Science.gov

Sample records for lattice site location

  1. Improvement of lattice site location of Ga implanted into Al after pulsed electron beam annealing

    NASA Astrophysics Data System (ADS)

    Hussain, T.; Geerk, J.; Ratzel, F.; Linker, G.

    1980-08-01

    The effect of pulsed electron beam annealing (PEBA) on the lattice location and impurity distribution of Ga ions implanted into Al single crystals has been compared with the thermal annealing behavior of this ion/target system. While with thermal annealing only slight improvement of the lattice site occupation was observed after PEBA within experimental accuracy, all implanted impurities occupied perfect lattice sites. In the thermal treatment the Ga atoms partially diffused out of the implanted region; with PEBA, however, the implanted impurity distribution remained unchanged.

  2. Effect of AlN content on the lattice site location of terbium ions in Al x Ga1-x N compounds

    NASA Astrophysics Data System (ADS)

    Fialho, M.; Rodrigues, J.; Magalhães, S.; Correia, M. R.; Monteiro, T.; Lorenz, K.; Alves, E.

    2016-03-01

    Terbium lattice site location and optical emission in Tb implanted Al x Ga1-x N (0 ≤ x ≤ 1) samples grown by halide vapour phase epitaxy on (0001) sapphire substrates are investigated as a function of AlN content. The samples were implanted with a fluence of 5 × 1014 cm-2 of terbium ions and an energy of 150 keV. Lattice implantation damage is reduced using channelled ion implantation performed along the <0001> axis, normal to the sample surface. Afterwards, thermal annealing treatments at 1400 °C for GaN and 1200 °C for samples with x > 0 were performed to reduce the damage and to activate the optical emission of Tb3+ ions. The study of lattice site location is achieved measuring detailed angular ion channelling scans across the <0001>, < 10\\bar{1}1> and < \\bar{2}113> axial directions. The precise location of the implanted Tb ions is obtained by combining the information of these angular scans with simulations using the Monte Carlo code FLUX. In addition to a Ga/Al substitutional fraction and a random fraction, a fraction of Tb ions occupying a site displaced by 0.2 Å along c-axis from the Ga/Al substitutional site was considered, giving a good agreement between the experimental results and the simulation. Photoluminescence studies proved the optical activation of Tb3+ after thermal annealing and the enhancement of the 5D4 to 7F6 transition intensity with increasing AlN content.

  3. Coso MT Site Locations

    DOE Data Explorer

    Doug Blankenship

    2011-05-04

    This data includes the locations of the MT data collected in and around the Coso Geothermal field that covered the West Flank area. These are the data that the 3D MT models were created from that were discussed in Phase 1 of the West Flank FORGE project. The projected coordinate system is NAD 1927 State Plane California IV FIPS 0404 and the Projection is Lambert Conformal Conic. Units are in feet.

  4. Location of the adsorption transition for lattice polymers

    NASA Astrophysics Data System (ADS)

    Madras, Neal

    2017-02-01

    We consider various lattice models of polymers: lattice trees, lattice animals, and self-avoiding walks. The polymer interacts with a surface (hyperplane), receiving an energy reward of β for each site in the surface. It is known that there is an adsorption transition at a critical value of β. We present a new proof of the result of Hammersley et al (1982 J. Phys. A: Math. Gen. 15 539-71) that the transition occurs at a strictly positive value of β when the surface is impenetrable, i.e. when the polymer is restricted to a half-space. In contrast, for a penetrable surface, it is an open problem to prove that the transition occurs at β =0 . We reduce this problem to proving that the fraction of N-site polymers whose span is less than N/{{log}2}N is not too small.

  5. A new protocol to accurately determine microtubule lattice seam location

    SciTech Connect

    Zhang, Rui; Nogales, Eva

    2015-09-28

    Microtubules (MTs) are cylindrical polymers of αβ-tubulin that display pseudo-helical symmetry due to the presence of a lattice seam of heterologous lateral contacts. The structural similarity between α- and β-tubulin makes it difficult to computationally distinguish them in the noisy cryo-EM images, unless a marker protein for the tubulin dimer, such as kinesin motor domain, is present. We have developed a new data processing protocol that can accurately determine αβ-tubulin register and seam location for MT segments. Our strategy can handle difficult situations, where the marker protein is relatively small or the decoration of marker protein is sparse. Using this new seam-search protocol, combined with movie processing for data from a direct electron detection camera, we were able to determine the cryo-EM structures of MT at 3.5. Å resolution in different functional states. The successful distinction of α- and β-tubulin allowed us to visualize the nucleotide state at the E-site and the configuration of lateral contacts at the seam.

  6. A new protocol to accurately determine microtubule lattice seam location

    DOE PAGES

    Zhang, Rui; Nogales, Eva

    2015-09-28

    Microtubules (MTs) are cylindrical polymers of αβ-tubulin that display pseudo-helical symmetry due to the presence of a lattice seam of heterologous lateral contacts. The structural similarity between α- and β-tubulin makes it difficult to computationally distinguish them in the noisy cryo-EM images, unless a marker protein for the tubulin dimer, such as kinesin motor domain, is present. We have developed a new data processing protocol that can accurately determine αβ-tubulin register and seam location for MT segments. Our strategy can handle difficult situations, where the marker protein is relatively small or the decoration of marker protein is sparse. Using thismore » new seam-search protocol, combined with movie processing for data from a direct electron detection camera, we were able to determine the cryo-EM structures of MT at 3.5. Å resolution in different functional states. The successful distinction of α- and β-tubulin allowed us to visualize the nucleotide state at the E-site and the configuration of lateral contacts at the seam.« less

  7. statement of significance, location map, site plan, landscape plan, site ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    statement of significance, location map, site plan, landscape plan, site sections, evolution of cemetery landscape. - San Francisco National Cemetery, 1 Lincoln Boulevard, San Francisco, San Francisco County, CA

  8. Unity Occupation of Sites in a 3D Optical Lattice

    NASA Astrophysics Data System (ADS)

    Depue, Marshall T.; McCormick, Colin; Winoto, S. Lukman; Oliver, Steven; Weiss, David S.

    1999-03-01

    An average filling factor of one atom per lattice site has been obtained in a submicron scale far-off-resonance optical lattice (FORL). High site occupation is obtained through a compression sequence that includes laser cooling in a 3D FORL and adiabatic toggling between the 3D FORL and a 1D FORL trap. After the highest filling factor is achieved, laser cooling causes collisional loss from lattice sites with more than one atom. Ultimately 44% of the sites have a single atom cooled to near its vibrational ground state. A theoretical model of site occupation based on Poisson statistics agrees well with the experimental results.

  9. Precise lattice location of substitutional and interstitial Mg in AlN

    SciTech Connect

    Amorim, L. M.; Pereira, L. M. C.; Decoster, S.; Temst, K.; Vantomme, A.; Wahl, U.; Correia, J. G.; Silva, D. J.; Silva, M. R. da; Gottberg, A.

    2013-12-23

    The lattice site location of radioactive {sup 27}Mg implanted in AlN was determined by means of emission channeling. The majority of the {sup 27}Mg was found to substitute for Al, yet significant fractions (up to 33%) were also identified close to the octahedral interstitial site. The activation energy for interstitial Mg diffusion is estimated to be between 1.1 eV and 1.7 eV. Substitutional Mg is shown to occupy ideal Al sites within a 0.1 Å experimental uncertainty. We discuss the absence of significant displacements from ideal Al sites, in the context of the current debate, on Mg doped nitride semiconductors.

  10. Lattice location of implanted transition metals in 3C-SiC

    NASA Astrophysics Data System (ADS)

    Costa, A. R. G.; Wahl, U.; Correia, J. G.; Bosne, E.; Amorim, L. M.; Augustyns, V.; Silva, D. J.; da Silva, M. R.; Bharuth-Ram, K.; Pereira, L. M. C.

    2017-06-01

    We have investigated the lattice location of implanted transition metal (TM) 56Mn, 59Fe and 65Ni ions in undoped single-crystalline cubic 3C-SiC by means of the emission channeling technique using radioactive isotopes produced at the CERN-ISOLDE facility. We find that in the room temperature as-implanted state, most Mn, Fe and Ni atoms occupy carbon-coordinated tetrahedral interstitial sites (T C). Smaller TM fractions were also found on Si substitutional (S Si) sites. The TM atoms partially disappear from ideal-T C positions during annealing at temperatures between 500 °C and 700 °C, which is accompanied by an increase in the TM fraction occupying both S Si sites and random sites. An explanation is given according to what is known about the annealing mechanisms of silicon vacancies in silicon carbide. The origin of the observed lattice sites and their changes with thermal annealing are discussed and compared to the case of Si, highlighting the feature that the interstitial migration of TMs in SiC is much slower than in Si.

  11. Lattice location of O18 in ion implanted Fe crystals by Rutherford backscattering spectrometry, channeling and nuclear reaction analysis

    NASA Astrophysics Data System (ADS)

    Vairavel, Mathayan; Sundaravel, Balakrishnan; Panigrahi, Binaykumar

    2016-09-01

    There are contradictory theoretical predictions of lattice location of oxygen interstitial atom at tetrahedral and octahedral interstices in bcc Fe. For validating these predictions, 300 keV O18 ions with fluence of 5 × 1015 ions/cm2 are implanted into bcc Fe single crystals at room temperature and annealed at 400 °C. The Rutherford backscattering spectrometry (RBS) and nuclear reaction analysis (NRA)/channeling measurements are carried out with 850 keV protons. The lattice location of implanted O18 is analysed using the α-particles yield from O18(p,α)N15 nuclear reaction. The tilt angular scans of α-particle yield along <110> and <100> axial directions are performed at room temperature. Lattice location of O18 is found to be at tetrahedral interstitial site by comparing the experimental scan with simulated scans using FLUX7 software.

  12. Location of Sites Within 'Cryptic Terrain'

    NASA Technical Reports Server (NTRS)

    2007-01-01

    A regional landscape near Mars' south pole is called 'cryptic terrain' because it once defied explanation, but new observations bolster and refine interpretations of how springtime outbursts of carbon-dioxide gas there sculpt intricate patterns and paint seasonal splotches. This map indicates locations of three sites that have been examined within the area of cryptic terrain, informally designated 'Manhattan,' 'Giza' and 'Ithaca.'

    The underlying map offers context of brightness measurements from the Thermal Emission Spectrometer instrument draped over a shaded relief map based on data from the Mars Orbiter Laser Altimeter instrument. Cool colors are areas with a low albedo (dark) and warm colors are areas which have high albedo (bright). Both of those instruments flew on NASA's Mars Global Surveyor orbiter.

  13. Lattice location and thermal stability of implanted Fe in ZnO

    SciTech Connect

    Rita, E.; Wahl, U.; Correia, J.G.; Alves, E.; Soares, J.C.

    2004-11-22

    The emission channeling technique was applied to evaluate the lattice location of implanted {sup 59}Fe in single-crystalline ZnO. The angular distribution of {beta}{sup -} particles emitted by {sup 59}Fe was monitored with a position-sensitive electron detector, following 60 keV low dose (2.0x10{sup 13} cm{sup -2}) room-temperature implantation of the precursor isotope {sup 59}Mn. The emission patterns around the [0001], [1102],[1101], and [2113] directions revealed that following annealing at 800 deg. C, 95(8)% of the Fe atoms occupy ideal substitutional Zn sites with rms displacements of 0.06-0.09 A.

  14. Near coincidence site lattice misorientations in monoclinic zirconia

    SciTech Connect

    Gertsman, V.Y. |; Zhilyaev, A.P. |; Szpunar, J.

    1996-12-01

    Zirconium dioxide, ZrO{sub 2}, exists in three crystalline phases: monoclinic, tetragonal, and cubic. Calculations of the coincidence site lattice (CSL) misorientations for the last two lattices and for hexagonal ones using the methods developed represent little difficulty. However, no procedure for the determination of the CSL misorientations in the monoclinic system has been reported so far. Monoclinic zirconia has the crystallographic space group P2{sub 1}/c and the following parameters of the unit cell (e.g., 5, 6): a = 5.1490 {angstrom}, b = 5.2133 {angstrom}, c = 5.3161 {angstrom}, and {beta} = 99.228{degree}. Before discussing possible CSL misorientations in zirconia, consider a simple example based on geometric considerations. In any monoclinic crystal (with any lattice parameters) the two symmetrical boundaries along the (001) and (100) planes must have highly ordered atomic structure. The misorientation of the first boundary is descried as a rotation of either 180{degree} around the [100] direction or 180{degree} around the normal to the (001) plane. The misorientation of the second boundary is 180{degree} [001] or 180{degree} around the normal to the (100) plane. It can be shown that three-dimensional CSLs will exist in both cases if (c/a)cos{beta} is a rational number. This example justifies the following approximation of the unit cell in the monoclinic zirconia: a = b = c and cos{beta} = {minus}1/6 (i.e., {beta} = 99.594{degree}). Consider the following prismatic cell in the monoclinic crystal structure: ([1 0 1], [{bar 1} 0 1], [0 1 0]). With the above approximation, this cell is orthogonal with the ratios of the squares of the edge lengths expressed as 5:7:3. Therefore, one can apply the algorithm for calculations of the CSL misorientations in orthorhombic lattices with rational ratios of squares of the lattice periods, which is based on the general vector-quaternion method of misorientation representation.

  15. Dimer site-bond percolation on a triangular lattice

    NASA Astrophysics Data System (ADS)

    Ramirez, L. S.; De la Cruz Félix, N.; Centres, P. M.; Ramirez-Pastor, A. J.

    2017-02-01

    A generalization of the site-percolation problem, in which pairs of neighbor sites (site dimers) and bonds are independently and randomly occupied on a triangular lattice, has been studied by means of numerical simulations. Motivated by considerations of cluster connectivity, two distinct schemes (denoted as S{\\cap}B and S{\\cup}B ) have been considered. In S{\\cap}B (S{\\cup}B ), two points are said to be connected if a sequence of occupied sites and (or) bonds joins them. Numerical data, supplemented by analysis using finite-size scaling theory, were used to determine (i) the complete phase diagram of the system (phase boundary between the percolating and nonpercolating regions), and (ii) the values of the critical exponents (and universality) characterizing the phase transition occurring in the system.

  16. Inhomogeneous Site Percolation on an Irregular Bethe Lattice with Random Site Distribution

    NASA Astrophysics Data System (ADS)

    Ren, Jingli; Zhang, Liying

    2017-07-01

    In this paper, we study inhomogeneous site percolation on an irregular Bethe lattice, for considering that percolation often occurs on irregular grids or lattices with variable site neighbours in real-world problems. The explicit expression for cluster-size distribution of this percolation is derived based on probability theory. Moreover, the exact formulas for critical occupation probability, mean cluster size, and percolation probability are obtained using generating function method and generalised recursive approach. In addition, sensitivity analysis and numerical simulation are given to deepen and illustrate the results.

  17. Location of John Klein Drill Site

    NASA Image and Video Library

    2013-03-12

    This false-color map shows the area within Gale Crater on Mars, where NASA Curiosity rover landed on Aug. 5, 2012 PDT Aug. 6, 2012 EDT and the location where Curiosity collected its first drilled sample at the John Klein rock.

  18. A systematic approach for locating optimum sites

    Treesearch

    Angel Ramos; Isabel Otero

    1979-01-01

    The basic information collected for landscape planning studies may be given the form of a "s x m" matrix, where s is the number of landscape units and m the number of data gathered for each unit. The problem of finding the optimum location for a given project is translated in the problem of ranking the series of vectors in the matrix which represent landscape...

  19. Lattice location of phosphorus in n-type homoepitaxial diamond films grown by chemical-vapor deposition

    NASA Astrophysics Data System (ADS)

    Hasegawa, Masataka; Teraji, Tokuyuki; Koizumi, Satoshi

    2001-11-01

    The lattice location of phosphorus dopant atoms in n-type homoepitaxial diamond {111} films grown by chemical-vapor deposition has been investigated by Rutherford backscattering spectrometry and particle-induced x-ray emission under ion-channeling conditions. It is found that phosphorus dopant atoms occupy the substitutional sites almost completely in the host diamond lattice. The substitutional fraction of phosphorus was more than 0.9 for <011> and <111> directions. Present observation implies that the deep ground-state energy level of phosphorus in diamond, which is at 0.6 eV below the bottom of the conduction band, is attributed to the relaxation of surrounding carbon atoms.

  20. Interaction in equilibrium plasmas of charged macroparticles located in nodes of cubic lattices

    NASA Astrophysics Data System (ADS)

    Filippov, A. V.

    2016-11-01

    Interaction of two charged pointlike macroparticles located at nodes of simple cubic (sc), body-centered cubic (bcc) and face-centered cubic (fcc) lattices in an equilibrium plasma is studied within the linearized Poisson-Boltzmann model. It is shown that the boundary shape has a strong influence on the electrostatic interaction between two macroparticles, which switches from repulsion at small interparticle distances to attraction as it approaches the halflength of a computational cell. It is found that in a case of dust particles arranged in the nodes of the sc, bcc and fcc lattices, the electrostatic force acting on them is equal to zero and the nature of the interaction changes from repulsion to attraction; hence, the infinite sc, bcc and fcc lattices of charged dust particles are thermodynamically stable at rather low temperatures.

  1. Effect of Single-Site Mutations on HP Lattice Proteins

    SciTech Connect

    Shi, Guangjie; Vogel, Thomas; Wuest, Thomas; Li, Ying Wai; Landau, David P

    2014-01-01

    We developed a heuristic method for determining the ground-state degeneracy of hydrophobic-polar (HP) lattice proteins, based on Wang-Landau and multicanonical sampling. It is applied during comprehensive studies of single-site mutations in specific HP proteins with different sequences. The effects in which we are interested include structural changes in ground-states, changes of ground-state energy, degeneracy, and thermodynamic properties of the system. With respect to mutations, both extremely sensitive and insensitive positions in the HP sequence have been found. That is, ground state energies and degeneracies, as well as other thermodynamic and structural quantities may be either largely unaffected or may change significantly due to mutation.

  2. 23. VIEW OF DOG KENNELS LOCATED AT LAUNCH SITE, LOOKING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    23. VIEW OF DOG KENNELS LOCATED AT LAUNCH SITE, LOOKING NORTH Marilyn Ziemer, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  3. Site survey for optimum location of Optical Communication Experimental Facility

    NASA Technical Reports Server (NTRS)

    1968-01-01

    Site survey was made to determine the optimum location for an Optical Communication Experimental Facility /OCEF/ and to recommend several sites, graded according to preference. A site was desired which could perform two-way laser communication with a spacecraft and laser tracking with a minimum of interruption by weather effects.

  4. Supporting the search for the CEP location with nonlocal PNJL models constrained by lattice QCD

    NASA Astrophysics Data System (ADS)

    Contrera, Gustavo A.; Grunfeld, A. Gabriela; Blaschke, David

    2016-08-01

    We investigate the possible location of the critical endpoint in the QCD phase diagram based on nonlocal covariant PNJL models including a vector interaction channel. The form factors of the covariant interaction are constrained by lattice QCD data for the quark propagator. The comparison of our results for the pressure including the pion contribution and the scaled pressure shift Δ P/ T 4 vs. T/ T c with lattice QCD results shows a better agreement when Lorentzian form factors for the nonlocal interactions and the wave function renormalization are considered. The strength of the vector coupling is used as a free parameter which influences results at finite baryochemical potential. It is used to adjust the slope of the pseudocritical temperature of the chiral phase transition at low baryochemical potential and the scaled pressure shift accessible in lattice QCD simulations. Our study, albeit presently performed at the mean-field level, supports the very existence of a critical point and favors its location within a region that is accessible in experiments at the NICA accelerator complex.

  5. The Structure of the Cubic Coincident Site Lattice Rotation Group

    SciTech Connect

    Reed, B W; Minich, R W; Rudd, R E; Kumar, M

    2004-01-13

    This work is intended to be a mathematical underpinning for the field of grain boundary engineering and its relatives. The interrelationships within the set of rotations producing coincident site lattices in cubic crystals are examined in detail. Besides combining previously established but widely scattered results into a unified context, the present work details newly developed representations of the group structure in terms of strings of generators (based on quaternionic number theory, and including uniqueness proofs and rules for algebraic manipulation) as well as an easily visualized topological network model. Important results that were previously obscure or not universally understood (e.g. the {Sigma} combination rule governing triple junctions) are clarified in these frameworks. The methods also facilitate several general observations, including the very different natures of twin-limited structures in two and three dimensions, the inadequacy of the {Sigma} combination rule to determine valid quadruple nodes, and a curious link between allowable grain boundary assignments and the four-color map theorem. This kind of understanding is essential to the generation of realistic statistical models of grain boundary networks (particularly in twin-dominated systems) and is especially applicable to the field of grain boundary engineering.

  6. Spatial metrology of dopants in silicon with exact lattice site precision.

    PubMed

    Usman, M; Bocquel, J; Salfi, J; Voisin, B; Tankasala, A; Rahman, R; Simmons, M Y; Rogge, S; Hollenberg, L C L

    2016-09-01

    Scaling of Si-based nanoelectronics has reached the regime where device function is affected not only by the presence of individual dopants, but also by their positions in the crystal. Determination of the precise dopant location is an unsolved problem in applications from channel doping in ultrascaled transistors to quantum information processing. Here, we establish a metrology combining low-temperature scanning tunnelling microscopy (STM) imaging and a comprehensive quantum treatment of the dopant-STM system to pinpoint the exact coordinates of the dopant in the Si crystal. The technique is underpinned by the observation that STM images contain atomic-sized features in ordered patterns that are highly sensitive to the STM tip orbital and the absolute dopant lattice site. The demonstrated ability to determine the locations of P and As dopants to 5 nm depths will provide critical information for the design and optimization of nanoscale devices for classical and quantum computing applications.

  7. Spatial metrology of dopants in silicon with exact lattice site precision

    NASA Astrophysics Data System (ADS)

    Usman, M.; Bocquel, J.; Salfi, J.; Voisin, B.; Tankasala, A.; Rahman, R.; Simmons, M. Y.; Rogge, S.; Hollenberg, L. C. L.

    2016-09-01

    Scaling of Si-based nanoelectronics has reached the regime where device function is affected not only by the presence of individual dopants, but also by their positions in the crystal. Determination of the precise dopant location is an unsolved problem in applications from channel doping in ultrascaled transistors to quantum information processing. Here, we establish a metrology combining low-temperature scanning tunnelling microscopy (STM) imaging and a comprehensive quantum treatment of the dopant-STM system to pinpoint the exact coordinates of the dopant in the Si crystal. The technique is underpinned by the observation that STM images contain atomic-sized features in ordered patterns that are highly sensitive to the STM tip orbital and the absolute dopant lattice site. The demonstrated ability to determine the locations of P and As dopants to 5 nm depths will provide critical information for the design and optimization of nanoscale devices for classical and quantum computing applications.

  8. Floor Plan, Axonometric View, Site Location Key, Cesar Chavez Fasting ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Floor Plan, Axonometric View, Site Location Key, Cesar Chavez Fasting Room Diagram - Forty Acres, Tomasa Zapata Mireles Co-op Building , 30168 Garces Highway (Northwest Corner of Garces Highway and Mettler Avenue), Delano, Kern County, CA

  9. Statement of significance, site location graphic, mantle elevation, section through ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Statement of significance, site location graphic, mantle elevation, section through decorative wall element, and terra cotta details - Boston Architectural College, Terra Cotta Mantel, 951 Boylston Street, Boston, Suffolk County, MA

  10. A GIS approach for predicting prehistoric site locations.

    SciTech Connect

    Kuiper, J. A.; Wescott, K. L.

    1999-08-04

    Use of geographic information system (GIS)-based predictive mapping to locate areas of high potential for prehistoric archaeological sites is becoming increasingly popular among archaeologists. Knowledge of the environmental variables influencing activities of original inhabitants is used to produce GIS layers representing the spatial distribution of those variables. The GIS layers are then analyzed to identify locations where combinations of environmental variables match patterns observed at known prehistoric sites. Presented are the results of a study to locate high-potential areas for prehistoric sites in a largely unsurveyed area of 39,000 acres in the Upper Chesapeake Bay region, including details of the analysis process. The project used environmental data from over 500 known sites in other parts of the region and the results corresponded well with known sites in the study area.

  11. Environmental assessment overview, Reference repository location, Hanford site, Washington

    SciTech Connect

    none,

    1986-05-01

    In February 1983, the US Department of Energy (DOE) identified a reference repository location at the Hanford Site in Washington as one of the nine potentially acceptable sites for a mined geologic repository for spent nuclear fuel and high-level radioactive waste. The site is in the Columbia Plateau, which is one of five distinct geohydrologic settings considered for the first repository. To determine their suitability, the Hanford site and the eight other potentially acceptable sites have been evaluated in accordance with the DOE's General Guidelines for the Recommendation of Sites for the Nuclear Waste Repositories. On the basis of the evaluations reported in this EA, the DOE has found that the Hanford site is not disqualified under the guidelines. On the basis of these findings, the DOE is nominating the Hanford site as one of five sites suitable for characterization. 3 figs.

  12. Growth of coincident site lattice matched semiconductor layers and devices on crystalline substrates

    DOEpatents

    Norman, Andrew G; Ptak, Aaron J

    2013-08-13

    Methods of fabricating a semiconductor layer or device and said devices are disclosed. The methods include but are not limited to providing a substrate having a crystalline surface with a known lattice parameter (a). The method further includes growing a crystalline semiconductor layer on the crystalline substrate surface by coincident site lattice matched epitaxy, without any buffer layer between the crystalline semiconductor layer and the crystalline surface of the substrate. The crystalline semiconductor layer will be prepared to have a lattice parameter (a') that is related to the substrate lattice parameter (a). The lattice parameter (a') maybe related to the lattice parameter (a) by a scaling factor derived from a geometric relationship between the respective crystal lattices.

  13. Location Distribution Optimization of Photographing Sites for Indoor Panorama Modeling

    NASA Astrophysics Data System (ADS)

    Zhang, S.; Wu, J.; Zhang, Y.; Zhang, X.; Xin, Z.; Liu, J.

    2017-09-01

    Generally, panoramas image modeling is costly and time-consuming because of photographing continuously to capture enough photos along the routes, especially in complicated indoor environment. Thus, difficulty follows for a wider applications of panoramic image modeling for business. It is indispensable to make a feasible arrangement of panorama sites locations because the locations influence the clarity, coverage and the amount of panoramic images under the condition of certain device. This paper is aim to propose a standard procedure to generate the specific location and total amount of panorama sites in indoor panoramas modeling. Firstly, establish the functional relationship between one panorama site and its objectives. Then, apply the relationship to panorama sites network. We propose the Distance Clarity function (FC and Fe) manifesting the mathematical relationship between panoramas and objectives distance or obstacle distance. The Distance Buffer function (FB) is modified from traditional buffer method to generate the coverage of panorama site. Secondly, transverse every point in possible area to locate possible panorama site, calculate the clarity and coverage synthetically. Finally select as little points as possible to satiate clarity requirement preferentially and then the coverage requirement. In the experiments, detailed parameters of camera lens are given. Still, more experiments parameters need trying out given that relationship between clarity and distance is device dependent. In short, through the function FC, Fe and FB, locations of panorama sites can be generated automatically and accurately.

  14. Site-Resolved Quantum Simulation of Fermion Lattice Problems

    DTIC Science & Technology

    2011-04-01

    magnetism and superfluidity in square lattices. En route to this goal, we have constructed an ultra-high vacuum system, assembled laser cooling...in square lattices. En route to this goal, we have constructed an ultra-high vacuum system, assembled laser cooling systems, tested high-resolution...a dedicated vacuum architecture with sub-millimeter working distances; the use of ultraviolet light to image atom, instead of standard infrared

  15. Kansas City Kansas Community Junior College. Site Location Study.

    ERIC Educational Resources Information Center

    Caudill, Rowlett and Scott, Architects, Houston, TX.

    A summary of the major findings in the study of possible sites for Kansas City Kansas Community Junior College is discussed. The main concerns are with the feasibility and desirability of locating the college on an urban, suburban, or rural site in Wyandotte County. The role and scope of the college are studied to find those elements which give…

  16. A Simple Spreadsheet Program for the Calculation of Lattice-Site Distributions

    ERIC Educational Resources Information Center

    McCaffrey, John G.

    2009-01-01

    A simple spreadsheet program is presented that can be used by undergraduate students to calculate the lattice-site distributions in solids. A major strength of the method is the natural way in which the correct number of ions or atoms are present, or absent, at specific lattice distances. The expanding-cube method utilized is straightforward to…

  17. A Simple Spreadsheet Program for the Calculation of Lattice-Site Distributions

    ERIC Educational Resources Information Center

    McCaffrey, John G.

    2009-01-01

    A simple spreadsheet program is presented that can be used by undergraduate students to calculate the lattice-site distributions in solids. A major strength of the method is the natural way in which the correct number of ions or atoms are present, or absent, at specific lattice distances. The expanding-cube method utilized is straightforward to…

  18. Water treatment plant site location using rough set theory.

    PubMed

    Arabani, M; Pirouz, M

    2015-10-01

    Currently, advanced methods have been developed to select an appropriate site for an engineering project. The ability to make a good decision in site selection can help the engineers to reduce the expensive costs, which are very important in large construction projects. In this paper, a new approach for site selection is presented. This method is based on rough set theory which is a mathematical theory presented by professor Pawlak. In this study, the results of the rough set decision-making are compared with the results of the regression method in a practical case study for the site location of a water treatment plant in Ardabil Province in the northwest of Iran, to demonstrate that the rough set theory provides a useful method for site selection. The results of practical studies indicate that using this method for site selection decision-making can reduce costs and prevent hazards that may happen due to civil engineering uncertainties.

  19. Environmental assessment: Reference repository location, Hanford site, Washington

    SciTech Connect

    none,

    1986-05-01

    In February 1983, the US Department of Energy (DOE) identified a reference repository location at the Hanford Site in Washington as one of the nine potentially acceptable sites for a mined geologic repository for spent nuclear fuel and high-level radioactive waste. The site is in the Columbia Plateau, which is one of five distinct geohydrologic settings considered for the first repository. To determine their suitability, the Hanford site and the eight other potentially acceptable sites have been evaluated in accordance with the DOE's General Guidelines for the Recommendation of Sites for the Nuclear Waste Repositories. These evaluations were reported in draft environmental assessments (EAs), which were issued for public review and comment. After considering the comments received on the draft EAs, the DOE prepared the final EAs. On the basis of the evaluations reported in this EA, the DOE has found that the Hanford site is not disqualified under the guidelines. The DOE has also found that is is suitable for site characterization because the evidence does not support a conclusion that the site will not be able to meet each of the qualifying conditions specified in the guidelines. On the basis of these findings, the DOE is nominating the Hanford site as one of five sites available for characterization.

  20. Environmental assessment: Reference repository location, Hanford site, Washington

    SciTech Connect

    none,

    1986-05-01

    In February 1983, the US Department of Energy (DOE) identified a reference repository location at the Hanford Site in Washington as one of the nine potentially acceptable sites for a mined geologic repository for spent nuclear fuel and high-level radioactive waste. The site is in the Columbia Plateau, which is one of five distinct geohydrologic settings considered for the first repository. To determine their suitability, the Hanford Site and the eight other potentially acceptable sites have been evaluated in accordance with the DOE's General Guidelines for the Recommendation of Sites for the Nuclear Waste Repositories. These evaluations were reported in draft environmental assessments (EAs), which were issued for public review and comment. After considering the comments received on the draft EAs, the DOE prepared the final EAs. On the basis of the evaluations reported in this EA, the DOE has found that the Hanford site is not disqualified under the guidelines. The DOE has also found that it is suitable for site characterization because the evidence does not support a conclusion that the site will not be able to meet each of the qualifying conditions specified in the guidelines. On the basis of these findings, the DOE is nominating the Hanford site as one of five sites suitable for characterization.

  1. 13. "CIVIL, SITE PLAN AND VICINITY MAP, AREA LOCATIONS." Test ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    13. "CIVIL, SITE PLAN AND VICINITY MAP, AREA LOCATIONS." Test Area 1-125. Specifications No. ENG (NASA)-04-35363-1; Drawing No. 60-09-34; sheet 11. Ref. No. C-l. D.O. SERIES 1597/1. Approved for siting on 24 April 1962. - Edwards Air Force Base, Air Force Rocket Propulsion Laboratory, Leuhman Ridge near Highways 58 & 395, Boron, Kern County, CA

  2. Lattice Location of Mg in GaN: A Fresh Look at Doping Limitations

    NASA Astrophysics Data System (ADS)

    Wahl, U.; Amorim, L. M.; Augustyns, V.; Costa, A.; David-Bosne, E.; Lima, T. A. L.; Lippertz, G.; Correia, J. G.; da Silva, M. R.; Kappers, M. J.; Temst, K.; Vantomme, A.; Pereira, L. M. C.

    2017-03-01

    Radioactive 27Mg (t1 /2=9.5 min ) was implanted into GaN of different doping types at CERN's ISOLDE facility and its lattice site determined via β- emission channeling. Following implantations between room temperature and 800 °C , the majority of 27Mg occupies the substitutional Ga sites; however, below 350 °C significant fractions were also found on interstitial positions ˜0.6 Å from ideal octahedral sites. The interstitial fraction of Mg was correlated with the GaN doping character, being highest (up to 31%) in samples doped p type with 2 ×1019 cm-3 stable Mg during epilayer growth, and lowest in Si-doped n -GaN, thus giving direct evidence for the amphoteric character of Mg. Implanting above 350 °C converts interstitial 27Mg to substitutional Ga sites, which allows estimating the activation energy for migration of interstitial Mg as between 1.3 and 2.0 eV.

  3. Coincident-site lattice matching during van der Waals epitaxy

    PubMed Central

    Boschker, Jos E.; Galves, Lauren A.; Flissikowski, Timur; Lopes, Joao Marcelo J.; Riechert, Henning; Calarco, Raffaella

    2015-01-01

    Van der Waals (vdW) epitaxy is an attractive method for the fabrication of vdW heterostructures. Here Sb2Te3 films grown on three different kind of graphene substrates (monolayer epitaxial graphene, quasi freestanding bilayer graphene and the SiC (6√3 × 6√3)R30° buffer layer) are used to study the vdW epitaxy between two 2-dimensionally (2D) bonded materials. It is shown that the Sb2Te3 /graphene interface is stable and that coincidence lattices are formed between the epilayers and substrate that depend on the size of the surface unit cell. This demonstrates that there is a significant, although relatively weak, interfacial interaction between the two materials. Lattice matching is thus relevant for vdW epitaxy with two 2D bonded materials and a fundamental design parameter for vdW heterostructures. PMID:26658715

  4. Predicting site locations for biomass using facilities with Bayesian methods

    Treesearch

    Timothy M. Young; James H. Perdue; Xia Huang

    2017-01-01

    Logistic regression models combined with Bayesian inference were developed to predict locations and quantify factors that influence the siting of biomass-using facilities that use woody biomass in the Southeastern United States. Predictions were developed for two groups of mills, one representing larger capacity mills similar to pulp and paper mills (Group II...

  5. Collagen telopeptides (cross-linking sites) play a role in collagen gel lattice contraction

    NASA Technical Reports Server (NTRS)

    Woodley, D. T.; Yamauchi, M.; Wynn, K. C.; Mechanic, G.; Briggaman, R. A.

    1991-01-01

    Solubilized interstitial collagens will form a fibrillar, gel-like lattice when brought to physiologic conditions. In the presence of human dermal fibroblasts the collagen lattice will contract. The rate of contraction can be determined by computer-assisted planemetry. The mechanisms involved in contraction are as yet unknown. Using this system it was found that the rate of contraction was markedly decreased when collagen lacking telopeptides was substituted for native collagen. Histidinohydroxylysinonorleucine (HHL) is a major stable trifunctional collagen cross-link in mature skin that involves a carboxyl terminal, telopeptide site 16c, the sixteenth amino acid residue from the carboxy terminal of the telopeptide region of alpha 1 (I) in type I collagen. Little, if any, HHL was present in native, purified, reconstituted, soluble collagen fibrils from 1% acetic acid-extracted 2-year-old bovine skin. In contrast, HHL cross-links were present (0.22 moles of cross-link per mole of collagen) in lattices of the same collagen contracted by fibroblasts. However, rat tail tendon does not contain HHL cross-links, and collagen lattices made of rat tail tendon collagen are capable of contraction. This suggests that telopeptide sites, and not mature HHL cross-links per se, are essential for fibroblasts to contract collagen lattices. Beta-aminopropionitrile fumarate (BAPN), a potent lathyrogen that perturbs collagen cross-linking by inhibition of lysyl oxidase, also inhibited the rate of lattice cell contraction in lattices composed of native collagen. However, the concentrations of BAPN that were necessary to inhibit the contraction of collagen lattices also inhibited fibroblast growth suggestive of cellular toxicity. In accordance with other studies, we found no inhibition of the rate of lattice contraction when fibronectin-depleted serum was used. Electron microscopy of contracted gels revealed typical collagen fibers with a characteristic axial periodicity. The data

  6. Collagen telopeptides (cross-linking sites) play a role in collagen gel lattice contraction

    NASA Technical Reports Server (NTRS)

    Woodley, D. T.; Yamauchi, M.; Wynn, K. C.; Mechanic, G.; Briggaman, R. A.

    1991-01-01

    Solubilized interstitial collagens will form a fibrillar, gel-like lattice when brought to physiologic conditions. In the presence of human dermal fibroblasts the collagen lattice will contract. The rate of contraction can be determined by computer-assisted planemetry. The mechanisms involved in contraction are as yet unknown. Using this system it was found that the rate of contraction was markedly decreased when collagen lacking telopeptides was substituted for native collagen. Histidinohydroxylysinonorleucine (HHL) is a major stable trifunctional collagen cross-link in mature skin that involves a carboxyl terminal, telopeptide site 16c, the sixteenth amino acid residue from the carboxy terminal of the telopeptide region of alpha 1 (I) in type I collagen. Little, if any, HHL was present in native, purified, reconstituted, soluble collagen fibrils from 1% acetic acid-extracted 2-year-old bovine skin. In contrast, HHL cross-links were present (0.22 moles of cross-link per mole of collagen) in lattices of the same collagen contracted by fibroblasts. However, rat tail tendon does not contain HHL cross-links, and collagen lattices made of rat tail tendon collagen are capable of contraction. This suggests that telopeptide sites, and not mature HHL cross-links per se, are essential for fibroblasts to contract collagen lattices. Beta-aminopropionitrile fumarate (BAPN), a potent lathyrogen that perturbs collagen cross-linking by inhibition of lysyl oxidase, also inhibited the rate of lattice cell contraction in lattices composed of native collagen. However, the concentrations of BAPN that were necessary to inhibit the contraction of collagen lattices also inhibited fibroblast growth suggestive of cellular toxicity. In accordance with other studies, we found no inhibition of the rate of lattice contraction when fibronectin-depleted serum was used. Electron microscopy of contracted gels revealed typical collagen fibers with a characteristic axial periodicity. The data

  7. Coincident Site Lattice Matched InGaN on (111) Spinel Substrates

    SciTech Connect

    Norman, A. G.; Dippo, P. C.; Moutinho, H. R.; Simon, J.; Ptak, A. J.

    2012-04-09

    Coincident site lattice-matched wurtzite (0001) In{sub 0.31}Ga{sub 0.69}N, emitting in the important green wavelength region, is demonstrated by molecular beam epitaxy on a cubic (111) MgAl{sub 2}O{sub 4} spinel substrate. The coincident site lattice matching condition involves a 30{sup o} rotation between the lattice of the InGaN epitaxial layer and the lattice of the spinel. This work describes an alternative approach towards realizing more compositionally homogenous InGaN films with low dislocation density emitting in the 'green gap' of low efficiency currently observed for semiconductor light emitting diodes (LEDs). This approach could lead to higher efficiency green LEDs presently of great interest for solid-state lighting applications.

  8. Coincident site lattice-matched InGaN on (111) spinel substrates

    SciTech Connect

    Norman, A. G.; Dippo, P. C.; Moutinho, H. R.; Simon, J.; Ptak, A. J.

    2012-04-09

    Coincident site lattice-matched wurtzite (0001) In{sub 0.31}Ga{sub 0.69}N, emitting in the important green wavelength region, is demonstrated by molecular beam epitaxy on a cubic (111) MgAl{sub 2}O{sub 4} spinel substrate. The coincident site lattice matching condition involves a 30 deg. rotation between the lattice of the InGaN epitaxial layer and the lattice of the spinel. This work describes an alternative approach towards realizing more compositionally homogenous InGaN films with low dislocation density emitting in the ''green gap'' of low efficiency currently observed for semiconductor light emitting diodes (LEDs). This approach could lead to higher efficiency green LEDs presently of great interest for solid-state lighting applications.

  9. Tuning magnetic frustration on the diamond lattice of the A-site magnetic spinels CoA12-xGax04: lattice expansion versus site disorder

    SciTech Connect

    Proffen, Thomas E; Melot, Brent C; Page, Katharine; Seshadri, Ramzy; Stoudenmire, E M; Balents, Leon; Bergman, Doron L

    2008-01-01

    The spinels CoB{sub 2}O{sub 4} with magnetic Co{sup 2+} ions on the diamond lattice A site can be frustrated because of competing near-neighbor (J{sub 1}) and next-near neighbor (J{sub 2}) interactions. Here we describe attempts to tune the relative strengths of these interactions by substitution on the non-magnetic B-site. The system we employ is CoAl{sub 2-x}Ga{sub x}O{sub 4}, where Al is systematically replaced by the larger Ga, ostensibly on the B site. As expected, Ga substitution expands the lattice, resulting in Co atoms on the A-site being pushed further from one other and thereby weakening magnetic interactions. In addition, Ga distributes between the B and the A site in a concentration dependent manner displacing an increasing amount of Co from the A site with increasing x. This increased inversion, which is confirmed by neutron diffraction studies carried out at room temperature, affects magnetic ordering very significantly, and changes the nature of the ground state. Modeling of the magnetic coupling illustrates the complexity that arises from the cation site disorder.

  10. Site occupancy and lattice parameters in sigma-phase Co-Cr alloys.

    PubMed

    Cieslak, Jakub; Dubiel, Stanislaw M; Reissner, Michael

    2012-04-01

    Neutron powder diffraction was used to study the distribution of Co and Cr atoms over different lattice sites as well as the lattice parameters of sigma-phase compounds Co(100 - x)Cr(x) with x = 57.0, 62.7 and 65.8. From the diffractograms recorded in the temperature range of 4.2-300 K it was found for the five crystallographically independent sites that A (2a) and D (8i) are predominantly occupied by Co atoms, while sites B (4f), C (8i) and E (8j) mainly accommodate Cr atoms. The lattice parameters a and c exhibit linear temperature dependencies, with different expansion coefficients in the temperature ranges of 4.2-100 and 100-300 K.

  11. Mars Pathfinder First Anniversary Special -- Refined Landing Site Location

    NASA Technical Reports Server (NTRS)

    1998-01-01

    It has been one year since NASA's Return to the Red Planet began with the spectacular landing of Mars Pathfinder and its microrover, Sojourner. The spacecraft bounced onto a flood-washed landscape on July 4, 1997.

    Mars Pathfinder was soon joined by the orbiting Mars Global Surveyor on September 11, 1997 (PDT). Mars Global Surveyor's high resolution camera, MOC, took a picture of the Mars Pathfinder landing site region during its 256th orbit on April 22, 1998. This picture--at about 5 meters (11 feet) per pixel--is the best available for the site. The previous best images were from the Viking 1 Orbiter in 1976, and had resolutions of about 38 meters (125 feet) per pixel.

    The MOC image has allowed scientists to determine the exact location of the Mars Pathfinder lander. Unfortunately, the image resolution is not good enough to actually see the lander--nor can any of the familiar boulders (e.g., 'Yogi') be seen at this resolution.

    Using the MOC image, the landing site location has been refined by Dr. Michael Malin, Principal Investigator for the Mars Global Surveyor MOC Team and a Participating Scientist on the Mars Pathfinder mission. The images above illustrate how the landing site was located by using the 'sight lines' published by T. Parker (Jet Propulsion Laboratory, Pasadena, CA) and topographic map provided by R. Kirk (U.S. Geological Survey, Flagstaff, AZ).

    Left image: MOC image 25603 subframe, shown at 15 meters (about 50 feet) per pixel resolution. Small, colored box is a topographic map of the Mars Pathfinder landing site produced by the U.S. Geological Survey (Flagstaff, AZ) from Mars Pathfinder stereographic images . Dark, heavy lines are 'sight lines' to various landmarks seen along the horizon in Mars Pathfinder camera images, measured by T. Parker and matched to features seen in Viking Orbiter images. These lines were published in Science, v. 278, p. 1746, December 5, 1997. The lighter, thinner sightlines are the same lines, adjusted to

  12. Mars Pathfinder First Anniversary Special -- Refined Landing Site Location

    NASA Technical Reports Server (NTRS)

    1998-01-01

    It has been one year since NASA's Return to the Red Planet began with the spectacular landing of Mars Pathfinder and its microrover, Sojourner. The spacecraft bounced onto a flood-washed landscape on July 4, 1997.

    Mars Pathfinder was soon joined by the orbiting Mars Global Surveyor on September 11, 1997 (PDT). Mars Global Surveyor's high resolution camera, MOC, took a picture of the Mars Pathfinder landing site region during its 256th orbit on April 22, 1998. This picture--at about 5 meters (11 feet) per pixel--is the best available for the site. The previous best images were from the Viking 1 Orbiter in 1976, and had resolutions of about 38 meters (125 feet) per pixel.

    The MOC image has allowed scientists to determine the exact location of the Mars Pathfinder lander. Unfortunately, the image resolution is not good enough to actually see the lander--nor can any of the familiar boulders (e.g., 'Yogi') be seen at this resolution.

    Using the MOC image, the landing site location has been refined by Dr. Michael Malin, Principal Investigator for the Mars Global Surveyor MOC Team and a Participating Scientist on the Mars Pathfinder mission. The images above illustrate how the landing site was located by using the 'sight lines' published by T. Parker (Jet Propulsion Laboratory, Pasadena, CA) and topographic map provided by R. Kirk (U.S. Geological Survey, Flagstaff, AZ).

    Left image: MOC image 25603 subframe, shown at 15 meters (about 50 feet) per pixel resolution. Small, colored box is a topographic map of the Mars Pathfinder landing site produced by the U.S. Geological Survey (Flagstaff, AZ) from Mars Pathfinder stereographic images . Dark, heavy lines are 'sight lines' to various landmarks seen along the horizon in Mars Pathfinder camera images, measured by T. Parker and matched to features seen in Viking Orbiter images. These lines were published in Science, v. 278, p. 1746, December 5, 1997. The lighter, thinner sightlines are the same lines, adjusted to

  13. 14 CFR 420.21 - Launch site location review-launch site boundary.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Launch site location review-launch site boundary. 420.21 Section 420.21 Aeronautics and Space COMMERCIAL SPACE TRANSPORTATION, FEDERAL AVIATION... travels given a worst-case launch vehicle failure in the launch area. An applicant must clearly...

  14. Directed alternating lattices and the site-to-bond ratio for animals and trees

    NASA Astrophysics Data System (ADS)

    Ruskin, H. J.; Cadilhe, A. M. R.; Carvalho, J. A. G. S. M.

    1992-08-01

    We present here a brief summary of results on so-called ``exotic'' directed lattices having nonregular periodicity. Such lattices, e.g., the Archimedean nets, are characterized by different site types and a spread of coordination numbers. The evidence adduced here shows that the exponent structure for the growth of animals and trees on such lattices is of the form predicted, with θ0 for trees equivalent to θ for unrestricted animals, independent of the periodicity property. This supports the general form θc=θ0-c, for cycles c=0. We quote values for the growth parameter (or inverse critical fugacity) λ for bond trees and animal growth on selected directed lattices. The convergence of such series is well known to be subject to the influence of subdominant singularities in addition to θ, and we report on results obtained using the second-log-derivative scheme for the lattices of interest. Recent results from percolation studies for the alternating nets [H. J. Ruskin, Phys. Lett. A 162, 215 (1992)] have proved particularly encouraging for the Archimedean lattices, with z~=2.498+-0.010, but uncertainties for the honeycomb were found to be large. Investigation of the site-to-bond ratios for animals and trees on the honeycomb gives somewhat smoother series behavior, which, though subject to confluence effects, supports a much lower value of the effective coordination number. We quote z~=1.450+-0.050.

  15. Cooling and long-lived single-site localization of an ion in an optical lattice

    NASA Astrophysics Data System (ADS)

    Bylinskii, Alexei; Karpa, Leon; Gangloff, Dorian; Cetina, Marko; Vuletic, Vladan

    2013-05-01

    We report on localization of a continuously cooled single ion by a one-dimensional optical lattice. The ion is confined in a hybrid trap formed by an optical dipole potential produced by the standing-wave field of an optical cavity and a two-dimensional radio-frequency Paul trap transverse to the cavity axis. A lattice-assisted resolved Raman sideband process cools the ion to energies 20 times lower than the depth of the lattice potential, close to the vibrational ground state. We observe ion localization by measuring its displacement in the presence of a periodically driven electric field parallel to the lattice. We demonstrate full suppression of the driven ion motion due to optical localization to a single lattice site on a time-scale of 100 μs, which is 100 times longer than the vibrational period of the ion in the lattice site. At a longer time scale of 1 ms, driven motion is suppressed to 50%. The presented system paves the way to the realization of novel experiments studying classical and quantum friction models, and many-body physics with long-range interactions in periodic potentials. Army Research Office, National Science Foundation, National Science and Engineering Research Council of Canada, Alexander von Humboldt Foundation.

  16. MPL-Net data products available at co-located AERONET sites and field experiment locations

    NASA Astrophysics Data System (ADS)

    Welton, E. J.; Campbell, J. R.; Berkoff, T. A.

    2002-05-01

    Micro-pulse lidar (MPL) systems are small, eye-safe lidars capable of profiling the vertical distribution of aerosol and cloud layers. There are now over 20 MPL systems around the world, and they have been used in numerous field experiments. A new project was started at NASA Goddard Space Flight Center in 2000. The new project, MPL-Net, is a coordinated network of long-time MPL sites. The network also supports a limited number of field experiments each year. Most MPL-Net sites and field locations are co-located with AERONET sunphotometers. At these locations, the AERONET and MPL-Net data are combined together to provide both column and vertically resolved aerosol and cloud measurements. The MPL-Net project coordinates the maintenance and repair for all instruments in the network. In addition, data is archived and processed by the project using common, standardized algorithms that have been developed and utilized over the past 10 years. These procedures ensure that stable, calibrated MPL systems are operating at sites and that the data quality remains high. Rigorous uncertainty calculations are performed on all MPL-Net data products. Automated, real-time level 1.0 data processing algorithms have been developed and are operational. Level 1.0 algorithms are used to process the raw MPL data into the form of range corrected, uncalibrated lidar signals. Automated, real-time level 1.5 algorithms have also been developed and are now operational. Level 1.5 algorithms are used to calibrate the MPL systems, determine cloud and aerosol layer heights, and calculate the optical depth and extinction profile of the aerosol boundary layer. The co-located AERONET sunphotometer provides the aerosol optical depth, which is used as a constraint to solve for the extinction-to-backscatter ratio and the aerosol extinction profile. Browse images and data files are available on the MPL-Net web-site. An overview of the processing algorithms and initial results from selected sites and field

  17. Definition of a quality factor for single site location estimates

    NASA Astrophysics Data System (ADS)

    Coetzee, Petrus J.; du Plessis, Warren P.

    2016-06-01

    A technique to estimate the performance of single site location (SSL) based on high-frequency direction finding for reigning ionospheric propagation conditions is described. This technique is based on classic propagation information (maximum useable frequency, frequency for optimum traffic, optimum working frequency, highest possible frequency, lowest possible frequency, etc.) which can be deduced by ray tracing through an ionospheric model such as the International Reference Ionosphere. The correlation between the elevation angle measured by an interferometric direction finder and the angles corresponding to the propagation conditions is used to assign a quality factor to the calculated SSL ground range result.

  18. Coincident site lattice-matched growth of semiconductors on substrates using compliant buffer layers

    DOEpatents

    Norman, Andrew

    2016-08-23

    A method of producing semiconductor materials and devices that incorporate the semiconductor materials are provided. In particular, a method is provided of producing a semiconductor material, such as a III-V semiconductor, on a silicon substrate using a compliant buffer layer, and devices such as photovoltaic cells that incorporate the semiconductor materials. The compliant buffer material and semiconductor materials may be deposited using coincident site lattice-matching epitaxy, resulting in a close degree of lattice matching between the substrate material and deposited material for a wide variety of material compositions. The coincident site lattice matching epitaxial process, as well as the use of a ductile buffer material, reduce the internal stresses and associated crystal defects within the deposited semiconductor materials fabricated using the disclosed method. As a result, the semiconductor devices provided herein possess enhanced performance characteristics due to a relatively low density of crystal defects.

  19. Exploiting protein flexibility to predict the location of allosteric sites

    PubMed Central

    2012-01-01

    Background Allostery is one of the most powerful and common ways of regulation of protein activity. However, for most allosteric proteins identified to date the mechanistic details of allosteric modulation are not yet well understood. Uncovering common mechanistic patterns underlying allostery would allow not only a better academic understanding of the phenomena, but it would also streamline the design of novel therapeutic solutions. This relatively unexplored therapeutic potential and the putative advantages of allosteric drugs over classical active-site inhibitors fuel the attention allosteric-drug research is receiving at present. A first step to harness the regulatory potential and versatility of allosteric sites, in the context of drug-discovery and design, would be to detect or predict their presence and location. In this article, we describe a simple computational approach, based on the effect allosteric ligands exert on protein flexibility upon binding, to predict the existence and position of allosteric sites on a given protein structure. Results By querying the literature and a recently available database of allosteric sites, we gathered 213 allosteric proteins with structural information that we further filtered into a non-redundant set of 91 proteins. We performed normal-mode analysis and observed significant changes in protein flexibility upon allosteric-ligand binding in 70% of the cases. These results agree with the current view that allosteric mechanisms are in many cases governed by changes in protein dynamics caused by ligand binding. Furthermore, we implemented an approach that achieves 65% positive predictive value in identifying allosteric sites within the set of predicted cavities of a protein (stricter parameters set, 0.22 sensitivity), by combining the current analysis on dynamics with previous results on structural conservation of allosteric sites. We also analyzed four biological examples in detail, revealing that this simple coarse

  20. Apodized structures for the integration of defect sites into photonic lattices

    SciTech Connect

    Boguslawski, Martin Kelberer, Andreas; Rose, Patrick; Denz, Cornelia

    2014-09-15

    We introduce a versatile concept to optically induce photonic structures of local refractive index modulations as well as photonic lattices holding single defect sites. For a given structure, we develop a set of nondiffracting beams obtained by fractionalizing the corresponding spatial spectrum. By combining this set in a multiplexing procedure, we achieve an incoherent combination of all individual structures of the set resulting in a locally addressable refractive index manipulation. We exemplarily present experimental results for apodized, meaning locally confined index changes in a photorefractive crystal resembling a sixfold and a circular symmetric structure. By an additional multiplexing step, we furthermore create periodic photonic lattices featuring embedded defects.

  1. Variations in Metastasis Site by Primary Location in Colon Cancer.

    PubMed

    Amri, Ramzi; Bordeianou, Liliana G; Sylla, Patricia; Berger, David L

    2015-08-01

    The purpose of this paper is to determine whether sites of distant recurrence are associated with specific locations of primary disease in colon cancer. A cohort including all patients (n = 947) undergoing a segmental colonic resection for colon cancer at our center (2004-2011) comparing site-specific metastatic presentation and recurrence rates, as well as their respective multivariable American Joint Committee on Cancer (AJCC) stage-adjusted hazard ratios (mHR). Right-sided colectomies (n = 557) had a lower overall metastasis rate (24.8% vs. 31.8%; P = 0.017; mHR = 1.24 [95% CI: 0.96-1.60]; P = 0.011) due to significantly lower pulmonary metastasis in follow-up (2.7% vs. 9%; P < 0.001; mHR = 0.32 [95% CI: 0.17-0.58]; P = 0.001) and lower overall liver metastasis rate (15.6 vs. 22.1%; P = 0.012; mHR = 0.74 [95% CI: 0.55-0.99];P = 0.050). Left colectomies (n = 127) had higher rates of liver metastasis during follow-up (9.4% vs. 4.8%; P = 0.029; mHR = 1.64 [95% CI: 0.86-3.15]; P = 0.134). Sigmoid resections (n = 238) had higher baseline rates of liver metastasis (17.1% vs. 11.3%; P = 0.015) and higher cumulative rates of lung (12.2% vs. 5.4%; P < 0.001; mHR = 2.26 [95% CI: 1.41-3.63]; P = 0.001) and brain metastases (2.3% vs. 0.6%; P = 0.033; mHR = 4.03 [95% CI: 1.14-14.3]; P = 0.031). Other sites of metastasis, including the (retro) peritoneum, omentum, ovary, and bone, did not yield significant differences. Important variations in site-specific rates of metastatic disease exist within major resection regions of colon cancer. These variations may be important to consider when evaluating options for adjuvant treatment and surveillance after resection of the primary disease.

  2. Channelling experiments on the lattice location of hydrogen in metals using the nuclear reaction 1H(11B, α)αα

    NASA Astrophysics Data System (ADS)

    Yagi, Eiichi

    1992-03-01

    In order to locate hydrogen dissolved in metals a nuclear reaction 1H(11B, α)αα was applied to a channelling method. As an example of this application the results of the following two experiments were briefly reported. (1) The lattice location of H in V was investigated under a <001> compressive stress of 7 kg/mm2 below the elastic limit. The configuration of hydrogen is extremely sensitive to compressive stress and changes from a tetrahedral (T) site to a diplaced-T or 4T configuration. On release of this stress the hydrogen atoms returned to T-sites. (2) To elucidate the mechanism of the enhancement of the terminal solubility for hydrogen (TSH) in Nb on alloying with undersized Mo atoms, the state of hydrogen was studied in Nb-based Nb-Mo dilute alloys. It was demonstrated that H atoms are trapped by Mo atoms and located at sites displaced from T-sites by about 0.6 Å. This result supports the trapping model for the enhancement of the TSH in the region of low Mo concentration.

  3. Site dependent hardening of the lanthanum metal lattice by hydrogen absorption

    NASA Astrophysics Data System (ADS)

    Machida, A.; Watanuki, T.; Ohmura, A.; Ikeda, T.; Aoki, K.; Nakano, S.; Takemura, K.

    2011-03-01

    The compressibility of lanthanum (La) metal and its hydrides were measured at room temperature by high pressure synchrotron X-ray diffraction. La metal pressurized in a hydrogen medium forms a hydride with an fcc metal lattice, which likely contains hydrogen at a concentration close to 3.0 and persists over the measured pressure span up to 21 GPa. Equations of state have been determined by helium compression experiments for LaH 2 with tetrahedral interstitial sites fully occupied with hydrogen atoms and for LaH 2.46 with octahedral interstitial sites partially occupied with hydrogen atoms and tetrahedral sites fully occupied. Both hydrides possess fcc metal lattices. The bulk modulus values B0 are 66.7 ± 1.2 GPa for LaH 2 and 68.4±1.0 GPa for LaH 2.46. These values are three times larger than that of La metal and are very close to each other despite the difference in hydrogen occupation states. The hardening of the metal lattice by hydrogenation is attributed predominantly to hydrogen-metal interactions at the tetrahedral sites and is most pronounced for La, which has the largest ionic radius among rare-earth metals.

  4. 43 CFR 3832.10 - Procedures for locating mining claims or sites.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Procedures for locating mining claims or sites. 3832.10 Section 3832.10 Public Lands: Interior Regulations Relating to Public Lands (Continued... OR SITES Locating Mining Claims or Sites § 3832.10 Procedures for locating mining claims or sites....

  5. Muscarinic acetylcholine receptors: location of the ligand binding site

    SciTech Connect

    Hulme, E.; Wheatley, M.; Curtis, C.; Birdsall, N.

    1987-05-01

    The key to understanding the pharmacological specificity of muscarinic acetylcholine receptors (mAChR's) is the location within the receptor sequence of the amino acid residues responsible for ligand binding. To approach this problem, they have purified mAChR's from rat brain to homogeneity by sequential ion-exchange chromatography, affinity chromatography and molecular weight fractionation. Following labelling of the binding site with an alkylating affinity label, /sup 3/H-propylbenzilycholine mustard aziridinium ion (/sup 3/H-PrBCM), the mAChR was digested with a lysine-specific endoproteinase, and a ladder of peptides of increasing molecular weight, each containing the glycosylated N-terminus, isolated by chromatography on wheat-germ agglutinin sepharose. The pattern of labelling showed that a residue in the peptides containing transmembrane helices 2 and/or 3 of the mAChR was alkylated. The linkage was cleaved by 1 M hydroxylamine, showing that /sup 3/H-PrBCM was attached to an acidic residue, whose properties strongly suggested it to be embedded in a hydrophobic intramembrane region of the mAChR. Examination of the cloned sequence of the mAChR reveals several candidate residues, the most likely of which is homologous to an aspartic acid residue thought to protonate the retinal Schiff's base in the congeneric protein rhodopsin.

  6. One program, multiple training sites: does site of family medicine training influence professional practice location?

    PubMed

    Jamieson, Jean L; Kernahan, Jill; Calam, Betty; Sivertz, Kristin S

    2013-01-01

    Numerous strategies have been suggested to increase recruitment of family physicians to rural communities and smaller regional centers. One approach has been to implement distributed postgraduate education programs where trainees spend substantial time in such communities. The purpose of the current study was to compare the eventual practice location of family physicians who undertook their postgraduate training through a single university but who were based in either metropolitan or distributed, non-metropolitan communities. Since 1998, the Department of Family Practice at the University of British Columbia in Canada has conducted an annual survey of its residents at 2, 5, and 10 years after completion of training. The authors received Ethics Board approval to use this anonymized data to identify personal and educational factors that predict future practice location. The overall response rate was 45%. At 2 years (N=222), residents trained in distributed sites were 15 times more likely to enter practice in rural communities, small towns and regional centers than those who trained in metropolitan teaching centers. This was even more predictive for retention in non-urban practice sites. Among the subgroup of physicians who remained in a single practice location for more than a year preceding the survey, those who trained in smaller sites were 36 times more likely to choose a rural or regional practice setting. While the vast majority of those trained in metropolitan sites chose an urban practice location, a subgroup of those with some rural upbringing were more likely to practice in rural or regional settings. Trainees from distributed sites considered themselves more prepared for practice regardless of ultimate practice location. Participation in a distributed postgraduate family medicine training site is an important predictor of a non-urban practice location. This effect persists for 10 years after completion of training and is independent of other predictors of

  7. GIS modeling of archaeological site locations: A low-tech approach

    NASA Technical Reports Server (NTRS)

    Futato, Eugene M.

    1991-01-01

    A Geographic Information System (GIS)-type analysis of archaeological site locations using a dBase III plus program and a desk top computer is presented. A previously developed model of site locations in the Sequatchie Valley of northeastern Alabama is tested against known site locations in another large survey area there. The model fails to account for site locations in the test area. A model is developed for the test area and indicates the site locations are indeed different. Whether this is due to differences in site locations on a sub-regional level, or to sample error in the original model is unknown.

  8. GIS modeling of archaeological site locations: A low-tech approach

    NASA Technical Reports Server (NTRS)

    Futato, Eugene M.

    1991-01-01

    A Geographic Information System (GIS)-type analysis of archaeological site locations using a dBase III plus program and a desk top computer is presented. A previously developed model of site locations in the Sequatchie Valley of northeastern Alabama is tested against known site locations in another large survey area there. The model fails to account for site locations in the test area. A model is developed for the test area and indicates the site locations are indeed different. Whether this is due to differences in site locations on a sub-regional level, or to sample error in the original model is unknown.

  9. Nonlinear instabilities of multi-site breathers in Klein-Gordon lattices

    SciTech Connect

    Cuevas-Maraver, Jesus; Kevrekidis, Panayotis G.; Pelinovsky, Dmitry E.

    2016-08-01

    Here, we explore the possibility of multi-site breather states in a nonlinear Klein–Gordon lattice to become nonlinearly unstable, even if they are found to be spectrally stable. The mechanism for this nonlinear instability is through the resonance with the wave continuum of a multiple of an internal mode eigenfrequency in the linearization of excited breather states. For the nonlinear instability, the internal mode must have its Krein signature opposite to that of the wave continuum. This mechanism is not only theoretically proposed, but also numerically corroborated through two concrete examples of the Klein–Gordon lattice with a soft (Morse) and a hard (Φ4) potential. Compared to the case of the nonlinear Schrödinger lattice, the Krein signature of the internal mode relative to that of the wave continuum may change depending on the period of the multi-site breather state. For the periods for which the Krein signatures of the internal mode and the wave continuum coincide, multi-site breather states are observed to be nonlinearly stable.

  10. Nonlinear instabilities of multi-site breathers in Klein-Gordon lattices

    DOE PAGES

    Cuevas-Maraver, Jesus; Kevrekidis, Panayotis G.; Pelinovsky, Dmitry E.

    2016-08-01

    Here, we explore the possibility of multi-site breather states in a nonlinear Klein–Gordon lattice to become nonlinearly unstable, even if they are found to be spectrally stable. The mechanism for this nonlinear instability is through the resonance with the wave continuum of a multiple of an internal mode eigenfrequency in the linearization of excited breather states. For the nonlinear instability, the internal mode must have its Krein signature opposite to that of the wave continuum. This mechanism is not only theoretically proposed, but also numerically corroborated through two concrete examples of the Klein–Gordon lattice with a soft (Morse) and amore » hard (Φ4) potential. Compared to the case of the nonlinear Schrödinger lattice, the Krein signature of the internal mode relative to that of the wave continuum may change depending on the period of the multi-site breather state. For the periods for which the Krein signatures of the internal mode and the wave continuum coincide, multi-site breather states are observed to be nonlinearly stable.« less

  11. Nonlinear instabilities of multi-site breathers in Klein-Gordon lattices

    SciTech Connect

    Cuevas-Maraver, Jesus; Kevrekidis, Panayotis G.; Pelinovsky, Dmitry E.

    2016-08-01

    Here, we explore the possibility of multi-site breather states in a nonlinear Klein–Gordon lattice to become nonlinearly unstable, even if they are found to be spectrally stable. The mechanism for this nonlinear instability is through the resonance with the wave continuum of a multiple of an internal mode eigenfrequency in the linearization of excited breather states. For the nonlinear instability, the internal mode must have its Krein signature opposite to that of the wave continuum. This mechanism is not only theoretically proposed, but also numerically corroborated through two concrete examples of the Klein–Gordon lattice with a soft (Morse) and a hard (Φ4) potential. Compared to the case of the nonlinear Schrödinger lattice, the Krein signature of the internal mode relative to that of the wave continuum may change depending on the period of the multi-site breather state. For the periods for which the Krein signatures of the internal mode and the wave continuum coincide, multi-site breather states are observed to be nonlinearly stable.

  12. Robust site-resolvable quantum gates in an optical lattice via inhomogeneous control.

    PubMed

    Lee, J H; Montano, E; Deutsch, I H; Jessen, P S

    2013-01-01

    The power of optical lattices for quantum simulation and computation is greatly enhanced when atoms at individual lattice sites can be accessed for measurement and control. Experiments routinely use high-resolution microscopy to obtain site-resolved images in real time, and site-resolved spin flips have been implemented using microwaves resonant with frequency-shifted target atoms in focused light fields. Here we show that methods adapted from inhomogeneous control can greatly increase the performance of such resonance addressing, allowing the targeting of arbitrary single-qubit quantum gates on selected sites with minimal cross-talk to neighbouring sites and significant robustness against uncertainty in the atom position. We further demonstrate the simultaneous implementation of different gates at adjacent sites with a single global microwave pulse. Coherence is verified through two-pulse experiments, and the average gate fidelity is measured to be 95±3%. Our approach may be useful in other contexts such as ion traps and nitrogen-vacancy centres in diamond.

  13. 43 CFR 3832.1 - What does it mean to locate mining claims or sites?

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false What does it mean to locate mining claims or sites? 3832.1 Section 3832.1 Public Lands: Interior Regulations Relating to Public Lands... CLAIMS OR SITES Locating Mining Claims or Sites § 3832.1 What does it mean to locate mining claims or...

  14. 43 CFR 3832.11 - How do I locate mining claims or sites?

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... claim or site. The notice must include: (i) The name or names of the locators; (ii) The date of the location; and (iii) A description of the claim or site; (iv) The name or number of the claim or site, or... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false How do I locate mining claims or...

  15. 43 CFR 3832.11 - How do I locate mining claims or sites?

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... claim or site. The notice must include: (i) The name or names of the locators; (ii) The date of the location; and (iii) A description of the claim or site; (iv) The name or number of the claim or site, or... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false How do I locate mining claims or...

  16. 43 CFR 3832.11 - How do I locate mining claims or sites?

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... claim or site. The notice must include: (i) The name or names of the locators; (ii) The date of the location; and (iii) A description of the claim or site; (iv) The name or number of the claim or site, or... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false How do I locate mining claims or...

  17. 43 CFR 3832.1 - What does it mean to locate mining claims or sites?

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false What does it mean to locate mining claims or sites? 3832.1 Section 3832.1 Public Lands: Interior Regulations Relating to Public Lands... CLAIMS OR SITES Locating Mining Claims or Sites § 3832.1 What does it mean to locate mining claims...

  18. 43 CFR 3832.1 - What does it mean to locate mining claims or sites?

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false What does it mean to locate mining claims or sites? 3832.1 Section 3832.1 Public Lands: Interior Regulations Relating to Public Lands... CLAIMS OR SITES Locating Mining Claims or Sites § 3832.1 What does it mean to locate mining claims...

  19. 43 CFR 3832.1 - What does it mean to locate mining claims or sites?

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false What does it mean to locate mining claims or sites? 3832.1 Section 3832.1 Public Lands: Interior Regulations Relating to Public Lands... CLAIMS OR SITES Locating Mining Claims or Sites § 3832.1 What does it mean to locate mining claims...

  20. Featureless and nonfractionalized Mott insulators on the honeycomb lattice at 1/2 site filling

    PubMed Central

    Kimchi, Itamar; Parameswaran, S. A.; Turner, Ari M.; Wang, Fa; Vishwanath, Ashvin

    2013-01-01

    Within the Landau paradigm, phases of matter are distinguished by spontaneous symmetry breaking. Implicit here is the assumption that a completely symmetric state exists: a paramagnet. At zero temperature such quantum featureless insulators may be forbidden, triggering either conventional order or topological order with fractionalized excitations. Such is the case for interacting particles when the particle number per unit cell, f, is not an integer. However, can lattice symmetries forbid featureless insulators even at integer f? An especially relevant case is the honeycomb (graphene) lattice—where free spinless fermions at (the two sites per unit cell mean is half-filling per site) are always metallic. Here we present wave functions for bosons, and a related spin-singlet wave function for spinful electrons, on the honeycomb lattice and demonstrate via quantum to classical mappings that they do form featureless Mott insulators. The construction generalizes to symmorphic lattices at integer f in any dimension. Our results explicitly demonstrate that in this case, despite the absence of a noninteracting insulator at the same filling, lack of order at zero temperature does not imply fractionalization.

  1. Universality class of site and bond percolation on multifractal scale-free planar stochastic lattice

    NASA Astrophysics Data System (ADS)

    Hassan, M. K.; Rahman, M. M.

    2016-10-01

    In this article, we investigate both site and bond percolation on a weighted planar stochastic lattice (WPSL), which is a multifractal and whose dual is a scale-free network. The characteristic property of percolation is that it exhibits threshold phenomena as we find sudden or abrupt jump in spanning probability across pc accompanied by the divergence of some other observable quantities, which is reminiscent of a continuous phase transition. Indeed, percolation is characterized by the critical behavior of percolation strength P (p ) ˜(pc-p ) β , mean cluster size S ˜(pc-p ) -γ , and the system size L ˜(pc-p ) -ν , which are known as the equivalent counterpart of the order parameter, susceptibility, and correlation length, respectively. Moreover, the cluster size distribution function ns(pc) ˜s-τ and the mass-length relation M ˜Ldf of the spanning cluster also provide useful characterization of the percolation process. We numerically obtain a value for pc and for all the exponents such as β ,ν ,γ ,τ , and df. We find that, except for pc, all the exponents are exactly the same in both bond and site percolation despite the significant difference in the definition of cluster and other quantities. Our results suggest that the percolation on WPSL belongs to a new universality class, as its exponents do not share the same value as for all the existing planar lattices. Besides, like all other cases, its site and bond type belong to the same universality class.

  2. A GIS typology to locate sites of submarine groundwater discharge.

    PubMed

    Rapaglia, John; Grant, Carley; Bokuniewicz, Henry; Pick, Tsvi; Scholten, Jan

    2015-07-01

    Although many researchers agree on the importance of submarine groundwater discharge (SGD), it remains difficult to locate and quantify this process. A groundwater typology was developed based on local digital elevation models and compared to concurrent radon mapping indicative of SGD in the Niantic River, CT USA. Areas of high radon activity were located near areas of high flow accumulation lending evidence to the utility of this approach to locate SGD. The benefits of this approach are three-fold: fresh terrestrial SGD may be quickly located through widely-available digital elevation models at little or no cost to the investigator; fresh SGD may also be quantified through the GIS approach by multiplying pixelated flow accumulation with the expected annual recharge; and, as these data necessarily quantify only fresh SGD, a comparison of these data with SGD as calculated by Rn activity may allow for the separation of the fresh and circulated fractions of SGD. This exercise was completed for the Niantic River where SGD as calculated by the GIS model is 1.2 m(3)/s, SGD as calculated by Rn activity is 0.73-5.5 m(3)/s, and SGD as calculated via a theoretical approach is 1.8-4.3 m(3)/s. Therefore fresh, terrestrial SGD accounts for 22-100% of total SGD in the Niantic River.

  3. 43 CFR 3832.11 - How do I locate mining claims or sites?

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... within the boundaries of the claim. (c) To locate a claim or site, you must— (1) Make certain that the land on which you are locating the claim or site is Federal land that is open to mineral entry (2... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false How do I locate mining claims or...

  4. 14 CFR 420.30 - Launch site location review for permitted launch vehicles.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Launch site location review for permitted... AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE Criteria and Information Requirements for Obtaining a License § 420.30 Launch site location review...

  5. 14 CFR 420.29 - Launch site location review for unproven launch vehicles.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Launch site location review for unproven... AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE Criteria and Information Requirements for Obtaining a License § 420.29 Launch site location review for...

  6. 14 CFR 420.27 - Launch site location review-information requirements.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Launch site location review-information... ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE Criteria and Information Requirements for Obtaining a License § 420.27 Launch site location review—information requirements....

  7. 14 CFR 420.25 - Launch site location review-risk analysis.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Launch site location review-risk analysis... ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE Criteria and Information Requirements for Obtaining a License § 420.25 Launch site location review—risk analysis. (a) If a...

  8. 14 CFR 420.25 - Launch site location review-risk analysis.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Launch site location review-risk analysis... ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE Criteria and Information Requirements for Obtaining a License § 420.25 Launch site location review—risk analysis. (a) If a...

  9. Locating Air Force Base Sites History’s Legacy

    DTIC Science & Technology

    2004-01-01

    Pierre Newly built sub-base Watertown Newly built sub-base Tennessee Dyersburg Field, Halls Transferred from other AAF use Texas Dalhart Newly...Sam Houston, Texas , where the weather was warmer and more favorable for winter flying. Foulois and his crew of mechanics arrived with the airplane in...airplanes, and equipment in Augusta to move to Texas City, Texas . Meantime, the Signal Corps tried to purchase the College Park site, but Congress failed to

  10. Monte Carlo study of the Ising ferromagnet on the site-diluted triangular lattice

    NASA Astrophysics Data System (ADS)

    Najafi, M. N.

    2016-01-01

    In this paper we consider the Ising model on the triangular percolation lattice and analyze its geometrical interfaces and spin clusters. The (site) percolation lattice is tuned by the occupancy parameter p which is the probability that a site is magnetic. Some statistical observables are studied in terms of temperature (T) and p. We find two separate (second order) transition lines, namely magnetic and percolation transition lines. The finite size analysis shows that the magnetic transition line is a critical one with varying exponents, having its root in the fact that the line is composed of individual critical points, or that a cross-over occurs between two (UV and IR) fixed points. For the percolation transition line however the exponents seem to be identical. Schramm-Loewner evolution (SLE) is employed to address the problem of conformal invariance at the points on the magnetic transition line. We find that at p ≃ 0.9 the model is described by κ ≃ 4 whose corresponding central charge is maximum with respect to the others.

  11. Locations of Roberge-Weiss transition endpoints in lattice QCD with Nf=2 improved Kogut-Susskind quarks

    NASA Astrophysics Data System (ADS)

    Wu, Liang-Kai; Meng, Xiang-Fei

    2017-03-01

    Result on locations of the tricritical points of Nf=2 lattice QCD with imaginary chemical potential is presented. Simulations are carried out with Symanzik improved gauge action and Asqtad fermion action. With imaginary chemical potential i μI=i π T , previous studies show that the Roberge-Weiss (RW) transition endpoints are triple points at both large and small quark masses, and second order transition points at intermediate quark masses. The triple and second order endpoints are separated by two tricritical ones. Our simulations are carried out at 7 values of quark mass a m ranging from 0.024 to 0.070 on lattice volume 1 23×4 , 1 63×4 , 2 03×4 . The susceptibility and Binder cumulant of the imaginary part of the Polyakov loop are employed to determine the nature of RW transition endpoints. The simulations suggest that the two tricritical points are within the range 0.024-0.026 and 0.040-0.050, respectively.

  12. Twinning in fcc lattice creates low-coordinated catalytically active sites in porous gold.

    PubMed

    Krajčí, Marian; Kameoka, Satoshi; Tsai, An-Pang

    2016-08-28

    We describe a new mechanism for creation of catalytically active sites in porous gold. Samples of porous gold prepared by de-alloying Al2Au exhibit a clear correlation between the catalytic reactivity towards CO oxidation and structural defects in the fcc lattice of Au. We have found that on the stepped {211} surfaces quite common twin boundary defects in the bulk structure of porous gold can form long close-packed rows of atoms with the coordination number CN = 6. DFT calculations confirm that on these low-coordinated Au sites dioxygen chemisorbs and CO oxidation can proceed via the Langmuir-Hinshelwood mechanism with the activation energy of 37 kJ/mol or via the CO-OO intermediate with the energy barrier of 19 kJ/mol. The existence of the twins in porous gold is stabilized by the surface energy.

  13. Effect of forward looking sites on a multi-phase lattice hydrodynamic model

    NASA Astrophysics Data System (ADS)

    Redhu, Poonam; Gupta, Arvind Kumar

    2016-03-01

    A new multi-phase lattice hydrodynamic traffic flow model is proposed by considering the effect of multi-forward looking sites on a unidirectional highway. We examined the qualitative properties of proposed model through linear as well as nonlinear stability analysis. It is shown that the multi-anticipation effect can significantly enlarge the stability region on the phase diagram and exhibit three-phase traffic flow. It is also observed that the multi-forward looking sites have prominent influence on traffic flow when driver senses the relative flux of leading vehicles. Theoretical findings are verified using numerical simulation which confirms that the traffic jam is suppressed efficiently by considering the information of leading vehicles in unidirectional multi-phase traffic flow.

  14. Twinning in fcc lattice creates low-coordinated catalytically active sites in porous gold

    NASA Astrophysics Data System (ADS)

    Krajčí, Marian; Kameoka, Satoshi; Tsai, An-Pang

    2016-08-01

    We describe a new mechanism for creation of catalytically active sites in porous gold. Samples of porous gold prepared by de-alloying Al2Au exhibit a clear correlation between the catalytic reactivity towards CO oxidation and structural defects in the fcc lattice of Au. We have found that on the stepped {211} surfaces quite common twin boundary defects in the bulk structure of porous gold can form long close-packed rows of atoms with the coordination number CN = 6. DFT calculations confirm that on these low-coordinated Au sites dioxygen chemisorbs and CO oxidation can proceed via the Langmuir-Hinshelwood mechanism with the activation energy of 37 kJ/mol or via the CO-OO intermediate with the energy barrier of 19 kJ/mol. The existence of the twins in porous gold is stabilized by the surface energy.

  15. 43 CFR 3832.42 - How do I locate a tunnel site?

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false How do I locate a tunnel site? 3832.42 Section 3832.42 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) LOCATING MINING CLAIMS OR SITES Tunnel Sites § 3832.42 How do I locate a tunnel...

  16. 43 CFR 3832.42 - How do I locate a tunnel site?

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false How do I locate a tunnel site? 3832.42 Section 3832.42 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) LOCATING MINING CLAIMS OR SITES Tunnel Sites § 3832.42 How do I locate a tunnel...

  17. 43 CFR 3832.42 - How do I locate a tunnel site?

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false How do I locate a tunnel site? 3832.42 Section 3832.42 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) LOCATING MINING CLAIMS OR SITES Tunnel Sites § 3832.42 How do I locate a tunnel...

  18. 43 CFR 3832.42 - How do I locate a tunnel site?

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false How do I locate a tunnel site? 3832.42 Section 3832.42 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) LOCATING MINING CLAIMS OR SITES Tunnel Sites § 3832.42 How do I locate a tunnel...

  19. Location of platinum binding sites on bacteriorhodopsin by electron diffraction

    SciTech Connect

    Dumont, M.E.; Wiggins, J.W.; Hayward, S.B.

    1981-05-01

    A platinum-containing derivative of bacteriorhodopsin has been prepared by treating purple membranes with glycyl-L-methionatoplatinum. Low-dose electron diffraction was used to identify Pt binding sites in the 5.6 A resolution reconstruction of the bacteriorhodopsin unit cell in projection. This is a necessary first step in the use of the Pt derivative for identifying the parts of the amino acid sequence corresponding to the ..cap alpha.. helices in the bacteriorhodopsin structure and for obtaining phases for reflections out to 3.5 A resolution by the method of heavy-atom isomorphous replacement. The largest peak in a Fourier difference map between platinum-labeled and native purple membrane is larger than thespurious features expected to arise from errors in measurements of diffraction intensities.

  20. Ground State and Collective Modes of Magnetic Dipoles Fixed on Two-Dimensional Lattice Sites

    NASA Astrophysics Data System (ADS)

    Feldmann, John; Kalman, Gabor; Hartmann, Peter; Rosenberg, Marlene

    2006-10-01

    In complex (dusty) plasmas the grains may be endowed with intrinsic dipole moments. We present here our results of theoretical calculations accompanied by and Molecular Dynamics simulation findings on the ground state configuration and on the collective modes mode spectrum of a system of magnetic dipoles, interacting via the magnetic dipole pair-dipole potential, fixed on two-dimensional (2D) lattice sites. In particular, we We study a family of lattices that can be characterized by two parameters: (parallelogram)---the aspect ratio, c/a, and the rhombic angle, phi. The The new collective modes of in the system associated with the dipole-dipole interaction are the angular oscillations (or wobbling) of the direction of the dipoles about their equilibrium configurations. We identify in-plane and out-of-plane modes and display their dispersions. Orders of magnitudes of the parameters of the system relevant to possible future experiments will be discussed. JD Feldmann, G J Kalman and M Rosenberg, J. Phys. A: Math. Gen. 39 (2006) 4549-4553

  1. Geometric frustration on a 1/9th site depleted triangular lattice

    NASA Astrophysics Data System (ADS)

    Hopkinson, John; Beck, Jarrett

    2013-03-01

    In the searches both for new spin liquid and spin ice (artificial and macroscopic) candidates, geometrically frustrated two-dimensional spin systems have played a prominent role. Here we present a study of the classical antiferromagnetic Ising (AFI) model on the sorrel net, a 1/9th site depleted and 1/7th bond depleted triangular lattice. The AFI model on this corner-shared triangle net is found to have a large residual entropy per spin S/N = 0 . 48185 +/- 0 . 00008 , indicating the sorrel net is highly geometrically frustrated. Anticipating that it may be difficult to achieve perfect bond depletion, we investigate the physics resulting from turning back on the depleted bonds (J2). We present the phase diagram, analytic expressions for the long range partially ordered ground state spin structure for antiferromagnetic J2 and the short range ordered ground state spin structure for ferromagnetic J2, the magnetic susceptibility and the static structure factor. We briefly comment on the possibility that artificial spin ice on the sorrel lattice could by made, and on a recent report [T. D. Keene et al., Dalton Trans. 40 2983 (2011)] of the creation of a 1/9th depleted cobalt hydroxide oxalate. This work was supported by NSERC (JMH) and NSERC USRA (JJB)

  2. 25 CFR 214.28 - Location of sites for mines and buildings.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 25 Indians 1 2010-04-01 2010-04-01 false Location of sites for mines and buildings. 214.28 Section... and buildings. In event of disagreement between two or more mineral lessees regarding sites for the location of wells, mines, buildings, plants, etc., the same shall be determined by the superintendent...

  3. 25 CFR 214.28 - Location of sites for mines and buildings.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 25 Indians 1 2011-04-01 2011-04-01 false Location of sites for mines and buildings. 214.28 Section... and buildings. In event of disagreement between two or more mineral lessees regarding sites for the location of wells, mines, buildings, plants, etc., the same shall be determined by the superintendent...

  4. 25 CFR 214.28 - Location of sites for mines and buildings.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 25 Indians 1 2013-04-01 2013-04-01 false Location of sites for mines and buildings. 214.28 Section... and buildings. In event of disagreement between two or more mineral lessees regarding sites for the location of wells, mines, buildings, plants, etc., the same shall be determined by the superintendent after...

  5. 25 CFR 214.28 - Location of sites for mines and buildings.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 25 Indians 1 2012-04-01 2011-04-01 true Location of sites for mines and buildings. 214.28 Section... and buildings. In event of disagreement between two or more mineral lessees regarding sites for the location of wells, mines, buildings, plants, etc., the same shall be determined by the superintendent after...

  6. Dislocation generation at near-coincidence site lattice grain boundaries during silicon directional solidification

    NASA Astrophysics Data System (ADS)

    Autruffe, Antoine; Stenhjem Hagen, Vegard; Arnberg, Lars; Di Sabatino, Marisa

    2015-02-01

    Bi-crystal silicon ingots separated by near-coincident site lattice (near-CSL) grain boundaries (GBs), namely Σ9 and Σ27a, have been grown in a small scale Bridgman-type furnace at 3 μm/s. Surface observations show different microstructure developments, depending on the nature of the seed GB and initial deviation from the low energy configuration. Grain boundary structure evolution and dislocation emission sources have been assessed for both types of GBs. Topological imperfections forming at the near - Σ9 and Σ27 GBs during the growth have been found to be the major source of defect generation. These imperfections are the result of the re-arrangement of the GBs during the growth due to the seed GBs deviation from low energy configurations - i.e. Σ9{221}1/{221}2 and Σ27a{511}1/{511}2.

  7. Coincident site lattice bi-crystals growth-Impurity segregation towards grain boundaries

    NASA Astrophysics Data System (ADS)

    Autruffe, Antoine; Vines, Lasse; Arnberg, Lars; Di Sabatino, Marisa

    2015-04-01

    Bi-crystal silicon ingots with coincident site lattice (CSL) grain boundaries (GB), namely Σ3, Σ9, Σ27a, have been grown in a small scale Bridgman type furnace at 3 μm/s. Melts have been intentionally polluted with 25 ppma of copper and indium. Segregation of these impurities towards the central grain boundaries has been assessed by secondary ion mass spectrometry (SIMS). Influence of topological imperfections and grain boundary nature has been investigated. While copper segregation towards Σ3 GB has not been detected, copper has been found to diffuse towards Σ9 and Σ27a GB, especially at steps and GB junctions. Indium segregation has not been detected at any GB. This indicates that slow-diffusing element segregation towards GB depends on the boundary nature, and/or the grains orientation.

  8. How Inhomogeneous Site Percolation Works on Bethe Lattices: Theory and Application.

    PubMed

    Ren, Jingli; Zhang, Liying; Siegmund, Stefan

    2016-03-01

    Inhomogeneous percolation, for its closer relationship with real-life, can be more useful and reasonable than homogeneous percolation to illustrate the critical phenomena and dynamical behaviour of complex networks. However, due to its intricacy, the theoretical framework of inhomogeneous percolation is far from being complete and many challenging problems are still open. In this paper, we first investigate inhomogeneous site percolation on Bethe Lattices with two occupation probabilities, and then extend the result to percolation with m occupation probabilities. The critical behaviour of this inhomogeneous percolation is shown clearly by formulating the percolation probability P∞(p) with given occupation probability p, the critical occupation probability pc = sup{p|P∞(p) = o}, and the average cluster size χ(p) where p is subject to P∞(p) = o. Moreover, using the above theory, we discuss in detail the diffusion behaviour of an infectious disease (SARS) and present specific disease-control strategies in consideration of groups with different infection probabilities.

  9. Bak-Tang-Wiesenfeld model on the square site-percolation lattice

    NASA Astrophysics Data System (ADS)

    Najafi, M. N.

    2016-08-01

    The Bak-Tang-Wiesenfeld (BTW) model is considered on the site-diluted square lattice, tuned by the occupancy probability p. Various statistical observables of the avalanches are analyzed in terms of p, e.g. the fractal dimension of their exterior frontiers, gyration radius, loop lengths and Green’s function. The model exhibits critical behavior for all amounts of p, and the exponents of the statistical observables are analyzed. We find a distinct universality class at p={p}c, which is unstable towards a p = 1 (BTW) fixed point. This universality class displays some common features such as a two-dimensional (2D) Ising universality class, e.g. the fractal dimension of loops in the thermodynamic limit is {D}Fp={pc}=1.38\\mp 0.01 which is compatible with the fractal dimension of geometrical spin clusters of the 2D critical Ising model (with {D}F{{Ising}}=\\tfrac{11}{8}).

  10. Effect of single-site mutations on hydrophobic-polar lattice proteins.

    PubMed

    Shi, Guangjie; Vogel, Thomas; Wüst, Thomas; Li, Ying Wai; Landau, David P

    2014-09-01

    We developed a heuristic method for determining the ground-state degeneracy of hydrophobic-polar (HP) lattice proteins, based on Wang-Landau and multicanonical sampling. It is applied during comprehensive studies of single-site mutations in specific HP proteins with different sequences. The effects in which we are interested include structural changes in ground states, changes of ground-state energy, degeneracy, and thermodynamic properties of the system. With respect to mutations, both extremely sensitive and insensitive positions in the HP sequence have been found. That is, ground-state energies and degeneracies, as well as other thermodynamic and structural quantities, may be either largely unaffected or may change significantly due to mutation.

  11. Effect of single-site mutations on hydrophobic-polar lattice proteins

    NASA Astrophysics Data System (ADS)

    Shi, Guangjie; Vogel, Thomas; Wüst, Thomas; Li, Ying Wai; Landau, David P.

    2014-09-01

    We developed a heuristic method for determining the ground-state degeneracy of hydrophobic-polar (HP) lattice proteins, based on Wang-Landau and multicanonical sampling. It is applied during comprehensive studies of single-site mutations in specific HP proteins with different sequences. The effects in which we are interested include structural changes in ground states, changes of ground-state energy, degeneracy, and thermodynamic properties of the system. With respect to mutations, both extremely sensitive and insensitive positions in the HP sequence have been found. That is, ground-state energies and degeneracies, as well as other thermodynamic and structural quantities, may be either largely unaffected or may change significantly due to mutation.

  12. How Inhomogeneous Site Percolation Works on Bethe Lattices: Theory and Application

    NASA Astrophysics Data System (ADS)

    Ren, Jingli; Zhang, Liying; Siegmund, Stefan

    2016-03-01

    Inhomogeneous percolation, for its closer relationship with real-life, can be more useful and reasonable than homogeneous percolation to illustrate the critical phenomena and dynamical behaviour of complex networks. However, due to its intricacy, the theoretical framework of inhomogeneous percolation is far from being complete and many challenging problems are still open. In this paper, we first investigate inhomogeneous site percolation on Bethe Lattices with two occupation probabilities, and then extend the result to percolation with m occupation probabilities. The critical behaviour of this inhomogeneous percolation is shown clearly by formulating the percolation probability with given occupation probability p, the critical occupation probability , and the average cluster size where p is subject to . Moreover, using the above theory, we discuss in detail the diffusion behaviour of an infectious disease (SARS) and present specific disease-control strategies in consideration of groups with different infection probabilities.

  13. Feasibility study for locating archaeological village sites by satellite remote sensing techniques

    NASA Technical Reports Server (NTRS)

    Cook, J. P. (Principal Investigator)

    1972-01-01

    The author has identified the following significant results. As a result of ground truth activities, the accurate geographic location of an old fish camp was established as 64 deg 12 min 38 sec N, 158 deg 30 min 42 sec W. Previously the location of this very large abandoned village site was given only on a map sketched in 1935. This location and two other nearby sites will be used as ERTS training areas.

  14. Quantum phase transition of a Bose gas in a lattice with a controlled number of atoms per site

    NASA Astrophysics Data System (ADS)

    Du, Xu

    2005-05-01

    We have studied the superfluid-Mott insulator quantum phase transition [1] of a gas of ^87Rb atoms in an optical lattice. We are able to prepare the gas with a controllable number of one, two, or three atoms per lattice site, as verified with photoassociation spectroscopy. We measure momentum distributions using standard time-of-flight imaging techniques. These are similar to those of ref. [1], and exhibit narrow peaks at moderate lattice strengths. We find that the width of these peaks increases for lattice heights greater than about 13 times the recoil energy [2], and we observe interesting differences in this behavior, depending on the number of atoms per site. The data suggest that the quantum phase transition occurs at higher lattice strength with larger site occupation. We acknowledge the support of this work by the R. A. Welch Foundation, The N. S. F., and the D.O.E. Quantum Optics Initiative. [1] Markus Greiner et al., Nature 415, 39 (2002). [2] Thilo St"oferle et al., Phys. Rev. Lett. 92, 130403 (2004).

  15. Investigation on the Ancient Site Location in the Mesopotamian Region Based on ALOS Data

    NASA Astrophysics Data System (ADS)

    Matsumoto, Ken; Hasegawa, Hitoshi; Ushiki, Hisao; Goto, Tomoya

    2008-11-01

    This project aims to investigate the location of ancient Mesopotamian sites in Iraq and to create a distribution map using ALOS data. Iraq is a centre of the ancient Mesopotamian civilization. A distribution map is essential to conduct a prompt investigation and preservation of ancient sites and cultural heritage in Iraq which are at risk of looting and robbery due to the recent Iraqi condition. Firstly this project enables to create Satellite Image Map of Iraq, where the acquisition of detailed map is not possible, based on ALOS Data. The ancient site of Mesopotamia is called "Tell" which is swelled up from the alluvial plain and forms like a hill with the bare land on the surface. Secondly, the estimation of locating ancient site has been undertaken by using the Satellite Image Interpretation method. Finally the locations of the ancient sites and the Satellite Image map are layered to produce the Distribution Map.

  16. 15 CFR 970.405 - Appropriate exploration site size and location.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... REGULATIONS OF THE ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR EXPLORATION LICENSES Certification of Applications § 970.405 Appropriate exploration site size and location. Before the Administrator may certify an application, he must approve the size and location of the exploration area selected...

  17. 15 CFR 970.405 - Appropriate exploration site size and location.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... REGULATIONS OF THE ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR EXPLORATION LICENSES Certification of Applications § 970.405 Appropriate exploration site size and location. Before the Administrator may certify an application, he must approve the size and location of the exploration area selected...

  18. 15 CFR 970.405 - Appropriate exploration site size and location.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... REGULATIONS OF THE ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR EXPLORATION LICENSES Certification of Applications § 970.405 Appropriate exploration site size and location. Before the Administrator may certify an application, he must approve the size and location of the exploration area selected...

  19. 15 CFR 970.405 - Appropriate exploration site size and location.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... REGULATIONS OF THE ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR EXPLORATION LICENSES Certification of Applications § 970.405 Appropriate exploration site size and location. Before the Administrator may certify an application, he must approve the size and location of the exploration area selected...

  20. 15 CFR 970.405 - Appropriate exploration site size and location.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... REGULATIONS OF THE ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR EXPLORATION LICENSES Certification of Applications § 970.405 Appropriate exploration site size and location. Before the Administrator may certify an application, he must approve the size and location of the exploration area selected...

  1. Application of the maximal covering location problem to habitat reserve site selection: a review

    Treesearch

    Stephanie A. Snyder; Robert G. Haight

    2016-01-01

    The Maximal Covering Location Problem (MCLP) is a classic model from the location science literature which has found wide application. One important application is to a fundamental problem in conservation biology, the Maximum Covering Species Problem (MCSP), which identifies land parcels to protect to maximize the number of species represented in the selected sites. We...

  2. 25 CFR 214.28 - Location of sites for mines and buildings.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 25 Indians 1 2014-04-01 2014-04-01 false Location of sites for mines and buildings. 214.28 Section 214.28 Indians BUREAU OF INDIAN AFFAIRS, DEPARTMENT OF THE INTERIOR ENERGY AND MINERALS LEASING OF... location of wells, mines, buildings, plants, etc., the same shall be determined by the superintendent...

  3. Charge states and lattice sites of dilute implanted Sn in ZnO

    NASA Astrophysics Data System (ADS)

    Mølholt, T. E.; Gunnlaugsson, H. P.; Johnston, K.; Mantovan, R.; Röder, J.; Adoons, V.; Mokhles Gerami, A.; Masenda, H.; Matveyev, Y. A.; Ncube, M.; Unzueta, I.; Bharuth-Ram, K.; Gislason, H. P.; Krastev, P.; Langouche, G.; Naidoo, D.; Ólafsson, S.; Zenkevich, A.; ISOLDE Collaboration

    2017-04-01

    The common charge states of Sn are 2+  and 4+. While charge neutrality considerations favour 2+  to be the natural charge state of Sn in ZnO, there are several reports suggesting the 4+  state instead. In order to investigate the charge states, lattice sites, and the effect of the ion implantation process of dilute Sn atoms in ZnO, we have performed 119Sn emission Mössbauer spectroscopy on ZnO single crystal samples following ion implantation of radioactive 119In (T ½  =  2.4 min) at temperatures between 96 K and 762 K. Complementary perturbed angular correlation measurements on 111mCd implanted ZnO were also conducted. Our results show that the 2+  state is the natural charge state for Sn in defect free ZnO and that the 4+  charge state is stabilized by acceptor defects created in the implantation process.

  4. Validation of Innovative Exploration Technologies for Newberry Volcano: Drill Site Location Map 2010

    DOE Data Explorer

    Jaffe, Todd

    2012-01-01

    Newberry seeks to explore "blind" (no surface evidence) convective hydrothermal systems associated with a young silicic pluton on the flanks of Newberry Volcano. This project will employ a combination of innovative and conventional techniques to identify the location of subsurface geothermal fluids associated with the hot pluton. Newberry project drill site location map 2010. Once the exploration mythology is validated, it can be applied throughout the Cascade Range and elsewhere to locate and develop “blind” geothermal resources.

  5. 76 FR 64943 - Proposed Cercla Administrative Cost Recovery Settlement; ACM Smelter and Refinery Site, Located...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-19

    ... AGENCY Proposed Cercla Administrative Cost Recovery Settlement; ACM Smelter and Refinery Site, Located in... administrative settlement for recovery of past and projected future response costs concerning the ACM Smelter and...-5027. Comments should reference the ACM Smelter and Refinery NPL Site, the EPA Docket No....

  6. Library Facility Siting and Location Handbook. The Greenwood Library Management Collection.

    ERIC Educational Resources Information Center

    Koontz, Christine M.

    This handbook is a guide to the complex process of library facility siting and location. It includes relevant research and professionals' siting experiences, as well as actual case studies of closures, openings, mergers, and relocations of library facilities. While the bulk of the volume provides practical information, the work also presents an…

  7. Nuclear event time histories and computed site transfer functions for locations in the Los Angeles region

    USGS Publications Warehouse

    Rogers, A.M.; Covington, P.A.; Park, R.B.; Borcherdt, R.D.; Perkins, D.M.

    1980-01-01

    This report presents a collection of Nevada Test Site (NTS) nuclear explosion recordings obtained at sites in the greater Los Angeles, Calif., region. The report includes ground velocity time histories, as well as, derived site transfer functions. These data have been collected as part of a study to evaluate the validity of using low-level ground motions to predict the frequency-dependent response of a site during an earthquake. For this study 19 nuclear events were recorded at 98 separate locations. Some of these sites have recorded more than one of the nuclear explosions, and, consequently, there are a total of 159, three-component station records. The location of all the recording sites are shown in figures 1–5, the station coordinates and abbreviations are given in table 1. The station addresses are listed in table 2, and the nuclear explosions that were recorded are listed in table 3. The recording sites were chosen on the basis of three criteria: (1) that the underlying geological conditions were representative of conditions over significant areas of the region, (2) that the site was the location of a strong-motion recording of the 1971 San Fernando earthquake, or (3) that more complete geographical coverage was required in that location.

  8. 43 CFR 3832.33 - How do I locate a mill site?

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... mill site to be valid. (b) If the United States does not own the surface estate of a particular parcel... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false How do I locate a mill site? 3832.33 Section 3832.33 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF...

  9. 14 CFR 420.30 - Launch site location review for permitted launch vehicles.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Launch site location review for permitted launch vehicles. 420.30 Section 420.30 Aeronautics and Space COMMERCIAL SPACE TRANSPORTATION, FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE...

  10. 14 CFR 420.29 - Launch site location review for unproven launch vehicles.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Launch site location review for unproven launch vehicles. 420.29 Section 420.29 Aeronautics and Space COMMERCIAL SPACE TRANSPORTATION, FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION LICENSING LICENSE TO OPERATE A LAUNCH SITE...

  11. Isolation of Cu Atoms in Pd Lattice: Forming Highly Selective Sites for Photocatalytic Conversion of CO2 to CH4.

    PubMed

    Long, Ran; Li, Yu; Liu, Yan; Chen, Shuangming; Zheng, Xusheng; Gao, Chao; He, Chaohua; Chen, Nanshan; Qi, Zeming; Song, Li; Jiang, Jun; Zhu, Junfa; Xiong, Yujie

    2017-03-29

    Photocatalytic conversion of CO2 to CH4, a carbon-neutral fuel, represents an appealing approach to remedy the current energy and environmental crisis; however, it suffers from the large production of CO and H2 by side reactions. The design of catalytic sites for CO2 adsorption and activation holds the key to address this grand challenge. In this Article, we develop highly selective sites for photocatalytic conversion of CO2 to CH4 by isolating Cu atoms in Pd lattice. According to our synchrotron-radiation characterizations and theoretical simulations, the isolation of Cu atoms in Pd lattice can play dual roles in the enhancement of CO2-to-CH4 conversion: (1) providing the paired Cu-Pd sites for the enhanced CO2 adsorption and the suppressed H2 evolution; and (2) elevating the d-band center of Cu sites for the improved CO2 activation. As a result, the Pd7Cu1-TiO2 photocatalyst achieves the high selectivity of 96% for CH4 production with a rate of 19.6 μmol gcat(-1) h(-1). This work provides fresh insights into the catalytic site design for selective photocatalytic CO2 conversion, and highlights the importance of catalyst lattice engineering at atomic precision to catalytic performance.

  12. Stratigraphic Profiles for Selected Hanford Site Seismometer Stations and Other Locations

    SciTech Connect

    Last, George V.

    2014-02-01

    Stratigraphic profiles were constructed for eight selected Hanford Site seismometer stations, five Hanford Site facility reference locations, and seven regional three-component broadband seismometer stations. These profiles provide interpretations of the subsurface layers to support estimation of ground motions from past earthquakes, and the prediction of ground motions from future earthquakes. In most cases these profiles terminated at the top of the Wanapum Basalt, but at selected sites profiles were extended down to the top of the crystalline basement. The composite one-dimensional stratigraphic profiles were based primarily on previous interpretations from nearby boreholes, and in many cases the nearest deep borehole is located kilometers away.

  13. Selection of river crossing location and sleeping site by proboscis monkeys (Nasalis larvatus) in Sabah, Malaysia.

    PubMed

    Matsuda, Ikki; Tuuga, Augustine; Akiyama, Yoshihiro; Higashi, Seigo

    2008-11-01

    From May 2005-2006, selections of river crossing locations and sleeping sites used by a one-male group (BE-Group) of proboscis monkeys (Nasalis larvatus) were investigated along the Menanggul River, tributary of the Kinabatangan River, Sabah, Malaysia. The frequency of river crossings for focal monkeys in the BE-Group was significantly higher at locations with narrow branch-to-bank distances. Branch-to-bank distances were defined as the distances between the longest tree branches extending over the river and the bank of river on each side. This was measured in areas crossed by the monkeys. The focal monkeys used locations with a higher probability of successful river crossings that did not require jumping into the water and swimming across than those that did. The frequency of sleeping site usage by the BE-Group was positively correlated with the frequency of using river crossing locations by the focal monkeys. Previous reports on predation of proboscis monkeys indicate that clouded leopards (Neofelis diardi) and crocodilians (Tomistoma schlegeli and Crocodylus porosus) may be the major terrestrial and aquatic predators of these monkeys. The selection of river crossing locations by proboscis monkeys may be influenced both by the threat of these predators and the location of suitable and protected sleeping sites. Finally, sleeping sites locations that offer arboreal escape routes may protect proboscis monkeys from leopard attack. Copyright 2008 Wiley-Liss, Inc.

  14. Activities of the IERS Working Group on Site Survey and Co-location

    NASA Astrophysics Data System (ADS)

    Bergstrand, Sten; Schmid, Ralf

    2016-12-01

    The objective of the International Earth Rotation and Reference Systems Service (IERS) Working Group on Site Survey and Co-location is to improve local measurements at space geodesy sites. We appointed dedicated Points of Contact (POC) with the four different services of IERS as well as the NASA Space Geodesy Project in order to improve the efficiency of internal communication within the working group. Following the REFAG2014 conference, the POCs agreed on a common and general terminology on local ties that clarifies the communication regarding site surveying and co-location issues between and within the IERS services. We give brief introductions to the different observation techniques and mention some contemporary issues related to site surveying and co-location.

  15. Early prediction of eruption site using lightning location data: Estimates of accuracy during past eruptions

    NASA Astrophysics Data System (ADS)

    Nína Petersen, Guðrún; Arason, Þórður; Bjornsson, Halldór

    2013-04-01

    Eruption of subglacial volcanoes may lead to catastrophic floods and therefore early determination of the exact eruption site may be critical to civil protection evacuation plans. Poor visibility due to weather or darkness often inhibit positive identification of exact eruption location for many hours. However, because of the proximity and abundance of water in powerful subglacial volcanic eruptions, they are probably always accompanied by early lightning activity in the volcanic column. Lightning location systems, designed for weather thunderstorm monitoring, based on remote detection of electromagnetic waves from lightning, can provide valuable real-time information on location of eruption site. Important aspect of such remote detection is its independence of weather, apart from thunderstorms close to the volcano. Individual lightning strikes can be 5-10 km in length and are sometimes tilted and to the side of the volcanic column. This adds to the lightning location uncertainty, which is often a few km. Furthermore, the volcanic column may be swayed by the local wind to one side. Therefore, location of a single lightning can be misleading but by calculating average location of many lightning strikes and applying wind correction a more accurate eruption site location can be obtained. In an effort to assess the expected accuracy, the average lightning locations during the past five volcanic eruptions in Iceland (1998-2011) were compared to the exact site of the eruption vent. Simultaneous weather thunderstorms might have complicated this analysis, but there were no signs of ordinary thunderstorms in Iceland during these eruptions. To identify a suitable wind correction, the vector wind at the 500 hPa pressure level (5-6 km altitude) was compared to mean lightning locations during the eruptions. The essential elements of a system, which predicts the eruption site during the first hour(s) of an eruption, will be described.

  16. Charge-patterning phase transition on a surface lattice of titratable sites adjacent to an electrolyte solution

    NASA Astrophysics Data System (ADS)

    Shore, Joel; Thurston, George

    We discuss a model for a charge-patterning phase transition on a two-dimensional square lattice of titratable sites, here regarded as protonation sites, placed on a square lattice in a dielectric medium just below the planar interface between this medium and an aqueous salt solution. Within Debye-Huckel theory, the analytical form of the electrostatic repulsion between protonated sites exhibits an approximate inverse cubic power-law decrease beyond short distances. The problem can thus be mapped onto the two-dimensional antiferromagnetic Ising model with this longer-range interaction, which we study with Monte Carlo simulations. As we increase pH, the occupation probability of a site decreases from 1 at low pH to 0 at high pH. For sufficiently-strong interaction strengths, a phase transition occurs as the occupation probability of 1/2 is approached: the charges arrange themselves into a checkerboard pattern. This ordered phase persists over a range of pH until a transition occurs back to a disordered state. This state is the analogue of the Neel state in the antiferromagnetic Ising spin model. More complicated ordered phases are expected for sufficiently strong interactions (with occupation probabilities of 1/4 and 3/4) and if the lattice is triangular rather than square. This work was supported by NIH EY018249 (GMT).

  17. Male mate location behaviour and encounter sites in a community of tropical butterflies: taxonomic and site associations and distinctions.

    PubMed

    Tiple, Ashish D; Padwad, Sonali V; Dapporto, Leonardo; Dennis, Roger L H

    2010-12-01

    Male mate location behaviour and encounter sites have been studied in 72 butterfly species at Nagpur, India, and related to taxonomy, morphology, habitat and population parameters. Species can be placed in three broad classes of mate location behaviour: invariant patrolling, invariant perching, and perch-patrol, the latter associated with increasing site fidelity, territorial defence and male assemblages. Significant taxonomic differences occur, closely related species tending to share mate location behaviours. Morphological differences are found with heavier and larger butterflies displaying greater site fidelity and territorial defence, and differences occur between individuals of species which both perch and patrol. Invariant patrolling is particularly associated with tracks through vegetation, host planttrack distributions, and high female to male numbers observed on transects; invariant perching is linked more to edge features than patrolling, and to lower population counts on transects. Species which perch-patrol, defend territories and establish male assemblages are associated with more complex vegetation structures, and have encounter sites at vegetation edges, landforms and predictable resource (host plant) concentrations. Attention is drawn to the importance of distinctive mate encounter sites for the conservation of butterfly species' habitats.

  18. On the CSL grain boundary distributions in polycrystals. [Coincidence site lattice

    SciTech Connect

    Pan, Yu . Dept. of Mechanical Engineering); Adams, B.L. . Dept. of Manufacturing Engineering)

    1994-04-15

    CSL (Coincidence Site Lattice) grain boundaries are considered to be special for polycrystals. Compared to non-special, random grain boundaries, they are believed to be low-energy, and they are observed to be resistant to intergranular fracture, creep cavitation, etc. Thus the frequencies of CSL distribution are important in Grain Boundary Characteristics Design (GBCD). In a previous paper, the influence of crystallographic texture on the frequencies of CSL grain boundary distributions in polycrystals was discussed. The authors draw the conclusion that the frequency of CSL-boundaries depends upon texture, but that this frequency is weak for textures which are not sharp. However, the potential for spatial correlations between neighboring grain orientations was not considered in this earlier work, and some recent experimental measurements in real polycrystals are in contradiction with this conclusion. Recent experimental advances make it possible to determine the crystallographic characteristics of a large number of grain boundaries in a short time. This paper illustrates two examples for fcc cubic materials: Inconel 600 alloy with a weak rolling texture, and a highly fiber-textured aluminum thin film. It is demonstrated that the occurrence of CSL boundaries is very strong in the weakly textured Inconel 600 alloy, in disagreement with theoretical estimates. For the aluminum thin film, it is shown that experimental measurements and theoretical predictions are in reasonable agreement. In the next section the numerical results of theoretical and computer simulated CSL grain boundary distributions are described. Section 3 details the OIM experimental measurements. Section 4 provides a more complete discussion of the comparison between theoretical predictions and experimental measurements.

  19. Site preferences and lattice vibrations of Nd6Fe13 - x TxSi (T = Co, Ni)

    NASA Astrophysics Data System (ADS)

    Huang, Tian-Shun; Cheng, Hai-Xia; Wang, Xiao-Xu; Zhang, Zhen-Feng; An, Zhi-Wei; Zhang, Guo-Hua

    2015-10-01

    The site preferences of the rare earth intermetallics Nd6Fe13-xTxSi (T = Co, Ni) are investigated by using interatomic pair potentials which are converted from a lattice-inversion method. Calculation shows that the order of the site preference of Co is 4d, 16k, 16l1, and 16l2 and that of Ni is 16l2, 16l1, 16k, and 4d in Nd6Fe13-xTxSi. Calculated lattice and positional parameters are found to agree with those reported in the literature. Furthermore, the phonon density of states for Nd6Fe13-xTxSi is also evaluated, and a qualitative analysis featuring the coordination and the relevant potentials is carried out. Project supported by the National Natural Science Foundation of China (Grant Nos. 11272048 and 50971024) and the National Key Basic Research Program of China (Grant No. 2011CB606401).

  20. Finding erotic oases: locating the sites of men's same-sex anonymous sexual encounters.

    PubMed

    Tewksbury, Richard

    2008-01-01

    Because anonymous sexual relations between two men are widely considered deviant many men seeking such activities look to erotic oases-natural environments appropriated for covert, often furtive sexual purposes. Previous research on erotic oases has focused on characteristics of involved men and processes of locating, negotiating with, and consummating sexual relations with others. This study draws on one major Web site listing of "cruising places" in the United States to identify common locations for erotic oases. Results show that the most common locations identified as erotic oases by users are public parks, adult bookstores, health clubs, and college campuses. Locations most likely to be listed as believed to be under law enforcement surveillance are outdoor, high traffic locations. Based on these results existing research has only begun to examine the most common locations for this highly stigmatized, deviant behavior and subculture.

  1. Probing of the location of the allosteric site on m1 muscarinic receptors by site-directed mutagenesis.

    PubMed

    Matsui, H; Lazareno, S; Birdsall, N J

    1995-01-01

    In an attempt to locate the allosteric site on muscarinic receptors to which gallamine binds, 21 residues in the putative external loops and loop/transmembrane helix interfaces have been mutated to alanine. These residues are conserved in mammalian m1-m5 receptors. All mutant receptors can be expressed in COS-7 cells at high levels and appear to be functional, in that acetylcholine binding is sensitive to GTP. The gallamine binding site does not appear to involve the first, second, and most of the third extracellular loops. Tryptophan-400 and -101 inhibit gallamine binding when mutated to alanine or to phenylalanine and may form part of the allosteric site. Several mutations also affect antagonist binding. Surprisingly, tryptophan-91, a residue conserved in monoamine and peptide receptors, is important for antagonist binding. This residue, present in the middle of the first extracellular loop, may have a structural role in many G protein-coupled receptors. Antagonist binding is also affected by mutations of tryptophan-101 and tyrosine-404 to alanine or phenylalanine. In a helical wheel model, trytophan-101 and tyrosine-404, in conjunction with serine-78, aspartate-105, and tyrosine-408, form a cluster of residues that have been reported to affect antagonist binding when mutated, and they may therefore be part of the antagonist binding site. It is suggested that the allosteric site may be located close to and just extracellular to the antagonist binding site. The binding of methoctramine, an antagonist with allosteric properties, is not substantially affected by mutations at tryptophan-91, -101, and -400 and tyrosine-404, and thus these amino acids are not important for its binding. The binding of himbacine, another antagonist with allosteric properties, is affected by these mutations but in a manner different from that of gallamine or competitive antagonists. It has not been possible to determine whether methoctramine and himbacine bind exclusively to the

  2. New understanding of the role of coincidence site lattice boundaries in abnormal grain growth of aluminium alloy

    NASA Astrophysics Data System (ADS)

    Park, Chang-Soo; Park, Hyung-Ki; Shim, Hyung-Seok; Na, Tae-Wook; Han, Chan-Hee; Hwang, Nong-Moon

    2015-04-01

    The sequential microstructure evolution of abnormal grain growth (AGG) in the aluminium alloy (AA5052) was investigated to analyse the migration behaviour of coincidence site lattice (CSL) boundaries, which are known to play an important role in inducing AGG. The sequential evolution showed that CSL boundaries tend to disappear more slowly than general boundaries at the growth front of abnormally growing grains. Especially, the migration rate of Σ9 boundaries was noticeably low, which is contrary to the previous suggestions.

  3. Locational Probabilities for Archeological Sites in the Eastern Rapides-South Central Avoyelles Region, Central Louisiana.

    DTIC Science & Technology

    1981-10-01

    AD-A12 724 LOCATIONAL PROBAB IITES FOR ARCHEOLOGICAL SITES IN THE / EASTERN RAPIDES-S-.(U) ARCHAEOLOGY INC LAFAYETTE LA G IBSONl OCT 81 RR-3 DA-PD-RC...Unit No. Archaeology Inc. 11. ContractfC) or Grant(G- No. 120 Beta Drive Lafayette, Louisiana (clDACW2981-M-1470 (G) Sponsoring Organization Name and...Cultural Resources Section, USACOE, who has long appreciated the need for sound projec- tive information on cultural resources locations. Although

  4. 78 FR 66746 - Medical Device User Fee and Modernization Act; Notice to Public of Web Site Location of Fiscal...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-06

    ... Public of Web Site Location of Fiscal Year 2014 Proposed Guidance Development AGENCY: Food and Drug... the Web site location where the Agency will post two lists of guidance documents the Center for... updates to the A-list and B-list announced in this notice. This notice announces the Web site location...

  5. DNase II digestion of the nucleosome core: precise locations and relative exposures of sites.

    PubMed

    Lutter, L C

    1981-09-11

    The precise locations and relative exposures of the DNase II-accessible sites in the nucleosome core DNA are determined using techniques previously employed for the enzyme DNase I. It is found that there are a number of similarities between the site exposure patterns for the two enzymes but that in general the DNase II seems to discriminate less among adjacent sites' accessibilities than does DNase I. The two enzymes attack essentially the same positions in the DNA, the average difference between the precise location of the site being less than one-half base for the two enzymes. Such close similarities in the digestion patterns of two enzymes with such different mechanisms of scission show that the patterns reflect the structure of the nucleosome core and not merely the properties of the particular enzyme used.

  6. Site location optimization of regional air quality monitoring network in China: methodology and case study.

    PubMed

    Zheng, Junyu; Feng, Xiaoqiong; Liu, Panwei; Zhong, Liuju; Lai, Senchao

    2011-11-01

    Regional air quality monitoring networks (RAQMN) are urgently needed in China due to increasing regional air pollution in city clusters, arising from rapid economic development in recent decades. This paper proposes a methodological framework for site location optimization in designing a RAQMN adapting to air quality management practice in China. The framework utilizes synthetic assessment concentrations developed from simulated data from a regional air quality model in order to simplify the optimal process and to reduce costs. On the basis of analyzing various constraints such as cost and budget, terrain conditions, administrative district, population density and spatial coverage, the framework takes the maximum approximate degree as an optimization objective to achieve site location optimization of a RAQMN. An expert judgment approach was incorporated into the framework to help adjust initial optimization results in order to make the network more practical and representative. A case study was used to demonstrate the application of the framework, indicating that it is feasible to conduct site optimization for a RAQMN design in China. The effects of different combinations of primary and secondary pollutants on site location optimization were investigated. It is suggested that the network design considering both primary and secondary pollutants could better represent regional pollution characteristics and more extensively reflect temporal and spatial variations of regional air quality. The work shown in this study can be used as a reference to guide site location optimization of a RAQMN design in China or other regions of the world.

  7. Effects of Vegetation Structure on the Location of Lion Kill Sites in African Thicket

    PubMed Central

    Davies, Andrew B.; Tambling, Craig J.; Kerley, Graham I. H.; Asner, Gregory P.

    2016-01-01

    Predator-prey relationships are integral to ecosystem stability and functioning. These relationships are, however, difficult to maintain in protected areas where large predators are increasingly being reintroduced and confined. Where predators make kills has a profound influence on their role in ecosystems, but the relative importance of environmental variables in determining kill sites, and how these might vary across ecosystems is poorly known. We investigated kill sites for lions in South Africa’s thicket biome, testing the importance of vegetation structure for kill site locations compared to other environmental variables. Kill sites were located over four years using GPS telemetry and compared to non-kill sites that had been occupied by lions, as well as to random sites within lion ranges. Measurements of 3D vegetation structure obtained from Light Detection and Ranging (LiDAR) were used to calculate the visible area (viewshed) around each site and, along with wind and moonlight data, used to compare kill sites between lion sexes, prey species and prey sexes. Viewshed area was the most important predictor of kill sites (sites in dense vegetation were twice as likely to be kill sites compared to open areas), followed by wind speed and, less so, moonlight. Kill sites for different prey species varied with vegetation structure, and male prey were killed when wind speeds were higher compared to female prey of the same species. Our results demonstrate that vegetation structure is an important component of predator-prey interactions, with varying effects across ecosystems. Such differences require consideration in terms of the ecological roles performed by predators, and in predator and prey conservation. PMID:26910832

  8. Effects of Vegetation Structure on the Location of Lion Kill Sites in African Thicket.

    PubMed

    Davies, Andrew B; Tambling, Craig J; Kerley, Graham I H; Asner, Gregory P

    2016-01-01

    Predator-prey relationships are integral to ecosystem stability and functioning. These relationships are, however, difficult to maintain in protected areas where large predators are increasingly being reintroduced and confined. Where predators make kills has a profound influence on their role in ecosystems, but the relative importance of environmental variables in determining kill sites, and how these might vary across ecosystems is poorly known. We investigated kill sites for lions in South Africa's thicket biome, testing the importance of vegetation structure for kill site locations compared to other environmental variables. Kill sites were located over four years using GPS telemetry and compared to non-kill sites that had been occupied by lions, as well as to random sites within lion ranges. Measurements of 3D vegetation structure obtained from Light Detection and Ranging (LiDAR) were used to calculate the visible area (viewshed) around each site and, along with wind and moonlight data, used to compare kill sites between lion sexes, prey species and prey sexes. Viewshed area was the most important predictor of kill sites (sites in dense vegetation were twice as likely to be kill sites compared to open areas), followed by wind speed and, less so, moonlight. Kill sites for different prey species varied with vegetation structure, and male prey were killed when wind speeds were higher compared to female prey of the same species. Our results demonstrate that vegetation structure is an important component of predator-prey interactions, with varying effects across ecosystems. Such differences require consideration in terms of the ecological roles performed by predators, and in predator and prey conservation.

  9. Number and locations of agonist binding sites required to activate homomeric Cys-loop receptors.

    PubMed

    Rayes, Diego; De Rosa, María José; Sine, Steven M; Bouzat, Cecilia

    2009-05-06

    Homo-pentameric Cys-loop receptors contain five identical agonist binding sites, each formed at a subunit interface. To determine the number and locations of binding sites required to generate a stable active state, we constructed a receptor subunit with a mutation that disables the agonist binding site and a reporter mutation that alters unitary conductance and coexpressed mutant and nonmutant subunits. Although receptors with a range of different subunit compositions are produced, patch-clamp recordings reveal that the amplitude of each single-channel opening event reports the number and, for certain subunit combinations, the locations of subunits with intact binding sites. We find that receptors with three binding sites at nonconsecutive subunit interfaces exhibit maximal mean channel open time, receptors with binding sites at three consecutive or two nonconsecutive interfaces exhibit intermediate open time, and receptors with binding sites at two consecutive or one interface exhibit brief open time. Macroscopic recordings after rapid application of agonist reveal that channel activation slows and the extent of desensitization decreases as the number of binding sites per receptor decreases. The overall results provide a framework for defining mechanisms of activation and drug modulation for homo-pentameric Cys-loop receptors.

  10. Foraging location and site fidelity of the Double-crested Cormorant on Oneida Lake, New York

    USGS Publications Warehouse

    Coleman, J.T.H.; Richmond, M.E.; Rudstam, L. G.; Mattison, P.M.

    2005-01-01

    We studied the foraging behavior of the Double-crested Cormorant (Phalacrocorax auritus) on Oneida Lake, New York, by monitoring the activities of 27 radio-tagged birds in July and August of 1999 and 2000. A total of 224 locations were obtained of cormorants actively diving, and presumed foraging, at the time of detection. A geographic information system was used to examine foraging distances from the nesting island, the water depth and type of substrate at preferred foraging sites, and to estimate kernel home ranges for analysis of individual foraging site fidelity. An explanatory model was developed to determine parameters affecting the distance to cormorant foraging sites. The mean distance to foraging locations of tagged cormorants from the colony site was 2,920 m (SE ?? 180 m, max = 14,190 m), and 52% of the locations were within 2,000 m of the nesting island. No cormorant was observed making daily foraging trips to outside water bodies. Mean foraging distance was greater during morning than in the afternoon, and there was a significant effect of the time of day on distance. There was no significant effect of sex date, a seasonal measure on distance to foraging location. Individual cormorants exhibited fidelity to specific foraging sites. Most cormorants foraged in close proximity to the nesting island much of the time, while those detected further from the island tended to return repeatedly to the same locations. Ninety percent of the foraging locations were in water depths ???7.5 m, and most were in water 2.5-5 m deep. Compositional analysis of habitat use revealed a preference for these depths, along with substrates of cobble with rubble, and silt with clay.

  11. A permanent ion binding site located between two gates of the Shaker K+ channel.

    PubMed Central

    Harris, R E; Larsson, H P; Isacoff, E Y

    1998-01-01

    K+ channels can be occupied by multiple permeant ions that appear to bind at discrete locations in the conduction pathway. Neither the molecular nature of the binding sites nor their relation to the activation or inactivation gates that control ion flow are well understood. We used the permeant ion Ba2+ as a K+ analog to probe for K+ ion binding sites and their relationship to the activation and inactivation gates. Our data are consistent with the existence of three single-file permeant-ion binding sites: one deep site, which binds Ba2+ with high affinity, and two more external sites whose occupancy influences Ba2+ movement to and from the deep site. All three sites are accessible to the external solution in channels with a closed activation gate, and the deep site lies between the activation gate and the C-type inactivation gate. We identify mutations in the P-region that disrupt two of the binding sites, as well as an energy barrier between the sites that may be part of the selectivity filter. PMID:9545043

  12. A permanent ion binding site located between two gates of the Shaker K+ channel.

    PubMed

    Harris, R E; Larsson, H P; Isacoff, E Y

    1998-04-01

    K+ channels can be occupied by multiple permeant ions that appear to bind at discrete locations in the conduction pathway. Neither the molecular nature of the binding sites nor their relation to the activation or inactivation gates that control ion flow are well understood. We used the permeant ion Ba2+ as a K+ analog to probe for K+ ion binding sites and their relationship to the activation and inactivation gates. Our data are consistent with the existence of three single-file permeant-ion binding sites: one deep site, which binds Ba2+ with high affinity, and two more external sites whose occupancy influences Ba2+ movement to and from the deep site. All three sites are accessible to the external solution in channels with a closed activation gate, and the deep site lies between the activation gate and the C-type inactivation gate. We identify mutations in the P-region that disrupt two of the binding sites, as well as an energy barrier between the sites that may be part of the selectivity filter.

  13. Random site dilution properties of frustrated magnets on a hierarchical lattice.

    PubMed

    Fortin, Jean-Yves

    2013-07-24

    We present a method to analyze the magnetic properties of frustrated Ising spin models on specific hierarchical lattices with random dilution. Disorder is induced by dilution and geometrical frustration rather than randomness in the internal couplings of the original Hamiltonian. The two-dimensional model presented here possesses a macroscopic entropy at zero temperature in the large size limit, very close to the Pauling estimate for spin-ice on the pyrochlore lattice, and a crossover towards a paramagnetic phase. The disorder due to dilution is taken into account by considering a replicated version of the recursion equations between partition functions at different lattice sizes. An analysis to first order in replica number allows a systematic reorganization of the disorder configurations, leading to a recurrence scheme. This method is numerically implemented to evaluate thermodynamical quantities such as specific heat and susceptibility in an external field.

  14. 14 CFR 420.23 - Launch site location review-flight corridor.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... Requirements for Obtaining a License § 420.23 Launch site location review—flight corridor. (a) Guided orbital expendable launch vehicle. For a guided orbital expendable launch vehicle, an applicant shall define a flight... this part, to contain debris with a ballistic coefficient of ≥ 3 pounds per square foot, from any non...

  15. 14 CFR 420.23 - Launch site location review-flight corridor.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... Requirements for Obtaining a License § 420.23 Launch site location review—flight corridor. (a) Guided orbital expendable launch vehicle. For a guided orbital expendable launch vehicle, an applicant shall define a flight... this part, to contain debris with a ballistic coefficient of ≥3 pounds per square foot, from any non...

  16. 14 CFR 420.23 - Launch site location review-flight corridor.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... Requirements for Obtaining a License § 420.23 Launch site location review—flight corridor. (a) Guided orbital expendable launch vehicle. For a guided orbital expendable launch vehicle, an applicant shall define a flight... this part, to contain debris with a ballistic coefficient of ≥ 3 pounds per square foot, from any non...

  17. A GENERAL SITE LOCATION STUDY FOR A REGIONAL COLLEGE FOR THE OKANAGAN AREA OF BRITISH COLUMBIA.

    ERIC Educational Resources Information Center

    GILES, FREDERIC T.; AND OTHERS

    THE FEASIBILITY AND GENERAL SITE LOCATION OF A REGIONAL COLLEGE FOR TEN SCHOOL DISTRICTS IN THE OKANAGAN AREA OF BRITISH COLUMBIA WAS STUDIED AND ESTABLISHED. GEOGRAPHIC CENTERS OF POPULATION DISTRIBUTION, TRANSPORTATION, GENERAL ECONOMY AND SCHOOL POPULATIONS FOR GRADES 1-12 AND 13-14 WERE DETERMINED FROM THE ANALYSIS OF DEMOGRAPHIC, GEOGRAPHIC…

  18. Locating Sites of Negations and Denegating "Negative Essentializing": Rereading Virginia Woolf's "A Room of One's Own"

    ERIC Educational Resources Information Center

    Adhikari, Manahari

    2014-01-01

    This essay examines how Virginia Woolf uses writing as a tool to locate sites of negations, such as women's exclusion from places of power and knowledge, and to expose negative essentializing that permeates patriarchal structure in "A Room of One's Own." Whereas scholarship on the book has explored a wide range of issues including sex,…

  19. Water Quality Sampling Locations Along the Shoreline of the Columbia River, Hanford Site, Washington

    SciTech Connect

    Peterson, Robert E.; Patton, Gregory W.

    2009-12-14

    As environmental monitoring evolved on the Hanford Site, several different conventions were used to name or describe location information for various sampling sites along the Hanford Reach of the Columbia River. These methods range from handwritten descriptions in field notebooks to the use of modern electronic surveying equipment, such as Global Positioning System receivers. These diverse methods resulted in inconsistent archiving of analytical results in various electronic databases and published reports because of multiple names being used for the same site and inaccurate position data. This document provides listings of sampling sites that are associated with groundwater and river water sampling. The report identifies names and locations for sites associated with sampling: (a) near-river groundwater using aquifer sampling tubes; (b) riverbank springs and springs areas; (c) pore water collected from riverbed sediment; and (d) Columbia River water. Included in the listings are historical names used for a particular site and the best available geographic coordinates for the site, as of 2009. In an effort to create more consistency in the descriptive names used for water quality sampling sites, a naming convention is proposed in this document. The convention assumes that a unique identifier is assigned to each site that is monitored and that this identifier serves electronic database management requirements. The descriptive name is assigned for the convenience of the subsequent data user. As the historical database is used more intensively, this document may be revised as a consequence of discovering potential errors and also because of a need to gain consensus on the proposed naming convention for some water quality monitoring sites.

  20. Bethe lattice model with site and bond correlations for continuum percolation by isotropic systems of monodisperse rods

    NASA Astrophysics Data System (ADS)

    Chatterjee, Avik P.

    2017-08-01

    A model for connectedness percolation in isotropic systems of monodisperse cylinders is developed that employs a generalization of the tree-like Bethe lattice. The traditional Bethe lattice is generalized by incorporating (within a heuristic, mean-field framework) a pair of correlation parameters that describe (i) the states of occupancy of neighboring sites and (ii) the states of directly adjacent bonds, which are also allowed to be in either of two possible states. Averaging over the fluctuating states of neighboring bonds provides an operational means to modulate the dependence upon volume fraction of the average number of next-nearest-neighbor rod-rod contacts without altering the number of such nearest-neighbor interparticle contacts. The percolation threshold is shown to be a sensitive function of the average number of such next-nearest-neighbor contacts, and therefore of the quality of dispersion of the particles.

  1. Locating nuclear explosions at the Chinese test site near Lop Nor

    SciTech Connect

    Gupta, V.

    1995-11-01

    This paper describes how commercial satellite imagery was used along with teleseismic P-wave arrival time data to locate 21 Chinese nuclear tests. The results include a set of refined location estimates for atmospheric and underground tests as well as error vectors from the initial seismic location estimates to the refined location estimates. The analysis of the results provided new information on Chinese near testing patterns which have been used to revise China`s testing history and assist the satellite monitoring of the test site. The paper concludes with an evaluation of commercial satellite imaging for monitoring nuclear tests and an assessment of the implications of the results with respect to the verification of a comprehensive test ban (CTB).

  2. Tumour location within the breast: Does tumour site have prognostic ability?

    PubMed

    Rummel, Seth; Hueman, Matthew T; Costantino, Nick; Shriver, Craig D; Ellsworth, Rachel E

    2015-01-01

    Tumour location within the breast varies with the highest frequency in the upper outer quadrant (UOQ) and lowest frequency in the lower inner quadrant (LIQ). Whether tumour location is prognostic is unclear. To determine whether tumour location is prognostic, associations between tumour site and clinicopathological characteristics were evaluated. All patients enrolled in the Clinical Breast Care Project whose tumour site-UOQ, upper inner quadrant (UIQ), central, LIQ, lower outer quadrant (LOQ)-was determined by a single, dedicated breast pathologist were included in this study. Patients with multicentric disease (n = 122) or tumours spanning multiple quadrants (n = 381) were excluded from further analysis. Clinicopathological characteristics were analysed using chi-square tests for univariate analysis with multivariate analysis performed using principal components analysis (PCA) and multiple logistic regression. Significance was defined as P < 0.05. Of the 980 patients with defined tumour location, 30 had bilateral disease. Tumour location in the UOQ (51.5%) was significantly higher than in the UIQ (15.6%), LOQ (14.2%), central (10.6%), or LIQ (8.1%). Tumours in the central quadrant were significantly more likely to have higher tumour stage (P = 0.003) and size (P < 0.001), metastatic lymph nodes (P < 0.001), and mortality (P = 0.011). After multivariate analysis, only tumour size and lymph node status remained significantly associated with survival. Evaluation of tumour location as a prognostic factor revealed that although tumours in the central region are associated with less favourable outcome, these associations are not independent of location but rather driven by larger tumour size. Tumours in the central region are more difficult to detect mammographically, resulting in larger tumour size at diagnosis and thus less favourable prognosis. Together, these data demonstrate that tumour location is not an independent prognostic factor.

  3. Capacitated location of collection sites in an urban waste management system

    SciTech Connect

    Ghiani, Gianpaolo; Lagana, Demetrio; Manni, Emanuele; Triki, Chefi

    2012-07-15

    Urban waste management is becoming an increasingly complex task, absorbing a huge amount of resources, and having a major environmental impact. The design of a waste management system consists in various activities, and one of these is related to the location of waste collection sites. In this paper, we propose an integer programming model that helps decision makers in choosing the sites where to locate the unsorted waste collection bins in a residential town, as well as the capacities of the bins to be located at each collection site. This model helps in assessing tactical decisions through constraints that force each collection area to be capacitated enough to fit the expected waste to be directed to that area, while taking into account Quality of Service constraints from the citizens' point of view. Moreover, we propose an effective constructive heuristic approach whose aim is to provide a good solution quality in an extremely reduced computational time. Computational results on data related to the city of Nardo, in the south of Italy, show that both exact and heuristic approaches provide consistently better solutions than that currently implemented, resulting in a lower number of activated collection sites, and a lower number of bins to be used.

  4. Factors affecting the location and shape of face seal leak sites on half-mask respirators.

    PubMed

    Oestenstad, Riedar Kent; Bartolucci, Alfred A

    2010-06-01

    While there have been a number of studies on the effect of leak site and shape on the magnitude of measured leakage through respirator face seals, there have been very few studies to identify the location and size of these leaks. In a previous study we used a method of identifying the location and shape of respirator leaks on a half-mask respirator by the deposition of a fluorescent tracer during a fit test, and testing for their association with facial dimensions. The purpose of this study was to apply that methodology to conduct multiple fit tests to determine if gender, respirator brand, repeated fit tests, and test exercises affected the location and shape of face seal leak sites. Categorical analysis found that none of these factors had a significant effect on the location and shape of leaks. General linear model analysis found some significant effects of the study factors on leaks, but facial dimensions had a greater effect, and there were significant differences between facial dimensions of subjects with a leak and those without. Significant differences in leak site distributions between this and the previous study may have been due to differences in facial dimensions and racial/ethnic composition. Twice as many diffuse leaks as point leaks were observed in both studies, indicating that slit-like leaks would be most appropriate on mannequins used in laboratory respirator leakage studies, and in respirator flow and penetration models. That the study factors had no significant effects in the categorical analysis, significant effects for facial dimensions were found in the linear analysis, and leak site distribution differences between this and our previous study may have been affected by differences in facial dimensions, indicate that, in addition to size, the shape of an individual's face may be an important determinant of leak sites on a half-mask respirator. This would have implications for the design of respirator facepieces and in the selection of

  5. Oscillating multidromion excitations in higher-dimensional nonlinear lattice with intersite and external on-site potentials using symbolic computation

    NASA Astrophysics Data System (ADS)

    Srividya, B.; Kavitha, L.; Ravichandran, R.; Gopi, D.

    2014-01-01

    We show by an extensive method of quasi-discrete multiple-scale approximation that nonlinear multi-dimensional lattice waves subjected to intersite and external on-site potentials are found to be governed by (N + 1)-dimensional nonlinear Schrödinger (NLS) equation. In particular, the resonant mode interaction of (2+1)-dimensional NLS equation has been identified and the theory allows the inclusion of transverse effect. We apply the exponential function method to the (2+1)-dimensional NLS equation and obtain the class of soliton solutions with a purely algebraic computational method. Notably, we discuss in detail the effects of the external on-site potentials on the explicit form of the soliton solution generated recursively. Under the action of the external on-site potentials, the model presents a rich variety of oscillating multidromion patterns propagating in the system.

  6. Discovery of native metal ion sites located on the ferredoxin docking side of photosystem I.

    SciTech Connect

    Utschig, L. M.; Chen, L. X.; Poluektov, O. G.; Chemical Sciences and Engineering Division

    2008-03-25

    Photosystem I (PSI) is a large membrane protein that catalyzes light-driven electron transfer across the thylakoid membrane from plastocyanin located in the lumen to ferredoxin in the stroma. Metal analysis reveals that PSI isolated from the cyanobacterial membranes of Synechococcus leopoliensis has a near-stoichiometric 1 molar equiv of Zn2+ per PSI monomer and two additional surface metal ion sites that favor Cu2+ binding. Two-dimensional hyperfine sublevel correlation (HYSCORE) spectroscopy reveals coupling to the so-called remote nitrogen of a single histidine coordinated to one of the Cu2+ centers. EPR and X-ray absorption fine structure (XAFS) studies of 2Cu?PSI complexes reveal the direct interaction of ferredoxin with the Cu2+ centers on PSI, establishing the location of native metal sites on the ferredoxin docking side of PSI. On the basis of these spectroscopic results and previously reported site-directed mutagenesis studies, inspection of the PSI crystal structure reveals a cluster of three highly conserved residues, His(D95), Glu(D103), and Asp(C23), as a likely Cu2+ binding site. The discovery of surface metal sites on the acceptor side of PSI provides a unique opportunity to probe the stromal region of PSI and the interactions of PSI with its reaction partner, the soluble electron carrier protein ferredoxin.

  7. Feasibility study for locating archaeological village sites by satellite remote sensing techniques. [multispectral photography of Alaska

    NASA Technical Reports Server (NTRS)

    Cook, J. P. (Principal Investigator); Stringer, W. J.

    1974-01-01

    The author has identified the following significant results. The objective is to determine the feasibility of detecting large Alaskan archaeological sites by satellite remote sensing techniques and mapping such sites. The approach used is to develop digital multispectral signatures of dominant surface features including vegetation, exposed soils and rock, hydrological patterns and known archaeological sites. ERTS-1 scenes are then printed out digitally in a map-like array with a letter reflecting the most appropriate classification representing each pixel. Preliminary signatures were developed and tested. It was determined that there was a need to tighten up the archaeological site signature by developing accurate signatures for all naturally-occurring vegetation and surface conditions in the vicinity of the test area. These second generation signatures have been tested by means of computer printouts and classified tape displays on the University of Alaska CDU-200 and by comparison with aerial photography. It has been concluded that the archaeological signatures now in use are as good as can be developed. Plans are to print out signatures for the entire test area and locate on topographic maps the likely locations of archaeological sites within the test area.

  8. Quantum Computation with Neutral Atoms at Addressable Optical Lattice Sites and Atoms in Confined Geometries

    DTIC Science & Technology

    2014-10-13

    SECURITY CLASSIFICATION OF: We have performed a set of experiments using arrays of 1D Bose gases in various configurations. Uncoupled 1D gases have been...used to study the limits of statistical mechanics near integrable points. We have shown that nearly integrable gases thermalize at an even slower...NAME(S) AND ADDRESS (ES) U.S. Army Research Office P.O. Box 12211 Research Triangle Park, NC 27709-2211 ultracold atoms, optical lattices, 1D gases

  9. Momentum, water vapor, and carbon dioxide exchange at a centrally located prairie site during FIFE

    NASA Technical Reports Server (NTRS)

    Verma, Shashi B.; Kim, Joon; Clement, Robert J.

    1992-01-01

    Eddy correlation measurements were taken of momentum, water vapor, sensible heat, and CO2 at a centrally located plateau site in the FIFE study area from May to October 1987. Approximately 82 percent of the vegetation at the site was composed of several C4 grass species, with the remainder being C3 grasses, forbs, wedges, and woody plants. Precipitation was about normal during the study period, except for a three week dry period in late July to early August that caused moisture stress conditions.

  10. Thermal rectification in one-dimensional mass-graded lattices with an on-site potential

    NASA Astrophysics Data System (ADS)

    Romero-Bastida, M.; Ramírez-Jarquín, Marcelino

    2017-01-01

    In this work we perform a systematic analysis of various structural parameters that have influence on the thermal rectification effect, i.e. asymmetrical heat flow, and the negative differential thermal resistance present in a one-dimensional anharmonic lattice with mass gradient and coupled to a substrate potential. For two different mass profiles (linear and exponential) we compute the thermal conductivity as a function of the system size and determined that its value, computed with the system coupled to the substrate potential, is lower than the corresponding one without such potential for each system size, with a highest value of the divergence exponent corresponding to the exponential mass profile. The rectification efficiency is always higher for the linear mass-graded lattice in all the studied cases, whereas that of the exponential mass-graded one is largely insensitive to the variation, in the considered range of values, of the studied parameters. This latter type of lattice presents no negative differential thermal resistance in the low temperature regime whatsoever.

  11. 75 FR 60761 - Medical Device User Fee and Modernization Act; Notice to Public of Web site Location of Fiscal...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-01

    ... Public of Web site Location of Fiscal Year 2011 Proposed Guidance Development AGENCY: Food and Drug Administration, HHS. ACTION: Notice. ] SUMMARY: The Food and Drug Administration (FDA) is announcing the Web site... topics, or suggestions for new or different guidances. This notice announces the Web site location of the...

  12. Analytical studies on a new lattice hydrodynamic traffic flow model with consideration of traffic current cooperation among three consecutive sites

    NASA Astrophysics Data System (ADS)

    Li, Zhipeng; Zhong, Chenjie; Chen, Lizhu; Xu, Shangzhi; Qian, Yeqing

    2016-09-01

    In this paper, the original lattice hydrodynamic model of traffic flow is extended to take into account the traffic current cooperation among three consecutive sites. The basic idea of the new consideration is that the cooperative traffic current of the considered site is determined by the traffic currents of the site itself, the immediately preceding site and the immediately following one. The stability criterion of the extended model is obtained by applying the linear stability analysis. The result reveals the traffic current cooperation of the immediately preceding site is positive correlation with the stability of traffic system, while negative correlation is found between the traffic stability and the traffic current cooperation of the nearest follow site. To describe the phase transition, the modified KdV equation near the critical point is derived by using the reductive perturbation method, with obtaining the dependence of the propagation kink solution for traffic jams on the traffic current cooperation among three consecutive sites. The direct numerical are conducted to verify the results of theoretical analysis, and explore the effects of the traffic current cooperation on the traffic flux of the vehicle flow system.

  13. Perform Initial Measurements to Investigate Microwave Detection for Location of Hemorrhage Sites Within the Body

    DTIC Science & Technology

    1998-08-01

    ability of electromagnetic waves in the RF and microwave region to detect regions of blood pooling in the body. The purpose is to demonstrate the...exposure to electromagnetic waves. The data presented is based upon research and approximations to the actual problem. RF or microwave energy interactions...DAMD17-96-C-6074 TITLE: Perform Initial Measurements to Investigate Microwave Detection for Location of Hemorrhage Sites Within the Body PRINCIPAL

  14. Pain Site Frequency and Location in Sickle Cell Disease: the PiSCES Project

    PubMed Central

    McClish, Donna K; Smith, Wally R; Dahman, Bassam A; Levenson, James L; Roberts, John D; Penberthy, Lynne T; Aisiku, Imoigele P; Roseff, Susan D; Bovbjerg, Viktor E

    2009-01-01

    Treatment options for sickle cell disease (SCD) pain could be tailored to pain locations. But few epidemiologic descriptions of SCD pain location exist; these are based on few subjects over short time periods. We examined whether SCD pain locations vary by disease genotype, gender, age, frequency of pain, depression, pain crisis or healthcare utilization. We enrolled 308 adults with SCD in 2002–2004. Subjects kept daily pain diaries for up to 6 months, including a body chart. Analyses employed mixed model and generalized estimating equations. 260 subjects completed at least one body chart. An average of 3.3/16 sites (25%) were painful. The number of pain sites varied by age, depression, frequent pain days, crisis and unplanned hospital/ED utilization. Lower back, knee/shin and hip, hurt on average more than a third of pain days, while jaw and pelvis hurt on fewer than 10% of days. Odds of a crisis were increased substantially when pain was in the arm, shoulder, upper back, sternum, clavicle, chest or pelvis (OR>1.5) while the odds of unplanned utilization were substantially increased for the sternum, clavicle and chest (OR>2.0). Pain in SCD varies considerably both within and between subjects, although it occurs most commonly in the lower back and lower extremities. The number and location of pain sites varies significantly by age, frequent pain, crisis and utilization. Identification and understanding of combinations of pain location and intensity may help to understand the etiology of SCD and improve SCD management. PMID:19631468

  15. Determining Optimal Location and Numbers of Sample Transects for Characterization of UXO Sites

    SciTech Connect

    BILISOLY, ROGER L.; MCKENNA, SEAN A.

    2003-01-01

    Previous work on sample design has been focused on constructing designs for samples taken at point locations. Significantly less work has been done on sample design for data collected along transects. A review of approaches to point and transect sampling design shows that transects can be considered as a sequential set of point samples. Any two sampling designs can be compared through using each one to predict the value of the quantity being measured on a fixed reference grid. The quality of a design is quantified in two ways: computing either the sum or the product of the eigenvalues of the variance matrix of the prediction error. An important aspect of this analysis is that the reduction of the mean prediction error variance (MPEV) can be calculated for any proposed sample design, including one with straight and/or meandering transects, prior to taking those samples. This reduction in variance can be used as a ''stopping rule'' to determine when enough transect sampling has been completed on the site. Two approaches for the optimization of the transect locations are presented. The first minimizes the sum of the eigenvalues of the predictive error, and the second minimizes the product of these eigenvalues. Simulated annealing is used to identify transect locations that meet either of these objectives. This algorithm is applied to a hypothetical site to determine the optimal locations of two iterations of meandering transects given a previously existing straight transect. The MPEV calculation is also used on both a hypothetical site and on data collected at the Isleta Pueblo to evaluate its potential as a stopping rule. Results show that three or four rounds of systematic sampling with straight parallel transects covering 30 percent or less of the site, can reduce the initial MPEV by as much as 90 percent. The amount of reduction in MPEV can be used as a stopping rule, but the relationship between MPEV and the results of excavation versus no

  16. Plume mapping and shipboard chemical data used to locate new vent sites in the Lau Basin

    NASA Astrophysics Data System (ADS)

    Edmonds, H. N.; German, C. R.; Breier, J. A.; Connelly, D. P.; Townsend-Small, A.; Resing, J. A.; Aumack, C.; Baker, E. T.; Langmuir, C. H.

    2004-12-01

    A central goal of the second Ridge2000 cruise (September-October 2004) to the Lau backarc basin in the southwest Pacific is to locate, map, and image new vent sites on the East Lau Spreading Center and the northern portion of the Valu Fa Ridge. Our primary tool for plume mapping and vent location is the Autonomous Benthic Explorer (ABE), including novel in situ chemical sensors (see abstracts by Yoerger et al. and German et al. in this session). In addition, we are using MAPRs (Miniature Autonomous Plume Recorders) to measure profiles of temperature and optical backscatter on dredge and rock core lowerings, and shipboard analysis of methane, hydrogen, pH, iron, and manganese from CTD casts, to locate and characterize the plumes. This presentation will focus on the profile data and chemical analyses, which we use to provide a preliminary comparison of chemical characteristics between vent fields.

  17. Developing a fuzzy decision support system to determine the location of a landfill site.

    PubMed

    Alves, Maria C M; Lima, Beatriz S L P; Evsukoff, Alexandre G; Vieira, Ian N

    2009-10-01

    This paper presents two case studies of municipal solid waste site location using a decision-support system based on fuzzy logic. This problem is very complex, as it requires the evaluation of different criteria, which involve environmental, social and economic data. Such data deal with a wide range of information that presents not only quantitative, but also qualitative knowledge. In order to deal with this characteristic, the developed system employs fuzzy rules due to its ability to treat linguistic variables and the human way of thinking. Conventional approaches tend to be less effective in dealing with the imprecise or vague nature of the linguistic assessment. A case study for selecting the location of a new municipal solid waste landfill for the city of Petropolis in Rio de Janeiro is presented. Testing of the proposed method was carried out using data from the municipal solid waste location for another municipality in Rio de Janeiro, Brazil.

  18. Identification of amino acids located in the antibody binding sites of human hepatitis A virus.

    PubMed

    Nainan, O V; Brinton, M A; Margolis, H S

    1992-12-01

    Antigenic mutants of human hepatitis A virus (human-HAV) were isolated by their resistance to neutralizing monoclonal antibodies raised to human-HAV. The nucleotide sequence determined for the capsid regions of 12 mutants identified amino acid changes that clustered in three non-overlapping sites; one in VP3 and two in VP1. All mutants had a change at amino acid residue 70 in VP3, indicating its primary importance for antibody binding. Ten mutants had two amino acid changes occurring in the VP3 site as well as one in one of the two VP1 sites. These data suggest that both sites in VP1 interact with the single VP3 site to form the immunodominant epitope of HAV. The amino acid changes found in the antigenic mutants of human-HAV selected in this study were located in the same positions as changes found in strains of HAV isolated from Old World monkeys. These simian strains of HAV are not recognized by most monoclonal antibodies raised to human-HAV, suggesting that the observed amino acid changes are part of the antibody binding site.

  19. Migration and Residential Location of Workers at Nuclear Power Plant Construction Sites Forecasting Methodology

    SciTech Connect

    Malhotra, S.; Manninen, D.

    1981-04-01

    The primary objective of this study was to improve the accuracy of socioeconomic impact assessments by providing an improved methodology for predicting the number of inmigrating workers and their residential location patterns at future nuclear power plant construction projects. Procedures for estimating several other variables which have important implications with respect to socioeconomic impact assessment (i.e., relocation of dependents, intention to remain in the area, type of housing selected, marital status, and average family size) were also developed. The analysis was based on worker survey data from 28 surveys which were conducted at 13 nuclear power plant construction sites. These survey data were examined to identify patterns of variation in variables of interest across sites as well as across various worker groups. In addition, considerable secondary data reflecting various regional and project characteristics were gathered for each site. These data were used to estimate the effects of factors underlying the observed variation in craft-specific migrant proportions and the residential location patterns of inmigrating workers across sites and surveys. The results of these analyses were then used as a basis for the specification of the forecasting procedures.

  20. Location and site characteristics of the ambient ground-water-quality-monitoring network in West Virginia

    USGS Publications Warehouse

    Kozar, M.D.; Brown, D.P.

    1995-01-01

    Ground-water-quality-monitoring sites have been established in compliance with the 1991 West Virginia "Groundwater Protection Act." One of the provisions of the "Groundwater Protection Act" is to conduct ground-water sampling, data collection, analyses, and evaluation with sufficient frequency so as to ascertain the characteristics and quality of ground water and the sufficiency of the ground- water protection programs established pursuant to the act (Chapter 20 of the code of West Virginia, 1991, Article 5-M). Information for 26 monitoring sites (wells and springs) which comprise the Statewide ambient ground-water-quality-monitoring network is presented. Areas in which monitoring sites were needed were determined by the West Virginia Division of Environmental Protection, Office of Water Resources in consultation with the U.S. Geological Survey (USGS). Initial sites were chosen on the basis of recent hydrogeologic investigations conducted by the USGS and from data stored in the USGS Ground Water Site Inventory database. Land use, aquifer setting, and areal coverage of the State are three of the more important criteria used in site selection. A field reconnaissance was conducted to locate and evaluate the adequacy of selected wells and springs. Descriptive information consisting of site, geologic, well construction, and aquifer-test data has been compiled. The 26 sites will be sampled periodically for iron, manganese, most common ions (for example, calcium, magnesium, sodium, potassium, sulfate, chloride, bicarbonate), volatile and semivolatile organic compounds (for example, pesticides and industrial solvents), and fecal coliform and fecal streptococcus bacteria. Background information explaining ground-water systems and water quality within the State has been included.

  1. Positively charged carbon vacancy in three inequivalent lattice sites of 6H-SiC: Combined EPR and density functional theory study

    SciTech Connect

    Bratus', V.Ya.; Petrenko, T.T.; Okulov, S.M.; Petrenko, T.L.

    2005-03-15

    The Ky1, Ky2, and Ky3 centers are the dominant defects produced in the electron-irradiated p-type 6H-SiC crystals. The electron paramagnetic resonance study of these defects has been performed in the temperature range of 4.2-300 K at X, K, and Q bands. The centers are characterized by the fourfold silicon coordination established on a basis of the observed hyperfine structure. At low temperatures both Ky1 and Ky2 defects reveal the C{sub S} symmetry that only slightly deviates from the D{sub 2d} one. At high temperatures, the thermally activated reorientation from one Jahn-Teller distortion to the others causes the averaging of the Ky1 and Ky2 spectra in such a manner that their spin-Hamiltonians correspond to the axial symmetry. The Ky3 center has axial symmetry in all the temperature range under investigation. Its hyperfine parameters for the first-shell silicon atoms are substantially different from those determined for the Ky1 and Ky2 centers. Based on the density functional theory, the calculations of the electronic structure of a number of fourfold silicon coordinated defects have been carried out for the unambiguous identification of the observed defects through the comparison of experimentally determined and calculated hyperfine parameters. The present study proves an assignment of the Ky1, Ky2, and Ky3 centers to the positively charged carbon vacancy located in two quasicubic and hexagonal sites of the 6H-SiC lattice, respectively. The features of the V{sub C}{sup +} defect related to the multivalley character of its potential energy surface are also discussed. It is shown that this defect can be localized in the minima of different symmetry depending on the occupied lattice site, and these minima are experimentally distinguishable by the values of hyperfine parameters.

  2. A reliable facility location design model with site-dependent disruption in the imperfect information context.

    PubMed

    Yun, Lifen; Wang, Xifu; Fan, Hongqiang; Li, Xiaopeng

    2017-01-01

    This paper proposes a reliable facility location design model under imperfect information with site-dependent disruptions; i.e., each facility is subject to a unique disruption probability that varies across the space. In the imperfect information contexts, customers adopt a realistic "trial-and-error" strategy to visit facilities; i.e., they visit a number of pre-assigned facilities sequentially until they arrive at the first operational facility or give up looking for the service. This proposed model aims to balance initial facility investment and expected long-term operational cost by finding the optimal facility locations. A nonlinear integer programming model is proposed to describe this problem. We apply a linearization technique to reduce the difficulty of solving the proposed model. A number of problem instances are studied to illustrate the performance of the proposed model. The results indicate that our proposed model can reveal a number of interesting insights into the facility location design with site-dependent disruptions, including the benefit of backup facilities and system robustness against variation of the loss-of-service penalty.

  3. A reliable facility location design model with site-dependent disruption in the imperfect information context

    PubMed Central

    Yun, Lifen; Wang, Xifu; Fan, Hongqiang; Li, Xiaopeng

    2017-01-01

    This paper proposes a reliable facility location design model under imperfect information with site-dependent disruptions; i.e., each facility is subject to a unique disruption probability that varies across the space. In the imperfect information contexts, customers adopt a realistic “trial-and-error” strategy to visit facilities; i.e., they visit a number of pre-assigned facilities sequentially until they arrive at the first operational facility or give up looking for the service. This proposed model aims to balance initial facility investment and expected long-term operational cost by finding the optimal facility locations. A nonlinear integer programming model is proposed to describe this problem. We apply a linearization technique to reduce the difficulty of solving the proposed model. A number of problem instances are studied to illustrate the performance of the proposed model. The results indicate that our proposed model can reveal a number of interesting insights into the facility location design with site-dependent disruptions, including the benefit of backup facilities and system robustness against variation of the loss-of-service penalty. PMID:28486564

  4. Locating the binding sites of Pb(II) ion with human and bovine serum albumins.

    PubMed

    Belatik, Ahmed; Hotchandani, Surat; Carpentier, Robert; Tajmir-Riahi, Heidar-Ali

    2012-01-01

    Lead is a potent environmental toxin that has accumulated above its natural level as a result of human activity. Pb cation shows major affinity towards protein complexation and it has been used as modulator of protein-membrane interactions. We located the binding sites of Pb(II) with human serum (HSA) and bovine serum albumins (BSA) at physiological conditions, using constant protein concentration and various Pb contents. FTIR, UV-visible, CD, fluorescence and X-ray photoelectron spectroscopic (XPS) methods were used to analyse Pb binding sites, the binding constant and the effect of metal ion complexation on HSA and BSA stability and conformations. Structural analysis showed that Pb binds strongly to HSA and BSA via hydrophilic contacts with overall binding constants of K(Pb-HSA) = 8.2 (±0.8)×10(4) M(-1) and K(Pb-BSA) = 7.5 (±0.7)×10(4) M(-1). The number of bound Pb cation per protein is 0.7 per HSA and BSA complexes. XPS located the binding sites of Pb cation with protein N and O atoms. Pb complexation alters protein conformation by a major reduction of α-helix from 57% (free HSA) to 48% (metal-complex) and 63% (free BSA) to 52% (metal-complex) inducing a partial protein destabilization.

  5. Locating the Binding Sites of Pb(II) Ion with Human and Bovine Serum Albumins

    PubMed Central

    Belatik, Ahmed; Hotchandani, Surat; Carpentier, Robert; Tajmir-Riahi, Heidar-Ali

    2012-01-01

    Lead is a potent environmental toxin that has accumulated above its natural level as a result of human activity. Pb cation shows major affinity towards protein complexation and it has been used as modulator of protein-membrane interactions. We located the binding sites of Pb(II) with human serum (HSA) and bovine serum albumins (BSA) at physiological conditions, using constant protein concentration and various Pb contents. FTIR, UV-visible, CD, fluorescence and X-ray photoelectron spectroscopic (XPS) methods were used to analyse Pb binding sites, the binding constant and the effect of metal ion complexation on HSA and BSA stability and conformations. Structural analysis showed that Pb binds strongly to HSA and BSA via hydrophilic contacts with overall binding constants of KPb-HSA = 8.2 (±0.8)×104 M−1 and KPb-BSA = 7.5 (±0.7)×104 M−1. The number of bound Pb cation per protein is 0.7 per HSA and BSA complexes. XPS located the binding sites of Pb cation with protein N and O atoms. Pb complexation alters protein conformation by a major reduction of α-helix from 57% (free HSA) to 48% (metal-complex) and 63% (free BSA) to 52% (metal-complex) inducing a partial protein destabilization. PMID:22574219

  6. Location of Si vacancies and [Ti(OSi)4] and [Ti(OSi)3OH] sites in the MFI framework: a large cluster and full ab initio study.

    PubMed

    Yuan, Shuping; Si, Hongzong; Fu, Aiping; Chu, Tianshu; Tian, Fenghui; Duan, Yun-Bo; Wang, Jianguo

    2011-02-10

    Titanium silicalite-1 (TS-1) is an important catalyst for selective oxidation reactions. However, the nature and structure of the active sites and the mechanistic details of the catalytic reactions over TS-1 have not been well-understood, leaving a continuous debate on the genesis of active sites on the TS-1 surface in the literature. In this work, the location of Si vacancies and [Ti(OSi)(4)] and [Ti(OSi)(3)OH] sites in the MFI (Framework Type Code of ZSM-5 (Zeolite Socony Mobile-Five)) framework has been studied using a full ab initio method with 40T clusters with a Si:Ti molar ratio of 39:1. It was shown that the former four energetically favorable sites for Si vacancies are T6, T12, T4, and T8 and for Ti centers of [Ti(OSi)(4)] are T10, T4, T8 and T11, being partially the same sites. Whether by replacing Si vacancies or substituting the fully coordinated Si sites, the most preferential site for Ti is T10, which indicates that the insertion mechanism does not affect the favorable sites of Ti in the MFI lattice. For the defective [Ti(OSi)(3)OH] sites, it was found that the Si vacancy at T6 with a Ti at its neighboring T9 site (T6-def-T9-Ti pair) is the most energetically favorable one, followed by a T6-def-T5-Ti pair with a small energy gap. These findings are significant to elucidate the nature of the active sites and the mechanism of reactions catalyzed by TS-1 and to design the TS-1 catalyst.

  7. ZFNGenome: A comprehensive resource for locating zinc finger nuclease target sites in model organisms

    PubMed Central

    2011-01-01

    Background Zinc Finger Nucleases (ZFNs) have tremendous potential as tools to facilitate genomic modifications, such as precise gene knockouts or gene replacements by homologous recombination. ZFNs can be used to advance both basic research and clinical applications, including gene therapy. Recently, the ability to engineer ZFNs that target any desired genomic DNA sequence with high fidelity has improved significantly with the introduction of rapid, robust, and publicly available techniques for ZFN design such as the Oligomerized Pool ENgineering (OPEN) method. The motivation for this study is to make resources for genome modifications using OPEN-generated ZFNs more accessible to researchers by creating a user-friendly interface that identifies and provides quality scores for all potential ZFN target sites in the complete genomes of several model organisms. Description ZFNGenome is a GBrowse-based tool for identifying and visualizing potential target sites for OPEN-generated ZFNs. ZFNGenome currently includes a total of more than 11.6 million potential ZFN target sites, mapped within the fully sequenced genomes of seven model organisms; S. cerevisiae, C. reinhardtii, A. thaliana, D. melanogaster, D. rerio, C. elegans, and H. sapiens and can be visualized within the flexible GBrowse environment. Additional model organisms will be included in future updates. ZFNGenome provides information about each potential ZFN target site, including its chromosomal location and position relative to transcription initiation site(s). Users can query ZFNGenome using several different criteria (e.g., gene ID, transcript ID, target site sequence). Tracks in ZFNGenome also provide "uniqueness" and ZiFOpT (Zinc Finger OPEN Targeter) "confidence" scores that estimate the likelihood that a chosen ZFN target site will function in vivo. ZFNGenome is dynamically linked to ZiFDB, allowing users access to all available information about zinc finger reagents, such as the effectiveness of a given

  8. Large Scale Helium Liquefaction and Considerations for Site Services for a Plant Located in Algeria

    NASA Astrophysics Data System (ADS)

    Froehlich, P.; Clausen, J. J.

    2008-03-01

    The large-scale liquefaction of helium extracted from natural gas is depicted. Based on a block diagram the process chain, starting with the pipeline downstream of the natural-gas plant to the final storage of liquid helium, is explained. Information will be provided about the recent experiences during installation and start-up of a bulk helium liquefaction plant located in Skikda, Algeria, including part-load operation based on a reduced feed gas supply. The local working and ambient conditions are described, including challenging logistic problems like shipping and receiving of parts, qualified and semi-qualified subcontractors, basic provisions and tools on site, and precautions to sea water and ambient conditions. Finally, the differences in commissioning (technically and evaluation of time and work packages) to European locations and standards will be discussed.

  9. Medial Tibial Stress Syndrome: Muscles Located at the Site of Pain

    PubMed Central

    Brown, Ato Ampomah

    2016-01-01

    Objective. The purpose of this study was to examine the relationship between the location of the MTSS pain (posteromedial border of tibia) and the muscles that originate from that site. Method. The study was conducted in the Department of Anatomy of the School of Medical Sciences, University of Cape Coast, and involved the use of 22 cadaveric legs (9 paired and 4 unpaired) from 11 males and 2 females. Findings. The structures that were thus observed to attach directly to the posteromedial border of the tibia were the soleus, the flexor digitorum longus, and the deep crural fascia. The soleus and flexor digitorum longus muscles were observed to attach directly to the posteromedial border of the tibia. The tibialis posterior muscle had no attachment to this site. Conclusion. The findings of this study suggest that if traction is the cause of MTSS then soleus and the flexor digitorum muscles and not the tibialis posterior muscle are the likely cause of MTSS. PMID:27066291

  10. MPL-Net Measurements of Aerosol and Cloud Vertical Distributions at Co-Located AERONET Sites

    NASA Technical Reports Server (NTRS)

    Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Tsay, Si-Chee; Holben, Brent; Starr, David OC. (Technical Monitor)

    2002-01-01

    In the early 1990s, the first small, eye-safe, and autonomous lidar system was developed, the Micropulse Lidar (MPL). The MPL acquires signal profiles of backscattered laser light from aerosols and clouds. The signals are analyzed to yield multiple layer heights, optical depths of each layer, average extinction-to-backscatter ratios for each layer, and profiles of extinction in each layer. In 2000, several MPL sites were organized into a coordinated network, called MPL-Net, by the Cloud and Aerosol Lidar Group at NASA Goddard Space Flight Center (GSFC) using funding provided by the NASA Earth Observing System. tn addition to the funding provided by NASA EOS, the NASA CERES Ground Validation Group supplied four MPL systems to the project, and the NASA TOMS group contributed their MPL for work at GSFC. The Atmospheric Radiation Measurement Program (ARM) also agreed to make their data available to the MPL-Net project for processing. In addition to the initial NASA and ARM operated sites, several other independent research groups have also expressed interest in joining the network using their own instruments. Finally, a limited amount of EOS funding was set aside to participate in various field experiments each year. The NASA Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) project also provides funds to deploy their MPL during ocean research cruises. All together, the MPL-Net project has participated in four major field experiments since 2000. Most MPL-Net sites and field experiment locations are also co-located with sunphotometers in the NASA Aerosol Robotic Network. (AERONET). Therefore, at these locations data is collected on both aerosol and cloud vertical structure as well as column optical depth and sky radiance. Real-time data products are now available from most MPL-Net sites. Our real-time products are generated at times of AERONET aerosol optical depth (AOD) measurements. The AERONET AOD is used as input to our

  11. MPL-Net Measurements of Aerosol and Cloud Vertical Distributions at Co-Located AERONET Sites

    NASA Technical Reports Server (NTRS)

    Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Tsay, Si-Chee; Holben, Brent; Starr, David OC. (Technical Monitor)

    2002-01-01

    In the early 1990s, the first small, eye-safe, and autonomous lidar system was developed, the Micropulse Lidar (MPL). The MPL acquires signal profiles of backscattered laser light from aerosols and clouds. The signals are analyzed to yield multiple layer heights, optical depths of each layer, average extinction-to-backscatter ratios for each layer, and profiles of extinction in each layer. In 2000, several MPL sites were organized into a coordinated network, called MPL-Net, by the Cloud and Aerosol Lidar Group at NASA Goddard Space Flight Center (GSFC) using funding provided by the NASA Earth Observing System. tn addition to the funding provided by NASA EOS, the NASA CERES Ground Validation Group supplied four MPL systems to the project, and the NASA TOMS group contributed their MPL for work at GSFC. The Atmospheric Radiation Measurement Program (ARM) also agreed to make their data available to the MPL-Net project for processing. In addition to the initial NASA and ARM operated sites, several other independent research groups have also expressed interest in joining the network using their own instruments. Finally, a limited amount of EOS funding was set aside to participate in various field experiments each year. The NASA Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) project also provides funds to deploy their MPL during ocean research cruises. All together, the MPL-Net project has participated in four major field experiments since 2000. Most MPL-Net sites and field experiment locations are also co-located with sunphotometers in the NASA Aerosol Robotic Network. (AERONET). Therefore, at these locations data is collected on both aerosol and cloud vertical structure as well as column optical depth and sky radiance. Real-time data products are now available from most MPL-Net sites. Our real-time products are generated at times of AERONET aerosol optical depth (AOD) measurements. The AERONET AOD is used as input to our

  12. Records for the number of distinct sites visited by a random walk on the fully connected lattice

    NASA Astrophysics Data System (ADS)

    Turban, Loïc

    2015-11-01

    We consider a random walk on the fully connected lattice with N sites and study the time evolution of the number of distinct sites s visited by the walker on a subset with n sites. A record value v is obtained for s at a record time t when the walker visits a site of the subset for the first time. The record time t is a partial covering time when v\\lt n and a total covering time when v = n. The probability distributions for the number of records s, the record value v and the record (covering) time t, involving r-Stirling numbers, are obtained using generating function techniques. The mean values, variances and skewnesses are deduced from the generating functions. In the scaling limit the probability distributions for s and v lead to the same Gaussian density. The fluctuations of the record time t are also Gaussian at partial covering, when n-v={{O}}(n). They are distributed according to the type-I Gumbel extreme-value distribution at total covering, when v = n. A discrete sequence of generalized Gumbel distributions, indexed by n-v, is obtained at almost total covering, when n-v={{O}}(1). These generalized Gumbel distributions are crossing over to the Gaussian distribution when n - v increases.

  13. Fine structure of the spectra of the Kondo lattice model: Two-site cellular dynamical mean-field theory study

    NASA Astrophysics Data System (ADS)

    Osolin, Žiga; Žitko, Rok

    2017-01-01

    We study the antiferromagnetic and paramagnetic Kondo insulator phases of the Kondo lattice model on the cubic lattice at half filling using the cellular dynamical mean-field theory (CDMFT) with the numerical renormalization group (NRG) as the impurity solver, focusing on the fine details of the spectral function and self-energy. We find that the nonlocal correlations increase the gap in both the antiferromagnetic and Kondo insulator phases and shrink the extent of the antiferromagnetic phase in the phase diagram but do not alter any properties qualitatively. The agreement between the numerical CDMFT results and those within a simple hybridization picture, which adequately describes the overall band structure of the system but neglects all effects on the inelastic-scattering processes, is similar to that of the single-site DMFT results; there are deviations that are responsible for the additional fine structure, in particular for the asymmetric spectral resonances or dips that become more pronounced in the strong-coupling regime close to the antiferromagnet-paramagnetic quantum phase transition. These features appear broader in the CDMFT mostly due to numerical artifacts linked to more aggressive state truncation required in the NRG.

  14. Two-Dimensional Pnictogen Honeycomb Lattice: Structure, On-Site Spin-Orbit Coupling and Spin Polarization

    PubMed Central

    Lee, Jason; Tian, Wen-Chuan; Wang, Wei-Liang; Yao, Dao-Xin

    2015-01-01

    Because of its novel physical properties, two-dimensional materials have attracted great attention. From first-principle calculations and vibration frequencies analysis, we predict a new family of two-dimensional materials based on the idea of octet stability: honeycomb lattices of pnictogens (N, P, As, Sb, Bi). The buckled structures of materials come from the sp3 hybridization. These materials have indirect band gap ranging from 0.43 eV to 3.7 eV. From the analysis of projected density of states, we argue that the s and p orbitals together are sufficient to describe the electronic structure under tight-binding model, and the tight-binding parameters are obtained by fitting the band structures to first-principle results. Surprisingly large on-site spin-orbit coupling is found for all the pnictogen lattices except nitrogen. Investigation on the electronic structures of both zigzag and armchair nanoribbons reveals the possible existence of spin-polarized ferromagnetic edge states in some cases, which are rare in one-dimensional systems. These edge states and magnetism may exist under the condition of high vacuum and low temperature. This new family of materials would have promising applications in electronics, optics, sensors, and solar cells. PMID:26122870

  15. Effects of suture site or penetration depth on anchor location in all-inside meniscal repair.

    PubMed

    Uchida, Ryohei; Mae, Tatsuo; Hiramatsu, Kunihiko; Iuchi, Ryo; Kinugasa, Kazutaka; Shino, Konsei; Yoshikawa, Hideki; Nakata, Ken

    2016-12-01

    To evaluate the effects of suture site or penetration depth on anchor location in all-inside meniscal repair. Eight fresh-frozen cadaveric knees were evaluated after meniscal repair using eight FasT-Fix360 (FF360) devices (Smith & Nephew Endoscopy, Andover, MA) (16 anchors) for each knee. The penetration depth was 14mm, the distance same from the periphery to insertion point, in four knees (Group A) and that in the remaining four knees (Group B) was 18mm. The anchor location in two groups was evaluated after attentive dissection. Of 32 anchors for the medial meniscus, 94% were on the capsule, including the superficial medial collateral ligament (sMCL) in both groups. For the lateral meniscus, 47% anchors in Group A and 44% anchors in Group B were on the capsule. Total three anchors were over the lateral collateral ligament (LCL), whereas 15 anchors were behind the popliteus tendon (POP). Although all three anchors settled in the subcutaneous fat were in Group B, no significant difference was observed in anchor location between two groups. Secure fixation to thin membranous tissue can be achieved for the medial meniscal repair using FF360, while some were located in/on bunchy LCL or POP in lateral meniscal repair. Only anchors with additional four-millimeter penetration depth were in the subcutaneous fat, although there was no effect of the penetration depth to anchor location. Clinically, for lateral meniscal repair, penetrating toward POP/LCL should be avoided and four-millimeter deeper penetration depth might be a risk for the subcutaneous irritation. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. Performance analysis of high frequency single-site-location antenna arrays using numerical electromagnetic modeling

    NASA Astrophysics Data System (ADS)

    Schiantarelli, Harry T.

    1990-09-01

    Electronic support measures (ESM) systems play an increasingly important role in modern warfare and can influence the outcome of a military engagement. The application of ESM can be extended to anti-guerrilla and anti-drug operations where law enforcement agencies can exploit the fact that their presence is inducing the outlaw to depend more on radio communications to coordinate their activities. When a propagation path of no more than one reflection at the ionosphere (1-hop) can be assumed, position of an HF emitter can be determined by a single observing site using vertical triangulation, provided that the height of the ionosphere at the point where the radio wave is reflected, can be determined. This technique is known as high frequency direction finding single-site-location (HFDF SSL). This thesis analyzes the HFDF SSL error in measuring the direction of arrival of the signal, how this error is generated by the antenna array and its effect on emitter location. The characteristics of the two antenna arrays used by a specific HFDF SSL system that implements the phase-interferometer techniques were studied using electromagnetic modeling.

  17. Spatial patterns of serial murder: an analysis of disposal site location choice.

    PubMed

    Lundrigan, S; Canter, D

    2001-01-01

    Although the murders committed by serial killers may not be considered rational, there is growing evidence that the locations in which they commit their crimes may be guided by an implicit, if limited rationality. The hypothesized logic of disposal site choice of serial killers led to predictions that (a) their criminal domains would be around their home base and relate to familiar travel distances, (b) they would have a size that was characteristic of each offender, (c) the distribution would be biased towards other non-criminal activities, and (d) the size of the domains would increase over time. Examination of the geographical distribution of the sites at which 126 US and 29 UK serial killers disposed of their victims' bodies supported all four hypotheses. It was found that rational choice and routine activity models of criminal behavior could explain the spatial choices of serial murderers. It was concluded that the locations at which serial killers dispose of their victims' bodies reflect the inherent logic of the choices that underlie their predatory activities. Copyright 2001 John Wiley & Sons, Ltd.

  18. The location of sites and effect of semiconductor diode transscleral cyclophotocoagulation on the buphthalmic equine globe

    PubMed Central

    Gemensky-Metzler, Anne J.; Wilkie, David A.; Weisbrode, Steven E.; Kuhn, Sonia E.

    2014-01-01

    Purpose To determine appropriate location and energy settings for transscleral cyclophotocoagulation (TSCPC) for buphthalmic equine globes. Animals Eleven horses with a buphthalmic eye blinded by glaucoma presented for enucleation. Methods Globe and corneal dimensions were measured via ultrasonography and calipers and TSCPC was performed under general anesthesia immediately prior to enucleation. Part 1: In 9 globes, sixty sites were lasered 4 mm posterior to the limbus in the dorsotemporal and ventrotemporal quadrants at settings of 1500 milliwatts and 1500 milliseconds. Globes were processed and sectioned sagitally over the temporal aspect in two blocks, each with 5 histologic sections examined by light microscopy. A digital imaging system was used to determine the location and length of the pars plicata on one slide from each block. Part 2: Based on results in Part 1, two globes were measured and lasered using the same time and energy settings at the following distances posterior to the limbus: 8 mm dorsally, 6 mm dorsotemporally, 5 mm ventrotemporally, 5 mm ventrally. Results Globe and corneal dimensions exceeded normal values in all globes. Part 1: In all 9 globes photocoagulation affected the anterior ciliary processes and iris base and in 8/9 coagulation of the pectinate ligaments was noted. Part 2: In both globes, coagulation was confined to the pars plicata. Conclusions The previously recommended TSCPC sites are located too far anteriorly for a buphthalmic globe. Buphthalmic equine globes should have TSCPC performed at the following distances posterior to the limbus: 6-8 mm dorsally, 5-6 mm dorsotemporally, 4-5 mm ventrotemporally and 4-5 mm ventrally. PMID:24697980

  19. Superfluidity of fermions with repulsive on-site interaction in an anisotropic optical lattice near a Feshbach resonance

    NASA Astrophysics Data System (ADS)

    Wang, Bin; Duan, Luming

    2008-03-01

    We present numerical analysis of ground state properties of the one-dimensional general Hubbard model (GHM) with particle assisted tunnelling rates and repulsive on-site interaction (positive-U), which describes fermionic atoms in an anisotropic optical lattice near a wide Feshbach resonance. Our calculation uses the time evolving block decimation algorithm, which is an extension of the density matrix renormalization group and provides a well controlled method for one-dimensional systems. We show that the positive-U GHM, when hole doped from half-filling, shows up a phase with coexistence of quasi-long-range superfluid and charge-density-wave orders. This feature is different from the property of the conventional Hubbard model with positive-U, indicting the particle assisted tunneling in the GHM could bring in qualitatively new physics.

  20. Superfluidity of fermions with repulsive on-site interaction in an anisotropic optical lattice near a Feshbach resonance

    NASA Astrophysics Data System (ADS)

    Wang, B.; Duan, L.-M.

    2008-07-01

    We present a numerical study on ground state properties of a one-dimensional (1D) general Hubbard model (GHM) with particle-assisted tunnelling rates and repulsive on-site interaction (positive-U), which describes fermionic atoms in an anisotropic optical lattice near a wide Feshbach resonance. For our calculation, we utilize the time evolving block decimation (TEBD) algorithm, which is an extension of the density matrix renormalization group and provides a well-controlled method for 1D systems. We show that the positive-U GHM, when hole-doped from half-filling, exhibits a phase with coexistence of quasi-long-range superfluid and charge-density-wave orders. This feature is different from the property of the conventional Hubbard model with positive-U, indicating the particle-assisted tunnelling mechanism in GHM brings in qualitatively new physics.

  1. Quasiparticle Scattering in the Rashba Semiconductor BiTeBr: The Roles of Spin and Defect Lattice Site.

    PubMed

    Butler, Christopher John; Yang, Po-Ya; Sankar, Raman; Lien, Yen-Neng; Lu, Chun-I; Chang, Luo-Yueh; Chen, Chia-Hao; Wei, Ching-Ming; Chou, Fang-Cheng; Lin, Minn-Tsong

    2016-09-28

    Observations of quasiparticle interference have been used in recent years to examine exotic carrier behavior at the surfaces of emergent materials, connecting carrier dispersion and scattering dynamics to real-space features with atomic resolution. We observe quasiparticle interference in the strongly Rashba split 2DEG-like surface band found at the tellurium termination of BiTeBr and examine two mechanisms governing quasiparticle scattering: We confirm the suppression of spin-flip scattering by comparing measured quasiparticle interference with a spin-dependent elastic scattering model applied to the calculated spectral function. We also use atomically resolved STM maps to identify point defect lattice sites and spectro-microscopy imaging to discern their varying scattering strengths, which we understand in terms of the calculated orbital characteristics of the surface band. Defects on the Bi sublattice cause the strongest scattering of the predominantly Bi 6p derived surface band, with other defects causing nearly no scattering near the conduction band minimum.

  2. Superstable cycles for antiferromagnetic Q-state Potts and three-site interaction Ising models on recursive lattices

    NASA Astrophysics Data System (ADS)

    Ananikian, N.; Artuso, R.; Chakhmakhchyan, L.

    2014-10-01

    We consider the superstable cycles of the Q-state Potts (QSP) and the three-site interaction antiferromagnetic Ising (TSAI) models on recursive lattices. The rational mappings describing the models’ statistical properties are obtained via the recurrence relation technique. We provide analytical solutions for the superstable cycles of the second order for both models. A particular attention is devoted to the period three window. Here we present an exact result for the third order superstable orbit for the QSP and a numerical solution for the TSAI model. Additionally, we point out a non-trivial connection between bifurcations and superstability: in some regions of parameters a superstable cycle is not followed by a doubling bifurcation. Furthermore, we use symbolic dynamics to understand the changes taking place at points of superstability and to distinguish areas between two consecutive superstable orbits.

  3. 77 FR 70449 - Medical Device User Fee and Modernization Act; Notice to Public of Web Site Location of Fiscal...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-26

    ... Public of Web Site Location of Fiscal Year 2013 Proposed Guidance Development AGENCY: Food and Drug Administration, HHS. ACTION: Notice. SUMMARY: The Food and Drug Administration (FDA) is announcing the Web site... device guidance documents, FDA has committed to updating its Web site in a timely manner to reflect the...

  4. Iodine-129 in forage and deer on the Hanford site and other Pacific Northwest locations

    SciTech Connect

    Price, K.R.; Cadwell, L.L.; Schreckhise, R.G.; Brauer, F.P.

    1981-02-01

    Samples of surface soil, litter, forage, and deer (rumen content, muscle, liver, and thyroid gland) were collected from Bend, Oregon; Centralia, Washington; Wenatchee, Washington; the Wooten Game Range near Dayton, Washington; and on or near the Hanford Site, Richland, Washington. The concentrations of /sup 129/I and /sup 127/I were determined using neturon activation techniques. The purpose of the study was to establish the current levels of /sup 129/I in the environs of the Hanford Site prior to the proposed restart of fuel reprocessing at the PUREX plant. The results of this study clearly demonstrated the longevity of /sup 129/I in the biosphere following gaseous release from a nuclear facility. Analyses of thyroid glands showed that deer living within 160 km (Wooten Game Range) of Hanford had elevated levels of /sup 129/I when compared to the more distant Pacific Northwest locations (Centralia, or Bend). Levels of /sup 129/I in deer thyroid from Bend, or Centralia, (15 fCi/g wet weight), were about five times higher than values reported for the central United States, while, Hanford samples were about 2,700 times higher. The average concentration of /sup 129/I in deer thyroids collected at Hanford in 1978 was similar to samples collected 14 years earlier. The concentrations of /sup 129/I in soil, litter, forage, and other deer samples generally decrease in the order: Hanford > Wooten > Wenatchee > Centralia approx. = Bend. This corresponds to an increase in distance from the Hanford Site.

  5. Temperature-dependent thermal conductivities of one-dimensional nonlinear Klein-Gordon lattices with a soft on-site potential.

    PubMed

    Yang, Linlin; Li, Nianbei; Li, Baowen

    2014-12-01

    The temperature-dependent thermal conductivities of one-dimensional nonlinear Klein-Gordon lattices with soft on-site potential (soft-KG) are investigated systematically. Similarly to the previously studied hard-KG lattices, the existence of renormalized phonons is also confirmed in soft-KG lattices. In particular, the temperature dependence of the renormalized phonon frequency predicted by a classical field theory is verified by detailed numerical simulations. However, the thermal conductivities of soft-KG lattices exhibit the opposite trend in temperature dependence in comparison with those of hard-KG lattices. The interesting thing is that the temperature-dependent thermal conductivities of both soft- and hard-KG lattices can be interpreted in the same framework of effective phonon theory. According to the effective phonon theory, the exponents of the power-law dependence of the thermal conductivities as a function of temperature are only determined by the exponents of the soft or hard on-site potentials. These theoretical predictions are consistently verified very well by extensive numerical simulations.

  6. On the development of a model predicting the recrystallization texture of aluminum using the Taylor model for rolling textures and the coincidence lattice site theory

    NASA Astrophysics Data System (ADS)

    T, Morimoto; F, Yoshida; A, Yanagida; J, Yanagimoto

    2015-04-01

    First, hardening model in f.c.c. metals was formulated with collinear interactions slips, Hirth slips and Lomer-Cottrell slips. Using the Taylor and the Sachs rolling texture prediction model, the residual dislocation densities of cold-rolled commercial pure aluminum were estimated. Then, coincidence site lattice grains were investigated from observed cold rolling texture. Finally, on the basis of oriented nucleation theory and coincidence site lattice theory, the recrystallization texture of commercial pure aluminum after low-temperature annealing was predicted.

  7. The location of phosphorylation sites and Ca2+-dependent proteolytic cleavage sites on the major neurofilament polypeptides from Myxicola infundibulum.

    PubMed Central

    Eagles, P A; Gilbert, D S; Maggs, A

    1981-01-01

    1. When axoplasm is incubated with [32P]Pi the main phosphorylated components are the neurofilament polypeptides. 2. Activation with Ca2+ of the proteinase present in axoplasm causes degradation of these neurofilaments and the peptides produced by this reaction have been analysed by fingerprinting. 3. Fingerprinting shows that initially the Ca2+-activated proteinase cleaves the neurofilament polypeptides at three major sites producing polypeptides with mol.wts. 70,000, 50,000 and 47,000. 4. These polypeptides sediment with filaments, originate from the tail-region of the molecule and contain a little radioactive label. 5. As these polypeptides are produced, other polypeptides that come from the head-region of the molecule are liberated as soluble products that contain the bulk of the radioactivity. 6. Fingerprinting therefore shows that at least two regions on the molecule are phosphorylated and that the major one is located towards the head-end of the polypeptides. Images Fig. 1. Fig. 2. Fig. 3. Fig. 4. Fig. 5. Fig. 6. Fig. 7. PMID:7039615

  8. A stochastic method for optimal location of groundwater monitoring sites at aquifer scale

    NASA Astrophysics Data System (ADS)

    Barca, E.; Passarella, G.

    2009-04-01

    With the growth of public environmental awareness and the improvement in national and EU legislation regarding the environment, monitoring assumed great importance in the frame of all managerial activities related to territories. In particular, recently, a number of public environmental agencies have invested great resources in planning and operating improvements on existing monitoring networks within their regions. In this framework, and, at the light of the Water Framework Directive, the optimal monitoring of the qualitative and quantitative state of groundwater becomes a priority, particularly, when severe economic constraints must be imposed and the territory to be monitored is quite wide. There are a lot of reasons justifying the optimal extension of a monitoring network. In fact, a modest coverage of the monitored area often makes impossible to provide the manager with a sufficient knowledge for decision-making processes. In general, monitoring networks are characterized by a scarce number of existing wells, irregularly spread over the considered area. This is a typical case of optimization and it may be solved seeking among existing, but unused, wells, all and only those able to make the monitoring network coverage, the most uniform among any arrangement. Using existing wells as new monitoring sites, allows one to drastically reduce the needed budget. In this paper, a four step method, based on simulated annealing, has been implemented with the aim of identifying scarcely monitored zones within the groundwater system boundaries. The steps are the following: I. Define aquifer boundaries, number and location of the existing monitoring sites and number and location of candidate new monitoring sites. Any constraint about the network size, and wells' location and characteristics need also to be identified at this step; II. Carry out stochastic simulations producing a large number of possible realizations of the improved monitoring network and choose the transient

  9. Preliminary geohydrologic site characterization and proposed water quality well locations for WAG 4, WAG 5, WAG 3, and SWSA 1

    SciTech Connect

    Baughn, D.C.

    1987-03-01

    The purpose of this report is to assess general site conditions and to recommend water quality well locations at Waste Area Groupings (WAGs) 4, 5 and 3 and Solid Waste Storage Area 1 (SWSA 1) within the Oak Ridge National Laboratory (ORNL) complex. The subject sites are identified on the general site location map. For reference, the relationship of the subject sites to other WAGs are shown. WAGs are regions prescribed by Martin Marietta throughout the ORNL complex that require environmental assessment which will include design and installation of ground water monitoring systems. WAGs contain solid waste management units such as SWSAs, as well as pipelines, spill sites, buildings, ponds and experimental test sites. These solid waste management units are considered to be potential sources of contamination requiring further evaluation. This report recommends locations for water quality wells which will be installed at WAG boundaries in order to gather water quality data.

  10. Selected stratigraphic data for drill holes located in Frenchman Flat, Nevada Test Site. Rev. 1

    SciTech Connect

    Drellack, S.L. Jr.

    1997-02-01

    Stratigraphic data are presented in tabular form for 72 holes drilled in Frenchman Flat, Nevada Test Site, between 1950 and 1993. Three pairs of data presentations are included for each hole: depth to formation tops, formation thicknesses, and formation elevations are presented in both field (English) and metric units. Also included for each hole, where available, are various construction data (hole depth, hole diameter, surface location coordinates) and certain information of hydrogeologic significance (depth to water level, top of zeolitization). The event name is given for holes associated with a particular nuclear test. An extensive set of footnotes is included, which indicates data sources and provides other information. The body of the report describes the stratigraphic setting of Frenchman Flat, gives drill-hole naming conventions and database terminology, and provides other background and reference material.

  11. Spin models for two-site resonant tunnelling dynamics of bosons in a tilted optical lattice

    NASA Astrophysics Data System (ADS)

    Buyskikh, Anton; Pekker, David; Daley, Andrew

    2016-05-01

    We study the non-equilibrium dynamics of a one dimensional tilted Bose-Hubbard model, beginning from unit filling in the Mott insulator regime. Studying a quench to the resonance point for tunnelling of the particles over two sites, we show how in the presence of a superlattice, a spin model emerges involving two subchains described by an Ising model that are then coupled by interaction terms. Using this model, we study the behaviour of the system near the quantum critical point in the vicinity of the tunnelling resonance, especially looking at the out-of-equilibrium dynamics after the quench. We compare the dephasing of local observables corresponding to the number of doubly occupied sites, which were measured in recent experiments, to the dynamics expected in the presence of noise and decoherence. These results should be directly measurable in experiments, and provide a diagnostic tool for investigating decoherence in such out-of-equilibrium dynamics.

  12. Location of femoral artery puncture site and the risk of postcatheterization pseudoaneurysm formation.

    PubMed

    Gabriel, Marcin; Pawlaczyk, Katarzyna; Waliszewski, Krzysztof; Krasiński, Zbigniew; Majewski, Wacław

    2007-08-21

    Iatrogenic causes constitute increasingly frequent sources of pseudoaneurysms due to endovascular interventions. However, till now, all analyses focused on evaluating different risk factors contributing to the development of pseudoaneurysm, overlooking the issue of localization of femoral puncture. The aim of this study was to assess the influence of position of femoral artery puncture on the risk of pseudoaneurysm formation. 116 patients were evaluated for the site of catheter insertion into femoral arteries. Another group of 273 patients, suspected of vascular complications after endovascular procedures, were diagnosed with pseudoaneurysms which were analyzed for the location of arterial wall disruption. Puncture sites of groin arteries, i.e. EIA (2.7%), CFA (77.5%), SFA and DFA (19.8%), correlated with pseudoaneurysm location reaching 7.6% (EIA), 54.3% (CFA) and 38.1% (SFA, DFA). Type of procedure influenced these values. Duplex ultrasound mapping of CFA before the endovascular intervention eliminated discrepancies between the incidence of pseudoaneurysm formation and the frequency of arterial puncture in the selected vascular segments. Pseudoaneurysms formed in 4.5% of patients undergoing traditional palpation-guided vessel cannulation and in 2.6% of patients after ultrasound-guided puncture of the femoral artery. Upon further analysis, we concluded that the likelihood of the development of pseudoaneurysm depends on the artery punctured in the groin. This risk increases dramatically for external iliac artery, superficial and deep femoral arteries. A simple means of prevention of this dangerous complication of femoral artery puncture is duplex ultrasound mapping of the groin arteries.

  13. Intrasite motions and monument instabilities at Medicina ITRF co-location site

    NASA Astrophysics Data System (ADS)

    Sarti, Pierguido; Abbondanza, Claudio; Legrand, Juliette; Bruyninx, Carine; Vittuari, Luca; Ray, Jim

    2013-03-01

    We process the total-station surveys performed at the ITRF co-location site Medicina (Northern Italy) over the decade (2001-2010) with the purpose of determining the extent of local intrasite motions and relating them to local geophysical processes, the geological setting and the design of the ground pillars. In addition, continuous observations acquired by two co-located GPS stations (MEDI and MSEL separated by ≈27 m) are analysed and their relative motion is cross-checked with the total-station results. The local ground control network extends over a small area (<100 × 100 m) but the results demonstrate significant anisotropic deformations with rates up to 1.6 mm a-1, primarily horizontal, a value comparable to intraplate tectonic deformations. The results derived from GPS and total-station observations are consistent and point to the presence of horizontal intrasite motions over very short distances possibly associated with varying environmental conditions in a very unfavourable local geological setting and unsuitable monument design, these latter being crucial aspects of the realization and maintenance of global permanent geodetic networks and the global terrestrial reference frame.

  14. Locating the binding sites of antioxidants resveratrol, genistein and curcumin with tRNA.

    PubMed

    N'soukpoé-Kossi, C N; Bourassa, P; Mandeville, J S; Bekale, L; Bariyanga, J; Tajmir-Riahi, H A

    2015-09-01

    We located the binding sites of antioxidants resveratrol, genistein and curcumin on tRNA in aqueous solution at physiological conditions using constant tRNA concentration and various polyphenol contents. FTIR, UV-visible, CD spectroscopic methods and molecular modeling were used to determine polyphenol binding sites, the binding constant and the effects of polyphenol complexation on tRNA conformation and particle formation. Structural analysis showed that polyphenols bind tRNA via G-C and A-U base pairs through hydrophilic, hydrophobic and H-bonding contacts with overall binding constants of K(res-tRNA)=8.95(±0.80)×10(3) M(-1), K(gen-tRNA)=3.07(±0.5)×10(3) M(-1) and K(cur-tRNA)=1.55(±0.3)×10(4) M(-1). Molecular modeling showed the participation of several nucleobases in polyphenol-tRNA adduct formation with free binding energy of -4.43 for resveratrol, -4.26 kcal/mol for genistein and -4.84 kcal/mol for curcumin, indicating that the interaction process is spontaneous at room temperature. While tRNA remains in A-family structure, major biopolymer aggregation and particle formation occurred at high polyphenol contents.

  15. Locating the binding sites of folic acid with milk α- and β-caseins.

    PubMed

    Bourassa, P; Tajmir-Riahi, H A

    2012-01-12

    We located the binding sites of folic acid with milk α- and β-caseins at physiological conditions, using constant protein concentration and various folic acid contents. FTIR, UV-visible, and fluorescence spectroscopic methods as well as molecular modeling were used to analyze folic acid binding sites, the binding constant, and the effect of folic acid interaction on the stability and conformation of caseins. Structural analysis showed that folic acid binds caseins via both hydrophilic and hydrophobic contacts with overall binding constants of K(folic acid-α-caseins) = 4.8 (±0.6) × 10(4) M(-1) and K(folic acid-β-caseins) = 7.0 (±0.9) × 10(4) M(-1). The number of bound acid molecules per protein was 1.5 (±0.4) for α-casein and 1.4 (±0.3) for β-casein complexes. Molecular modeling showed different binding sites for folic acid on α- and β-caseins. The participation of several amino acids in folic acid-protein complexes was observed, which was stabilized by hydrogen bonding network and the free binding energy of -7.7 kcal/mol (acid-α-casein) and -8.1 kcal/mol (acid-β-casein). Folic acid complexation altered protein secondary structure by the reduction of α-helix from 35% (free α-casein) to 33% (acid-complex) and 32% (free β-casein) to 26% (acid-complex) indicating a partial protein destabilization. Caseins might act as carriers for transportation of folic acid to target molecules.

  16. Location Capability and Site Characterization Installing a Borehole VBB Seismometer: the OGS Experience in Ferrara (Italy)

    NASA Astrophysics Data System (ADS)

    Pesaresi, D.; Barnaba, C.

    2014-12-01

    The Centro di Ricerche Sismologiche (CRS, Seismological Research Centre) of the Istituto Nazionale di Oceanografia e di Geofisica Sperimentale (OGS, Italian National Institute for Oceanography and Experimental Geophysics) in Udine (Italy) after the strong earthquake of magnitude M=6.4 occurred in 1976 in the Italian Friuli-Venezia Giulia region, started to operate the Northeastern Italy Seismic Network: it currently consists of 19 very sensitive broad band and 17 simpler short period seismic stations, all telemetered to and acquired in real time at the OGS CRS data centre in Udine. The southwestern edge of the OGS seismic network stands on the Po alluvial basin: earthquake localization and characterization in this area is affected by the presence of soft alluvial deposits. Following the ML=5.9 earthquake that struck the Emilia region around Ferrara in Northern Italy on May 20, 2012, a cooperation of Istituto Nazionale di Geofisica e Vulcanologia, OGS, the Comune di Ferrara and the University of Ferrara lead to the reinstallation of a previously existing very broad band (VBB) borehole seismic station in Ferrara and to the deployment of a temporary seismographic network consisting of eight portable seismological stations, to record the local earthquakes that occurred during the seismic sequence. The aim of the OGS intervention was on one hand to extend its real time seismic monitoring capabilities toward South-West, including Ferrara and its surroundings, and on the other hand to evaluate seismic site responses in the area. We will introduce details of the Ferrara VBB borehole station and the OGS temporary seismographic network configuration and installation. We will then illustrate the location capability performances, and finally we will shortly describe seismic site characterization with surface/borehole comparisons in terms of seismic noise, site amplification and resonance frequencies.

  17. Use of Loran-C navigation system to accurately determine sampling site location in an above ground cooling reservoir

    SciTech Connect

    Lockwood, R.E.; Blankinship, D.R.

    1994-12-31

    Environmental monitoring programs often require accurate determination of sampling site locations in aquatic environments. This is especially true when a {open_quotes}picture{close_quotes} of high resolution is needed for observing a changing variable in a given area and location is assumed to be important to the distribution of that variable. Sample site location can be difficult if few visible land marks are available for reference on a large body of water. The use of navigational systems such as Global Positioning System (GPS) and its predecessor, Loran-C, provide an excellent method for sample site location. McFarland (1992) discusses the practicality of GPS for location determination. This article discusses the use of Loran-C in a sampling scheme implemented at the South Texas Project Electrical Generating Station (STPEGS), Wadsworth, Texas.

  18. Identification of sites within the Palo Duro Basin. Volume 2. Palo Duro Location B. [Contains glossary, Swisher County site

    SciTech Connect

    Not Available

    1984-11-01

    This three-volume document narrows to two sites for continued investigations for potential nuclear waste repository sites in the Palo Duro Basin of the Texas Panhandle. Volume 1 narrows a site previously identified in Deaf Smith County, Texas; Volume 2 narrows a site previously identified in Swisher County, Texas; and Volume 3 contains responses to comments received regarding the drafts of Volumes 1 and 2 (BMI/ONWI-531). These volumes discuss the methodology and logic used as well as the results that narrowed these sites. Each of the 10 site performance criteria was divided into descriptors related to site performance characteristics. Each descriptor was evaluated by a systematic logic to determine if it could be used as a discriminator. Then more- and less-preferred areas for groups of discriminators were defined and composite maps were prepared and evaluated to identify the sites.

  19. Identification of sites within the Palo Duro Basin. Volume 1. Palo Duro Location A. [Contains glossary, Deaf Smith site

    SciTech Connect

    Not Available

    1984-11-01

    This three-volume document narrows to two sites for continued investigations for potential nuclear waste repository sites in the Palo Duro Basin of the Texas Panhandle. Volume 1 narrows a site previously identified in Deaf Smith County, Texas; Volume 2 narrows a site previously identified in Swisher County, Texas; and Volume 3 contains responses to comments received regarding the drafts of Volumes 1 and 2 (BMI/ONWI-531). These volumes discuss the methodology and logic used as well as the results that narrowed these sites. Each of the 10 site performance criteria was divided into descriptors related to site performance characteristics. Each descriptor was evaluated by a systematic logic to determine if it could be used as a discriminator. Then more- and less-preferred areas for groups of discriminators were defined and composite maps were prepared and evaluated to identify the sites.

  20. A vinculin-containing cortical lattice in skeletal muscle: transverse lattice elements ("costameres") mark sites of attachment between myofibrils and sarcolemma.

    PubMed

    Pardo, J V; Siliciano, J D; Craig, S W

    1983-02-01

    We have found that vinculin is localized at the sarcolemma of skeletal muscle cells in a two-dimensional orthogonal lattice. Perpendicular to the longitudinal axis of the cell, bands of vinculin encircle the muscle cell and repeat along its length with a periodicity corresponding to the subjacent sarcomeres. Because of their appearance and probable function, we call the transverse elements of the lattice "costameres" (Latin costa, rib; Greek meros, part). Costameres have a substructure consisting of densely clustered patches of vinculin; the patches are segregated into two rows which flank the Z line and overlie the I band of the underlying sarcomere. It is likely that the costameres are physically coupled to the underlying myofibrils because: (i) the costameres broaden and narrow in concert with the underlying I band in stretched and contracted muscle, and (ii) adjacent but misaligned myofibrils are mirrored by corresponding discontinuities in the overlying costameres. We hypothesize that the sarcolemmal lattice, detected because vinculin is one of its molecular components, integrates the contractile apparatus with the sarcolemma during lengthening and shortening of the muscle cells.

  1. Trapping of diffusing particles by clusters of absorbing disks on a reflecting wall with disk centers on sites of a square lattice

    NASA Astrophysics Data System (ADS)

    Berezhkovskii, Alexander M.; Dagdug, Leonardo; Vazquez, Marco-Vinicio; Lizunov, Vladimir A.; Zimmerberg, Joshua; Bezrukov, Sergey M.

    2013-02-01

    A simple approximate formula is derived for the rate constant that describes steady-state flux of diffusing particles through a cluster of perfectly absorbing disks on the otherwise reflecting flat wall, assuming that the disk centers occupy neighboring sites of a square lattice. A distinctive feature of trapping by a disk cluster is that disks located at the cluster periphery shield the disks in the center of the cluster. This competition of the disks for diffusing particles makes it impossible to find an exact analytical solution for the rate constant in the general case. To derive the approximate formula, we use a recently suggested approach [A. M. Berezhkovskii, L. Dagdug, V. A. Lizunov, J. Zimmerberg, and S. M. Bezrukov, J. Chem. Phys. 136, 211102 (2012)], 10.1063/1.4726015, which is based on the replacement of the disk cluster by an effective uniform partially absorbing spot. The formula shows how the rate constant depends on the size and shape of the cluster. To check the accuracy of the formula, we compare its predictions with the values of the rate constant obtained from Brownian dynamics simulations. The comparison made for 18 clusters of various shapes and sizes shows good agreement between the theoretical predictions and numerical results.

  2. Optimal Locations for Siting Wind Energy Projects: Technical Challenges, Economics, and Public Preferences

    NASA Astrophysics Data System (ADS)

    Lamy, Julian V.

    Increasing the percentage of wind power in the United States electricity generation mix would facilitate the transition towards a more sustainable, low-pollution, and environmentally-conscious electricity grid. However, this effort is not without cost. Wind power generation is time-variable and typically not synchronized with electricity demand (i.e., load). In addition, the highest-output wind resources are often located in remote locations, necessitating transmission investment between generation sites and load. Furthermore, negative public perceptions of wind projects could prevent widespread wind development, especially for projects close to densely-populated communities. The work presented in my dissertation seeks to understand where it's best to locate wind energy projects while considering these various factors. First, in Chapter 2, I examine whether energy storage technologies, such as grid-scale batteries, could help reduce the transmission upgrade costs incurred when siting wind projects in distant locations. For a case study of a hypothetical 200 MW wind project in North Dakota that delivers power to Illinois, I present an optimization model that estimates the optimal size of transmission and energy storage capacity that yields the lowest average cost of generation and transmission (/MWh). I find that for this application of storage to be economical, energy storage costs would have to be 100/kWh or lower, which is well below current costs for available technologies. I conclude that there are likely better ways to use energy storage than for accessing distant wind projects. Following from this work, in Chapter 3, I present an optimization model to estimate the economics of accessing high quality wind resources in remote areas to comply with renewable energy policy targets. I include temporal aspects of wind power (variability costs and correlation to market prices) as well as total wind power produced from different farms. I assess the goal of providing

  3. A method for locating potential tree-planting sites in urban areas: a case study of Los Angeles, USA

    Treesearch

    Chunxia Wua; Qingfu Xiaoa; Gregory E. McPherson

    2008-01-01

    A GIS-based method for locating potential tree-planting sites based on land cover data is introduced. Criteria were developed to identify locations that are spatially available for potential tree planting based on land cover, sufficient distance from impervious surfaces, a minimum amount of pervious surface, and no crown overlap with other trees. In an ArcGIS...

  4. 43 CFR 3838.11 - How do I locate and record mining claims or tunnel sites on SRHA lands?

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false How do I locate and record mining claims or tunnel sites on SRHA lands? 3838.11 Section 3838.11 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR LOCATING...

  5. 43 CFR 3838.11 - How do I locate and record mining claims or tunnel sites on SRHA lands?

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false How do I locate and record mining claims or tunnel sites on SRHA lands? 3838.11 Section 3838.11 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR LOCATING...

  6. 43 CFR 3838.11 - How do I locate and record mining claims or tunnel sites on SRHA lands?

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false How do I locate and record mining claims or tunnel sites on SRHA lands? 3838.11 Section 3838.11 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR LOCATING...

  7. 43 CFR 3838.11 - How do I locate and record mining claims or tunnel sites on SRHA lands?

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false How do I locate and record mining claims or tunnel sites on SRHA lands? 3838.11 Section 3838.11 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR LOCATING...

  8. Lattice-site-specific spin dynamics in double perovskite Sr2CoOsO6.

    PubMed

    Yan, Binghai; Paul, Avijit Kumar; Kanungo, Sudipta; Reehuis, Manfred; Hoser, Andreas; Többens, Daniel M; Schnelle, Walter; Williams, Robert C; Lancaster, Tom; Xiao, Fan; Möller, Johannes S; Blundell, Stephen J; Hayes, William; Felser, Claudia; Jansen, Martin

    2014-04-11

    Magnetic properties and spin dynamics have been studied for the structurally ordered double perovskite Sr2CoOsO6. Neutron diffraction, muon-spin relaxation, and ac-susceptibility measurements reveal two antiferromagnetic (AFM) phases on cooling from room temperature down to 2 K. In the first AFM phase, with transition temperature TN1=108  K, cobalt (3d7, S=3/2) and osmium (5d2, S=1) moments fluctuate dynamically, while their average effective moments undergo long-range order. In the second AFM phase below TN2=67  K, cobalt moments first become frozen and induce a noncollinear spin-canted AFM state, while dynamically fluctuating osmium moments are later frozen into a randomly canted state at T≈5  K. Ab initio calculations indicate that the effective exchange coupling between cobalt and osmium sites is rather weak, so that cobalt and osmium sublattices exhibit different ground states and spin dynamics, making Sr2CoOsO6 distinct from previously reported double-perovskite compounds.

  9. Breathing Pyrochlore Lattice Realized in the A-Site Ordered Spinel Oxides LiGaCr4O8 and LiInCr4O8

    NASA Astrophysics Data System (ADS)

    Okamoto, Yoshihiko

    2014-03-01

    A Cr spinel oxide ACr2O4 with a nonmagnetic A2+ ion at the tetrahedral site provides an interesting playground for studying magnetic frustration in a pyrochlore lattice made of Cr3+ ions with an S = 3/2 spin. We found a novel type of frustrated lattice called ``breathing'' pyrochlore lattice, which is made of Cr3+ ions in two A-site ordered spinel oxides, LiGaCr4O8 and LiInCr4O8. Because of the large size mismatch between Li+ and Ga3+/In3+ ions, they alternately occupy the tetrahedral sites so as to form a Zinc Blende lattice. This transforms the conventional pyrochlore lattice into an alternating array of small and large tetrahedra, while keeping their shapes regular. LiGaCr4O8, with a lesser degree of alternation, shows similar magnetic properties to the conventional Cr spinel oxides such as ZnCr2O4. In contrast, LiInCr4O8 shows a spin-gap behavior in its magnetic susceptibility caused by a large alternation of magnetic interaction in the more breathing pyrochlore lattice. This suggests that LiInCr4O8 exists in a proximity to an exotic singlet ground state based on a tetramer singlet formed in the smaller tetrahedron, although it finally goes to a magnetically ordered state below 13 K, which may be triggered by a structural transition. We will also present NMR and neutron scattering measurements carried out to elucidate the nature of these compounds, and our recent results on solid solutions between the two compounds.

  10. Pleomorphic adenoma of the lower lip: A rare site of location

    PubMed Central

    Sengul, Ilker; Sengul, Demet; Aribas, Duygu

    2011-01-01

    Context: Pleomorphic adenoma is the most common neoplasm of the minor salivary glands which are uncommon among the entire salivary gland tumors. The lower lip is a very rare site of occurrence for pleomorphic adenoma. We intended to present a case of pleomorphic adenoma of the lower lip. Case Report: A 49-year-old Turkish man presented with the painless mass on his lower lip. A total excision was choiced for the mass by both we and the patient because of some cosmetic reasons. The histopathological evaluation revealed the diagnosis of pleomorphic adenoma and neither complication nor recurrence was observed during a clinical follow-up for 40 months. Conclusions: A clinician should be vigilant for the possibility of existence of a pleomorphic adenoma located on the lower lip even it is rare. Once it is diagnosed concisely, a wide excision is suggested in general if there is no cosmetic care and no risk of damage to functional structures of head and neck. PMID:22540103

  11. A statistical approach for site error correction in lightning location networks with DF/TOA technique and its application results

    NASA Astrophysics Data System (ADS)

    Lu, Tao; Chen, Mingli; Du, Yaping; Qiu, Zongxu

    2017-02-01

    Lightning location network (LLN) with DF/TOA (direction-finder/time-of-arrival) combined technique has been widely used in the world. However, the accuracy of the lightning data from such LLNs has still been restricted by "site error", especially for those detected only by two DF/TOA sensors. In this paper we practice a statistical approach for evaluation and correction of "site error" for DF/TOA type LLN based on its lightning data. By comparing lightning locations recorded by at least 4 sensors between DF and TOA techniques, the spatial characteristics of "site error" for each sensor in the network can be obtained. The obtained "site error" then can be used to improve the accuracy of lightning locations especially those recorded by only 2 sensors. With this approach, the "site error" patterns for 23 sensors in Yunnan LLN are obtained. The features of these site error patterns are in good consistency with those in literature. Significant differences in lightning locations before and after "site error" corrections indicate that the proposed approach works effectively.

  12. New sites of Australasian microtektites in the central Indian Ocean: Implications for the location and size of source crater

    NASA Astrophysics Data System (ADS)

    Prasad, M. Shyam; Mahale, Vasudev P.; Kodagali, V. N.

    2007-06-01

    We have identified 15 new Australasian microtektite sites along a transect roughly N-S in the central Indian Ocean. These locations, in addition to the existing 46 sites, total to 61 microtektite sites in the oceans. We carried out regression analysis of a selected area between 12-26°N and 98-112°E, at 0.5° intervals using three microtektite data sets separately: 41 sites, 46 sites (number of sites known up to the years 1994 and 2006, respectively), and the entire data set of 61 sites. This area was chosen because, on the basis of various lines of evidence, several investigators suggested impact craters for the strewn field within this broad area. The 41 site data set defines an impact site at about 12°N and 106°E. Whereas the contours joining the highest values of the square of the correlation coefficient by using 46 site and 61 site data sets define an area located in NE Thailand-central Laos, the center of this site is at 18°N and 104°E. Therefore with progressive increase in microtektite data the location of the impact site seems to get defined more rigorously. On the basis of the equations for the concentration of the ejecta and the distance from the source region, the calculated crater size has a diameter range between 33 and 120 km. Interestingly, the lower size limit of 33 km has been found closer to ground truth by verification from the microtektite data of the Ivory Coast strewn field.

  13. Motif types, motif locations and base composition patterns around the RNA polyadenylation site in microorganisms, plants and animals

    PubMed Central

    2014-01-01

    Background The polyadenylation of RNA is critical for gene functioning, but the conserved sequence motifs (often called signal or signature motifs), motif locations and abundances, and base composition patterns around mRNA polyadenylation [poly(A)] sites are still uncharacterized in most species. The evolutionary tendency for poly(A) site selection is still largely unknown. Results We analyzed the poly(A) site regions of 31 species or phyla. Different groups of species showed different poly(A) signal motifs: UUACUU at the poly(A) site in the parasite Trypanosoma cruzi; UGUAAC (approximately 13 bases upstream of the site) in the alga Chlamydomonas reinhardtii; UGUUUG (or UGUUUGUU) at mainly the fourth base downstream of the poly(A) site in the parasite Blastocystis hominis; and AAUAAA at approximately 16 bases and approximately 19 bases upstream of the poly(A) site in animals and plants, respectively. Polyadenylation signal motifs are usually several hundred times more abundant around poly(A) sites than in whole genomes. These predominant motifs usually had very specific locations, whether upstream of, at, or downstream of poly(A) sites, depending on the species or phylum. The poly(A) site was usually an adenosine (A) in all analyzed species except for B. hominis, and there was weak A predominance in C. reinhardtii. Fungi, animals, plants, and the protist Phytophthora infestans shared a general base abundance pattern (or base composition pattern) of “U-rich—A-rich—U-rich—Poly(A) site—U-rich regions”, or U-A-U-A-U for short, with some variation for each kingdom or subkingdom. Conclusion This study identified the poly(A) signal motifs, motif locations, and base composition patterns around mRNA poly(A) sites in protists, fungi, plants, and animals and provided insight into poly(A) site evolution. PMID:25052519

  14. Approaching hydrate and free gas distribution at the SUGAR-Site location in the Danube Delta

    NASA Astrophysics Data System (ADS)

    Bialas, Joerg; Dannowski, Anke; Zander, Timo; Klaeschen, Dirk; Klaucke, Ingo

    2017-04-01

    Gas hydrates did receive a lot of attention over the last decades when investigating their potential to serve as a possible source for Methane production. Among other world-wide programs the German SUGAR project sets out to investigate the entire chain from exploitation to production in Europe. Therefore research in the scope of the SUGAR project sets out to investigate a site in European EEZ for the detailed studies of hydrate and gas distribution in a permeable sediment matrix. Among others one aim of the project is to provide in situ samples of natural methane hydrate for further investigations by MEBO drilling. The Danube paleo-delta with its ancient canyon and levee systems was chosen as a possible candidate for hydrate formation within the available drilling range of 200 m below seafloor. In order to decide on the best drilling location cruise MSM34 (Bialas et al., 2014) of the German RV MARIA S MERIAN set out to acquire geophysical, geological and geochemical datasets for assessment of the hydrate content within the Danube paleo-delta, Black Sea. The Black Sea is well known for a significant gas content in the sedimentary column. Reports on observations of bottom simulating reflectors (BSR) by Popescu et al. (2007) and others indicate that free gas and hydrate occurrence can be expected within the ancient passive channel levee systems. A variety of inverted reflection events within the gas hydrate stability zone (GHSZ) were observed within the drilling range of MEBO and chosen for further investigation. Here we report on combined seismic investigations of high-resolution 2D & 3D multichannel seismic (MCS) acquisition accompanied by four component Ocean-Bottom-Seismometer (OBS) observations. P- and converted S-wave arrivals within the OBS datasets were analysed to provide overall velocity depth models. Due to the limited length of profiles the majority of OBS events are caused by near vertical reflections. While P-wave events have a significant lateral

  15. A Brassica napus lipase locates at the membrane contact sites involved in chloroplast development.

    PubMed

    Tan, Xiaoli; Wang, Qiuye; Tian, Baoxia; Zhang, Henan; Lu, Daoli; Zhou, Jia

    2011-01-01

    Fatty acids synthesized in chloroplast are transported to endoplasmic reticulum (ER) for triacylglycerols (TAGs) resembling. The development of chloroplast also requires lipids trafficking from ER to chloroplast. The membrane contact sites (MCSs) between ER and chloroplast has been demonstrated to be involved for the trafficking of lipids and proteins. Lipids trafficking between ER and chloroplast is often accompanied by lipids interconversion. However, it is rarely known how lipids interconversion happens during their trafficking. We cloned a lipase gene from Brassica napus L., designated as BnCLIP1. Green fluorescence protein (GFP)-tagged BnCLIP1 was shown to locate at the MCSs between ER and chloroplasts in tobacco leaves. Heterogeneous expression of BnCLIP1 in Saccharomyces cerevisiae (pep4) reduced the total amount of fatty acid. Gas chromatography-mass spectrometry (GC-MS) analysis revealed that the truncated BnCLIP1 had a substrate preference for C16:0 lipids in Saccharomyces cerevisiae (pep4). To probe the physiological function of BnCLIP1, two Brassica napus lines with different oil-content were introduced to investigate the transcript patterns of BnCLIP1 during seed development. Intriguingly, the transcript level of BnCLIP1 was found to be immediately up-regulated during the natural seed senescence of both lines; the transcription response of BnCLIP1 in the high oil-content seeds was faster than the lower ones, suggesting a potential role of BnCLIP1 in affecting seed oil synthesis via regulating chloroplast integrity. Further researches showed that chemical disruption of leaf chloroplast also activated the transcription of BnCLIP1. The findings of this study show that BnCLIP1 encodes a lipase, localizes at the MCSs and involves in chloroplast development.

  16. A Brassica napus Lipase Locates at the Membrane Contact Sites Involved in Chloroplast Development

    PubMed Central

    Tan, Xiaoli; Wang, Qiuye; Tian, Baoxia; Zhang, Henan; Lu, Daoli; Zhou, Jia

    2011-01-01

    Background Fatty acids synthesized in chloroplast are transported to endoplasmic reticulum (ER) for triacylglycerols (TAGs) resembling. The development of chloroplast also requires lipids trafficking from ER to chloroplast. The membrane contact sites (MCSs) between ER and chloroplast has been demonstrated to be involved for the trafficking of lipids and proteins. Lipids trafficking between ER and chloroplast is often accompanied by lipids interconversion. However, it is rarely known how lipids interconversion happens during their trafficking. Methodology/Principal Findings We cloned a lipase gene from Brassica napus L., designated as BnCLIP1. Green fluorescence protein (GFP)-tagged BnCLIP1 was shown to locate at the MCSs between ER and chloroplasts in tobacco leaves. Heterogeneous expression of BnCLIP1 in Saccharomyces cerevisiae (pep4) reduced the total amount of fatty acid. Gas chromatography-mass spectrometry (GC-MS) analysis revealed that the truncated BnCLIP1 had a substrate preference for C16:0 lipids in Saccharomyces cerevisiae (pep4). To probe the physiological function of BnCLIP1, two Brassica napus lines with different oil-content were introduced to investigate the transcript patterns of BnCLIP1 during seed development. Intriguingly, the transcript level of BnCLIP1 was found to be immediately up-regulated during the natural seed senescence of both lines; the transcription response of BnCLIP1 in the high oil-content seeds was faster than the lower ones, suggesting a potential role of BnCLIP1 in affecting seed oil synthesis via regulating chloroplast integrity. Further researches showed that chemical disruption of leaf chloroplast also activated the transcription of BnCLIP1. Conclusions/Significance The findings of this study show that BnCLIP1 encodes a lipase, localizes at the MCSs and involves in chloroplast development. PMID:22046373

  17. Preliminary geohydrologic site characterization and proposed water quality well locations for WAG 7, WAG 8 and WAG 9

    SciTech Connect

    Baughn, D.C.

    1987-09-01

    The purpose of this report is to assess general site conditions and to recommend water quality well locations at three Waste Area Groupings (WAGS) within the Oak Ridge National Laboratory (ORNL) complex. The subject sites are WAGs 7, 8 and 9 each of which is identified on the general site location map. For reference, the relationship of the subject sites to other WAGs are shown. WAGs are regions prescribed by Martin Marietta throughout the ORNL complex that require environmental assessment. WAGs contain solid waste management units such as Solid Waste Storage Areas (SWSAs), as well as pipelines, spill sites, buildings, ponds and experimental test sites. These solid waste management units are considered to be potential sources of contamination. The WAG boundaries describe the areal limits of specific waste management operations as well as currently known areas of waste constituent migration. Because solid waste management units within WAGs 7, 8 and 9 may continue to release waste constituents to the environment, the existing groundwater monitoring systems is being upgraded. This report recommends locations for water quality wells which will be installed at these three WAG boundaries in order to gather water quality data. The proposed well locations are shown. Water quality well design coordinates (ORNL grid) and estimated completion depths are given.

  18. The impact of an efficient collection sites location on the zoning phase in municipal solid waste management

    SciTech Connect

    Ghiani, Gianpaolo Manni, Andrea Manni, Emanuele Toraldo, Massimiliano

    2014-11-15

    Highlights: • We study the problems of locating collection areas and zoning the service territory in a municipal waste management system. • We investigate the impact that an efficient collection sites location has on the subsequent zoning phase. • On a real-world test case, we show that the proposed approach could allow achieving significant monetary savings. - Abstract: In this paper, we study two decisional problems arising when planning the collection of solid waste, namely the location of collection sites (together with bin allocation) and the zoning of the service territory, and we assess the potential impact that an efficient location has on the subsequent zoning phase. We first propose both an exact and a heuristic approach to locate the unsorted waste collection bins in a residential town, and to decide the capacities and characteristics of the bins to be located at each collection site. A peculiar aspect we consider is that of taking into account the compatibility between the different types of bins when allocating them to collection areas. Moreover, we propose a fast and effective heuristic approach to identify homogeneous zones that can be served by a single collection vehicle. Computational results on data related to a real-life instance show that an efficient location is fundamental in achieving consistent monetary savings, as well as a reduced environmental impact. These reductions are the result of one vehicle less needed to perform the waste collection operations, and an overall traveled distance reduced by about 25% on the average.

  19. Site characteristics of red spruce witness tree locations in the uplands of West Virginia, USA

    Treesearch

    Melissa Thomas-Van Gundy; Michael Strager; James. Rentch

    2012-01-01

    Knowledge, both of the historical range of spruce-dominated forests and associated site conditions, is needed by land managers to help define restoration goals and potential sites for restoration. We used an existing digital database of witness trees listed in deeds from 1752 to 1899 to compare characteristics of red spruce (Picea rubens Sarg.) sites...

  20. Environmental status of algal mat sites located at the east coast of Saudi Arabia following the Gulf War

    SciTech Connect

    Al-Thukair, A. )

    1993-06-01

    Remote sensing techniques and ground truth verification were used to provide information on algal mat locations and damage intensity caused by the oil spill. Pre and post oil spill satellite images, ground truth assessment were compared for damage evaluation. Locations and sites status (heavily oiled, recovering, and no algal mats) were conveyed in maps. Recovered sites are found in Abu Ali and Tanajib areas. However, recovery seems to be slower in Abu Ali area as compared to Tanajib. Different types and formations of algal mats were found in both areas. This differentiation is more likely to be attributable to coastal topography and tide regimes.

  1. Modeling a tracer test at the Grimsel Test Site (GTS) using a lattice Boltzmann method and transmissivity field

    NASA Astrophysics Data System (ADS)

    Kim, J. W.; Lanyon, G. W.; Baik, M. H.; Blechschmidt, I.

    2015-12-01

    A series of tracer tests have been conducted in the Migration (MI) Shear Zone at the Grimsel Test Site (GTS) for the Colloid Formation and Migration Project (CFM). As a part of the series, a dipole test (Tracer Test Run 13-05) using radionuclides, colloids and conservative tracers was performed to determine the breakthrough between CRR99.002-i2 and BOMI87.010-i2. To date, the breakthrough data of only the conservative dye tracer (Amino-G acid) are available. In the preceding project, the Colloid and Radionuclide Retardation Project (CRR), a transmissivity field for the MI shear zone was obtained by the geostatistical inverse modeling approach. In this study, the breakthrough of the tracer was computed by a gray lattice Boltzmann method (LBM). The transmissivity field with finite elements grid was transformed to the effective fracture aperture or flow porosity according to the cubic law, and the grid was uniformalized by the interpolation. The uniform mesh of the effective aperture was utilized as the model domain of the gray LBM. In the gray LBM, the heterogeneity of the aperture was dealt with a partial-bounceback scheme. The profiles of hydraulic heads monitored at the boreholes nearby were used as the reference values in the calculation of the pressure distribution in the model domain. The modeling results could reveal a dominant pathway of tracers in the dipole test. The developed model can be utilized in the calculation of the reactive transports of radionuclides and colloids by coupling with a geochemical model, such as Phreeqc, the Geochemist's Workbench, etc.

  2. Incorporation of Co(II) in dealuminated BEA zeolite at lattice tetrahedral sites evidenced by XRD, FTIR, diffuse reflectance UV-Vis, EPR, and TPR.

    PubMed

    Dzwigaj, S; Che, M

    2006-06-29

    A CoSiBEA zeolite is prepared by a two-step postsynthesis method that consists of first creating vacant T-sites with associated silanol groups by dealumination of TEABEA zeolite with nitric acid and then impregnating the resulting SiBEA zeolite with an aqueous solution of Co(NO3)2. The incorporation of Co into lattice sites of SiBEA is evidenced by XRD. The consumption of OH groups is monitored by FTIR. The presence of Co in its II oxidation state and in tetrahedral coordination is evidenced by diffuse reflectance UV-vis and EPR spectroscopy. The very high reduction temperature (1120 K) of cobalt in CoSiBEA zeolite determined by TPR confirms that Co interacts strongly with the zeolite support, consistent with lattice tetrahedral (T(d)) coordination.

  3. Stabilization of the chiral phase of the SU (6 m ) Heisenberg model on the honeycomb lattice with m particles per site for m larger than 1

    NASA Astrophysics Data System (ADS)

    Dufour, Jérôme; Mila, Frédéric

    2016-09-01

    We show that, when N is a multiple of 6 (N =6 m , where m is an integer), the SU (N) Heisenberg model on the honeycomb lattice with m particles per site has a clear tendency toward chiral order as soon as m ≥2 . This conclusion has been reached by a systematic variational Monte Carlo investigation of Gutzwiller projected wave functions as a function of m between the case of one particle per site (m =1 ), for which the ground state has recently been shown to be in a plaquette singlet state, and the m →∞ limit, where a mean-field approach has established that the ground state has chiral order. This demonstrates that the chiral phase can indeed be stabilized for not too large values of m , opening the way to its experimental realizations in other lattices.

  4. Atomistic study on the site preference and lattice vibration of Gd3-xYxCo29T4B10 (T=Al and Ge)

    NASA Astrophysics Data System (ADS)

    Cheng, Hai-Xia; Wang, Xiao-Xu; Hu, Yao-Wen; Zhang, Guo-Hua; Shen, Jiang; Qian, Ping; Chen, Nan-Xian

    2015-04-01

    The effects of the Y substitution for Gd on the structural stability and the site preference of intermetallics Gd3-xYxCo29T4B10 (T=Al and Ge) are studied by using a series of interatomic pair potentials. The calculated results show Y can stabilize Gd3-xYxCo29T4B10 with the tetragonal structure, and Y substitute for Gd with a strong preference for the 2b sites. The calculated lattice parameters are in good agreement with the experimental data. Furthermore, the total and partial phonon densities of states are evaluated for the Gd3-xYxCo29T4B10 compounds with the tetragonal structure. A qualitative analysis is carried out with the relevant potentials for the vibrational modes, which makes it possible to predict some properties related to lattice vibration.

  5. Sunflower (Helianthus annuus) pollination in California's Central Valley is limited by native bee nest site location.

    PubMed

    Sardiñas, Hillary S; Tom, Kathleen; Ponisio, Lauren Catherine; Rominger, Andrew; Kremen, Claire

    2016-03-01

    The delivery of ecosystem services by mobile organisms depends on the distribution of those organisms, which is, in turn, affected by resources at local and landscape scales. Pollinator-dependent crops rely on mobile animals like bees for crop production, and the spatial relationship between floral resources and nest location for these central-place foragers influences the delivery of pollination services. Current models that map pollination coverage in agricultural regions utilize landscape-level estimates of floral availability and nesting incidence inferred from expert opinion, rather than direct assessments. Foraging distance is often derived from proxies of bee body size, rather than direct measurements of foraging that account for behavioral responses to floral resource type and distribution. The lack of direct measurements of nesting incidence and foraging distances may lead to inaccurate mapping of pollination services. We examined the role of local-scale floral resource presence from hedgerow plantings on nest incidence of ground-nesting bees in field margins and within monoculture, conventionally managed sunflower fields in California's Central Valley. We tracked bee movement into fields using fluorescent powder. We then used these data to simulate the distribution of pollination services within a crop field. Contrary to expert opinion, we found that ground-nesting native bees nested both in fields and edges, though nesting rates declined with distance into field. Further, we detected no effect of field-margin floral enhancements on nesting. We found evidence of an exponential decay rate of bee movement into fields, indicating that foraging predominantly occurred in less than 1% of medium-sized bees' predicted typical foraging range. Although we found native bees nesting within agricultural fields, their restricted foraging movements likely centralize pollination near nest sites. Our data thus predict a heterogeneous distribution of pollination services

  6. Controls of surface topography on submarine and subaerial hydrothermal fluid flow and vent-site location

    NASA Astrophysics Data System (ADS)

    Bani Hassan, N.; Rupke, L.; Iyer, K. H.; Borgia, A.

    2010-12-01

    flanks or even topographic lows (submarine case). Amplitude also has a first-order effect of focusing the vent sites on topographic highs and lows. Another observation is that the wavelength of the topography affects the number of plumes generated in the model. These findings are confirmed in two case studies for the submarine Lucky Strike hydrothermal field on the Mid-Atlantic Ridge and the subaerial geothermal field of Amiata, Italy. In both case studies the predicted vent locations fit well with the observed ones.

  7. Co-doping of (Bi(0.5)Na(0.5))TiO(3): secondary phase formation and lattice site preference of Co.

    PubMed

    Schmitt, V; Staab, T E M

    2012-11-14

    Bismuth sodium titanate (Bi(0.5)Na(0.5))TiO(3) (BNT) is considered to be one of the most promising lead-free alternatives to piezoelectric lead zirconate titanate (PZT). However, the effect of dopants on the material has so far received little attention from an atomic point of view. In this study we investigated the effects of cobalt-doping on the formation of additional phases and determined the preferred lattice site of cobalt in BNT. The latter was achieved by comparing the measured x-ray absorption near-edge structure (XANES) spectra to numerically calculated spectra of cobalt on various lattice sites in BNT. (Bi(0.5)Na(0.5))TiO(3) + x mol% Co (x = 0.0, 0.5, 1.0, 2.6) was synthesized via solid state reaction. As revealed by SEM backscattering images, a secondary phase formed in all doped specimens. Using both XRD and SEM-EDX, it was identified as Co(2)TiO(4) for dopant levels >0.5 mol%. In addition, a certain amount of cobalt was incorporated into BNT, as shown by electron probe microanalysis. This amount increased with increasing dopant levels, suggesting that an equilibrium forms together with the secondary phase. The XANES experiments revealed that cobalt occupies the octahedral B-site in the BNT perovskite lattice, substituting Ti and promoting the formation of oxygen vacancies in the material.

  8. Atmospheric polycyclic aromatic hydrocarbons in remote European and Atlantic sites located above the boundary mixing layer.

    PubMed

    Van Drooge, Barend Leendert; Fernández, Pilar; Grimalt, Joan O; Stuchlík, Evzen; Torres García, Carlos J; Cuevas, Emilio

    2010-07-01

    Ambient air concentrations of polycyclic aromatic hydrocarbons (PAH) were determined at five elevated mountain sites on the European continent and the Atlantic Ocean. All sites can be considered remote background areas since they are situated above the timberline and they lack local emission sources of these compounds. Average gas phase concentrations of SigmaPAH were 165, 1,475, 1,553, 1,822 and 4,443 pg m(-3) for Tenerife, Pyrenees, Central Norway, Tyrolean Alps and High Tatras, respectively. Particulate phase concentrations were 55, 70, 383, 196 and 708 pg m(-3), respectively. The PAH profiles of samples from the different sites are very similar, being typical of PAH mixtures after long-range atmospheric transport. Part of the fluctuations in PAH concentrations are explained by the influence of temperature on the particulate/gas phase partitioning. The differences in PAH levels between sites, with the lowest concentrations found in Tenerife and the highest in the High Tatras, suggest the geographical influence of regional emissions on the sites, especially in the cold periods and for the sites in the eastern sector of the European continent. This is supported by air mass back-trajectories analysis for the samples on the different sites. The influence of the continent is not detectable in the case of the elevated site of Tenerife where the free troposphere has been sampled. The results in this study are consistent with the PAH levels found in soils and/or high mountain lake sediments from these areas.

  9. Automated location detection of injection site for preclinical stereotactic neurosurgery procedure

    NASA Astrophysics Data System (ADS)

    Abbaszadeh, Shiva; Wu, Hemmings C. H.

    2017-03-01

    Currently, during stereotactic neurosurgery procedures, the manual task of locating the proper area for needle insertion or implantation of electrode/cannula/optic fiber can be time consuming. The requirement of the task is to quickly and accurately find the location for insertion. In this study we investigate an automated method to locate the entry point of region of interest. This method leverages a digital image capture system, pattern recognition, and motorized stages. Template matching of known anatomical identifiable regions is used to find regions of interest (e.g. Bregma) in rodents. For our initial study, we tackle the problem of automatically detecting the entry point.

  10. Location, Location, Location!

    ERIC Educational Resources Information Center

    Ramsdell, Kristin

    2004-01-01

    Of prime importance in real estate, location is also a key element in the appeal of romances. Popular geographic settings and historical periods sell, unpopular ones do not--not always with a logical explanation, as the author discovered when she conducted a survey on this topic last year. (Why, for example, are the French Revolution and the…

  11. Location, Location, Location!

    ERIC Educational Resources Information Center

    Ramsdell, Kristin

    2004-01-01

    Of prime importance in real estate, location is also a key element in the appeal of romances. Popular geographic settings and historical periods sell, unpopular ones do not--not always with a logical explanation, as the author discovered when she conducted a survey on this topic last year. (Why, for example, are the French Revolution and the…

  12. 76 FR 61367 - Medical Device User Fee and Modernization Act; Notice to Public of Web Site Location of Fiscal...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-04

    ... HUMAN SERVICES Food and Drug Administration Medical Device User Fee and Modernization Act; Notice to Public of Web Site Location of Fiscal Year 2012 Proposed Guidance Development AGENCY: Food and Drug Administration, HHS. ACTION: Notice. SUMMARY: The Food and Drug Administration (FDA) is announcing the Web...

  13. Long-Range School Site Location Plan: PROJECT DESIGN. Interagency Planning for Urban Educational Needs, Number 36.

    ERIC Educational Resources Information Center

    Tokmakian, Harold

    This report, written as part of Phase II of PROJECT DESIGN, an ESEA Title III project administered by the Fresno City Unified School District, contains an analysis of the factors that must be considered in locating new school sites for the Fresno district as well as the principles and standards related to community planning and school site…

  14. 43 CFR 3838.10 - Procedures for locating and recording a mining claim or tunnel site on SRHA lands.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Procedures for locating and recording a mining claim or tunnel site on SRHA lands. 3838.10 Section 3838.10 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR...

  15. 43 CFR 3838.10 - Procedures for locating and recording a mining claim or tunnel site on SRHA lands.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Procedures for locating and recording a mining claim or tunnel site on SRHA lands. 3838.10 Section 3838.10 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR...

  16. 43 CFR 3838.10 - Procedures for locating and recording a mining claim or tunnel site on SRHA lands.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Procedures for locating and recording a mining claim or tunnel site on SRHA lands. 3838.10 Section 3838.10 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR...

  17. 43 CFR 3838.10 - Procedures for locating and recording a mining claim or tunnel site on SRHA lands.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Procedures for locating and recording a mining claim or tunnel site on SRHA lands. 3838.10 Section 3838.10 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL PROCEDURES FOR...

  18. Spatiotemporal dissipative solitons in two-dimensional photonic lattices.

    PubMed

    Mihalache, Dumitru; Mazilu, Dumitru; Lederer, Falk; Kivshar, Yuri S

    2008-11-01

    We analyze spatiotemporal dissipative solitons in two-dimensional photonic lattices in the presence of gain and loss. In the framework of the continuous-discrete cubic-quintic Ginzburg-Landau model, we demonstrate the existence of novel classes of two-dimensional spatiotemporal dissipative lattice solitons, which also include surface solitons located in the corners or at the edges of the truncated two-dimensional photonic lattice. We find the domains of existence and stability of such spatiotemporal dissipative solitons in the relevant parameter space, for both on-site and intersite lattice solitons. We show that the on-site solitons are stable in the whole domain of their existence, whereas most of the intersite solitons are unstable. We describe the scenarios of the instability-induced dynamics of dissipative solitons in two-dimensional lattices.

  19. [C-terminal fragment of ribosomal protein S15 is located at the decoding site of the human ribosome].

    PubMed

    Khaĭrulina, Iu S; Molotkov, M V; Bulygin, K N; Graĭfer, D M; Ven'iaminova, A G; Karpova, G G

    2008-01-01

    Protein S15 is a characteristic component of the mammalian 80S ribosome that neighbors mRNA codon at the decoding site and the downstream triplets. In this study we determined S15 protein fragments located close to mRNA positions +4 to +12 with respect to the first nucleotide of the P site codon on the human ribosome. For cross-linking to ribosomal protein S15, a set of mRNA was used that contained triplet UUU/UUC at the 5'-termini and a perfluorophenyl azide-modified uridine in position 3' of this triplet. The locations of mRNA analogues on the ribosome were governed by tRNAPhe cognate to the UUU/UUC triplet targeted to the P site. Cross-linked S15 protein was isolated from the irradiated with mild UV light complexes of 80S ribosomes with tRNAPhe and mRNA analogues with subsequent cleavage with CNBr that splits polypeptide chain after methionines. Analysis of modified oligopeptides resulted from the cleavage revealed that in all cases cross-linking site was located in C-terminal fragment 111-145 of protein S15 indicating that this fragment is involved in formation of decoding site of the eukaryotic ribosome.

  20. Where do we locate the moon base. [considering polar regions as preferred lunar observatory sites

    NASA Technical Reports Server (NTRS)

    Burke, J. D.

    1977-01-01

    Because the lunar polar regions permit continuous solar energy collection and adjacent cryogenic temperature, they may be the preferred sites for early human occupation and use of the moon. If permafrost exists in the polar shaded regions, this preference will become dominant. Though not ideal from the point of view of all-sky coverage for astronomical observations, and also possibly subject to terminator-plane particle hazes near the surface, polar sites (especially the south polar region) may offer enough advantages (e.g., constant cryogenic telescope environments and unlimited tracking time) to be preferred sites for the first lunar observatories.

  1. Location analysis and strontium-90 concentrations in deer antlers on the Hanford Site

    SciTech Connect

    Tiller, B L; Eberhardt, L E; Poston, T M

    1995-05-01

    The primary objective of this study was to examine the levels of strontium-90 ({sup 90}Sr) in deer antlers collected from near previously active reactor sites and distant from the reactor sites along that portion of the Columbia River which borders the Hanford Site. A second objective was to analyze the movements and home-ranges of mule deer residing within these areas and determine to what extent this information contributes to the observed {sup 90}Sr concentrations. {sup 90}Sr is a long-lived radionuclide (29.1 year half life) produced by fission in irradiated fuel in plutonium production reactors on the Hanford Site. It is also a major component of atmospheric fallout from weapons testing. Concentrations of radionuclides found in the developed environment onsite do not pose a health concern to humans or various wildlife routinely monitored. However, elevated levels of radionuclides in found biota may indicate routes of exposure requiring attention.

  2. Charge-regulation phase transition on surface lattices of titratable sites adjacent to electrolyte solutions: An analog of the Ising antiferromagnet in a magnetic field

    NASA Astrophysics Data System (ADS)

    Shore, Joel D.; Thurston, George M.

    2015-12-01

    We report a charge-patterning phase transition on two-dimensional square lattices of titratable sites, here regarded as protonation sites, placed in a low-dielectric medium just below the planar interface between this medium and a salt solution. We calculate the work-of-charging matrix of the lattice with use of a linear Debye-Hückel model, as input to a grand-canonical partition function for the distribution of occupancy patterns. For a large range of parameter values, this model exhibits an approximate inverse cubic power-law decrease of the voltage produced by an individual charge, as a function of its in-lattice separation from neighboring titratable sites. Thus, the charge coupling voltage biases the local probabilities of proton binding as a function of the occupancy of sites for many neighbors beyond the nearest ones. We find that even in the presence of these longer-range interactions, the site couplings give rise to a phase transition in which the site occupancies exhibit an alternating, checkerboard pattern that is an analog of antiferromagnetic ordering. The overall strength W of this canonical charge coupling voltage, per unit charge, is a function of the Debye length, the charge depth, the Bjerrum length, and the dielectric coefficients of the medium and the solvent. The alternating occupancy transition occurs above a curve of thermodynamic critical points in the (p H-p K ,W ) plane, the curve representing a charge-regulation analog of variation of the Néel temperature of an Ising antiferromagnet as a function of an applied, uniform magnetic field. The analog of a uniform magnetic field in the antiferromagnet problem is a combination of p H-p K and W , and 1 /W is the analog of the temperature in the antiferromagnet problem. We use Monte Carlo simulations to study the occupancy patterns of the titratable sites, including interactions out to the 37th nearest-neighbor category (a distance of √{74 } lattice constants), first validating simulations

  3. Charge-regulation phase transition on surface lattices of titratable sites adjacent to electrolyte solutions: An analog of the Ising antiferromagnet in a magnetic field.

    PubMed

    Shore, Joel D; Thurston, George M

    2015-12-01

    We report a charge-patterning phase transition on two-dimensional square lattices of titratable sites, here regarded as protonation sites, placed in a low-dielectric medium just below the planar interface between this medium and a salt solution. We calculate the work-of-charging matrix of the lattice with use of a linear Debye-Hückel model, as input to a grand-canonical partition function for the distribution of occupancy patterns. For a large range of parameter values, this model exhibits an approximate inverse cubic power-law decrease of the voltage produced by an individual charge, as a function of its in-lattice separation from neighboring titratable sites. Thus, the charge coupling voltage biases the local probabilities of proton binding as a function of the occupancy of sites for many neighbors beyond the nearest ones. We find that even in the presence of these longer-range interactions, the site couplings give rise to a phase transition in which the site occupancies exhibit an alternating, checkerboard pattern that is an analog of antiferromagnetic ordering. The overall strength W of this canonical charge coupling voltage, per unit charge, is a function of the Debye length, the charge depth, the Bjerrum length, and the dielectric coefficients of the medium and the solvent. The alternating occupancy transition occurs above a curve of thermodynamic critical points in the (pH-pK,W) plane, the curve representing a charge-regulation analog of variation of the Néel temperature of an Ising antiferromagnet as a function of an applied, uniform magnetic field. The analog of a uniform magnetic field in the antiferromagnet problem is a combination of pH-pK and W, and 1/W is the analog of the temperature in the antiferromagnet problem. We use Monte Carlo simulations to study the occupancy patterns of the titratable sites, including interactions out to the 37th nearest-neighbor category (a distance of √74 lattice constants), first validating simulations through

  4. Cooperativity between remote sites of ectopic spiking allows afterdischarge to be initiated and maintained at different locations

    PubMed Central

    Coggan, Jay S; Sejnowski, Terrence J; Prescott, Steven A

    2015-01-01

    Many symptoms of nerve damage arise from ectopic spiking caused by hyperexcitability. Ectopic spiking can originate at the site of axonal damage and elsewhere within affected neurons. This raises the question of whether localized damage elicits cell-wide changes in excitability and/or if localized changes in excitability can drive abnormal spiking at remote locations. Computer modeling revealed an example of the latter involving afterdischarge (AD) – stimulus-evoked spiking that outlasts stimulation. We found that AD originating in a hyperexcitable region of axon could shift to the soma where it was maintained. This repositioning of ectopic spike initiation was independent of distance between the two sites but relied on the rate and number of ectopic spikes originating from the first site. Nonlinear dynamical analysis of a reduced model demonstrated that properties which rendered the axonal site prone to initiating AD discouraged it from maintaining AD, whereas the soma had the inverse properties thus enabling the two sites to interact cooperatively. A first phase of AD originating in the axon could, by providing sufficient drive to trigger somatic AD, give way to a second phase of AD originating in the soma such that spiking continued when axonal AD failed. Ectopic spikes originating from the soma during phase 2 AD propagated successfully through the defunct site of axonal spike initiation. This novel mechanism whereby ectopic spiking at one site facilitates ectopic spiking at another site is likely to contribute to the chronification of hyperexcitability in conditions such as neuropathic pain. PMID:25929191

  5. The Location and Siting of Public Libraries in Australian Capital Cities with Special Reference to Melbourne.

    ERIC Educational Resources Information Center

    Dunstan, Douglas Warwick

    Provisions for the control and planning of public libraries in Australian capital cities are examined from an urban planning viewpoint. Discussion focuses on: (1) attitudes, statements, and the availability of data regarding locational planning of public libraries in urban areas; (2) planning techniques and principles which are of value to urban…

  6. Tables of co-located geothermal-resource sites and BLM Wilderness Study Areas

    SciTech Connect

    Foley, D.; Dorscher, M.

    1982-11-01

    Matched pairs of known geothermal wells and springs with BLM proposed Wilderness Study Areas (WSAs) were identified by inspection of WSA and Geothermal resource maps for the states of Arizona, California, Colorado, Idaho, Montana, Nevada, New Mexico, Oregon, Utah, Washington and Wyoming. A total of 3952 matches, for geothermal sites within 25 miles of a WSA, were identified. Of these, only 71 (1.8%) of the geothermal sites are within one mile of a WSA, and only an additional 100 (2.5%) are within one to three miles. Approximately three-fourths of the matches are at distances greater than ten miles. Only 12 of the geothermal sites within one mile of a WSA have surface temperatures reported above 50/sup 0/C. It thus appears that the geothermal potential of WSAs overall is minimal, but that evaluation of geothermal resources should be considered in more detail for some areas prior to their designation as Wilderness.

  7. Theoretical description of two ultracold atoms in a single site of a three-dimensional optical lattice using realistic interatomic interaction potentials

    SciTech Connect

    Grishkevich, Sergey; Saenz, Alejandro

    2009-07-15

    A theoretical approach was developed for an exact numerical description of a pair of ultracold atoms interacting via a central potential, which is trapped in a three-dimensional optical lattice. The coupling of center-of-mass and relative-motion coordinates is explicitly considered using a configuration-interaction (exact-diagonalization) technique. Deviations from the harmonic approximation are discussed for several heteronuclear alkali-metal atom pairs trapped in a single site of an optical lattice. The consequences are discussed for the analysis of a recent experiment [C. Ospelkaus et al., Phys. Rev. Lett. 97, 120402 (2006)] in which radio-frequency association was used to create diatomic molecules from a fermionic and a bosonic atom and to measure their binding energies close to a magnetic Feshbach resonance.

  8. The impact of an efficient collection sites location on the zoning phase in municipal solid waste management.

    PubMed

    Ghiani, Gianpaolo; Manni, Andrea; Manni, Emanuele; Toraldo, Massimiliano

    2014-11-01

    In this paper, we study two decisional problems arising when planning the collection of solid waste, namely the location of collection sites (together with bin allocation) and the zoning of the service territory, and we assess the potential impact that an efficient location has on the subsequent zoning phase. We first propose both an exact and a heuristic approach to locate the unsorted waste collection bins in a residential town, and to decide the capacities and characteristics of the bins to be located at each collection site. A peculiar aspect we consider is that of taking into account the compatibility between the different types of bins when allocating them to collection areas. Moreover, we propose a fast and effective heuristic approach to identify homogeneous zones that can be served by a single collection vehicle. Computational results on data related to a real-life instance show that an efficient location is fundamental in achieving consistent monetary savings, as well as a reduced environmental impact. These reductions are the result of one vehicle less needed to perform the waste collection operations, and an overall traveled distance reduced by about 25% on the average.

  9. Computational detection and location of transcription start sites in mammalian genomic DNA.

    PubMed

    Down, Thomas A; Hubbard, Tim J P

    2002-03-01

    Transcription, the process whereby RNA copies are made from sections of the DNA genome, is directed by promoter regions. These define the transcription start site, and also the set of cellular conditions under which the promoter is active. At least in more complex species, it appears to be common for genes to have several different transcription start sites, which may be active under different conditions. Eukaryotic promoters are complex and fairly diffuse structures, which have proven hard to detect in silico. We show that a novel hybrid machine-learning method is able to build useful models of promoters for >50% of human transcription start sites. We estimate specificity to be >70%, and demonstrate good positional accuracy. Based on the structure of our learned models, we conclude that a signal resembling the well known TATA box, together with flanking regions of C-G enrichment, are the most important sequence-based signals marking sites of transcriptional initiation at a large class of typical promoters.

  10. Relationship Between PM2.5 Collected at Residential Outdoor Locations and a Central Site

    EPA Science Inventory

    Regression models are developed to describe the relationship between ambient PM2.5 (particulate matter [PM] ≤ 2.5 μm in aerodynamic diameter) mass concentrations measured at a central-site monitor with those at residential outdoor monitors. Understanding the...

  11. Bird use of reforestation sites: Influence of location and vertical structure

    USGS Publications Warehouse

    Twedt, Daniel J.; Cooper, Robert

    2005-01-01

    In the Lower Mississippi Valley, more than 300,000 acres of agricultural land have been reforested in the last 10 years. Planning decisions on how and where to restore forest are complex and usually reflect landowner objectives. However, initial planning decisions may have a large influence on the value of restored stands for birds and other wildlife.Reforestation of small, isolated tracts will likely result in mature forests where reproductive output of breeding birds does not compensate for adult mortality (sink habitats). This may be due to factors such as lower reproductive success near edges (edge effects), insufficient area of habitat to attract colonizing birds (area effects), or restricted population mixing and mating opportunities because of limited dispersal among tracts (isolation effects).Conversely, reforestation adjacent to existing forest increases contiguous forest area and provides areas buffered from agricultural or urban habitats (interior forest core).Bottomland reforestation has historically focused on planting relatively slow-growing tree species, particularly oaks (Quercus spp.). Thus, restoration sites are often dominated by grasses and forbs for up to a decade after tree planting. Grassland birds are the first birds to colonize reforested sites. However, abundance and productivity of grassland birds is generally poor on sites associated with woody vegetation, such as sites adjacent to mature forest.As woody vegetation develops on reforested sites, birds preferring shrub-scrub habitat displace grassland species (Twedt et al. 2002) (fig. 1). Planting faster-growing trees compresses the time for colonization by shrub-scrub birds and the increased vertical stature of these trees attracts forest birds (Twedt and Portwood 1996). Additionally, planting next to existing mature forests creates transitional edges that reduce the detrimental effects of abrupt forest-agriculture interfaces.

  12. Location of the unique integration site on an Escherichia coli chromosome by bacteriophage lambda DNA in vivo

    PubMed Central

    Tal, Asaf; Arbel-Goren, Rinat; Costantino, Nina; Court, Donald L.; Stavans, Joel

    2014-01-01

    The search for specific sequences on long genomes is a key process in many biological contexts. How can specific target sequences be located with high efficiency, within physiologically relevant times? We addressed this question for viral integration, a fundamental mechanism of horizontal gene transfer driving prokaryotic evolution, using the infection of Escherichia coli bacteria with bacteriophage λ and following the establishment of a lysogenic state. Following the targeting process in individual live E. coli cells in real time revealed that λ DNA remains confined near the entry point of a cell following infection. The encounter between the 15-bp-long target sequence on the chromosome and the recombination site on the viral genome is facilitated by the directed motion of bacterial DNA generated during chromosome replication, in conjunction with constrained diffusion of phage DNA. Moving the native bacterial integration site to different locations on the genome and measuring the integration frequency in these strains reveals that the frequencies of the native site and a site symmetric to it relative to the origin are similar, whereas both are significantly higher than when the integration site is moved near the terminus, consistent with the replication-driven mechanism we propose. This novel search mechanism is yet another example of the exquisite coevolution of λ with its host. PMID:24799672

  13. Location selection criteria for a second data center or off-site storage of materials.

    PubMed

    Cochran, Mitchell; Witman, Paul

    2013-01-01

    As organizations develop secondary data centers, it is critical that they be placed in locations that serve the organization yet do not have a shared risk with the primary data center. The organization needs to consider factors or guidelines which mitigate potential issues that could affect both the primary and secondary data center. It is impossible to eliminate all risk to a single data center but an organization needs to ensure that at least one data center remains operable. The article will propose that data centers be located 50 km or approximately 30 miles apart. The proposal is supported by evaluating earthquake intensity maps that will show that earthquakes damage drops to relatively safe levels after the 30 miles from the epicenter. The article will show that other environmental factors such as power, floods, fire, transportation, fire, and soil are also mitigated by a 30-mile separation guideline.

  14. Evaluation of sites for the location of WEEE recycling plants in Spain.

    PubMed

    Queiruga, Dolores; Walther, Grit; González-Benito, Javier; Spengler, Thomas

    2008-01-01

    As a consequence of new European legal regulations for treatment of waste electrical and electronic equipment (WEEE), recycling plants have to be installed in Spain. In this context, this contribution describes a method for ranking of Spanish municipalities according to their appropriateness for the installation of these plants. In order to rank the alternatives, the discrete multi-criteria decision method PROMETHEE (Preference Ranking Organisation METHod for Enrichment Evaluations), combined with a surveys of experts, is applied. As existing plants are located in North and East Spain, a significant concentration of top ranking municipalities can be observed in South and Central Spain. The method does not present an optimal structure of the future recycling system, but provides a selection of good alternatives for potential locations of recycling plants.

  15. Microwave detection system for locating hemorrhage sites within the cranium and other regions

    NASA Astrophysics Data System (ADS)

    Riechers, Ronald G., Sr.; Pasala, Krishna M.; Ling, Geoffrey S. F.

    1998-05-01

    A novel method for location and characterization of discontinuities in biological system is presented. The method uses electromagnetic waves in the microwave and RF region and a modified algorithm previously used for the estimation of the angle of arrival of radar signals. Results are presented for the case of a skull section backed by porcine brain and the same section backed by a layer of blood backed by porcine brain.

  16. Site fidelity and individual variation in winter location in partially migratory European shags.

    PubMed

    Grist, Hannah; Daunt, Francis; Wanless, Sarah; Nelson, Emily J; Harris, Mike P; Newell, Mark; Burthe, Sarah; Reid, Jane M

    2014-01-01

    In partially migratory populations, individuals from a single breeding area experience a range of environments during the non-breeding season. If individuals show high within- and among- year fidelity to specific locations, any annual environmental effect on individual life histories could be reinforced, causing substantial demographic heterogeneity. Quantifying within- and among- individual variation and repeatability in non-breeding season location is therefore key to predicting broad-scale environmental impacts on the dynamics of partially migratory populations. We used field resightings of colour-ringed adult European shags known to have bred on the Isle of May, Scotland, to quantify individual variation and repeatability in winter location within and among three consecutive winters. In total, 3797 resightings of 882 individuals were recorded over 622 km of coastline, including the Isle of May. These individuals comprised over 50% of the known breeding population, and encompassed representative distributions of ages and sexes. The distances from the Isle of May at which individuals were resighted during winter varied substantially, up to 486 km and 136 km north and south respectively and including the breeding colony on the Isle of May. However, resighting distances were highly repeatable within individuals; within- and among-winter repeatabilities were >0.72 and >0.59 respectively across the full September-March observation period, and >0.95 and >0.79 respectively across more restricted mid-winter periods. Repeatability did not differ significantly between males and females or among different age classes, either within or among winters. These data demonstrate that the focal shag population is partially migratory, and moreover that individuals show highly repeatable variation in winter location and hence migration strategy across consecutive winters. Such high among-individual variation and within-individual repeatability, both within and among winters, could

  17. Site Fidelity and Individual Variation in Winter Location in Partially Migratory European Shags

    PubMed Central

    Grist, Hannah; Daunt, Francis; Wanless, Sarah; Nelson, Emily J.; Harris, Mike P.; Newell, Mark; Burthe, Sarah; Reid, Jane M.

    2014-01-01

    In partially migratory populations, individuals from a single breeding area experience a range of environments during the non-breeding season. If individuals show high within- and among- year fidelity to specific locations, any annual environmental effect on individual life histories could be reinforced, causing substantial demographic heterogeneity. Quantifying within- and among- individual variation and repeatability in non-breeding season location is therefore key to predicting broad-scale environmental impacts on the dynamics of partially migratory populations. We used field resightings of colour-ringed adult European shags known to have bred on the Isle of May, Scotland, to quantify individual variation and repeatability in winter location within and among three consecutive winters. In total, 3797 resightings of 882 individuals were recorded over 622 km of coastline, including the Isle of May. These individuals comprised over 50% of the known breeding population, and encompassed representative distributions of ages and sexes. The distances from the Isle of May at which individuals were resighted during winter varied substantially, up to 486 km and 136 km north and south respectively and including the breeding colony on the Isle of May. However, resighting distances were highly repeatable within individuals; within- and among-winter repeatabilities were >0.72 and >0.59 respectively across the full September-March observation period, and >0.95 and >0.79 respectively across more restricted mid-winter periods. Repeatability did not differ significantly between males and females or among different age classes, either within or among winters. These data demonstrate that the focal shag population is partially migratory, and moreover that individuals show highly repeatable variation in winter location and hence migration strategy across consecutive winters. Such high among-individual variation and within-individual repeatability, both within and among winters, could

  18. Femur, tibia and fibula bone templates to estimate subject-specific knee ligament attachment site locations.

    PubMed

    Pillet, Hélène; Bergamini, Elena; Rochcongar, Goulven; Camomilla, Valentina; Thoreux, Patricia; Rouch, Philippe; Cappozzo, Aurelio; Skalli, Wafa

    2016-10-03

    In-vivo estimates of the positions of knee ligament attachment sites are crucial for subject-specific knee modelling. The present study provides template digital models of femur, tibia and fibula that embed the positions of centroids of the origins and insertions of cruciate and collateral ligaments, along with information on their dispersion related to inter-individual variability. By using a shape transformation procedure of choice, these templates can be made to match anatomical information measured on a subject under analysis. Generic bone digital models of the femur, tibia and fibula were first chosen as bone templates. Ligament attachment areas were accurately identified through dissection on the bones of 11 knee specimens, and marked using radio opaque paint. Digital models of these bones embedding the positions of the centroids of the identified ligament attachment areas were thereafter obtained using medical imaging techniques. These centroids were mapped onto the relevant bone template, thus obtaining a cloud of 11 points for each attachment site, and descriptive statistics of the position of these points were thereafter determined. Dispersion of these positions, essentially due to inter-individual variability, was below 6mm for all attachment areas. The accuracy with which subject-specific ligament attachment site positions may be estimated using the bone template models provided in this paper was also assessed using the above-mentioned 11 specimens data set, and a leave-one-out cross validation approach. Average accuracy was found to be 3.3±1.5mm and 5.8±2.9mm for femoral and tibial/fibular attachment sites, respectively.

  19. Chronic toxicity evaluation of the Savannah River Site DETF discharges and three locations on Tims Branch

    SciTech Connect

    Not Available

    1990-10-01

    Chronic toxicity tests with Ceriodaphnia dubia were conducted June 6--August 1, 1990, on the Savannah River Site M-Area supernate discharge effluent (M-004), the A-014 effluent discharge with and without DETF process flow, and for stream samples collected in Tims Branch upstream and downstream from A-014. A secondary objective of the study was to determine what DETF flow rate would not cause instream impact to the aquatic community. 2 figs., 68 tabs.

  20. Factors influencing the heavy metal bioaccessibility in soils were site dependent from different geographical locations.

    PubMed

    Zhu, Xiaodong; Yang, Fen; Wei, Chaoyang

    2015-09-01

    A soil survey was conducted in urban areas from five sites, including Beijing, Baotou, Datong, Fuyang, and Xiantao in China. The objective was to explore the most significant factors that may impact the bioaccessibility of heavy metals (Bio-HMs), including As, Cr, Cu, Pb, and Zn, in soils. Twenty to 30 composite soil samples were collected at each site. The various soil properties, including pH, particle size, Fe/Mn, and organic matter contents, were analyzed. The chemical operated forms of HMs in soils were measured by the Bureau of Reference (BCR) sequential extraction scheme, while the Bio-HMs were determined by the simple bioaccessibility extraction test (SBET) procedure. The concentrations of total heavy metals (T-HMs) in soils from different sites (cities) were in the range as As (5.69-9.86), Cr (77.42-230.20), Cu (15.68-36.54), Pb (14.12-58.93), and Zn (38.66-183.46) mg/kg. Cu and Pb had higher relative bioaccessibilities (48-70%) than those of As and Cr (6-15%), indicating higher health risks of the former than the latter two HMs. The Bio-HMs for various HMs were comparable to the first two or three combined BCR extracted fractions, with an exception of Cu, whose Bio-HMs were larger than the combined three BCR fractions, indicating that Cu was highly accessible in soils as compared with other HMs. Factor analysis showed that all variables, including soil property parameters and BCR extracted fractions, could be represented by three common factors extracted with higher than 0.5 loadings and ∼80% cumulative contribution to the total variance. Among the three common factors, factor 1, containing mainly pH, texture, and Fe/Mn variables, and factor 3, containing mainly organic matter variable, could be attributed to geographical regions, while factor 2, containing mainly BCR extracted fractions, could be ascribed to relative bioaccessibility of HMs (R-Bio-HMs). Interactive mapping of the main factors and cluster analysis were consistent, which supported the

  1. Correlation of positive prostate sextant biopsy locations to sites of positive surgical margins in radical prostatectomy specimens.

    PubMed

    Borboroglu, P G; Amling, C L

    2001-06-01

    To investigate whether sextant location of positive prostate biopsy predicts the site of positive surgical margins (PSM) at the time of radical prostatectomy (RP) in patients with clinical stage T1c prostate cancer. A retrospective query of the Center for Prostate Disease Research (CPDR) database at our institution identified 456 patients with clinical stage T1c prostate cancer who underwent standard sextant prostate biopsy prior to RP. Each biopsy was submitted separately for pathologic analysis according to sextant location. The sextant location of positive biopsies was compared to the sites of PSM after RP. PSM were found in 129 of 456 (28%) RP specimens. The incidence of PSM at the prostate apex in patients with a positive or negative apical sextant biopsy was similar (9 and 8% respectively, p>0.05). The incidence of PSM at the prostate base in patients with a positive or negative sextant biopsy of the prostate base was also the same (7% in both groups, p>0.05). As the number of positive biopsy cores on one side of the prostate increased (0, 1, 2, and 3) so did the chance of an ipsilateral PSM (5.4, 16.2, 35.7 and 45.0%, respectively; p<0.005). Positive sextant biopsy location (apex and base) does not correlate with site of PSM at RP. However, ipsilateral PSM are more likely as the number of positive sextant biopsies on that side increases. While pathologic processing of biopsy specimens according to longitudinal prostate location (base, mid and apex) is probably unnecessary, the number of positive biopsies on a given side may be useful preoperative information.

  2. Real-Time Safety Risk Assessment Based on a Real-Time Location System for Hydropower Construction Sites

    PubMed Central

    Fan, Qixiang; Qiang, Maoshan

    2014-01-01

    The concern for workers' safety in construction industry is reflected in many studies focusing on static safety risk identification and assessment. However, studies on real-time safety risk assessment aimed at reducing uncertainty and supporting quick response are rare. A method for real-time safety risk assessment (RTSRA) to implement a dynamic evaluation of worker safety states on construction site has been proposed in this paper. The method provides construction managers who are in charge of safety with more abundant information to reduce the uncertainty of the site. A quantitative calculation formula, integrating the influence of static and dynamic hazards and that of safety supervisors, is established to link the safety risk of workers with the locations of on-site assets. By employing the hidden Markov model (HMM), the RTSRA provides a mechanism for processing location data provided by the real-time location system (RTLS) and analyzing the probability distributions of different states in terms of false positives and negatives. Simulation analysis demonstrated the logic of the proposed method and how it works. Application case shows that the proposed RTSRA is both feasible and effective in managing construction project safety concerns. PMID:25114958

  3. Real-time safety risk assessment based on a real-time location system for hydropower construction sites.

    PubMed

    Jiang, Hanchen; Lin, Peng; Fan, Qixiang; Qiang, Maoshan

    2014-01-01

    The concern for workers' safety in construction industry is reflected in many studies focusing on static safety risk identification and assessment. However, studies on real-time safety risk assessment aimed at reducing uncertainty and supporting quick response are rare. A method for real-time safety risk assessment (RTSRA) to implement a dynamic evaluation of worker safety states on construction site has been proposed in this paper. The method provides construction managers who are in charge of safety with more abundant information to reduce the uncertainty of the site. A quantitative calculation formula, integrating the influence of static and dynamic hazards and that of safety supervisors, is established to link the safety risk of workers with the locations of on-site assets. By employing the hidden Markov model (HMM), the RTSRA provides a mechanism for processing location data provided by the real-time location system (RTLS) and analyzing the probability distributions of different states in terms of false positives and negatives. Simulation analysis demonstrated the logic of the proposed method and how it works. Application case shows that the proposed RTSRA is both feasible and effective in managing construction project safety concerns.

  4. Mapping a paleosurface and archaeological site location in an inland dune area in Brandenburg, Germany

    NASA Astrophysics Data System (ADS)

    Schneider, Anna; Hirsch, Florian; Wechler, Klaus-Peter; Raab, Alexandra; Raab, Thomas

    2017-04-01

    Mapping and visualizing the position of archaeological remains in the surface relief provides important basic information for archaeological survey design and interpretation. Geomorphological processes in (pre)history can have resulted in a modification of the local relief around archaeological sites, especially in areas that are prone to sediment erosion and relocation, so that models of past surfaces are necessary for a correct interpretation of archaeological survey results. In this study, we combined terrestrial survey and remote sensing methods to reconstruct the palaeorelief around two archaeological excavation sites in an inland dune area in southern Brandenburg, Germany. Remains from two Mesolithic hunter-gatherer camps were documented in archaeological excavations and found to be associated with a buried soil horizon. To gather information on the relief of the buried soil surface, we used a combination of sedimentological and pedological profile description of archaeological survey trenches and geophysical prospection with Ground-Penetrating Radar; supplemented by microdrone photography and photogrammetry, GPS surveys and analysis of LIDAR-based elevation models. A digital elevation model of the buried surface was created by combining point data from these sources. The buried surface morphology and the position of the archeological remains within the reconstructed landscape were analyzed in GIS. The comparison of the generated paleosurface model with the recent surface elevation model shows that sand remobilization resulted in a considerable reshaping of the relief. Analysis of the buried surface model further shows that the relief position of the two archaeological sites in the study area was considerably more prominent in relation to the corresponding buried soil surface than in relation to the recent surface morphology. Results affirm the importance of considering Holocene relief modifications in archaeological surveys.

  5. Integrating smart-phone based momentary location tracking with fixed site air quality monitoring for personal exposure assessment.

    PubMed

    Su, Jason G; Jerrett, Michael; Meng, Ying-Ying; Pickett, Melissa; Ritz, Beate

    2015-02-15

    Epidemiological studies investigating relationships between environmental exposures from air pollution and health typically use residential addresses as a single point for exposure, while environmental exposures in transit, at work, school or other locations are largely ignored. Personal exposure monitors measure individuals' exposures over time; however, current personal monitors are intrusive and cannot be operated at a large scale over an extended period of time (e.g., for a continuous three months) and can be very costly. In addition, spatial locations typically cannot be identified when only personal monitors are used. In this paper, we piloted a study that applied momentary location tracking services supplied by smart phones to identify an individual's location in space-time for three consecutive months (April 28 to July 28, 2013) using available Wi-Fi networks. Individual exposures in space-time to the traffic-related pollutants Nitrogen Oxides (NOX) were estimated by superimposing an annual mean NOX concentration surface modeled using the Land Use Regression (LUR) modeling technique. Individual's exposures were assigned to stationary (including home, work and other stationary locations) and in-transit (including commute and other travel) locations. For the individual, whose home/work addresses were known and the commute route was fixed, it was found that 95.3% of the time, the individual could be accurately identified in space-time. The ambient concentration estimated at the home location was 21.01 ppb. When indoor/outdoor infiltration, indoor sources of air pollution and time spent outdoors were taken into consideration, the individual's cumulative exposures were 28.59 ppb and 96.49 ppb, assuming a respective indoor/outdoor ratio of 1.33 and 5.00. Integrating momentary location tracking services with fixed-site field monitoring, plus indoor-outdoor air exchange calibration, makes exposure assessment of a very large population over an extended time period

  6. A Large-Sized Phytobezoar Located on the Rare Site of the Gastrointestinal Tract

    PubMed Central

    Yang, Jee Eun; Kim, Gi Ae; Kim, Ga Hee; Yoon, Da Lim; Jeon, Sung Jin; Jung, Hwoon-Yong; Kim, Jin-Ho

    2013-01-01

    Bezoars are concretions of undigested material and are most often observed in the stomach. They can occur at any site in the gastrointestinal tract; however, duodenal localization is very rare. We report the case of a 71-year-old male who had undergone subtotal gastrectomy with gastroduodenostomy and experienced severe epigastric discomfort, abdominal pain, and vomiting for a few days. An approximately 7×8 cm-sized mass was found on an abdominal computed tomography scan. On following endoscopy, a large bezoar was revealed in the duodenum and was removed using an endoscopic removal technique, assisted by a large amount of Coca-Cola infusion. PMID:23964339

  7. Ion Mobility Spectrometry-Hydrogen Deuterium Exchange Mass Spectrometry of Anions: Part 2. Assessing Charge Site Location and Isotope Scrambling.

    PubMed

    Khakinejad, Mahdiar; Kondalaji, Samaneh Ghassabi; Donohoe, Gregory C; Valentine, Stephen J

    2016-03-01

    Ion mobility spectrometry (IMS) coupled with gas-phase hydrogen deuterium exchange (HDX)-mass spectrometry (MS) and molecular dynamic simulations (MDS) has been used for structural investigation of anions produced by electrospraying a sample containing a synthetic peptide having the sequence KKDDDDDIIKIIK. In these experiments the potential of the analytical method for locating charge sites on ions as well as for utilizing collision-induced dissociation (CID) to reveal the degree of deuterium uptake within specific amino acid residues has been assessed. For diffuse (i.e., more elongated) [M - 2H](2-) ions, decreased deuterium content along with MDS data suggest that the D4 and D6 residues are charge sites, whereas for the more diffuse [M - 3H](3-) ions, the data suggest that the D4, D7, and the C-terminus are deprotonated. Fragmentation of mobility-selected, diffuse [M - 2H](2-) ions to determine deuterium uptake at individual amino acid residues reveals a degree of deuterium retention at incorporation sites. Although the diffuse [M - 3H](3-) ions may show more HD scrambling, it is not possible to clearly distinguish HD scrambling from the expected deuterium uptake based on a hydrogen accessibility model. The capability of the IMS-HDX-MS/MS approach to provide relevant details about ion structure is discussed. Additionally, the ability to extend the approach for locating protonation sites on positively-charged ions is presented.

  8. Ion Mobility Spectrometry-Hydrogen Deuterium Exchange Mass Spectrometry of Anions: Part 2. Assessing Charge Site Location and Isotope Scrambling

    NASA Astrophysics Data System (ADS)

    Khakinejad, Mahdiar; Ghassabi Kondalaji, Samaneh; Donohoe, Gregory C.; Valentine, Stephen J.

    2016-03-01

    Ion mobility spectrometry (IMS) coupled with gas-phase hydrogen deuterium exchange (HDX)-mass spectrometry (MS) and molecular dynamic simulations (MDS) has been used for structural investigation of anions produced by electrospraying a sample containing a synthetic peptide having the sequence KKDDDDDIIKIIK. In these experiments the potential of the analytical method for locating charge sites on ions as well as for utilizing collision-induced dissociation (CID) to reveal the degree of deuterium uptake within specific amino acid residues has been assessed. For diffuse (i.e., more elongated) [M - 2H]2- ions, decreased deuterium content along with MDS data suggest that the D4 and D6 residues are charge sites, whereas for the more diffuse [M - 3H]3- ions, the data suggest that the D4, D7, and the C-terminus are deprotonated. Fragmentation of mobility-selected, diffuse [M - 2H]2- ions to determine deuterium uptake at individual amino acid residues reveals a degree of deuterium retention at incorporation sites. Although the diffuse [M - 3H]3- ions may show more HD scrambling, it is not possible to clearly distinguish HD scrambling from the expected deuterium uptake based on a hydrogen accessibility model. The capability of the IMS-HDX-MS/MS approach to provide relevant details about ion structure is discussed. Additionally, the ability to extend the approach for locating protonation sites on positively-charged ions is presented.

  9. Quantum Monte Carlo study of hard-core bosons in a pyrochlore lattice with six-site ring-exchange interactions

    NASA Astrophysics Data System (ADS)

    Tieman, Catherine; Rousseau, Valery

    Highly frustrated quantum systems on lattices can exhibit a wide variety of phases. In addition to the usual Mott insulating and superfluid phases, these systems can also produce some so-called ``exotic phases'', such as super-solid and valence-bond-solid phases. An example of particularly frustrated lattice is the pyrochlore structure, which is formed by corner-sharing tetrahedrons. Many real materials adopt this structure, for instance the crystal Cd2 Re2O7 , which exhibits superconducting properties. However, the complex structure of these materials combined with the complexity of the dominant interactions that describe them makes their analytical study difficult. Also, approximate methods, such as mean-field theory, fail to give a correct description of these systems. In this work, we report on the first exact quantum Monte Carlo study of a model of hard-core bosons in a pyrochlore lattice with six-site ring-exchange interactions, using the Stochastic Green Function (SGF) algorithm. We analyze the superfluid density and the structure factor as functions of the filling and ring-exchange interaction strength, and we map out the ground state phase diagram.

  10. The role of mosquito olfaction in oviposition site location and in the avoidance of unsuitable hosts.

    PubMed

    Pickett, J A; Woodcock, C M

    1996-01-01

    Developments in the exploitation of mosquito olfaction are traced, in collaborative studies with various groups, from the first identification of a mosquito pheromone through to a discussion of non-host avoidance. The characterization of the oviposition pheromone for mosquitoes in the genus Culex, e.g. Culex quinquefasciatus, as a novel chiral lactone ester provided the impetus for a number of sophisticated asymmetric syntheses and economical large-scale routes to racemic products. The latter have provided material for successful field trials in three continents. During the course of this field work, we obtained evidence that semiochemicals originating directly from the oviposition site are essential for activity of the oviposition pheromone. Recent studies are elucidating the nature of these agents and their geographical variability. Initially, we used synthetic oviposition pheromone to attract mosquitoes to sites treated with a biorational larvicide. However, recyclable biological control agents offer better prospects for resource-poor regions. A biotechnological approach to pheromone production has been devised involving the generation of inexpensive starting materials by the cultivation of a higher plant. New studies on dipterous pests feeding on farm animals indicate a semiochemically based mechanism by which unsuitable individuals within the host species are avoided. There appears to be an analogous process in which mosquitoes avoid certain potential human hosts, thereby raising prospects for the development of novel, rationally identified repellents once the semiochemical/olfactory interactions have been fully elucidated.

  11. Chromosomal location of 18S and 5S rDNA sites in Triportheus fish species (Characiformes, Characidae)

    PubMed Central

    2009-01-01

    The location of 18S and 5S rDNA sites was determined in eight species and populations of the fish genus Triportheus by using fluorescent in situ hybridization (FISH). The males and females of all species had 2n = 52 chromosomes and a ZZ/ZW sex chromosome system. A single 18S rDNA site that was roughly equivalent to an Ag-NOR was detected on the short arms of a submetacentric pair in nearly all species, and up to two additional sites were also observed in some species. In addition, another 18S rDNA cluster was identified in a distal region on the long arms of the W chromosome; this finding corroborated previous evidence that this cluster would be a shared feature amongst Triportheus species. In T. angulatus, a heterozygotic paracentric inversion involving the short arms of one homolog of a metacentric pair was associated with NORs. The 5S rDNA sites were located on the short arms of a single submetacentric chromosomal pair, close to the centromeres, except in T. auritus, which had up to ten 5S rDNA sites. The 18S and 5S rDNA sites were co-localized and adjacent on the short arms of a chromosomal pair in two populations of T. nematurus. Although all Triportheus species have a similar karyotypic macrostructure, the results of this work show that in some species ribosomal genes may serve as species-specific markers when used in conjunction with other putatively synapomorphic features. PMID:21637644

  12. Symmetries of migration related segments of all [001] coincidence site lattice tilt boundaries in (001) projections for all holohedral cubic materials

    SciTech Connect

    Moeck, Peter; York, Bryant W.; Browning, Nigel D.

    2014-09-11

    Utilizing bicrystallography in two dimensions (2D), the symmetries of migration related segments of Coincidence Site Lattice (CSL) boundaries are derived for projections along their [001] tilt axis in grain boundaries of crystalline materials that possess the holohedral point symmetry of the cubic system (i.e. m3m). These kinds of “edge-on” projections are typical for atomic resolution imaging of such tilt boundaries with Transmission Electron Microscopes (TEM). This fact facilitates the visual confirmation of our predictions by recently published Zcontrast scanning TEM investigations [H. Yang et al., Phil. Mag. 93 (2013) 1219] and many other TEM studies.

  13. The location of the site of energy release in a solar X-ray subflare

    NASA Technical Reports Server (NTRS)

    Petrasso, R. D.; Kahler, S. W.; Krieger, A. S.; Silk, J. K.; Vaiana, G. S.

    1975-01-01

    A rapid sequence of high-resolution X-ray photographs was obtained by the S-054 X-ray Telescope Experiment on Skylab on 1973 September 1. During the course of this observation, photographs were obtained of a flarelike brightening in a simple, bipolar active region. Analysis reveals the following facts. The event had the form of a small, elongated bright feature whose narrowest dimension was less than seconds of arc. The brightness peak of the flarelike brightening was located within seconds of arc of the center of brightness of a preexisting loop structure that crossed the magnetic neutral line. This loop was observed to brighten gradually beginning approximately 10 minutes prior to the flarelike event. During the rise of the event, the 2-17 A X-ray brightness of the center of the subflare core rose by over a factor of 10 in a time period of 196 seconds or less.

  14. Comparison of Magnetospheric Multiscale Ion Jet Signatures with Predicted Reconnection Site Locations at the Magnetopause

    NASA Technical Reports Server (NTRS)

    Petrinec, S. M.; Burch, J. L.; Fuselier, S. A.; Gomez, R. G.; Lewis, W.; Trattner, K. J.; Ergun, R.; Mauk, B.; Pollock, C. J.; Schiff, C.; Strangeway, R. J.; Russell, C. T.; Phan, T.-D.; Young, D.

    2016-01-01

    Magnetic reconnection at the Earths magnetopause is the primary process by which solar wind plasma and energy gains access to the magnetosphere. One indication that magnetic reconnection is occurring is the observation of accelerated plasma as a jet tangential to the magnetopause. The direction of ion jets along the magnetopause surface as observed by the Fast Plasma Instrument (FPI) and the Hot Plasma Composition Analyzer (HPCA) instrument on board the recently launched Magnetospheric Multiscale (MMS) set of spacecraft is examined. For those cases where ion jets are clearly discerned, the direction of origin compares well statistically with the predicted location of magnetic reconnection using convected solar wind observations in conjunction with the Maximum Magnetic Shear model.

  15. Comparison of Magnetospheric Multiscale Ion Jet Signatures with Predicted Reconnection Site Locations at the Magnetopause

    NASA Technical Reports Server (NTRS)

    Petrinec, S. M.; Burch, J. L.; Fuselier, S. A.; Gomez, R. G.; Lewis, W.; Trattner, K. J.; Ergun, R.; Mauk, B.; Pollock, C. J.; Schiff, C.; hide

    2016-01-01

    Magnetic reconnection at the Earths magnetopause is the primary process by which solar wind plasma and energy gains access to the magnetosphere. One indication that magnetic reconnection is occurring is the observation of accelerated plasma as a jet tangential to the magnetopause. The direction of ion jets along the magnetopause surface as observed by the Fast Plasma Instrument (FPI) and the Hot Plasma Composition Analyzer (HPCA) instrument on board the recently launched Magnetospheric Multiscale (MMS) set of spacecraft is examined. For those cases where ion jets are clearly discerned, the direction of origin compares well statistically with the predicted location of magnetic reconnection using convected solar wind observations in conjunction with the Maximum Magnetic Shear model.

  16. Locating the optimal internal jugular target site for central venous line placement.

    PubMed

    Giordano, Chris R; Murtagh, Kevin R; Mills, Jaime; Deitte, Lori A; Rice, Mark J; Tighe, Patrick J

    2016-09-01

    Historically, the placement of internal jugular central venous lines has been accomplished by using external landmarks to help identify target-rich locations in order to steer clear of dangerous structures. This paradigm is largely being displaced, as ultrasound has become routine practice, raising new considerations regarding target locations and risk mitigation. Most human anatomy texts depict the internal jugular vein as a straight columnar structure that exits the cranial vault the same size that it enters the thoracic cavity. We dispute the notion that the internal jugulars are cylindrical columns that symmetrically descend into the thoracic cavity, and purport that they are asymmetric conical structures. The primary aim of this study was to evaluate 100 consecutive adult chest and neck computed tomography exams that were imaged at an inpatient hospital. We measured the internal jugular on the left and right sides at three different levels to look for differences in size as the internal jugular descends into the thoracic cavity. We revealed that as the internal jugular descends into the thorax, the area of the vessel increases and geometrically resembles a conical structure. We also reconfirmed that the left internal jugular is smaller than the right internal jugular. Understanding that the largest target area for central venous line placement is the lower portion of the right internal jugular vein will help to better target vascular access for central line placement. This is the first study the authors are aware of that depicts the internal jugular as a conical structure as opposed to the commonly depicted symmetrical columnar structure frequently illustrated in anatomy textbooks. This target area does come with additional risk, as the closer you get to the thoracic cavity, the greater the chances for lung injury. Copyright © 2016 Elsevier Inc. All rights reserved.

  17. Site Characterization of the Source Physics Experiment Phase II Location Using Seismic Reflection Data

    SciTech Connect

    Sexton, Emily; Snelson, Catherine M; Chipman, Veraun D; Emer, Dudley; White, Bob; Emmit, Ryan; Wright, Al; Drellack, Sigmund; Huckins-Gang, Heather; Mercadante, Jennifer; Floyd, Michael; McGowin, Chris; Cothrun, Chris; Bonal, Nedra

    2013-12-05

    An objective of the Source Physics Experiment (SPE) is to identify low-yield nuclear explosions from a regional distance. Low-yield nuclear explosions can often be difficult to discriminate among the clutter of natural and man-made explosive events (e.g., earthquakes and mine blasts). The SPE is broken into three phases. Phase I has provided the first of the physics-based data to test the empirical models that have been used to discriminate nuclear events. The Phase I series of tests were placed within a highly fractured granite body. The evolution of the project has led to development of Phase II, to be placed within the opposite end member of geology, an alluvium environment, thereby increasing the database of waveforms to build upon in the discrimination models. Both the granite and alluvium sites have hosted nearby nuclear tests, which provide comparisons for the chemical test data. Phase III of the SPE is yet to be determined.

  18. Oligosaccharyltransferase directly binds to ribosome at a location near the translocon-binding site

    SciTech Connect

    Harada, Y.; Li, H.; Li, Hua; Lennarz, W. J.

    2009-04-28

    Oligosaccharyltransferase (OT) transfers high mannose-type glycans to the nascent polypeptides that are translated by the membrane-bound ribosome and translocated into the lumen of the endoplasmic reticulum through the Sec61 translocon complex. In this article, we show that purified ribosomes and OT can form a binary complex with a stoichiometry of {approx}1 to 1 in the presence of detergent. We present evidence that OT may bind to the large ribosomal subunit near the site where nascent polypeptides exit. We further show that OT and the Sec61 complex can simultaneously bind to ribosomes in vitro. Based on existing data and our findings, we propose that cotranslational translocation and N-glycosylation of nascent polypeptides are mediated by a ternary supramolecular complex consisting of OT, the Sec61 complex, and ribosomes.

  19. Surface wave site characterization at 27 locations near Boston, Massachusetts, including 2 strong-motion stations

    USGS Publications Warehouse

    Thompson, Eric M.; Carkin, Bradley A.; Baise, Laurie G.; Kayen, Robert E.

    2014-01-01

    The geotechnical properties of the soils in and around Boston, Massachusetts, have been extensively studied. This is partly due to the importance of the Boston Blue Clay and the extent of landfill in the Boston area. Although New England is not a region that is typically associated with seismic hazards, there have been several historical earthquakes that have caused significant ground shaking (for example, see Street and Lacroix, 1979; Ebel, 1996; Ebel, 2006). The possibility of strong ground shaking, along with heightened vulnerability from unreinforced masonry buildings, motivates further investigation of seismic hazards throughout New England. Important studies that are pertinent to seismic hazards in New England include source-parameter studies (Somerville and others, 1987; Boore and others, 2010), wave-propagation studies (Frankel, 1991; Viegas and others, 2010), empirical ground-motion prediction equations (GMPE) for computing ground-motion intensity (Tavakoli and Pezeshk, 2005; Atkinson and Boore, 2006), site-response studies (Hayles and others, 2001; Ebel and Kim, 2006), and liquefaction studies (Brankman and Baise, 2008). The shear-wave velocity (VS) profiles collected for this report are pertinent to the GMPE, site response, and liquefaction aspects of seismic hazards in the greater Boston area. Besides the application of these data for the Boston region, the data may be applicable throughout New England, through correlations with geologic units (similar to Ebel and Kim, 2006) or correlations with topographic slope (Wald and Allen, 2007), because few VS measurements are available in stable tectonic regions.Ebel and Hart (2001) used felt earthquake reports to infer amplification patterns throughout the greater Boston region and noted spatial correspondence with the dominant period and amplification factors obtained from ambient noise (horizontal-to-vertical ratios) by Kummer (1998). Britton (2003) compiled geotechnical borings in the area and produced a

  20. The effectiveness of ground-penetrating radar surveys in the location of unmarked burial sites in modern cemeteries

    NASA Astrophysics Data System (ADS)

    Fiedler, Sabine; Illich, Bernhard; Berger, Jochen; Graw, Matthias

    2009-07-01

    Ground-penetration radar (GPR) is a geophysical method that is commonly used in archaeological and forensic investigations, including the determination of the exact location of graves. Whilst the method is rapid and does not involve disturbance of the graves, the interpretation of GPR profiles is nevertheless difficult and often leads to incorrect results. Incorrect identifications could hinder criminal investigations and complicate burials in cemeteries that have no information on the location of previously existing graves. In order to increase the number of unmarked graves that are identified, the GPR results need to be verified by comparing them with the soil and vegetation properties of the sites examined. We used a modern cemetery to assess the results obtained with GPR which we then compared with previously obtained tachymetric data and with an excavation of the graves where doubt existed. Certain soil conditions tended to make the application of GPR difficult on occasions, but a rough estimation of the location of the graves was always possible. The two different methods, GPR survey and tachymetry, both proved suitable for correctly determining the exact location of the majority of graves. The present study thus shows that GPR is a reliable method for determining the exact location of unmarked graves in modern cemeteries. However, the method did not allow statements to be made on the stage of decay of the bodies. Such information would assist in deciding what should be done with graves where ineffective degradation creates a problem for reusing graves following the standard resting time of 25 years.

  1. Dynamic properties of the haptenic site of lipid haptens in phosphatidylcholine membranes. Their relation to the phase transition of the host lattice.

    PubMed Central

    Takeshita, K.; Utsumi, H.; Hamada, A.

    1987-01-01

    The relation between the dynamic properties of the haptenic site of lipid haptens and the phase transition of the host lattice was investigated using head group spin-labeled phosphatidylethanolamines, that is, spin-label lipid haptens (Brûlet, P., and H. M. McConnell, 1976, Proc. Natl. Acad. Sci. USA., 73:2977-2981; Brûlet, P., and H. M. McConnell, 1977, Biochemistry, 16:1209-1217). The electron spin resonance (ESR) spectra of the lipid haptens in liposomal membranes showed three narrow resonance lines, whose widths and hyperfine splitting values suggested that the haptenic site, i.e., the spin-label moiety, should be exposed in the water phase. The line width of each peak depended on the host lipid species and on the incubation temperature. A temperature study using dipalmitoylphosphatidylcholine (DPPC) liposomes showed that the dynamic properties of the haptenic site were related to the main phase transition and the subphase transition of the host lattice but not to the prephase transition. The angular amplitudes of the tumbling motion of the haptenic site were estimated using oriented multibilayer systems. The angular amplitude of dipalmitoyl-phosphatidyl-N-[[N-(1-oxyl-2,2,6, 6-tetramethyl-4-piperidinyl)-carbamoyl]-methyl]-ethanolamine in DPPC membranes was 63 degrees at 2 degrees C, and it increased slightly with an increase in temperature regardless of the phase transition of the host lattice. The value for egg phosphatidylcholine (PC) at 25 degrees C was the same as for DPPC above its main phase transition temperature. Rotational correlation time analysis showed that the axial rotation of the haptenic site was preferable to the tumbling motion of the rotational axis, and the predominance depended on the phase transition, Lc----L beta' and P beta'----L alpha. Elongation of the spacer arm between the haptenic site and phosphate increased the angular amplitude of the tumbling motion but reduced the effect of the host lattice. Spin-label lipid haptens with

  2. Risk assessment of soil-based exposures to plutonium at experimental sites located on the Nevada Test Site and adjoining areas

    SciTech Connect

    Layton, D.W.; Anspaugh, L.R.; Bogen, K.T.; Straume, T.

    1993-06-01

    In the late 1950s and early 1960s, a series of tests was conducted at or near the Nevada Test Site to study issues involving plutonium-bearing devices. These tests resulted in the dispersal of about 5 TBq of {sup 239,240}Pu on the surficial soils at the test locations. Access to the sites is strictly controlled; therefore, it does not constitute a threat to human health at the present time. However, because the residual {sup 239} Pu decays slowly (half-life of 24,110 y), the sites could indeed represent a long-term hazard if they are not remediated and if institutional controls are lost. To investigate the magnitude of the potential health risks for this no-remediation case, we defined three basic exposure scenarios that could bring individuals in contact with {sup 239,240}Pu at the sites: (1) a resident living in a subdivision located at a test site, (2) a resident farmer, and (3) a worker at a commercial facility. Our screening analyses indicated that doses to organs are dominated by the intemal deposition of Pu via the inhalation pathway, and thus our risk assessment focused on those factors that affect inhalation exposures and associated doses, including inhalation rates, activity patterns, tenure at a residence or occupation, indoor/outdoor air relationships, and resuspension outdoors. Cancer risks were calculated as a function of lifetime cumulative doses to the key target organs (i.e., bone surface, liver, and lungs) and risk factors for those organs. Uncertainties in the predicted cancer risks were analyzed using Monte-Carlo simulations of the probability distributions used to represent assessment parameters. The principal sources of uncertainty in the estimated risks were population mobility, the relationship between indoor and outdoor contaminant levels, and the dose and risk factors for bone, liver, and lung.

  3. Location of Promoter and Operator Sites in the Biotin Gene Cluster of Escherichia coli

    PubMed Central

    Cleary, Paul P.; Campbell, Allan; Chang, Robin

    1972-01-01

    Biotin independence in E. coli requires five closely linked genes, bioA, bioB, bioF, bioC, and bioD. The residual gene activity of deletion mutants has been studied by complementation and enzyme assays. Deletion of the left end of the bioA gene does not impair expression of the remaining genes, but deletions from the left extending into bioB abolish all gene expression. Nonsense mutations in bioB reduce expression of bioC, bioF, and bioD. Therefore, the four genes, bioB, bioF, bioC, and bioD, are transcribed as a unit from left to right, from a promotor located between bioA and bioB. Expression of the bio genes is repressible by added biotin. Deletions removing the left end of bioA do not affect repressibility of bioD. Therefore the operator, as well as the promoter, lie to the right of bioA. One deletion that removes bioA, bioB, and bioF renders the bioD gene constitutive, presumably by fusion to an unknown operon. Therefore, the operator lies to the left of bioC. PMID:4559599

  4. AN EXPERIMENT TO LOCATE THE SITE OF TeV FLARING IN M87

    SciTech Connect

    Harris, D. E.; Massaro, F.; Cheung, C. C.; Horns, D.; Raue, M.; Stawarz, L.; Wagner, S.; Colin, P.; Wagner, R.; Mazin, D.; Beilicke, M.; LeBohec, S.; Hui, M.; Mukherjee, R.

    2011-12-20

    We describe a Chandra X-ray target-of-opportunity project designed to isolate the site of TeV flaring in the radio galaxy M87. To date, we have triggered the Chandra observations only once (2010 April) and by the time of the first of our nine observations, the TeV flare had ended. However, we found that the X-ray intensity of the unresolved nucleus was at an elevated level for our first observation. Of the more than 60 Chandra observations we have made of the M87 jet covering nine years, the nucleus was measured at a comparably high level only three times. Two of these occasions can be associated with TeV flaring, and at the time of the third event, there were no TeV monitoring activities. From the rapidity of the intensity drop of the nucleus, we infer that the size of the emitting region is of order a few light days Multiplication-Sign the unknown beaming factor; comparable to the same sort of estimate for the TeV emitting region. We also find evidence of spectral evolution in the X-ray band which seems consistent with radiative losses affecting the non-thermal population of the emitting electrons within the unresolved nucleus.

  5. An Experiment to Locate the Site of TeV Flaring in M87

    SciTech Connect

    Harris, D.E.; Massaro, F.; Cheung, C.C.; Horns, D.; Raue, M.; Stawarz, L.; Wagner, S.; Colin, P.; Mazin, D.; Wagner, R.; Beilicke, M.; LeBohec, S.; Hui, M.; Mukherjee, R.; /Barnard Coll.

    2012-05-18

    We describe a Chandra X-ray target-of-opportunity project designed to isolate the site of TeV flaring in the radio galaxy M87. To date, we have triggered the Chandra observations only once (2010 April) and by the time of the first of our nine observations, the TeV flare had ended. However, we found that the X-ray intensity of the unresolved nucleus was at an elevated level for our first observation. Of the more than 60 Chandra observations we have made of the M87 jet covering nine years, the nucleus was measured at a comparably high level only three times. Two of these occasions can be associated with TeV flaring, and at the time of the third event, there were no TeV monitoring activities. From the rapidity of the intensity drop of the nucleus, we infer that the size of the emitting region is of order a few light days x the unknown beaming factor; comparable to the same sort of estimate for the TeV emitting region. We also find evidence of spectral evolution in the X-ray band which seems consistent with radiative losses affecting the non-thermal population of the emitting electrons within the unresolved nucleus.

  6. Engineering study of 50 miscellaneous inactive underground radioactive waste tanks located at the Hanford Site, Washington

    SciTech Connect

    Freeman-Pollard, J.R.

    1994-03-02

    This engineering study addresses 50 inactive underground radioactive waste tanks. The tanks were formerly used for the following functions associated with plutonium and uranium separations and waste management activities in the 200 East and 200 West Areas of the Hanford Site: settling solids prior to disposal of supernatant in cribs and a reverse well; neutralizing acidic process wastes prior to crib disposal; receipt and processing of single-shell tank (SST) waste for uranium recovery operations; catch tanks to collect water that intruded into diversion boxes and transfer pipeline encasements and any leakage that occurred during waste transfer operations; and waste handling and process experimentation. Most of these tanks have not been in use for many years. Several projects have, been planned and implemented since the 1970`s and through 1985 to remove waste and interim isolate or interim stabilize many of the tanks. Some tanks have been filled with grout within the past several years. Responsibility for final closure and/or remediation of these tanks is currently assigned to several programs including Tank Waste Remediation Systems (TWRS), Environmental Restoration and Remedial Action (ERRA), and Decommissioning and Resource Conservation and Recovery Act (RCRA) Closure (D&RCP). Some are under facility landlord responsibility for maintenance and surveillance (i.e. Plutonium Uranium Extraction [PUREX]). However, most of the tanks are not currently included in any active monitoring or surveillance program.

  7. Microwave and X-ray observations of delayed brightenings at sites remote from the primary flare locations

    SciTech Connect

    Nakajima, H.; Dennis, B.R.; Hoyng, P.; Nelson, G.; Kosugi, T.; Kai, K.

    1984-08-01

    Five examples of solar flares observed with the 17-GHz interferometer at Nobeyama in which a secondary microwave burst occurred at a distance of 100,000 km to 1,000,000 km from the primary flare site are presented. The secondary microwave burst in all five cases had a similar time profile to the primary burst with a delay of 2 to 25 s. The velocity of a triggering agent inferred from this delay and spatial separation is 10,000 km to 100,000 km/s. The intensity of the secondary burst was a factor of 3 to 25 smaller than that of the primary burst in all events except for one case in which it was a factor of 2 larger. The polarization degree of the secondary burst at 17 GHz was 35%, significantly higher than the average value for typical impulsive bursts. Two of the events were accompanied by meterwave type III/V bursts located high in the corona between the primary and secondary sites. For two of the other events, X-ray images of he secondary source were obtained with the hard-X-ray imaging spectrometer on the Solar Maximum Mission. These observations strongly suggest that the distant microwave bursts were produced by electrons with energies of 10 keV to 100 keV which were channeled along a huge loop from the main flare site to the remote location.

  8. Microwave and X-ray observations of delayed brightenings at sites remote from the primary flare locations

    NASA Technical Reports Server (NTRS)

    Nakajima, H.; Dennis, B. R.; Hoyng, P.; Nelson, G.; Kosugi, T.; Kai, K.

    1984-01-01

    Five examples of solar flares observed with the 17-GHz interferometer at Nobeyama in which a secondary microwave burst occurred at a distance of 100,000 km to 1,000,000 km from the primary flare site are presented. The secondary microwave burst in all five cases had a similar time profile to the primary burst with a delay of 2 to 25 s. The velocity of a triggering agent inferred from this delay and spatial separation is 10,000 km to 100,000 km/s. The intensity of the secondary burst was a factor of 3 to 25 smaller than that of the primary burst in all events except for one case in which it was a factor of 2 larger. The polarization degree of the secondary burst at 17 GHz was 35%, significantly higher than the average value for typical impulsive bursts. Two of the events were accompanied by meterwave type III/V bursts located high in the corona between the primary and secondary sites. For two of the other events, X-ray images of he secondary source were obtained with the hard-X-ray imaging spectrometer on the Solar Maximum Mission. These observations strongly suggest that the distant microwave bursts were produced by electrons with energies of 10 keV to 100 keV which were channeled along a huge loop from the main flare site to the remote location.

  9. Subunit assembly and active site location in the structure of glutamate dehydrogenase.

    PubMed

    Baker, P J; Britton, K L; Engel, P C; Farrants, G W; Lilley, K S; Rice, D W; Stillman, T J

    1992-01-01

    The three-dimensional crystal structure of the NAD(+)-linked glutamate dehydrogenase from Clostridium symbiosum has been solved to 1.96 A resolution by a combination of isomorphous replacement and molecular averaging and refined to a conventional crystallographic R factor of 0.227. Each subunit in this multimeric enzyme is organised into two domains separated by a deep cleft. One domain directs the self-assembly of the molecule into a hexameric oligomer with 32 symmetry. The other domain is structurally similar to the classical dinucleotide binding fold but with the direction of one of the strands reversed. Difference Fourier analysis on the binary complex of the enzyme with NAD+ shows that the dinucleotide is bound in an extended conformation with the nicotinamide moiety deep in the cleft between the two domains. Hydrogen bonds between the carboxyamide group of the nicotinamide ring and the side chains of T209 and N240, residues conserved in all hexameric GDH sequences, provide a positive selection for the syn conformer of this ring. This results in a molecular arrangement in which the A face of the nicotinamide ring is buried against the enzyme surface and the B face is exposed, adjacent to a striking cluster of conserved residues including K89, K113, and K125. Modeling studies, correlated with chemical modification data, have implicated this region as the glutamate/2-oxoglutarate binding site and provide an explanation at the molecular level for the B type stereospecificity of the hydride transfer of GDH during the catalytic cycle.

  10. Metal levels in southern leopard frogs from the Savannah River Site: location and body compartment effects.

    PubMed

    Burger, J; Snodgrass, J

    2001-06-01

    Tadpoles have been proposed as useful bioindicators of environmental contamination; yet, recently it has been shown that metal levels vary in different body compartments of tadpoles. Metals levels are higher in the digestive tract of bullfrog (Rana catesbeiana) tadpoles, which is usually not removed during such analysis. In this paper we examine the heavy metal levels in southern leopard frog (R. utricularia) tadpoles from several wetlands at the Savannah River Site and test the null hypotheses that (1) there are no differences in metal levels in different body compartments of the tadpoles, including the digestive tract; (2) there are no differences in heavy metal levels among different wetlands; and (3) there are no differences in the ratio of metals in the tail/body and in the digestive tract/body as a function of metal or developmental stage as indicated by body weight. Variations in heavy metal levels were explained by wetland and body compartment for all metals and by tadpole weight for selenium and manganese. In all cases, levels of metals were higher in the digestive tract than in the body or tail of tadpoles. Metal levels were highest in a wetland that had been remediated and lowest in a wetland that was never a pasture or remediated (i.e., was truly undisturbed). Although tadpoles are sometimes eaten by fish and other aquatic predators, leopard frogs usually avoid laying their eggs in ponds with such predators. However, avian predators will eat them. These data suggest that tadpoles can be used as bioindicators of differences in metal levels among wetlands and as indicators of potential exposure for higher-trophic-level organisms, but that to assess effects on the tadpoles themselves, digestive tracts should be removed before analysis.

  11. Wigner Crystalization of a two dimensional electron gas in a magnetic field: single electrons versus electron pairs at the lattice sites

    NASA Astrophysics Data System (ADS)

    Taut, M. G.

    2001-03-01

    The ground state energy and the lowest excitations of a two dimensional Wigner crystal with one -- and two electrons per cell are investigated. In case of two electrons per lattice site, the interaction of the electrons within each cell is taken into account exactly (including exchange and the full Coulomb correlation effects). The interaction between the cells is in second order (dipole) van der Waals approximation. No further approximations are made, in particular Landau level mixing is accounted for. Therefore, our calculation comprises a supplementary description of the bubble phase in the special case of one and two electrons per bubble, as proposed by Koulakov, Fogler and Shklovskii in Phys.Rev.Lett. 76, 499 (1996) on the basis of a Hartree Fock calculation. The phase diagram shows for which filling factors and densities which phase: single electrons versus singlet or triplet pairs on the Wigner crystal lattice sites, is energetically favored. Comparison with other approximations for the Wigner crystal and with the Laughlin liquid is made as well.

  12. On the Location of the Acceleration Site for Energetic Helium-3 and Implications for Flare Models

    NASA Astrophysics Data System (ADS)

    Simnett, G. M.

    2008-12-01

    The wide variation in the 3He/4He ratio in solar energetic particle events is most plausibly interpreted in terms of two distinct acceleration mechanisms for helium nuclei, one of which favors 3He. 3He-rich events are associated with impulsive energetic electron events which have (at least) two distinct acceleration mechanisms. Logically one of these should accelerate both 3He and electrons. Based on the electron energy spectrum from 3He-rich events Kahler et al (1987) proposed that the acceleration region should be the high corona, possibly as high as 2 solar radii. Two further observations provide information on where the 3He acceleration might occur. First is the remarkable upper limit on the total 3He fluence (Ho et al, 2005, 2008) which strongly suggests a model where the acceleration process accelerates the majority of 3He ions within a finite reservoir, which can only be a high coronal loop structure. The second is that at quiet times, at 1AU, the 3He/4He ratio is 6-60 times enhanced over the corresponding slow solar wind value (Desai et al, 2006). Both observations indicate that the acceleration, which favors 3He, is occurring quasi-continuously in the high coronal structure, with some leakage into the interplanetary medium. Eventually the coronal structure is disrupted and the trapped population is either released into the interplanetary medium or dumped into the "flare" site to provide both energy and seed particles for further acceleration, but by a different process which does not preferentially accelerate 3He. In the former case there will not be a significant flare, but a 3He-rich event, an impulsive electron event, and perhaps a fast jet from one of the footpoints of the trapping structure. In the latter case there will be a significant flare, with a major coronal mass ejection, probably driving a shock, which produces a non-3He-rich event and a much longer and larger energetic particle event.

  13. Soil data for a vegetation gradient located at Bonanza Creek Long Term Ecological Research Site, interior Alaska

    USGS Publications Warehouse

    Manies, Kristen L.; Harden, Jennifer W.; Fuller, Christopher C.; Xu, Xiaomei; McGeehin, John P.

    2016-07-28

    Boreal soils play an important role in the global carbon cycle owing to the large amount of carbon stored within this northern region. To understand how carbon and nitrogen storage varied among different ecosystems, a vegetation gradient was established in the Bonanza Creek Long Term Ecological Research (LTER) site, located in interior Alaska. The ecosystems represented are a black spruce (Picea mariana)–feather moss (for example, Hylocomium sp.) forest ecosystem, a shrub-dominated ecosystem, a tussock-grass-dominated ecosystem, a sedge-dominated ecosystem, and a rich fen ecosystem. Here, we report the physical, chemical, and descriptive properties for the soil cores collected at these sites. These data have been used to calculate carbon and nitrogen accumulation rates on a long-term (decadal and century) basis (Manies and others, in press).

  14. 43 CFR 2806.38 - Can I combine multiple grants or leases for facilities located on one site into a single grant or...

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Can I combine multiple grants or leases for facilities located on one site into a single grant or lease? 2806.38 Section 2806.38 Public Lands... Communication Site Rights-Of-Way § 2806.38 Can I combine multiple grants or leases for facilities located on...

  15. Transient Protein-Protein Interaction of the SH3-Peptide Complex via Closely Located Multiple Binding Sites

    PubMed Central

    Hahn, Seungsoo; Kim, Dongsup

    2012-01-01

    Protein-protein interactions play an essential role in cellular processes. Certain proteins form stable complexes with their partner proteins, whereas others function by forming transient complexes. The conventional protein-protein interaction model describes an interaction between two proteins under the assumption that a protein binds to its partner protein through a single binding site. In this study, we improved the conventional interaction model by developing a Multiple-Site (MS) model in which a protein binds to its partner protein through closely located multiple binding sites on a surface of the partner protein by transiently docking at each binding site with individual binding free energies. To test this model, we used the protein-protein interaction mediated by Src homology 3 (SH3) domains. SH3 domains recognize their partners via a weak, transient interaction and are therefore promiscuous in nature. Because the MS model requires large amounts of data compared with the conventional interaction model, we used experimental data from the positionally addressable syntheses of peptides on cellulose membranes (SPOT-synthesis) technique. From the analysis of the experimental data, individual binding free energies for each binding site of peptides were extracted. A comparison of the individual binding free energies from the analysis with those from atomistic force fields gave a correlation coefficient of 0.66. Furthermore, application of the MS model to 10 SH3 domains lowers the prediction error by up to 9% compared with the conventional interaction model. This improvement in prediction originates from a more realistic description of complex formation than the conventional interaction model. The results suggested that, in many cases, SH3 domains increased the protein complex population through multiple binding sites of their partner proteins. Our study indicates that the consideration of general complex formation is important for the accurate description of

  16. On the location of the H+-extruding steps in site 2 of the mitochondrial electron transport chain.

    PubMed

    Alexandre, A; Galiazzo, F; Lehninger, A L

    1980-11-25

    The location of the H+-translocating reactions within energy-conserving Site 2 of the mitochondrial electron transport chain was evaluated from two sets of data. In the first, the H+/2e- ejection ratios and Ca2+/2e- uptake ratios were compared for electron flow from succinate dehydrogenase, whose active site is on the matrix side of the inner membrane and from glycerol phosphate dehydrogenase, whose active site is on the cytosolic side. In intact rat liver mitochondria both substrates yielded H+/2e- ejection ratios close to 4.0 and Ca2+/2e- uptake ratios close to 1.0 during antimycin-sensitive reduction of ferricyanide. With rat liver mitoplasts and ferricytochrome c as electron acceptor, both substrates again gave the same stoichiometric ratios. The second approach involved determination of the sidedness of H+ formation during electron flow from succinate to ferricyanide via bypass of the antimycin block of the cytochrome b.c1 complex provided by N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD), under conditions in which the TMPD-TMPD+ couple does not act as a membrane-penetrating protonophore. Electron flow in this system was inhibited by 2-then-oyltrifluoroacetone, indicating that TMPD probably accepts electrons from ubiquinol. The 2 H+ formed in this system were not delivered into the matrix but appeared directly in the medium in the absence of a protonophore. To accommodate the available evidence on Site 2 substrates, it is concluded that the substrate hydrogens are first transferred to ubiquinone, 2 H+ per 2e then appear in the medium by protolytic dehydrogenation of a species of ubiquinol or ubiquinol-protein having the appropriate sidedness (designated Site 2A), and the other 2 H+ are translocated from the matrix to the medium on passage of 2e- through the cytochrome b x c1 complex (designated Site 2B).

  17. Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models.

    PubMed

    Liu, Zhirong; Chan, Hue Sun

    2008-04-14

    We develop two classes of Monte Carlo moves for efficient sampling of wormlike DNA chains that can have significant degrees of supercoiling, a conformational feature that is key to many aspects of biological function including replication, transcription, and recombination. One class of moves entails reversing the coordinates of a segment of the chain along one, two, or three axes of an appropriately chosen local frame of reference. These transformations may be viewed as a generalization, to the continuum, of the Madras-Orlitsky-Shepp algorithm for cubic lattices. Another class of moves, termed T+/-2, allows for interconversions between chains with different lengths by adding or subtracting two beads (monomer units) to or from the chain. Length-changing moves are generally useful for conformational sampling with a given site juxtaposition, as has been shown in previous lattice studies. Here, the continuum T+/-2 moves are designed to enhance their acceptance rate in supercoiled conformations. We apply these moves to a wormlike model in which excluded volume is accounted for by a bond-bond repulsion term. The computed autocorrelation functions for the relaxation of bond length, bond angle, writhe, and branch number indicate that the new moves lead to significantly more efficient sampling than conventional bead displacements and crankshaft rotations. A close correspondence is found in the equilibrium ensemble between the map of writhe computed for pair of chain segments and the map of site juxtapositions or self-contacts. To evaluate the more coarse-grained freely jointed chain (random-flight) and cubic lattice models that are commonly used in DNA investigations, twisting (torsional) potentials are introduced into these models. Conformational properties for a given superhelical density sigma may then be sampled by computing the writhe and using White's formula to relate the degree of twisting to writhe and sigma. Extensive comparisons of contact patterns and knot

  18. Pattern Recognition of Adsorbing HP Lattice Proteins

    NASA Astrophysics Data System (ADS)

    Wilson, Matthew S.; Shi, Guangjie; Wüst, Thomas; Landau, David P.; Schmid, Friederike

    2015-03-01

    Protein adsorption is relevant in fields ranging from medicine to industry, and the qualitative behavior exhibited by course-grained models could shed insight for further research in such fields. Our study on the selective adsorption of lattice proteins utilizes the Wang-Landau algorithm to simulate the Hydrophobic-Polar (H-P) model with an efficient set of Monte Carlo moves. Each substrate is modeled as a square pattern of 9 lattice sites which attract either H or P monomers, and are located on an otherwise neutral surface. The fully enumerated set of 102 unique surfaces is simulated with each protein sequence. A collection of 27-monomer sequences is used- each of which is non-degenerate and protein-like. Thermodynamic quantities such as the specific heat and free energy are calculated from the density of states, and are used to investigate the adsorption of lattice proteins on patterned substrates. Research supported by NSF.

  19. E-ELT Site Chosen - World's Biggest Eye on the Sky to be Located on Armazones, Chile

    NASA Astrophysics Data System (ADS)

    2010-04-01

    pollution and mining activities. Notes [1] The independent E-ELT Site Selection Advisory Committee (SSAC) has been analysing results from several possible sites worldwide in great detail. Similar efforts have been carried out by the Thirty-Meter Telescope (TMT) site selection team from the US. For the sake of efficiency, the sites pre-selected by the TMT team (all in North and South America) were not studied by the SSAC, as the TMT team shared their data with the SSAC. Two of the sites on the SSAC short list, including Armazones, were on the TMT list. [2] The full ESO Council Resolution reads as follow: Resolution of ESO Council on the Baseline Site for the E-ELT Recognising * the very clear recommendation from the Site Selection Advisory Committee that the E-ELT should be located on Cerro Armazones in Northern Chile * the considerable scientific synergy that would result between the E-ELT and future facilities in the Southern Hemisphere, most notably ALMA and SKA * the operational and scientific synergies with Paranal that would result and expressing its warmest appreciation for * the very generous offers from Spain and Chile to host the E-ELT * the very considerable contributions to the quality and depth of the discussion on the siting of the E-ELT made by Chile and Spain in the course of developing their offers; Council has concluded that the overriding driver for the decision on the location of the E-ELT should be the scientific quality of the site. The scientific qualities of Cerro Armazones and the positive impact that locating the E-ELT there will have on the future scientific leadership of ESO are sufficiently compelling to outweigh the very substantial offer made by Spain. Council has therefore resolved to approve the recommendation of the Director General to adopt Cerro Armazones in Chile as the baseline site for the E-ELT. Council noted that this decision is essential for the completion of the construction proposal for decision at a later date. More information

  20. 43 CFR 3832.91 - How do I amend a mining claim or site location if it exceeds the size limitations?

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... location if it exceeds the size limitations? 3832.91 Section 3832.91 Public Lands: Interior Regulations... or site location if it exceeds the size limitations? (a) You may correct defects in your location of... public lands. It was developed to determine maximum allowable acreage for land entries (placer claims...

  1. 43 CFR 3832.91 - How do I amend a mining claim or site location if it exceeds the size limitations?

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... location if it exceeds the size limitations? 3832.91 Section 3832.91 Public Lands: Interior Regulations... or site location if it exceeds the size limitations? (a) You may correct defects in your location of... public lands. It was developed to determine maximum allowable acreage for land entries (placer claims...

  2. An Inter-Comparison of Two Independent Site Test Interferometers Located in Goldstone, California: Initial Study Results

    NASA Technical Reports Server (NTRS)

    Morabito, David; D'Addario, Larry; Acosta, Roberto J.; Nessel, James A.

    2012-01-01

    Site Test Interferometers (STIs) have been deployed at two different locations at the NASA Deep Space Network (DSN) tracking complex in Goldstone, California. An STI measures the difference in path length between a geostationary satellite and two antennas on the Earth, producing a measure of atmospheric phase fluctuations over spatial distances comparable to those between elements of possible microwave phased arrays. The purposes of the Goldstone STIs are to assess the suitability of Goldstone as an array site and to statistically characterize atmospheric induced delay fluctuations for application to future array scenarios.The two STI's are separated by 13 km across the Goldstone complex. Each instrument is composed of two small-diameter antennas and associated electronics separated by approx. 200 meters in a principally east-west configuration. The antennas continuously observe signals emitted by geo-stationary satellites and produce data that contain information on the phase difference between signals received by both antennas. The fluctuation in delay (or path length difference) statistics derived from these data sets can be used to infer power loss for particular array configurations.We report on a comparison of the root mean square (RMS) phase delay statistics estimated over 10-minute intervals between the two Goldstone STIs. We have achieved good statistical agreement between the data acquired from the two STIs, given that each instrument is observing different satellites, at different frequencies, over different baseline lengths, with very different implementations, and are located 13 km apart in widely separated terrain at different geodetic altitudes.

  3. An Inter-Comparison of Two Independent Site Test Interferometers Located in Goldstone, California: Initial Study Results

    NASA Technical Reports Server (NTRS)

    Morabito, David; D'Addario, Larry; Acosta, Roberto J.; Nessel, James A.

    2012-01-01

    Site Test Interferometers (STIs) have been deployed at two different locations at the NASA Deep Space Network (DSN) tracking complex in Goldstone, California. An STI measures the difference in path length between a geostationary satellite and two antennas on the Earth, producing a measure of atmospheric phase fluctuations over spatial distances comparable to those between elements of possible microwave phased arrays. The purposes of the Goldstone STIs are to assess the suitability of Goldstone as an array site and to statistically characterize atmospheric induced delay fluctuations for application to future array scenarios.The two STI's are separated by 13 km across the Goldstone complex. Each instrument is composed of two small-diameter antennas and associated electronics separated by approx. 200 meters in a principally east-west configuration. The antennas continuously observe signals emitted by geo-stationary satellites and produce data that contain information on the phase difference between signals received by both antennas. The fluctuation in delay (or path length difference) statistics derived from these data sets can be used to infer power loss for particular array configurations.We report on a comparison of the root mean square (RMS) phase delay statistics estimated over 10-minute intervals between the two Goldstone STIs. We have achieved good statistical agreement between the data acquired from the two STIs, given that each instrument is observing different satellites, at different frequencies, over different baseline lengths, with very different implementations, and are located 13 km apart in widely separated terrain at different geodetic altitudes.

  4. Multi-technique comparison of atmospheric parameters at the DORIS co-location sites during CONT14

    NASA Astrophysics Data System (ADS)

    Heinkelmann, Robert; Willis, Pascal; Deng, Zhiguo; Dick, Galina; Nilsson, Tobias; Soja, Benedikt; Zus, Florian; Wickert, Jens; Schuh, Harald

    2016-12-01

    The atmospheric parameters, zenith delays and gradients, obtained by the DORIS, GPS, VLBI, and numerical weather models, ECMWF and NCEP, are compared at five DORIS co-located sites during the 15 days of the CONT14 campaign from 2014-05-06 until 2014-05-20. Further examined are two different solutions of GPS, VLBI and NCEP: for GPS, a network solution comparable to the TIGA reprocessing analysis strategy and a precise point positioning solution, for VLBI, a least squares and a Kalman filtered and smoothed solution, and for NCEP two spatial resolutions, 0.5° and 1.0°, are tested. The different positions of the antenna reference points at co-location sites affect the atmospheric parameters and have to be considered prior to the comparison. We assess and discuss these differences, tropospheric ties, by comparing ray-traced atmospheric parameters obtained at the positions of the various antenna reference points. While ray-traced ZHD and ZWD at the co-located antennas significantly differ, the ray-traced gradients show only very small differences. Weather events can introduce larger disagreement between atmospheric parameters obtained at co-location sites. The various weather model solutions in general agree very well in providing tropospheric ties. The atmospheric parameters are compared using statistical methods, such as the mean difference and standard deviations with repect to a weighted mean value. While GPS and VLBI atmospheric parameters agree very well in general, the DORIS observations are in several cases not dense enough to achieve a comparable level of agreement. The estimated zenith delays from DORIS, however, are competitive with the other space geodetic techniques. If the DORIS observation geometry is insufficient for the estimation of an atmospheric gradient, less than three satellites observed during the definition interval, the DORIS atmospheric parameters degrade and show small quasi-periodic variations that correlate with the number of observations

  5. Organochlorine compounds in Purple Heron eggs (Ardea purpurea) nesting in sites located around a chlor-alkali plant (Ebro River).

    PubMed

    Huertas, David; Grimalt, Joan O; Jover, Lluís; Sanpera, Carola; Ruiz, Xavier

    2016-01-01

    Eggs of Purple Heron (Ardea purpurea) were collected from three sampled sites inside the Ebro River basin in years 2006 and 2007. These sites were located besides (Flix), upstream (Aiguabarreig) and downstream (Delta) a chlor-alkali plant. Organochlorine compounds (OCs) such as dichlorodiphenyltrichloroethanes (DDTs), polychlorobiphenyls (PCBs), polychlorostyrenes (PCSs), hexachlorobenzene (HCB), pentachlorobenzene (PeCB) and hexachlorocyclohexanes (HCHs) were analysed to assess what are the accumulation patterns of these compounds in aquatic migratory birds breeding in the area of influence of the emissions from this industrial installation. Comparison of the egg concentrations between the three sites show higher concentrations of compounds manufactured in the past in the factory (PCBs, p,p'-DDT) or by-products of OC synthesis (HCB, PeCB and PCSs) in Flix than in Aiguabarreig reflecting a clear influence from the emissions of the chlor-alkali plant. The eggs collected in the Ebro Delta showed higher concentrations of total DDTs (mainly p,p'-DDE) than in the reference site (Aiguabarreig) which could reflect past applications of this insecticide in the area for agriculture. In contrast, HCHs were found in higher concentrations in the Delta and Aiguabarreig than in the Flix Reservoir. These compounds have been used as insecticides in agriculture and were not manufactured in the chlor-alkali plant. The present results show that despite Purple Herons are migratory birds, the food web transfer of OCs during the breeding season is sufficient for the accumulation of these compounds in the eggs, leading to statistically significant concentration differences between sites. These differences are consistent with the emissions of these pollutants from industrial or agricultural sources to the aquatic environments. Some of the p,p'-DDE concentrations observed in the area nearby the chlor-alkali plant are above the threshold effects for reproductive impairment.

  6. Serine 71 of the glycoprotein HEF is located at the active site of the acetylesterase of influenza C virus.

    PubMed

    Herrler, G; Multhaup, G; Beyreuther, K; Klenk, H D

    1988-01-01

    The acetylesterase of influenza C virus has been reported recently to be inhibited by diisopropylfluorophosphate (DFP) [Muchmore EA, Varki A (1987) Science 236: 1293-1295]. As this inhibitor is known to bind covalently to the serine in the active site of serine esterases, we attempted to determine the serine in the active site of the influenza C acetylesterase. Incubation of purified influenza C virus with 3H-DFP resulted in the selective labelling of the influenza C glycoprotein HEF. The labelled glycoprotein was isolated from a SDS-polyacrylamide gel. Following reduction and carboxymethylation, tryptic peptides of HEF were prepared and analyzed by reversed phase HPLC. The peptide containing the 3H-DFP was subjected to sequence analysis. The amino acids determined from the NH2-terminus were used to locate the peptide on the HEF polypeptide. Radiosequencing revealed that 3H-DFP is attached to amino acid 17 of the tryptic peptide. These results indicate that serine 71 is the active-site serine of the acetylesterase of influenza C virus.

  7. Lattice topology dictates photon statistics.

    PubMed

    Kondakci, H Esat; Abouraddy, Ayman F; Saleh, Bahaa E A

    2017-08-21

    Propagation of coherent light through a disordered network is accompanied by randomization and possible conversion into thermal light. Here, we show that network topology plays a decisive role in determining the statistics of the emerging field if the underlying lattice is endowed with chiral symmetry. In such lattices, eigenmode pairs come in skew-symmetric pairs with oppositely signed eigenvalues. By examining one-dimensional arrays of randomly coupled waveguides arranged on linear and ring topologies, we are led to a remarkable prediction: the field circularity and the photon statistics in ring lattices are dictated by its parity while the same quantities are insensitive to the parity of a linear lattice. For a ring lattice, adding or subtracting a single lattice site can switch the photon statistics from super-thermal to sub-thermal, or vice versa. This behavior is understood by examining the real and imaginary fields on a lattice exhibiting chiral symmetry, which form two strands that interleave along the lattice sites. These strands can be fully braided around an even-sited ring lattice thereby producing super-thermal photon statistics, while an odd-sited lattice is incommensurate with such an arrangement and the statistics become sub-thermal.

  8. Roles of target site location and sequence complementarity in trans-acting siRNA formation in Arabidopsis.

    PubMed

    Zhang, Changqing; Ng, Danny W-K; Lu, Jie; Chen, Z Jeffrey

    2012-01-01

    In plants, many mRNAs and non-coding RNAs are cleaved by RNA-induced silencing complexes. After cleavage, only a limited number of RNAs are processed into trans-acting siRNAs (tasiRNAs). One reason is that 22 nt small RNAs, but not the more common 21 nt small RNAs, can efficiently trigger tasiRNA formation. The characteristics of the target transcripts may also affect tasiRNA production. Here we report the effects of target site location and sequence complementarity on tasiRNA formation. A synthetic sequence that included a miR173 target site and two siRNAs targeting an endogenous mRNA encoding PHYTOENE DESATURASE3 was introduced into a protein-coding (GFP) gene in the coding region or 3' UTR. tasiRNAs were generated in the transgenic seedlings, and the PDS3 mRNA level was reduced, leading to a photobleaching phenotype. It was found that tasiRNAs were most efficiently produced when the miR173 target site was placed immediately after the stop codon. Introducing premature stop codons caused a dramatic reduction of tasiRNAs and over-accumulation of 3' cleavage products, suggesting positive effects of translation on processing the 3' cleavage products into tasiRNAs. By systematically mutating the miR173 target site, we found that perfect complementarity between the 3' end of miR173 and the 5' end of the target sequence was crucial. Mismatches at that position abolished tasiRNA formation, but mismatches at the 5' end of miR173 had less effect. These data suggest important roles for translation and specific sequence complementarity in tasiRNA formation, providing new insights into tasiRNA biogenesis as well as a strategy for improving the efficiency of RNA interference (RNAi) using tasiRNAs. © 2011 The Authors. The Plant Journal © 2011 Blackwell Publishing Ltd.

  9. Location of smooth-muscle myosin and tropomyosin binding sites in the C-terminal 288 residues of human caldesmon.

    PubMed Central

    Huber, P A; Fraser, I D; Marston, S B

    1995-01-01

    We have produced nine recombinant fragments, H1 to H9, from a human cDNA that codes for the C-terminal 288 residues of caldesmon. The fragment H1, encompassing the 288 residues, is equivalent to domains 3 and 4 of caldesmon (amino acids 506-793 in human, 476-737 in the chicken gizzard sequence). It has been shown [Huber, Redwood, Avent, Tanner and Marston (1993) J. Muscle Res. Cell Motil. 14, 385-391] to bind to actin, Ca(2+)-calmodulin, tropomyosin and myosin. The fragments, H2 to H9, differ in length between 60 and 176 residues and cover the whole of domains 3 and 4 with many of the fragments overlapping. We have characterized the myosin and tropomyosin binding of these fragments. The binding of both tropomyosin and myosin is highly dependent on salt concentration, indicating the ionic nature of these interactions. The location of the myosin binding is an extended region encompassing the junction of domains 3/4 and domain 4a (residues 622-714, human; 566-657, chicken gizzard). Tropomyosin binds in a smaller region within domain 4a of caldesmon (residues 663-714, human; 606-657 chicken gizzard). We confirmed predictions based on sequence similarities of a tropomyosin binding site in domain 3 of caldesmon; however, this site bound to skeletal-muscle tropomyosin and had little affinity for the smooth-muscle tropomyosin isoform. None of the protein fragments H2-H9 retained the affinity of the parent fragment H1 for either myosin or tropomyosin. This indicates the need for several interaction sites scattered over an extended region to attain higher affinity. The regions interacting with caldesmon in both tropomyosin and myosin are coiled-coil structures. This is probably the reason for their shared interaction sites on caldesmon and their similar natures of binding. Images Figure 1 Figure 2 Figure 9 PMID:8526878

  10. Phase diagrams of the corner cubic Heisenberg model and its site-diluted version on a triangular lattice: Renormalization-group treatment

    NASA Astrophysics Data System (ADS)

    Nagai, Kiyoshi

    1985-02-01

    The global phase diagrams of the corner cubic anisotropic discrete-spin Heisenberg (CH) model and its site-diluted version (dCH) on a triangular lattice are investigated through the position-space renormalization-group method of the simple Migdal-Kadanoff type. The two models include many simpler models as their subspaces, and the interrelations among these models are elucidated. The five-dimensional (5D) phase diagram of the dCH model is generated from the 3D one of the CH model by introducing 2D site-dilution operation. The structure of the 5D phase diagram and the effect of site dilution on the CH model are conveniently visualized by introducing the concept of paths in the 3D subspace. The path describes the temperature variation provided that the ratios between the interaction parameters in the original CH model are fixed. The resulting phase diagrams of the dCH model exhibit the typical three-phase coexistence of solid, liquid, and gas, and their qualitative interpretations are summarized.

  11. Quantised vortices in polariton lattices

    NASA Astrophysics Data System (ADS)

    Berloff, Natalia

    2015-11-01

    The first comprehensive treatment of quantised vorticity in the light of research on vortices in modern fluid mechanics appeared in Russell Donnelly seminal research papers and summarized in his 1991 book ``Quantized Vortices in Helium II''. Recently quantized vortices have been studied in polariton condensates. Polaritons are the mixed light-matter quasi-particles that are formed in the strong exciton-photon coupling regime. Under non-resonant optical excitation rapid relaxation of carriers and bosonic stimulation result in the formation of a non-equilibrium polariton condensate characterized by a single many-body wave-function, therefore, naturally possessing quantized vortices. Polariton condensates can be imprinted into any two-dimensional lattice by spatial modulation of the pumping laser and form vortices via interacting outfows from the pumping sites. Optically pumped polariton condensates can be injected in lattice configurations with arbitrary density profiles offering the possibility to control the kinetics of the condensate and therefore the number and location of vortices. I will present some new developments in theoretical and experimental studies of quantized vortices in polariton condensates and discuss possible practical implementations of polariton lattices.

  12. Geographic information system-based healthcare waste management planning for treatment site location and optimal transportation routeing.

    PubMed

    Shanmugasundaram, Jothiganesh; Soulalay, Vongdeuane; Chettiyappan, Visvanathan

    2012-06-01

    In Lao People's Democratic Republic (Lao PDR), a growth of healthcare centres, and the environmental hazards and public health risks typically accompanying them, increased the need for healthcare waste (HCW) management planning. An effective planning of an HCW management system including components such as the treatment plant siting and an optimized routeing system for collection and transportation of waste is deemed important. National government offices at developing countries often lack the proper tools and methodologies because of the high costs usually associated with them. However, this study attempts to demonstrate the use of an inexpensive GIS modelling tool for healthcare waste management in the country. Two areas were designed for this study on HCW management, including: (a) locating centralized treatment plants and designing optimum travel routes for waste collection from nearby healthcare facilities; and (b) utilizing existing hospital incinerators and designing optimum routes for collecting waste from nearby healthcare facilities. Spatial analysis paved the way to understand the spatial distribution of healthcare wastes and to identify hotspots of higher waste generating locations. Optimal route models were designed for collecting and transporting HCW to treatment plants, which also highlights constraints in collecting and transporting waste for treatment and disposal. The proposed model can be used as a decision support tool for the efficient management of hospital wastes by government healthcare waste management authorities and hospitals.

  13. Mutations in an avian IgY-Fc fragment reveal the locations of monocyte Fc receptor binding sites

    PubMed Central

    Taylor, Alexander I.; Sutton, Brian J.; Calvert, Rosaleen A.

    2010-01-01

    The avian IgY antibody isotype shares a common ancestor with both mammalian IgG and IgE and so provides a means to study the evolution of their structural and functional specialisations. Although both IgG and IgE bind to their leukocyte Fc receptors with 1:1 stoichiometry, IgY binds to CHIR-AB1, a receptor expressed in avian monocytes, with 2:1 stoichiometry. The mutagenesis data reported here explain the structural basis for this difference, mapping the CHIR-AB1 binding site to the Cυ3/Cυ4 interface and not the N-terminal region of Cυ3 where, at equivalent locations, the IgG and IgE leukocyte Fc receptor binding sites lie. This finding, together with the phylogenetic relationship of the antibodies and their receptors, indicates that a substantial shift in the nature of Fc receptor binding occurred during the evolution of mammalian IgG and IgE. PMID:19733585

  14. [Sop proteins can cause transcriptional silencing of genes located close to the centromere sites of linear plasmid N15].

    PubMed

    Mardanov, A V; Lane, D; Ravin, N V

    2010-01-01

    Stable inheritance of bacterial chromosomes and low copy number plasmids is ensured by accurate partitioning of replicated molecules between the daughter cells at division. Partitioning of the prophage of the temperate bacteriophage N15, which exists as a linear plasmid molecule with covalently closed ends, depends on the sop locus, comprising genes sopA and sopB, as well as four centromere sites located in different regions of the N15 genome essential for replication and the control of lysogeny. We found that binding of SopB to the centromere can silence centromere-proximal promoters, presumably due to subsequent polymerizing of SopB along the DNA. Close to the IR4 centromere site we identified a promoter, P59, able to drive expression of phage late genes encoding the structural proteins of virion. We found that following binding to IR4 the N15 Sop proteins can cause repression of this promoter. The repression depends on SopB and became stronger in the presence of SopA. Sop-dependent silencing of centromere-proximal promoters control gene expression in phage N15, particularly preventing undesired expression of late genes in the N15 prophage. Thus, the phage N15 sop system not only ensures plasmid partitioning but is also involved in the genetic network controlling prophage replication and the maintenance of lysogeny.

  15. Epsilon-Proteobacterial Dominance in Microbial Mats Located at the Champagne Hydrothermal Vent Site on NW Eifuku Volcano, Mariana Arc

    NASA Astrophysics Data System (ADS)

    Davis, R. E.; Moyer, C. L.

    2004-12-01

    By far the most extensive hydrothermal vent related microbial mats discovered during the 2004 Ring of Fire cruise were those found at NW Eifuku Volcano located along the Mariana Island Arc. The Champagne Hydrothermal Vent Site located near the summit of NW Eifuku Volcano (1,650 meters below sea level) consists of multiple white smoker chimneys venting highly gaseous fluids (Max temp ˜103° C). Large amounts of liquid carbon dioxide bubbles and clathrates were observed exuding from the seafloor contributing to an extremely low Eh (i.e., highly reducing conditions) and giving the location its name. Luxuriant white flocculent mats were discovered and collected in and around the Champagne Vent Site in April, 2004. Molecular analyses of small subunit ribosomal DNA (SSU rDNA) from these mats using both T-RFLP community fingerprinting and PCR-generated clone library analyses showed that the bacterial community is dominated by ɛ -Proteobacteria represented by the thiovulum-group along with lesser levels of Thermotogales represented by the thermotoga-group (as determined using the Ribosomal Database Project). Initial estimates of the relative abundance of phylotypes place the thiovulum-group at 50% and 67%, and the thermotoga-group at 18% and 9%, for T-RFLP and clone library methods, respectively. Phylogenetic analysis of SSU rDNA sequence data also suggests that these most dominant phylotypes are most likely chemoautotrophic and involved in sulfur-cycling. Due to the extreme nature of their habitat, many of these bacteria often grow where no macrofauna are present. However, on the edges of these areas, once sufficient mixing has taken place, abundant macrofauna can be seen vigorously feeding upon these microbial mats. This further demonstrates the transfer of chemosynthetically-derived energy up the food chain supporting large communities of macrofauna. Similar types of microbial mats have been observed at Axial Volcano on the Juan de Fuca Ridge, where they were

  16. LONG-TERM STABILITY OF THE LOCAL GROUND CONTROL NETWORK AT THE CO-LOCATION SITE OF MEDICINA

    NASA Astrophysics Data System (ADS)

    Abbondanza, C.; Sarti, P.; Legrand, J.

    2009-12-01

    ITRF combinations rely on the availability of accurate tie vectors linking reference points of space geodetic techniques. Co-located instruments are assumed to move consistently and no local relative motion is taken into account. Instabilities may degrade the quality of the co-location itself and perturb the result of ITRF combinations. This work aims to determine the stability of the local ground control network at Medicina (Italy) with independent surveying methods. The observatory hosts a co-location between a VLBI telescope and two GPS antennas, MEDI and MSEL. It is located in the Po Plain where thick layers of clays are the prevalent soil characteristics. Hence, provision of long term stability of geodetic monuments is a challenge and monitoring their stability is an issue. MEDI and the VLBI station regularly contribute to the determination of ITRF, while MSEL is part of the EUREF network. A set of five tie vectors observations linking the VLBI and MEDI reference points was acquired between 2001 and 2007. It is our main tool for performing local deformation analysis. Additionally, the GPS time series of MEDI and MSEL were used to cross check and confirm the local instability detected by terrestrial methods. To achieve a rigorous and reliable investigation of the local stability, multi-epoch terrestrial observations were homogeneously processed according to common parameterizations in a consistent reference frame. Similarly, continuous GPS observations from MEDI and MSEL were analysed according to the new EPN reprocessing strategy in order to monitor the short baseline between MEDI and MSEL; to spotlight any change in its length. Both approaches confirm differential motions at the site which can be related to monument instabilities originated by the particularly unfavourable local geological setting and the inapt design of the monuments foundation. The monuments move non homogeneously at rates reaching up to 1.6 mm/year, this value being comparable to intra

  17. Lattice QCD

    SciTech Connect

    Bornyakov, V.G.

    2005-06-01

    Possibilities that are provided by a lattice regularization of QCD for studying nonperturbative properties of QCD are discussed. A review of some recent results obtained from computer calculations in lattice QCD is given. In particular, the results for the QCD vacuum structure, the hadron mass spectrum, and the strong coupling constant are considered.

  18. Massive depletion of bovine leukemia virus proviral clones located in genomic transcriptionally active sites during primary infection.

    PubMed

    Gillet, Nicolas A; Gutiérrez, Gerónimo; Rodriguez, Sabrina M; de Brogniez, Alix; Renotte, Nathalie; Alvarez, Irene; Trono, Karina; Willems, Luc

    2013-01-01

    Deltaretroviruses such as human T-lymphotropic virus type 1 (HTLV-1) and bovine leukemia virus (BLV) induce a persistent infection that remains generally asymptomatic but can also lead to leukemia or lymphoma. These viruses replicate by infecting new lymphocytes (i.e. the infectious cycle) or via clonal expansion of the infected cells (mitotic cycle). The relative importance of these two cycles in viral replication varies during infection. The majority of infected clones are created early before the onset of an efficient immune response. Later on, the main replication route is mitotic expansion of pre-existing infected clones. Due to the paucity of available samples and for ethical reasons, only scarce data is available on early infection by HTLV-1. Therefore, we addressed this question in a comparative BLV model. We used high-throughput sequencing to map and quantify the insertion sites of the provirus in order to monitor the clonality of the BLV-infected cells population (i.e. the number of distinct clones and abundance of each clone). We found that BLV propagation shifts from cell neoinfection to clonal proliferation in about 2 months from inoculation. Initially, BLV proviral integration significantly favors transcribed regions of the genome. Negative selection then eliminates 97% of the clones detected at seroconversion and disfavors BLV-infected cells carrying a provirus located close to a promoter or a gene. Nevertheless, among the surviving proviruses, clone abundance positively correlates with proximity of the provirus to a transcribed region. Two opposite forces thus operate during primary infection and dictate the fate of long term clonal composition: (1) initial integration inside genes or promoters and (2) host negative selection disfavoring proviruses located next to transcribed regions. The result of this initial response will contribute to the proviral load set point value as clonal abundance will benefit from carrying a provirus in transcribed

  19. Massive Depletion of Bovine Leukemia Virus Proviral Clones Located in Genomic Transcriptionally Active Sites during Primary Infection

    PubMed Central

    Gillet, Nicolas A.; Renotte, Nathalie; Alvarez, Irene; Trono, Karina; Willems, Luc

    2013-01-01

    Deltaretroviruses such as human T-lymphotropic virus type 1 (HTLV-1) and bovine leukemia virus (BLV) induce a persistent infection that remains generally asymptomatic but can also lead to leukemia or lymphoma. These viruses replicate by infecting new lymphocytes (i.e. the infectious cycle) or via clonal expansion of the infected cells (mitotic cycle). The relative importance of these two cycles in viral replication varies during infection. The majority of infected clones are created early before the onset of an efficient immune response. Later on, the main replication route is mitotic expansion of pre-existing infected clones. Due to the paucity of available samples and for ethical reasons, only scarce data is available on early infection by HTLV-1. Therefore, we addressed this question in a comparative BLV model. We used high-throughput sequencing to map and quantify the insertion sites of the provirus in order to monitor the clonality of the BLV-infected cells population (i.e. the number of distinct clones and abundance of each clone). We found that BLV propagation shifts from cell neoinfection to clonal proliferation in about 2 months from inoculation. Initially, BLV proviral integration significantly favors transcribed regions of the genome. Negative selection then eliminates 97% of the clones detected at seroconversion and disfavors BLV-infected cells carrying a provirus located close to a promoter or a gene. Nevertheless, among the surviving proviruses, clone abundance positively correlates with proximity of the provirus to a transcribed region. Two opposite forces thus operate during primary infection and dictate the fate of long term clonal composition: (1) initial integration inside genes or promoters and (2) host negative selection disfavoring proviruses located next to transcribed regions. The result of this initial response will contribute to the proviral load set point value as clonal abundance will benefit from carrying a provirus in transcribed

  20. MESSENGER observations of flux ropes and reconnection fronts: locations of the near tail reconnection site at Mercury

    NASA Astrophysics Data System (ADS)

    Sun, W. J.; Fu, S.; Slavin, J. A.; Raines, J. M.; Zong, Q.; Poh, G.; Zurbuchen, T.

    2016-12-01

    A statistical study of flux ropes and reconnection fronts (also called dipolarization fronts) base on MESSENGER magnetic field and plasma observations and its implication for the distribution of magnetic reconnection site in the Mercury's magnetotail has been performed in this research. We have surveyed the plasma sheet crossings at Mercury during three hot seasons of MESSENGER for flux ropes and reconnection fronts, which are believed to be highly related with magnetic reconnection. During the three hot season orbits. MESSENGER crossed the plasma sheet were mostly at a distance between - 2 RM and -3 RM, which is the region of previous determined location of Near Mercury Neutral Line. Thirty-nine flux ropes and 92 reconnection fronts were identified. The occurrence frequency distribution of flux ropes and reconnection fronts in the plasma sheet shows a clear dawn-dusk asymmetry with higher occurrence frequency on the dawn side than the dusk side. This suggests that magnetic reconnection in Mercury's magnetotail happens more frequently on the dawn side than dusk side plasma sheet. This is opposite to the observations in Earth's magnetotail showing magnetic reconnection more frequently occurs on the dusk side than the dawn side plasma sheet. The distribution of plasma sheet thickness shows that plasma sheet near the midnight is the thinnest part and does not show obvious asymmetry. Thus, the reasons that cause magnetic reconnection to preferentially occur on the dawnside of the magnetotail at Mercury may not be the plasma sheet thickness and require further study. The peak occurrence rates of flux ropes and reconnection fronts in Mercury's plasma sheet are 60 times higher than that of Earth's values, which we interpret to be due to the highly variable magnetospheric conditions at Mercury. Such higher occurrence rate of magnetic reconnection would generate more plasma flows in the dawnside plasma sheet than in the duskside. These plasma flows would mostly brake and

  1. Expected number of distinct sites visited by N Lévy flights on a one-dimensional lattice

    NASA Astrophysics Data System (ADS)

    Berkolaiko, G.; Havlin, S.; Larralde, H.; Weiss, G. H.

    1996-06-01

    We calculate asymptotic forms for the expected number of distinct sites, , visited by N noninteracting n-step symmetric Lévy flights in one dimension. By a Lévy flight we mean one in which the probability of making a step of j sites is proportional to 1/\\|j\\|1+α in the limit j-->∞. All values of α>~0 are considered. In our analysis each Lévy flight is initially at the origin and both N and n are assumed to be large. Different asymptotic results are obtained for different ranges in α. When n is fixed and N-->∞ we find that is proportional to (Nn2)1/(1+α) for α<1 and to N1/(1+α)n1/α for α>~1. When α exceeds 2 the second moment is finite and one expects the results of Larralde et al. [Phys. Rev. A 45, 7128 (1992)] to be valid. We give results for both fixed n and N-->∞ and N fixed and n-->∞. In the second case the analysis leads to the behavior predicted by Larralde et al.

  2. [Clinical effect on infantile food accumulation treated with centripetal tuina therapy at spleen meridian site of different location].

    PubMed

    Tan, Cheng; Li, Jiangshan; Li, Tielang; Jiang, Xueyu; Ye, Lan; Wang, Dejun

    2016-03-01

    To compare the difference in the clinical efficacy on infantile food accumulation treated with centripetal tuina therapy at spleen meridian site of different location. Sixty cases of infantile food accumulation were randomized into a palmar thumb surface group and a radial margin group, 30 cases in each one. In the palmar thumb surface group, the spleen meridian was stimulated with the pushing technique centripetally on the palmar side of the thumb. In the radial margin group, the spleen meridian was stimulated with the pushing, technique centripetally along the radial margin of the thumb. The traditional tuina techniques, such as tuisanguan, yun neibagua were combined in the two groups. The treatment was given once a day, 6 times a week, 12 treatments as one session. After the 1 session of treatment, the main symptom scores before and after treatment were compared in the patients of the two groups, the improvements in the accompanied symptoms were observed, such as appetite, defecation and tongue coating; and the efficacy was evaluated in the two groups. The total effective rates were 93.3% (28/30) and 90.0% (27/30) in the palmar thumb surface group and the radial margin group respectively and the difference was not significant statistically in comparison of the two groups (P > 0.05). After treatment, the main symptom score was improved significantly in the two groups, indicating the significant difference as compared with that before treatment (both P < 0.05). The improvement in foul breathing in the palmar thumb surface group was better than that in the radial margin group (P < 0.05). Between the two kinds of pushing techniques at spleen meridian site, pushing on the palmar surface of the thumb and pushing along the radial margin, there is no difference in the total efficacy on infantile food accumulation. Regarding the improvement in foul breathing, the effect in the palmar thumb surface group is better than that in the radial margin group.

  3. Anaerobic co-digestion plants for the revaluation of agricultural waste: Sustainable location sites from a GIS analysis.

    PubMed

    Villamar, Cristina Alejandra; Rivera, Diego; Aguayo, Mauricio

    2016-04-01

    The aim of this study was to establish sustainably feasible areas for the implementation of anaerobic co-digestion plants for agricultural wastes (cattle/swine slurries and cereal crop wastes). The methodology was based on the use of geographic information systems (GIS), the analytic hierarchy process (AHP) and map algebra generated from hedges related to environmental, social and economic constraints. The GIS model obtained was applied to a region of Chile (Bío Bío Region) as a case study showing the energy potential (205 MW-h) of agricultural wastes (swine/cattle manures and cereal crop wastes) and thereby assessing its energy contribution (3.5%) at country level (Chile). From this model, it was possible to spatially identify the influence of each factor (environmental, economic and social) when defining suitable areas for the siting of anaerobic co-digestion plants. In conclusion, GIS-based models establish appropriate areas for the location of anaerobic co-digestion plants in the revaluation of agricultural waste from the production of energy through biogas production.

  4. Cystatin D Locates in the Nucleus at Sites of Active Transcription and Modulates Gene and Protein Expression*

    PubMed Central

    Ferrer-Mayorga, Gemma; Alvarez-Díaz, Silvia; Valle, Noelia; De Las Rivas, Javier; Mendes, Marta; Barderas, Rodrigo; Canals, Francesc; Tapia, Olga; Casal, J. Ignacio; Lafarga, Miguel; Muñoz, Alberto

    2015-01-01

    Cystatin D is an inhibitor of lysosomal and secreted cysteine proteases. Strikingly, cystatin D has been found to inhibit proliferation, migration, and invasion of colon carcinoma cells indicating tumor suppressor activity that is unrelated to protease inhibition. Here, we demonstrate that a proportion of cystatin D locates within the cell nucleus at specific transcriptionally active chromatin sites. Consistently, transcriptomic analysis show that cystatin D alters gene expression, including that of genes encoding transcription factors such as RUNX1, RUNX2, and MEF2C in HCT116 cells. In concordance with transcriptomic data, quantitative proteomic analysis identified 292 proteins differentially expressed in cystatin D-expressing cells involved in cell adhesion, cytoskeleton, and RNA synthesis and processing. Furthermore, using cytokine arrays we found that cystatin D reduces the secretion of several protumor cytokines such as fibroblast growth factor-4, CX3CL1/fractalkine, neurotrophin 4 oncostatin-M, pulmonary and activation-regulated chemokine/CCL18, and transforming growth factor B3. These results support an unanticipated role of cystatin D in the cell nucleus, controlling the transcription of specific genes involved in crucial cellular functions, which may mediate its protective action in colon cancer. PMID:26364852

  5. Modeling long-range time-resolved charge-transfer within TDDFT: Insights from a 2-site lattice model

    NASA Astrophysics Data System (ADS)

    Fuks, Johanna; Maitra, Neepa

    2014-03-01

    It has been shown that approximate adiabatic TDDFT functionals dramatically fail to reproduce time-resolved long-range charge-transfer dynamics (LR-CTD). In order to decouple the impact of the adiabatic approximation and the choice of ground state (gs) functional it would be instructive to propagate using the adiabatically-exact (adia-ex) functional. Numerically this involves an iterative process at each time-step to find the gs potential for a given density, which converges badly for CTD due to regions of low density. To circumvent this, we use as model system an asymmetric 2-site Hubbard model with small hopping parameter, its small Hilbert space allows to perform a Levy-Lieb constrained search and find the exact gs Hartree-exchange-correlation (Hxc) functional. The later develops a sharp step feature in the long-range limit (limit of small hopping parameter). Both closed-shell to closed-shell and open-shell to open-shell LR-CT are investigated. By propagating the Kohn-Sham system in the presence of the exact gs Hxc functional under a resonant laser we are able to perform, for the first time, a fully self-consistent adia-ex propagation for CTD. We aknowledge financial support from the Department of Energy, Office of Basic Energy Sciences, Division of Chemical Sciences, Geosciences ans Biosciences under Award DE-SC0008623 and NSF Grants CNS-0855217 and CNS-0958379.

  6. LIDAR-based coastal landscape reconstruction and harbour location: The Viking-age royal burial site of Borre (Norway)

    NASA Astrophysics Data System (ADS)

    Draganits, Erich; Doneus, Michael; Gansum, Terje

    2013-04-01

    Airborne light detection and ranging (LIDAR) has found wide application in archaeological research for the detection and documentation of archaeological and palaeo-environmental features. In this study we demonstrate the analysis of an LIDAR derived 1x1 m digital elevation model (DTM) combined with geoarchaeological research of the coastal Viking-age burial site in Borre, Olso Fjord (Norway). Borre is an exceptional burial site in Scandinavia, containing burial mounds up to 40 m in diameter and 6 m height, mentioned in Nordic Sagas, especially in the skaldic poem Ynglingatal, as the burial place of one or two kings of the Ynglinga dynasty. Archaeological findings and radiocarbon ages indicate that the Borre burial ground had been in use broadly between 600-1000 AD. Despite the reasonable expectation that a coastal site connected with the Viking kings of Vestfold, with hall buildings and ship graves demands a harbour, up to now no harbour has not been found with traditional archaeological surveys. Since the area of Borre is affected by a continuous land uplift related to glacial rebound of Scandinavia, any former harbour site is expected to be exposed to the land surface today. The present day vertical crustal uplift is calculated around 2.5 mm/yr in the area of Borre. Burial mounds and surrounding borrow pits as well as geomorphological features of the uplifted coast of Borre have been analysed by the 1x1 m LIDAR-DTM, using hillshade, slope and local relief model for visualisation. Altogether, 41 burial mounds and further 6 potential mounds are visible in the high-resolution DTM. A succession of more than 14 beach ridges, cross-cut by the burial mounds, is visible from the present shore line up to 18 m asl. They are more or less parallel and similar in size, except between at ca. 4-6 m asl, where the most prominent ridge is located, which probably has been enforced artificially. Using published shoreline displacement curves from nearby areas, the shore-line at

  7. Equipartition gamma-ray blazars and the location of the gamma-ray emission site in 3C 279

    SciTech Connect

    Dermer, Charles D.; Cerruti, Matteo; Lott, Benoit

    2014-02-20

    Blazar spectral models generally have numerous unconstrained parameters, leading to ambiguous values for physical properties like Doppler factor δ{sub D} or fluid magnetic field B'. To help remedy this problem, a few modifications of the standard leptonic blazar jet scenario are considered. First, a log-parabola function for the electron distribution is used. Second, analytic expressions relating energy loss and kinematics to blazar luminosity and variability, written in terms of equipartition parameters, imply δ{sub D}, B', and the peak electron Lorentz factor γ{sub pk}{sup ′}. The external radiation field in a blazar is approximated by Lyα radiation from the broad-line region (BLR) and ≈0.1 eV infrared radiation from a dusty torus. When used to model 3C 279 spectral energy distributions from 2008 and 2009 reported by Hayashida et al., we derive δ{sub D} ∼ 20-30, B' ∼ few G, and total (IR + BLR) external radiation field energy densities u ∼ 10{sup –2}-10{sup –3} erg cm{sup –3}, implying an origin of the γ-ray emission site in 3C 279 at the outer edges of the BLR. This is consistent with the γ-ray emission site being located at a distance R ≲ Γ{sup 2} ct {sub var} ∼ 0.1(Γ/30){sup 2}(t {sub var}/10{sup 4} s) pc from the black hole powering 3C 279's jets, where t {sub var} is the variability timescale of the radiation in the source frame, and at farther distances for narrow-jet and magnetic-reconnection models. Excess ≳ 5 GeV γ-ray emission observed with Fermi LAT from 3C 279 challenges the model, opening the possibility of a second leptonic component or a hadronic origin of the emission. For low hadronic content, absolute jet powers of ≈10% of the Eddington luminosity are calculated.

  8. Frustration in an exactly solvable mixed-spin Ising model with bilinear and three-site four-spin interactions on a decorated square lattice

    NASA Astrophysics Data System (ADS)

    Jaščur, M.; Štubňa, V.; Szałowski, K.; Balcerzak, T.

    2016-11-01

    Competitive effects of so-called three-site four-spin interactions, single ion anisotropy and bilinear interactions is studied in the mixed spin-1/2 and spin-1 Ising model on a decorated square lattice. Exploring the decoration-iteration transformation, we have obtained exact closed-form expressions for the partition function and other thermodynamic quantities of the model. From these relations, we have numerically determined ground-state and finite-temperature phase diagrams of the system. We have also investigated temperature variations of the correlation functions, internal energy, entropy, specific heat and Helmholtz free energy of the system. From the physical point of view, the most interesting result represents our observation of a partially ordered ferromagnetic or phase in the system with zero bilinear interactions. It is remarkable, that due to strong frustrations disordered spins survive in the system even at zero temperature, so that the ground state of the system becomes macroscopically degenerate with non-zero entropy. Introduction of arbitrarily small bilinear interaction completely removes degeneracy and the entropy always goes to zero at the ground state.

  9. Wigner crystallization of a two-dimensional electron gas in a magnetic field: Single electrons versus electron pairs at the lattice sites

    NASA Astrophysics Data System (ADS)

    Taut, M.

    2001-10-01

    The ground state energy and the lowest excitations of a two-dimensional Wigner crystal in a perpendicular magnetic field with one and two electrons per cell is investigated. In the case of two electrons per lattice site, the interaction of the electrons within each cell is taken into account exactly (including exchange and correlation effects), and the interaction between the cells is in second order (dipole) van der Waals approximation. No further approximations are made, in particular Landau level mixing and incomplete spin polarization are accounted for. Therefore, our calculation comprises a, roughly speaking, complementary description of the bubble phase (in the special case of one and two electrons per bubble), which was proposed by Koulakov, Fogler, and Shklovskii on the basis of a Hartree Fock calculation. The phase diagram shows that in GaAs the paired phase is energetically more favorable than the single electron phase for, roughly speaking, filling factor f larger than 0.3 and density parameter rs smaller than 19 effective Bohr radii (for a more precise statement see Figs. 3 and 4). If we start within the paired phase and increase magnetic field or decrease density, the pairs first undergo some singlet-triplet transitions before they break.

  10. Brominated flame retardants and polychlorinated biphenyls in human breast milk from several locations in India: potential contaminant sources in a municipal dumping site.

    PubMed

    Devanathan, Gnanasekaran; Subramanian, Annamalai; Sudaryanto, Agus; Takahashi, Shin; Isobe, Tomohiko; Tanabe, Shinsuke

    2012-02-01

    This study investigated the status of contamination of organohalogen compounds (OCs) such as polychlorinated biphenyls (PCBs) and brominated flame retardant (BFRs), including polybrominated diphenyl ethers (PBDEs) and hexabromocyclododecanes (HBCDs) in human milk samples from several locations in India. The levels of OCs were significantly higher in the milk of mothers living in and near municipal dumping site than other locations indicating that the open dumping sites for municipal wastes act as potential sources of these contaminants in India. The PCB concentrations observed in this study tended to decrease compared to those in the matched locations reported previously, probably due to the restriction of technical PCB usage in India. PBDE levels in human milk were two to three folds lower than those of PCBs in all the sampling locations investigated. Congener profiles of PCBs and PBDEs were different between samples from the dumping site mothers and general populations in other areas suggesting the presence of region-specific sources and pathways. HBCDs were detected in human milk from only two sites, with much lower concentrations and detection frequencies compared to PCBs and PBDEs. When hazard quotients (HQs) of PCBs and PBDEs were estimated for infant health risk, the HQs in some milk samples from the dumping site exceeded the threshold value (HQ>1) of PCBs, indicating the potential risk for infants in the specific site. Copyright © 2011 Elsevier Ltd. All rights reserved.

  11. Interpretation and Modelling of Data from Site Investigations for a Geological Disposal facility located in the UK

    NASA Astrophysics Data System (ADS)

    Clark, H.; Bailey, L.; Parkes, A.

    2012-04-01

    The Radioactive Waste Management Directorate (RWMD) of the Nuclear Decommissioning Authority (NDA) has been given the responsibility for implementing geological disposal in the United Kingdom. The implementation process envisaged is that once a candidate site or sites for a geological disposal facility have been identified, NDA-RWMD will undertake surface-based investigations at the site or sites. The information acquired through these investigations would be used as an input to the development of the safety case, for engineering design of the disposal facility and to demonstrate confidence to the key stakeholders that the potential disposal facility site is adequately understood. NDA-RWMD proposes to develop and present the information derived from site characterisation activities in the form of a single integrated Site Descriptive Model, i.e. a description of the geometry, properties of the bedrock and water, and the associated interacting processes and mechanisms, which will be used to address the information requirements of all the end users (including the safety case). It is anticipated that, in a similar way to the approach adopted by international radioactive waste programmes led by SKB (Sweden) and Posiva (Finland), the integrated Site Descriptive Model will be divided into parts comprising clearly defined disciplines which may form either chapters or discipline-based models such as: • Geology; • Hydrogeology; • Hydrochemistry; • Geotechnical; • Radionuclide Transport Properties; • Thermal Properties; and • Biosphere. The integrated Site Descriptive Model will evolve as understanding of the particular site advances and will describe the current understanding of a specific site and, where relevant, the historical development of conditions at the site where this supports the conceptual understanding. The Site Descriptive Model will not include prediction of the future evolution of the conditions at the site: this will be an important component

  12. Gulf Watch Alaska nearshore component: Monitoring site locations from Prince William Sound, Katmai National Park and Preserve, and Kenai Fjords National Park

    USGS Publications Warehouse

    Coletti, Heather A.; Kloecker, Kim; Bodkin, James L.; Dean, Thomas A.

    2017-01-01

    These data are part of the Gulf Watch Alaska (GWA) long term monitoring program, nearshore monitoring component. Specifically, these data describe site locations for rocky intertidal, mussel sampling, soft sediment bivalve sampling, and eelgrass bed sampling in the northern Gulf of Alaska within the GWA program. The dataset consists of two comma separated files exported from a Microsoft Excel workbook. The data consists of 1. rocky intertidal, mussel sampling, and soft sediment site location information, and 2. eelgrass bed locations. Sampling will be conducted in Katmai National Park and Preserve (KATM), Kenai Fjords National Park (KEFJ), Prince William Sound (PWS) and to a lesser extent on the Lake Clark National Park and Preserve (LACL). Sites from a related project that provides similar data from Kachemak Bay (KBAY) are included here.

  13. Targeted survey of Newcastle disease virus in backyard poultry flocks located in wintering site for migratory birds from Southern Brazil.

    PubMed

    Marks, Fernanda S; Rodenbusch, Carla R; Okino, Cíntia H; Hein, Héber E; Costa, Eduardo F; Machado, Gustavo; Canal, Cláudio W; Brentano, Liana; Corbellini, Luís G

    2014-09-01

    Newcastle disease virus (NDV) causes a fast-spreading, highly contagious infectious disease in several bird species. Commercial poultry farms in Brazil were considered free of virulent NDV. Data on NDV infection levels in backyard poultry flocks and the epidemiology of the disease are limited. The aim of this study was to perform a NDV survey in backyard poultry from households flocks located around one of the main wintering sites for migratory wild birds in Brazil, and to identify potential risk factors associated with NDV. Backyard poultry may be sentinels and a source of infection for commercial poultry, since they may have as much contact with these birds as with migratory wild birds. Data were collected from 48 randomly selected households using an epidemiological questionnaire. Serum samples from poultry were tested for NDV antibodies using an ELISA, and tracheal and cloacal swabs were collected for NDV molecular detection. The risk factors were assessed using a multivariate Poisson regression with robust variance. The ELISA showed that 33.8% of the serum samples were positive for anti-NDV antibodies and in 42 households (87.5%) at least one NDV-positive bird was found. Tracheal and cloacal swabs were negative for NDV by real time RT-PCR, possible because within this region there might flow a low pathogenicity NDV strain, which can induce seroconversion with innaparent clinical findings. The prevalence ratio (PR) increased when farmers used their own replacement poultry to restock their flock (PR=1.64; 95% CI: 1.11-2.42). Furthermore, the increasing distance of the household flock from the "Laguna do Peixe" estuary was associated with decreasing NDV seropositivity (PR=0.94; 95% CI: 0.90-0.99). This is the first study in Brazil evaluating the presence of NDV and the associated risk factors in households with backyard poultry flocks. The great number of farms with seropositive birds indicates that the virus circulates in backyard flocks, and this breeding

  14. Subwavelength lattice optics by evolutionary design.

    PubMed

    Huntington, Mark D; Lauhon, Lincoln J; Odom, Teri W

    2014-12-10

    This paper describes a new class of structured optical materials--lattice opto-materials--that can manipulate the flow of visible light into a wide range of three-dimensional profiles using evolutionary design principles. Lattice opto-materials are based on the discretization of a surface into a two-dimensional (2D) subwavelength lattice whose individual lattice sites can be controlled to achieve a programmed optical response. To access a desired optical property, we designed a lattice evolutionary algorithm that includes and optimizes contributions from every element in the lattice. Lattice opto-materials can exhibit simple properties, such as on- and off-axis focusing, and can also concentrate light into multiple, discrete spots. We expanded the unit cell shapes of the lattice to achieve distinct, polarization-dependent optical responses from the same 2D patterned substrate. Finally, these lattice opto-materials can also be combined into architectures that resemble a new type of compound flat lens.

  15. 75 FR 28657 - Dell Products LP-Parmer North Location, a Subsidiary of Dell, Inc., Including On-Site Leased...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-21

    ...., Including On-Site Leased Workers From Belcan Services Group, Hawkins Associates, Inc., Integrated Human Capital, MagRabbit, Manpower and Spherion Corporation; Round Rock, TX; Dell Products LP--Parmer North One...., including on-site leased workers from Belcan Services Group, Hawkins Associates Inc., Integrated...

  16. Are Business-Oriented Social Networking Web Sites Useful Resources for Locating Passive Jobseekers? Results of a Recent Study

    ERIC Educational Resources Information Center

    DeKay, Sam

    2009-01-01

    The assumption that members of business-oriented social networking Web sites are passive jobseekers has never been validated. The purpose of this study is to examine the accuracy of this assumption. The study concludes that this claim is questionable and that the majority of members registered at one major site, and possibly others, are currently…

  17. A GIS based screening tool for locating and ranking of suitable stormwater harvesting sites in urban areas.

    PubMed

    Inamdar, P M; Cook, S; Sharma, A K; Corby, N; O'Connor, J; Perera, B J C

    2013-10-15

    There is the need to re-configure current urban water systems to achieve the objective of sustainable water sensitive cities. Stormwater represents a valuable alternative urban water source to reduce pressure on fresh water resources, and to mitigate the environmental impact of urban stormwater runoff. The selection of suitable urban stormwater harvesting sites is generally based on the judgement of water planners, who are faced with the challenge of considering multiple technical and socio-economic factors that influence the site suitability. To address this challenge, the present study developed a robust GIS based screening methodology for identifying potentially suitable stormwater harvesting sites in urban areas as a first pass for then more detailed investigation. The study initially evaluated suitability based on the match between harvestable runoff and demand through a concept of accumulated catchments. Drainage outlets of these accumulated catchments were considered as potential stormwater harvesting sites. These sites were screened and ranked under screening parameters namely demand, ratio of runoff to demand and weighted demand distance. The methodology described in this paper was successfully applied to a case study in Melbourne, Australia in collaboration with the local water utility. The methodology was found to be effective in supporting the selection of priority sites for stormwater harvesting schemes, as it provided the basis to identify, short-list and rank sites for further detailed investigation. The rapid identification of suitable sites for stormwater harvesting can assist planners in prioritising schemes in areas that will have the most impact on reducing potable water demand.

  18. Are Business-Oriented Social Networking Web Sites Useful Resources for Locating Passive Jobseekers? Results of a Recent Study

    ERIC Educational Resources Information Center

    DeKay, Sam

    2009-01-01

    The assumption that members of business-oriented social networking Web sites are passive jobseekers has never been validated. The purpose of this study is to examine the accuracy of this assumption. The study concludes that this claim is questionable and that the majority of members registered at one major site, and possibly others, are currently…

  19. 43 CFR 3830.25 - When do I pay for recording a new notice or certificate of location for a mining claim or site?

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... maintenance fee, in full, as provided in § 3830.21 of this chapter, at the time you record new notices or... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false When do I pay for recording a new notice... MINERALS MANAGEMENT (3000) LOCATING, RECORDING, AND MAINTAINING MINING CLAIMS OR SITES; GENERAL...

  20. Final environmental impact statement for the Nevada Test Site and off-site locations in the state of Nevada: Mitigation action plan

    SciTech Connect

    1997-02-01

    The DOE Notice of Availability for this environmental impact statement was published in the Federal Register on Friday, October 18, 1996 (61 FR 54437). The final environmental impact statement identifies potential adverse effects resulting from the four use alternatives evaluated and discusses measures that DOE considered for the mitigation of these potential adverse effects. The Secretary of Energy signed the Record of Decision on the management and operation of the Nevada Test Site and other DOE sites in the state of Nevada on December 9, 1996. These decisions will result in the continuation of the multipurpose, multi-program use of the Nevada Test Site, under which DOE will pursue a further diversification of interagency, private industry, and public-education uses while meeting its Defense Program, Waste Management, and Environmental Restoration mission requirements at the Nevada Test Site and other Nevada sites, including the Tonopah Test Range, the Project Shoal Site, the Central Nevada Test Area, and on the Nellis Air Force Range Complex. The Record of Decision also identifies specific mitigation actions beyond the routine day-to-day physical and administrative controls needed for implementation of the decisions. These specific mitigation actions are focused on the transportation of waste and on groundwater availability. This Mitigation Action Plan elaborates on these mitigation commitments.

  1. NIMBY, CLAMP, and the location of new nuclear-related facilities: U.S. national and 11 site-specific surveys.

    PubMed

    Greenberg, Michael R

    2009-09-01

    Public and political opposition have made finding locations for new nuclear power plants, waste management, and nuclear research and development facilities a challenge for the U.S. government and the nuclear industry. U.S. government-owned properties that already have nuclear-related activities and commercial nuclear power generating stations are logical locations. Several studies and utility applications to the Nuclear Regulatory Commission suggest that concentrating locations at major plants (CLAMP) has become an implicit siting policy. We surveyed 2,101 people who lived within 50 miles of 11 existing major nuclear sites and 600 who lived elsewhere in the United States. Thirty-four percent favored CLAMP for new nuclear power plants, 52% for waste management facilities, and 50% for new nuclear laboratories. College educated, relatively affluent male whites were the strongest CLAMP supporters. They disproportionately trusted those responsible for the facilities and were not worried about existing nuclear facilities or other local environmental issues. Notably, they were concerned about continuing coal use. Not surprisingly, CLAMP proponents tended to be familiar with their existing local nuclear site. In short, likely CLAMP sites have a large and politically powerful core group to support a CLAMP policy. The challenge to proponents of nuclear technologies will be to sustain this support and expand the base among those who clearly are less connected and receptive to new nearby sites.

  2. Three-year summary report of biological monitoring at the Southwest Ocean dredged-material disposal site and additional locations off Grays Harbor, Washington, 1990--1992

    SciTech Connect

    Antrim, L.D.; Shreffler, D.K.; Pearson, W.H.; Cullinan, V.I. )

    1992-12-01

    The Grays Harbor Navigation Improvement Project was initiated to improve navigation by widening and deepening the federal channel at Grays Harbor. Dredged-material disposal sites were selected after an extensive review process that included inter-agency agreements, biological surveys, other laboratory and field studies, and preparation of environmental impact statements The Southwest Site, was designated to receive materials dredged during annual maintenance dredging as well as the initial construction phase of the project. The Southwest Site was located, and the disposal operations designed, primarily to avoid impacts to Dungeness crab. The Final Environmental Impact Statement Supplement for the project incorporated a Site Monitoring Plan in which a tiered approach to disposal site monitoring was recommended. Under Tier I of the Site Monitoring Plan, Dungeness crab densities are monitored to confirm that large aggregations of newly settled Dungeness crab have not moved onto the Southwest Site. Tier 2 entails an increased sampling effort to determine whether a change in disposal operations is needed. Four epibenthic surveys using beam trawls were conducted in 1990, 1991, and 1992 at the Southwest Site and North Reference area, where high crab concentrations were found in the spring of 1985. Survey results during these three years prompted no Tier 2 activities. Epibenthic surveys were also conducted at two nearshore sites where construction of sediment berms has been proposed. This work is summarized in an appendix to this report.

  3. Using radial basis function on the general form of Chou's pseudo amino acid composition and PSSM to predict subcellular locations of proteins with both single and multiple sites.

    PubMed

    Huang, Chao; Yuan, Jingqi

    2013-07-01

    Prediction of protein subcellular location is a meaningful task which attracted much attention in recent years. A lot of protein subcellular location predictors which can only deal with the single-location proteins were developed. However, some proteins may belong to two or even more subcellular locations. It is important to develop predictors which will be able to deal with multiplex proteins, because these proteins have extremely useful implication in both basic biological research and drug discovery. Considering the circumstance that the number of methods dealing with multiplex proteins is limited, it is meaningful to explore some new methods which can predict subcellular location of proteins with both single and multiple sites. Different methods of feature extraction and different models of predict algorithms using on different benchmark datasets may receive some general results. In this paper, two different feature extraction methods and two different models of neural networks were performed on three benchmark datasets of different kinds of proteins, i.e. datasets constructed specially for Gram-positive bacterial proteins, plant proteins and virus proteins. These benchmark datasets have different number of location sites. The application result shows that RBF neural network has apparently superiorities against BP neural network on these datasets no matter which type of feature extraction is chosen.

  4. Lattice overview

    SciTech Connect

    Creutz, M.

    1984-01-01

    After reviewing some recent developments in supercomputer access, the author discusses a few areas where perturbation theory and lattice gauge simulations make contact. The author concludes with a brief discussion of a deterministic dynamics for the Ising model. This may be useful for numerical studies of nonequilibrium phenomena. 13 references.

  5. Nucleosomes Selectively Inhibit Cas9 Off-target Activity at a Site Located at the Nucleosome Edge.

    PubMed

    Hinz, John M; Laughery, Marian F; Wyrick, John J

    2016-11-25

    Nucleosomes affect Cas9 binding and activity at on-target sites, but their impact at off-target sites is unknown. To investigate how nucleosomes affect Cas9 cleavage at off-target sites in vitro, we used a single guide RNA (sgRNA) that has been previously shown to efficiently direct Cas9 cleavage at the edge of the strongly positioned 601 nucleosome. Our data indicate that single mismatches between the sgRNA and DNA target have relatively little effect on Cas9 cleavage of naked DNA substrates, but strongly inhibit cleavage of nucleosome substrates, particularly when the mismatch is in the sgRNA "seed" region. These findings indicate that nucleosomes may enhance Cas9 specificity by inhibiting cleavage of off-target sites at the nucleosome edge.

  6. Ventricular catheter entry site and not catheter tip location predicts shunt survival: a secondary analysis of 3 large pediatric hydrocephalus studies.

    PubMed

    Whitehead, William E; Riva-Cambrin, Jay; Kulkarni, Abhaya V; Wellons, John C; Rozzelle, Curtis J; Tamber, Mandeep S; Limbrick, David D; Browd, Samuel R; Naftel, Robert P; Shannon, Chevis N; Simon, Tamara D; Holubkov, Richard; Illner, Anna; Cochrane, D Douglas; Drake, James M; Luerssen, Thomas G; Oakes, W Jerry; Kestle, John R W

    2017-02-01

    OBJECTIVE Accurate placement of ventricular catheters may result in prolonged shunt survival, but the best target for the hole-bearing segment of the catheter has not been rigorously defined. The goal of the study was to define a target within the ventricle with the lowest risk of shunt failure. METHODS Five catheter placement variables (ventricular catheter tip location, ventricular catheter tip environment, relationship to choroid plexus, catheter tip holes within ventricle, and crosses midline) were defined, assessed for interobserver agreement, and evaluated for their effect on shunt survival in univariate and multivariate analyses. De-identified subjects from the Shunt Design Trial, the Endoscopic Shunt Insertion Trial, and a Hydrocephalus Clinical Research Network study on ultrasound-guided catheter placement were combined (n = 858 subjects, all first-time shunt insertions, all patients < 18 years old). The first postoperative brain imaging study was used to determine ventricular catheter placement for each of the catheter placement variables. RESULTS Ventricular catheter tip location, environment, catheter tip holes within the ventricle, and crosses midline all achieved sufficient interobserver agreement (κ > 0.60). In the univariate survival analysis, however, only ventricular catheter tip location was useful in distinguishing a target within the ventricle with a survival advantage (frontal horn; log-rank, p = 0.0015). None of the other catheter placement variables yielded a significant survival advantage unless they were compared with catheter tips completely not in the ventricle. Cox regression analysis was performed, examining ventricular catheter tip location with age, etiology, surgeon, decade of surgery, and catheter entry site (anterior vs posterior). Only age (p < 0.001) and entry site (p = 0.005) were associated with shunt survival; ventricular catheter tip location was not (p = 0.37). Anterior entry site lowered the risk of shunt failure compared

  7. Location of high-affinity metal binding sites in the profile structure of the Ca+2-ATPase in the sarcoplasmic reticulum by resonance x-ray diffraction.

    PubMed Central

    Asturias, F J; Blasie, J K

    1991-01-01

    Resonance x-ray diffraction measurements on the lamellar diffraction from oriented multilayers of isolated sarcoplasmic reticulum (SR) membranes containing a small concentration of lanthanide (III) ions (lanthanide/protein molar ratio approximately 4) have allowed us to calculate both the electron density profile of the SR membrane and the separate electron density profile of the resonant lanthanide atoms bound to the membrane to a relatively low spatial resolution of approximately 40 A. Analysis of the membrane electron density profile and modeling of the separate low resolution lanthanide atom profile, using step-function electron density models based on the assumption that metal binding sites in the membrane profile are discrete and localized, resulted in the identification of a minimum of three such binding sites in the membrane profile. Two of these sites are low-affinity, low-occupancy sites identified with the two phospholipid polar headgroup regions of the lipid bilayer within the membrane profile. Up to 20% of the total lanthanide (III) ions bind to these low-affinity sites. The third site has relatively high affinity for lanthanide ion binding; its Ka is roughly an order of magnitude larger than that for the lower affinity polar headgroup sites. Approximately 80% of the total lanthanide ions present in the sample are bound to this high-affinity site, which is located in the "stalk" portion of the "headpiece" within the profile structure of the Ca+2 ATPase protein, approximately 12 A outside of the phospholipid polar headgroups on the extravesicular side of the membrane profile. Based on the nature of our results and on previous reports in the literature concerning the ability of lanthanide (III) ions to function as Ca+2 analogues for the Ca+2 ATPase we suggest that we have located a high-affinity metal binding site in the membrane profile which is involved in the active transport of Ca+2 ions across the SR membrane by the Ca+2 ATPase. PMID:1826221

  8. Random Tagging Genotyping by Sequencing (rtGBS), an Unbiased Approach to Locate Restriction Enzyme Sites across the Target Genome

    PubMed Central

    Hilario, Elena; Barron, Lorna; Deng, Cecilia H.; Datson, Paul M.; Davy, Marcus W.; Storey, Roy D.

    2015-01-01

    Genotyping by sequencing (GBS) is a restriction enzyme based targeted approach developed to reduce the genome complexity and discover genetic markers when a priori sequence information is unavailable. Sufficient coverage at each locus is essential to distinguish heterozygous from homozygous sites accurately. The number of GBS samples able to be pooled in one sequencing lane is limited by the number of restriction sites present in the genome and the read depth required at each site per sample for accurate calling of single-nucleotide polymorphisms. Loci bias was observed using a slight modification of the Elshire et al. method: some restriction enzyme sites were represented in higher proportions while others were poorly represented or absent. This bias could be due to the quality of genomic DNA, the endonuclease and ligase reaction efficiency, the distance between restriction sites, the preferential amplification of small library restriction fragments, or bias towards cluster formation of small amplicons during the sequencing process. To overcome these issues, we have developed a GBS method based on randomly tagging genomic DNA (rtGBS). By randomly landing on the genome, we can, with less bias, find restriction sites that are far apart, and undetected by the standard GBS (stdGBS) method. The study comprises two types of biological replicates: six different kiwifruit plants and two independent DNA extractions per plant; and three types of technical replicates: four samples of each DNA extraction, stdGBS vs. rtGBS methods, and two independent library amplifications, each sequenced in separate lanes. A statistically significant unbiased distribution of restriction fragment size by rtGBS showed that this method targeted 49% (39,145) of BamH I sites shared with the reference genome, compared to only 14% (11,513) by stdGBS. PMID:26633193

  9. Shaping solitons by lattice defects

    SciTech Connect

    Dong Liangwei; Ye Fangwei

    2010-11-15

    We demonstrate the existence of shape-preserving self-localized nonlinear modes in a two-dimensional photonic lattice with a flat-topped defect that covers several lattice sites. The balance of diffraction, defocusing nonlinearity, and optical potential induced by lattices with various forms of defects results in novel families of solitons featuring salient properties. We show that the soliton shape can be controlled by varying the shape of lattice defects. The existence domains of fundamental and vortex solitons in the semi-infinite gap expand with the defect amplitude. Vortex solitons in the semi-infinite gap with rectangular intensity distributions will break into dipole solitons when the propagation constant exceeds a critical value. In the semi-infinite and first-finite gaps, we find that lattices with rectangular defects can support stable vortex solitons which exhibit noncanonical phase structure.

  10. Statistics of lattice animals

    NASA Astrophysics Data System (ADS)

    Hsu, Hsiao-Ping; Nadler, Walder; Grassberger, Peter

    2005-07-01

    The scaling behavior of randomly branched polymers in a good solvent is studied in two to nine dimensions, modeled by lattice animals on simple hypercubic lattices. For the simulations, we use a biased sequential sampling algorithm with re-sampling, similar to the pruned-enriched Rosenbluth method (PERM) used extensively for linear polymers. We obtain high statistics of animals with up to several thousand sites in all dimension 2⩽d⩽9. The partition sum (number of different animals) and gyration radii are estimated. In all dimensions we verify the Parisi-Sourlas prediction, and we verify all exactly known critical exponents in dimensions 2, 3, 4, and ⩾8. In addition, we present the hitherto most precise estimates for growth constants in d⩾3. For clusters with one site attached to an attractive surface, we verify the superuniversality of the cross-over exponent at the adsorption transition predicted by Janssen and Lyssy.

  11. Genetically encoded photocrosslinkers locate the high-affinity binding site of antidepressant drugs in the human serotonin transporter

    PubMed Central

    Rannversson, Hafsteinn; Andersen, Jacob; Sørensen, Lena; Bang-Andersen, Benny; Park, Minyoung; Huber, Thomas; Sakmar, Thomas P.; Strømgaard, Kristian

    2016-01-01

    Despite the well-established role of the human serotonin transporter (hSERT) in the treatment of depression, the molecular details of antidepressant drug binding are still not fully understood. Here we utilize amber codon suppression in a membrane-bound transporter protein to encode photocrosslinking unnatural amino acids (UAAs) into 75 different positions in hSERT. UAAs are incorporated with high specificity, and functionally active transporters have similar transport properties and pharmacological profiles compared with wild-type transporters. We employ ultraviolet-induced crosslinking with p-azido-L-phenylalanine (azF) at selected positions in hSERT to map the binding site of imipramine, a prototypical tricyclic antidepressant, and vortioxetine, a novel multimodal antidepressant. We find that the two antidepressants crosslink with azF incorporated at different positions within the central substrate-binding site of hSERT, while no crosslinking is observed at the vestibular-binding site. Taken together, our data provide direct evidence for defining the high-affinity antidepressant binding site in hSERT. PMID:27089947

  12. Diluted manganese on the bond-centered site in germanium

    SciTech Connect

    Decoster, S.; Vantomme, A.; Cottenier, S.; Wahl, U.; Correia, J. G.; Pereira, L. M. C.; Lacasta, C.; Da Silva, M. R.

    2010-10-11

    The functional properties of Mn-doped Ge depend to large extent on the lattice location of the Mn impurities. Here, we present a lattice location study of implanted diluted Mn by means of electron emission channeling. Surprisingly, in addition to the expected substitutional lattice position, a large fraction of the Mn impurities occupies the bond-centered site. Corroborated by ab initio calculations, the bond-centered Mn is related to Mn-vacancy complexes. These unexpected results call for a reassessment of the theoretical studies on the electrical and magnetic behavior of Mn-doped Ge, hereby including the possible role of Mn-vacancy complexes.

  13. An examination of water quality indicators in swim sites located in the upper Los Angeles River Watershed

    NASA Astrophysics Data System (ADS)

    Lee, C. M.; Morris, K.; Fingland, N. K.; Johnstone, K.; Pendleton, L.; Ponce, A.; Tang, C.; Griffith, J. F.; Steele, N. L.

    2013-12-01

    Multiple sites in the upper Los Angeles River watershed were sampled during summer 2012 and measured for Escherichia coli, enterococci, and Clostridium perfringens (vegetative cells and spores) using culture-based analyses and preserved for quantitative polymerase chain reaction (qPCR) analysis. The objective of this work includes the characterization of how well indicators correlated with each other, with respect to background levels and to 'spikes' from background, possibly indicative of a pollution input, environmental/physicochemical parameters, as well as in the context of recreational water quality standards. The 2nd objective of this work was to evaluate the economic impact of implementing qPCR at our study sites for rapid water quality monitoring. None of the species of indicators correlated well with each other (R2 < 0.1) across sites and dates when the sample set was examined in its entirety, though C. perfringens vegetative cells and spores were moderately correlated (R2 = 0.31, p = 0.07). The observation of concentration 'spikes' against background levels, suggesting a potential input of contamination, were observed on holiday sampling days and will be examined further. In general, the number of swimmers present was not linked with indicator concentrations; however, incidence of water quality exceedances (for E. coli 235 CFU or MPN/100 mL sample) were more likely to occur on the weekend or holidays (for E. coli, , suggesting that the presence/absence of swimmers may be an important variable at our sites. Clostridium perfringens may be a useful indicator at our study sites, as a comparison of vegetative to endospore forms of this organism may be used to understand how recently a contamination event or input occurred.

  14. Lattice fermions

    NASA Technical Reports Server (NTRS)

    Wilczek, Frank

    1987-01-01

    A simple heuristic proof of the Nielsen-Ninomaya theorem is given. A method is proposed whereby the multiplication of fermion species on a lattice is reduced to the minimal doubling, in any dimension, with retention of appropriate chiral symmetries. Also, it is suggested that use of spatially thinned fermion fields is likely to be a useful and appropriate approximation in QCD - in any case, it is a self-checking one.

  15. A Single-Site Platinum CO Oxidation Catalyst in Zeolite KLTL: Microscopic and Spectroscopic Determination of the Locations of the Platinum Atoms

    SciTech Connect

    Kistler, Joseph D.; Chotigkrai, Nutchapon; Xu, Pinghong; Enderle, Bryan; Praserthdam, Piyasan; Chen, Cong-Yan; Browning, Nigel D.; Gates, Bruce C.

    2014-07-01

    A stable site-isolated mononuclear platinum catalyst with a well-defined structure is presented. Platinum complexes supported in zeolite KLTL were synthesized from [Pt(NH3)4](NO3)2, oxidized at 633 K, and used to catalyze CO oxidation. Finally, IR and X-ray absorption spectra and electron micrographs determine the structures and locations of the platinum complexes in the zeolite pores, demonstrate the platinum-support bonding, and show that the platinum remained site isolated after oxidation and catalysis.

  16. Soil data for a thermokarst bog and the surrounding permafrost plateau forest, located at Bonanza Creek Long Term Ecological Research Site, Interior Alaska

    USGS Publications Warehouse

    Manies, Kristen L.; Fuller, Christopher C.; Jones, Miriam C.; Waldrop, Mark P.; McGeehin, John P.

    2017-01-19

    Peatlands play an important role in boreal ecosystems, storing a large amount of soil organic carbon. In northern ecosystems, collapse-scar bogs (also known as thermokarst bogs) often form as the result of ground subsidence following permafrost thaw. To examine how ecosystem carbon balance changes with the loss of permafrost, we measured carbon and nitrogen storage within a thermokarst bog and the surrounding forest, which continues to have permafrost. These sites are a part of the Bonanza Creek Long Term Ecological Research (LTER) site and are located within Interior Alaska. Here, we report on methods used for core collection analysis as well as the cores’ physical, chemical, and descriptive properties.

  17. Nocturnal Plant Bugs Use cis-Jasmone to Locate Inflorescences of an Araceae as Feeding and Mating Site.

    PubMed

    Etl, Florian; Berger, Andreas; Weber, Anton; Schönenberger, Jürg; Dötterl, Stefan

    2016-04-01

    Inflorescences of Araceae pollinated by cyclocephaline scarab beetles are visited frequently by a wide array of other arthropods that exploit floral resources without taking part in pollination, including earwigs, flies, and true bugs. To date, nothing is known about the cues these insect visitors use to locate the inflorescences and whether or to what extent floral scents play a role. An aroid visited by large numbers of plant bugs (Miridae) in addition to cyclocephaline scarab beetle pollinators is the Neotropical species Dieffenbachia aurantiaca. We identified the plant bug species and investigated their behavior and arrival time on the inflorescences. To test the importance of olfactory cues in locating their host we conducted experiments with open and gauze-bagged inflorescences as well as natural scent samples of D. aurantiaca. Inflorescence scents were analyzed by gas chromatography linked to mass spectrometry (GC/MS), and the attractive potential of the main scent compound was determined by behavioral assays. Three species of Neella, the most common one being N. floridula, visited the inflorescences at nightfall, shortly after the beginning of scent emission, and showed feeding and copulation activity. Bagged inflorescences as well as natural scent samples attracted similar numbers of plant bugs as the non-bagged inflorescences, showing that olfactory cues are sufficient for them to locate their host. Cis-jasmone was the major component within the inflorescence scent bouquet. In two-choice field bioassays, this compound proved to be highly attractive to Neella, and thus obviously plays a key role in finding host plants.

  18. Binding of transcription factor GabR to DNA requires recognition of DNA shape at a location distinct from its cognate binding site.

    PubMed

    Al-Zyoud, Walid A; Hynson, Robert M G; Ganuelas, Lorraine A; Coster, Adelle C F; Duff, Anthony P; Baker, Matthew A B; Stewart, Alastair G; Giannoulatou, Eleni; Ho, Joshua W K; Gaus, Katharina; Liu, Dali; Lee, Lawrence K; Böcking, Till

    2016-02-18

    Mechanisms for transcription factor recognition of specific DNA base sequences are well characterized and recent studies demonstrate that the shape of these cognate binding sites is also important. Here, we uncover a new mechanism where the transcription factor GabR simultaneously recognizes two cognate binding sites and the shape of a 29 bp DNA sequence that bridges these sites. Small-angle X-ray scattering and multi-angle laser light scattering are consistent with a model where the DNA undergoes a conformational change to bend around GabR during binding. In silico predictions suggest that the bridging DNA sequence is likely to be bendable in one direction and kinetic analysis of mutant DNA sequences with biolayer interferometry, allowed the independent quantification of the relative contribution of DNA base and shape recognition in the GabR-DNA interaction. These indicate that the two cognate binding sites as well as the bendability of the DNA sequence in between these sites are required to form a stable complex. The mechanism of GabR-DNA interaction provides an example where the correct shape of DNA, at a clearly distinct location from the cognate binding site, is required for transcription factor binding and has implications for bioinformatics searches for novel binding sites. © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

  19. Relationships between climate, soil moisture and phenology of the woody cover in two sites located along the West African latitudinal gradient

    NASA Astrophysics Data System (ADS)

    Seghieri, Josiane; Vescovo, Aude; Padel, Karine; Soubie, Remy; Arjounin, Marc; Boulain, Nicolas; de Rosnay, Patricia; Galle, Sylvie; Gosset, Marielle; Mouctar, Abakar H.; Peugeot, Christophe; Timouk, Franck

    2009-08-01

    SummaryThe study quantifies the relationships at local scale between phenology and determinants of climate and soil water resources at two sites located along the latitudinal gradient of West Africa, one in the central Sahel (Mali), the other in the Sudanian bioclimatic zone (Benin). The aim is to improve our knowledge on possible vegetation response to possible climate change. Within the Sudanian site, average annual rainfall is 1200 mm, extending from April to October, while, in the Sahelian site, it is 370 mm, occurring from June to September. Physical data were collected from the African Monsoon Multidisciplinary Analysis research programme. The phenology of the dominant species was monitored in four types of vegetation cover at the wetter site, and in three types of vegetation cover at the drier site. For each sampled plant, leafing, flowering and fruiting were recorded as binary variables in terms of the presence/absence of phenophases. A small proportion of the variability of each phenophase occurrence is explained by the logit models. However, rainfall rise is significantly linked to leafing probability increase in the Sahelian site but not in the Sudanian site. Day length extension and temperature decrease are significantly correlated with an increase in leafing in the Sudanian site, but not in the Sahelian. On both sites, the increase in cumulative rainfall is not found to be linked to an increased probability of reproductive phenophases (negative or non-significant relationships). Air temperature is positively correlated with flowering rate in the Sudanian site, but, all other factors being constant, no climate factors are found to be highly significant of flowering occurrence in the Sahel. Fruiting probability is positively correlated mainly with temperature within the Sahelian site. Leafing occurrence is positively correlated with soil moisture in the 0-1 m layer for the Sudanian site, but not for the Sahelian site. Significant relationships between

  20. The location of the high- and low-affinity bilirubin-binding sites on serum albumin: ligand-competition analysis investigated by circular dichroism.

    PubMed

    Goncharova, Iryna; Orlov, Sergey; Urbanová, Marie

    2013-01-01

    The locations of three bilirubin (BR)-binding sites with different affinities were identified as subdomains IB, IIA and IIIA for five mammalian serum albumins (SAs): human (HSA), bovine (BSA), rat, (RSA), rabbit (RbSA) and sheep (SSA). The stereoselectivity of a high-affinity BR-binding site was identified in the BR/SA=1/1 system by circular dichroism (CD) spectroscopy, the sites with low affinity to BR were analyzed using difference CD. Site-specific ligand-competition experiments with ibuprofen (marker for subdomain IIIA) and hemin (marker for subdomain IB) did not reveal any changes for the BR/SA=1/1 system and showed a decrease of the bound BR at BR/SA=3/1. Both sites were identified as sites with low affinity to BR. The correlation between stereoselectivity and the arrangement of Arg-Lys residues indicated similarity between the BR-binding sites in subdomain IIIA for all of the SAs studied. Subdomain IB in HSA, BSA, SSA and RbSA has P-stereoselectivity while in RSA it has M-selectivity toward BR. A ligand-competition experiment with gossypol shows a decrease of the CD signal of bound BR for the BR/SA=1/1 system as well as for BR/SA=3/1. Subdomain IIA was assigned as a high-affinity BR-binding site. The P-stereoselectivity of this site in HSA (and RSA, RbSA) was caused by the right-hand localization of charged residues R257/R218-R222, whereas the left-hand orientation of R257/R218-R199 led to the M-stereoselectivity of the primary binding site in BSA (and SSA).

  1. Floridas Miami Tequesta Indian Site, Its Calusa Indian Locations, the Matacumbe Keys, and Orlandos Wikiwa Springs Generate Environmentally Significant EMFs.

    NASA Astrophysics Data System (ADS)

    Mac Dougall, Jean S.; Mc Leod, Roger D.; Mc Leod, David M.

    2003-10-01

    Florida purchased the Tequesta ([Langue] doc Christ Spirit-signal) Indian site along the Miami River site that vigorously pulsates with even minor rainstorms entering or leaving the area. Although there is a laughable chimera of a fountain of youth associated with Ponce de Leons discovery of the Florida peninsula in about AD 1513, the Calusa (Royal Christ Jesus Spirit-signal) Indian Nation has an associated significance with EMF signals they possibly monitored throughout their area of activity. Our efforts have also led to the investigation of cultural and other influences implied by the Matacumbe Keys that indicate a shared commonality of awareness with Native Americans of the northeast such as Metacomet, or regions like Maines Grand Lake Matagamon and its associated electromagnetic Spirit Signal. Wikiwa Springs near Orlando shares much with Massachusetts (adherent of serpent Jesus Christ Spirit-signal) Natick, and New Hampshires Naticook Island. These are the locales of environmentally sensitive instrumentation.

  2. The mode of action of pleuromutilin derivatives. Location and properties of the pleuromutilin binding site on Escherichia coli ribosomes.

    PubMed

    Högenauer, G

    1975-03-03

    Using equilibrium dialysis techniques it could be demonstrated that (a) the pleuromutilin derivative 14-deoxy-14[(2-diethylaminoethyl)-mercaptoacetoxy] dihydromutilin HCl binds to one site per ribosome specifically, (b) the binding constant is 1.3 times 10(7) M(-1) and (c) chloramphenicol and puromycin compete with binding of the pleuromutilin derivative. Similarly the nucleotides CpA and CpCpA also displace the unsaturated derivative of the above-mentioned pleuromutilin compound. These findings suggest that the ribosomal binding site for pleuromutilin overlaps with that for chloramphenicol and analogs of the 3'-terminus of a tRNA, like puromycin or the nucleotides CpA and CpCpA.

  3. Location of Release Sites and Calcium-Activated Chloride Channels Relative to Calcium Channels at the Photoreceptor Ribbon Synapse

    PubMed Central

    Mercer, A. J.; Rabl, K.; Riccardi, G. E.; Brecha, N. C.; Stella, S. L.

    2011-01-01

    Vesicle release from photoreceptor ribbon synapses is regulated by L-type Ca2+ channels, which are in turn regulated by Cl− moving through calcium-activated chloride [Cl(Ca)] channels. We assessed the proximity of Ca2+ channels to release sites and Cl(Ca) channels in synaptic terminals of salamander photoreceptors by comparing fast (BAPTA) and slow (EGTA) intracellular Ca2+ buffers. BAPTA did not fully block synaptic release, indicating some release sites are <100 nm from Ca2+ channels. Comparing Cl(Ca) currents with predicted Ca2+ diffusion profiles suggested that Cl(Ca) and Ca2+ channels average a few hundred nanometers apart, but the inability of BAPTA to block Cl(Ca) currents completely suggested some channels are much closer together. Diffuse immunolabeling of terminals with an antibody to the putative Cl(Ca) channel TMEM16A supports the idea that Cl(Ca) channels are dispersed throughout the presynaptic terminal, in contrast with clustering of Ca2+ channels near ribbons. Cl(Ca) currents evoked by intracellular calcium ion concentration ([Ca2+]i) elevation through flash photolysis of DM-nitrophen exhibited EC50 values of 556 and 377 nM with Hill slopes of 1.8 and 2.4 in rods and cones, respectively. These relationships were used to estimate average submembrane [Ca2+]i in photoreceptor terminals. Consistent with control of exocytosis by [Ca2+] nanodomains near Ca2+ channels, average submembrane [Ca2+]i remained below the vesicle release threshold (∼400 nM) over much of the physiological voltage range for cones. Positioning Ca2+ channels near release sites may improve fidelity in converting voltage changes to synaptic release. A diffuse distribution of Cl(Ca) channels may allow Ca2+ influx at one site to influence relatively distant Ca2+ channels. PMID:21084687

  4. Evaluation of Potential Locations for Siting Small Modular Reactors near Federal Energy Clusters to Support Federal Clean Energy Goals

    SciTech Connect

    Belles, Randy J.; Omitaomu, Olufemi A.

    2014-09-01

    Geographic information systems (GIS) technology was applied to analyze federal energy demand across the contiguous US. Several federal energy clusters were previously identified, including Hampton Roads, Virginia, which was subsequently studied in detail. This study provides an analysis of three additional diverse federal energy clusters. The analysis shows that there are potential sites in various federal energy clusters that could be evaluated further for placement of an integral pressurized-water reactor (iPWR) to support meeting federal clean energy goals.

  5. Modular Robotics for Delivering On-Site contamination Sensors and Mapping Systems to Difficult-to-Access Locations

    SciTech Connect

    Geisinger, Joseph

    2001-05-21

    Presently, characterization operations are scheduled for thousands of facilities and pieces of equipment throughout DOE sites, each of which requires manual surveying with handheld instruments and manual record keeping. Such work, particularly in difficult-to-access-areas, results in significant amounts of worker exposure, long timelines and additional secondary waste generation. Therefore, a distinct need exists for remote tools that can quickly deploy sensors and automated contamination mapping systems into these areas.

  6. Thermal tolerance in the Andean toad Rhinella spinulosa (Anura: Bufonidae) at three sites located along a latitudinal gradient in Chile.

    PubMed

    Riquelme, Nicza Alveal; Díaz-Páez, Helen; Ortiz, Juan Carlos

    2016-08-01

    Rhinella spinulosa is one of the anuran species with the greatest presence in Chile. This species mainly inhabits mountain habitats and is distributed latitudinally along the western slope of the Andes Range. These habitats undergo great temperature fluctuations, exerting pressure on the amphibian. To identify the physiological strategies and thermal behavior of this species, we analyzed the temperature variables CTmin, CTmax, TTR, τheat, and τcool in individuals of three sites from a latitudinal gradient (22°S to 37°S). The amphibians were acclimated to 10°C and 20°C and fed ad libitum. The results indicate that the species has a high thermal tolerance range, with a mean of 38.14±1.34°C, a critical thermal maxima of 34.6-41.4°C, and a critical thermal minima of 2.6-0.8°C, classifying the species as eurythermic. Furthermore, there were significant differences in CTmáx and TTR only in the northern site. The differences in thermal time constants between sites are due to the effects of size and body mass. For example, those from the central site had larger size and greater thermal inertia; therefore, they warmed and cooled in a slower manner. The wide thermal limits determined in R. spinulosa confirm that it is a thermo-generalist species, a characteristic that allows the species to survive in adverse microclimatic conditions. The level of plasticity in critical temperatures seems ecologically relevant and supports the acclimatization of thermal limits as an important factor for ectothermic animals to adapt to climate change. Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. Evaluation of airborne thermal infrared imagery for locating mine drainage sites in the Lower Youghiogheny River Basin, Pennsylvania, USA

    USGS Publications Warehouse

    Sams, James I.; Veloski, Garret; Ackman, T.E.

    2003-01-01

    Nighttime high-resolution airborne thermal infrared imagery (TIR) data were collected in the predawn hours during Feb 5-8 and March 11-12, 1999, from a helicopter platform for 72.4 km of the Youghiogheny River, from Connellsville to McKeesport, in southwestern Pennsylvania. The TIR data were used to identify sources of mine drainage from abandoned mines that discharge directly into the Youghiogheny River. Image-processing and geographic information systems (GIS) techniques were used to identify 70 sites within the study area as possible mine drainage sources. The combination of GIS datasets and the airborne TIR data provided a fast and accurate method to target the possible sources. After field reconnaissance, it was determined that 24 of the 70 sites were mine drainage. This paper summarizes: the procedures used to process the TIR data and extract potential mine-drainage sites; methods used for verification of the TIR data; a discussion of factors affecting the TIR data; and a brief summary of water quality.

  8. Local environments for Cs(1) and Cs(2) sites in a perovskite Cs2CoBr4 single crystal with a dominant magnetic type based on the observed spin-lattice relaxation time

    NASA Astrophysics Data System (ADS)

    Lim, Ae Ran; Lim, Kye-Young

    2017-08-01

    The local structure and molecular motion for 133Cs in a Cs2CoBr4 single crystal were examined by using the spin-lattice relaxation time from nuclear magnetic resonance (NMR). The two inequivalent Cs(1) and Cs(2) sites surrounded by Br ions in Cs2CoBr4 were clearly distinguished by using 133Cs NMR spectra. The spin-lattice relaxation times T1 of the Cs(1) and Cs(2) nuclei in Cs2CoBr4 were obtained, and the temperature dependence of the relaxation time for Cs(2) changed more abruptly than that for Cs(1). The T1 values for Cs(1) and Cs(2) ions were used to determine the activation energies for the molecular motions, and the molecular motion of Cs(2) surrounded by nine bromide ions was tighter than that of Cs(1) surrounded by 11 bromide ions.

  9. Chemical shift and spin-lattice relaxation time for two crystallographically inequivalent 133Cs sites in Cs2BBr4 (B=57Co, 63Cu, and 65Zn) using magic-angle spinning nuclear magnetic resonance

    NASA Astrophysics Data System (ADS)

    Lim, Ae Ran; Kim, Sun Ha

    2017-05-01

    The structural geometry around the 133Cs nuclei in Cs2BBr4 (B = 57Co, 63Cu, and 65Zn) was investigated by examining the chemical shifts and spin-lattice relaxation times in a rotating frame. Two crystallographically inequivalent Cs(1) and Cs(2) sites were differentiated. The spin-lattice relaxation times T1ρ of 133Cs nuclei in three crystals were measured to obtain detailed information about their structural dynamics. Cs(1) surrounded by eleven bromide ions was found to have a longer relaxation time than Cs(2) surrounded by nine bromide ions. The nuclear magnetic resonance (NMR) results were compared to previously reported results for Cs2BCl4. The halogen species in Cs2BX4 (X = Br, Cl) was not found to influence the relaxation time, whereas the B metal ion (B = Co, Cu, and Zn) was found to alter the relaxation time mechanism.

  10. MtiBase: a database for decoding microRNA target sites located within CDS and 5'UTR regions from CLIP-Seq and expression profile datasets.

    PubMed

    Guo, Zhi-Wei; Xie, Chen; Yang, Jian-Rong; Li, Jun-Hao; Yang, Jian-Hua; Zheng, Limin

    2015-01-01

    MicroRNAs (miRNAs) play an important role in the regulation of gene expression. Previous studies on miRNA functions mainly focused on their target sites in the 3' untranslated regions (UTRs) of mRNAs. However, increasing evidence has revealed that miRNAs can also induce mRNA degradation and mediate translational repression via complementary interactions with the coding sequence (CDS) and 5'UTR of mRNAs. In this study, we developed a novel database, MtiBase, to facilitate the comprehensive exploration of CDS- and 5'UTR-located miRNA target sites identified from cross-linking immunoprecipitation sequencing (CLIP-Seq) datasets and to uncover their regulatory effects on mRNA stability and translation from expression profile datasets. By integrating 61 Argonaute protein-binding CLIP-Seq datasets and miRNA target sites predicted by five commonly used programs, we identified approximately 4 400 000 CDS-located and 470 000 5'UTR-located miRNA target sites. Moreover, we evaluated the regulatory effects of miRNAs on mRNA stability and translation using the data from 222 gene expression profiles, and 28 ribosome-protected fragment sequencing, and six pulsed stable isotope labeling with amino acids in culture. Finally, the effects of SNPs on the functions of miRNA target sites were systematically evaluated. Our study provides a useful tool for functional studies of miRNAs in regulating physiology and pathology. Database URL: http://mtibase.sysu.edu.cn. © The Author(s) 2015. Published by Oxford University Press.

  11. Identification and characterization of a cluster of transcription start sites located in the E6 ORF of human papillomavirus type 16.

    PubMed

    Rosenstierne, Maiken W; Vinther, Jeppe; Hansen, Christina N; Prydsoe, Martin; Norrild, Bodil

    2003-11-01

    Human papillomavirus type 16 (HPV-16) is the prototype strain among the malignant types of HPV in the western world. The main promoter, P97, located in front of the E6 ORF, has been shown to control expression of the oncogenes E6 and E7. These oncogenes are expressed continuously in HPV-16-transformed cells. In contrast to malignant HPV types, non-malignant HPV types have separate promoters driving the expression of E6 and E7. Experiments have shown that the translation of E7 is more efficient from monocistronic than bicistronic transcripts encoding both E6 and E7. Here, identification of a cluster of transcription start sites located in the E6 ORF of HPV-16 is presented. Transcripts from this region contain the E7 ORF as the first reading frame. The cluster consists of multiple transcription start sites located around nt 441. Additional transcription start sites were identified in a cluster around nt 480. A transcription start site has been identified previously at nt 480 but has never been characterized further. The region responsible for transcription activity was mapped to nt 272-448. Mutational analysis showed that initiation of transcription is independent of a TATA-box element, which is consistent with the finding of multiple transcription start sites. Furthermore, it is shown that proteins from HeLa and SiHa nuclear cell extracts bind to the two regions at nt 291-314 and 388-411, and that these two regions influence transcription activity in a cell type-dependent manner.

  12. Using chloride and chlorine-36 as soil-water tracers to estimate deep percolation at selected locations on the U.S. Department of Energy Hanford Site, Washington

    SciTech Connect

    Prych, E.A.

    1998-12-31

    This report presents the results of a study of the use of a chloride mass-balance method and a chlorine-36 isotope bomb-pulse method for estimating local long-term average rates of deep percolation of water from precipitation at selected locations at the Hanford Site. Deep percolation was estimated using the mass-balance method at a total of 13 locations in 6 areas. The bomb-pulse method was used for estimates at one location in each of four of the areas. The report describes the theory and assumptions upon which the two methods are based. The different areas at Hanford where soil samples were collected to obtain data for making estimates are described along with the methods used to collect and analyze the samples.

  13. Effect of impurities on the vortex lattice in Bose-Einstein condensates on optical lattice

    NASA Astrophysics Data System (ADS)

    Mithun, T.; Porsezian, K.; Dey, Bishwajyoti

    2015-06-01

    We numerically solve the Gross-Pitaeveskii equation to study the Bose-Einstein condensate in the rotating harmonical tarp and co-rotating optical lattice. The effect of a pinning site or impurity shows that it is able to move the vortex lattice center to either left or right depending on the position of the impurity. Also, it is observed that the impurity at the random positions can destroy the vortex lattice and the resulting disordered lattice has more energy.

  14. Thermodynamic and structural properties of finely discretized on-lattice hard-sphere fluids: Virial coefficients, free energies, and direct correlation functions.

    PubMed

    Siderius, Daniel W; Gelb, Lev D

    2009-08-28

    Using both molecular simulation and theory, we examine fluid-phase thermodynamic and structural properties of on-lattice hard-sphere fluids. Our purpose in this work is to provide reference data for on-lattice density functional theories [D. W. Siderius and L. D. Gelb, Langmuir 25, 1296 (2009)] and related perturbation theories. In this model, hard spheres are located at sites on a finely discretized cubic lattice where the spacing between lattice sites is between one-tenth and one-third the hard-sphere diameter. We calculate exactly the second, third, and fourth virial coefficients as functions of the lattice spacing. Via Monte Carlo simulation, we measure the excess chemical potential as a function of density for several lattice spacings. These results are then parametrized with a convenient functional form and can immediately be used in on-lattice density functional theories. Of particular interest is to identify those lattice spacings that yield properties similar to those of the off-lattice fluid. We find that the properties of the on-lattice fluid are strongly dependent on lattice spacing, generally approaching those of the off-lattice fluid with increasing lattice resolution, but not smoothly. These observations are consistent with results for larger lattice spacings [A. Z. Panagiotopoulos, J. Chem. Phys. 123, 104504 (2005)]. Certain lattice spacings are found to yield fluid properties in particularly good agreement with the off-lattice fluid. We also find that the agreement of many different on- and off-lattice hard-sphere fluid properties is predicted quite well by that of the virial coefficients, suggesting that they may be used to identify favorable lattice spacings. The direct correlation function at a few lattice spacings and a single density is obtained from simulation. The on-lattice fluid is structurally anisotropic, exhibiting spherical asymmetry in correlation functions. Interestingly, the anisotropies are properly captured in the Percus

  15. Evaluation of airborne thermal infrared imagery for locating mine drainage sites in the Lower Kettle Creek and Cooks Run Basins, Pennsylvania, USA

    USGS Publications Warehouse

    Sams, James I.; Veloski, Garret

    2003-01-01

    High-resolution airborne thermal infrared (TIR) imagery data were collected over 90.6 km2 (35 mi2) of remote and rugged terrain in the Kettle Creek and Cooks Run Basins, tributaries of the West Branch of the Susquehanna River in north-central Pennsylvania. The purpose of this investigation was to evaluate the effectiveness of TIR for identifying sources of acid mine drainage (AMD) associated with abandoned coal mines. Coal mining from the late 1800s resulted in many AMD sources from abandoned mines in the area. However, very little detailed mine information was available, particularly on the source locations of AMD sites. Potential AMD sources were extracted from airborne TIR data employing custom image processing algorithms and GIS data analysis. Based on field reconnaissance of 103 TIR anomalies, 53 sites (51%) were classified as AMD. The AMD sources had low pH (<4) and elevated concentrations of iron and aluminum. Of the 53 sites, approximately 26 sites could be correlated with sites previously documented as AMD. The other 27 mine discharges identified in the TIR data were previously undocumented. This paper presents a summary of the procedures used to process the TIR data and extract potential mine drainage sites, methods used for field reconnaissance and verification of TIR data, and a brief summary of water-quality data.

  16. [Culicidae of medical-veterinary importance in natural breeding sites located in three areas of Camagüey province in Cuba].

    PubMed

    Diéguez Fernández, Lorenzo; Vásquez Capote, Raisa; Mentor Sarría, Vivian Engracia; Díaz Martínez, Ireté; Fimia Duarte, Rigoberto

    2012-01-01

    Malaria is a serious public health problem at present; it affects almost half of the population from over 100 countries and poses a high risk of reintroduction in Cuba. To identify the Culicidae species present in natural breeding sites located in three areas of Camagüey municipality, particularly anopheles. Larval inspections were carried out in 66 natural breeding sites of Anopheles almimanus located in three areas of Camagüey municipality from May to June 2010, according the World Health Organization methodology. The preferential breeding sites of Anopheles albimanus and the association of this species with other Culicidae were ascertained. Presence of Culicidae in 28.78% of inspected breeding sites, being Anopheles albimanus the prevailing one with 63.51%. This species was captured together with Culex quinquefasciatus, Culex nigripalpus, Culex erraticus, Culex corniger, Psorophora confinnis, Psorophora howardii and Ochlerottatus scapularis, in low polluted water bodies such as lagoons (58.34%) and streams (25%), and in others more polluted such as ditches (8.33%) and narrow trails (8.33%). The existence of species of medical and veterinary importance, particularly Anopheles albimanus, in the studied areas calls for constant monitoring of these species in order to draw up integrated strategies focused on the biological fight, and the involvement of the community in this process to help in preventing the emergence of cases or epidemic outbreaks of imported malaria.

  17. Isolation and characterisation of mineral-oxidising "Acidibacillus" spp. from mine sites and geothermal environments in different global locations.

    PubMed

    Holanda, Roseanne; Hedrich, Sabrina; Ňancucheo, Ivan; Oliveira, Guilherme; Grail, Barry M; Johnson, D Barrie

    2016-09-01

    Eight strains of acidophilic bacteria, isolated from mine-impacted and geothermal sites from different parts of the world, were shown to form a distinct clade (proposed genus "Acidibacillus") within the phylum Firmicutes, well separated from the acidophilic genera Sulfobacillus and Alicyclobacillus. Two of the strains (both isolated from sites in Yellowstone National Park, USA) were moderate thermophiles that oxidised both ferrous iron and elemental sulphur, while the other six were mesophiles that also oxidised ferrous iron, but not sulphur. All eight isolates reduced ferric iron to varying degrees. The two groups shared <95% similarity of their 16S rRNA genes and were therefore considered to be distinct species: "Acidibacillus sulfuroxidans" (moderately thermophilic isolates) and "Acidibacillus ferrooxidans" (mesophilic isolates). Both species were obligate heterotrophs; none of the eight strains grew in the absence of organic carbon. "Acidibacillus" spp. were generally highly tolerant of elevated concentrations of cationic transition metals, though "A. sulfuroxidans" strains were more sensitive to some (e.g. nickel and zinc) than those of "A. ferrooxidans". Initial annotation of the genomes of two strains of "A. ferrooxidans" revealed the presence of genes (cbbL) involved in the RuBisCO pathway for CO2 assimilation and iron oxidation (rus), though with relatively low sequence identities.

  18. Location of the epidermal growth factor binding site on the EGF receptor. A resonance energy transfer study.

    PubMed

    Carraway, K L; Koland, J G; Cerione, R A

    1990-09-18

    As a first step toward developing a structural map of key sites on the epidermal growth factor (EGF) receptor, we have used resonance energy transfer to measure the distance of closest approach between the receptor-bound growth factor molecule and lipid molecules at the surface of the plasma membrane. EGF, specifically labeled at its amino terminus with fluorescein 5-isothiocyanate, was used as an energy donor in these experiments, while either octadecylrhodamine B or octadecylrhodamine 101, inserted into plasma membranes isolated from human epidermoid carcinoma (A431) cells, served as the energy acceptors. The energy transfer measurements indicate that the amino terminus of the bound growth factor is about 67 A away from the plasma membrane. On the basis of the dimensions of the EGF molecule, this suggests that EGF binds to a site on its receptor that is a considerable distance (52-82 A) from the surface of these cells. Identical results were obtained under conditions where the receptor functions as an active tyrosine kinase, suggesting that the relative juxtaposition of the EGF binding domain to the membrane surface does not change with receptor autophosphorylation or with the activation of the receptor tyrosine kinase activity.

  19. Mesothelioma incidence in the neighbourhood of an asbestos-cement plant located in a national priority contaminated site.

    PubMed

    Fazzo, Lucia; Menegozzo, Simona; Soggiu, Maria Eleonora; De Santis, Marco; Santoro, Michele; Cozza, Valentina; Brangi, Amelia; Menegozzo, Massimo; Comba, Pietro

    2014-01-01

    An epidemic of asbestos-related disease is ongoing in most industrialized countries, mainly attributable to past occupational exposure but partly due to environmental exposure. In this perspective, the incidence of pleural mesothelioma close to a former asbestos-cement plant in a national contaminated site was estimated. The census-tracts interested by atmospheric dispersion of facilities in the contaminated site were identified. Two subareas with different estimated environmental asbestos impact were distinguished. An ecological study at micro-geographic level was performed. The standardized incidence ratios (SIR) for study area and the two subareas, in comparison with region and municipality were computed. The standardized incidence rate ratio (IRR) between the two subareas was computed. Mesothelioma incidence in the study area was increased: 46 cases were observed with respect to 22.23 expected (SIR: 2.02). The increase was confirmed in analysis considering only the subjects without an occupationally exposure to asbestos: 19 cases among men (SIR = 2.48; 95% CI: 1.49-3.88); 11 case among women (SIR = 1.34; 95% CI: 0.67-2.40). The IRR between the two subareas is less than one in overall population considering all age-classes and of 3 fold (IRR = 3.14, 95% CI: 0.65-9.17) in the age-classes below 55 years. The findings indicate an increased incidence of pleural mesothelioma in the neighbourhood of asbestos-cement plant, and a possible etiological contribution of asbestos environmental exposure in detected risks.

  20. Identical Location Transmission Electron Microscopy Imaging of Site-Selective Pt Nanocatalysts: Electrochemical Activation and Surface Disordering.

    PubMed

    Arán-Ais, Rosa M; Yu, Yingchao; Hovden, Robert; Solla-Gullón, Jose; Herrero, Enrique; Feliu, Juan M; Abruña, Héctor D

    2015-12-02

    We have employed identical location transmission electron microscopy (IL-TEM) to study changes in the shape and morphology of faceted Pt nanoparticles as a result of electrochemical cycling; a procedure typically employed for activating platinum surfaces. We find that the shape and morphology of the as-prepared hexagonal nanoparticles are rapidly degraded as a result of potential cycling up to +1.3 V. As few as 25 potential cycles are sufficient to cause significant degradation, and after about 500-1000 cycles the particles are dramatically degraded. We also see clear evidence of particle migration during potential cycling. These finding suggest that great care must be exercised in the use and study of shaped Pt nanoparticles (and related systems) as electrocatlysts, especially for the oxygen reduction reaction where high positive potentials are typically employed.

  1. Foraging locations of double-crested cormorants on western Lake Erie: Site characteristics and spatial associations with prey fish densities

    USGS Publications Warehouse

    Stapanian, Martin A.; Bur, Michael T.; Tyson, Jeffrey T.; Seamans, Thomas W.; Blackwell, Bradley F.

    2002-01-01

    Radio-tagged double-crested cormorants (Phalacrocorax auritus) nesting on Middle Island, Ontario and unmarked cormorants in the western basin of Lake Erie were monitored in 1999. Radio-tagged cormorants were located by aircraft and by boat along regular survey routes. In addition, foraging flocks of radio-tagged and unmarked cormorants were located during the boat surveys. Approximately 79% of foraging radio-tagged individuals, and approximately 65% of all foraging flocks were observed within 2.5 km of shore. These percentages were greater than expected, based on the percentage of the area of water within 2.5 km of shore. All size classes of flocks examined were found more frequently than expected on water ≤10 m deep. Trawling data collected annually from 1988 to 1999 during the month of August were used to determine the historical distributions of the four fish species found to comprise the majority of the diet of cormorants in the area. August corresponded to a period when there is maximal overlap in the diets of cormorants and walleye (Stizostedion vitreum) in the area and when the number of foraging cormorants in the area is large. Flocks of cormorants of all size classes examined were not found proportionately more in regions that contained higher than the historical median annual catches of any of the four prey species. These results, coupled with previous bioenergetics studies, suggest that the impact of cormorants on the fishery of the western basin of Lake Erie is localized with respect to depth and distance from shore.

  2. Mixed Inhibition of cPEPCK by Genistein, Using an Extended Binding Site Located Adjacent to Its Catalytic Cleft

    PubMed Central

    Dhanjal, Jaspreet Kaur; Sundar, Durai

    2015-01-01

    Cytosolic phosphoenolpyruvate carboxykinase (cPEPCK) is a critical enzyme involved in gluconeogenesis, glyceroneogenesis and cataplerosis. cPEPCK converts oxaloacetic acid (OAA) into phosphoenol pyruvate (PEP) in the presence of GTP. cPEPCK is known to be associated with type 2 diabetes. Genistein is an isoflavone compound that shows anti-diabetic and anti-obesitic properties. Experimental studies have shown a decrease in the blood glucose level in the presence of genistein by lowering the functional activity of cPEPCK, an enzyme of gluconeogenesis. Using computational techniques such as molecular modeling, molecular docking, molecular dynamics simulation and binding free energy calculations, we identified cPEPCK as a direct target of genistein. We studied the molecular interactions of genistein with three possible conformations of cPEPCK—unbound cPEPCK (u_cPEPCK), GTP bound cPEPCK (GTP_cPEPCK) and GDP bound cPEPCK (GDP_cPEPCK). Binding of genistein was also compared with an already known cPEPCK inhibitor. We analyzed the interactions of genistein with cPEPCK enzyme and compared them with its natural substrate (OAA), product (PEP) and known inhibitor (3-MPA). Our results demonstrate that genistein uses the mechanism of mixed inhibition to block the functional activity of cPEPCK and thus can serve as a potential anti-diabetic and anti-obesity drug candidate. We also identified an extended binding site in the catalytic cleft of cPEPCK which is used by 3-MPA to inhibit cPEPCK non-competitively. We demonstrate that extended binding site of cPEPCK can further be exploited for designing new drugs against cPEPCK. PMID:26528723

  3. Using chloride and chlorine-36 as soil-water tracers to estimate deep percolation at selected locations on the U.S. Department of Energy Hanford site, Washington

    USGS Publications Warehouse

    Prych, Edmund A.

    1995-01-01

    Long-term average deep-percolation rates of water from precipitation on the U.S. Department of Energy Hanford Site in semiarid south-central Washington, as estimated by a chloride mass-balance method, range from 0.008 to 0.30 mm/yr (millimeters per year) at nine locations covered by a variety of fine-grain soils and vegetated with sagebrush and other deep-rooted plants plus sparse shallow-rooted grasses. Deep-percolation rates estimated using a chlorine-36 bomb-pulse method at three of the nine locations range from 2.1 to 3.4 mm/yr. Because the mass-balance method may underestimate percolation rates and the bomb-pulse method probably overestimates percolation rates, estimates by the two methods probably bracket actual rates. These estimates, as well as estimates by previous investigators who used different methods, are a small fraction of mean annual precipitation, which ranges from about 160 to 210 mm/yr at the different test locations. Estimates by the mass-balance method at four locations in an area that is vegetated only with sparse shallow-rooted grasses range from 0.39 to 2.0 mm/yr. Chlorine-36 data at one location in this area were sufficient only to determine that the upper limit of deep percolation is more than 5.1 mm/yr. Although estimates for locations in this area are larger than the estimates for locations with deep-rooted plants, they are at the lower end of the range of estimates for this area made by previous investigators.

  4. Hamiltonian tomography of photonic lattices

    NASA Astrophysics Data System (ADS)

    Ma, Ruichao; Owens, Clai; LaChapelle, Aman; Schuster, David I.; Simon, Jonathan

    2017-06-01

    In this paper we introduce an approach to Hamiltonian tomography of noninteracting tight-binding photonic lattices. To begin with, we prove that the matrix element of the low-energy effective Hamiltonian between sites α and β may be obtained directly from Sα β(ω ) , the (suitably normalized) two-port measurement between sites α and β at frequency ω . This general result enables complete characterization of both on-site energies and tunneling matrix elements in arbitrary lattice networks by spectroscopy, and suggests that coupling between lattice sites is a topological property of the two-port spectrum. We further provide extensions of this technique for measurement of band projectors in finite, disordered systems with good band flatness ratios, and apply the tool to direct real-space measurement of the Chern number. Our approach demonstrates the extraordinary potential of microwave quantum circuits for exploration of exotic synthetic materials, providing a clear path to characterization and control of single-particle properties of Jaynes-Cummings-Hubbard lattices. More broadly, we provide a robust, unified method of spectroscopic characterization of linear networks from photonic crystals to microwave lattices and everything in between.

  5. Sequence preferences of DNA interstrand crosslinking agents: quantitation of interstrand crosslink locations in DNA duplex fragments containing multiple crosslinkable sites.

    PubMed Central

    Millard, J T; Weidner, M F; Kirchner, J J; Ribeiro, S; Hopkins, P B

    1991-01-01

    A general approach to the quantitative study of the sequence specificity of DNA interstrand crosslinking agents in synthetic duplex DNA fragments is described. In the first step, a DNA fragment previously treated with an interstrand crosslinking agent is subjected to denaturing PAGE. Not only does this distinguish crosslinked from native or monoadducted DNA, it is shown herein that isomeric crosslinked DNAs differing in position of the crosslink can in some cases be separated. In the second stage, the now fractionated crosslinked DNAs isolated from denaturing PAGE are subjected to fragmentation using iron(II)/EDTA. For those fractions which are structurally homogeneous, analysis of the resulting fragment distribution has previously been shown to reveal the crosslink position at nucleotide resolution. It is shown herein that in fractions which are structurally heterogeneous due to differences in position of crosslink, this analysis quantifies the relative extent of crosslinking at distinct sites. Using this method it is shown that reductively activated mitomycin C crosslinks the duplex sequences 5'-GCGC and 5'-TCGA with 3 +/- 1:1 relative efficiency. Images PMID:1903204

  6. Vulvar hidradenoma papilliferum (HP) is located on the sites of mammary-like anogenital glands (MLAGs): Analysis of the photographs of 52 tumors.

    PubMed

    El-Khoury, Jinane; Renald, Marie-Hélène; Plantier, Françoise; Avril, Marie-Françoise; Moyal-Barracco, Micheline

    2016-08-01

    Hidradenoma papilliferum (HP) is a benign tumor that primarily affects the anogenital area of adult women. Previously considered apocrine tumors, anogenital HP tumors are now interpreted as adenomas of mammary-like anogenital glands based on their histologic features. This clinical study was undertaken to determine whether vulvar HP is located on mammary-like anogenital gland sites and to describe its morphologic features. The clinical photographs of 52 histologically confirmed vulvar HP provided by 7 vulva specialists were analyzed. In all, 90.4% of the HP were located on the interlabial sulcus, adjacent zone, or the perineum. These tumors were polymorphous in terms of number (1 or multiple), size (<1-4.5 cm), color (pink, red, blue), surface (ulcerated or not), and architecture (unilobular or multilobular). Eight histologic reports could not be reviewed by the authors but the contributors confirmed that the photographs sent were only those of histologically confirmed HPs. Vulvar HP is mainly located on mammary-like anogenital gland sites, thereby providing further evidence to their histogenesis. Although a nonulcerated or ulcerated tumor of the interlabial sulcus should evoke a HP diagnosis, the latter must be confirmed histologically. Copyright © 2016 American Academy of Dermatology, Inc. Published by Elsevier Inc. All rights reserved.

  7. Probing the location of the substrate binding site of ascorbate oxidase near type 1 copper: an investigation through spectroscopic, inhibition and docking studies.

    PubMed

    Santagostini, Laura; Gullotti, Michele; De Gioia, Luca; Fantucci, Piercarlo; Franzini, Elena; Marchesini, Augusto; Monzani, Enrico; Casella, Luigi

    2004-05-01

    The present investigation addresses the problem of the binding mode of phenolic inhibitors and the substrate ascorbate to the active site of ascorbate oxidase. The results from both types of compounds indicate that the binding site is located in a pocket near the type 1 copper center. This information is of general interest for blue multicopper oxidases. Docking calculations performed on the ascorbate oxidase-ascorbate complex show that binding of the substrate occurs in a pocket near type 1 Cu, and is stabilized by at least five hydrogen bonding interactions with protein residues, one of which involves the His512 Cu ligand. Similar docking studies show that the isomeric fluorophenols, which act as competitive inhibitors toward ascorbate, bind to the enzyme in a manner similar to ascorbate. The docking calculations are supported by 19F NMR relaxation measurements performed on fluorophenols in the presence of the enzyme, which show that the bound inhibitors undergo enhanced relaxation by the paramagnetic effect of a nearby Cu center. Unambiguous support to the location of the inhibitor close to type 1 Cu was obtained by comparative relaxation measurements of the fluorophenols in the presence of the ascorbate oxidase derivative where a Zn atom selectively replaces the paramagnetic type 2 Cu. The latter experiments show that contribution to relaxation of the bound inhibitors by the type 2 Cu site is negligible.

  8. The importance of location and orientation of male specific lethal complex binding sites of differing affinities on reporter gene dosage compensation in Drosophila.

    PubMed

    Schiemann, Anja H; Weake, Vikki M; Li, Fang; Laverty, Corey; Belikoff, Esther J; Scott, Maxwell J

    2010-11-26

    The male specific lethal (MSL) complex is required for X chromosome dosage compensation in Drosophila. The complex binds to most actively transcribed X-linked genes in males and upregulates expression. High resolution chromatin immunoprecipitation assays have identified over one hundred high affinity binding sites on the X chromosome. One of the first high affinity sites discovered is at cytological location 18D11. The MSL complex binds weakly to a single copy of a 510bp fragment from 18D11 but strongly to a tetramer of the fragment. Here we have investigated the effect of insertion of sites of differing affinities, either upstream or within the transcribed gene, on complex binding and transcription upregulation. Insertion of four copies of the 18D11 fragment upstream or at the 3' end of a reporter gene led to strong MSL complex binding and increased expression in males. In contrast, the MSL complex did not bind consistently to autosomal transgenes that contained a single copy of the 18D11 site upstream of the gene promoter. However, MSL complex binding was observed in all lines if the single 18D11 fragment was inserted into the 3' end of the reporter gene in either orientation. This is consistent with previous studies that showed gene transcription facilitates MSL complex binding. Surprisingly, transcription elevation in males was only observed if the 18D11 fragment was in the forward orientation and only in some lines. Our results suggest that MSL complex binding to weaker sites and transcription enhancement is influenced by gene transcription, binding site orientation and the local chromatin environment. In contrast, strong binding sites do not need to be transcribed to recruit sufficient complex to cause transcription elevation of nearby genes.

  9. Programmatic implications of implementing the relational algebraic capacitated location (RACL) algorithm outcomes on the allocation of laboratory sites, test volumes, platform distribution and space requirements.

    PubMed

    Cassim, Naseem; Smith, Honora; Coetzee, Lindi M; Glencross, Deborah K

    2017-01-01

    CD4 testing in South Africa is based on an integrated tiered service delivery model that matches testing demand with capacity. The National Health Laboratory Service has predominantly implemented laboratory-based CD4 testing. Coverage gaps, over-/under-capacitation and optimal placement of point-of-care (POC) testing sites need investigation. We assessed the impact of relational algebraic capacitated location (RACL) algorithm outcomes on the allocation of laboratory and POC testing sites. The RACL algorithm was developed to allocate laboratories and POC sites to ensure coverage using a set coverage approach for a defined travel time (T). The algorithm was repeated for three scenarios (A: T = 4; B: T = 3; C: T = 2 hours). Drive times for a representative sample of health facility clusters were used to approximate T. Outcomes included allocation of testing sites, Euclidian distances and test volumes. Additional analysis included platform distribution and space requirement assessment. Scenarios were reported as fusion table maps. Scenario A would offer a fully-centralised approach with 15 CD4 laboratories without any POC testing. A significant increase in volumes would result in a four-fold increase at busier laboratories. CD4 laboratories would increase to 41 in scenario B and 61 in scenario C. POC testing would be offered at two sites in scenario B and 20 sites in scenario C. The RACL algorithm provides an objective methodology to address coverage gaps through the allocation of CD4 laboratories and POC sites for a given T. The algorithm outcomes need to be assessed in the context of local conditions.

  10. Programmatic implications of implementing the relational algebraic capacitated location (RACL) algorithm outcomes on the allocation of laboratory sites, test volumes, platform distribution and space requirements

    PubMed Central

    2017-01-01

    Introduction CD4 testing in South Africa is based on an integrated tiered service delivery model that matches testing demand with capacity. The National Health Laboratory Service has predominantly implemented laboratory-based CD4 testing. Coverage gaps, over-/under-capacitation and optimal placement of point-of-care (POC) testing sites need investigation. Objectives We assessed the impact of relational algebraic capacitated location (RACL) algorithm outcomes on the allocation of laboratory and POC testing sites. Methods The RACL algorithm was developed to allocate laboratories and POC sites to ensure coverage using a set coverage approach for a defined travel time (T). The algorithm was repeated for three scenarios (A: T = 4; B: T = 3; C: T = 2 hours). Drive times for a representative sample of health facility clusters were used to approximate T. Outcomes included allocation of testing sites, Euclidian distances and test volumes. Additional analysis included platform distribution and space requirement assessment. Scenarios were reported as fusion table maps. Results Scenario A would offer a fully-centralised approach with 15 CD4 laboratories without any POC testing. A significant increase in volumes would result in a four-fold increase at busier laboratories. CD4 laboratories would increase to 41 in scenario B and 61 in scenario C. POC testing would be offered at two sites in scenario B and 20 sites in scenario C. Conclusion The RACL algorithm provides an objective methodology to address coverage gaps through the allocation of CD4 laboratories and POC sites for a given T. The algorithm outcomes need to be assessed in the context of local conditions.

  11. Use of Transient Electromagnetic Soundings (tem) to Locate Urban Solid Wastes Disposal Sites, in Coatzacoalcos, Veracruz, Mexico.

    NASA Astrophysics Data System (ADS)

    Gonzalez-Moran, T.; Hurtado, M.

    2003-12-01

    Anthropogenic activities and their impact cause complex alterations in the natural quality of superficial and groundwater. Urban solid waste disposal represented an important source of contamination of groundwater. One of the main problems of the Coatzacoalcos, Veracruz area is the urgent necessity to close some dumps, actually in operation. At present, the municipal government has the project of selecting an urban waste disposal site that fulfills the official ecological norms, with appropriate geologic conditions and a useful life of 15 years. Study area, El Rebozo 1, is covered for sandy - clays from Filisola Formation. Also has outcrops of shales belonging to the Nanchital Formation. This Formation presents low porosity and permeability. It could serve as container in the construction of the landfill. We carried out 6 transient electromagnetic soundings (TEM), to determine the thickness and distribution of this formation in depth and to establish the existence of aquifers. The geophysical studies were carried out along a line of 680 m, with variable separation among stations between 150 m to 250 m, crossing the study area in SW direction. Results of TEM survey, geological, hydrological information and drilling survey confirmed the wide distribution in the studied area of the shale layer from the Nanchital Formation. The average thickness of the shale layer is 70 m and it presents low possibilities of storing an important aquifer. It could be considered as an impermeable layer that can be used as base for the construction of the landfill. Underlying the shale layer there are sandy-clays that could reduce the possible lixiviation from the landfill. Use of TEM provides larger advantages than the conventional electric methods (SEV's) and also more detailed information on the geologic and hydro-geologic conditions from the underground. The integration of geophysical methods with other disciplines allows more integrated systematic research in hydrogeology and

  12. Physical Map of the Channel Catfish Virus Genome: Location of Sites for Restriction Endonucleases EcoRI, HindIII, HpaI, and XbaI

    PubMed Central

    Chousterman, Suzanne; Lacasa, Michel; Sheldrick, Peter

    1979-01-01

    The overall arrangement of nucleotide sequences in the DNA of channel catfish virus has been studied by cleavage with four restriction endonucleases. Physical maps have been developed for the location of sites for EcoRI, HindIII, HpaI, and XbaI. The sum of the molecular weights of fragments generated by each restriction enzyme indicates a molecular weight of approximately 86 × 106 for the channel catfish virus genome. Fragments corresponding to the molecular ends of channel catfish virus DNA have been identified by their sensitivity to exonuclease treatment. The distribution of restriction sites in the genome shows that sequences included in a 12 × 106-molecular weight region at one end are repeated with direct polarity at the other end, and that the overall genomic sequence order is nonpermuted. Images PMID:16789182

  13. A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes.

    PubMed

    Bazak, Lily; Haviv, Ami; Barak, Michal; Jacob-Hirsch, Jasmine; Deng, Patricia; Zhang, Rui; Isaacs, Farren J; Rechavi, Gideon; Li, Jin Billy; Eisenberg, Eli; Levanon, Erez Y

    2014-03-01

    RNA molecules transmit the information encoded in the genome and generally reflect its content. Adenosine-to-inosine (A-to-I) RNA editing by ADAR proteins converts a genomically encoded adenosine into inosine. It is known that most RNA editing in human takes place in the primate-specific Alu sequences, but the extent of this phenomenon and its effect on transcriptome diversity are not yet clear. Here, we analyzed large-scale RNA-seq data and detected ∼1.6 million editing sites. As detection sensitivity increases with sequencing coverage, we performed ultradeep sequencing of selected Alu sequences and showed that the scope of editing is much larger than anticipated. We found that virtually all adenosines within Alu repeats that form double-stranded RNA undergo A-to-I editing, although most sites exhibit editing at only low levels (<1%). Moreover, using high coverage sequencing, we observed editing of transcripts resulting from residual antisense expression, doubling the number of edited sites in the human genome. Based on bioinformatic analyses and deep targeted sequencing, we estimate that there are over 100 million human Alu RNA editing sites, located in the majority of human genes. These findings set the stage for exploring how this primate-specific massive diversification of the transcriptome is utilized.

  14. The -14010*C variant associated with lactase persistence is located between an Oct-1 and HNF1α binding site and increases lactase promoter activity.

    PubMed

    Jensen, Tine G K; Liebert, Anke; Lewinsky, Rikke; Swallow, Dallas M; Olsen, Jørgen; Troelsen, Jesper T

    2011-10-01

    In most people worldwide intestinal lactase expression declines in childhood. In many others, particularly in Europeans, lactase expression persists into adult life. The lactase persistence phenotype is in Europe associated with the -13910*T single nucleotide variant located 13,910 bp upstream the lactase gene in an enhancer region that affects lactase promoter activity. This variant falls in an Oct-1 binding site and shows greater Oct-1 binding than the ancestral variant and increases enhancer activity. Several other variants have been identified very close to the -13910 position, which are associated with lactase persistence in the Middle East and Africa. One of them, the -14010*C, is associated with lactase persistence in Africa. Here we show by deletion analysis that the -14010 position is located in a 144 bp region that reduces the enhancer activity. In transfections the -14010*C allele shows a stronger enhancer effect than the ancestral -4010*G allele. Binding sites for Oct-1 and HNF1α surrounding the -14010 position were identified by gel shift assays, which indicated that -14010*C has greater binding affinity to Oct-1 than -14010*G.

  15. Accurately mapping the location of the binding site for the interaction between hepatitis B virus X protein and cytochrome c oxidase III

    PubMed Central

    LI, DAN; DING, JIAN; CHEN, ZHIXIN; CHEN, YUN; LIN, NA; CHEN, FENGLIN; WANG, XIAOZHONG

    2015-01-01

    The hepatitis B virus (HBV) X protein (HBx) plays an important pathogenetic role in hepatocarcinoma tumorigenesis. As HBx does not have the ability to bind to double-stranded DNA (dsDNA), protein-protein interaction is crucial for HBx functions. In a previous study, we screened a novel HBx-interacting protein, the cytochrome c oxidase subunit III (COXIII). In the present study, we aimed to accurately map the location of the binding site for the interaction of HBx with COXIII. Two fragments of HBx mutants (X1 aa1-72 and X2 aa1-117) were amplified by polymerase chain reaction (PCR) and separately inserted into the pAS2-1 plasmid. PCR and gene sequencing confirmed the correct insertion of the mutant fragments in the plasmid. The tanscription of the mutant fragments in yeast cells was demonstrated by RT-PCR and western blot analysis confirmed that they were accurately translated into fusion proteins. Hybridization on solid medium and the detection of β-galactosidase (β-gal) activity indicated that the binding site for the interaction between HBx and COXIII was located between aa72 and aa117. Specific interactions between the HBxX2 protein and COXIII were verified by co-immunoprecipitation. To the best of our knowledge, this is the first study showing to demonstrate that aa72-117 in HBx is the key region for binding with COXIII. PMID:25483779

  16. Polarization response of RHIC electron lens lattices

    DOE PAGES

    Ranjbar, V. H.; Méot, F.; Bai, M.; ...

    2016-10-10

    Depolarization response for a system of two orthogonal snakes at irrational tunes is studied in depth using lattice independent spin integration. Particularly, we consider the effect of overlapping spin resonances in this system, to understand the impact of phase, tune, relative location and threshold strengths of the spin resonances. Furthermore, these results are benchmarked and compared to two dimensional direct tracking results for the RHIC e-lens lattice and the standard lattice. We then consider the effect of longitudinal motion via chromatic scans using direct six dimensional lattice tracking.

  17. Polarization response of RHIC electron lens lattices

    NASA Astrophysics Data System (ADS)

    Ranjbar, V. H.; Méot, F.; Bai, M.; Abell, D. T.; Meiser, D.

    2016-10-01

    Depolarization response for a system of two orthogonal snakes at irrational tunes is studied in depth using lattice independent spin integration. In particular we consider the effect of overlapping spin resonances in this system, to understand the impact of phase, tune, relative location and threshold strengths of the spin resonances. These results are benchmarked and compared to two dimensional direct tracking results for the RHIC e-lens lattice and the standard lattice. Finally we consider the effect of longitudinal motion via chromatic scans using direct six dimensional lattice tracking.

  18. mRNA 3' of the A site bound codon is located close to protein S3 on the human 80S ribosome.

    PubMed

    Molotkov, Maxim V; Graifer, Dmitri M; Popugaeva, Elena A; Bulygin, Konstantin N; Meschaninova, Maria I; Ven'yaminova, Aliya G; Karpova, Galina G

    2006-07-01

    Ribosomal proteins neighboring the mRNA downstream of the codon bound at the decoding site of human 80S ribosomes were identified using three sets of mRNA analogues that contained a UUU triplet at the 5' terminus and a perfluorophenylazide cross-linker at guanosine, adenosine or uridine residues placed at various locations 3' of this triplet. The positions of modified mRNA nucleotides on the ribosome were governed by tRNA(Phe) cognate to the UUU triplet targeted to the P site. Upon mild UV-irradiation, the mRNA analogues cross-linked preferentially to the 40S subunit, to the proteins and to a lesser extent to the 18S rRNA. Cross-linked nucleotides of 18S rRNA were identified previously. In the present study, it is shown that among the proteins the main target for cross-linking with all the mRNA analogues tested was protein S3 (homologous to prokaryotic S3, S3p); minor cross-linking to protein S2 (S5p) was also detected. Both proteins cross-linked to mRNA analogues in the ternary complexes as well as in the binary complexes (without tRNA). In the ternary complexes protein S15 (S19p) also cross-linked, the yield of the cross-link decreased significantly when the modified nucleotide moved from position +5 to position +12 with respect to the first nucleotide of the P site bound codon. In several ternary complexes minor cross-linking to protein S30 was likewise detected. The results of this study indicate that S3 is a key protein at the mRNA binding site neighboring mRNA downstream of the codon at the decoding site in the human ribosome.

  19. Physics development of web-based tools for use in hardware clusters doing lattice physics

    SciTech Connect

    P. Dreher; Walt Akers; Jian-ping Chen; Y. Chen; William A. Watson III

    2002-03-01

    Jefferson Lab and MIT are developing a set of web-based tools within the Lattice Hadron Physics Collaboration to allow lattice QCD theorists to treat the computational facilities located at the two sites as a single meta-facility. The prototype Lattice Portal provides researchers the ability to submit jobs to the cluster, browse data caches, and transfer files between cache and off-line storage. The user can view the configuration of the PBS servers and to monitor both the status of all batch queues as well as the jobs in each queue. Work is starting on expanding the present system to include job submissions at the meta-facility level (shared queue), as well as multi-site file transfers and enhanced policy-based data management capabilities.

  20. Increased fluoroquinolone resistance with time in Escherichia coli from >17,000 patients at a large county hospital as a function of culture site, age, sex, and location

    PubMed Central

    Boyd, Lauren Becnel; Atmar, Robert L; Randall, Graham L; Hamill, Richard J; Steffen, David; Zechiedrich, Lynn

    2008-01-01

    Background Escherichia coli infections are common and often treated with fluoroquinolones. Fluoroquinolone resistance is of worldwide importance and is monitored by national and international surveillance networks. In this study, we analyzed the effects of time, culture site, and patient age, sex, and location on fluoroquinolone resistance in E. coli clinical isolates. Methods To understand how patient factors and time influenced fluoroquinolone resistance and to determine how well data from surveillance networks predict trends at Ben Taub General Hospital in Houston, TX, we used Perl to parse and MySQL to house data from antibiograms (n ≅ 21,000) for E. coli isolated between 1999 to 2004 using Chi Square, Bonferroni, and Multiple Linear Regression methods. Results Fluoroquinolone resistance (i) increased with time; (ii) exceeded national averages by 2- to 4-fold; (iii) was higher in males than females, largely because of urinary isolates from male outpatients; (iv) increased with patient age; (v) was 3% in pediatric patients; (vi) was higher in hospitalized patients than outpatients; (vii) was higher in sputum samples, particularly from inpatients, than all other culture sites, including blood and urine, regardless of patient location; and (viii) was lowest in genital isolates than all other culture sites. Additionally, the data suggest that, with regard to susceptibility or resistance by the Dade Behring MicroScan system, a single fluoroquinolone suffices as a "surrogate marker" for all of the fluoroquinolone tested. Conclusion Large surveillance programs often did not predict E. coli fluoroquinolone resistance trends at a large, urban hospital with a largely indigent, ethnically diverse patient population or its affiliated community clinics. PMID:18197977

  1. A single-use site selection technique, using GIS, for aquaculture planning: choosing locations for mangrove oyster raft culture in Margarita Island, Venezuela.

    PubMed

    Buitrago, Joaquín; Rada, Martín; Hernández, Hernando; Buitrago, Esperanza

    2005-05-01

    Oyster culture has a potential to generate income for coastal communities and to lessen pressure on natural overexploited populations. A project to transfer mangrove oyster Crassostrea rhizophorae raft culture technology to selected coastal communities in Margarita Island, Venezuela is being developed, and an optimum location selection technique was devised. To pick the variables or factors that determine site suitability, a bibliographic database was made, aspects of interest chosen, and the most comprehensive ones singled out, eliminating redundant ones. Twenty variables were grouped in criteria based on the way they influence the project. Variables were classified as intrinsic environmental, environmental extrinsic, logistic, and socioeconomic criteria. Thirty-five experts were asked to evaluate the factors and to score each according to their suitability weight. Logistic criterion received the highest values, followed by environmental extrinsic issues. A Geographic Information System using a base map compiled from 1:25,000 scale maps was developed. A thematic map for each factor was completed, dividing graphically the 3896-km2 study area into polygons of equal weight for each factor. The Multi-Criteria Evaluation (MCE) was used to combine the variables. Resultant vectors in thematic maps were added to obtain smaller polygons with the same value sum. Finally, MCE was used to generate a final output: the optimum sites for oyster aquaculture resulting from the added values of over 3000 polygons in the maps, for the 20 criteria. Higher scores were reached in 13 areas covering 4.1 km2, those places having the optimum conditions for oyster raft aquaculture in the region. Additional locations meeting 75% to 70% of the demanded criteria for a final suitable selection cover 137 sites encompassing 37.5 km2.

  2. Correlation Effects in One-Dimensional Quasiperiodic Anderson-Lattice Model

    NASA Astrophysics Data System (ADS)

    Matsuda, Fuyuki; Tezuka, Masaki; Kawakami, Norio

    We consider the one-dimensional (1D) quasiperiodic Anderson-lattice model, which has quasiperiodically ordered impurities. The sites with an f-orbital are ordered as a "Fibonacci word", one way to form 1D quasiperiodic orderings. To treat the correlation effect precisely, we use the density matrix renormalization group (DMRG) method. We show that the spin correlation function in the quasiperiodic system gives a characteristic pattern. Also, by analyzing the f-electron number and its fluctuation, we find that a valence transition, which usually occurs in the periodic Anderson model when the on-site interorbital interaction is large, is not sharp in the quasiperiodic system. Finally, we discuss the properties of the quasiperiodic Anderson-lattice model, comparing them against the Anderson-lattice model with randomly located f-orbitals. We find that the quasiperiodic Anderson-lattice model has a similar property to the periodic Anderson model for spin correlation, but also has a similar property to the Anderson-lattice model with randomly located f-orbitals for the valence fluctuation.

  3. The role of intra- and inter-site exchange correlations in the extended Falicov-Kimball model on a triangular lattice

    NASA Astrophysics Data System (ADS)

    Kumar, Sant; Yadav, Umesh K.; Maitra, T.; Singh, Ishwar

    2016-02-01

    Ground state magnetic properties of the spin-dependent Falicov-Kimball model (FKM) are studied by incorporating the intrasite exchange correlation J (between itinerant d- and localized f-electrons) and intersite (superexchange) correlation Jse (between localized f-electrons) on a triangular lattice for two different fillings. Numerical diagonalization and Monte-Carlo techniques are used to determine the ground state magnetic properties. Transitions from antiferromagnetic to ferromagnetic and again to re-entrant antiferromagnetic phase is observed in a wide range of parameter space. The magnetic moments of d- and f-electrons are observed to depend strongly on the value of J, Jse and also on the total number of d-electrons (Nd).

  4. Location of protein S1 of Escherichia coli ribosomes at the 'A'-site of the codon binding site. Affinity labeling studies with a 3'-modified A-U-G analog.

    PubMed Central

    Pongs, O; Stöffler, G; Bald, R W

    1976-01-01

    An affinity analog with a 5-bromoacetamido uridine 5'-phosphate moiety bonded to the 3' end of A-U-G has been prepared with the aid of polynucleotide phosphorylase. This 3'-modified, chemically reactive A-U-G analog was used to probe the ribosomal codon binding site. The yield of the reaction depended strongly on the ribosomal source and was sensitive to salt-washing ribosomes. The major crosslinking product was identified to be protein S1. Since the reaction of this 3'-modified A-U-G programmed ribosomes for Met-tRNA-Met-M binding, it is concluded that protein S1 is located at or near the 3'-side of the ribosomal codon binding site. Images PMID:823527

  5. Potts and percolation models on bowtie lattices.

    PubMed

    Ding, Chengxiang; Wang, Yancheng; Li, Yang

    2012-08-01

    We give the exact critical frontier of the Potts model on bowtie lattices. For the case of q = 1, the critical frontier yields the thresholds of bond percolation on these lattices, which are exactly consistent with the results given by Ziff et al. [J. Phys. A 39, 15083 (2006)]. For the q = 2 Potts model on a bowtie A lattice, the critical point is in agreement with that of the Ising model on this lattice, which has been exactly solved. Furthermore, we do extensive Monte Carlo simulations of the Potts model on a bowtie A lattice with noninteger q. Our numerical results, which are accurate up to seven significant digits, are consistent with the theoretical predictions. We also simulate the site percolation on a bowtie A lattice, and the threshold is s(c) = 0.5479148(7). In the simulations of bond percolation and site percolation, we find that the shape-dependent properties of the percolation model on a bowtie A lattice are somewhat different from those of an isotropic lattice, which may be caused by the anisotropy of the lattice.

  6. Spatiotemporal surface solitons in two-dimensional photonic lattices.

    PubMed

    Mihalache, Dumitru; Mazilu, Dumitru; Lederer, Falk; Kivshar, Yuri S

    2007-11-01

    We analyze spatiotemporal light localization in truncated two-dimensional photonic lattices and demonstrate the existence of two-dimensional surface light bullets localized in the lattice corners or the edges. We study the families of the spatiotemporal surface solitons and their properties such as bistability and compare them with the modes located deep inside the photonic lattice.

  7. Assessment of alternatives for long-term management of uranium ore residues and contaminated soils located at DOE's Niagara Falls Storage Site

    SciTech Connect

    Merry-Libby, P.

    1984-11-05

    About 11,000 m/sup 3/ of uranium ore residues and 180,000 m/sup 3/ of wastes (mostly slightly contaminated soils) are consolidated within a diked containment area at the Niagara Falls Storage Site (NFSS) located about 30 km north of Buffalo, NY. The residues account for less than 6% of the total volume of contaminated materials but almost 99% of the radioactivty. The average /sup 226/Ra concentration in the residues is 67,000 pCi/g. Several alternatives for long-term management of the wastes and residues are being considered, including: improvement of the containment at NFSS, modification of the form of the residues, management of the residues separately from the wastes, management of the wastes and residues at another humid site (Oak Ridge, TN) or arid site (Hanford, WA), and dispersal of the wastes in the ocean. Potential radiological risks are expected to be smaller than the nonradiological risks of occupational and transportation-related injuries and deaths. Dispersal of the slightly contaminated wastes in the ocean is not expected to result in any significant impacts on the ocean environment or pose any significant radiological risk to humans. It will be necessary to take perpetual care of the near-surface burial sites because the residues and wastes will remain hazardous for thousands of years. If controls cease, the radioactive materials will eventually be dispersed in the environment. Predicted loss of the earthen covers over the buried materials ranges from several hundred to more than two million years, depending primarily on the use of the land surface. Groundwater will eventually be contaminated in all alternatives; however, the groundwater pathway is relatively insignificant with respect to radiological risks to the general population. A person intruding into the residues would incur an extremely high radiation dose.

  8. Assessment of the environmental impact of landfill sites with open combustion located in arid regions by combined chemical and ecotoxicological studies.

    PubMed

    Wichmann, H; Kolb, M; Jopke, P; Schmidt, C; Alawi, M; Bahadir, M

    2006-12-01

    Two different waste disposal sites in Jordan were investigated in order to determine the environmental situation in context with waste disposal techniques. One landfill, located at Marka/Amman, had been closed about 25 years ago and covered with soil. Here, the waste had been actively open combusted and openings in the cover, still emitting smoke, indicated that waste was still smoldering inside the landfill's body. The second disposal site close to Ekeeder/Irbid is still operated. On this ground, the solid waste is not intentionally burned, although spontaneous fires frequently come up. Samples of waste, soil, and entrained dust were collected and analyzed. From the solid samples, respectively, their eluates, sum parameters, ecotoxicological effects as well as contents of elements/heavy metals and organic pollutants (PAH, PCDD/F) were determined. In general, the Ekeeder-samples were low-contaminated. The investigation of the Marka-samples showed higher contamination of the site's center, clearly being influenced by combustion processes. A significant contamination of the landfill's vicinity by its emissions could not be derived from the analytical data. Ecotoxicological investigations, applying a bio-test battery, revealed correlations with the sum parameters but not with the trace pollutants. Thus, the Marka-samples with the highest measured values of sum parameters caused adverse effects on three different test species, whereas other samples from Marka and Ekeeder had small or no effects. The results of these investigations depict the influence of different disposal techniques on the contamination situation of a landfill and they shall contribute to assess the conditions of other disposal sites in (semi)arid regions.

  9. Unbiased sampling of lattice Hamilton path ensembles

    NASA Astrophysics Data System (ADS)

    Mansfield, Marc L.

    2006-10-01

    Hamilton paths, or Hamiltonian paths, are walks on a lattice which visit each site exactly once. They have been proposed as models of globular proteins and of compact polymers. A previously published algorithm [Mansfield, Macromolecules 27, 5924 (1994)] for sampling Hamilton paths on simple square and simple cubic lattices is tested for bias and for efficiency. Because the algorithm is a Metropolis Monte Carlo technique obviously satisfying detailed balance, we need only demonstrate ergodicity to ensure unbiased sampling. Two different tests for ergodicity (exact enumeration on small lattices, nonexhaustive enumeration on larger lattices) demonstrate ergodicity unequivocally for small lattices and provide strong support for ergodicity on larger lattices. Two other sampling algorithms [Ramakrishnan et al., J. Chem. Phys. 103, 7592 (1995); Lua et al., Polymer 45, 717 (2004)] are both known to produce biases on both 2×2×2 and 3×3×3 lattices, but it is shown here that the current algorithm gives unbiased sampling on these same lattices. Successive Hamilton paths are strongly correlated, so that many iterations are required between statistically independent samples. Rules for estimating the number of iterations needed to dissipate these correlations are given. However, the iteration time is so fast that the efficiency is still very good except on extremely large lattices. For example, even on lattices of total size 10×10×10 we are able to generate tens of thousands of uncorrelated Hamilton paths per hour of CPU time.

  10. Evaluation of National Atmospheric Deposition Program measurements for co-located Sites CO89 and CO98 at Rocky Mountain National Park, 2012

    USGS Publications Warehouse

    ,

    2013-01-01

    Median weekly absolute percent differences for selected parameters including: sample volume, 8.0 percent; ammonium concentration, 9.1 percent; nitrate concentration, 8.5 percent; sulfate concentration, 10.2 percent. Annual precipitation-weighted mean concentrations were higher for CO98 compared to CO89 for all analytes. The chemical concentration record for CO98 contains more valid samples than the CO89 record. Therefore, the CO98 record is more representative of 2012 total annual deposition at Loch Vale. Daily precipitation-depth records for the co-located precipitation gages were 100 percent complete, and the total annual precipitation depths between the sites differed by 0.1 percent for the year (91.5 and 91.4 cm).

  11. Analysis of the effects of ionospheric sampling of reflection points near-path, for high-frequency single-site-location direction finding systems. Master's thesis

    SciTech Connect

    Filho, C.A.

    1990-12-01

    This thesis suggests a method to estimate the current value of an ionospheric parameter. The proposed method is based on the known variability of the observed current values near path and utilizes data derived from ionospheric sampling measurements. Analysis of errors is provided in Single-Site-Location High-Frequency Direction Finding (SSL-HFDF), arising from ionospheric irregularities such as Es (sporadic E), ionospheric tilts, and traveling ionospheric disturbances (TIDs). The characteristics of Es, tilts and TIDs for mid-latitudes are summarized in tables. The spatial and temporal coherence of ionospheric variabilities and irregularities is analyzed over the electron density. Practical results, measurements, and studies are presented on SSL-HFDF. A survey of characteristics of the ionosphere in the equatorial region is also provided. Finally, some recommendations are given to maximize the applicability of the proposed method.

  12. VA Health Care Facilities Locator

    MedlinePlus

    ... VA » Locations » Find Locations Locations Find Locations The javascript used here is for validation purpose only. Your browser doesn't seem to support javascript or has it disabled. This site is a ...

  13. Quantum theory of cold bosonic atoms in optical lattices

    SciTech Connect

    Tilahun, Dagim; Duine, R. A.; MacDonald, A. H.

    2011-09-15

    Ultracold atoms in optical lattices undergo a quantum phase transition from a superfluid to a Mott insulator as the lattice potential depth is increased. We describe an approximate theory of interacting bosons in optical lattices which provides a qualitative description of both superfluid and insulator states. The theory is based on a change of variables in which the boson coherent state amplitude is replaced by an effective potential which promotes phase coherence between different number states on each lattice site. It is illustrated here by applying it to uniform and fully frustrated lattice cases but is simple enough that it can be applied to spatially inhomogeneous lattice systems.

  14. Sourcebook of locations of geophysical surveys in tunnels and horizontal holes, including results of seismic refraction surveys, Rainier Mesa, Aqueduct Mesa, and Area 16, Nevada Test Site

    USGS Publications Warehouse

    Carroll, R.D.; Kibler, J.E.

    1983-01-01

    Seismic refraction surveys have been obtained sporadically in tunnels in zeolitized tuff at the Nevada Test Site since the late 1950's. Commencing in 1967 and continuing to date (1982), .extensive measurements of shear- and compressional-wave velocities have been made in five tunnel complexes in Rainier and Aqueduct Mesas and in one tunnel complex in Shoshone Mountain. The results of these surveys to 1980 are compiled in this report. In addition, extensive horizontal drilling was initiated in 1967 in connection with geologic exploration in these tunnel complexes for sites for nuclear weapons tests. Seismic and electrical surveys were conducted in the majority of these holes. The type and location of these tunnel and borehole surveys are indexed in this report. Synthesis of the seismic refraction data indicates a mean compressional-wave velocity near the nuclear device point (WP) of 23 tunnel events of 2,430 m/s (7,970 f/s) with a range of 1,846-2,753 m/s (6,060-9,030 f/s). The mean shear-wave velocity of 17 tunnel events is 1,276 m/s (4,190 f/s) with a range of 1,140-1,392 m/s (3,740-4,570 f/s). Experience indicates that these velocity variations are due chiefly to the extent of fracturing and (or) the presence of partially saturated rock in the region of the survey.

  15. A New F131V Mutation in Chlamydomonas Phytoene Desaturase Locates a Cluster of Norflurazon Resistance Mutations near the FAD-Binding Site in 3D Protein Models

    PubMed Central

    Suarez, Julio V.; Banks, Stephen; Thomas, Paul G.; Day, Anil

    2014-01-01

    The green alga Chlamydomonas reinhardtii provides a tractable genetic model to study herbicide mode of action using forward genetics. The herbicide norflurazon inhibits phytoene desaturase, which is required for carotenoid synthesis. Locating amino acid substitutions in mutant phytoene desaturases conferring norflurazon resistance provides a genetic approach to map the herbicide binding site. We isolated a UV-induced mutant able to grow in very high concentrations of norflurazon (150 µM). The phytoene desaturase gene in the mutant strain contained the first resistance mutation to be localised to the dinucleotide-binding Rossmann-likedomain. A highly conserved phenylalanine amino acid at position 131 of the 564 amino acid precursor protein was changed to a valine in the mutant protein. F131, and two other amino acids whose substitution confers norflurazon resistance in homologous phytoene desaturase proteins, map to distant regions in the primary sequence of the C. reinhardtii protein (V472, L505) but in tertiary models these residues cluster together to a region close to the predicted FAD binding site. The mutant gene allowed direct 5 µM norflurazon based selection of transformants, which were tolerant to other bleaching herbicides including fluridone, flurtamone, and diflufenican but were more sensitive to beflubutamid than wild type cells. Norflurazon resistance and beflubutamid sensitivity allow either positive or negative selection against transformants expressing the mutant phytoene desaturase gene. PMID:24936791

  16. Probing the location and function of the conserved histidine residue of phosphoglucose isomerase by using an active site directed inhibitor N-bromoacetylethanolamine phosphate.

    PubMed Central

    Meng, M.; Chane, T. L.; Sun, Y. J.; Hsiao, C. D.

    1999-01-01

    Phosphoglucose isomerase (EC 5.3.1.9) catalyzes the interconversion of D-glucopyranose-6-phosphate and D-fructofuranose-6-phosphate by promoting an intrahydrogen transfer between C1 and C2. A conserved histidine exists throughout all phosphoglucose isomerases and was hypothesized to be the base catalyzing the isomerization reaction. In the present study, this conserved histidine, His311, of the enzyme from Bacillus stearothermophilus was subjected to mutational analysis, and the mutational effect on the inactivation kinetics by N-bromoacetylethanolamine phosphate was investigated. The substitution of His311 with alanine, asparagine, or glutamine resulted in the decrease of activity, in k(cat)/K(M), by a factor of 10(3), indicating the importance of this residue. N-bromoacetylethanolamine phosphate inactivated irreversibly the activity of wild-type phosphoglucose isomerase; however, His311 --> Ala became resistant to this inhibitor, indicating that His311 is located in the active site and is responsible for the inactivation of the enzyme by this active site-directed inhibitor. The pKa of His311 was estimated to be 6.31 according to the pH dependence of the inactivation. The proximity of this value with the pKa value of 6.35, determined from the pH dependence of k(cat)/K(M), supports a role of His311 as a general base in the catalysis. PMID:10595547

  17. The conservation of number and location of 18S sites indicates the relative stability of rDNA in species of Pentatomomorpha (Heteroptera).

    PubMed

    Bardella, Vanessa Bellini; Fernandes, Thiago; Vanzela, André Luís Laforga

    2013-07-01

    Fluorescent in situ hybridization (FISH) with rDNA probes has been used for comparative cytogenetics studies in different groups of organisms. Although heteropterans are a large suborder within Hemiptera, studies using rDNA are limited to the infraorder Cimicomorpha, in which rDNA sites are present in the autosomes or sex chromosomes. We isolated and sequenced a conserved 18S rDNA region of Antiteuchus tripterus (Pentatomidae) and used it as a probe against chromosomes of 25 species belonging to five different families of Pentatomomorpha. The clone pAt05, with a length of 736 bp, exhibited a conserved stretch of 590 bp. FISH analysis with the probe pAt05 always demonstrated hybridization signals in sub-terminal positions, except for Euschistus heros. Apparently, there is a tendency for 18S rDNA sites to locate in autosomes, except for Leptoglossus gonagra and Euryophthalmus rufipennis, which showed signals in the m- and sex chromosomes, respectively. Although FISH has produced evidence that rearrangements are involved in rDNA repositioning, whether in different autosomes or between sex and m-chromosomes, we have no conclusive evidence of what were the pathways of these rearrangements based on the evolutionary history of the species studied here. Nevertheless, the diversity in the number of species analyzed here showed a tendency of 18S rDNA to remain among the autosomes.

  18. Dynamics of lattice kinks

    NASA Astrophysics Data System (ADS)

    Kevrekidis, P. G.; Weinstein, M. I.

    2000-08-01

    We consider a class of Hamiltonian nonlinear wave equations governing a field defined on a spatially discrete one-dimensional lattice, with discreteness parameter, d= h-1, where h>0 is the lattice spacing. The specific cases we consider in detail are the discrete sine-Gordon (SG) and discrete φ4 models. For finite d and in the continuum limit ( d→∞) these equations have static kink-like (heteroclinic) states which are stable. In contrast to the continuum case, due to the breaking of Lorentz invariance, discrete kinks cannot be “Lorentz boosted” to obtain traveling discrete kinks. Peyrard and Kruskal pioneered the study of how a kink, initially propagating in the lattice, dynamically adjusts in the absence of an available family of traveling kinks. We study in detail the final stages of the discrete kink’s evolution during which it is pinned to a specified lattice site (equilibrium position in the Peierls-Nabarro barrier). We find the following: For d sufficiently large (sufficiently small lattice spacing), the state of the system approaches an asymptotically stable ground state static kink (centered between lattice sites). For d sufficiently small, d< d*, the static kink bifurcates to one or more time-periodic states. For the discrete φ4 we have wobbling kinks which have the same spatial symmetry as the static kink as well as “ g-wobblers” and “ e-wobblers”, which have different spatial symmetry. In the discrete SG case, the “ e-wobbler” has the spatial symmetry of the kink, whereas the “ g-wobbler” has the opposite one. These time-periodic states may be regarded as a class of discrete breather/topological defect states; they are spatially localized and time-periodic oscillations mounted on a static kink background. The large time limit of solutions with initial data near a kink is marked by damped oscillation about one of these two types of asymptotic states. In case (1) we compute the characteristics of the damped oscillation

  19. Improving central line infection rates in the neonatal intensive care unit: Effect of hospital location, site of insertion, and implementation of catheter-associated bloodstream infection protocols

    PubMed Central

    Freeman, Jennifer J.; Gadepalli, Samir K.; Siddiqui, Sabina M.; Jarboe, Marcus D.; Hirschl, Ronald B.

    2016-01-01

    Introduction Catheter associated blood stream infections (CABSI) are morbid and expensive for all ages, including neonates. Thus far, the impact of CABSI prevention protocols, such as insertion and maintenance bundles, in the neonatal intensive care unit (NICU) is largely unknown. We hypothesized that lines placed in the operating room (OR) would have a lower infection rate due to established insertion protocols and a more sterile environment. Methods Retrospective chart review of NICU patients who received a percutaneous or tunneled central venous catheter between 2005 and 2012. ECMO cannulas, PICC and umbilical catheters were excluded. Variables of interest included demographics, anatomical site, hospital location, line days, and line infection. Line infection was defined as a positive blood culture drawn through the catheter. Results A total of 368 catheters were placed in 285 NICU patients. Majority of catheters (65.5%) were placed in OR. Saphenous and femoral veins were most common anatomical sites (50.8%). Twenty-eight catheters were infected (7.6%). After adjusting for pre-operative antibiotics, anatomical site, and SNAPPE-II scores, lines placed in OR were three times less likely to become infected (Odds Ratio=0.32, p=0.038). Although implementation of CABSI prevention protocols resulted in statistically significant reductions in infection (Odds Ratio=0.4, p=0.043), lines placed in the OR remained less likely to become infected. Conclusions NICU line infection rates decreased with implementation of CABSI prevention protocols. Despite this implementation, catheters placed in the NICU continued to have higher infection rates. As a result, when patient status allows it, we recommend that central lines in newborns be placed in the operating room. PMID:25783394

  20. Prefrontal rTMS for Treating Depression: Location and Intensity Results from the OPT-TMS Multi-Site Clinical Trial

    PubMed Central

    Johnson, Kevin A.; Baig, Mirza; Ramsey, Dave; Lisanby, Sarah H.; Avery, David; McDonald, William M.; Li, Xingbao; Bernhardt, Elisabeth R.; Haynor, David R.; Holtzheimer, Paul E.; Sackeim, Harold A.; George, Mark S.; Nahas, Ziad

    2012-01-01

    Background Motor cortex localization and motor threshold determination often guide Transcranial Magnetic Stimulation (TMS) placement and intensity settings for non-motor brain stimulation. However, anatomic variability results in variability of placement and effective intensity. Objective Post-study analysis of the OPT-TMS Study reviewed both the final positioning and the effective intensity of stimulation (accounting for relative prefrontal scalp-cortex distances). Methods We acquired MRI scans of 185 patients in a multi-site trial of left prefrontal TMS for depression. Scans had marked motor sites (localized with TMS) and marked prefrontal sites (5 cm anterior of motor cortex by the “5 cm rule”). Based on a visual determination made before the first treatment, TMS therapy occurred either at the 5 cm location or was adjusted 1 cm forward. Stimulation intensity was 120% of resting motor threshold. Results The “5 cm rule” would have placed stimulation in premotor cortex for 9% of patients, which was reduced to 4% with adjustments. We did not find a statistically significant effect of positioning on remission, but no patients with premotor stimulation achieved remission (0/7). Effective stimulation ranged from 93–156% of motor threshold, and no seizures were induced across this range. Patients experienced remission with effective stimulation intensity ranging from 93–146% of motor threshold, and we did not find a significant effect of effective intensity on remission. Conclusions Our data indicates that individualized positioning methods are useful to reduce variability in placement. Stimulation at 120% of motor threshold, unadjusted for scalp-cortex distances, appears safe for a broad range of patients. PMID:22465743

  1. Comparison of 3D quantitative structure-activity relationship methods: Analysis of the in vitro antimalarial activity of 154 artemisinin analogues by hypothetical active-site lattice and comparative molecular field analysis

    NASA Astrophysics Data System (ADS)

    Woolfrey, John R.; Avery, Mitchell A.; Doweyko, Arthur M.

    1998-03-01

    Two three-dimensional quantitative structure-activity relationship (3D-QSAR) methods, comparative molecular field analysis (CoMFA) and hypothetical active site lattice (HASL), were compared with respect to the analysis of a training set of 154 artemisinin analogues. Five models were created, including a complete HASL and two trimmed versions, as well as two CoMFA models (leave-one-out standard CoMFA and the guided-region selection protocol). Similar r2 and q2 values were obtained by each method, although some striking differences existed between CoMFA contour maps and the HASL output. Each of the four predictive models exhibited a similar ability to predict the activity of a test set of 23 artemisinin analogues, although some differences were noted as to which compounds were described well by either model.

  2. A geographic analysis of Roman (64 B.C.E.--324 C.E.) and Umayyad (640--750 C.E.) period site locations on the Karak Plateau, Jordan

    NASA Astrophysics Data System (ADS)

    Green, Mark Dana

    Site locations that provided essential geophysical resources including natural water sources, rock outcrops, arable land and a topographical regime that facilitated site drainage and water harvesting along with a strategic view of the surrounding area were available in limited number and widely distributed on the Karak Plateau, Jordan. As a result of competition for sites with access to these important resources, ancient site to resource spatial relationships are expected to have changed with changes in site density. Surveys conducted on the Karak Plateau, Jordan have reported a five-fold decrease in the number of sites during the Umayyad phase of the Early Islamic period (640--750 C.E.) when compared to the number of sites during the earlier Roman period (64 B.C.E.--324 C.E.). This project used the change in site density between the two periods to analyze the impact that site density had on the spatial relationships between sites and resources. Logistical challenges along with the cost to collect the information required to produce a regional-scale resource map through traditional field surveys are prohibitive. To overcome this obstacle, this project identified and mapped the critical geologic resources using satellite data (Remote Sensing). A Geographic Information System (GIS) was used to integrate the site, geologic and other resource data. The data was used to measure the statistical significance of the site to resource relationships and the significance of the differences in those relationships as site density changed. Sites from both periods demonstrated a preference for the same slope and aspect environment. The relationships between sites and rock outcrops, ridge locations and agriculturally suitable soils were statistically significant in both periods. During the less densely populated Umayyad period, site location decisions were dominated by the nearest rock outcrop relationship.

  3. Random sequential adsorption on imprecise lattice

    NASA Astrophysics Data System (ADS)

    Privman, Vladimir; Yan, Han

    2016-06-01

    We report a surprising result, established by numerical simulations and analytical arguments for a one-dimensional lattice model of random sequential adsorption, that even an arbitrarily small imprecision in the lattice-site localization changes the convergence to jamming from fast, exponential, to slow, power-law, with, for some parameter values, a discontinuous jump in the jamming coverage value. This finding has implications for irreversible deposition on patterned substrates with pre-made landing sites for particle attachment. We also consider a general problem of the particle (depositing object) size not an exact multiple of the lattice spacing, and the lattice sites themselves imprecise, broadened into allowed-deposition intervals. Regions of exponential vs. power-law convergence to jamming are identified, and certain conclusions regarding the jamming coverage are argued for analytically and confirmed numerically.

  4. Subwavelength Lattice Optics by Evolutionary Design

    PubMed Central

    2015-01-01

    This paper describes a new class of structured optical materials—lattice opto-materials—that can manipulate the flow of visible light into a wide range of three-dimensional profiles using evolutionary design principles. Lattice opto-materials are based on the discretization of a surface into a two-dimensional (2D) subwavelength lattice whose individual lattice sites can be controlled to achieve a programmed optical response. To access a desired optical property, we designed a lattice evolutionary algorithm that includes and optimizes contributions from every element in the lattice. Lattice opto-materials can exhibit simple properties, such as on- and off-axis focusing, and can also concentrate light into multiple, discrete spots. We expanded the unit cell shapes of the lattice to achieve distinct, polarization-dependent optical responses from the same 2D patterned substrate. Finally, these lattice opto-materials can also be combined into architectures that resemble a new type of compound flat lens. PMID:25380062

  5. Influence of season and site location on European cultured sea bass parasites in Corsican fish farms using indicator species analysis (IndVal).

    PubMed

    Antonelli, Laetitia; Foata, Joséphine; Quilichini, Yann; Marchand, Bernard

    2016-02-01

    The parasites of 536 European sea bass, Dicentrarchus labrax, were studied between January 2012 and December 2013 in six Corsican fish farms. The indicator value (IndVal) method, which combines measures of fidelity and specificity, has been used in this study. Because of its resilience to changes in abundance, IndVal is a particularly effective tool for ecological bioindicator. The IndVal method showed how season can influence the occurrence of parasite species in cultured sea bass and also identified parasites as bioindicators relative to fish farm location. The combination of specificity and fidelity highlighted several parasite species as significant indicators. A randomization test identified five parasite species as having a significant indicator value for season (the monogenean Diplectanum aequans; the copepods Lernanthropus kroyeri and Caligus minimus; the isopod Ceratothoa oestroides, and the myxosporidian Ceratomyxa labracis). If gills parasites are compared, they can be seen to be indicator species for two different seasons. The only Monogenea species D. aequans had fidelity and specificity more pronounced in winter, whereas both copepod species and the Isopoda revealed highest rates of infestation corresponding with an increase of water temperature. Four species have a significant indicator value for site location (D. aequans, L. kroyeri, C. minimus, and C. oestroides). The fact that the farm 6 was isolated on the east coast of Corsica may not have allowed the parasite to infect other farms. The presence of copepods on a single farm can also be explained according to salinity variations. Data for species composition and infection levels should help to improve the monitoring and management of parasitism in cultured sea bass populations.

  6. LATTICE QCD AT FINITE DENSITY.

    SciTech Connect

    SCHMIDT, C.

    2006-07-23

    I discuss different approaches to finite density lattice QCD. In particular, I focus on the structure of the phase diagram and discuss attempts to determine the location of the critical end-point. Recent results on the transition line as function of the chemical potential (T{sub c}({mu}{sub q})) are reviewed. Along the transition line, hadronic fluctuations have been calculated; which can be used to characterize properties of the Quark Gluon plasma and eventually can also help to identify the location of the critical end-point in the QCD phase diagram on the lattice and in heavy ion experiments. Furthermore, I comment on the structure of the phase diagram at large {mu}{sub q}.

  7. Site- and bond-percolation thresholds in Kn ,n-based lattices: Vulnerability of quantum annealers to random qubit and coupler failures on chimera topologies

    NASA Astrophysics Data System (ADS)

    Melchert, O.; Katzgraber, Helmut G.; Novotny, M. A.

    2016-04-01

    We estimate the critical thresholds of bond and site percolation on nonplanar, effectively two-dimensional graphs with chimeralike topology. The building blocks of these graphs are complete and symmetric bipartite subgraphs of size 2 n , referred to as Kn ,n graphs. For the numerical simulations we use an efficient union-find-based algorithm and employ a finite-size scaling analysis to obtain the critical properties for both bond and site percolation. We report the respective percolation thresholds for different sizes of the bipartite subgraph and verify that the associated universality class is that of standard two-dimensional percolation. For the canonical chimera graph used in the D-Wave Systems Inc. quantum annealer (n =4 ), we discuss device failure in terms of network vulnerability, i.e., we determine the critical fraction of qubits and couplers that can be absent due to random failures prior to losing large-scale connectivity throughout the device.

  8. Site- and bond-percolation thresholds in K_{n,n}-based lattices: Vulnerability of quantum annealers to random qubit and coupler failures on chimera topologies.

    PubMed

    Melchert, O; Katzgraber, Helmut G; Novotny, M A

    2016-04-01

    We estimate the critical thresholds of bond and site percolation on nonplanar, effectively two-dimensional graphs with chimeralike topology. The building blocks of these graphs are complete and symmetric bipartite subgraphs of size 2n, referred to as K_{n,n} graphs. For the numerical simulations we use an efficient union-find-based algorithm and employ a finite-size scaling analysis to obtain the critical properties for both bond and site percolation. We report the respective percolation thresholds for different sizes of the bipartite subgraph and verify that the associated universality class is that of standard two-dimensional percolation. For the canonical chimera graph used in the D-Wave Systems Inc. quantum annealer (n=4), we discuss device failure in terms of network vulnerability, i.e., we determine the critical fraction of qubits and couplers that can be absent due to random failures prior to losing large-scale connectivity throughout the device.

  9. Spin-Lattice-Coupled Order in Heisenberg Antiferromagnets on the Pyrochlore Lattice

    NASA Astrophysics Data System (ADS)

    Aoyama, Kazushi; Kawamura, Hikaru

    2016-06-01

    Effects of local lattice distortions on the spin ordering are investigated for the antiferromagnetic classical Heisenberg model on the pyrochlore lattice. It is found by Monte Carlo simulations that the spin-lattice coupling (SLC) originating from site phonons induces a first-order transition into two different types of collinear magnetic ordered states. The state realized at the stronger SLC is cubic symmetric characterized by the magnetic (1/2 ,1/2 ,1/2 ) Bragg peaks, while that at the weaker SLC is tetragonal symmetric characterized by the (1,1,0) ones, each accompanied by the commensurate local lattice distortions. Experimental implications to chromium spinels are discussed.

  10. Spin-Lattice-Coupled Order in Heisenberg Antiferromagnets on the Pyrochlore Lattice.

    PubMed

    Aoyama, Kazushi; Kawamura, Hikaru

    2016-06-24

    Effects of local lattice distortions on the spin ordering are investigated for the antiferromagnetic classical Heisenberg model on the pyrochlore lattice. It is found by Monte Carlo simulations that the spin-lattice coupling (SLC) originating from site phonons induces a first-order transition into two different types of collinear magnetic ordered states. The state realized at the stronger SLC is cubic symmetric characterized by the magnetic (1/2,1/2,1/2) Bragg peaks, while that at the weaker SLC is tetragonal symmetric characterized by the (1,1,0) ones, each accompanied by the commensurate local lattice distortions. Experimental implications to chromium spinels are discussed.

  11. Discrete breathers in hexagonal dusty plasma lattices

    SciTech Connect

    Koukouloyannis, V.; Kourakis, I.

    2009-08-15

    The occurrence of single-site or multisite localized vibrational modes, also called discrete breathers, in two-dimensional hexagonal dusty plasma lattices is investigated. The system is described by a Klein-Gordon hexagonal lattice characterized by a negative coupling parameter epsilon in account of its inverse dispersive behavior. A theoretical analysis is performed in order to establish the possibility of existence of single as well as three-site discrete breathers in such systems. The study is complemented by a numerical investigation based on experimentally provided potential forms. This investigation shows that a dusty plasma lattice can support single-site discrete breathers, while three-site in phase breathers could exist if specific conditions, about the intergrain interaction strength, would hold. On the other hand, out of phase and vortex three-site breathers cannot be supported since they are highly unstable.

  12. Structural acceptance criteria for the evaulation of existing double-shell waste storage tanks located at the Hanford site, Richland, Washington

    SciTech Connect

    Julyk, L.J.; Day, A.D.; Dyrness, A.D.; Moore, C.J.; Peterson, W.S.; Scott, M.A.; Shrivastava, H.P.; Sholman, J.S.; Watts, T.N.

    1995-09-01

    The structural acceptance criteria contained herein for the evaluation of existing underground double-shell waste storage tanks located at the Hanford Site is part of the Life Management/Aging Management Program of the Tank Waste Remediation System. The purpose of the overall life management program is to ensure that confinement of the waste is maintained over the required service life of the tanks. Characterization of the present condition of the tanks, understanding and characterization of potential degradation mechanisms, and development of tank structural acceptance criteria based on previous service and projected use are prerequisites to assessing tank integrity, to projecting the length of tank service, and to developing and applying prudent fixes or repairs. The criteria provided herein summarize the requirements for the analysis and structural qualification of the existing double-shell tanks for continued operation. Code reconciliation issues and material degradation under aging conditions are addressed. Although the criteria were developed for double-shell tanks, many of the provisions are equally applicable to single-shell tanks. However, the criteria do not apply to the evaluation of tank appurtenances and buried piping.

  13. Ecological conditions of ponds situated on blast furnace slag deposits located in South Gare Site of Special Scientific Interest (SSSI), Teesside, UK.

    PubMed

    Raper, E; Davies, S; Perkins, B; Lamb, H; Hermanson, M; Soares, A; Stephenson, T

    2015-06-01

    Slag, a by-product from the iron and steel industry, has a range of applications within construction and is used in wastewater treatment. Historically considered a waste material, little consideration was given to the environmental impacts of its disposal. South Gare (a Site of Special Scientific Interest) located at the mouth of the Tees estuary, UK, formed on slag deposits used to create a sea wall and make the land behind permanent. Over time, ponds formed in depressions with the water chemistry, being significantly impacted by the slag deposits. Calcium levels reached 504 mg/L, nitrate 49.0 mg/L and sulphate 1,698 mg/L. These levels were also reflected in the composition of the sediment. pH (5.10-9.90) and electrical conductivity (2,710-3,598 µS/cm) were variable but often notably high. Pb, Cu and Cd were not present within the water, whilst Zn ranged from 0.027 to 0.37 mg/L. Heavy metal levels were higher in surface sediments. Zinc was most dominant (174.3-1,310.2 mg/L) followed by Pb (9.9-431 mg/L), Cu (8.4-41.8 mg/L) and Cd (0.4-1.1 mg/L). A sediment core provided a historical overview of the ponds. The ponds were unfavourable for aquatic biodiversity and unsuitable for drinking water abstraction.

  14. Spin Chains with Dynamical Lattice Supersymmetry

    NASA Astrophysics Data System (ADS)

    Hagendorf, Christian

    2013-02-01

    Spin chains with exact supersymmetry on finite one-dimensional lattices are considered. The supercharges are nilpotent operators on the lattice of dynamical nature: they change the number of sites. A local criterion for the nilpotency on periodic lattices is formulated. Any of its solutions leads to a supersymmetric spin chain. It is shown that a class of special solutions at arbitrary spin gives the lattice equivalents of the {N}=(2,2) superconformal minimal models. The case of spin one is investigated in detail: in particular, it is shown that the Fateev-Zamolodchikov chain and its off-critical extension possess a lattice supersymmetry for all its coupling constants. Its supersymmetry singlets are thoroughly analysed, and a relation between their components and the weighted enumeration of alternating sign matrices is conjectured.

  15. Exotic damping ring lattices

    SciTech Connect

    Palmer, R.B.

    1987-05-01

    This paper looks at, and compares three types of damping ring lattices: conventional, wiggler lattice with finite ..cap alpha.., wiggler lattice with ..cap alpha.. = 0, and observes the attainable equilibrium emittances for the three cases assuming a constraint on the attainable longitudinal impedance of 0.2 ohms. The emittance obtained are roughly in the ratio 4:2:1 for these cases.

  16. Duality analysis on random planar lattices.

    PubMed

    Ohzeki, Masayuki; Fujii, Keisuke

    2012-11-01

    The conventional duality analysis is employed to identify a location of a critical point on a uniform lattice without any disorder in its structure. In the present study, we deal with the random planar lattice, which consists of the randomized structure based on the square lattice. We introduce the uniformly random modification by the bond dilution and contraction on a part of the unit square. The random planar lattice includes the triangular and hexagonal lattices in extreme cases of a parameter to control the structure. A modern duality analysis fashion with real-space renormalization is found to be available for estimating the location of the critical points with a wide range of the randomness parameter. As a simple test bed, we demonstrate that our method indeed gives several critical points for the cases of the Ising and Potts models and the bond-percolation thresholds on the random planar lattice. Our method leads to not only such an extension of the duality analyses on the classical statistical mechanics but also a fascinating result associated with optimal error thresholds for a class of quantum error correction code, the surface code on the random planar lattice, which is known as a skillful technique to protect the quantum state.

  17. KENNEDY SPACE CENTER, FLA. - Louis MacDowell (right), Testbed manager, explains to Center Director Jim Kennedy the use of astmospheric calibration specimens. Placed at various locations, they can rank the corrosivity of the given environment. The KSC Beach Corrosion Test Site was established in the 1960s and has provided more than 30 years of historical information on the long-term performance of many materials in use at KSC and other locations around the world. Located 100 feet from the Atlantic Ocean approximately 1 mile south of the Space Shuttle launch sites, the test facility includes an atmospheric exposure site, a flowing seawater exposure site, and an on-site electrochemistry laboratory and monitoring station. The beach laboratory is used to conduct real-time corrosion experiments and provides for the remote monitoring of surrounding weather conditions. The newly added flowing seawater immersion facility provides for the immersion testing of materials and devices under controlled conditions.

    NASA Image and Video Library

    2003-08-21

    KENNEDY SPACE CENTER, FLA. - Louis MacDowell (right), Testbed manager, explains to Center Director Jim Kennedy the use of astmospheric calibration specimens. Placed at various locations, they can rank the corrosivity of the given environment. The KSC Beach Corrosion Test Site was established in the 1960s and has provided more than 30 years of historical information on the long-term performance of many materials in use at KSC and other locations around the world. Located 100 feet from the Atlantic Ocean approximately 1 mile south of the Space Shuttle launch sites, the test facility includes an atmospheric exposure site, a flowing seawater exposure site, and an on-site electrochemistry laboratory and monitoring station. The beach laboratory is used to conduct real-time corrosion experiments and provides for the remote monitoring of surrounding weather conditions. The newly added flowing seawater immersion facility provides for the immersion testing of materials and devices under controlled conditions.

  18. rs2735383, located at a microRNA binding site in the 3’UTR of NBS1, is not associated with breast cancer risk

    PubMed Central

    Liu, Jingjing; Lončar, Ivona; Collée, J. Margriet; Bolla, Manjeet K.; Dennis, Joe; Michailidou, Kyriaki; Wang, Qin; Andrulis, Irene L.; Barile, Monica; Beckmann, Matthias W.; Behrens, Sabine; Benitez, Javier; Blomqvist, Carl; Boeckx, Bram; Bogdanova, Natalia V.; Bojesen, Stig E.; Brauch, Hiltrud; Brennan, Paul; Brenner, Hermann; Broeks, Annegien; Burwinkel, Barbara; Chang-Claude, Jenny; Chen, Shou-Tung; Chenevix-Trench, Georgia; Cheng, Ching Y.; Choi, Ji-Yeob; Couch, Fergus J.; Cox, Angela; Cross, Simon S.; Cuk, Katarina; Czene, Kamila; Dörk, Thilo; dos-Santos-Silva, Isabel; Fasching, Peter A.; Figueroa, Jonine; Flyger, Henrik; García-Closas, Montserrat; Giles, Graham G.; Glendon, Gord; Goldberg, Mark S.; González-Neira, Anna; Guénel, Pascal; Haiman, Christopher A.; Hamann, Ute; Hart, Steven N.; Hartman, Mikael; Hatse, Sigrid; Hopper, John L.; Ito, Hidemi; Jakubowska, Anna; Kabisch, Maria; Kang, Daehee; Kosma, Veli-Matti; Kristensen, Vessela N.; Le Marchand, Loic; Lee, Eunjung; Li, Jingmei; Lophatananon, Artitaya; Jan Lubinski; Mannermaa, Arto; Matsuo, Keitaro; Milne, Roger L.; Sahlberg, Kristine K.; Ottestad, Lars; Kåresen, Rolf; Langerød, Anita; Schlichting, Ellen; Holmen, Marit Muri; Sauer, Toril; Haakensen, Vilde; Engebråten, Olav; Naume, Bjørn; Kiserud, Cecile E.; Reinertsen, Kristin V.; Helland, åslaug; Riis, Margit; Bukholm, Ida; Lønning, Per Eystein; Børresen-Dale, Anne-Lise; Grenaker Alnæs, Grethe I.; Neuhausen, Susan L.; Nevanlinna, Heli; Orr, Nick; Perez, Jose I. A.; Peto, Julian; Putti, Thomas C.; Pylkäs, Katri; Radice, Paolo; Sangrajrang, Suleeporn; Sawyer, Elinor J.; Schmidt, Marjanka K.; Schneeweiss, Andreas; Shen, Chen-Yang; Shrubsole, Martha J.; Shu, Xiao-Ou; Simard, Jacques; Southey, Melissa C.; Swerdlow, Anthony; Teo, Soo H.; Tessier, Daniel C.; Thanasitthichai, Somchai; Tomlinson, Ian; Torres, Diana; Truong, Thérèse; Tseng, Chiu-Chen; Vachon, Celine; Winqvist, Robert; Wu, Anna H.; Yannoukakos, Drakoulis; Zheng, Wei; Hall, Per; Dunning, Alison M.; Easton, Douglas F.; Hooning, Maartje J.; van den Ouweland, Ans M. W.; Martens, John W. M.; Hollestelle, Antoinette

    2016-01-01

    NBS1, also known as NBN, plays an important role in maintaining genomic stability. Interestingly, rs2735383 G > C, located in a microRNA binding site in the 3′-untranslated region (UTR) of NBS1, was shown to be associated with increased susceptibility to lung and colorectal cancer. However, the relation between rs2735383 and susceptibility to breast cancer is not yet clear. Therefore, we genotyped rs2735383 in 1,170 familial non-BRCA1/2 breast cancer cases and 1,077 controls using PCR-based restriction fragment length polymorphism (RFLP-PCR) analysis, but found no association between rs2735383CC and breast cancer risk (OR = 1.214, 95% CI = 0.936–1.574, P = 0.144). Because we could not exclude a small effect size due to a limited sample size, we further analyzed imputed rs2735383 genotypes (r2 > 0.999) of 47,640 breast cancer cases and 46,656 controls from the Breast Cancer Association Consortium (BCAC). However, rs2735383CC was not associated with overall breast cancer risk in European (OR = 1.014, 95% CI = 0.969–1.060, P = 0.556) nor in Asian women (OR = 0.998, 95% CI = 0.905–1.100, P = 0.961). Subgroup analyses by age, age at menarche, age at menopause, menopausal status, number of pregnancies, breast feeding, family history and receptor status also did not reveal a significant association. This study therefore does not support the involvement of the genotype at NBS1 rs2735383 in breast cancer susceptibility. PMID:27845421

  19. Investigating Remediation Reagents Injection and Rainfall Effect by using Self-Potential Method in a Soil and Groundwater Contamination Site located in Yung Kang, Taiwan

    NASA Astrophysics Data System (ADS)

    Chuang, Yung-Chieh; Chen, Chien-Chih; Wang, Tzu-Pin; Dong, Tien-Hsing; Chen, Yao-Tsung; Lin, Su-Tien; Ho, Ching-Jen

    2016-04-01

    In this study, we have proposed the use of time-lapse SP (self-potential) monitoring system to investigate a remediation reagents injection and rainfall effect in the soil and groundwater contamination site which was located in Yung Kang, Taiwan. We set up two mutually perpendicular survey lines to continuously record the SP data at a sampling rate of 25 Hz. One extended in N-S direction for a total length of 85 m with 17 potential electrodes and 1 common reference electrode. Another extended in E-W direction for a total length of 35 m with 7 potential electrodes and 1 common reference electrode. By averaging 1 day hourly SP median data, we calculated the time-lapse SPT (self-potential tomography) with a published code SP2DINV, and got the following results. First and foremost, from the daily SPTs, we found some artificial structures at a depth of circa 5 m. Then, by observing the positive and negative electric potential distributions in both N-S and E-W SPTs, we determined that the regional groundwater flow direction was in NE. Besides, making use of interpolation scheme, we filtered the rainfall effect out of the raw SP data. Then from the SPTs within the rainy days, we successfully demonstrated the SP response to the precipitation. And this phenomenon was interpreted as streaming potential which was caused from the enhancement of groundwater pressure. In addition, we correlated the charge density variation above 5m from SPTs with daily rainfall from August to September, to evaluate the Streaming Potential Coupling Coefficient. Last but not the least, by analyzing the SPTs variation from 13th to 18th October 2015 and from 23th to 25th November 2015, we compared the SPTs difference between two remediation reagents injection periods. And we also computed the passing time of the equal-potential lines between two fixed points, to evaluate the apparent hydraulic conductivities in this study area.

  20. Exon 10 skipping in ACAT1 caused by a novel c.949G>A mutation located at an exonic splice enhancer site.

    PubMed

    Otsuka, Hiroki; Sasai, Hideo; Nakama, Mina; Aoyama, Yuka; Abdelkreem, Elsayed; Ohnishi, Hidenori; Konstantopoulou, Vassiliki; Sass, Jörn Oliver; Fukao, Toshiyuki

    2016-11-01

    Beta-ketothiolase deficiency, also known as mitochondrial acetoacetyl-CoA thiolase (T2) deficiency, is an autosomal recessive disease caused by mutations in the acetyl‑CoA acetyltransferase 1 (ACAT1) gene. A German T2‑deficient patient that developed a severe ketoacidotic episode at the age of 11 months, was revealed to be a compound heterozygote of a previously reported null mutation, c.472A>G (p.N158D) and a novel mutation, c.949G>A (p.D317N), in ACAT1. The c.949G>A mutation was suspected to cause aberrant splicing as it is located within an exonic splicing enhancer sequence (c. 947CTGACGC) that is a potential binding site for serine/arginine‑rich splicing factor 1. A mutation in this sequence, c.951C>T, results in exon 10 skipping. A minigene construct was synthesized that included exon 9‑truncated intron 9‑exon 10‑truncated intron 10‑exon 11, and the splicing of this minigene revealed that the c.949G>A mutant construct caused exon 10 skipping in a proportion of the transcripts. Furthermore, additional substitution of G for C at the first nucleotide of exon 10 (c.941G>C) abolished the effect of the c.949G>A mutation. Transient expression analysis of the c.949G>A mutant cDNA revealed no residual T2 activity in the mutated D317N enzyme. Therefore, c.949G>A (D317N) is a pathogenic missense mutation, and diminishes the effect of an exonic splicing enhancer and causes exon 10 skipping. The present study demonstrates that a missense mutation, or even a synonymous substitution, may disrupt enzyme function by interference with splicing.

  1. Comparison of CAP88 PC Ver. 3.0 and MAXDOSE dose assessment models involving co-located stack releases at the Savannah River site.

    PubMed

    Farfán, Eduardo; Jannik, G Timothy; Lee, Patricia; Powell, Aaron

    2013-08-01

    The Savannah River National Laboratory's Environmental Dosimetry Group performs dosimetry assessments for Savannah River Site (SRS) radionuclide air emissions utilizing the Clean Air Act Assessment Package-1988 (CAP88) code (CAP88 PC Ver. 3.0) and the MAXDOSE-SR Ver. 2011 code, which is an SRS-specific version of the Nuclear Regulatory Commission's MAXIGASP code. CAP88 PC and MAXDOSE-SR are used at SRS for demonstrating compliance with Environmental Protection Agency dose standards for radionuclide emissions to the atmosphere and Department of Energy Order 458.1 dose standards, respectively. During a routine comparison of these two assessment models, it was discovered that CAP88 PC Ver. 3.0 was not producing the expected results when using multiple co-located stacks in a single run. Specifically, if the stack heights are considered separately, the results for several radionuclides (but not all) differ from the combined run [i.e., 1 + 2 does not equal (1+2)]. Additionally, when two or more stack heights are considered in a run, the results depend on the order of the selected stack heights. For example, for a two stack-height run of 0 meter and 61 m input produces different results from a 61 m and 0 m input run. This study presents a comparison of CAP88 PC Ver. 3.0 and MAXDOSE-SR Ver. 2011 based on SRS input data and on two-stack release scenarios. The selected radionuclides for this study included gases/vapors (H, C, Kr, and I) and particulates (Sr, Cs, Pu, and Am) commonly encountered at SRS.

  2. Is the Site of Back Pain Related to the Location of Magnetic Resonance Imaging Lesions in Patients With Chronic Back Pain? Results From the Spondyloarthritis Caught Early Cohort.

    PubMed

    de Hooge, Manouk; de Bruin, Freek; de Beer, Lieke; Bakker, Pauline; van den Berg, Rosaline; Ramiro, Sofia; van Gaalen, Floris; Fagerli, Karen; Landewé, Robert; van Oosterhout, Maikel; Ramonda, Roberta; Huizinga, Tom; Bloem, Hans; Reijnierse, Monique; van der Heijde, Désirée

    2017-05-01

    To determine associations between magnetic resonance imaging (MRI) lesions originating from either axial spondyloarthritis (SpA) or from degeneration and pain in patients with chronic back pain of <2 years duration. Patients from the Spondyloarthritis Caught Early (SPACE) cohort identified the sites of pain (thoracic, lumbar, buttock). The average MRI scores from 2 readers for axial SpA lesions and from 2 different readers for degenerative lesions were used. Associations between sacroiliac (SI) joint lesions and buttock pain were investigated by logistic regression analysis, and associations between axial SpA or degenerative lesions and pain in the spine (thoracic and lumbar) were investigated using generalized estimating equations. Interactions with sex, age, HLA-B27, and fulfillment of Assessment of SpondyloArthritis international Society (ASAS) criteria were tested. In 348 patients (126 males, 127 fulfilling ASAS criteria, mean age 29.4 years), spinal MRI (and SI joint images in 342) were available. Pain was localized in the thoracic spine (35.9%), the lumbar spine (82.5%), or in the buttock(s) (57.8%). Inflammatory lesions of the SI joint (odds ratio [OR] 1.06; P = 0.04) and erosions of the SI joint in patients <25 years (OR 1.16; P = 0.04) were associated with buttock pain. Axial SpA spinal lesions were not associated with pain. Modic type 1 lesions in patients >35 years (OR 5.19; P = 0.001), high-intensity zone lesions in females not fulfilling ASAS criteria (OR 5.09; P = 0.001), and herniation in various subgroups (OR range 2.07-4.66) were associated with pain. Specific degenerative lesions, but not typical axial SpA lesions, of the spine are associated with pain at the same location in some subgroups. Inflammatory lesions in the SI joint are associated with buttock pain. © 2016, American College of Rheumatology.

  3. rs2735383, located at a microRNA binding site in the 3'UTR of NBS1, is not associated with breast cancer risk.

    PubMed

    Liu, Jingjing; Lončar, Ivona; Collée, J Margriet; Bolla, Manjeet K; Dennis, Joe; Michailidou, Kyriaki; Wang, Qin; Andrulis, Irene L; Barile, Monica; Beckmann, Matthias W; Behrens, Sabine; Benitez, Javier; Blomqvist, Carl; Boeckx, Bram; Bogdanova, Natalia V; Bojesen, Stig E; Brauch, Hiltrud; Brennan, Paul; Brenner, Hermann; Broeks, Annegien; Burwinkel, Barbara; Chang-Claude, Jenny; Chen, Shou-Tung; Chenevix-Trench, Georgia; Cheng, Ching Y; Choi, Ji-Yeob; Couch, Fergus J; Cox, Angela; Cross, Simon S; Cuk, Katarina; Czene, Kamila; Dörk, Thilo; Dos-Santos-Silva, Isabel; Fasching, Peter A; Figueroa, Jonine; Flyger, Henrik; García-Closas, Montserrat; Giles, Graham G; Glendon, Gord; Goldberg, Mark S; González-Neira, Anna; Guénel, Pascal; Haiman, Christopher A; Hamann, Ute; Hart, Steven N; Hartman, Mikael; Hatse, Sigrid; Hopper, John L; Ito, Hidemi; Jakubowska, Anna; Kabisch, Maria; Kang, Daehee; Kosma, Veli-Matti; Kristensen, Vessela N; Le Marchand, Loic; Lee, Eunjung; Li, Jingmei; Lophatananon, Artitaya; Jan Lubinski; Mannermaa, Arto; Matsuo, Keitaro; Milne, Roger L; Neuhausen, Susan L; Nevanlinna, Heli; Orr, Nick; Perez, Jose I A; Peto, Julian; Putti, Thomas C; Pylkäs, Katri; Radice, Paolo; Sangrajrang, Suleeporn; Sawyer, Elinor J; Schmidt, Marjanka K; Schneeweiss, Andreas; Shen, Chen-Yang; Shrubsole, Martha J; Shu, Xiao-Ou; Simard, Jacques; Southey, Melissa C; Swerdlow, Anthony; Teo, Soo H; Tessier, Daniel C; Thanasitthichai, Somchai; Tomlinson, Ian; Torres, Diana; Truong, Thérèse; Tseng, Chiu-Chen; Vachon, Celine; Winqvist, Robert; Wu, Anna H; Yannoukakos, Drakoulis; Zheng, Wei; Hall, Per; Dunning, Alison M; Easton, Douglas F; Hooning, Maartje J; van den Ouweland, Ans M W; Martens, John W M; Hollestelle, Antoinette

    2016-11-15

    NBS1, also known as NBN, plays an important role in maintaining genomic stability. Interestingly, rs2735383 G > C, located in a microRNA binding site in the 3'-untranslated region (UTR) of NBS1, was shown to be associated with increased susceptibility to lung and colorectal cancer. However, the relation between rs2735383 and susceptibility to breast cancer is not yet clear. Therefore, we genotyped rs2735383 in 1,170 familial non-BRCA1/2 breast cancer cases and 1,077 controls using PCR-based restriction fragment length polymorphism (RFLP-PCR) analysis, but found no association between rs2735383CC and breast cancer risk (OR = 1.214, 95% CI = 0.936-1.574, P = 0.144). Because we could not exclude a small effect size due to a limited sample size, we further analyzed imputed rs2735383 genotypes (r(2) > 0.999) of 47,640 breast cancer cases and 46,656 controls from the Breast Cancer Association Consortium (BCAC). However, rs2735383CC was not associated with overall breast cancer risk in European (OR = 1.014, 95% CI = 0.969-1.060, P = 0.556) nor in Asian women (OR = 0.998, 95% CI = 0.905-1.100, P = 0.961). Subgroup analyses by age, age at menarche, age at menopause, menopausal status, number of pregnancies, breast feeding, family history and receptor status also did not reveal a significant association. This study therefore does not support the involvement of the genotype at NBS1 rs2735383 in breast cancer susceptibility.

  4. Lattice invariants for knots

    SciTech Connect

    Janse Van Rensburg, E.J.

    1996-12-31

    The geometry of polygonal knots in the cubic lattice may be used to define some knot invariants. One such invariant is the minimal edge number, which is the minimum number of edges necessary (and sufficient) to construct a lattice knot of given type. In addition, one may also define the minimal (unfolded) surface number, and the minimal (unfolded) boundary number; these are the minimum number of 2-cells necessary to construct an unfolded lattice Seifert surface of a given knot type in the lattice, and the minimum number of edges necessary in a lattice knot to guarantee the existence of an unfolded lattice Seifert surface. In addition, I derive some relations amongst these invariants. 8 refs., 5 figs., 2 tabs.

  5. Location Privacy

    NASA Astrophysics Data System (ADS)

    Meng, Xiaofeng; Chen, Jidong

    With rapid development of sensor and wireless mobile devices, it is easy to access mobile users' location information anytime and anywhere. On one hand, LBS is becoming more and more valuable and important. On the other hand, location privacy issues raised by such applications have also gained more attention. However, due to the specificity of location information, traditional privacy-preserving techniques in data publishing cannot be used. In this chapter, we will introduce location privacy, and analyze the challenges of location privacy-preserving, and give a survey of existing work including the system architecture, location anonymity and query processing.

  6. The EMMA Lattice

    NASA Astrophysics Data System (ADS)

    Berg, J. Scott

    2008-02-01

    EMMA is a 10 to 20 MeV electron ring designed to test our understanding of beam dynamics in a relativistic linear non-scaling fixed field alternating gradient accelerator (FFAG). I will give a basic review of the EMMA lattice parameters. Then I will review the different lattice configurations that we would like to have for EMMA. Finally, I will briefly discuss the process of commissioning each lattice configuration.

  7. Ising antiferromagnet on the 2-uniform lattices

    NASA Astrophysics Data System (ADS)

    Yu, Unjong

    2016-08-01

    The antiferromagnetic Ising model is investigated on the twenty 2-uniform lattices using the Monte Carlo method based on the Wang-Landau algorithm and the Metropolis algorithm to study the geometric frustration effect systematically. Based on the specific heat, the residual entropy, and the Edwards-Anderson freezing order parameter, the ground states of them were determined. In addition to the long-range-ordered phase and the spin ice phase found in the Archimedean lattices, two more phases were found. The partial long-range order is long-range order with exceptional disordered sites, which give extensive residual entropy. In the partial spin ice phase, the partial freezing phenomenon appears: A majority of sites are frozen without long-range order, but the other sites are fluctuating even at zero temperature. The spin liquid ground state was not found in the 2-uniform lattices.

  8. Location | FNLCR

    Cancer.gov

    The Frederick National Laboratory for Cancer Research campus is located 50 miles northwest of Washington, D.C., and 50 miles west of Baltimore, Maryland, in Frederick, Maryland. Satellite locations include leased and government facilities extending s

  9. The effect of a spinal cord hemisection on changes in nitric oxide synthase pools in the site of injury and in regions located far away from the injured site.

    PubMed

    Lukácová, Nadezda; Kolesárová, Mária; Kuchárová, Karolína; Pavel, Jaroslav; Kolesár, Dalibor; Radonák, Jozef; Marsala, Martin; Chalimoniuk, Malgorzata; Langfort, Jozef; Marsala, Jozef

    2006-01-01

    1. The present study was designed to examine the nitric oxide synthase activities (constitutive and inducible) in the site of injury in response to Th10-Th11 spinal cord hemisection and, to determine whether unilateral disconnection of the spinal cord influences the NOS pools on the contra- and ipsilateral sides in segments located far away from the epicentre of injury. 2. A radioassay detection was used to determine Ca(2+)-dependent and inducible nitric oxide synthase activities. Somal, axonal and neuropil neuronal nitric oxide synthase was assessed by immunocytochemical study. A quantitative assessment of neuronal nitric oxide synthase immunoreactivity was made by an image analyser. The level of neuronal nitric oxide synthase protein was measured by the Western blot analysis. 3. Our data show the increase of inducible nitric oxide synthase activity and a decrease of Ca(2+)-dependent nitric oxide synthase activity in the injured site analysed 1 and 7 days after surgery. In segments remote from the epicentre of injury the inducible nitric oxide synthase activity was increased at both time points. Ca(2+)-dependent nitric oxide synthase activity had decreased in L5-S1 segments in a group of animals surviving for 7 days. A hemisection performed at thoracic level did not cause significant difference in the nitric oxide synthase activities and in the level of neuronal nitric oxide synthase protein between the contra- and ipsilateral sides in C6-Th1 and L5-S1 segments taken as a whole. Significant differences were observed, but only when the spinal cord was analysed segment by segment, and/or was divided into dorsal and ventral parts. The cell counts in the cervicothoracic (C7-Th1) and lumbosacral (L5-S1) enlargements revealed changes in neuronal nitric oxide synthase immunoreactivity on the ipsilateral side of the injury. The densitometric area measurements confirmed the reduction of somal, neuropil and axonal neuronal nitric oxide synthase immunoreactive staining in

  10. Discrete vector solitons in one-dimensional lattices in photorefractive media

    NASA Astrophysics Data System (ADS)

    Fitrakis, E. P.; Kevrekidis, P. G.; Malomed, B. A.; Frantzeskakis, D. J.

    2006-08-01

    We construct families of two-component spatial solitons in a one-dimensional lattice with saturable on-site nonlinearity (focusing or defocusing) in a photorefractive crystal. We identify 14 species of vector solitons, depending on their type (bright/dark), phase (in-phase/staggered), and location on the lattice (on/off-site). Two species of the bright/bright type form entirely stable soliton families, four species are partially stable (depending on the value of the propagation constant), while the remaining eight species are completely unstable. “Symbiotic” soliton pairs (of the bright/dark type), which contain components that cannot exist in isolation in the same model, are found as well.

  11. Thin-walled reinforcement lattice structure for hollow CMC buckets

    DOEpatents

    de Diego, Peter

    2017-06-27

    A hollow ceramic matrix composite (CMC) turbine bucket with an internal reinforcement lattice structure has improved vibration properties and stiffness. The lattice structure is formed of thin-walled plies made of CMC. The wall structures are arranged and located according to high stress areas within the hollow bucket. After the melt infiltration process, the mandrels melt away, leaving the wall structure to become the internal lattice reinforcement structure of the bucket.

  12. Cultural Resources Investigation of the Reservoir Shorelines: Gull Lake, Leech Lake, Pine River and Lake Pokegama. Volume 2. Site Location Data.

    DTIC Science & Technology

    1979-06-01

    affiliation Malmo (Middle Woodland ); Blackduck 4. Location: Sec. 4 Twp. 135N R. 29W Verbal description E NWk north end Upper Gull; just east of bridge over...affiliation Woodland 4. Location: Sec. 25 Twp. 134N R. 30W Verbal description NWk SEk on the southeast arm of the southwest part of Wilson Bay, Gull...mound, village, etc.) mound? burial? 2. Map reference USGS Gull Lake 3. Cultural affiliation Woodland and Historic 4. Location: Sec. 21 Tp. 135N R. 29W

  13. Lattice location and local magnetism of recoil implanted Fe impurities in wide and narrow band semiconductors CdTe, CdSe, and InSb: Experiment and theory

    SciTech Connect

    Mohanta, S. K.; Mishra, S. N.

    2014-05-07

    Employing the time differential perturbed angular distribution method, we have measured local susceptibility and spin relaxation rate of {sup 54}Fe nuclei implanted in III-V and II-VI semiconductors, CdTe, CdSe, and InSb. The magnetic response of Fe, identified to occupy the metal as well as the semi-metal atom sites, exhibit Curie-Weiss type susceptibility and Korringa like spin relaxation rate, revealing the existence of localized moments with small spin fluctuation temperature. The experimental results are supported by first principle electronic structure calculations performed within the frame work of density functional theory.

  14. Enumerations of Lattice Animals and Trees

    NASA Astrophysics Data System (ADS)

    Jensen, Iwan

    2001-02-01

    We have developed an improved algorithm that allows us to enumerate the number of site animals on the square lattice up to size 46. We also calculate the number of lattice trees up to size 44 and the radius of gyration of both lattice animals and trees up to size 42. Analysis of the resulting series yields an improved estimate, λ=4.062570(8), for the growth constant of lattice animals, and, λ0=3.795254(8), for the growth constant of trees, and confirms to a very high degree of certainty that both the animal and tree generating functions have a logarithmic divergence. Analysis of the radius of gyration series yields the estimate, ν=0.64115(5), for the size exponent.

  15. Renormalization transformation of periodic and aperiodic lattices

    SciTech Connect

    Macia, Enrique; Rodriguez-Oliveros, Rogelio

    2006-10-01

    In this work we introduce a similarity transformation acting on transfer matrices describing the propagation of elementary excitations through either periodic or Fibonacci lattices. The proposed transformation can act at two different scale lengths. At the atomic scale the transformation allows one to express the systems' global transfer matrix in terms of an equivalent on-site model one. Correlation effects among different hopping terms are described by a series of local phase factors in that case. When acting on larger scale lengths, corresponding to short segments of the original lattice, the similarity transformation can be properly regarded as describing an effective renormalization of the chain. The nature of the resulting renormalized lattice significantly depends on the kind of order (i.e., periodic or quasiperiodic) of the original lattice, expressing a delicate balance between chemical complexity and topological order as a consequence of the renormalization process.

  16. We are in need of sampling the sedimentary cover and bedrock in the Amerasia Basin. (Suggested site locations in the Makarov Basin, the Mendeleev and Lomonosov ridges and adjacent areas.)

    NASA Astrophysics Data System (ADS)

    Lebedeva-Ivanova, N. N.

    2010-12-01

    The Amerasia Basin has a complex origin; alone, the geophysical data can support very different hypotheses. For understanding the tectonic evolution of the Basin and origin of the ridges and troughs it is important to collect geological samples. Based on analyzed seismic data (NP-28 and 26, HOTRAX, Arctic-2000 and TransArctic) over the Makarov Basin, the Mendeleev and Lomonosov ridges and adjacent areas, numbers of key drill sites are proposed. All proposed sites in combinations with other geophysical research of the area are fit well with most of the Site Survey Data Requirements (IODP) for a drilling site. Bedrock samples from key locations are especially needed, with full video or photo documentation of the sampling for avoiding later debates about whether bedrock or ice-drift was collected. Due to close locations to a sea bottom, bedrock can be sampled by gravity piston-cores or shallow drilling. Full stratigraphic sections though the Cenozoic and older sedimentary successions are needed at other proposed key locations for understanding the tectonic evolution of the Amerasia Basin. The depositional environment of the key reflections related to Cenozoic shallow water environments, as recorded in the ACEX drillholes, needs to be investigated in other locations. We will then be able to define better the nature of particular morphological features and construct more reliable tectonic models of the Amerasia Basin, in general.

  17. Dissipative photonic lattice solitons.

    PubMed

    Ultanir, Erdem A; Stegeman, George I; Christodoulides, Demetrios N

    2004-04-15

    We show that discrete dissipative optical lattice solitons are possible in waveguide array configurations that involve periodically patterned semiconductor optical amplifiers and saturable absorbers. The characteristics of these low-power soliton states are investigated, and their propagation constant eigenvalues are mapped on Floquet-Bloch band diagrams. The prospect of observing such low-power dissipative lattice solitons is discussed in detail.

  18. Structural Phase Transitions of Vortex Matter in an Optical Lattice

    SciTech Connect

    Pu, H.; Yi, S.; Baksmaty, L.O.; Bigelow, N.P.

    2005-05-20

    We consider the vortex structure of a rapidly rotating trapped atomic Bose-Einstein condensate in the presence of a corotating periodic optical lattice potential. We observe a rich variety of structural phases which reflect the interplay of the vortex-vortex and vortex-lattice interactions. The lattice structure is very sensitive to the ratio of vortices to pinning sites and we observe structural phase transitions and domain formation as this ratio is varied.

  19. Facilitated diffusion in chromatin lattices: mechanistic diversity and regulatory potential.

    PubMed

    Kampmann, Martin

    2005-08-01

    The interaction between a protein and a specific DNA site is the molecular basis for vital processes in all organisms. Location of the DNA target site by the protein commonly involves facilitated diffusion. Mechanisms of facilitated diffusion vary among proteins; they include one- and two-dimensional sliding along DNA, direct transfer between uncorrelated sites, as well as combinations of these mechanisms. Facilitated diffusion has almost exclusively been studied in vitro. This review discusses facilitated diffusion in the context of the living cell and proposes a theoretical model for facilitated diffusion in chromatin lattices. Chromatin structure differentially affects proteins in different modes of diffusion. The interplay of facilitated diffusion and chromatin structure can determine the rate of protein association with the target site, the frequency of association-dissociation events at the target site, and, under particular conditions, the occupancy of the target site. Facilitated diffusion is required in vivo for efficient DNA repair and bacteriophage restriction and has potential roles in fine-tuning gene regulatory networks and kinetically compartmentalizing the eukaryotic nucleus.

  20. Archeological Site Location and Evaluation, Lake Dardanelle and Ozark Lake, McClellan-Kerr Arkansas River, Navigation System, West-Central, Arkansas

    DTIC Science & Technology

    1988-01-01

    this landform. The sites are separated by a large drainage ditch which, along with the intersection of two field access roads, has altered the terrain...paste rim sherd (pearlware?); hand-painted medium brown band; interior glaze altered after firing; lip sherd from plate? surface 1 whiteware, soft...shallow-buried anthropic horizon (midden) at depths ranging across the site from 30 to 40cm. This surface formed the upper portion of a shallow fine

  1. Electrical Resistivity Tomography and Ground Penetrating Radar for locating buried petrified wood sites: a case study in the natural monument of the Petrified Forest of Evros, Greece

    NASA Astrophysics Data System (ADS)

    Vargemezis, George; Diamanti, Nectaria; Tsourlos, Panagiotis; Fikos, Ilias

    2014-05-01

    A geophysical survey was carried out in the Petrified Forest of Evros, the northernmost regional unit of Greece. This collection of petrified wood has an age of approximately 35 million years and it is the oldest in Greece (i.e., older than the well-known Petrified Forest of Lesvos island located in the North Aegean Sea and which is possibly the largest of the petrified forests worldwide). Protection, development and maintenance projects still need to be carried out at the area despite all fears regarding the forest's fate since many petrified logs remain exposed both in weather conditions - leading to erosion - and to the public. This survey was conducted as part of a more extensive framework regarding the development and protection of this natural monument. Geophysical surveying has been chosen as a non-destructive investigation method since the area of application is both a natural ecosystem and part of cultural heritage. Along with electrical resistivity tomography (ERT), ground penetrating radar (GPR) surveys have been carried out for investigating possible locations of buried fossilized tree trunks. The geoelectrical sections derived from ERT data in combination with the GPR profiles provided a broad view of the subsurface. Two and three dimensional subsurface geophysical images of the surveyed area have been constructed, pointing out probable locations of petrified logs. Regarding ERT, petrified trunks have been detected as high resistive bodies, while lower resistivity values were more related to the surrounding geological materials. GPR surveying has also indicated buried petrified log locations. As these two geophysical methods are affected in different ways by the subsurface conditions, the combined use of both techniques enhanced our ability to produce more reliable interpretations of the subsurface. After the completion of the geophysical investigations of this first stage, petrified trunks were revealed after a subsequent excavation at indicated

  2. Modeling quasi-lattice with octagonal symmetry

    SciTech Connect

    Girzhon, V. V.; Smolyakov, O. V.; Zakharenko, M. I.

    2014-11-15

    We prove the possibility to use the method of modeling of a quasi-lattice with octagonal symmetry similar to that proposed earlier for the decagonal quasicrystal. The method is based on the multiplication of the groups of basis sites according to specified rules. This model is shown to be equivalent to the method of the periodic lattice projection, but is simpler because it considers merely two-dimensional site groups. The application of the proposed modeling procedure to the reciprocal lattice of octagonal quasicrystals shows a fairly good matching with the electron diffraction pattern. Similarly to the decagonal quasicrystals, the possibility of three-index labeling of the diffraction reflections is exhibited in this case. Moreover, the ascertained ratio of indices provides information on the intensity of diffraction reflections.

  3. Condensate oscillations in a Penrose tiling lattice

    NASA Astrophysics Data System (ADS)

    Akdeniz, Z.; Vignolo, P.

    2017-07-01

    We study the dynamics of a Bose-Einstein condensate subject to a particular Penrose tiling lattice. In such a lattice, the potential energy at each site depends on the neighbour sites, accordingly to the model introduced by Sutherland [16]. The Bose-Einstein wavepacket, initially at rest at the lattice symmetry center, is released. We observe a very complex time-evolution that strongly depends on the symmetry center (two choices are possible), on the potential energy landscape dispersion, and on the interaction strength. The condensate-width oscillates at different frequencies and we can identify large-frequency reshaping oscillations and low-frequency rescaling oscillations. We discuss in which conditions these oscillations are spatially bounded, denoting a self-trapping dynamics.

  4. Quasicrystallography from Bn lattices

    NASA Astrophysics Data System (ADS)

    Koca, M.; Koca, N. O.; Al-Mukhaini, A.; Al-Qanabi, A.

    2014-11-01

    We present a group theoretical analysis of the hypercubic lattice described by the affine Coxeter-Weyl group Wa (Bn). An h-fold symmetric quasicrystal structure follows from the hyperqubic lattice whose point group is described by the Coxeter-Weyl group W (Bn) with the Coxeter number h=2n. Higher dimensional cubic lattices are explicitly constructed for n = 4,5,6 by identifying their rank-3 Coxeter subgroups and maximal dihedral subgroups. Decomposition of their Voronoi cells under the respective rank-3 subgroups W (A3), W (H2)×W (A1) and W (H3)lead to the rhombic dodecahedron, rhombic icosahedron and rhombic triacontahedron respectively. Projection of the lattice B4 describes a quasicrystal structure with 8-fold symmetry. The B5 lattice leads to quasicrystals with both 5fold and 10 fold symmetries. The lattice B6 projects on a 12-fold symmetric quasicrystal as well as a 3D icosahedral quasicrystal depending on the choice of subspace of projections. The projected sets of lattice points are compatible with the available experimental data.

  5. Superalloy Lattice Block Structures

    NASA Technical Reports Server (NTRS)

    Whittenberger, J. D.; Nathal, M. V.; Hebsur, M. G.; Kraus, D. L.

    2003-01-01

    In their simplest form, lattice block panels are produced by direct casting and result in lightweight, fully triangulated truss-like configurations which provide strength and stiffness [2]. The earliest realizations of lattice block were made from A1 and steels, primarily under funding from the US Navy [3]. This work also showed that the mechanical efficiency (eg., specific stiffness) of lattice block structures approached that of honeycomb structures [2]. The lattice architectures are also less anisotropic, and the investment casting route should provide a large advantage in cost and temperature capability over honeycombs which are limited to alloys that can be processed into foils. Based on this early work, a program was initiated to determine the feasibility of extending the high temperature superalloy lattice block [3]. The objective of this effort was to provide an alternative to intermetallics and composites in achieving a lightweight high temperature structure without sacrificing the damage tolerance and moderate cost inherent in superalloys. To establish the feasibility of the superalloy lattice block concept, work was performed in conjunction with JAMCORP, Inc. Billerica, MA, to produce a number of lattice block panels from both IN71 8 and Mar-M247.

  6. A realistic lattice example

    SciTech Connect

    Courant, E.D.; Garren, A.A.

    1985-10-01

    A realistic, distributed interaction region (IR) lattice has been designed that includes new components discussed in the June 1985 lattice workshop. Unlike the test lattices, the lattice presented here includes utility straights and the mechanism for crossing the beams in the experimental straights. Moreover, both the phase trombones and the dispersion suppressors contain the same bending as the normal cells. Vertically separated beams and 6 Tesla, 1-in-1 magnets are assumed. Since the cells are 200 meters long, and have 60 degree phase advance, this lattice has been named RLD1, in analogy with the corresponding test lattice, TLD1. The quadrupole gradient is 136 tesla/meter in the cells, and has similar values in other quadrupoles except in those in the IR`s, where the maximum gradient is 245 tesla/meter. RLD1 has distributed IR`s; however, clustered realistic lattices can easily be assembled from the same components, as was recently done in a version that utilizes the same type of experimental and utility straights as those of RLD1.

  7. KENNEDY SPACE CENTER, FLA. - Dr. Paul Hintze (left) explains to Center Director Jim Kennedy a project he is working at the KSC Beach Corrosion Test Site. Hitze is doing post-graduate work for the National Research Council. The test facility site was established in the 1960s and has provided more than 30 years of historical information on the long-term performance of many materials in use at KSC and other locations around the world. Located 100 feet from the Atlantic Ocean approximately 1 mile south of the Space Shuttle launch sites, the test facility includes an atmospheric exposure site, a flowing seawater exposure site, and an on-site electrochemistry laboratory and monitoring station. The beach laboratory is used to conduct real-time corrosion experiments and provides for the remote monitoring of surrounding weather conditions. The newly added flowing seawater immersion facility provides for the immersion testing of materials and devices under controlled conditions.

    NASA Image and Video Library

    2003-08-21

    KENNEDY SPACE CENTER, FLA. - Dr. Paul Hintze (left) explains to Center Director Jim Kennedy a project he is working at the KSC Beach Corrosion Test Site. Hitze is doing post-graduate work for the National Research Council. The test facility site was established in the 1960s and has provided more than 30 years of historical information on the long-term performance of many materials in use at KSC and other locations around the world. Located 100 feet from the Atlantic Ocean approximately 1 mile south of the Space Shuttle launch sites, the test facility includes an atmospheric exposure site, a flowing seawater exposure site, and an on-site electrochemistry laboratory and monitoring station. The beach laboratory is used to conduct real-time corrosion experiments and provides for the remote monitoring of surrounding weather conditions. The newly added flowing seawater immersion facility provides for the immersion testing of materials and devices under controlled conditions.

  8. kmos: A lattice kinetic Monte Carlo framework

    NASA Astrophysics Data System (ADS)

    Hoffmann, Max J.; Matera, Sebastian; Reuter, Karsten

    2014-07-01

    Kinetic Monte Carlo (kMC) simulations have emerged as a key tool for microkinetic modeling in heterogeneous catalysis and other materials applications. Systems, where site-specificity of all elementary reactions allows a mapping onto a lattice of discrete active sites, can be addressed within the particularly efficient lattice kMC approach. To this end we describe the versatile kmos software package, which offers a most user-friendly implementation, execution, and evaluation of lattice kMC models of arbitrary complexity in one- to three-dimensional lattice systems, involving multiple active sites in periodic or aperiodic arrangements, as well as site-resolved pairwise and higher-order lateral interactions. Conceptually, kmos achieves a maximum runtime performance which is essentially independent of lattice size by generating code for the efficiency-determining local update of available events that is optimized for a defined kMC model. For this model definition and the control of all runtime and evaluation aspects kmos offers a high-level application programming interface. Usage proceeds interactively, via scripts, or a graphical user interface, which visualizes the model geometry, the lattice occupations and rates of selected elementary reactions, while allowing on-the-fly changes of simulation parameters. We demonstrate the performance and scaling of kmos with the application to kMC models for surface catalytic processes, where for given operation conditions (temperature and partial pressures of all reactants) central simulation outcomes are catalytic activity and selectivities, surface composition, and mechanistic insight into the occurrence of individual elementary processes in the reaction network.

  9. Jammed lattice sphere packings

    NASA Astrophysics Data System (ADS)

    Kallus, Yoav; Marcotte, Étienne; Torquato, Salvatore

    2013-12-01

    We generate and study an ensemble of isostatic jammed hard-sphere lattices. These lattices are obtained by compression of a periodic system with an adaptive unit cell containing a single sphere until the point of mechanical stability. We present detailed numerical data about the densities, pair correlations, force distributions, and structure factors of such lattices. We show that this model retains many of the crucial structural features of the classical hard-sphere model and propose it as a model for the jamming and glass transitions that enables exploration of much higher dimensions than are usually accessible.

  10. Nearest-neighbor detection of atoms in a 1D optical lattice by fluorescence imaging.

    PubMed

    Karski, M; Förster, L; Choi, J M; Alt, W; Widera, A; Meschede, D

    2009-02-06

    We overcome the diffraction limit in fluorescence imaging of neutral atoms in a sparsely filled one-dimensional optical lattice. At a periodicity of 433 nm, we reliably infer the separation of two atoms down to nearest neighbors. We observe light induced losses of atoms occupying the same lattice site, while for atoms in adjacent lattice sites, no losses due to light induced interactions occur. Our method points towards characterization of correlated quantum states in optical lattice systems with filling factors of up to one atom per lattice site.

  11. Determination of structure of the MinD-ATP complex reveals the orientation of MinD on the membrane and the relative location of the binding sites for MinE and MinC

    PubMed Central

    Wu, Wei; Park, Kyung-Tae; Holyoak, Todd; Lutkenhaus, Joe

    2011-01-01

    Summary The three Min proteins spatially regulate Z ring positioning in E. coli and are dynamically associated with the membrane. MinD binds to vesicles in the presence of ATP and can recruit MinC or MinE. Biochemical and genetic evidence indicate the binding sites for these two proteins on MinD overlap. Here we solved the structure of a hydrolytic-deficient mutant of MinD truncated for the C-terminal amphipathic helix involved in binding to the membrane. The structure solved in the presence of ATP is a dimer and reveals the face of MinD abutting the membrane. Using a combination of random and extensive site-directed mutagenesis additional residues important for MinE and MinC binding were identified. The location of these residues on the MinD structure confirms that the binding sites overlap and reveals that the binding sites are at the dimer interface and exposed to the cytosol. The location of the binding sites at the dimer interface offers a simple explanation for the ATP-dependency of MinC and MinE binding to MinD. PMID:21231967

  12. Lattice effects on Laughlin wave functions and parent Hamiltonians

    NASA Astrophysics Data System (ADS)

    Glasser, Ivan; Cirac, J. Ignacio; Sierra, Germán; Nielsen, Anne E. B.

    2016-12-01

    We investigate lattice effects on wave functions that are lattice analogs of bosonic and fermionic Laughlin wave functions with number of particles per flux ν =1 /q in the Landau levels. These wave functions are defined analytically on lattices with μ particles per lattice site, where μ may be different than ν . We give numerical evidence that these states have the same topological properties as the corresponding continuum Laughlin states for different values of q and for different fillings μ . These states define, in particular, particle-hole symmetric lattice fractional quantum Hall states when the lattice is half filled. On the square lattice it is observed that for q ≤4 this particle-hole symmetric state displays the topological properties of the continuum Laughlin state at filling fraction ν =1 /q , while for larger q there is a transition towards long-range ordered antiferromagnets. This effect does not persist if the lattice is deformed from a square to a triangular lattice, or on the kagome lattice, in which case the topological properties of the state are recovered. We then show that changing the number of particles while keeping the expression of these wave functions identical gives rise to edge states that have the same correlations in the bulk as the reference lattice Laughlin states but a different density at the edge. We derive an exact parent Hamiltonian for which all these edge states are ground states with different number of particles. In addition this Hamiltonian admits the reference lattice Laughlin state as its unique ground state of filling factor 1 /q . Parent Hamiltonians are also derived for the lattice Laughlin states at other fillings of the lattice, when μ ≤1 /q or μ ≥1 -1 /q and when q =4 also at half filling.

  13. Percolation threshold of a class of correlated lattices

    NASA Astrophysics Data System (ADS)

    Mendelson, Kenneth S.

    1997-12-01

    Investigations have been made of the percolation threshold of correlated site percolation lattices based on the convolution of a smoothing function with random white noise as suggested by Crossley, Schwartz, and Banavar. The dependence of percolation threshold on correlation length has been studied for several smoothing functions, lattice types, and lattice sizes. All results can be fit by a Gaussian function of the correlation length w, pc=p∞c+(p0c-p∞c)e-αw2. For two-dimensional, matching lattices the thresholds satisfy the Sykes-Essam relation pc(L)+pc(L*)=1.

  14. Lattice matched semiconductor growth on crystalline metallic substrates

    DOEpatents

    Norman, Andrew G; Ptak, Aaron J; McMahon, William E

    2013-11-05

    Methods of fabricating a semiconductor layer or device and said devices are disclosed. The methods include but are not limited to providing a metal or metal alloy substrate having a crystalline surface with a known lattice parameter (a). The methods further include growing a crystalline semiconductor alloy layer on the crystalline substrate surface by coincident site lattice matched epitaxy. The semiconductor layer may be grown without any buffer layer between the alloy and the crystalline surface of the substrate. The semiconductor alloy may be prepared to have a lattice parameter (a') that is related to the lattice parameter (a). The semiconductor alloy may further be prepared to have a selected band gap.

  15. SPIN ON THE LATTICE.

    SciTech Connect

    ORGINOS,K.

    2003-01-07

    I review the current status of hadronic structure computations on the lattice. I describe the basic lattice techniques and difficulties and present some of the latest lattice results; in particular recent results of the RBC group using domain wall fermions are also discussed. In conclusion, lattice computations can play an important role in understanding the hadronic structure and the fundamental properties of Quantum Chromodynamics (QCD). Although some difficulties still exist, several significant steps have been made. Advances in computer technology are expected to play a significant role in pushing these computations closer to the chiral limit and in including dynamical fermions. RBC has already begun preliminary dynamical domain wall fermion computations [49] which we expect to be pushed forward with the arrival of QCD0C. In the near future, we also expect to complete the non-perturbative renormalization of the relevant derivative operators in quenched QCD.

  16. Root lattices and quasicrystals

    NASA Astrophysics Data System (ADS)

    Baake, M.; Joseph, D.; Kramer, P.; Schlottmann, M.

    1990-10-01

    It is shown that root lattices and their reciprocals might serve as the right pool for the construction of quasicrystalline structure models. All noncrystallographic symmetries observed so far are covered in minimal embedding with maximal symmetry.

  17. Root lattices and quasicrystals

    NASA Astrophysics Data System (ADS)

    Baake, M.; Joseph, D.; Kramer, P.; Schlottmann, M.

    1990-10-01

    It is shown how root lattices and their reciprocals might serve as the right pool for the construction of quasicrystalline structure models. All non-periodic symmetries observed so far are covered in minimal embedding with maximal symmetry.

  18. Superalloy Lattice Block Structures

    NASA Technical Reports Server (NTRS)

    Nathal, M. V.; Whittenberger, J. D.; Hebsur, M. G.; Kantzos, P. T.; Krause, D. L.

    2004-01-01

    Initial investigations of investment cast superalloy lattice block suggest that this technology will yield a low cost approach to utilize the high temperature strength and environmental resistance of superalloys in lightweight, damage tolerant structural configurations. Work to date has demonstrated that relatively large superalloy lattice block panels can be successfully investment cast from both IN-718 and Mar-M247. These castings exhibited mechanical properties consistent with the strength of the same superalloys measured from more conventional castings. The lattice block structure also accommodates significant deformation without failure, and is defect tolerant in fatigue. The potential of lattice block structures opens new opportunities for the use of superalloys in future generations of aircraft applications that demand strength and environmental resistance at elevated temperatures along with low weight.

  19. Asymptotic energy of lattices

    NASA Astrophysics Data System (ADS)

    Yan, Weigen; Zhang, Zuhe

    2009-04-01

    The energy of a simple graph G arising in chemical physics, denoted by E(G), is defined as the sum of the absolute values of eigenvalues of G. As the dimer problem and spanning trees problem in statistical physics, in this paper we propose the energy per vertex problem for lattice systems. In general for a type of lattice in statistical physics, to compute the entropy constant with toroidal, cylindrical, Mobius-band, Klein-bottle, and free boundary conditions are different tasks with different hardness and may have different solutions. We show that the energy per vertex of plane lattices is independent of the toroidal, cylindrical, Mobius-band, Klein-bottle, and free boundary conditions. In particular, the asymptotic formulae of energies of the triangular, 33.42, and hexagonal lattices with toroidal, cylindrical, Mobius-band, Klein-bottle, and free boundary conditions are obtained explicitly.

  20. Use of a novel Förster resonance energy transfer method to identify locations of site-bound metal ions in the U2-U6 snRNA complex.

    PubMed

    Yuan, Faqing; Griffin, Laura; Phelps, LauraJane; Buschmann, Volker; Weston, Kenneth; Greenbaum, Nancy L

    2007-01-01

    U2 and U6 snRNAs pair to form a phylogenetically conserved complex at the catalytic core of the spliceosome. Interactions with divalent metal ions, particularly Mg(II), at specific sites are essential for its folding and catalytic activity. We used a novel Förster resonance energy transfer (FRET) method between site-bound luminescent lanthanide ions and a covalently attached fluorescent dye, combined with supporting stoichiometric and mutational studies, to determine locations of site-bound Tb(III) within the human U2-U6 complex. At pH 7.2, we detected three metal-ion-binding sites in: (1) the consensus ACACAGA sequence, which forms the internal loop between helices I and III; (2) the four-way junction, which contains the conserved AGC triad; and (3) the internal loop of the U6 intra-molecular stem loop (ISL). Binding at each of these sites is supported by previous phosphorothioate substitution studies and, in the case of the ISL site, by NMR. Binding of Tb(III) at the four-way junction and the ISL sites was found to be pH-dependent, with no ion binding observed below pH 6 and 7, respectively. This pH dependence of metal ion binding suggests that the local environment may play a role in the binding of metal ions, which may impact on splicing activity.