the Mib-1 index, on 51 uveal melanomas and compared their prognostic significance with established indicators of prognosis such as cell type and tumor size. Along the same line we investigated the expression of the regulating proteins c-myc and Bcl-2. Of all parameters tested, the largest tumor diameter and mitotic count were most strongly associated with tumor-related death (P < 0.001 and P = 0.005, respectively). In addition, cell type, the presence of epithelioid cells, the Mib-1 index, and the percentage of cytoplasmic c-myc-positive cells were significant predictive factors. Multivariate analysis showed that the Mib-1 index, largest tumor diameter, and the percentage of cytoplasmic c-myc-positive cells were independent prognostic parameters. Bcl-2 expression did not correlate with clinical outcome. The Mib-1 index correlated with the presence of epithelioid cells (P < 0.03) and the presence of apoptotic bodies (P < 0.001) and c-myc. A strong inverse relationship was found between (nuclear and cytoplasmic) c-myc and Bcl-2 (P < 0.00004 and P < 0.006, respectively), suggesting that Bcl-2 cooperates with c-myc to immortalize uveal melanoma cells. Images Figure 1 Figure 2 PMID:7573354

  14. A comparison of bleeding patterns and cycle control using two transdermal contraceptive systems: a multicenter, open-label, randomized study.

    PubMed

    Gruber, D; Skřivánek, A; Serrani, M; Lanius, V; Merz, M

    2015-02-01

    To investigate the bleeding pattern and cycle control parameters of a contraceptive patch containing 0.55 mg ethinyl estradiol (EE) and 2.1 mg gestodene (GSD) compared with a patch containing 0.6 mg EE and 6 mg norelgestromin (NGMN). In this phase III, open-label, randomized, parallel-group trial, healthy women aged 18-35 years (smokers aged 18-30 years) received either the EE/GSD patch (n=200) or the EE/NGMN patch (n=198). Treatment consisted of one patch per week for 3 weeks followed by a 7-day, patch-free interval for seven cycles. Bleeding control was assessed in two 90-day reference periods. In reference period 1, mean number of bleeding/spotting days was comparable across treatment groups (p>0.05). However, in reference period 2, there were fewer bleeding/spotting days in the EE/GSD patch group (15.7 versus 18.4; p<0.0001). Mean number of bleeding/spotting episodes was comparable across groups for both reference periods, but bleeding/spotting episodes were shorter for the EE/GSD patch than the EE/NGMN patch during reference period 1 (5.13 days versus 5.53 days, respectively; p<0.05) and reference period 2 (5.07 versus 5.66; p=0.0001). Both treatment groups showed a similar frequency of withdrawal bleeding episodes; however, across all seven cycles, the length of these episodes was consistently shorter with the EE/GSD patch (p<0.01). There were no notable treatment differences in intracyclic bleeding. Bleeding pattern and cycle control achieved with the EE/GSD patch was similar to that of the EE/NGMN patch. The paper presents data on the bleeding pattern and cycle control parameters of an investigational transdermal contraceptive patch containing EE and GSD compared with an approved contraceptive patch containing EE and NGMN. This descriptive study found that bleeding patterns associated with the EE/GSD patch were similar to those of an EE/NGMN patch providing higher EE exposure. Copyright © 2015 Elsevier Inc. All rights reserved.

  15. Transdermal patches: history, development and pharmacology

    PubMed Central

    Pastore, Michael N; Kalia, Yogeshvar N; Horstmann, Michael; Roberts, Michael S

    2015-01-01

    Transdermal patches are now widely used as cosmetic, topical and transdermal delivery systems. These patches represent a key outcome from the growth in skin science, technology and expertise developed through trial and error, clinical observation and evidence-based studies that date back to the first existing human records. This review begins with the earliest topical therapies and traces topical delivery to the present-day transdermal patches, describing along the way the initial trials, devices and drug delivery systems that underpin current transdermal patches and their actives. This is followed by consideration of the evolution in the various patch designs and their limitations as well as requirements for actives to be used for transdermal delivery. The properties of and issues associated with the use of currently marketed products, such as variability, safety and regulatory aspects, are then described. The review concludes by examining future prospects for transdermal patches and drug delivery systems, such as the combination of active delivery systems with patches, minimally invasive microneedle patches and cutaneous solutions, including metered-dose systems. PMID:25560046

  16. Damage sensitivity investigations of EMI technique on different materials through coupled field analysis

    NASA Astrophysics Data System (ADS)

    Joshi, Bhrigu; Adhikari, Sailesh; Bhalla, Suresh

    2016-04-01

    This paper presents a comparative study through the piezoelectric coupled field analysis mode of finite element method (FEM) on detection of damages of varying magnitude, encompassing three different types of structural materials, using piezo impedance transducers. An aluminum block, a concrete block and a steel block of dimensions 48×48×10 mm were modelled in finite element software ANSYS. A PZT patch of 10×10×0.3 mm was also included in the model as surface bonded on the block. Coupled field analysis (CFA) was performed to obtain the admittance signatures of the piezo sensor in the frequency range of 0-250 kHz. The root mean square deviation (RMSD) index was employed to quantify the degree of variation of the signatures. It was found that concrete exhibited deviation in the signatures only with the change of damping values. However, the other two materials showed variation in the signatures even with changes in density and elasticity values in a small portion of the specimen. The comparative study shows that the PZT patches are more sensitive to damage detection in materials with low damping and the sensitivity typically decreases with increase in the damping.

  17. Pharmacokinetics, safety and tolerability of rotigotine transdermal patch in healthy Japanese and Caucasian subjects.

    PubMed

    Cawello, Willi; Kim, Seong R; Braun, Marina; Elshoff, Jan-Peer; Ikeda, Junji; Funaki, Tomoo

    2014-02-01

    Rotigotine is a dopamine receptor agonist with activity across the D1 through to D5 receptors as well as select serotonergic and adrenergic sites; continuous transdermal delivery of rotigotine with replacement of the patch once daily maintains stable plasma concentrations over 24 h. Rotigotine is indicated for the treatment of early and advanced-stage Parkinson's disease and moderate-to-severe idiopathic restless legs syndrome. The pharmacokinetics and pharmacodynamics of a drug may vary between subjects of different ethnic origin. This study evaluated the pharmacokinetics, safety, and tolerability of single-dose treatment with rotigotine transdermal patch in Japanese and Caucasian subjects. In this open-label, parallel-group study, healthy male and female subjects of Japanese or Caucasian ethnic origin were matched by sex, body mass index, and age. A single transdermal patch delivering 2 mg/24 h rotigotine (patch content 4.5 mg) was applied to the ventral/lateral abdomen for 24 h. The main outcome measures were the plasma concentrations of unconjugated and total rotigotine and its desalkyl metabolites and derived pharmacokinetic parameters (area under the concentration-time curve from time zero to last quantifiable concentration [AUClast], maximum plasma concentration [Cmax], and body weight- and dose-normalized values). The pharmacokinetic analysis included 48 subjects (24 Japanese, 24 Caucasian). The mean apparent dose of rotigotine was 2.0±0.5 mg for Japanese subjects and 2.08±0.58 mg for Caucasians. Plasma concentration-time profiles of unconjugated rotigotine and of the main metabolites were similar for both ethnic groups. Parameters of model-independent pharmacokinetics, Cmax, time to Cmax (tmax), and AUClast, for unconjugated rotigotine showed no statistically significant differences between Japanese and Caucasian subjects. Values of concentration-dependent pharmacokinetic parameters were higher in female subjects; this difference was minimized after correction for body weight. A statistically significant difference between ethnic groups was observed for total rotigotine concentrations (total rotigotine=unconjugated rotigotine+conjugated rotigotine), with slightly lower values in Caucasians after correction for body weight and apparent dose. No relevant differences were observed between males and females. Inter-individual variability was high. The terminal half-life for unconjugated rotigotine was 5.3 h in Japanese subjects and 5.7 h in Caucasians; corresponding values for total rotigotine were 8.6 h and 9.6 h. Less than 0.1% of the apparent dose was renally excreted as the parent compound. Renal elimination of total rotigotine covers 11.7% of absorbed dose in Japanese subjects and 10.8% of the absorbed dose in Caucasians, whereas the renal elimination via total despropyl rotigotine was 8.2 and 7.1%, respectively. The corresponding values for total desthienylethyl rotigotine were 3.5% in Japanese subjects and 4.2% Caucasians. Most adverse events were mild in intensity and typical for dopamine agonists or for transdermal therapeutics. Administration of a single patch delivering 2 mg/24 h rotigotine resulted in comparable pharmacokinetic profiles in Japanese and Caucasian subjects. The rotigotine transdermal patch was generally well-tolerated. Our findings suggest similar dose requirements for Japanese and Caucasian populations.

  18. Effects of Sediment Patches on Sediment Transport Predictions in Steep Mountain Channels

    NASA Astrophysics Data System (ADS)

    Monsalve Sepulveda, A.; Yager, E.

    2013-12-01

    Bed surface patches occur in most gravel-bedded rivers and in steep streams can be divided between relatively immobile boulders and more mobile patches of cobbles and gravel. This spatial variability in grain size, roughness and sorting impact bed load transport by altering the relative local mobility of different grain sizes and creating complex local flow fields. Large boulders also bear a significant part of the total shear stress and we hypothesize that the remaining shear stress on a given mobile patch is a distribution of values that depend on the local topography, patch type and location relative to the large roughness elements and thalweg. Current sediment transport equations do not account for the variation in roughness, local flow and grain size distributions on and between patches and often use an area-weighted approach to obtain a representative grain size distribution and reach-averaged shear stress. Such equations also do not distinguish between active (patches where at least one grain size is in motion) and inactive patches or include the difference in mobility between patch classes as result of spatial shear stress distributions. To understand the effects of sediment patches on sediment transport in steep channels, we calculated the shear stress distributions over a range of patch classes in a 10% gradient step-pool stream. We surveyed the bed with a high density resolution (every 5 cm in horizontal and vertical directions over a 40 m long reach) using a total station and terrestrial LiDAR, mapped and classified patches by their grain size distributions, and measured water surface elevations and mean velocities for low to moderate flow events. Using these data we calibrated a quasi-three dimensional model (FaSTMECH) to obtain shear stress distributions over each patch for a range of flow discharges. We modified Parker's (1990) equations to use the calculated shear stress distribution, measured grain sizes, and a specific hiding function for each patch class, and then added the bedload fluxes for each patch to calculate the reach-averaged sediment transport rate. Sediment mobility in patches was highly dependent on the patch's class and location relative to the thalweg and large roughness elements. Compared to deterministic formulations, the use of distributions of shear stress improved predictions of bedload transport in steep mountain channels.

  19. Crystal structure of spinach plastocyanin at 1.7 A resolution.

    PubMed Central

    Xue, Y.; Okvist, M.; Hansson, O.; Young, S.

    1998-01-01

    The crystal structure of plastocyanin from spinach has been determined using molecular replacement, with the structure of plastocyanin from poplar as a search model. Successful crystallization was facilitated by site-directed mutagenesis in which residue Gly8 was substituted with Asp. The region around residue 8 was believed to be too mobile for the wild-type protein to form crystals despite extensive screening. The current structure represents the oxidized plastocyanin, copper (II), at low pH (approximately 4.4). In contrast to the similarity in the core region as compared to its poplar counterpart, the structure shows some significant differences in loop regions. The most notable is the large shift of the 59-61 loop where the largest shift is 3.0 A for the C(alpha) atom of Glu59. This results in different patterns of electrostatic potential around the acidic patches for the two proteins. PMID:9792096

  20. High Energy Astronomy Observatory (HEAO)

    NASA Image and Video Library

    1980-01-01

    This supernova in the constellation Cassiopeia was observed by Tycho Brahe in 1572. In this x-ray image from the High Energy Astronomy Observatory (HEAO-2/Einstein Observatory produced by nearly a day of exposure time, the center region appears filled with emissions that can be resolved into patches or knots of material. However, no central pulsar or other collapsed object can be seen. The HEAO-2, the first imaging and largest x-ray telescope built to date, was capable of producing actual photographs of x-ray objects. Shortly after launch, the HEAO-2 was nicknamed the Einstein Observatory by its scientific experimenters in honor of the centernial of the birth of Albert Einstein, whose concepts of relativity and gravitation have influenced much of modern astrophysics, particularly x-ray astronomy. The HEAO-2, designed and developed by TRW, Inc. under the project management of the Marshall Space Flight Center, was launched aboard an Atlas/Centaur launch vehicle on November 13, 1978.

  1. Spatio-temporal evolution of the 2011 Prague, Oklahoma aftershock sequence revealed using subspace detection and relocation

    USGS Publications Warehouse

    McMahon, Nicole D; Aster, Richard C.; Yeck, William; McNamara, Daniel E.; Benz, Harley M.

    2017-01-01

    The 6 November 2011 Mw 5.7 earthquake near Prague, Oklahoma is the second largest earthquake ever recorded in the state. A Mw 4.8 foreshock and the Mw 5.7 mainshock triggered a prolific aftershock sequence. Utilizing a subspace detection method, we increase by fivefold the number of precisely located events between 4 November and 5 December 2011. We find that while most aftershock energy is released in the crystalline basement, a significant number of the events occur in the overlying Arbuckle Group, indicating that active Meeker-Prague faulting extends into the sedimentary zone of wastewater disposal. Although the number of aftershocks in the Arbuckle Group is large, comprising ~40% of the aftershock catalog, the moment contribution of Arbuckle Group earthquakes is much less than 1% of the total aftershock moment budget. Aftershock locations are sparse in patches that experienced large slip during the mainshock.

  2. Description of Lutzomyia (Helcocyrtomyia) tolimensis, a new species of phlebotomine sandfly (Diptera: Psychodidae) from Colombia

    PubMed Central

    Carrasquilla, María C; Munstermann, Leonard; Marín, Dairo; Ocampo, Clara; Ferro, Cristina

    2016-01-01

    A description is presented of Lutzomyia tolimensis sp. nov., a new species of the subgenus Helcocyrtomyia, series sanguinaria. It was collected in dwellings, peridomestic environment and in nearby forest patches located in the foothills of the Andean Central Cordillera, where in 2004–2006 occurred the largest epidemic ever recorded of leishmaniasis in Colombia. The male of this species is differentiated from other members of the series sanguinaria based on the following combination of characters: (i) base of coxite with 0–3 subequal setae, (ii) spines of gonostyle organized in positions 2.1.2, (iii) spines inserted on distal half of gonostyle and (iv) relationship of alar indices. The female is recognized principally by the following characters: (i) palpomere V longer than III, (ii) length of labro-epipharynx and (iii) relationship of the alar indices. PMID:23295748

  3. Tree diversity of the Dja Faunal Reserve, southeastern Cameroon

    PubMed Central

    2014-01-01

    Abstract The Dja Faunal Reserve located in southeastern Cameroon represents the largest and best protected rainforest patch in Cameroon. Here we make available a dataset on the inventory of tree species collected across the Dja. For this study nine 5 km long and 5 m wide transects were installed. All species with a diameter at breast height greater than 10 cm were recorded, identified and measured. A total of 11546 individuals were recorded, corresponding to a total of 312 species identified with 60 genera containing unidentified taxa. Of the 54 identified families Fabaceae, Rubiaceae and Malvaceae were the most species rich, whereas Fabaceae, Phyllantaceae and Olacaceae were the most abundant. Finally, Tabernaemontana crassa was the most abundant species across the Reserve. This dataset provides a unique insight into the tree diversity of the Dja Faunal Reserve and is now publically available and usable. PMID:24855441

  4. Intestinal M cells

    PubMed Central

    Ohno, Hiroshi

    2016-01-01

    We have an enormous number of commensal bacteria in our intestine, moreover, the foods that we ingest and the water we drink is sometimes contaminated with pathogenic microorganisms. The intestinal epithelium is always exposed to such microbes, friend or foe, so to contain them our gut is equipped with specialized gut-associated lymphoid tissue (GALT), literally the largest peripheral lymphoid tissue in the body. GALT is the intestinal immune inductive site composed of lymphoid follicles such as Peyer’s patches. M cells are a subset of intestinal epithelial cells (IECs) residing in the region of the epithelium covering GALT lymphoid follicles. Although the vast majority of IEC function to absorb nutrients from the intestine, M cells are highly specialized to take up intestinal microbial antigens and deliver them to GALT for efficient mucosal as well as systemic immune responses. I will discuss recent advances in our understanding of the molecular mechanisms of M-cell differentiation and functions. PMID:26634447

  5. The Educational Index: Linking Academic Instruction to Capital Planning

    ERIC Educational Resources Information Center

    Anding, Craig W.; Richards, David; Zoller, Susan C.

    2012-01-01

    The Bailey Yard is the largest rail classification yard in the world, stretching eight miles across the western prairie at North Platte, Nebraska. Trains leave Bailey Yard everyday--coal trains, grain trains, manifest trains--and each one represents a train prototype. Minneapolis Public School buildings are like a manifest train, where the…

  6. Index of Hispanic Economic Indicators.

    ERIC Educational Resources Information Center

    National Council of La Raza, Washington, DC.

    One in 10 Americans is of Hispanic origin, and Census projections show that in about 10 years, Hispanics will constitute the largest minority group in the United States and, by 2035, 1 in 5 Americans will be Hispanic. This survey of leading and lagging indicators of economic well-being shows that on several measures, Hispanics have demonstrated…

  7. The Higgs Particle: A Useful Analogy for Physics Classrooms

    ERIC Educational Resources Information Center

    Cid, Xabier; Cid, Ramon

    2010-01-01

    In November 2009, the largest experiment in history was restarted. Its prime target is the Higgs particle--the last remaining undiscovered piece of our current theory of matter. We present a very simple way to introduce this topic to senior secondary school students, using a comparison with the refractive index of light.

  8. Facilitating Women's Occupational Integration. Background Paper No. 26.

    ERIC Educational Resources Information Center

    Figart, Deborah M.; Bergmann, Barbara R.

    Occupational sex segregation is one of the most obvious facts of economic life. The largest declines in the sex segregation index between 1970 and 1980 were in the managerial and professional specialty and in the service occupations. Changes were greater for white-collar than blue-collar occupations for both white and minority women. White women…

  9. Patch size has no effect on insect visitation rate per unit area in garden-scale flower patches

    NASA Astrophysics Data System (ADS)

    Garbuzov, Mihail; Madsen, Andy; Ratnieks, Francis L. W.

    2015-01-01

    Previous studies investigating the effect of flower patch size on insect flower visitation rate have compared relatively large patches (10-1000s m2) and have generally found a negative relationship per unit area or per flower. Here, we investigate the effects of patch size on insect visitation in patches of smaller area (range c. 0.1-3.1 m2), which are of particular relevance to ornamental flower beds in parks and gardens. We studied two common garden plant species in full bloom with 6 patch sizes each: borage (Borago officinalis) and lavender (Lavandula × intermedia 'Grosso'). We quantified flower visitation by insects by making repeated counts of the insects foraging at each patch. On borage, all insects were honey bees (Apis mellifera, n = 5506 counts). On lavender, insects (n = 737 counts) were bumble bees (Bombus spp., 76.9%), flies (Diptera, 22.4%), and butterflies (Lepidoptera, 0.7%). On both plant species we found positive linear effects of patch size on insect numbers. However, there was no effect of patch size on the number of insects per unit area or per flower and, on lavender, for all insects combined or only bumble bees. The results show that it is possible to make unbiased comparisons of the attractiveness of plant species or varieties to flower-visiting insects using patches of different size within the small scale range studied and make possible projects aimed at comparing ornamental plant varieties using existing garden flower patches of variable area.

  10. Patching. Restitching business portfolios in dynamic markets.

    PubMed

    Eisenhardt, K M; Brown, S L

    1999-01-01

    In turbulent markets, businesses and opportunities are constantly falling out of alignment. New technologies and emerging markets create fresh opportunities. Converging markets produce more. And of course, some markets fade. In this landscape of continuous flux, it's more important to build corporate-level strategic processes that enable dynamic repositioning than it is to build any particular defensible position. That's why smart corporate strategists use patching, a process of mapping and remapping business units to create a shifting mix of highly focused, tightly aligned businesses that can respond to changing market opportunities. Patching is not just another name for reorganizing; patchers have a distinctive mindset. Traditional managers see structure as stable; patching managers believe structure is inherently temporary. Traditional managers set corporate strategy first, but patching managers keep the organization focused on the right set of business opportunities and let strategy emerge from individual businesses. Although the focus of patching is flexibility, the process itself follows a pattern. Patching changes are usually small in scale and made frequently. Patching should be done quickly; the emphasis is on getting the patch about right and fixing problems later. Patches should have a test drive before they're formalized but then be tightly scripted after they've been announced. And patching won't work without the right infrastructure: modular business units, fine-grained and complete unit-level metrics, and companywide compensation parity. The authors illustrate how patching works and point out some common stumbling blocks.

  11. Variability of Slip Behavior in Simulations of Dynamic Rupture Interaction With Stronger Fault Patches Over Long-Term Deformation Histories

    NASA Astrophysics Data System (ADS)

    Lapusta, N.; Liu, Y.

    2007-12-01

    Heterogeneity in fault properties can have significant effect on dynamic rupture propagation and aseismic slip. It is often assumed that a fixed heterogeneity would have similar effect on fault slip throughout the slip history. We investigate dynamic rupture interaction with a fault patch of higher normal stress over several earthquake cycles in a three-dimensional model. We find that the influence of the heterogeneity on dynamic events has significant variation and depends on prior slip history. We consider a planar strike-slip fault governed by rate and state friction and driven by slow tectonic loading on deeper extension of the fault. The 30 km by 12 km velocity-weakening region, which is potentially seismogenic, is surrounded by steady-state velocity-strengthening region. The normal stress is constant over the fault, except in a circular patch of 2 km in diameter located in the seismogenic region, where normal stress is higher than on the rest of the fault. Our simulations employ the methodology developed by Lapusta and Liu (AGU, 2006), which is able to resolve both dynamic and quasi-static stages of spontaneous slip accumulation in a single computational procedure. The initial shear stress is constant on the fault, except in a small area where it is higher and where the first large dynamic event initiates. For patches with 20%, 40%, 60% higher normal stress, the first event has significant dynamic interaction with the patch, creating a rupture speed decrease followed by a supershear burst and larger slip around the patch. Hence, in the first event, the patch acts as a seismic asperity. For the case of 100% higher stress, the rupture is not able to break the patch in the first event. In subsequent dynamic events, the behavior depends on the strength of heterogeneity. For the patch with 20% higher normal stress, dynamic rupture in subsequent events propagates through the patch without any noticeable perturbation in rupture speed or slip. In particular, supershear propagation and additional slip accumulation around the patch are never repeated in the simulated history of the fault, and the patch stops manifesting itself as a seismic asperity. This is due to higher shear stress that is established at the patch after the first earthquake cycle. For patches with higher normal stress, shear stress redistribution also occurs, but it is less effective. The patches with 40% and 60% higher normal stress continue to affect rupture speed and fault slip in some of subsequent events, although the effect is much diminished with respect to the first event. For example, there are no supershear bursts. The patch with 100% higher normal stress is first broken in the second large event, and it retains significant influence on rupture speed and slip throughout the fault history, occasionally resulting in supershear bursts. Additional slip complexity emerges for patches with 40% and higher normal stress contrast. Since higher normal stress corresponds to a smaller nucleation size, nucleation of some events moves from the rheological transitions (where nucleation occurs in the cases with no stronger patch and with the patch of 20% higher normal stress) to the patches of higher normal stress. The patches nucleate both large, model-spanning, events, and small events that arrest soon after exiting the patch. Hence not every event that originates at the location of a potential seismic asperity is destined to be large, as its subsequent propagation is significantly influenced by the state of stress outside the patch.

  12. Pharmacokinetic overview of ethinyl estradiol dose and bioavailability using two transdermal contraceptive systems and a standard combined oral contraceptive

    PubMed Central

    Hofmann, Birte; Reinecke, Isabel; Schuett, Barbara; Merz, Martin; Zurth, Christian

    2014-01-01

    Objective: To determine the relative bioavailability of ethinyl estradiol (EE) and gestodene (GSD) after application of a novel transdermal contraceptive patch vs. a standard combined oral contraceptive (COC) pill (study 1), and to evaluate the pharmacokinetics (PK) of EE after application of the EE/GSD patch compared with an EE/norelgestromin (NGMN) patch (study 2). Materials: Participants were healthy, non-obese women aged 18 – 45 years (study 1) or 18 – 35 years (study 2). Compositions of study treatments were as follows: 0.55 mg EE/2.1 mg GSD (EE/GSD patch); 0.02 mg EE/0.075 mg GSD (standard COC); 0.6 mg EE/6 mg NGMN (EE/NGMN patch). Methods: In study 1, which consisted of 3 treatment periods (each followed by 7 patch- or pill-free days), treatments were administered in one of two randomized orders: either P–M–E (EE/GSD patch (P) every 7 days for 28 days → COC (M) once-daily for 21 days → two 7-day patch-wearing periods followed by one 10-day patch-wearing phase (E)), or the same treatments administered in sequence M–P–E. For study 2, participants received either the EE/GSD patch or EE/NGMN patch for seven treatment cycles (one patch per week for 3 weeks followed by a 7-day patch-free interval). Results: In study 1, average daily exposure to EE was similar for treatments P and M; the mean daily area under the concentration-time curve (AUC) ratio of treatment P vs. treatment M for EE was 1.06 (90% confidence interval (CI): 0.964 – 1.16), indicating average daily delivery similar to oral administration of 0.019 – 0.023 mg EE. For unbound GSD, average daily exposure was lower for treatment P vs. treatment M. The mean AUC ratio of treatment P vs. treatment M for unbound GSD was 0.820 (90% CI: 0.760 – 0.885), indicating average daily delivery from the patch of 0.057 – 0.066 mg GSD. Prolonged patch wearing did not result in a distinct decline in GSD and EE serum concentrations. In study 2, AUC at steady state (AUC0–168,ss), average steady-state serum concentration, and maximum steady-state serum concentration for EE was 2.0 – 2.7-fold higher for the EE/NGMN patch vs. the EE/GSD patch. The EE/GSD patch was well tolerated in both studies. Conclusions: Based on the 90% CI of the AUC ratio of oral treatment vs. patch application for unbound GSD and EE, the daily doses of GSD and EE released from the EE/GSD patch over the 7-day application period provided the same systemic exposure as those recorded after daily oral administration of a COC containing 0.02 mg EE and 0.06 mg GSD. The EE/GSD patch showed reduced EE exposure compared with the EE/NGMN patch. Together with its good tolerability, these properties support the EE/GSD patch as an effective and well-tolerated alternative to available transdermal and oral contraceptives. PMID:25295716

  13. Reproducible, high performance patch antenna array apparatus and method of fabrication

    DOEpatents

    Strassner, II, Bernd H.

    2007-01-23

    A reproducible, high-performance patch antenna array apparatus includes a patch antenna array provided on a unitary dielectric substrate, and a feed network provided on the same unitary substrate and proximity coupled to the patch antenna array. The reproducibility is enhanced by using photolithographic patterning and etching to produce both the patch antenna array and the feed network.

  14. Methods of Making and Using Shape Memory Polymer Composite Patches

    NASA Technical Reports Server (NTRS)

    Hood, Patrick J.

    2011-01-01

    A method of repairing a composite component having a damaged area including: laying a composite patch over the damaged area: activating the shape memory polymer resin to easily and quickly mold said patch to said damaged area; deactivating said shape memory polymer so that said composite patch retains the molded shape; and bonding said composite patch to said damaged part.

  15. Conserving Tropical Tree Diversity and Forest Structure: The Value of Small Rainforest Patches in Moderately-Managed Landscapes

    PubMed Central

    Hernández-Ruedas, Manuel A.; Arroyo-Rodríguez, Víctor; Meave, Jorge A.; Martínez-Ramos, Miguel; Ibarra-Manríquez, Guillermo; Martínez, Esteban; Jamangapé, Gilberto; Melo, Felipe P. L.; Santos, Bráulio A.

    2014-01-01

    Rainforests are undergoing severe deforestation and fragmentation worldwide. A huge amount of small forest patches are being created, but their value in conserving biodiversity and forest structure is still controversial. Here, we demonstrate that in a species-rich and moderately-managed Mexican tropical landscape small rainforest patches (<100 ha) can be highly valuable for the conservation of tree diversity and forest structure. These patches showed diverse communities of native plants, including endangered species, and a new record for the country. Although the number of logged trees increased in smaller patches, patch size was a poor indicator of basal area, stem density, number of species, genera and families, and community evenness. Cumulative species-area curves indicated that all patches had a similar contribution to the regional species diversity. This idea also was supported by the fact that patches strongly differed in floristic composition (high β-diversity), independently of patch size. Thus, in agreement with the land-sharing approach, our findings support that small forest patches in moderately-managed landscapes should be included in conservation initiatives to maintain landscape heterogeneity, species diversity, and ecosystem services. PMID:24901954

  16. Slime moulds use heuristics based on within-patch experience to decide when to leave.

    PubMed

    Latty, Tanya; Beekman, Madeleine

    2015-04-15

    Animals foraging in patchy, non-renewing or slowly renewing environments must make decisions about how long to remain within a patch. Organisms can use heuristics ('rules of thumb') based on available information to decide when to leave the patch. Here, we investigated proximate patch-departure heuristics in two species of giant, brainless amoeba: the slime moulds Didymium bahiense and Physarum polycephalum. We explicitly tested the importance of information obtained through experience by eliminating chemosensory cues of patch quality. In P. polycephalum, patch departure was influenced by the consumption of high, and to a much lesser extent low, quality food items such that engulfing a food item increased patch-residency time. Physarum polycephalum also tended to forage for longer in darkened, 'safe' patches. In D. bahiense, engulfment of any food item increased patch residency irrespective of that food item's quality. Exposure to light had no effect on the patch-residency time of D. bahiense. Given that these organisms lack a brain, our results illustrate how the use of simple heuristics can give the impression that individuals make sophisticated foraging decisions. © 2015. Published by The Company of Biologists Ltd.

  17. Isolation and functional characteristics of adherent phagocytic cells from mouse Peyer's patches.

    PubMed Central

    MacDonald, T T; Carter, P B

    1982-01-01

    Attempts were made to isolate adherent phagocytic cells (macrophages) from mouse Peyer's patch cell suspensions. Cell suspensions prepared by teasing apart the Peyer's patches contained no adherent phagocytic cells. However, if Peyer's patch fragments were treated with collagenase to disrupt the tissue matrix, cells prepared in this way contained a subpopulation of adherent phagocytic cells. These cells comprised only 0.1-0.2% of the total nucleated cell population of the Peyer's patch. Similar cells could also be isolated from the Peyer's patches of germ-free mice, but as judged by their ability to ingest opsonized erythrocytes, these cells were less activated than cells from the Peyer's patches of normal mice. Adherent cells from the Peyer's patches of normal mice could present antigen (ovalbumin) to T cells, and Peyer's patches cell suspensions containing adherent cells could be stimulated in vitro to produce an anti-sheep red blood cell plaque-forming cell response in the absence of 2-mercaptoethanol. These studies show that although the frequency of phagocytic adherent cells is extremely low in Peyer's patches, these cells have functions consistent with that of adherent cells in other lymphoid tissues. PMID:7068173

  18. Conserving tropical tree diversity and forest structure: the value of small rainforest patches in moderately-managed landscapes.

    PubMed

    Hernández-Ruedas, Manuel A; Arroyo-Rodríguez, Víctor; Meave, Jorge A; Martínez-Ramos, Miguel; Ibarra-Manríquez, Guillermo; Martínez, Esteban; Jamangapé, Gilberto; Melo, Felipe P L; Santos, Bráulio A

    2014-01-01

    Rainforests are undergoing severe deforestation and fragmentation worldwide. A huge amount of small forest patches are being created, but their value in conserving biodiversity and forest structure is still controversial. Here, we demonstrate that in a species-rich and moderately-managed Mexican tropical landscape small rainforest patches (<100 ha) can be highly valuable for the conservation of tree diversity and forest structure. These patches showed diverse communities of native plants, including endangered species, and a new record for the country. Although the number of logged trees increased in smaller patches, patch size was a poor indicator of basal area, stem density, number of species, genera and families, and community evenness. Cumulative species-area curves indicated that all patches had a similar contribution to the regional species diversity. This idea also was supported by the fact that patches strongly differed in floristic composition (high β-diversity), independently of patch size. Thus, in agreement with the land-sharing approach, our findings support that small forest patches in moderately-managed landscapes should be included in conservation initiatives to maintain landscape heterogeneity, species diversity, and ecosystem services.

  19. A localized flare of dermatitis may render patch tests uninterpretable in some patients with recently controlled widespread dermatitis.

    PubMed

    Magembe, Anna J; Davis, Mark D P; Richardson, Donna M

    2009-01-01

    Patch testing rarely is confounded by localized dermatitis induced in the area being tested (usually the back). Its occurrence renders the interpretation of patch tests impossible. To review our experience of the circumstances in which this phenomenon occurs during patch testing. We retrospectively reviewed patients with this phenomenon who underwent patch testing from January 1, 2002, through June 30, 2006. Of the 3,569 patients tested, 12 (0.34% [9 men and 3 women]) had development of this phenomenon. All patients previously had recent widespread dermatitis that was suppressed temporarily with topical corticosteroids and wet dressings at the time of patch testing. The period between control of the dermatitis and the initiation of patch testing was less than 1 week for all patients. Three patients (25%) had recently discontinued therapy with systemic corticosteroids (less than 1 week earlier). In patients with irritable skin either immediately after widespread dermatitis is controlled or after the cessation of systemic corticosteroid treatment, a flare of dermatitis induced by patch testing may render patch tests unreadable and therefore uninterpretable. To avoid this confounding occurrence, a waiting period between control of widespread dermatitis and initiation of patch testing is advised.

  20. Ungulates rely less on visual cues, but more on adapting movement behaviour, when searching for forage.

    PubMed

    Venter, Jan A; Prins, Herbert H T; Mashanova, Alla; Slotow, Rob

    2017-01-01

    Finding suitable forage patches in a heterogeneous landscape, where patches change dynamically both spatially and temporally could be challenging to large herbivores, especially if they have no a priori knowledge of the location of the patches. We tested whether three large grazing herbivores with a variety of different traits improve their efficiency when foraging at a heterogeneous habitat patch scale by using visual cues to gain a priori knowledge about potential higher value foraging patches. For each species (zebra ( Equus burchelli ), red hartebeest ( Alcelaphus buselaphus subspecies camaa ) and eland ( Tragelaphus oryx )), we used step lengths and directionality of movement to infer whether they were using visual cues to find suitable forage patches at a habitat patch scale. Step lengths were significantly longer for all species when moving to non-visible patches than to visible patches, but all movements showed little directionality. Of the three species, zebra movements were the most directional. Red hartebeest had the shortest step lengths and zebra the longest. We conclude that these large grazing herbivores may not exclusively use visual cues when foraging at a habitat patch scale, but would rather adapt their movement behaviour, mainly step length, to the heterogeneity of the specific landscape.

  1. PATIENTS' KNOWLEDGE OF MEDICAL PATCHES IN HUNGARY.

    PubMed

    Somogyi, Orsolya; Zelko, Romana

    2016-11-01

    Transdermal therapy with medical patches is a simple possibility in home medication. As the correct use of patches has a decisive impact from the point of its modulator effect.A questionnaire survey was developed to explore level of patients' knowledge of the correct use of transdermal patches. A survey was administered in thirteen Hungarian community pharmacies from October of 2012 to May of 2015. Most of the participants, men and women over 18 years of age (n = 233), used major analgesic patches (fentanyl); the remainder were given nitroglycerin, NSAID analgesics patches during the survey. For the hypothesis testing it was assumed that men were more likely to use a razor for skin depilation before patch application than women as their denser pelage hinders patch adhesion. The hypothesis testing showed no significant gender difference in razor use (X² = 0.201; p = 0.654). Pharmacists should direct patients to avoid using soap for skin cleansing before patch application because only 22 percent of the participants always avoided its use. Since only 9 tests were flawless from 233 completed questionnaires. Many patients do not understand how to correctly apply a transdermal dosage patch. Pharmacists should teach their correct application based on results.

  2. A New Technique for System-to-system Transfer of Surface Data

    NASA Technical Reports Server (NTRS)

    Sterling, M. W.; Lucius, M. E.; Gordon, W. J.

    1985-01-01

    The purpose is to describe a recently developed technique aimed at providing a universal interface between surface types. In brief, a software package was developed which functions a common denominator of CAD/CAM surface types. This software enable one to convert from any given surface representation to any other target representation. The tiles maintain the same slope continuity as the target surface gram, bicubic patches are used since they allow one to match point, slope, and twist vectors to the target surface. Thus, slopes can be continuous or discontinuous as they are on the target surface. The patches can be of lower order if desired. For example, if only point information is available, the patches produced will be bilinear; however, the number of patches required is likely to increase correspondingly. The patches can be of higher order although many systems will not accept patches of more than order four. The final result of the program is a rectangular grid of bicubic patches. The patches fit the target surface exactly at their corners. Also, the patch corners have the same tangent and twist vectors. Adjacent patches will have slope continuity, unless a discontinuity was indicated by the target surface.

  3. Role of Bacterial Communities in the Natural Suppression of Rhizoctonia solani Bare Patch Disease of Wheat (Triticum aestivum L.)

    PubMed Central

    Yin, Chuntao; Hulbert, Scot H.; Schroeder, Kurtis L.; Mavrodi, Olga; Mavrodi, Dmitri; Dhingra, Amit; Schillinger, William F.

    2013-01-01

    Rhizoctonia bare patch and root rot disease of wheat, caused by Rhizoctonia solani AG-8, develops as distinct patches of stunted plants and limits the yield of direct-seeded (no-till) wheat in the Pacific Northwest of the United States. At the site of a long-term cropping systems study near Ritzville, WA, a decline in Rhizoctonia patch disease was observed over an 11-year period. Bacterial communities from bulk and rhizosphere soil of plants from inside the patches, outside the patches, and recovered patches were analyzed by using pyrosequencing with primers designed for 16S rRNA. Taxa in the class Acidobacteria and the genus Gemmatimonas were found at higher frequencies in the rhizosphere of healthy plants outside the patches than in that of diseased plants from inside the patches. Dyella and Acidobacteria subgroup Gp7 were found at higher frequencies in recovered patches. Chitinophaga, Pedobacter, Oxalobacteriaceae (Duganella and Massilia), and Chyseobacterium were found at higher frequencies in the rhizosphere of diseased plants from inside the patches. For selected taxa, trends were validated by quantitative PCR (qPCR), and observed shifts of frequencies in the rhizosphere over time were duplicated in cycling experiments in the greenhouse that involved successive plantings of wheat in Rhizoctonia-inoculated soil. Chryseobacterium soldanellicola was isolated from the rhizosphere inside the patches and exhibited significant antagonism against R. solani AG-8 in vitro and in greenhouse tests. In conclusion, we identified novel bacterial taxa that respond to conditions affecting bare patch disease symptoms and that may be involved in suppression of Rhizoctonia root rot and bare batch disease. PMID:24056471

  4. Habitat fragmentation influences nestling growth in Mediterranean blue and great tits

    NASA Astrophysics Data System (ADS)

    Bueno-Enciso, Javier; Ferrer, Esperanza S.; Barrientos, Rafael; Serrano-Davies, Eva; Sanz, Juan José

    2016-01-01

    In patchy forest areas, the size of the forest patch where birds breed has a strong influence on their breeding success. However, the proximate effects contributing to lowering the breeding success in small forest patches remain unclear; and a shortage of crucial resources in those forest patches has been suggested to account in some degree for this failure. With the aim to further investigate this issue, we have monitored the breeding cycle of blue and great tits in three 'large' forest patches (ranging between 26.5 and 29.6 ha) and twelve 'small' forest patches (ranging between 1.1 and 2.1 ha) in a Mediterranean area in central Spain, during three years (2011-2013). We also recorded the nestling diet inside the nest-boxes with the aid of handy-cams. Only males significantly differed between forest patch size categories; being on average younger and with better body condition in small patches for great and blue tits respectively. Reproductive traits did not vary between forest patch size categories, but the body condition of blue tit nestlings and the size of great tit nestlings did, being significantly better and larger respectively in large forest patches. The recruitment rate of blue tit nestlings was also higher in large patches. Regarding nestling diet, blue tits did not differ but great tits did, delivering a larger amount of caterpillars in large forest patches. Most variation in the reproductive traits occurred between years, probably due to annual differences in environmental conditions. This study suggests that food supply could be limiting the breeding success of birds above all in small patches, but also in large patches under particular environmental conditions.

  5. Spatial Factors in the Integration of Speed Information

    NASA Technical Reports Server (NTRS)

    Verghese, P.; Stone, L. S.; Hargens, Alan R. (Technical Monitor)

    1995-01-01

    We reported that, for a 21FC task with multiple Gabor patches in each interval, thresholds for speed discrimination decreased with the number of patches, while simply increasing the area of a single patch produced no such effect. This result could be explained by multiple patches reducing spatial uncertainty. However, the fact that thresholds decrease with number even when the patches are in fixed positions argues against this explanation. We therefore performed additional experiments to explore the lack of an area effect. Three observers did a 21FC speed discrimination task with 6 Gabor patches in each interval, and were asked to pick the interval in which the gratings moved faster. The 50% contrast patches were placed on a circle at 4 deg. eccentricity, either equally spaced and maximally separated (hexagonal array), or closely-spaced, in consecutive positions (string of pearls). For the string-of-pearls condition, the grating phases were either random, or consistent with a full-field grating viewed through multiple Gaussian windows. When grating phases were random, the thresholds for the hexagonal and string-of-pearls layouts were indistinguishable. For the string-of-pearls layout, thresholds in the consistent-phase condition were higher by 15 +/- 6% than in the random-phase condition. (Thresholds increased by 57 +/- 7% in going from 6 patches to a single patch of equivalent area.). For random-phase patches, the lower thresholds for 6 patches does not depend on a specific spacing or spatial layout. Multiple, closely-spaced, consistent-phase patches that can be interpreted as a single grating, result in thresholds closer to that produced by a single patch. Together, our results suggest that object segmentation may play a role in the integration of speed information.

  6. Comparison of two satellite imaging platforms for evaluating quasi-circular vegetation patch in the Yellow River Delta, China

    NASA Astrophysics Data System (ADS)

    Liu, Qingsheng; Liang, Li; Liu, Gaohuan; Huang, Chong

    2017-09-01

    Vegetation often exists as patch in arid and semi-arid region throughout the world. Vegetation patch can be effectively monitored by remote sensing images. However, not all satellite platforms are suitable to study quasi-circular vegetation patch. This study compares fine (GF-1) and coarse (CBERS-04) resolution platforms, specifically focusing on the quasicircular vegetation patches in the Yellow River Delta (YRD), China. Vegetation patch features (area, shape) were extracted from GF-1 and CBERS-04 imagery using unsupervised classifier (K-Means) and object-oriented approach (Example-based feature extraction with SVM classifier) in order to analyze vegetation patterns. These features were then compared using vector overlay and differencing, and the Root Mean Squared Error (RMSE) was used to determine if the mapped vegetation patches were significantly different. Regardless of K-Means or Example-based feature extraction with SVM classification, it was found that the area of quasi-circular vegetation patches from visual interpretation from QuickBird image (ground truth data) was greater than that from both of GF-1 and CBERS-04, and the number of patches detected from GF-1 data was more than that of CBERS-04 image. It was seen that without expert's experience and professional training on object-oriented approach, K-Means was better than example-based feature extraction with SVM for detecting the patch. It indicated that CBERS-04 could be used to detect the patch with area of more than 300 m2, but GF-1 data was a sufficient source for patch detection in the YRD. However, in the future, finer resolution platforms such as Worldview are needed to gain more detailed insight on patch structures and components and formation mechanism.

  7. Whole-Cell Electrical Activity Under Direct Mechanical Stimulus by AFM Cantilever Using Planar Patch Clamp Chip Approach

    PubMed Central

    Upadhye, Kalpesh V.; Candiello, Joseph E.; Davidson, Lance A.; Lin, Hai

    2011-01-01

    Patch clamp is a powerful tool for studying the properties of ion-channels and cellular membrane. In recent years, planar patch clamp chips have been fabricated from various materials including glass, quartz, silicon, silicon nitride, polydimethyl-siloxane (PDMS), and silicon dioxide. Planar patch clamps have made automation of patch clamp recordings possible. However, most planar patch clamp chips have limitations when used in combination with other techniques. Furthermore, the fabrication methods used are often expensive and require specialized equipments. An improved design as well as fabrication and characterization of a silicon-based planar patch clamp chip are described in this report. Fabrication involves true batch fabrication processes that can be performed in most common microfabrication facilities using well established MEMS techniques. Our planar patch clamp chips can form giga-ohm seals with the cell plasma membrane with success rate comparable to existing patch clamp techniques. The chip permits whole-cell voltage clamp recordings on variety of cell types including Chinese Hamster Ovary (CHO) cells and pheochromocytoma (PC12) cells, for times longer than most available patch clamp chips. When combined with a custom microfluidics chamber, we demonstrate that it is possible to perfuse the extra-cellular as well as intra-cellular buffers. The chamber design allows integration of planar patch clamp with atomic force microscope (AFM). Using our planar patch clamp chip and microfluidics chamber, we have recorded whole-cell mechanosensitive (MS) currents produced by directly stimulating human keratinocyte (HaCaT) cells using an AFM cantilever. Our results reveal the spatial distribution of MS ion channels and temporal details of the responses from MS channels. The results show that planar patch clamp chips have great potential for multi-parametric high throughput studies of ion channel proteins. PMID:22174731

  8. Lidocaine patches reduce pain in trauma patients with rib fractures.

    PubMed

    Zink, Karen A; Mayberry, John C; Peck, Ellen G; Schreiber, Martin A

    2011-04-01

    Rib fracture pain is notoriously difficult to manage. The lidocaine patch is effective in other pain scenarios with an excellent safety profile. This study assesses the efficacy of lidocaine patches for treating rib fracture pain. A prospectively gathered cohort of patients with rib fracture was retrospectively analyzed for use of lidocaine patches. Patients treated with lidocaine patches were matched to control subjects treated without patches. Subjective pain reports and narcotic use before and after patch placement, or equivalent time points for control subjects, were gathered from the chart. All patients underwent long-term follow-up, including a McGill Pain Questionnaire (MPQ). Twenty-nine patients with lidocaine patches (LP) and 29 matched control subjects (C) were analyzed. During the 24 hours before patch placement, pain scores and narcotic use were similar (LP 5.3, C 4.6, P = 0.19 and LP 51, C 32 mg morphine, P = 0.17). In the 24 hours after patch placement, LP patients had a greater decrease in pain scores (LP 1.2, C 0.0, P = 0.01) with no change in narcotic use (LP -8.4, C 0.5-mg change in morphine, P = 0.25). At 60 days, LP patients had a lower MPQ pain score (LP 7.7, C 12.2, P < 0.01), although only one patient was still using a patch. There was no difference in time to return to baseline activity (LP 73, C 105 days, P = 0.16) and no adverse events. Lidocaine patches are a safe, effective adjunct for rib fracture pain. Lidocaine patches resulted in a sustained reduction in pain, outlasting the duration of therapy.

  9. Macronutrient balancing affects patch departure by guerezas (Colobus guereza).

    PubMed

    Johnson, Caley A; Raubenheimer, David; Chapman, Colin A; Tombak, Kaia J; Reid, Andrea J; Rothman, Jessica M

    2017-04-01

    Foraging strategies are central in shaping social structure and grouping patterns in primates. We address Colobus guereza foraging strategies by investigating their patch departure decisions in relation to diet composition and nutrition. We examine whether guerezas are constrained in their intake of food in patches and thereby forage according to a fixed amount strategy that dictates patch departure. Additionally, we assess whether guereza employ a fixed time strategy or attempt to balance nutrients when foraging. We measured food patch occupancy time, intake rates, and analyzed foods for macronutrients, fiber, and condensed tannins. We determined that guerezas do not employ a fixed time foraging strategy; patch residence time varied widely between 1 and 290 min. They also did not depart patches or stop eating when they reached a specific intake of dry mass, macronutrients, or condensed tannins. However, guerezas maintained a macronutrient balance when feeding across patches, and the balance of protein to non-protein energy (fats and carbohydrates) in patches is the best indicator of time adult guerezas spent feeding in patches. Previous studies have shown that the protein-to-fiber ratio is important in predicting food selection for folivores and their biomass; however, we found that guerezas did not maximize protein and minimize fiber intake while foraging in patches, nor did they stay longer in patches with the highest ratio of protein to fiber concentrations. This study raises questions about the nutritional and social implications of patch depletion as a foraging strategy in folivorous monkeys where food limitation predicts competitive and social regimes. Am. J. Primatol. 79:e22495, 2017. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

  10. Two-year follow-up of a randomized trial of spectacles plus alternate-day patching to treat strabismic amblyopia.

    PubMed

    Agervi, Pia; Kugelberg, Ulla; Kugelberg, Maria; Zetterström, Charlotta

    2013-11-01

      To compare spectacles plus alternate-day patching for 8 hr or more with spectacles plus patching for 8 hr or more 6 days weekly to treat strabismic amblyopia 1 year after a 1-year randomized trial. Forty children (mean age, 4.3 years) participated. Refractive correction was provided. The children were assigned to alternate-day patching for 8 hr or more or patching for 8 hr or more daily 6 days weekly. VA, binocular function, and refractive errors were measured after 2 years. The main outcome measure was the median VA change in the amblyopic eye after 2 years. The median VA change in the amblyopic eye at the 2-year visit was significantly (p = 0.0453) greater with alternate-day patching (0.8 log unit) versus patching daily 6 days weekly (0.6 log unit). The final median VA in the amblyopic eyes was 0.0 logMAR in the alternate-day patching group and 0.1 logMAR in the daily patching group. Binocular function improved with both treatments. The median spherical equivalent (SE) refractive error increased in the fellow eyes (alternate-day patching, p < 0.0001; patching daily 6 days weekly, p = 0.0033); no change was found in the amblyopic eyes in either group. The magnitude of the VA change 2 years after treatment with spectacles plus alternate-day patching for 8 hr or more was significantly greater than with spectacles plus daily patching for 8 hr or more 6 days weekly for strabismic amblyopia. However, the final median VA did not differ significantly between the two treatments. © 2012 The Authors. Acta Ophthalmologica © 2012 Acta Ophthalmologica Scandinavica Foundation.

  11. Treatment of Neuropathic Pain with the Capsaicin 8% Patch: Is Pretreatment with Lidocaine Necessary?

    PubMed Central

    Kern, Kai-Uwe; Nowack, Walburga; Poole, Chris

    2014-01-01

    The capsaicin 8% patch can effectively treat neuropathic pain, but application can cause discomfort or a burning sensation. Until March 2013, it was recommended that patients be pretreated with a topical anesthetic, for example lidocaine, before capsaicin patch application. However, speculation existed over the need for pretreatment and its effectiveness in alleviating treatment-associated discomfort. This article compares tolerability to and efficacy of the capsaicin patch in pretreated and non-pretreated patients. All patients received a single capsaicin patch application. Pretreated patients received a lidocaine plaster before and intravenous lidocaine and metamizole infusions during capsaicin patch application. Pain levels, assessed using a Numeric Rating Scale (NRS), were used to determine tolerability and efficacy. All patients (pretreated n = 32; non-pretreated n = 26) completed 100% of the intended capsaicin patch application duration. At the time of capsaicin patch removal, 69% of pretreated and 88% of non-pretreated patients reported an NRS score increase, which returned to baseline by 6 hours post-treatment. There was no significant difference in mean NRS score between patient groups at any time during or after capsaicin patch treatment. Response was similar between patient groups; capsaicin patch treatment provided rapid and significant pain reductions that were sustained over 12 weeks. The same proportion of pretreated and non-pretreated patients reported willingness to receive retreatment with the capsaicin patch. This analysis shows that the capsaicin 8% patch is generally tolerable, and the small discomfort associated with patch application is short-lived. Lidocaine pretreatment does not have a significant effect on tolerability, efficacy, or patient willingness to receive retreatment. PMID:24289500

  12. Coevolution of patch-type dependent emigration and patch-type dependent immigration.

    PubMed

    Weigang, Helene C

    2017-08-07

    The three phases of dispersal - emigration, transfer and immigration - are affecting each other and the former and latter decisions may depend on patch types. Despite the inevitable fact of the complexity of the dispersal process, patch-type dependencies of dispersal decisions modelled as emigration and immigration are usually missing in theoretical dispersal models. Here, I investigate the coevolution of patch-type dependent emigration and patch-type dependent immigration in an extended Hamilton-May model. The dispersing population inhabits a landscape structured into many patches of two types and disperses during a continuous-time season. The trait under consideration is a four dimensional vector consisting of two values for emigration probability from the patches and two values for immigration probability into the patches of each type. Using the adaptive dynamics approach I show that four qualitatively different dispersal strategies may evolve in different parameter regions, including a counterintuitive strategy, where patches of one type are fully dispersed from (emigration probability is one) but individuals nevertheless always immigrate into them during the dispersal season (immigration probability is one). I present examples of evolutionary branching in a wide parameter range, when the patches with high local death rate during the dispersal season guarantee a high expected disperser output. I find that two dispersal strategies can coexist after evolutionary branching: a strategy with full immigration only into the patches with high expected disperser output coexists with a strategy that immigrates into any patch. Stochastic simulations agree with the numerical predictions. Since evolutionary branching is also found when immigration evolves alone, the present study is adding coevolutionary constraints on the emigration traits and hence finds that the coevolution of a higher dimensional trait sometimes hinders evolutionary diversification. Copyright © 2017 Elsevier Ltd. All rights reserved.

  13. Granisetron Transdermal Patch

    MedlinePlus

    ... patch. Each patch is stuck onto a thin plastic liner and a separate rigid plastic film. Do not open the pouch in advance, ... cut the patch into pieces. Peel the thin plastic liner off of the printed side of the ...

  14. Lidocaine Transdermal Patch

    MedlinePlus

    ... It works by stopping nerves from sending pain signals. ... time and the length of time you may wear the patches. Never apply more than three patches at one time, and never wear patches for more than 12 hours per day. ...

  15. A Regional-Scale Ocean Health Index for Brazil

    PubMed Central

    Elfes, Cristiane T.; Longo, Catherine; Halpern, Benjamin S.; Hardy, Darren; Scarborough, Courtney; Best, Benjamin D.; Pinheiro, Tiago; Dutra, Guilherme F.

    2014-01-01

    Brazil has one of the largest and fastest growing economies and one of the largest coastlines in the world, making human use and enjoyment of coastal and marine resources of fundamental importance to the country. Integrated assessments of ocean health are needed to understand the condition of a range of benefits that humans derive from marine systems and to evaluate where attention should be focused to improve the health of these systems. Here we describe the first such assessment for Brazil at both national and state levels. We applied the Ocean Health Index framework, which evaluates ten public goals for healthy oceans. Despite refinements of input data and model formulations, the national score of 60 (out of 100) was highly congruent with the previous global assessment for Brazil of 62. Variability in scores among coastal states was most striking for goals related to mariculture, protected areas, tourism, and clean waters. Extractive goals, including Food Provision, received low scores relative to habitat-related goals, such as Biodiversity. This study demonstrates the applicability of the Ocean Health Index at a regional scale, and its usefulness in highlighting existing data and knowledge gaps and identifying key policy and management recommendations. To improve Brazil's ocean health, this study suggests that future actions should focus on: enhancing fisheries management, expanding marine protected areas, and monitoring coastal habitats. PMID:24695103

  16. Twenty years of global groundwater research: A Science Citation Index Expanded-based bibliometric survey (1993-2012)

    NASA Astrophysics Data System (ADS)

    Niu, Beibei; Loáiciga, Hugo A.; Wang, Zhen; Zhan, F. Benjamin; Hong, Song

    2014-11-01

    A bibliometric analysis was conducted to evaluate groundwater research from different perspectives in the period 1993-2012 based on the Science Citation Index-Expanded (SCIE) database. The bibliometric analysis summarizes output, categorical, geographical, and institutional patterns, as well as research hotspots in global groundwater studies. Groundwater research experienced notable growth in the past two decades. ;Environmental sciences;, ;water resources; and ;multidisciplinary geosciences; were the three major subject categories. The Journal of Hydrology published the largest number of groundwater-related publications in the surveyed period. Major author clusters and research regions are located in the United States, Western Europe, Eastern and Southern Asia, and Eastern Australia. The United States was a leading contributor to global groundwater research with the largest number of independent and collaborative papers, its dominance affirmed by housing 12 of the top 20 most active institutions reporting groundwater-related research. The US Geological Survey, the Chinese Academy of Sciences, and the USDA Agricultural Research Service were the three institutions with the largest number of groundwater-related publications. A keywords analysis revealed that groundwater quality and contamination, effective research technologies, and treatment technologies for water-quality improvement were the main research areas in the study period. Several keywords such as ;arsenic;, ;climate change;, ;fluoride;, ;groundwater management;, ;hydrogeochemistry;, ;uncertainty;, ;numerical modeling;, ;seawater intrusion;, ;adsorption;, ;remote sensing;, ;land use;, ;USA;(as study site), and ;water supply; received dramatically increased attention during the study period, possibly signaling future research trends.

  17. Does switching contraceptive from oral to a patch or vaginal ring change the likelihood of timely prescription refill?

    PubMed

    Law, Amy; Lee, Yi-Chien; Gorritz, Magdaliz; Plouffe, Leo

    2014-08-01

    This study evaluated contraceptive refill patterns of women insured commercially in the US who switched from oral contraceptives (OCs) to the patch or vaginal ring and assessed if switching contraceptive methods changes refill patterns. Women aged 15-44 with ≥2 patch or ring prescriptions and ≥2 OC prescriptions before the first patch/ring prescription were identified from the MarketScan® Commercial database (1/1/2002-6/30/2011). Refill patterns 1-year pre- and postindex date (first patch/ring prescription) were evaluated, and women were categorized as timely or delayed refillers on OCs and patch/ring. Regression modeling was used to investigate the association between refill patterns and contraceptive methods and switching effects on refill patterns. Of 17,814 women identified, 7901 switched to the patch, and 9913 switched to the ring. Among timely OC refillers, the percentage of timely refills decreased (patch: 95.6% to 79.4%, p<.001; ring: 96.5% to 74.3%, p<.001). However, among delayed OC refillers, the percentage of timely refills improved (patch: 47.9% to 72.2%, p<.001; ring: 50.4% to 64.0%, p<.001) during patch/ring use. Nonetheless, compared to timely OC refillers, women who were delayed OC refillers had 1.68-fold [95% confidence interval (CI): 1.52-1.84, p<.001] and 1.85-fold greater odds (CI: 1.69-2.02, p<.001) of being a delayed refiller while on the patch and ring, respectively. Switching to the patch or ring may improve refill behavior for women who have problems refilling OCs timely; however, the magnitude of the improvement may fail to improve ultimate contraceptive efficacy by simply switching to the patch or ring. The impact on timely refills of switching from OCs to either the patch or ring is complex and varies depending on the pattern of timely refills on OCs. Copyright © 2014 Elsevier Inc. All rights reserved.

  18. Heterogeneity of clonal patterns among patches of kudzu, Pueraria montana var. lobata, an invasive plant

    PubMed Central

    Kartzinel, Tyler R.; Hamrick, J. L.; Wang, Chongyun; Bowsher, Alan W.; Quigley, Bryan G. P.

    2015-01-01

    Background and Aims Viny species are among the most serious invasive plants, and better knowledge of how vines grow to dominate landscapes is needed. Patches may contain a single genotype (i.e. genet), a competitively dominant genet or many independent but interacting genets, yet the clonal structure of vining species is often not apparent. Molecular markers can discriminate among the genetic identities of entwined vines to reveal the number and spatial distribution of genets. This study investigated how genets are spatially distributed within and among discrete patches of the invasive vine kudzu, Pueraria montana var. lobata, in the United States. It was expected that ramets of genets would be spatially clustered within patches, and that an increase in the number of genets within a patch would be associated with a decrease in the average size of each genet. Methods Six discrete kudzu patches were sampled across 2 years, and 1257 samples were genotyped at 21 polymorphic allozyme loci. Variation in genotypic and genetic diversity among patches was quantified and patterns of genet interdigitation were analysed. Key Results Substantial genotypic and genetic variation occurred within and among patches. As few as ten overlapping genets spanned up to 68 m2 in one patch, while >90 % of samples were genetically unique in another patch. Genotypic diversity within patches increased as mean clone size decreased, although spatially widespread genets did not preclude interdigitation. Eight genets were shared across ≥2 patches, suggesting that vegetative dispersal can occur among patches. Conclusions Genetically unique kudzu vines are highly interdigitated. Multiple vegetative propagules have become established in spatially discrete patches, probably through the movement of highway construction or maintenance machinery. The results suggest that common methods for controlling invasive vines (e.g. mowing) may inadvertently increase genotypic diversity. Thus, understanding vine architecture and growth has practical implications. PMID:26229064

  19. Effects of Intra- and Interpatch Host Density on Egg Parasitism by Three Species of Trichogramma

    PubMed Central

    Grieshop, Matthew J.; Flinn, Paul W.; Nechols, James R.

    2010-01-01

    Host-foraging responses to different intra- and interpatch densities were used to assess three Trichogramma spp. (Hymenoptera: Trichogrammatidae) Trichogramma deion Pinto and Oatman, T. ostriniae Pang and Chen, and T. pretiosum Riley — as potential biological control agents for the Indian meal moth, Plodia interpunctella Hübner (Lepidoptera: Pyralidae). Single naïve females were allowed 6 h to forage in Plexiglas arenas with four different spatial arrangements of host eggs, nine single-egg patches), nine four-egg patches, 36 single-egg patches, and 36 four-egg patches. No significant differences were found among species in the number of patches parasitized. As expected, all three species parasitized the most eggs in the 36 four-egg patch treatment and the least in the nine single-egg patch treatment. T. deion parasitized significantly more eggs than T. pretiosum on the nine four-egg patches. T. ostriniae parasitized significantly more patches when intrapatch density was greater, regardless of interpatch density. In contrast, T. deion only parasitized more patches at the greater intrapatch density when the interpatch density was low. Patch density had no effect on T. pretiosum. The spatial pattern of parasitism was more aggregated for T. deion and T. ostriniae in the 36 four-egg patches treatment compared to the 36 single-egg patches treatment. Therefore, intrapatch density was more important than interpatch density for T. ostriniae, and potentially for T. deion, but not for T. pretiosum. T. deion may be the best candidate for augmentative biological control because it parasitized either slightly or significantly more eggs than the other two species in all four treatments. Furthermore, the pattern of parasitism by T. deion in the 36 four-egg patches treatment was the most aggregated among the three species, suggesting a more thorough searching pattern. In contrast, T. pretiosum had the least aggregated pattern of parasitism and therefore may have used a more random foraging pattern. PMID:20673123

  20. Effects of intra- and interpatch host density on egg parasitism by three species of Trichogramma.

    PubMed

    Grieshop, Matthew J; Flinn, Paul W; Nechols, James R

    2010-01-01

    Host-foraging responses to different intra- and interpatch densities were used to assess three Trichogramma spp. (Hymenoptera: Trichogrammatidae) Trichogramma deion Pinto and Oatman, T. ostriniae Pang and Chen, and T. pretiosum Riley - as potential biological control agents for the Indian meal moth, Plodia interpunctella Hübner (Lepidoptera: Pyralidae). Single naïve females were allowed 6 h to forage in Plexiglas arenas with four different spatial arrangements of host eggs, nine single-egg patches), nine four-egg patches, 36 single-egg patches, and 36 four-egg patches. No significant differences were found among species in the number of patches parasitized. As expected, all three species parasitized the most eggs in the 36 four-egg patch treatment and the least in the nine single-egg patch treatment. T. deion parasitized significantly more eggs than T. pretiosum on the nine four-egg patches. T. ostriniae parasitized significantly more patches when intrapatch density was greater, regardless of interpatch density. In contrast, T. deion only parasitized more patches at the greater intrapatch density when the interpatch density was low. Patch density had no effect on T. pretiosum. The spatial pattern of parasitism was more aggregated for T. deion and T. ostriniae in the 36 four-egg patches treatment compared to the 36 single-egg patches treatment. Therefore, intrapatch density was more important than interpatch density for T. ostriniae, and potentially for T. deion, but not for T. pretiosum. T. deion may be the best candidate for augmentative biological control because it parasitized either slightly or significantly more eggs than the other two species in all four treatments. Furthermore, the pattern of parasitism by T. deion in the 36 four-egg patches treatment was the most aggregated among the three species, suggesting a more thorough searching pattern. In contrast, T. pretiosum had the least aggregated pattern of parasitism and therefore may have used a more random foraging pattern.

  1. Disentangling the role of seed bank and dispersal in plant metapopulation dynamics using patch occupancy surveys.

    PubMed

    Manna, F; Pradel, R; Choquet, R; Fréville, H; Cheptou, P-O

    2017-10-01

    In plants, the presence of a seed bank challenges the application of classical metapopulation models to aboveground presence surveys; ignoring seed bank leads to overestimated extinction and colonization rates. In this article, we explore the possibility to detect seed bank using hidden Markov models in the analysis of aboveground patch occupancy surveys of an annual plant with limited dispersal. Patch occupancy data were generated by simulation under two metapopulation sizes (N = 200 and N = 1,000 patches) and different metapopulation scenarios, each scenario being a combination of the presence/absence of a 1-yr seed bank and the presence/absence of limited dispersal in a circular 1-dimension configuration of patches. In addition, because local conditions often vary among patches in natural metapopulations, we simulated patch occupancy data with heterogeneous germination rate and patch disturbance. Seed bank is not observable from aboveground patch occupancy surveys, hence hidden Markov models were designed to account for uncertainty in patch occupancy. We explored their ability to retrieve the correct scenario. For 10 yr surveys and metapopulation sizes of N = 200 or 1,000 patches, the correct metapopulation scenario was detected at a rate close to 100%, whatever the underlying scenario considered. For smaller, more realistic, survey duration, the length for a reliable detection of the correct scenario depends on the metapopulation size: 3 yr for N = 1,000 and 6 yr for N = 200 are enough. Our method remained powerful to disentangle seed bank from dispersal in the presence of patch heterogeneity affecting either seed germination or patch extinction. Our work shows that seed bank and limited dispersal generate different signatures on aboveground patch occupancy surveys. Therefore, our method provides a powerful tool to infer metapopulation dynamics in a wide range of species with an undetectable life form. © 2017 by the Ecological Society of America.

  2. Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification

    PubMed Central

    Hou, Le; Samaras, Dimitris; Kurc, Tahsin M.; Gao, Yi; Davis, James E.; Saltz, Joel H.

    2016-01-01

    Convolutional Neural Networks (CNN) are state-of-the-art models for many image classification tasks. However, to recognize cancer subtypes automatically, training a CNN on gigapixel resolution Whole Slide Tissue Images (WSI) is currently computationally impossible. The differentiation of cancer subtypes is based on cellular-level visual features observed on image patch scale. Therefore, we argue that in this situation, training a patch-level classifier on image patches will perform better than or similar to an image-level classifier. The challenge becomes how to intelligently combine patch-level classification results and model the fact that not all patches will be discriminative. We propose to train a decision fusion model to aggregate patch-level predictions given by patch-level CNNs, which to the best of our knowledge has not been shown before. Furthermore, we formulate a novel Expectation-Maximization (EM) based method that automatically locates discriminative patches robustly by utilizing the spatial relationships of patches. We apply our method to the classification of glioma and non-small-cell lung carcinoma cases into subtypes. The classification accuracy of our method is similar to the inter-observer agreement between pathologists. Although it is impossible to train CNNs on WSIs, we experimentally demonstrate using a comparable non-cancer dataset of smaller images that a patch-based CNN can outperform an image-based CNN. PMID:27795661

  3. Ground Motions Due to Earthquakes on Creeping Faults

    NASA Astrophysics Data System (ADS)

    Harris, R.; Abrahamson, N. A.

    2014-12-01

    We investigate the peak ground motions from the largest well-recorded earthquakes on creeping strike-slip faults in active-tectonic continental regions. Our goal is to evaluate if the strong ground motions from earthquakes on creeping faults are smaller than the strong ground motions from earthquakes on locked faults. Smaller ground motions might be expected from earthquakes on creeping faults if the fault sections that strongly radiate energy are surrounded by patches of fault that predominantly absorb energy. For our study we used the ground motion data available in the PEER NGA-West2 database, and the ground motion prediction equations that were developed from the PEER NGA-West2 dataset. We analyzed data for the eleven largest well-recorded creeping-fault earthquakes, that ranged in magnitude from M5.0-6.5. Our findings are that these earthquakes produced peak ground motions that are statistically indistinguishable from the peak ground motions produced by similar-magnitude earthquakes on locked faults. These findings may be implemented in earthquake hazard estimates for moderate-size earthquakes in creeping-fault regions. Further investigation is necessary to determine if this result will also apply to larger earthquakes on creeping faults. Please also see: Harris, R.A., and N.A. Abrahamson (2014), Strong ground motions generated by earthquakes on creeping faults, Geophysical Research Letters, vol. 41, doi:10.1002/2014GL060228.

  4. Engineered hybrid cardiac patches with multifunctional electronics for online monitoring and regulation of tissue function

    PubMed Central

    Feiner, Ron; Engel, Leeya; Fleischer, Sharon; Malki, Maayan; Gal, Idan; Shapira, Assaf; Shacham-Diamand, Yosi; Dvir, Tal

    2016-01-01

    In cardiac tissue engineering approaches to treat myocardial infarction, cardiac cells are seeded within three-dimensional porous scaffolds to create functional cardiac patches. However, current cardiac patches do not allow for online monitoring and reporting of engineered-tissue performance, and do not interfere to deliver signals for patch activation or to enable its integration with the host. Here, we report an engineered cardiac patch that integrates cardiac cells with flexible, free-standing electronics and a 3D nanocomposite scaffold. The patch exhibited robust electronic properties, enabling the recording of cellular electrical activities and the on-demand provision of electrical stimulation for synchronizing cell contraction. We also show that electroactive polymers containing biological factors can be deposited on designated electrodes to release drugs in the patch microenvironment on-demand. We expect that the integration of complex electronics within cardiac patches will eventually provide therapeutic control and regulation of cardiac function. PMID:26974408

  5. The use of epoxy patch grafts for the repair of experimentally-created diaphragmatic defects in dogs.

    PubMed

    Matsumoto, H; Oguchi, Y; Miyake, Y; Masuda, Y; Masada, S; Kuno, Y; Shibahara, I; Takashima, K; Yamane, H; Yamagata, S; Noishiki, Y; Yamane, Y

    1996-07-01

    Canine pericardium which had been treated with polyepoxy compounds (Denacol EX-313) was used as a patch graft for the correction of experimentally-created diaphragmatic defects in five dogs belonging to the same litter. Clinical, macroscopic and histological examinations were conducted every month up to five months after suturing of the patch graft. Clinical examination of the patch graft showed no apparent abnormalities. Macroscopic examination conducted during autopsy showed that the patch graft maintained adequate elasticity for five months after suturing, the surface of the patch graft was covered with a thin membrane and neovascularization was observed. Histological examination showed that the surface of the patch graft was covered with a thin membrane. Inflammatory tissue reactions were observed at one month, but gradually decreased from the second month onwards. In addition, the patch graft had excellent tissue affinity.

  6. The modeling of piezoceramic patch interactions with shells, plates and beams

    NASA Technical Reports Server (NTRS)

    Banks, H. T.; Smith, R. C.

    1992-01-01

    General models describing the interactions between a pair of piezoceramic patches and elastic substructures consisting of a cylindrical shell, plate and beam are presented. In each case, the manner in which the patch loads enter both the strong and weak forms of the time-dependent structural equations of motion is described. Through force and moment balancing, these loads are then determined in terms of material properties of the patch and substructure (thickness, elastic properties, Poisson ratios), the geometry of the patch placement, and the voltages into the patches. In the case of the shell, the coupling between banding and inplane deformations, which is due to the curvature, is retained. These models are sufficiently general to allow for potentially different patch voltages which implies that they can be suitably employed when using piezoceramic patches for controlling system dynamics when both extensional and bending vibrations are present.

  7. Engineered hybrid cardiac patches with multifunctional electronics for online monitoring and regulation of tissue function.

    PubMed

    Feiner, Ron; Engel, Leeya; Fleischer, Sharon; Malki, Maayan; Gal, Idan; Shapira, Assaf; Shacham-Diamand, Yosi; Dvir, Tal

    2016-06-01

    In cardiac tissue engineering approaches to treat myocardial infarction, cardiac cells are seeded within three-dimensional porous scaffolds to create functional cardiac patches. However, current cardiac patches do not allow for online monitoring and reporting of engineered-tissue performance, and do not interfere to deliver signals for patch activation or to enable its integration with the host. Here, we report an engineered cardiac patch that integrates cardiac cells with flexible, freestanding electronics and a 3D nanocomposite scaffold. The patch exhibited robust electronic properties, enabling the recording of cellular electrical activities and the on-demand provision of electrical stimulation for synchronizing cell contraction. We also show that electroactive polymers containing biological factors can be deposited on designated electrodes to release drugs in the patch microenvironment on demand. We expect that the integration of complex electronics within cardiac patches will eventually provide therapeutic control and regulation of cardiac function.

  8. Self-reported and verified compliance in a phase 3 clinical trial of a novel low-dose contraceptive patch and pill.

    PubMed

    Kaunitz, Andrew M; Portman, David; Westhoff, Carolyn L; Archer, David F; Mishell, Daniel R; Foegh, Marie

    2015-03-01

    Pregnancy rates in US contraceptive clinical trials are increasing due to decreased treatment compliance. This study compared compliance with a new low-dose levonorgestrel (LNG) and ethinyl estradiol (EE) contraceptive patch (CP, Twirla™) with that of a low-dose combination oral contraceptive (COC) in a demographically diverse population. This analysis was part of an open-label, parallel-group, multicenter phase 3 study that randomized healthy sexually active women (17-40years) to 13cycles of LNG/EE CP or 6cycles of COC, then 7cycles of LNG/EE CP. We defined self-reported compliance as cycles that, according to diaries, show 21days of patch wear without missed days or any patch worn >7days or 21days of pill-taking without missed pill days. We verified compliance by detectable plasma presence of LNG and EE at cycles 2, 6, and 13. Of the intention-to-treat population with diary information (N=1328, mean age 26.4years, 46% minorities, 33% obese), 10.0% of the CP (n=998) versus 21.2% of the COC group (n=330) self-reported noncompliance after 6cycles (p<.001). Laboratory assessments verified 10-14% of participants in both groups as noncompliant. Self-reported perfect use did not vary between obese [body mass index (BMI) ≥30kg/m(2)] versus nonobese (BMI <30kg/m(2)) participants in both groups or when stratified by age, education, or race/ethnicity in the CP group. Self-reported compliance was significantly greater in the CP than COC group and did not vary by obesity status. Discrepancies between self-reported and verified compliance question reliability of patient diaries. This paper, based on an analysis of a phase 3 trial, shows that compliance was significantly greater with a new weekly transdermal CP than with a once-daily COC in obese as well as nonobese participants. Discrepancies between self-reported compliance and laboratory-verified compliance raise questions regarding the reliability of patient diaries. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. Density of Diadema antillarum (Echinodermata: Echinoidea) on live coral patch reefs and dead Acropora cervicornis rubble patches near Loggerhead Key, Dry Tortugas National Park, Florida, USA

    EPA Science Inventory

    Density of adult Diadema antillarum was assessed on live coral patch reefs and dead Acropora cervicornis rubble patches next to Loggerhead Key, Dry Tortugas National Park, Florida, USA in June 2009. Mean density on live coral patch reefs (0.49 individuals m-2) was not statistical...

  10. Improved Gain Microstrip Patch Antenna

    DTIC Science & Technology

    2015-08-06

    08-2015 Publication Improved Gain Microstrip Patch Antenna David A. Tonn Naval Under Warfare Center Division, Newport 1176 Howell St., Code 00L...GAIN MICROSTRIP PATCH ANTENNA STATEMENT OF GOVERNMENT INTEREST [0001] The invention described herein may be manufactured and used by or for the...patch antenna having increased gain, and an apparatus for increasing the gain and bandwidth of an existing microstrip patch antenna . (2) Description

  11. Buccal patches of atenolol formulated using fenugreek (Trigonella foenum-graecum L.) seed mucilage.

    PubMed

    Adhikari, Surya Narayan Ratha; Panda, Satyabrata

    2017-01-01

    The use of mucoadhesive natural polymers in designing mucoadhesive patch systems has received much attention. The study involved the development and evaluation of buccal patches of atenolol using fenugreek (Trigonella foenum-graecum L.) seed mucilage with hydroxylpropyl methyl cellulose (HPMC K4M) and a backing membrane (ethyl cellulose 5% w/v). These atenolol-releasing buccal patches were prepared using a solvent casting technique. The buccal patches prepared were evaluated for average weight, thickness, drug content, folding endurance and moisture content. Ex vivo mucoadhesive strength, force of adhesion and bonding strength were determined using porcine buccal mucosa. The mucosal permeation of atenolol through the porcine buccal mucosa was carried out using a Franz diffusion cell in phosphate buffer saline, pH 6.8. These buccal patches were also characterized by SEM and FTIR spectroscopy. The average weight, thickness, drug content, folding endurance and moisture content of these atenolol-releasing buccal patches were found satisfactory for all the patches. Amongst all, the F-4 buccal patch showed maximum mucoadhesive strength (31.12 ±1.86 g), force of adhesion (30.53 × 10-2 N) and bond strength (1748.89 N/m2). Ex vivo atenolol permeation from the buccal patches showed drug permeation across the excised porcine buccal mucosa over 12 h. The F-4 buccal patch showed maximum permeation flux (29.12 μg/cm2/h). The developed atenolol-releasing buccal patches can be beneficial over the conventional drug delivery systems to decrease the dosing frequency and enhance patient compliance.

  12. Dye-enhanced protein solders and patches in laser-assisted tissue welding.

    PubMed

    Small, W; Heredia, N J; Maitland, D J; Da Silva, L B; Matthews, D L

    1997-01-01

    This study examines the use of dye-enhanced protein bonding agents in 805 nm diode laser-assisted tissue welding. A comparison of an albumin liquid solder and collagen solid-matrix patches used to repair arteriotomies in an in vitro porcine model is presented. Extrinsic bonding media in the form of solders and patches have been used to enhance the practice of laser tissue welding. Preferential absorption of the laser wavelength has been achieved by the incorporation of chromophores. Both the solder and the patch included indocyanine green dye (ICG) to absorb the 805 nm continuous-wave diode laser light used to perform the welds. Solder-mediated welds were divided into two groups (high power/short exposure and low power/long exposure), and the patches were divided into three thickness groups ranging from 0.1 to 1.3 mm. The power used to activate the patches was constant, but the exposure time was increased with patch thickness. Burst pressure results indicated that solder-mediated and patched welds yielded similar average burst strengths in most cases, but the patches provided a higher success rate (i.e., more often exceeded 150 mmHg) and were more consistent (i.e., smaller standard deviation) than the solder. The strongest welds were obtained using 1.0-1.3 mm thick patches, while the high power/short exposure solder group was the weakest. Though the solder and patches yielded similar acute weld strengths, the solid-matrix patches facilitated the welding process and provided consistently strong welds. The material properties of the extrinsic agents influenced their performance.

  13. Does body size affect a bird's sensitivity to patch size and landscape structure?

    USGS Publications Warehouse

    Winter, Maiken; Johnson, Douglas H.; Shaffer, Jill A.

    2006-01-01

    Larger birds are generally more strongly affected by habitat loss and fragmentation than are smaller ones because they require more resources and thus larger habitat patches. Consequently, conservation actions often favor the creation or protection of larger over smaller patches. However, in grassland systems the boundaries between a patch and the surrounding landscape, and thus the perceived size of a patch, can be indistinct. We investigated whether eight grassland bird species with different body sizes perceived variation in patch size and landscape structure in a consistent manner. Data were collected from surveys conducted in 44 patches of northern tallgrass prairie during 1998–2001. The response to patch size was very similar among species regardless of body size (density was little affected by patch size), except in the Greater Prairie-Chicken (Tympanuchus cupido), which showed a threshold effect and was not found in patches smaller than 140 ha. In landscapes containing 0%–30% woody vegetation, smaller species responded more negatively to increases in the percentage of woody vegetation than larger species, but above an apparent threshold of 30%, larger species were not detected. Further analyses revealed that the observed variation in responses to patch size and landscape structure among species was not solely due to body size per se, but to other differences among species. These results indicate that a stringent application of concepts requiring larger habitat patches for larger species appears to limit the number of grassland habitats that can be protected and may not always be the most effective conservation strategy.

  14. Resource availability, matrix quality, microclimate, and spatial pattern as predictors of patch use by the Karner blue butterfly

    USGS Publications Warehouse

    Grundel, R.; Pavlovic, N.B.

    2007-01-01

    Determination of which aspects of habitat quality and habitat spatial arrangement best account for variation in a species’ distribution can guide management for organisms such as the Karner blue butterfly (Lycaeides melissa samuelis), a federally endangered subspecies inhabiting savannas of Midwest and Eastern United States. We examined the extent to which three sets of predictors, (1) larval host plant (Lupinus perennis, wild lupine) availability, (2) characteristics of the matrix surrounding host plant patches, and (3) factors affecting a patch’s thermal environment, accounted for variation in lupine patch use by Karner blues at Indiana Dunes National Lakeshore, Indiana and Fort McCoy, Wisconsin, USA. Each predictor set accounted for 7–13% of variation in patch occupancy by Karner blues at both sites and in larval feeding activity among patches at Indiana Dunes. Patch area, an indicator of host plant availability, was an exception, accounting for 30% of variation in patch occupancy at Indiana Dunes. Spatially structured patterns of patch use across the landscape accounted for 9–16% of variation in patch use and explained more variation in larval feeding activity than did spatial autocorrelation between neighboring patches. Because of this broader spatial trend across sites, a given management action may be more effective in promoting patch use in some portions of the landscape than in others. Spatial trend, resource availability, matrix quality, and microclimate, in general, accounted for similar amounts of variation in patch use and each should be incorporated into habitat management planning for the Karner blue butterfly.

  15. Predation-related odours reduce oviposition in a herbivorous mite.

    PubMed

    Choh, Yasuyuki; Uefune, Masayoshi; Takabayashi, Junji

    2010-01-01

    When adult females of the herbivorous mite, Tetranychus urticae, were exposed to the predatory mite, Phytoseiulus persimilis, they laid fewer eggs than females that had not been exposed to P. persimilis when transferred onto a new leaf patch. However, when T. urticae females were exposed to either products of P. persimilis or artificially damaged conspecific eggs on a leaf patch, the number of T. urticae eggs on a new leaf patch did not differ significantly from the control. The reduced oviposition was neither due to the feeding activity on the leaf patch with P. persimilis nor to that on the new leaf patch. There was also no significant difference between the number of T. urticae eggs produced on a new leaf patch following exposure to the odours of a neighbouring leaf patch where there had previously been either P. persimilis or T. urticae adults. However, female T. urticae that had been exposed to odours from neighbouring leaf patches on which both T. urticae and P. persimilis had been placed produced significantly fewer eggs on a new leaf patch than those that had not been exposed to such odours. Neither odours from neighbouring intact leaf patches on which T. urticae eggs were preyed on by P. persimilis, nor odours from a neighbouring Parafilm patch on which T. urticae was preyed on by P. persimilis affected the oviposition of T. urticae. These data suggest that the presence of T. urticae, P. persimilis and a leaf patch are needed for the emission of odours to reduce oviposition in T. urticae.

  16. Transdermal patches: history, development and pharmacology.

    PubMed

    Pastore, Michael N; Kalia, Yogeshvar N; Horstmann, Michael; Roberts, Michael S

    2015-05-01

    Transdermal patches are now widely used as cosmetic, topical and transdermal delivery systems. These patches represent a key outcome from the growth in skin science, technology and expertise developed through trial and error, clinical observation and evidence-based studies that date back to the first existing human records. This review begins with the earliest topical therapies and traces topical delivery to the present-day transdermal patches, describing along the way the initial trials, devices and drug delivery systems that underpin current transdermal patches and their actives. This is followed by consideration of the evolution in the various patch designs and their limitations as well as requirements for actives to be used for transdermal delivery. The properties of and issues associated with the use of currently marketed products, such as variability, safety and regulatory aspects, are then described. The review concludes by examining future prospects for transdermal patches and drug delivery systems, such as the combination of active delivery systems with patches, minimally invasive microneedle patches and cutaneous solutions, including metered-dose systems. © 2015 The British Pharmacological Society.

  17. Highly Cited Occupational Therapy Articles in the Science Citation Index Expanded and Social Sciences Citation Index: A Bibliometric Analysis.

    PubMed

    Brown, Ted; Gutman, Sharon A; Ho, Yuh-Shan; Fong, Kenneth N K

    A bibliometric analysis was completed of highly cited occupational therapy literature and authors published from 1991 to 2014 and accessible in the Science Citation Index Expanded (SCI-Expanded) and Social Sciences Citation Index (SSCI) databases. Data were obtained from the SCI-Expanded and SSCI. Articles referenced >100 times were categorized as highly cited articles (HCA). Of 6,486 articles found, 31 were categorized as HCA. The American Journal of Occupational Therapy published the largest number of HCA (n = 8; 26%). The 31 HCA were distributed across seven countries: United States (20 articles), Canada (3), United Kingdom (3), Australia (2), the Netherlands (1), New Zealand (1), and Sweden (1). The three authors with the highest Y-index were S. J. Page, F. Clark, and W. Dunn. A latency period of 4 to 5 yr post-publication appears to be needed for a journal article to gain citations. Copyright © 2017 by the American Occupational Therapy Association, Inc.

  18. Taking Advantage of Citation Measures of Scholarly Impact: Hip Hip h Index!

    PubMed

    Ruscio, John

    2016-11-01

    Professional decisions about hiring, tenure, promotion, funding, and honors are informed by assessments of scholarly impact. As a measure of influence, citations are produced by experts but accessible to nonexperts. The h index is the largest number h such that an individual has published at least h works cited at least h times apiece. This is easy to understand and calculate, as or more reliable and valid than alternative citation measures, and highly robust to missing or messy data. Striving for a large h index requires both productivity and influence, which provides healthy incentives for researchers striving for eminence through scientific impact. A number of factors that can influence h are discussed to promote the mindful use of what might otherwise be an ambiguous or misleading measure. The h index adds a transparent, objective component to assessments of scholarly impact, and even academic eminence, that merits at least two cheers. © The Author(s) 2016.

  19. Patch test results in patients with allergic contact dermatitis in the Podlasie region

    PubMed Central

    Bacharewicz, Joanna; Pawłoś, Anna

    2013-01-01

    Introduction The aim of the study was to provide current data on the incidence of allergy to various contact allergens in patients with allergic contact eczema and the analysis of selected socio-demographic data of the patients. Material and methods The study included 1532 patients (1010 women and 522 men) treated for allergic contact dermatitis at the Department of Dermatology and Venereology and at the Dermatology Outpatient Clinic in Bialystok in 2007–2011. The assessment of selected demographic data and skin lesions was based on the MOAHFLA index, while the results of patch tests were analyzed with modified Baseline European Series consisting of 31 allergens. Results In the group of patients with eczema, 34.1% were men, and 55% of all respondents were people over 40 years of age. The occupational character of skin lesions was found in 22.5%. Most frequently (38.9%) skin lesions were localized on the hands, rarely involved legs (3.98%). Atopic dermatitis was diagnosed in 4.5% of patients. The ten most frequent allergens were: nickel sulfate (24%), cobalt chloride (15.3%), fragrance mix (8.25%), potassium dichromate (6.8%), balsam of Peru (5.5%), neomycin (4.42%), paraphenylenediamine (3.85%), Quatermium-15 (2.1%), detreomycin (1.83%) and budesonide (1.44% of tested patients). Conclusions Frequent allergy to detreomycin indicates the need of patch testing for this allergen of all examined patients with allergic contact dermatitis. The increased frequency of the nickel allergy is a worrying problem and indicates the need for education about the risk factors for nickel allergy development and the implementation of appropriate legal regulations. PMID:24493997

  20. [Treatment of Fallot tetralogy with a transannular patch. Six years follow-up].

    PubMed

    Galicia-Tornell, Myriam; Reyes-López, Alfonso; Ruíz-González, Sergio; Bolio-Cerdán, Alejandro; González-Ojeda, Alejandro; Fuentes-Orozco, Clotilde

    2015-01-01

    Primary repair of Fallot tetralogy has been performed successfully for the last 45 years. It has low surgical mortality (< 5%), with excellent long-term results. However, there are delayed adverse effects: progressive right ventricular dilation and dysfunction, arrhythmia, and sudden death. In our centre, Fallot tetralogy is the most common form of cyanotic congenital heart disease (including transannular patch) and accounts for 7.5% of all cardiovascular surgical procedures. The mid-term follow-up results are reported. Case series. The study included patients who had complete repair of Fallot tetralogy with transannular patch from January 2000 to December 2009. An analysis was performed on the clinical variables, morbidity and mortality. There were 52 patients in the study, with mean age 4 ± 2 years. Perioperative mortality in 6 patients, with 5 associated with residual right ventricular obstruction and, 1 associated with further surgery. The survival rate was 88% (46) patients, with a follow-up 75 ± 26 months. Late morbidity occurred in 14, due to right ventricular dysfunction in 11, recurrent distal obstruction in 2, and residual ventricular septal defect in 1. Associated risk factors were severe pulmonary insufficiency (p=0.001); QRS > 160 ms, p=0.001); cardiothoracic > 0.60 index, (p=0.048), and tricuspid regurgitation (p=0.001). There was reasonable long-term survival and excellent quality of life after total correction of Fallot tetralogy; however, progressive right ventricular dysfunction requires continuous monitoring, as well as the choice of optimal timing of pulmonary valve replacement. Copyright © 2015 Academia Mexicana de Cirugía A.C. Published by Masson Doyma México S.A. All rights reserved.

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