Sample records for layer depth mld

  1. Defining the ecologically relevant mixed-layer depth for Antarctica's coastal seas

    NASA Astrophysics Data System (ADS)

    Carvalho, Filipa; Kohut, Josh; Oliver, Matthew J.; Schofield, Oscar

    2017-01-01

    Mixed-layer depth (MLD) has been widely linked to phytoplankton dynamics in Antarctica's coastal regions; however, inconsistent definitions have made intercomparisons among region-specific studies difficult. Using a data set with over 20,000 water column profiles corresponding to 32 Slocum glider deployments in three coastal Antarctic regions (Ross Sea, Amundsen Sea, and West Antarctic Peninsula), we evaluated the relationship between MLD and phytoplankton vertical distribution. Comparisons of these MLD estimates to an applied definition of phytoplankton bloom depth, as defined by the deepest inflection point in the chlorophyll profile, show that the maximum of buoyancy frequency is a good proxy for an ecologically relevant MLD. A quality index is used to filter profiles where MLD is not determined. Despite the different regional physical settings, we found that the MLD definition based on the maximum of buoyancy frequency best describes the depth to which phytoplankton can be mixed in Antarctica's coastal seas.

  2. Real-time handling of existing content sources on a multi-layer display

    NASA Astrophysics Data System (ADS)

    Singh, Darryl S. K.; Shin, Jung

    2013-03-01

    A Multi-Layer Display (MLD) consists of two or more imaging planes separated by physical depth where the depth is a key component in creating a glasses-free 3D effect. Its core benefits include being viewable from multiple angles, having full panel resolution for 3D effects with no side effects of nausea or eye-strain. However, typically content must be designed for its optical configuration in foreground and background image pairs. A process was designed to give a consistent 3D effect in a 2-layer MLD from existing stereo video content in real-time. Optimizations to stereo matching algorithms that generate depth maps in real-time were specifically tailored for the optical characteristics and image processing algorithms of a MLD. The end-to-end process included improvements to the Hierarchical Belief Propagation (HBP) stereo matching algorithm, improvements to optical flow and temporal consistency. Imaging algorithms designed for the optical characteristics of a MLD provided some visual compensation for depth map inaccuracies. The result can be demonstrated in a PC environment, displayed on a 22" MLD, used in the casino slot market, with 8mm of panel seperation. Prior to this development, stereo content had not been used to achieve a depth-based 3D effect on a MLD in real-time

  3. Seasonal variation of the global mixed layer depth: comparison between Argo data and FIO-ESM

    NASA Astrophysics Data System (ADS)

    Zhang, Yutong; Xu, Haiming; Qiao, Fangli; Dong, Changming

    2018-03-01

    The present study evaluates a simulation of the global ocean mixed layer depth (MLD) using the First Institute of Oceanography-Earth System Model (FIOESM). The seasonal variation of the global MLD from the FIO-ESM simulation is compared to Argo observational data. The Argo data show that the global ocean MLD has a strong seasonal variation with a deep MLD in winter and a shallow MLD in summer, while the spring and fall seasons act as transitional periods. Overall, the FIO-ESM simulation accurately captures the seasonal variation in MLD in most areas. It exhibits a better performance during summer and fall than during winter and spring. The simulated MLD in the Southern Hemisphere is much closer to observations than that in the Northern Hemisphere. In general, the simulated MLD over the South Atlantic Ocean matches the observation best among the six areas. Additionally, the model slightly underestimates the MLD in parts of the North Atlantic Ocean, and slightly overestimates the MLD over the other ocean basins.

  4. Evaluating the Sonic Layer Depth Relative to the Mixed Layer Depth

    DTIC Science & Technology

    2008-07-24

    upper ocean to trap acoustic energy in a surface duct while MLD characterizes upper ocean mixing. The SLD is computed from temperature and salinity...and compared over the annual cycle. The SLD characterizes the potential of the upper ocean to trap acoustic energy in a surface duct while MLD...exists a tropical cyclone formation [e.g., Mao et al., 2000], to Minimum acoustic Cutoff Frequency (MCF) above which phytoplankton bloom critical depth

  5. Mixed and mixing layer depths in the ocean surface boundary layer under conditions of diurnal stratification

    NASA Astrophysics Data System (ADS)

    Sutherland, G.; Reverdin, G.; Marié, L.; Ward, B.

    2014-12-01

    A comparison between mixed (MLD) and mixing (XLD) layer depths is presented from the SubTRopical Atlantic Surface Salinity Experiment (STRASSE) cruise in the subtropical Atlantic. This study consists of 400 microstructure profiles during fairly calm and moderate conditions (2 < U10 < 10 m s-1) and strong solar heating O(1000 W m-2). The XLD is determined from a decrease in the turbulent dissipation rate to an assumed background level. Two different thresholds for the background dissipation level are tested, 10-8 and 10-9 m2 s-3, and these are compared with the MLD as calculated using a density threshold. The larger background threshold agrees with the MLD during restratification but only extends to half the MLD during nighttime convection, while the lesser threshold agrees well during convection but is deeper by a factor of 2 during restratification. Observations suggest the use of a larger density threshold to determine the MLD in a buoyancy driven regime.

  6. A comparison of hydrographically and optically derived mixed layer depths

    USGS Publications Warehouse

    Zawada, D.G.; Zaneveld, J.R.V.; Boss, E.; Gardner, W.D.; Richardson, M.J.; Mishonov, A.V.

    2005-01-01

    Efforts to understand and model the dynamics of the upper ocean would be significantly advanced given the ability to rapidly determine mixed layer depths (MLDs) over large regions. Remote sensing technologies are an ideal choice for achieving this goal. This study addresses the feasibility of estimating MLDs from optical properties. These properties are strongly influenced by suspended particle concentrations, which generally reach a maximum at pycnoclines. The premise therefore is to use a gradient in beam attenuation at 660 nm (c660) as a proxy for the depth of a particle-scattering layer. Using a global data set collected during World Ocean Circulation Experiment cruises from 1988-1997, six algorithms were employed to compute MLDs from either density or temperature profiles. Given the absence of published optically based MLD algorithms, two new methods were developed that use c660 profiles to estimate the MLD. Intercomparison of the six hydrographically based algorithms revealed some significant disparities among the resulting MLD values. Comparisons between the hydrographical and optical approaches indicated a first-order agreement between the MLDs based on the depths of gradient maxima for density and c660. When comparing various hydrographically based algorithms, other investigators reported that inherent fluctuations of the mixed layer depth limit the accuracy of its determination to 20 m. Using this benchmark, we found a ???70% agreement between the best hydrographical-optical algorithm pairings. Copyright 2005 by the American Geophysical Union.

  7. A Non-Fickian Mixing Model for Stratified Turbulent Flows

    DTIC Science & Technology

    2013-09-30

    lateral gradients in the mixed layer, indicative of surface fronts, and with the magnitude of mixed layer depth MLD. Direct testing with our results shows...both are induced by atmospheric forcing. In our case, atmospheric fluxes and wind forcing are still the cause of SM occurrence, but mostly through their...California upwelling simulations, where MLD did not change significantly between HR and LR simulations. As suggested by Capet et al. (2008b), this is likely

  8. Intercomparison and validation of the mixed layer depth fields of global ocean syntheses

    NASA Astrophysics Data System (ADS)

    Toyoda, Takahiro; Fujii, Yosuke; Kuragano, Tsurane; Kamachi, Masafumi; Ishikawa, Yoichi; Masuda, Shuhei; Sato, Kanako; Awaji, Toshiyuki; Hernandez, Fabrice; Ferry, Nicolas; Guinehut, Stéphanie; Martin, Matthew J.; Peterson, K. Andrew; Good, Simon A.; Valdivieso, Maria; Haines, Keith; Storto, Andrea; Masina, Simona; Köhl, Armin; Zuo, Hao; Balmaseda, Magdalena; Yin, Yonghong; Shi, Li; Alves, Oscar; Smith, Gregory; Chang, You-Soon; Vernieres, Guillaume; Wang, Xiaochun; Forget, Gael; Heimbach, Patrick; Wang, Ou; Fukumori, Ichiro; Lee, Tong

    2017-08-01

    Intercomparison and evaluation of the global ocean surface mixed layer depth (MLD) fields estimated from a suite of major ocean syntheses are conducted. Compared with the reference MLDs calculated from individual profiles, MLDs calculated from monthly mean and gridded profiles show negative biases of 10-20 m in early spring related to the re-stratification process of relatively deep mixed layers. Vertical resolution of profiles also influences the MLD estimation. MLDs are underestimated by approximately 5-7 (14-16) m with the vertical resolution of 25 (50) m when the criterion of potential density exceeding the 10-m value by 0.03 kg m-3 is used for the MLD estimation. Using the larger criterion (0.125 kg m-3) generally reduces the underestimations. In addition, positive biases greater than 100 m are found in wintertime subpolar regions when MLD criteria based on temperature are used. Biases of the reanalyses are due to both model errors and errors related to differences between the assimilation methods. The result shows that these errors are partially cancelled out through the ensemble averaging. Moreover, the bias in the ensemble mean field of the reanalyses is smaller than in the observation-only analyses. This is largely attributed to comparably higher resolutions of the reanalyses. The robust reproduction of both the seasonal cycle and interannual variability by the ensemble mean of the reanalyses indicates a great potential of the ensemble mean MLD field for investigating and monitoring upper ocean processes.

  9. Molecular layer deposition of alucone films using trimethylaluminum and hydroquinone

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Choudhury, Devika; Sarkar, Shaibal K., E-mail: shaibal.sarkar@iitb.ac.in; Mahuli, Neha

    2015-01-01

    A hybrid organic–inorganic polymer film grown by molecular layer deposition (MLD) is demonstrated here. Sequential exposures of trimethylaluminum [Al(CH{sub 3}){sub 3}] and hydroquinone [C{sub 6}H{sub 4}(OH){sub 2}] are used to deposit the polymeric films, which is a representative of a class of aluminum oxide polymers known as “alucones.” In-situ quartz crystal microbalance (QCM) studies are employed to determine the growth characteristics. An average growth rate of 4.1 Å per cycle at 150 °C is obtained by QCM and subsequently verified with x-ray reflectivity measurements. Surface chemistry during each MLD-half cycle is studied in depth by in-situ Fourier transform infrared (FTIR) vibrationmore » spectroscopy. Self limiting nature of the reaction is confirmed from both QCM and FTIR measurements. The conformal nature of the deposit, typical for atomic layer deposition and MLD, is verified with transmission electron microscopy imaging. Secondary ion mass spectroscopy measurements confirm the uniform elemental distribution along the depth of the films.« less

  10. Seasonal Variation of Submesoscale Flow Features in a Mesoscale Eddy-dominant Region in the East Sea

    NASA Astrophysics Data System (ADS)

    Chang, Yeon S.; Choi, Byoung-Ju; Park, Young-Gyu

    2018-03-01

    Seasonal changes in the distribution of submesoscale (SM) flow features were examined using a fine-resolution numerical simulation. The SM flows are expected to be strong where mesoscale (MS) eddies actively develop and also when the mixed layer depth (MLD) is deep due to enhanced baroclinic instability. In the East Sea (ES), MS eddies more actively develop in summer while the MLD is deeper in winter, which provided the motivation to conduct this study to test the effects of MLD and MS eddies on the SM activity in this region. Finite-scale Liapunov exponents and the vertical velocity components were employed to analyze the SM activities. It was found that the SM intensity was marked by seasonality: it is stronger in winter when the mixed layer is deep but weaker in summer - despite the greater eddy kinetic energy. This is because in summer the mixed layer is so thin that there is not enough available potential energy. When the SM activity was quantified based on parameterization, (MLD × density gradient), it was determined that the seasonal variation of MLD plays a more important role than the lateral density gradient variation on SM flow motion in the ES.

  11. Deciphering the Temporal and Spatial Complexity in Submarine Canyons in Antarctica: the Role of Mixed Layer Depth in Regulating Primary Production

    NASA Astrophysics Data System (ADS)

    Carvalho, F.; Kohut, J. T.; Schofield, O.; Oliver, M. J.; Gorbunov, M. Y.

    2016-02-01

    There is a high spatial and temporal variability in the biophysical processes regulating primary productivity in submarine canyons in the West Antarctic Peninsula (WAP). WAP canyon heads are considered biological "hotspots" by providing predictable food resource and driving penguin foraging locations. Because the physiology and composition of the phytoplankton blooms and the physical mechanisms driving them aren't well understood, we aim to characterize the dynamics of the spring phytoplankton bloom at the head of a canyon in the WAP. A 6-year record of Slocum glider deployments is analyzed, corresponding to over 16,000 water column profiles. The mixed layer depth (MLD), determined by the maximum of the buoyancy frequency criteria, was found to be the MLD definition with the highest ecological relevance. The same holds true for other regions in Antarctica such as the Ross and Amundsen Seas. A FIRe sensor on a glider was used to evaluate physiological responses of phytoplankton to canyon dynamics using fluorescence kinetics. Initial results show a spatial influence, with increased photosynthetic efficiencies found at the canyon head. The strongest signal was the seasonal cycle. The shoaling of the MLD in early January results in increased chlorophyll a concentrations and as MLD deepens in mid season due to wind forcing, phytoplankton concentrations decrease, likely due to decreased light availability. A consistent secondary peak in chlorophyll matches a shoaling in MLD later in the growth season. A steady warming and increase in salinity of the MLD is seen throughout the season. Spatial differences were recorded at the head of the canyon and result from the local circulation. Shallower MLD found on the northern region are consistent with a fresher surface ocean (coastal influence) and increased chlorophyll concentrations. The southern region is thought to be more oceanic influenced as intrusions of warm deep water (mUCDW) to the upper water column were recorded regularly there.

  12. Interannual variability of Indian Ocean subtropical mode water subduction rate

    NASA Astrophysics Data System (ADS)

    Ma, Jie; Lan, Jian

    2017-06-01

    The interannual variation of Indian Ocean subtropical mode water (IOSTMW) subduction rate in the Southwest Indian Ocean from 1980 to 2007 is investigated in this paper based on Simple Ocean Data Assimilation (SODA) outputs. Climatology of subduction rate exceeds 75 m/year in the IOSTMW formation area. The renewal time of permanent pycnocline water mass based on the subduction rate is calculated for each density class: 3-6 years for IOSTMW (25.8 < σ θ < 26.2 kg m-3). Subduction rate in the Southwest Indian Ocean subtropical gyre exhibits a great year-to-year variability. This interannual variations of the IOSTMW subduction rate is primarily dominated by the lateral induction term, associated with the interannual variations of strong meridional gradient of winter mixed layer depth (MLD). The slope of the mixed layer depth in the mode water is closely linked to the large variations of deep late winter MLD in the mid-latitudes and negligible variations of shallow winter MLD in lower latitudes. It is further identified that the interannual variation of late winter MLD in this area is largely controlled by the latent and sensible heat flux components. The water volume of the permanent pycnocline in the IOSTMW distribution area is also found to show a significant interannual variability, and it is well correlated with the interannual variation of subduction rate.

  13. Seasonal cycle of oceanic mixed layer and upper-ocean heat fluxes in the Mediterranean Sea from in-situ observations.

    NASA Astrophysics Data System (ADS)

    Houpert, Loïc; Testor, Pierre; Durrieu de Madron, Xavier; Estournel, Claude; D'Ortenzio, Fabrizio

    2013-04-01

    Heat fluxes across the ocean-atmosphere interface play a crucial role in the upper turbulent mixing. The depth reached by this turbulent mixing is indicated by an homogenization of seawater properties in the surface layer, and is defined as the Mixed Layer Depth (MLD). The thickness of the mixed layer determines also the heat content of the layer that directly interacts with the atmosphere. The seasonal variability of these air-sea fluxes is crucial in the calculation of heat budget. An improvement in the estimate of these fluxes is needed for a better understanding of the Mediterranean ocean circulation and climate, in particular in Regional Climate Models. There are few estimations of surface heat fluxes based on oceanic observations in the Mediterranean, and none of them are based on mixed layer observations. So, we proposed here new estimations of these upper-ocean heat fluxes based on mixed layer. We present high resolution Mediterranean climatology (0.5°) of the mean MLD based on a comprehensive collection of temperature profiles of last 43 years (1969-2012). The database includes more than 150,000 profiles, merging CTD, XBT, ARGO Profiling floats, and gliders observations. This dataset is first used to describe the seasonal cycle of the mixed layer depth on the whole Mediterranean on a monthly climatological basis. Our analysis discriminates several regions with coherent behaviors, in particular the deep water formation sites, characterized by significant differences in the winter mixing intensity. Heat storage rates (HSR) were calculated as the time rate of change of the heat content integrated from the surface down to a specific depth that is defined as the MLD plus an integration constant. Monthly climatology of net heat flux (NHF) from ERA-Interim reanalysis was balanced by the 1°x1° resolution heat storage rate climatology. Local heat budget balance and seasonal variability in the horizontal heat flux are then discussed by taking into account uncertainties, due to errors in monthly value estimation and to intra-annual and inter-annual variability.

  14. Importance of solar subsurface heating in ocean general circulation models

    NASA Astrophysics Data System (ADS)

    Rochford, Peter A.; Kara, A. Birol; Wallcraft, Alan J.; Arnone, Robert A.

    2001-12-01

    The importance of subsurface heating on surface mixed layer properties in an ocean general circulation model (OGCM) is examined using attenuation of solar irradiance with depth below the ocean surface. The depth-dependent attenuation of subsurface heating is given by global monthly mean fields for the attenuation of photosynthetically available radiation (PAR), kPAR. These global fields of kPAR are derived from Sea-viewing Wide Field-of-view Sensor (SeaWiFS) data on the spectral diffuse attenuation coefficient at 490 nm (k490), and have been processed to have the smoothly varying and continuous coverage necessary for use in OGCM applications. These monthly fields provide the first complete global data sets of subsurface optical fields that can be used for OGCM applications of subsurface heating and bio-optical processes. The effect on global OGCM prediction of sea surface temperature (SST) and surface mixed layer depth (MLD) is examined when solar heating, as given by monthly mean kPAR and PAR fields, is included in the model. It is found that subsurface heating yields a marked increase in the SST predictive skill of the OGCM at low latitudes. No significant improvement in MLD predictive skill is obtained when including subsurface heating. Use of the monthly mean kPAR produces an SST decrease of up to 0.8°C and a MLD increase of up to only 4-5 m for climatological surface forcing, with this primarily confined to the equatorial regions. Remarkably, a constant kPAR value of 0.06 m-1, which is indicative of optically clear open ocean conditions, is found to serve very well for OGCM prediction of SST and MLD over most of the global ocean.

  15. Effect of the Barrier Layer on the Upper Ocean Response to MJO Forcing

    NASA Astrophysics Data System (ADS)

    Bulusu, S.

    2014-12-01

    Recently, attention has been given to an upper ocean feature known as the Barrier Layer, which has been shown to impact meteorological phenomena from ENSO to tropical cyclones by suppressing vertical mixing, which reduces sea surface cooling and enhances surface heat fluxes. The calculation defines the Barrier Layer as the difference between the Isothermal Layer Depth (ILD) and Mixed Layer Depth (MLD). Proper representation of these features relies on precise observations of SSS to attain accurate measurements of the MLD and subsequently, the BLT. Compared to the many available in situ SSS measurements, the NASA Aquarius salinity mission currently obtains the closest observations to the true SSS. The role of subsurface features will be better understood through increased accuracy of SSS measurements. In this study BLT estimates are derived from satellite measurements using a multilinear regression model (MRM) in the Indian Ocean. The MRM relates BLT to satellite derived SSS, sea surface temperature (SST) and sea surface height anomalies (SSHA). Besides being a variable that responds passively to atmospheric conditions, SSS significantly controls upper ocean density and therefore the MLD. The formation of a Barrier Layer can lead to possible feedbacks that impact the atmospheric component of the Madden-Julian Oscillation (MJO), as stated as one of the three major hypotheses of the DYNAMO field campaign. This layer produces a stable stratification, reducing vertical mixing, which influences surface heat fluxes and thus could possibly impact atmospheric conditions during the MJO. Establishing the magnitude and extent of SSS variations during the MJO will be a useful tool for data assimilation into models to correctly represent both oceanic thermodynamic characteristics and atmospheric processes during intraseasonal variations.

  16. Numerical Investigations of Wave-Induced Mixing in Upper Ocean Layer

    NASA Astrophysics Data System (ADS)

    Guan, Changlong

    2017-04-01

    The upper ocean layer is playing an important role in ocean-atmosphere interaction. The typical characteristics depicting the upper ocean layer are the sea surface temperature (SST) and the mixed layer depth (MLD). So far, the existing ocean models tend to over-estimate SST and to under-estimate MLD, due to the inadequate mixing in the mixing layer, which is owing to that several processes related mixing in physics are ignored in these ocean models. The mixing induced by surface gravity wave is expected to be able to enhance the mixing in the upper ocean layer, and therefore the over-estimation of SST and the under-estimate of MLD could be improved by including wave-induced mixing. The wave-induced mixing could be accomplished by the physical mechanisms, such as wave breaking (WB), wave-induced Reynolds stress (WR), and wave-turbulence interaction (WT). The General Ocean Turbulence Model (GOTM) is employed to investigate the effects of the three mechanisms concerning wave-induced mixing. The numerical investigation is carried out for three turbulence closure schemes, say, k-epsilon, k-omega and Mellor-Yamada (1982), with the observational data from OSC Papa station and wave data from ECMWF. The mixing enhancement by various waved-induced mixing mechanisms is investigated and verified.

  17. Upper Water Structure and Mixed Layer Depth in Sub-Tropical Waters: The Seats Station in the Northern South China Sea

    NASA Astrophysics Data System (ADS)

    Wong, G. T. F.; Tai, J. H.

    2014-12-01

    702 CTD profiles were collected in the subtropical northern South China Sea at and in the vicinity of the SouthEast Asian Time-series Study (SEATS) station (18.2oN, 115.8oE) between 17.5 and 18.5oN and 115.3 and 116.3oE in 64 cruises in 1997 to 2013. The hydrographic structure of the upper water above the permanent thermocline may be classified into 4 principal types: (a) classic type (an almost isopycnic upper water); (b) stepwise type (with one or more small but significant step-increases in σθ in the upper water); (c) graded type (an approximately constant depth gradient in a monotonic increase in σθ in the upper water); and (d) mixed type (a combination of the stepwise and graded types). The 4 types of upper water were found in 75, 14, 5, and 6% of the cruises, respectively. Ten schemes were applied to these data to determine the mixed layer depth (MLD): 4 fixed temperature difference (FTD) methods (0.2, 0.5, 0.8 and 1.0oC decrease from 10 m); 1 fixed density difference (FDD) method (0.125 σθ increase from 10 m); 1 fixed temperature gradient (FTG) method (at 0.05oC/m); 3 fixed density gradient (FDG) methods (at 0.01, 0.05 and 0.1 σθ/m); and the maximum density gradient (MDG) method. MLD could not be clearly depicted in the 3 minor types of upper water. In the classical type, while similar MLD-s were found in a large majority of the cruises among all 10 methods, substantial discrepancies among methods could be found. The most consistent results, generally within ±5 m, were found among the FDG method at 0.05, 0.1 σθ/m and FTD method at 0.8 and 1.0oC. The MDG method gave consistently deeper MLD by ~8 m. If that difference was taken into account, the results were generally consistent with those from the other 4 methods. The remaining 5 methods could all yield MLD-s shallower than the first 4 methods by >10 m as they failed to capture the bottom of the mixed layer as indicated by visual inspection.

  18. Modelling study of sea breezes in a complex coastal environment

    NASA Astrophysics Data System (ADS)

    Cai, X.-M.; Steyn, D. G.

    This study investigates a mesoscale modelling of sea breezes blowing from a narrow strait into the lower Fraser valley (LFV), British Columbia, Canada, during the period of 17-20 July, 1985. Without a nudging scheme in the inner grid, the CSU-RAMS model produces satisfactory wind and temperature fields during the daytime. In comparison with observation, the agreement indices for surface wind and temperature during daytime reach about 0.6 and 0.95, respectively, while the agreement indices drop to 0.4 at night. In the vertical, profiles of modelled wind and temperature generally agree with tethersonde data collected on 17 and 19 July. The study demonstrates that in late afternoon, the model does not capture the advection of an elevated warm layer which originated from land surfaces outside of the inner grid. Mixed layer depth (MLD) is calculated from model output of turbulent kinetic energy field. Comparison of MLD results with observation shows that the method generates a reliable MLD during the daytime, and that accurate estimates of MLD near the coast require the correct simulation of wind conditions over the sea. The study has shown that for a complex coast environment like the LFV, a reliable modelling study depends not only on local surface fluxes but also on elevated layers transported from remote land surfaces. This dependence is especially important when local forcings are weak, for example, during late afternoon and at night.

  19. The sensitivity of primary productivity to intra-seasonal mixed layer variability in the sub-Antarctic Zone of the Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Joubert, W. R.; Swart, S.; Tagliabue, A.; Thomalla, S. J.; Monteiro, P. M. S.

    2014-03-01

    The seasonal cycle of primary productivity is impacted by seasonal and intra-seasonal dynamics of the mixed layer through the changing balance between mixing and buoyancy forcing, which regulates nutrient supply and light availability. Of particular recent interest is the role of synoptic scale events in supplying nutrients, particularly iron, to the euphotic zone in the Sub Antarctic Zone (SAZ), where phytoplankton blooms occur throughout summer. In this study, we present high resolution measurements of net community production (NCP) constrained by ΔO2/Ar ratios, and mixed layer depth (MLD) in the Atlantic SAZ. We found a non-linear relationship between NCP and MLD, with the highest and most variable NCP observed in shallow MLDs (< 45 m). We propose that NCP variability in the SAZ may be driven by alternating states of synoptic-scale deepening of the mixed layer, leading to the entrainment of iron (dFe), followed by restratification, allowing rapid growth in an iron replete, high light environment. Synoptic iron fluxes into the euphotic zone based on water column dFe profiles and high resolution glider MLD data, reveal a potentially significant contribution of "new iron" which could sustain NCP throughout summer. Future process studies will help elaborate these findings further.

  20. Characterization of nano-porosity in molecular layer deposited films.

    PubMed

    Perrotta, Alberto; Poodt, Paul; van den Bruele, F J Fieke; Kessels, W M M Erwin; Creatore, Mariadriana

    2018-06-12

    Molecular layer deposition (MLD) delivers (ultra-) thin organic and hybrid materials, with atomic-level thickness control. However, such layers are often reported to be unstable under ambient conditions, due to the interaction of water and oxygen with the hybrid structure, consequently limiting their applications. In this contribution, we investigate the impact of porosity in MLD layers on their degradation. Alucone layers were deposited by means of trimethylaluminium and ethylene glycol, adopting both temporal and spatial MLD and characterized by means of FT-IR spectroscopy, spectroscopic ellipsometry, and ellipsometric porosimetry. The highest growth per cycle (GPC) achieved by spatial MLD resulted in alucone layers with very low stability in ambient air, leading to their conversion to AlOx. Alucones deposited by means of temporal MLD, instead, showed a lower GPC and a higher ambient stability. Ellipsometric porosimetry showed the presence of open nano-porosity in pristine alucone layers. Pores with a diameter in the range of 0.42-2 nm were probed, with a relative content between 1.5% and 5%, respectively, which are attributed to the temporal and spatial MLD layers. We concluded that a correlation exists between the process GPC, the open-porosity relative content, and the degradation of alucone layers.

  1. Quantifying the processes controlling intraseasonal mixed-layer temperature variability in the tropical Indian Ocean

    NASA Astrophysics Data System (ADS)

    Halkides, D. J.; Waliser, Duane E.; Lee, Tong; Menemenlis, Dimitris; Guan, Bin

    2015-02-01

    Spatial and temporal variation of processes that determine ocean mixed-layer (ML) temperature (MLT) variability on the timescale of the Madden-Julian Oscillation (MJO) in the Tropical Indian Ocean (TIO) are examined in a heat-conserving ocean state estimate for years 1993-2011. We introduce a new metric for representing spatial variability of the relative importance of processes. In general, horizontal advection is most important at the Equator. Subsurface processes and surface heat flux are more important away from the Equator, with surface heat flux being the more dominant factor. Analyses at key sites are discussed in the context of local dynamics and literature. At 0°, 80.5°E, for MLT events > 2 standard deviations, ocean dynamics account for more than two thirds of the net tendency during cooling and warming phases. Zonal advection alone accounts for ˜40% of the net tendency. Moderate events (1-2 standard deviations) show more differences between events, and some are dominated by surface heat flux. At 8°S, 67°E in the Seychelles-Chagos Thermocline Ridge (SCTR) area, surface heat flux accounts for ˜70% of the tendency during strong cooling and warming phases; subsurface processes linked to ML depth (MLD) deepening (shoaling) during cooling (warming) account for ˜30%. MLT is more sensitive to subsurface processes in the SCTR, due to the thin MLD, thin barrier layer and raised thermocline. Results for 8°S, 67°E support assertions by Vialard et al. (2008) not previously confirmed due to measurement error that prevented budget closure and the small number of events studied. The roles of MLD, barrier layer thickness, and thermocline depth on different timescales are examined.

  2. Insights Into Layering in the Cratonic Lithosphere Beneath Western Australia

    NASA Astrophysics Data System (ADS)

    Sun, Weijia; Fu, Li-Yun; Saygin, Erdinc; Zhao, Liang

    2018-02-01

    The characteristics of internal lithospheric discontinuities carry crucial information regarding the origin and evolution of the lithosphere. However, the formation and mechanisms of the midlithosphere discontinuity (MLD) are still enigmatic and controversial. We investigate the midlithospheric discontinuities beneath the Archean Western Australian Craton, which represents one of the oldest continents on the globe, using a novel receiver-based reflectivity approach combined with other geophysical information comprising tomographic P and S wave velocity, radial anisotropy, electrical resistivity, and heat flow data. The MLD is rather shallow with a depth of 68-82 km. Multiple prominent discontinuities are observed in the lithospheric mantle using constructed high-frequency (0.5-4 Hz) P wave reflectivities. These multiple discontinuities coincide well with the broad-scale reduction of relative P and SV wave velocities at the top of the graded transition zone from the lithosphere to the asthenosphere. Strong radial anisotropy in the upper lithosphere mantle tends to be weak across the MLD, which might reflect quasi-laminar lithospheric heterogeneity behavior with a horizontal correlation length that is greater than its vertical correlation length. Broad-scale electrical resistivity variations show little coherence with the MLD. Given these various geophysical observations, the upper lithosphere exhibits rigid and elastic properties above the MLD, while the lower lithosphere tends to be ductile and rheological or viscous. A model comprising quasi-laminar lithospheric heterogeneity could effectively represent the MLD characteristics beneath the Archean continent.

  3. Seasonal Variation of Barrier Layer in the Southern Ocean

    NASA Astrophysics Data System (ADS)

    Pan, Li; Zhong, Yisen; Liu, Hailong; Zhou, Lei; Zhang, Zhaoru; Zhou, Meng

    2018-03-01

    The seasonal variability of barrier layer (BL) and its formation mechanism in the Southern Ocean are investigated using the most recent Argo data. The results reveal that the BL is a persistent feature in the Southern Ocean with a strong seasonal cycle. The thickest BL appears in winter with the maximum amplitude exceeding 250 m while it dramatically decreases to less than 50 m in summer. The spatial distribution of BL is zonally oriented in the Pacific and Indian Ocean sectors, which is in agreement with that of the mixed layer depth (MLD) and the isothermal layer depth (ILD). Two areas with the most prominent BL are identified. One is located south of Australia and the other in the southeastern Pacific. The BL formation in both areas is generally attributed to a shallow mixed layer controlled by surface freshwater intrusion and a deep isothermal layer modulated by seasonal vertical convection. In the former region, the cold and fresh Antarctic Surface Water (ASW) is transported northward across the Subantarctic Front (SAF) by the Ekman effect and overlies the warm Subantarctic Mode Water (SAMW). The resulting inverse temperature structure facilitates the development of thick BLs. In the latter region, the BL emerges in the ventilation area where the shallow Surface Salinity Minimum Water (SSMW) coming from north leans against the deep vertical isotherms. In summer, positive surface heat flux into the ocean overwhelms other thermodynamic effects in the mixed layer heat budget. The MLD and ILD coincide and thus the BL is destroyed.

  4. Lithospheric Layering beneath Southern Africa Constrained by S-to-P Receiver Functions

    NASA Astrophysics Data System (ADS)

    Liu, L.; Liu, K. H.; Gao, S. S.

    2016-12-01

    To investigate the existence of intra-lithospheric interfaces in an area of active rifting of ancient lithosphere, we stack S-to-P receiver functions (SRFs) recorded by broadband seismic stations in the vicinity of the non-volcanic sections of the East African Rift System and the stable Kaapvaal and Zimbabwe cratons. The data set was recorded by about 200 permanent and portable seismic stations installed over the past 30 years. The SRFs are computed using frequency-domain deconvolution, and are stacked in consecutive circles with a radius of 2 degrees. They are converted to depth series after moveout corrections using the IASP91 Earth model. In the upper mantle , a robust negative arrival is found in virtually all the stacked traces in the depth range of 50-100 km. Comparison with results from seismic tomography and mantle xenolith studies suggests that this discontinuity represents a mid-lithospheric discontinuity (MLD), similar to what was observed beneath the North American continent. The absence of observable negative arrivals in the anticipated depth of 250 km or greater beneath the study area suggests a gradual instead of sharp transition from the lithosphere to the asthenosphere. No significant shallowing of the MLD is observed beneath the young rift segments, suggesting that rifting is limited in the crust, an observation that is consistent with recent results from the SAFARI (Seismic Arrays for African Rift Initiation) project. The shallowest MLD of about 65 km in the study area is found in a NW-SE trending zone across central Zimbabwe and western Zambia. The MLD may reflect a low velocity zone caused by metasomatism, a process commonly found beneath ancient cratons.

  5. Molecular Layer Deposition for Surface Modification of Lithium-Ion Battery Electrodes

    DOE PAGES

    Ban, Chunmei; George, Steven M.

    2016-10-21

    This review presents the MLD process and its outstanding attributes for electrochemical applications and is inspired by recent successes in applying molecular layer deposition (MLD) to stabilize lithium-ion (Li-ion) electrodes. Furthermore, this review discusses various MLD materials and their implementation in Li-ion electrodes. The rationale behind these emerging uses of MLD is examined to motivate future efforts on the fundamental understanding of interphase chemistry and the development of new materials for enhanced electrochemical performance.

  6. Seasonal surface circulation, temperature, and salinity in Prince William Sound, Alaska

    NASA Astrophysics Data System (ADS)

    Musgrave, David L.; Halverson, Mark J.; Scott Pegau, W.

    2013-02-01

    Salinity, temperature, and depth profiles from 1973 to 2010 were used to construct a seasonal climatology of surface temperature, surface salinity, mixed layer depth (MLD), potential energy of mixing, and surface geostrophic circulation in Prince William Sound (PWS) and the adjacent Gulf of Alaska. Surface salinity is greatest in winter and least in summer due to the influence of increased freshwater runoff in summer. It is generally lowest in the northwest and highest in the Gulf of Alaska. The surface temperature is lowest in the winter and highest in the summer when surface heating is greatest, with little spatial variability across the Sound. The MLD is deepest in winter (9-27 m) and shallowest in summer (4-5 m). The work by winds was estimated from meteorological buoy data in central PWS and compared to the potential energy of mixing of the upper water column. The potential depth to which winds mix the upper water column was generally consistent with the MLD. The surface geostrophic circulation in the central Sound has: a southerly flow in the western central Sound in the winter; a closed, weak anticyclonic cell in spring; a closed, cyclonic cell in the summer; an open, cyclonic circulation in the fall. In the western passages, a southerly flow occurs in spring, summer, and fall. These results have important implications for oil spill response in PWS, the use of oil dispersants, and for comparison to numerical studies.

  7. Organic and inorganic–organic thin film structures by molecular layer deposition: A review

    PubMed Central

    Sundberg, Pia

    2014-01-01

    Summary The possibility to deposit purely organic and hybrid inorganic–organic materials in a way parallel to the state-of-the-art gas-phase deposition method of inorganic thin films, i.e., atomic layer deposition (ALD), is currently experiencing a strongly growing interest. Like ALD in case of the inorganics, the emerging molecular layer deposition (MLD) technique for organic constituents can be employed to fabricate high-quality thin films and coatings with thickness and composition control on the molecular scale, even on complex three-dimensional structures. Moreover, by combining the two techniques, ALD and MLD, fundamentally new types of inorganic–organic hybrid materials can be produced. In this review article, we first describe the basic concepts regarding the MLD and ALD/MLD processes, followed by a comprehensive review of the various precursors and precursor pairs so far employed in these processes. Finally, we discuss the first proof-of-concept experiments in which the newly developed MLD and ALD/MLD processes are exploited to fabricate novel multilayer and nanostructure architectures by combining different inorganic, organic and hybrid material layers into on-demand designed mixtures, superlattices and nanolaminates, and employing new innovative nanotemplates or post-deposition treatments to, e.g., selectively decompose parts of the structure. Such layer-engineered and/or nanostructured hybrid materials with exciting combinations of functional properties hold great promise for high-end technological applications. PMID:25161845

  8. High Winds and the Vertical Structure of Chl-a in the Southern Ocean: Insights from Remote Sensing and Novel in situ Sensors

    NASA Astrophysics Data System (ADS)

    Carranza, M. M.; Gille, S. T.; Franks, P. J. S.; Johnson, K. S.; Girton, J. B.

    2016-02-01

    The Southern Ocean is under the influence of strong atmospheric synoptic activity and contains some of the oceans deepest mixed layers. Deep mixed layers can transport phytoplankton below the euphotic zone, and phytoplankton growth is hypothesized to be co-limited by iron and light. Atmospheric forcing drives changes in the mixed-layer depth (MLD) that influence light levels and nutrient input to the euphotic zone. In summer, when the MLD is shallow and close to the euphotic depth, high satellite Chl-a correlate with high winds, consistent with wind-driven entrainment that can potentially increase nutrient concentrations in the euphotic zone. However, correlations between Chl-a and diurnal winds are largest at zero time lag. High winds can inject nutrients on short timescales (< 1 day), but in situ incubation experiments after iron addition indicate phytoplankton growth on slightly longer timescales (> 3-4 days), suggesting that the correlations are not a result of growth. High winds can also entrain Chl-a from a subsurface Chl-a maximum. Novel bio-optical sensors mounted on elephant seals and autonomous floats allow us to examine the vertical structure of Chl-a in the Southern Ocean. In this study, we investigate the occurrence of subsurface Chl-a maxima. We find that surface Chl-a is a relatively good proxy for depth-integrated Chl-a within the euphotic zone but gives an inadequate representation of biomass within the mixed layer, particularly in the summer. Subsurface Chl-a maxima are not uncommon and may occur in all seasons. Chl-a maxima that correlate with particle backscattering in summer and fall are found near the base of the mixed layer, closer to the nutrient maximum than the light maximum, suggesting that nutrient limitation (i.e., essentially iron) can play a greater role than light limitation in governing productivity, and that high winds potentially entrain a subsurface Chl-a maximum into the summer mixed layer.

  9. On the response of subduction in the South Pacific to an intensification of westerlies and heat flux in an eddy permitting ocean model

    NASA Astrophysics Data System (ADS)

    Liu, Chengyan; Wang, Zhaomin; Li, Bingrui; Cheng, Chen; Xia, Ruibin

    2017-04-01

    Based on an eddy permitting ocean general circulation model, the response of water masses to two distinct climate scenarios in the South Pacific is assessed in this paper. Under annually repeating atmospheric forcing that is characterized by different westerlies and associated heat flux, the response of Subantarctic Mode Water (SAMW) and Antarctic Intermediate Water (AAIW) is quantitatively estimated. Both SAMW and AAIW are found to be warmer, saltier and denser under intensified westerlies and increased heat loss. The increase in the subduction volume of SAMW and AAIW is about 19.8 Sv (1 Sv = 106 m3 s-1). The lateral induction term plays a dominant role in the changes in the subduction volume due to the deepening of the mixed layer depth (MLD). Furthermore, analysis of the buoyancy budget is used to quantitatively diagnose the reason for the changes in the MLD. The deepening of the MLD is found to be primarily caused by the strengthening of heat loss from the ocean to the atmosphere in the formation region of SAMW and AAIW.

  10. Sea surface cooling in the Northern South China Sea observed using Chinese Sea-wing Underwater Glider measurements

    NASA Astrophysics Data System (ADS)

    Qiu, C.; Mao, H.; Wu, J.

    2016-02-01

    Based on 26 days of Chinese Seawing underwater Glider measurements and satellite microwave data, we documented cooling of the upper mixed layer of the ocean in response to changes in the wind in the Northern South China Sea (NSCS) from September 19, 2014, to October 15, 2014. The Seawing underwater glider measured 177 profiles of temperature, salinity, and pressure within a 55 km נ55 km area, and reached a depth of 1000 m at a temporal resolution of 4 h. The study area experienced two cooling events, Cooling I and Cooling II, according to their timing. During Cooling I, water temperature at 1m depth (T1) decreased by 1.0°C, and the corresponding satellitederived surface winds increased locally by 4.2 m/s. During Cooling II, T1 decreased sharply by 1.7°C within a period of 4 days; sea surface winds increased by 7 m/s and covered the entire NSCS. The corresponding mixed layer depth (MLD) deepened sharply from 30 m to 60 m during Cooling II, and remained steady during Cooling I. We estimated temperature tendencies using a ML model. High resolution Seawing underwater glider measurements provided an estimation of MLD migration, allowing us to obtain the temporal entrainment rate of cool sub thermocline water. Quantitative analysis confirmed that the entrainment rate and latent heat flux were the two major components that regulated cooling of the ML, and that the Ekman advection and sensible heat flux were small.

  11. Thermal classification of lithospheric discontinuities beneath USArray

    NASA Astrophysics Data System (ADS)

    Hansen, Steven M.; Dueker, Ken; Schmandt, Brandon

    2015-12-01

    Broadband seismic data from the United States were processed into Ps and Sp receiver function image volumes for the purpose of constraining negative velocity gradients (NVG) at depths between the Moho and 200 km. Moho depth picks from the two independent datasets are in good agreement, however, large discrepancies in NVG picks occur and are attributed to free-surface multiples which obscure deep NVG arrivals in the Ps data. From the Sp data, shallow NVG are found west of the Rockies and in the central US while deep and sporadic NVG are observed beneath the Great Plains and northern Rockies. To aid the interpretation of the observed NVG arrivals, the mantle thermal field is estimated by mapping surface wave tomography velocities to temperature assuming an anelastic olivine model. The distribution of temperature versus NVG depth is bi-modal and displays two distinct thermal populations that are interpreted to represent both the lithosphere-asthenosphere boundary (LAB) and mid-lithosphere discontinuities (MLD). LAB arrivals occur in the western US at 60-85 km and 1200-1400 °C depth suggesting that they manifest partial melt near the base of the thermal plate. MLD arrivals primarily occur at 70-110 km depth and 700-900 °C and we hypothesize that these arrivals are caused by a low-velocity metasomatic layer containing phlogopite resulting from magma crystallization products that accumulate within long-lived thick lithosphere.

  12. Interannual and seasonal variability of winter-spring cohort of neon flying squid abundance in the Northwest Pacific Ocean during 1995-2011

    NASA Astrophysics Data System (ADS)

    Yu, Wei; Chen, Xinjun; Yi, Qian

    2016-06-01

    The neon flying squid, Ommastrephes bartramii, is a species of economically important cephalopod in the Northwest Pacific Ocean. Its short lifespan increases the susceptibility of the distribution and abundance to the direct impact of the environmental conditions. Based on the generalized linear model (GLM) and generalized additive model (GAM), the commercial fishery data from the Chinese squid-jigging fleets during 1995 to 2011 were used to examine the interannual and seasonal variability in the abundance of O. bartramii, and to evaluate the influences of variables on the abundance (catch per unit effort, CPUE). The results from GLM suggested that year, month, latitude, sea surface temperature (SST), mixed layer depth (MLD), and the interaction term ( SST×MLD) were significant factors. The optimal model based on GAM included all the six significant variables and could explain 42.43% of the variance in nominal CPUE. The importance of the six variables was ranked by decreasing magnitude: year, month, latitude, SST, MLD and SST×MLD. The squid was mainly distributed in the waters between 40°N and 44°N in the Northwest Pacific Ocean. The optimal ranges of SST and MLD were from 14 to 20°C and from 10 to 30 m, respectively. The squid abundance greatly fluctuated from 1995 to 2011. The CPUE was low during 1995-2002 and high during 2003-2008. Furthermore, the squid abundance was typically high in August. The interannual and seasonal variabilities in the squid abundance were associated with the variations of marine environmental conditions and the life history characteristics of squid.

  13. 18-year variability of ultraviolet radiation penetration in the mid-latitude coastal waters of the western boundary Pacific

    NASA Astrophysics Data System (ADS)

    Kuwahara, Victor S.; Nozaki, Sena; Nakano, Junji; Toda, Tatsuki; Kikuchi, Tomohiko; Taguchi, Satoru

    2015-07-01

    The 18-year time-series shows in situ ultraviolet radiation (UVR) and photosynthetically active radiation (PAR) diffuse attenuation coefficient Kd(λ) have recurrent seasonal variability of high/low attenuation during summer/winter months, respectively, dependent on variability in water column stratification and concentrations of bio-optical properties. The mid-latitude coastal survey station displayed significant seasonality of the mixed layer depth (MLD) between 12 and 82 m which modified the distribution of chlorophyll a (4.6-24.9 mg m-2) and absorption of colored dissolved organic matter [aCDOM(320 nm) 0.043-1.34 m-1]. The median Kd(320 nm) displayed significant seasonality at 0.19-0.74 m-1 (C.V. = 44.1%) and seasonal variability within the euphotic layer [Z10%(320 nm) = 7-20%]. High attenuation of UVR with relatively moderate attenuation of PAR was consistently observed during the summer months when increased concentrations of terrestrially derived CDOM coupled with a shallow MLD were present. The winter season showed the opposite of low UVR and PAR attenuation due to a relatively deeper MLD coupled with low concentrations of bio-optical properties. Although the long term Kd(λ) did not vary significantly during the time-series, analysis of the interannual variability suggests there are positive and negative phases following the Pacific Decadal Oscillation (PDO) vis-a-vis variability in bio-optical properties (p < 0.001).

  14. Sea surface cooling in the Northern South China Sea observed using Chinese sea-wing underwater glider measurements

    NASA Astrophysics Data System (ADS)

    Qiu, Chunhua; Mao, Huabin; Yu, Jiancheng; Xie, Qiang; Wu, Jiaxue; Lian, Shumin; Liu, Qinyan

    2015-11-01

    Based on 26 days of Chinese Sea-wing underwater glider measurements and satellite microwave data, we documented cooling of the upper mixed layer of the ocean in response to changes in the wind in the Northern South China Sea (NSCS) from September 19, 2014, to October 15, 2014. The Sea-wing underwater glider measured 177 profiles of temperature, salinity, and pressure within a 55 km×55 km area, and reached a depth of 1000 m at a temporal resolution of ∼4 h. The study area experienced two cooling events, Cooling I and Cooling II, according to their timing. During Cooling I, water temperature at 1-m depth (T1) decreased by ∼1.0 °C, and the corresponding satellite-derived surface winds increased locally by 4.2 m/s. During Cooling II, T1 decreased sharply by 1.7 °C within a period of 4 days; sea surface winds increased by 7 m/s and covered the entire NSCS. The corresponding mixed layer depth (MLD) deepened sharply from 30 m to 60 m during Cooling II, and remained steady during Cooling I. We estimated temperature tendencies using a ML model. High resolution Sea-wing underwater glider measurements provided an estimation of MLD migration, allowing us to obtain the temporal entrainment rate of cool sub-thermocline water. Quantitative analysis confirmed that the entrainment rate and latent heat flux were the two major components that regulated cooling of the ML, and that the Ekman advection and sensible heat flux were small.

  15. Delineation of marine ecosystem zones in the northern Arabian Sea during winter

    NASA Astrophysics Data System (ADS)

    Shalin, Saleem; Samuelsen, Annette; Korosov, Anton; Menon, Nandini; Backeberg, Björn C.; Pettersson, Lasse H.

    2018-03-01

    The spatial and temporal variability of marine autotrophic abundance, expressed as chlorophyll concentration, is monitored from space and used to delineate the surface signature of marine ecosystem zones with distinct optical characteristics. An objective zoning method is presented and applied to satellite-derived Chlorophyll a (Chl a) data from the northern Arabian Sea (50-75° E and 15-30° N) during the winter months (November-March). Principal component analysis (PCA) and cluster analysis (CA) were used to statistically delineate the Chl a into zones with similar surface distribution patterns and temporal variability. The PCA identifies principal components of variability and the CA splits these into zones based on similar characteristics. Based on the temporal variability of the Chl a pattern within the study area, the statistical clustering revealed six distinct ecological zones. The obtained zones are related to the Longhurst provinces to evaluate how these compared to established ecological provinces. The Chl a variability within each zone was then compared with the variability of oceanic and atmospheric properties viz. mixed-layer depth (MLD), wind speed, sea-surface temperature (SST), photosynthetically active radiation (PAR), nitrate and dust optical thickness (DOT) as an indication of atmospheric input of iron to the ocean. The analysis showed that in all zones, peak values of Chl a coincided with low SST and deep MLD. The rate of decrease in SST and the deepening of MLD are observed to trigger the algae bloom events in the first four zones. Lagged cross-correlation analysis shows that peak Chl a follows peak MLD and SST minima. The MLD time lag is shorter than the SST lag by 8 days, indicating that the cool surface conditions might have enhanced mixing, leading to increased primary production in the study area. An analysis of monthly climatological nitrate values showed increased concentrations associated with the deepening of the mixed layer. The input of iron seems to be important in both the open-ocean and coastal areas of the northern and north-western parts of the northern Arabian Sea, where the seasonal variability of the Chl a pattern closely follows the variability of iron deposition.

  16. Trapping of Momentum due to Low Salinity Water in the north Bay of Bengal

    NASA Astrophysics Data System (ADS)

    Chaudhuri, D.; Tandon, A.; Farrar, T.; Weller, R. A.; Venkatesan, R.; S, S.; MacKinnon, J. A.; D'Asaro, E. A.; Sengupta, D.

    2016-02-01

    We study the relation between near-surface ocean stratification and upper ocean currents (momentum) during the diurnal cycle and subseasonal "active-break cycle" of the summer monsoon in the north Bay of Bengal. We use time series of hourly observations from NIOT moorings BD08, BD09 and an INCOIS mooring near 18 N, 89 E in 2013, and data collected during two research cruises of ORV Sagar Nidhi in August-September 2014 and 2015. Our analyses are based on upper ocean profiles of temperature, salinity and density (from moorings and a shipborne underway conductivity-temperature-depth profiler), velocity (Acoustic Doppler Current Profiler), and surface forcing (meterology sensors on moored buoy and ship). Monsoon breaks are characterized by low rainfall, low wind speed (0-5 m/s) and high incident shortwave radiation, whereas active phases are marked by intense rainfall, high wind speed (8-16 m/s) and low incident sunlight. Our main findings are: (i) Net surface heat flux is positive (ocean gains heat) during break spells, and sea surface temperature (SST) rises by upto 1.5 C in 1-2 weeks. (ii) During breaks, day-night SST difference can reach 1.5C; mixed layer depth (MLD) shoals to 5m during day time, and deepens to 15-20 m by late night/early morning. (iii) During active spells, SST cools on subseasonal scales; MLD is deep (exceeding 20 m), and diurnal re-stratification is weak or absent. (iv) Once very low-salinity water (<30 psu) from rivers arrives at the moorings in late August, MLD remains shallow, and is insensitive to subseasonal changes in surface forcing. (v) Moored data and high-resolution observations from the summer 2014 and 2015 cruises reveal trapping of momentum from winds in a relatively thin surface layer when surface salinity is low and the shallow stratification is strong. Results of ingoing analyses will be presented at the meeting.

  17. Origins of cratonic mantle discontinuities: A view from petrology, geochemistry and thermodynamic models

    NASA Astrophysics Data System (ADS)

    Aulbach, Sonja; Massuyeau, Malcolm; Gaillard, Fabrice

    2017-01-01

    Geophysically detectible mid-lithospheric discontinuities (MLD) and lithosphere-asthenosphere boundaries (LAB) beneath cratons have received much attention over recent years, but a consensus on their origin has not yet emerged. Cratonic lithosphere composition and origin is peculiar due to its ultra-depletion during plume or accretionary tectonics, cool present-day geothermal gradients, compositional and rheological stratification and multiple metasomatic overprints. Bearing this in mind, we integrate current knowledge on the physical properties, chemical composition, mineralogy and fabric of cratonic mantle with experimental and thermodynamic constraints on the formation and migration of melts, both below and within cratonic lithosphere, in order to find petrologically viable explanations for cratonic mantle discontinuities. LABs characterised by strong seismic velocity gradients and increased conductivity require the presence of melts, which can form beneath intact cratonic roots reaching to 200-250 km depth only in exceptionally warm and/or volatile-rich mantle, thus explaining the paucity of seismical LAB observations beneath cratons. When present, pervasive interaction of these - typically carbonated - melts with the deep lithosphere leads to densification and thermochemical erosion, which generates topography at the LAB and results in intermittent seismic LAB signals or conflicting seismic, petrologic and thermal LAB depths. In rare cases (e.g. Tanzanian craton), the tops of live melt percolation fronts may appear as MLDs and, after complete lithosphere rejuvenation, may be sites of future, shallower LABs (e.g. North China craton). Since intact cratons are presently tectonomagmatically quiescent, and since MLDs produce both positive and negative velocity gradients, in some cases with anisotropy, most MLDs may be best explained by accumulations (metasomes) of seismically slow minerals (pyroxenes, phlogopite, amphibole, carbonates) deposited during past magmatic-metasomatic activity, or fabric inherited from cratonisation. They may accumulate as layers at, or as subvertical veins above, the depth at which melt flow transitions from pervasive to focussed flow at the mechanical boundary layer, causing azimuthal and radial anisotropy. Thermodynamic calculations investigating the depth range in which small-volume melts can be produced relative to the field of phlogopite stability and the presence of MLDs show that phlogopite precipitates at various pressures as a function of age-dependent thermal state of the cratonic mantle, thus explaining variable MLD depths. Even if not directly observed, such metasomes have been shown to be important ingredients in small-volume volatile-rich melts typically penetrating cratonic lithospheres. The apparent sparseness of evidence for phlogopite-rich assemblages in the mantle xenolith record at geophysically imaged MLD depths, if not due to preferential disaggregation in the kimberlite or alteration, may relate to vagaries of both kimberlite and human sampling.

  18. Can we map the interannual variability of the whole upper Southern Ocean with the current database of hydrographic observations?

    NASA Astrophysics Data System (ADS)

    Heuzé, C.; Vivier, F.; Le Sommer, J.; Molines, J.-M.; Penduff, T.

    2015-12-01

    With the advent of Argo floats, it now seems feasible to study the interannual variations of upper ocean hydrographic properties of the historically undersampled Southern Ocean. To do so, scattered hydrographic profiles often first need to be mapped. To investigate biases and errors associated both with the limited space-time distribution of the profiles and with the mapping methods, we colocate the mixed-layer depth (MLD) output from a state-of-the-art 1/12° DRAKKAR simulation onto the latitude, longitude, and date of actual in situ profiles from 2005 to 2014. We compare the results obtained after remapping using a nearest neighbor (NN) interpolation and an objective analysis (OA) with different spatiotemporal grid resolutions and decorrelation scales. NN is improved with a coarser resolution. OA performs best with low decorrelation scales, avoiding too strong a smoothing, but returns values over larger areas with large decorrelation scales and low temporal resolution, as more points are available. For all resolutions OA represents better the annual extreme values than NN. Both methods underestimate the seasonal cycle in MLD. MLD biases are lower than 10 m on average but can exceed 250 m locally in winter. We argue that current Argo data should not be mapped to infer decadal trends in MLD, as all methods are unable to reproduce existing trends without creating unrealistic extra ones. We also show that regions of the subtropical Atlantic, Indian, and Pacific Oceans, and the whole ice-covered Southern Ocean, still cannot be mapped even by the best method because of the lack of observational data.

  19. DOE Office of Scientific and Technical Information (OSTI.GOV)

    He, Yang; Piper, Daniela M.; Gu, Meng

    Surface modification of silicon nanoparticle via molecular layer deposition (MLD) has been recently proved to be an effective way for dramatically enhancing the cyclic performance in lithium ion batteries. However, the fundamental mechanism as how this thin layer of coating function is not known, which is even complicated by the inevitable presence of native oxide of several nanometers on the silicon nanoparticle. Using in-situ TEM, we probed in detail the structural and chemical evolution of both uncoated and coated silicon particles upon cyclic lithiation/delithation. We discovered that upon initial lithiation, the native oxide layer converts to crystalline Li2O islands, whichmore » essentially increases the impedance on the particle, resulting in ineffective lithiation/delithiation, and therefore low coulombic efficiency. In contrast, the alucone MLD coated particles show extremely fast, thorough and highly reversible lithiation behaviors, which are clarified to be associated with the mechanical flexibility and fast Li+/e- conductivity of the alucone coating. Surprisingly, the alucone MLD coating process chemically changes the silicon surface, essentially removing the native oxide layer and therefore mitigates side reaction and detrimental effects of the native oxide. This study provides a vivid picture of how the MLD coating works to enhance the coulombic efficiency and preserve capacity and clarifies the role of the native oxide on silicon nanoparticles during cyclic lithiation and delithiation. More broadly, this work also demonstrated that the effect of the subtle chemical modification of the surface during the coating process may be of equal importance as the coating layer itself.« less

  20. The warmer the ocean surface, the shallower the mixed layer. How much of this is true?

    PubMed Central

    González‐Pola, C.; Fernández‐Diaz, J.

    2017-01-01

    Abstract Ocean surface warming is commonly associated with a more stratified, less productive, and less oxygenated ocean. Such an assertion is mainly based on consistent projections of increased near‐surface stratification and shallower mixed layers under global warming scenarios. However, while the observed sea surface temperature (SST) is rising at midlatitudes, the concurrent ocean record shows that stratification is not unequivocally increasing nor is MLD shoaling. We find that while SST increases at three study areas at midlatitudes, stratification both increases and decreases, and MLD deepens with enhanced deepening of winter MLDs at rates over 10 m  decade−1. These results rely on the estimation of several MLD and stratification indexes of different complexity on hydrographic profiles from long‐term hydrographic time‐series, ocean reanalysis, and Argo floats. Combining this information with estimated MLDs from buoyancy fluxes and the enhanced deepening/attenuation of the winter MLD trends due to changes in the Ekman pumping, MLD variability involves a subtle interplay between circulation and atmospheric forcing at midlatitudes. Besides, it is highlighted that the density difference between the surface and 200 m, the most widely used stratification index, should not be expected to reliably inform about changes in the vertical extent of mixing. PMID:29201584

  1. Molecular layer deposition of APTES on silicon nanowire biosensors: Surface characterization, stability and pH response

    NASA Astrophysics Data System (ADS)

    Liang, Yuchen; Huang, Jie; Zang, Pengyuan; Kim, Jiyoung; Hu, Walter

    2014-12-01

    We report the use of molecular layer deposition (MLD) for depositing 3-aminopropyltriethoxysilane (APTES) on a silicon dioxide surface. The APTES monolayer was characterized using spectroscopic ellipsometry, contact angle goniometry, and atomic force microscopy. Effects of reaction time of repeating pulses and simultaneous feeding of water vapor with APTES were tested. The results indicate that the synergistic effects of water vapor and reaction time are significant for the formation of a stable monolayer. Additionally, increasing the number of repeating pulses improved the APTES surface coverage but led to saturation after 10 pulses. In comparing MLD with solution-phase deposition, the APTES surface coverage and the surface quality were nearly equivalent. The hydrolytic stability of the resulting films was also studied. The results confirmed that the hydrolysis process was necessary for MLD to obtain stable surface chemistry. Furthermore, we compared the pH sensing results of Si nanowire field effect transistors (Si NWFETs) modified by both the MLD and solution methods. The highly repeatable pH sensing results reflected the stability of APTES monolayers. The results also showed an improved pH response of the sensor prepared by MLD compared to the one prepared by the solution treatment, which indicated higher surface coverage of APTES.

  2. The warmer the ocean surface, the shallower the mixed layer. How much of this is true?

    PubMed

    Somavilla, R; González-Pola, C; Fernández-Diaz, J

    2017-09-01

    Ocean surface warming is commonly associated with a more stratified, less productive, and less oxygenated ocean. Such an assertion is mainly based on consistent projections of increased near-surface stratification and shallower mixed layers under global warming scenarios. However, while the observed sea surface temperature (SST) is rising at midlatitudes, the concurrent ocean record shows that stratification is not unequivocally increasing nor is MLD shoaling. We find that while SST increases at three study areas at midlatitudes, stratification both increases and decreases, and MLD deepens with enhanced deepening of winter MLDs at rates over 10 m  decade-1. These results rely on the estimation of several MLD and stratification indexes of different complexity on hydrographic profiles from long-term hydrographic time-series, ocean reanalysis, and Argo floats. Combining this information with estimated MLDs from buoyancy fluxes and the enhanced deepening/attenuation of the winter MLD trends due to changes in the Ekman pumping, MLD variability involves a subtle interplay between circulation and atmospheric forcing at midlatitudes. Besides, it is highlighted that the density difference between the surface and 200 m, the most widely used stratification index, should not be expected to reliably inform about changes in the vertical extent of mixing.

  3. Can we map the interannual variability of the whole upper Southern Ocean with the current database of hydrographic observations?

    NASA Astrophysics Data System (ADS)

    Heuzé, Céline; Vivier, Frédéric; Le Sommer, Julien; Molines, Jean-Marc; Penduff, Thierry

    2016-04-01

    With the advent of Argo floats, it now seems feasible to study the interannual variations of upper ocean hydrographic properties of the historically undersampled Southern Ocean. To do so, scattered hydrographic profiles often first need to be mapped. To investigate biases and errors associated both with the limited space-time distribution of the profiles and with the mapping methods, we colocate the mixed layer depth (MLD) output from a state-of-the-art 1/12° DRAKKAR simulation onto the latitude, longitude and date of actual in-situ profiles from 2005 to 2014. We compare the results obtained after remapping using a nearest-neighbor (NN) interpolation and an objective analysis (OA) with different spatio-temporal grid resolutions and decorrelation scales. NN is improved with a coarser resolution. OA performs best with low decorrelation scales, avoiding too strong a smoothing, but returns values over larger areas with large decorrelation scales and low temporal resolution, as more points are available. For all resolutions OA represents better the annual extreme values than NN. Both methods underestimate the seasonal cycle in MLD. MLD biases are lower than 10 m on average but can exceed 250 m locally in winter. We argue that current Argo data should not be mapped to infer decadal trends in MLD, as all methods are unable to reproduce existing trends without creating unrealistic extra ones. We also show that regions of the subtropical Atlantic, Indian and Pacific Oceans, and the whole ice-covered Southern Ocean, still cannot be mapped even by the best method because of the lack of observational data. This article is protected by copyright. All rights reserved.

  4. Hybrid inorganic–organic superlattice structures with atomic layer deposition/molecular layer deposition

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tynell, Tommi; Yamauchi, Hisao; Karppinen, Maarit, E-mail: maarit.karppinen@aalto.fi

    2014-01-15

    A combination of the atomic layer deposition (ALD) and molecular layer deposition (MLD) techniques is successfully employed to fabricate thin films incorporating superlattice structures that consist of single layers of organic molecules between thicker layers of ZnO. Diethyl zinc and water are used as precursors for the deposition of ZnO by ALD, while three different organic precursors are investigated for the MLD part: hydroquinone, 4-aminophenol and 4,4′-oxydianiline. The successful superlattice formation with all the organic precursors is verified through x-ray reflectivity studies. The effects of the interspersed organic layers/superlattice structure on the electrical and thermoelectric properties of ZnO are investigatedmore » through resistivity and Seebeck coefficient measurements at room temperature. The results suggest an increase in carrier concentration for small concentrations of organic layers, while higher concentrations seem to lead to rather large reductions in carrier concentration.« less

  5. Functionalization of SiO2 Surfaces for Si Monolayer Doping with Minimal Carbon Contamination.

    PubMed

    van Druenen, Maart; Collins, Gillian; Glynn, Colm; O'Dwyer, Colm; Holmes, Justin D

    2018-01-17

    Monolayer doping (MLD) involves the functionalization of semiconductor surfaces followed by an annealing step to diffuse the dopant into the substrate. We report an alternative doping method, oxide-MLD, where ultrathin SiO 2 overlayers are functionalized with phosphonic acids for doping Si. Similar peak carrier concentrations were achieved when compared with hydrosilylated surfaces (∼2 × 10 20 atoms/cm 3 ). Oxide-MLD offers several advantages over conventional MLD, such as ease of sample processing, superior ambient stability, and minimal carbon contamination. The incorporation of an oxide layer minimizes carbon contamination by facilitating attachment of carbon-free precursors or by impeding carbon diffusion. The oxide-MLD strategy allows selection of many inexpensive precursors and therefore allows application to both p- and n-doping. The phosphonic acid-functionalized SiO 2 surfaces were investigated using X-ray photoelectron spectroscopy and attenuated total reflectance Fourier transform infrared spectroscopy, whereas doping was assessed using electrochemical capacitance voltage and Hall measurements.

  6. Slowing down of North Pacific climate variability and its implications for abrupt ecosystem change.

    PubMed

    Boulton, Chris A; Lenton, Timothy M

    2015-09-15

    Marine ecosystems are sensitive to stochastic environmental variability, with higher-amplitude, lower-frequency--i.e., "redder"--variability posing a greater threat of triggering large ecosystem changes. Here we show that fluctuations in the Pacific Decadal Oscillation (PDO) index have slowed down markedly over the observational record (1900-present), as indicated by a robust increase in autocorrelation. This "reddening" of the spectrum of climate variability is also found in regionally averaged North Pacific sea surface temperatures (SSTs), and can be at least partly explained by observed deepening of the ocean mixed layer. The progressive reddening of North Pacific climate variability has important implications for marine ecosystems. Ecosystem variables that respond linearly to climate forcing will have become prone to much larger variations over the observational record, whereas ecosystem variables that respond nonlinearly to climate forcing will have become prone to more frequent "regime shifts." Thus, slowing down of North Pacific climate variability can help explain the large magnitude and potentially the quick succession of well-known abrupt changes in North Pacific ecosystems in 1977 and 1989. When looking ahead, despite model limitations in simulating mixed layer depth (MLD) in the North Pacific, global warming is robustly expected to decrease MLD. This could potentially reverse the observed trend of slowing down of North Pacific climate variability and its effects on marine ecosystems.

  7. Magneto-Optic Materials for Biasing Ring Laser Gyros. Report Number 3. (Computer Model for Evaluating Scattering from Multi-Layer Dielectric Thin Film Structures Containing a Magnetic Layer.

    DTIC Science & Technology

    1980-09-30

    16. "Substituted Rare Earth Garnet Substrate Crystals and LPE Films for Magneto-optic Applications," M. Kestigian, W.R. Bekebrede and A.B. Smith, J...transparent garnet magnetic films have been discussed by workers at Sperry [4,5]. The above considerations indicate that it is highly desirable to have...metallic magnetic film , such as a garnet , on top of an MLD stack. C. A partially transparent (very thin) magnetic metal film on top of an MLD stack. We

  8. Building and Modification of the Continental Lithosphere: the History of the Contiguous U.S. as told by MLDs and LABs

    NASA Astrophysics Data System (ADS)

    Hopper, E.; Fischer, K. M.

    2016-12-01

    The lithosphere preserves a record of past and present tectonic processes in its internal structures and its boundary with the underlying asthenosphere. We use common conversion point stacked Sp converted waves recorded by EarthScope's Transportable Array, as well as other available permanent and temporary broadband stations, to image such structures in the lithospheric mantle of the contiguous U.S. In the tectonically youngest western U.S., a shallow, sharp velocity gradient at the base of the lithosphere suggests a boundary defined by ponded melt. The lithosphere thickens with age of volcanism, implying the lithosphere is a melt-mitigated, conductively cooling thermal boundary layer. Beneath older, colder lithosphere where melt fractions are likely much lower, the velocity gradient at the base of such a layer should be a more diffuse, primarily thermal boundary. This is consistent with observations in the eastern U.S. where the lithosphere-asthenosphere boundary (LAB) is locally sharp and shallower only in areas of inferred enhanced upwelling - such as ancient hot spot tracks and areas of inferred delamination. In the cratonic interior, the LAB is even more gradual in depth, and is transparent to Sp waves with dominant periods of 10 s. Although seismic imaging only provides a snapshot of the lithosphere as it is today, preserved internal structures extend the utility of this imaging back into deep geological time. Ancient accretion within the cratonic lithospheric mantle is preserved as dipping structures associated with relict subducted slabs from Paleoproterozoic continental accretion, suggesting that lateral accretion was integral to the cratonic mantle root formation process. Metasomatism, melt migration and ponding below a carbonated peridotite solidus explain a sub-horizontal mid-lithospheric discontinuity (MLD) commonly observed at 70-100 km depth. This type of MLD is strongest in Mesoproterozoic and older lithosphere, suggesting that it formed more vigorously in the deep past, that a billion years or more are required to build up an observable volatile-rich layer, or that strong, ancient lithosphere is required to support an inherently weak, volatilized layer.

  9. Impact of wave mixing on the sea ice cover

    NASA Astrophysics Data System (ADS)

    Rynders, Stefanie; Aksenov, Yevgeny; Madec, Gurvan; Nurser, George; Feltham, Daniel

    2017-04-01

    As information on surface waves in ice-covered regions becomes available in ice-ocean models, there is an opportunity to model wave-related processes more accurate. Breaking waves cause mixing of the upper water column and present mixing schemes in ocean models take this into account through surface roughness. A commonly used approach is to calculate surface roughness from significant wave height, parameterised from wind speed. We present results from simulations using modelled significant wave height instead, which accounts for the presence of sea ice and the effect of swell. The simulations use the NEMO ocean model coupled to the CICE sea ice model, with wave information from the ECWAM model of the European Centre for Medium-Range Weather Forecasts (ECMWF). The new waves-in-ice module allows waves to propagate in sea ice and attenuates waves according to multiple scattering and non-elastic losses. It is found that in the simulations with wave mixing the mixed layer depth (MLD) under ice cover is reduced, since the parameterisation from wind speed overestimates wave height in the ice-covered regions. The MLD change, in turn, affects sea ice concentration and ice thickness. In the Arctic, reduced MLD in winter translates into increased ice thicknesses overall, with higher increases in the Western Arctic and decreases along the Siberian coast. In summer, shallowing of the mixed layer results in more heat accumulating in the surface ocean, increasing ice melting. In the Southern Ocean the meridional gradient in ice thickness and concentration is increased. We argue that coupling waves with sea ice - ocean models can reduce negative biases in sea ice cover, affecting the distribution of nutrients and, thus, biological productivity and ecosystems. This coupling will become more important in the future, when wave heights in a large part of the Arctic are expected to increase due to sea ice retreat and a larger wave fetch. Therefore, wave mixing constitutes a possible positive feedback mechanism.

  10. Inter comparison of Tropical Indian Ocean features in different ocean reanalysis products

    NASA Astrophysics Data System (ADS)

    Karmakar, Ananya; Parekh, Anant; Chowdary, J. S.; Gnanaseelan, C.

    2017-09-01

    This study makes an inter comparison of ocean state of the Tropical Indian Ocean (TIO) in different ocean reanalyses such as global ocean data assimilation system (GODAS), ensemble coupled data assimilation (ECDA), ocean reanalysis system 4 (ORAS4) and simple ocean data assimilation (SODA) with reference to the in-situ buoy observations, satellite observed sea surface temperature (SST), EN4 analysis and ocean surface current analysis real time (OSCAR). Analysis of mean state of SST and sea surface salinity (SSS) reveals that ORAS4 is better comparable with satellite observations as well as EN4 analysis, and is followed by SODA, ECDA and GODAS. The surface circulation in ORAS4 is closer to OSCAR compared to the other reanalyses. However mixed layer depth (MLD) is better simulated by SODA, followed by ECDA, ORAS4 and GODAS. Seasonal evolution of error indicates that the highest deviation in SST and MLD over the TIO exists during spring and summer in GODAS. Statistical analysis with concurrent data of EN4 for the period of 1980-2010 supports that the difference and standard deviation (variability strength) ratio for SSS and MLD is mostly greater than one. In general the strength of variability is overestimated by all the reanalyses. Further comparison with in-situ buoy observations supports that MLD errors over the equatorial Indian Ocean (EIO) and the Bay of Bengal are higher than with EN4 analysis. Overall ORAS4 displays higher correlation and lower error among all reanalyses with respect to both EN4 analysis and buoy observations. Major issues in the reanalyses are the underestimation of upper ocean stability in the TIO, underestimation of surface current in the EIO, overestimation of vertical shear of current and improper variability in different oceanic variables. To improve the skill of reanalyses over the TIO, salinity vertical structure and upper ocean circulation need to be better represented in reanalyses.

  11. Atomic and Molecular Layer Deposition for Enhanced Lithium Ion Battery Electrodes and Development of Conductive Metal Oxide/Carbon Composites

    NASA Astrophysics Data System (ADS)

    Travis, Jonathan

    The performance and safety of lithium-ion batteries (LIBs) are dependent on interfacial processes at the positive and negative electrodes. For example, the surface layers that form on cathodes and anodes are known to affect the kinetics and capacity of LIBs. Interfacial reactions between the electrolyte and the electrodes are also known to initiate electrolyte combustion during thermal runaway events that compromise battery safety. Atomic layer deposition (ALD) and molecular layer deposition (MLD) are thin film deposition techniques based on sequential, self-limiting surface reactions. ALD and MLD can deposit ultrathin and conformal films on high aspect ratio and porous substrates such as composite particulate electrodes in lithium-ion batteries. The effects of electrode surface modification via ALD and MLD are studied using a variety of techniques. It was found that sub-nm thick coatings of Al2O 3 deposited via ALD have beneficial effects on the stability of LIB anodes and cathodes. These same Al2O3 ALD films were found to improve the safety of graphite based anodes through prevention of exothermic solid electrolyte interface (SEI) degradation at elevated temperatures. Ultrathin and conformal metal alkoxide polymer films known as "metalcones" were grown utilizing MLD techniques with trimethylaluminum (TMA) or titanium tetrachloride (TiCl4) and organic diols or triols, such as ethylene glycol (EG), glycerol (GL) or hydroquinone (HQ), as the reactants. Pyrolysis of these metalcone films under inert gas conditions led to the development of conductive metal oxide/carbon composites. The composites were found to contain sp2 carbon using micro-Raman spectroscopy in the pyrolyzed films with pyrolysis temperatures ≥ 600°C. Four point probe measurements demonstrated that the graphitic sp2 carbon domains in the metalcone films grown using GL and HQ led to significant conductivity. The pyrolysis of conformal MLD films to obtain conductive metal oxide/carbon composite films is presented as a method for enabling non-conductive, but possibly electrochemically active materials, to be used for electrochemical applications.

  12. Low-Temperature Molecular Layer Deposition Using Monofunctional Aromatic Precursors and Ozone-Based Ring-Opening Reactions.

    PubMed

    Svärd, Laura; Putkonen, Matti; Kenttä, Eija; Sajavaara, Timo; Krahl, Fabian; Karppinen, Maarit; Van de Kerckhove, Kevin; Detavernier, Christophe; Simell, Pekka

    2017-09-26

    Molecular layer deposition (MLD) is an increasingly used deposition technique for producing thin coatings consisting of purely organic or hybrid inorganic-organic materials. When organic materials are prepared, low deposition temperatures are often required to avoid decomposition, thus causing problems with low vapor pressure precursors. Monofunctional compounds have higher vapor pressures than traditional bi- or trifunctional MLD precursors, but do not offer the required functional groups for continuing the MLD growth in subsequent deposition cycles. In this study, we have used high vapor pressure monofunctional aromatic precursors in combination with ozone-triggered ring-opening reactions to achieve sustained sequential growth. MLD depositions were carried out by using three different aromatic precursors in an ABC sequence, namely with TMA + phenol + O 3 , TMA + 3-(trifluoromethyl)phenol + O 3 , and TMA + 2-fluoro-4-(trifluoromethyl)benzaldehyde + O 3 . Furthermore, the effect of hydrogen peroxide as a fourth step was evaluated for all studied processes resulting in a four-precursor ABCD sequence. According to the characterization results by ellipsometry, infrared spectroscopy, and X-ray reflectivity, self-limiting MLD processes could be obtained between 75 and 150 °C with each of the three aromatic precursors. In all cases, the GPC (growth per cycle) decreased with increasing temperature. In situ infrared spectroscopy indicated that ring-opening reactions occurred in each ABC sequence. Compositional analysis using time-of-flight elastic recoil detection indicated that fluorine could be incorporated into the film when 3-(trifluoromethyl)phenol and 2-fluoro-4-(trifluoromethyl)benzaldehyde were used as precursors.

  13. Atomic and molecular layer deposition for surface modification

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vähä-Nissi, Mika, E-mail: mika.vaha-nissi@vtt.fi; Sievänen, Jenni; Salo, Erkki

    2014-06-01

    Atomic and molecular layer deposition (ALD and MLD, respectively) techniques are based on repeated cycles of gas–solid surface reactions. A partial monolayer of atoms or molecules is deposited to the surface during a single deposition cycle, enabling tailored film composition in principle down to molecular resolution on ideal surfaces. Typically ALD/MLD has been used for applications where uniform and pinhole free thin film is a necessity even on 3D surfaces. However, thin – even non-uniform – atomic and molecular deposited layers can also be used to tailor the surface characteristics of different non-ideal substrates. For example, print quality of inkjetmore » printing on polymer films and penetration of water into porous nonwovens can be adjusted with low-temperature deposited metal oxide. In addition, adhesion of extrusion coated biopolymer to inorganic oxides can be improved with a hybrid layer based on lactic acid. - Graphical abstract: Print quality of a polylactide film surface modified with atomic layer deposition prior to inkjet printing (360 dpi) with an aqueous ink. Number of printed dots illustrated as a function of 0, 5, 15 and 25 deposition cycles of trimethylaluminum and water. - Highlights: • ALD/MLD can be used to adjust surface characteristics of films and fiber materials. • Hydrophobicity after few deposition cycles of Al{sub 2}O{sub 3} due to e.g. complex formation. • Same effect on cellulosic fabrics observed with low temperature deposited TiO{sub 2}. • Different film growth and oxidation potential with different precursors. • Hybrid layer on inorganic layer can be used to improve adhesion of polymer melt.« less

  14. Argo float observations of basin-scale deep convection in the Irminger Sea during winter 2011-2012

    NASA Astrophysics Data System (ADS)

    Thierry, V.; Piron, A.; Mercier, H.; Caniaux, G.

    2016-02-01

    An analysis of Argo data during the 2011-2012 winter revealed the presence of an exceptionally large number of profiles over the Irminger Basin with mixed layer depths (MLD) exceeding 700 m, which was deep enough to reach the pool of the intermediate Labrador Sea Water located in the Irminger Sea. Among them, 4 profiles exhibited an MLD of 1000 m, which was the maximum value observed this winter. Owing to the exceptional Argo sampling in the Irminger Sea during that winter the different phases of the mixed layer deepening down to 1000 m and their spatial extents were observed for the first time in the Irminger Sea. Two intense convective periods occurred in late January south of Cape Farewell and in late February-early March east of Greenland. A final deepening period was observed in mid-March during which the deepest mixed layers were observed. This long deepening period occurred in large regional areas and was followed by a rapid restratification phase. A mixed layer heat budget along the trajectories of the 4 floats that sampled the deepest mixed layers showed that heat loss at the air-sea interface was mainly responsible for heat content variations in the mixed layer. Greenland Tip Jets were of primary importance for the development of deep convection in the Irminger Sea in the 2011-2012 winter. They enhanced the winter heat loss and two long (more than 24 hours), intense and close in time late events boosted the mixed layer deepening down to 1000m. Net air-sea fluxes, the number of Greenland Tip Jets, the stratification of the water column, the NAO index and Ekman-induced heat flux are pertinent indicators to assess the favorable conditions for the development of deep convection in the Irminger Sea. When considering each of those indicators, we concluded that the 2011-2012 event was not significantly different compared to the three other documented occurrences of deep convection in the Irminger Sea.This work is a contribution to the NAOS project.

  15. Physical and Biogeochemical Controls of the Phytoplankton Blooms in North Western Mediterranean Sea: A Multiplatform Approach Over a Complete Annual Cycle (2012-2013 DEWEX Experiment)

    NASA Astrophysics Data System (ADS)

    Mayot, Nicolas; D'Ortenzio, Fabrizio; Taillandier, Vincent; Prieur, Louis; de Fommervault, Orens Pasqueron; Claustre, Hervé; Bosse, Anthony; Testor, Pierre; Conan, Pascal

    2017-12-01

    The North Western Mediterranean Sea exhibits recurrent and significant autumnal and spring phytoplankton blooms. The existence of these two blooms coincides with typical temperate dynamics. To determine the potential control of physical and biogeochemical factors on these phytoplankton blooms, data from a multiplatform approach (combining ships, Argo and BGC-Argo floats, and bio-optical gliders) were analyzed in association with satellite observations in 2012-2013. The satellite framework allowed a simultaneous analysis over the whole annual cycle of in situ observations of mixed layer depth, photosynthetical available radiation, particle backscattering, nutrients (nitrate and silicate), and chlorophyll-a concentrations. During the year 2012-2013, satellite ocean color observations, confirmed by in situ data, have revealed the existence of two areas (or bioregions) with comparable autumnal blooms but contrasting spring blooms. In both bioregions, the ratio of the euphotic zone (defined as the isolume 0.415 mol photons m-2 d-1, Z0.415) and the MLD identified the initiation of the autumnal bloom, as well as the maximal annual increase in [Chl-a] in spring. In fact, the autumnal phytoplankton bloom might be initiated by mixing of the summer shallowing deep chlorophyll maximum, while the spring restratification (when Z0.415/MLD ratio became >1) might induce surface phytoplankton production that largely overcomes the losses. Finally, winter deep convection events that took place in one of the bioregions induced higher net accumulation rate of phytoplankton in spring associated with a diatom-dominated phytoplankton community principally. We suggest that very deep winter MLD lead to an increase in surface silicates availability, which favored the development of diatoms.

  16. Impact of intra-seasonal oscillations of Indian summer monsoon on biogeochemical constituents of North Indian Ocean

    NASA Astrophysics Data System (ADS)

    Das, D.; Chakrabarty, M.; Goswami, S.; Basu, D.; Chaudhuri, S.

    2018-05-01

    The intra-seasonal perturbations in the atmospheric weather are closely related to the variability in the ocean circulation. NASA Ocean Biogeochemical Model (NOBM) couples the oceanic general circulation and the radiative forcing. The NOBM model products of nitrate, total chlorophyll, and mixed layer depth (MLD) collected during the period from 1998 to 2007 as well as the sea surface temperature (SST), precipitation, outgoing long wave radiation (OLR), and wind are considered in this study to identify the influence of intra-seasonal oscillation (ISO) of Indian summer monsoon (ISM) on the biogeochemical constituents of Bay of Bengal (BOB) (6°-22° N; 80°-100° E) and Arabian Sea (AS) (3°-17° N; 55°-73.5° E) of North Indian Ocean (NIO). The active and break phases are the most significant components of ISO during ISM. The result of the study reveals that the upper ocean biology and chemistry significantly vary during the said phases of ISM. The nitrate, total chlorophyll, and MLD are observed to be strongly correlated with the ISO of ISM. The result shows that, during ISO of ISM, the concentration of nitrate and chlorophyll is strongly and positively correlated both in BOB and AS. However, the correlation is more in AS, endorsing that the Arabian Sea is more nutrient reach than Bay of Bengal. Nitrate and MLD, on the other hand, are strongly but negatively correlated in the said basins of North Indian Ocean (NIO). The forcing behind the variability of the biogeochemical constituents of BOB and AS during active and break phases of ISM is identified through the analyses of SST, precipitation, OLR, and wind.

  17. In Situ Infrared Spectroscopic Studies of Molecular Layer Deposition and Atomic Layer Etching Processes

    NASA Astrophysics Data System (ADS)

    DuMont, Jaime Willadean

    In this thesis, in situ Fourier transform infrared (FTIR) spectroscopy was used to study: i) the growth and pyrolysis of molecular layer deposition (MLD) films. ii) the surface chemistry of atomic layer etching (ALE) processes. Atomic layer processes such as molecular layer deposition (MLD) and atomic layer etching (ALE) are techniques that can add or remove material with atomic level precision using sequential, self-limiting surface reactions. Deposition and removal processes at the atomic scale are powerful tools for many industrial and research applications such as energy storage and semiconductor nanofabrication. The first section of this thesis describes the chemistry of reactions leading to the MLD of aluminum and tin alkoxide polymer films known as "alucone" and "tincone", respectively. The subsequent pyrolysis of these films to produce metal oxide/carbon composites was also investigated. In situ FTIR spectroscopy was conducted to monitor surface species during MLD film growth and to monitor the films background infrared absorbance versus pyrolysis temperature. Ex situ techniques such as transmission electron microscopy (TEM), four-point probe and X-ray diffraction (XRD) were utilized to study the properties of the films post-pyrolysis. TEM confirmed that the pyrolyzed films maintained conformality during post-processing. Four-point probe monitored film resistivity versus pyrolysis temperature and XRD determined the film crystallinity. The second section of this thesis focuses on the surface chemistry of Al2O3 and SiO2 ALE processes, respectively. Thermal ALE processes have been recently developed which utilize sequential fluorination and ligand exchange reactions. An intimate knowledge of the surface chemistry is important in understanding the ALE process. In this section, the competition between the Al2O3 etching and AlF 3 growth that occur during sequential HF (fluorinating agent) and TMA (ligand exchange) exposures is investigated using in situ FTIR spectroscopy. Also included in this section is the first demonstration of thermal ALE for SiO2. In situ FTIR spectroscopy was conducted to monitor the loss of bulk Si-O vibrational modes corresponding to the removal of SiO2. FTIR was also used to monitor surface species during each ALE half cycle and to verify self-limiting behavior. X-ray reflectivity experiments were conducted to establish etch rates on thermal oxide silicon wafers.

  18. Surface wave effect on the upper ocean in marine forecast

    NASA Astrophysics Data System (ADS)

    Wang, Guansuo; Qiao, Fangli; Xia, Changshui; Zhao, Chang

    2015-04-01

    An Operational Coupled Forecast System for the seas off China and adjacent (OCFS-C) is constructed based on the paralleled wave-circulation coupled model, which is tested with comprehensive experiments and operational since November 1st, 2007. The main feature of the system is that the wave-induced mixing is considered in circulation model. Daily analyses and three day forecasts of three-dimensional temperature, salinity, currents and wave height are produced. Coverage is global at 1/2 degreed resolution with nested models up to 1/24 degree resolution in China Sea. Daily remote sensing sea surface temperatures (SST) are taken to relax to an analytical product as hot restarting fields for OCFS-C by the Nudging techniques. Forecasting-data inter-comparisons are performed to measure the effectiveness of OCFS-C in predicting upper-ocean quantities including SST, mixed layer depth (MLD) and subsurface temperature. The variety of performance with lead time and real-time is discussed as well using the daily statistic results for SST between forecast and satellite data. Several buoy observations and many Argo profiles are used for this validation. Except the conventional statistical metrics, non-dimension skill scores (SS) is taken to estimate forecast skill. Model SST comparisons with more one year-long SST time series from 2 buoys given a large SS value (more than 0.90). And skill in predicting the seasonal variability of SST is confirmed. Model subsurface temperature comparisons with that from a lot of Argo profiles indicated that OCFS-C has low skill in predicting subsurface temperatures between 80m and 120m. Inter-comparisons of MLD reveal that MLD from model is shallower than that from Argo profiles by about 12m. QCFS-C is successful and steady in predicting MLD. The daily statistic results for SST between 1-d, 2-d and 3-d forecast and data is adopted to describe variability of Skill in predicting SST with lead time or real time. In a word QCFS-C shows reasonable accuracy over a series of studies designed to test ability to predict upper ocean conditions.

  19. Safe and Durable High-Temperature Lithium-Sulfur Batteries via Molecular Layer Deposited Coating.

    PubMed

    Li, Xia; Lushington, Andrew; Sun, Qian; Xiao, Wei; Liu, Jian; Wang, Biqiong; Ye, Yifan; Nie, Kaiqi; Hu, Yongfeng; Xiao, Qunfeng; Li, Ruying; Guo, Jinghua; Sham, Tsun-Kong; Sun, Xueliang

    2016-06-08

    Lithium-sulfur (Li-S) battery is a promising high energy storage candidate in electric vehicles. However, the commonly employed ether based electrolyte does not enable to realize safe high-temperature Li-S batteries due to the low boiling and flash temperatures. Traditional carbonate based electrolyte obtains safe physical properties at high temperature but does not complete reversible electrochemical reaction for most Li-S batteries. Here we realize safe high temperature Li-S batteries on universal carbon-sulfur electrodes by molecular layer deposited (MLD) alucone coating. Sulfur cathodes with MLD coating complete the reversible electrochemical process in carbonate electrolyte and exhibit a safe and ultrastable cycle life at high temperature, which promise practicable Li-S batteries for electric vehicles and other large-scale energy storage systems.

  20. Iron-Terephthalate Coordination Network Thin Films Through In-Situ Atomic/Molecular Layer Deposition.

    PubMed

    Tanskanen, A; Karppinen, M

    2018-06-12

    Iron terephthalate coordination network thin films can be fabricated using the state-of-the-art gas-phase atomic/molecular layer deposition (ALD/MLD) technique in a highly controlled manner. Iron is an Earth-abundant and nonhazardous transition metal, and with its rich variety of potential applications an interesting metal constituent for the inorganic-organic coordination network films. Our work underlines the role of the metal precursor used when aiming at in-situ ALD/MLD growth of crystalline inorganic-organic thin films. We obtain crystalline iron terephthalate films when FeCl 3 is employed as the iron source whereas depositions based on the bulkier Fe(acac) 3 precursor yield amorphous films. The chemical composition and structure of the films are investigated with GIXRD, XRR, FTIR and XPS.

  1. Novel processing to produce polymer/ceramic nanocomposites by atomic layer deposition

    NASA Astrophysics Data System (ADS)

    Liang, Xinhua

    Polymeric materials can be greatly influenced by nanoscale inclusions of inorganic materials. The main goal of this thesis is to fabricate novel polymer/ceramic composite materials for two different applications using atomic layer deposition (ALD) or molecular layer deposition (MLD) methods. One is to produce well-dispersed polymer/ceramic nanocomposites with improved barrier properties for packaging applications. The other is to produce porous polymer/ceramic composites with improved bioactivity for tissue engineering applications. ALD has been successfully utilized for the conformal and uniform deposition of ultra-thin alumina and titania films on primary micron-sized polymer particles. The mechanism to initiate alumina and titania ALD on polymer particles without chemical functional groups was confirmed. A nucleation period was needed for both alumina and titania ALD on high density polyethylene (HDPE) particles and no nucleation period was needed for alumina ALD on polymethyl methacrylate particles. Titania ALD films deposited at low temperatures had an amorphous structure and showed much weaker photoactivity than common pigment-grade anatase TiO2 particles. Highly uniform and conformal ultra-thin aluminum alkoxide (alucone) polymer films were deposited on primary silica and titania nanoparticles using MLD in a fluidized bed reactor. The deposition chemistry and properties of alucone MLD films were investigated. The photoactivity of pigment-grade TiO2 particles was quenched after 20 cycles of an alucone MLD film, but the films shrank and decomposed in the presence of water, which decreased the passivation effect of the photoactivity of TiO2 particles. Well-dispersed polymer/ceramic nanocomposites were obtained by extruding alumina ALD coated HDPE particles. The diffusion coefficient of the fabricated nanocomposite membranes can be reduced by half with the inclusion of 7.3 vol.% alumina flakes. However, a corresponding increase in permeability was also observed due to the voids formed at or near the interface of the polymer and alumina flakes during the extrusion process. Efforts to improve the barrier properties of the membranes included 3-aminopropyltriethoxysilane treatment and coating alucone MLD films on alumina coated particles prior to extrusion. The porous polymer/ceramic particles were synthesized by depositing ultra-thin alumina or titania films on highly porous poly(styrene-divinylbenzene) particles using a low-temperature ALD process. Analytical characterization revealed that conformal alumina and titania films were grown on internal and external polymer particle surfaces, and the pore filling mechanism was a uniform coating of the pore walls. The ALD layers can improve the bioactivity and protein adsorption of the polymer substrates.

  2. Growth, characterization and post-processing of inorganic and hybrid organic-inorganic thin films deposited using atomic and molecular layer deposition techniques

    NASA Astrophysics Data System (ADS)

    Abdulagatov, Aziz Ilmutdinovich

    Atomic layer deposition (ALD) and molecular layer deposition (MLD) are advanced thin film coating techniques developed for deposition of inorganic and hybrid organic-inorganic films respectively. Decreasing device dimensions and increasing aspect ratios in semiconductor processing has motivated developments in ALD. The beginning of this thesis will cover study of new ALD chemistry for high dielectric constant Y 2O3. In addition, the feasibility of conducting low temperature ALD of TiN and TiAlN is explored using highly reactive hydrazine as a new nitrogen source. Developments of these ALD processes are important for the electronics industry. As the search for new materials with more advanced properties continues, attention has shifted toward exploring the synthesis of hierarchically nanostructured thin films. Such complex architectures can provide novel functions important to the development of state of the art devices for the electronics industry, catalysis, energy conversion and memory storage as a few examples. Therefore, the main focus of this thesis is on the growth, characterization, and post-processing of ALD and MLD films for fabrication of novel composite (nanostructured) thin films. Novel composite materials are created by annealing amorphous ALD oxide alloys in air and by heat treatment of hybrid organic-inorganic MLD films in inert atmosphere (pyrolysis). The synthesis of porous TiO2 or Al2O3 supported V2O5 for enhanced surface area catalysis was achieved by the annealing of inorganic TiVxOy and AlV xOy ALD films in air. The interplay between phase separation, surface energy difference, crystallization, and melting temperature of individual oxides were studied for their control of film morphology. In other work, a class of novel metal oxide-graphitic carbon composite thin films was produced by pyrolysis of MLD hybrid organic-inorganic films. For example, annealing in argon of titania based hybrid films enabled fabrication of thin films of intimately mixed TiO2 and nanographitized carbon. The graphitized carbon in the film was formed as a result of the removal of hydrogen by pyrolysis of the organic constituency of the MLD film. The presence of graphitic carbon allowed a 14 orders of magnitude increase in the electrical conductivity of the composite material compared fully oxidized rutile TiO 2.

  3. A taxonomy of three species of negative velocity arrivals in the lithospheric mantle beneath the United States using Sp receiver functions

    NASA Astrophysics Data System (ADS)

    Foster, K.; Dueker, K.; McClenahan, J.; Hansen, S. M.; Schmandt, B.

    2012-12-01

    The Transportable Array, with significant supplement from past PASSCAL experiments, provides an unprecedented opportunity for a holistic view over the geologically and tectonically diverse continent. New images from 34,000 Sp Receiver Functions image lithospheric and upper mantle structure that has not previously been well constrained, significant to our understanding of upper mantle processes and continental evolution. The negative velocity gradient (NVG) found beneath the Moho has been elusive and is often loosely termed the "Lithosphere-Asthenosphere Boundary" (LAB).This label is used by some researchers to indicate a rheological boundary, a thermal gradient, an anisotropic velocity contrast, or a compositional boundary, and much confusion has arisen around what observed NVG arrivals manifest. Deconvolution across up to 400 stations simultaneously has enhanced the source wavelet estimation and allowed for more accurate receiver functions. In addition, Sdp converted phases are precursory to the direct S phase arrival, eliminating the issue of contamination from reverberated phases that add noise to Ps receiver functions in this lower-lithospheric and upper mantle depth range. We present taxonomy of the NVG arrivals beneath the Moho across the span of the Transportable Array (125° - 85° W). The NVG is classified into three different categories, primarily distinguished by the estimated temperature at the depth of the arrival. The first species of Sp NVG arrivals is found to be in the region west of the Precambrian rift hinge line, at a depth range of 70 - 90 km, corresponding to a temperature of >1150° C. This temperature and depth is predicted to be supersolidus for a 0.02% weight H2O Peridotite (Katz et al., 2004), supporting the theory that these arrivals are due to a melt-staging area (MSA), which could be correlated with the base of the thermal lithosphere. The current depth estimate of the cratonic US thermal LAB ranges from 150-220 km (Yuan and Romanowitz, 2010), and yet a pervasive arrival in our Sp and Ps images shows a NVG ranging from 80 - 110 km depth, with temperature estimates of ~800° C. Clearly internal to the lithosphere, this signal cannot be a LAB arrival. Hence, our second species of NVG is a Mid-Lithospheric Discontinuity (MLD) that we interpret as a layer of sub-solidus metasomatic minerals that have solidus in the 1000-1100°C range near three Gpa. These low solidus minerals are amphibole, phlogophite, and carbon-bearing phases. A freezing front (solidus) near three Gpa freezing front would concentrate these low velocity minerals to make a metasomatic layer over Ga time-scales to explain our NVG MLD arrivals. A third species of NVG, in the "warm" category of 950-1150° C, exists beneath the intermountain west region of Laramide shortening that extends from Montana to New Mexico. This region has experienced abundant post-Eocene alkaline magmatism. Mantle xenoliths from this region provide temperature at depth measurements which are in agreement with our surface wave velocity based temperature estimates. Thus, this NVG arrival is interpreted as a near to super-solidus metasomatic layer. Noteworthy is that a deeper arrival (150-190 km) is intermittently observed which would be more relative to the base of the thermal lithosphere.

  4. Upper ocean response to the passage of two sequential typhoons

    NASA Astrophysics Data System (ADS)

    Wu, Renhao; Li, Chunyan

    2018-02-01

    Two sequential typhoons, separated by five days, Chan-hom and Nangka in the summer of 2015, provided a unique opportunity to study the oceanic response and cold wake evolution. The upper ocean response to the passage of these two typhoons was investigated using multi-satellite, Argo float data and HYCOM global model output. The sea surface cooling (SSC) induced by Chan-hom was gradually enhanced along its track when the storm was intensified while moving over the ocean with shallow mixed layer. The location of maximum cooling of sea surface was determined by the storm's translation speed as well as pre-typhoon oceanic conditions. As a fast-moving storm, Chan-hom induced significant SSC on the right side of its track. Localized maximum cooling patches are found over a cyclonic eddy (CE). An analysis of data from Argo floats near the track of Chan-hom demonstrated that the mixed layer temperature (MLT) and mixed layer depth (MLD) had more variabilities on the right side than those on the left side of Chan-hom's track, while mixed layer salinity (MLS) response was different from those of MLT and MLD with an increase in salinity to the right side and a decrease in salinity to the left side of the track. Subsequently, because of the remnant effect of Chan-hom, the strong upwelling induced by Typhoon Nangka, the pre-existing CE as well as a slow translation speed (<2 m s-1) of the storm, the most significant SSC ( 6 °C) was observed over the CE region in the wake of the storm. Further, Nangka experienced a rapid weakening suggesting immediate negative feedback from the intensified SSC occurred in the CE region. After these two typhoons, the CE was enhanced and the sea surface height of eddy core was depressed by 10 cm. It took more than one month for SSC to restore to its pre-typhoon conditions, with the anomalous geostrophic current advection playing an important role in the process. The enhancement of chlorophyll-a concentrations was also noticed at both the CE region and close to Chan-hom's track.

  5. Upper mantle structure across the Trans-European Suture Zone imaged by S-receiver functions

    NASA Astrophysics Data System (ADS)

    Knapmeyer-Endrun, Brigitte; Krüger, Frank; Geissler, Wolfram H.; Passeq Working Group

    2017-01-01

    We present a high-resolution study of the upper mantle structure of Central Europe, including the western part of the East European Platform, based on S-receiver functions of 345 stations. A distinct contrast is found between Phanerozoic Europe and the East European Craton across the Trans-European Suture Zone. To the west, a pronounced velocity reduction with depth interpreted as lithosphere-asthenosphere boundary (LAB) is found at an average depth of 90 km. Beneath the craton, no strong and continuous LAB conversion is observed. Instead we find a distinct velocity reduction within the lithosphere, at 80-120 km depth. This mid-lithospheric discontinuity (MLD) is attributed to a compositional boundary between depleted and more fertile lithosphere created by late Proterozoic metasomatism. A potential LAB phase beneath the craton is very weak and varies in depth between 180 and 250 km, consistent with a reduced velocity contrast between the lower lithosphere and the asthenosphere. Within the Trans-European Suture Zone, lithospheric structure is characterized by strong heterogeneity. A dipping or step-wise increase to LAB depth of 150 km is imaged from Phanerozoic Europe to 20-22° E, whereas no direct connection to the cratonic LAB or MLD to the east is apparent. At larger depths, a positive conversion associated with the lower boundary of the asthenosphere is imaged at 210-250 km depth beneath Phanerozoic Europe, continuing down to 300 km depth beneath the craton. Conversions from both 410 km and 660 km discontinuities are found at their nominal depth beneath Phanerozoic Europe, and the discontinuity at 410 km depth can also be traced into the craton. A potential negative conversion on top of the 410 km discontinuity found in migrated images is analyzed by modeling and attributed to interference with other converted phases.

  6. Variability of upper ocean thermohaline structure during a MJO event from DYNAMO aircraft observations

    NASA Astrophysics Data System (ADS)

    Alappattu, Denny P.; Wang, Qing; Kalogiros, John; Guy, Nick; Jorgensen, David P.

    2017-02-01

    This paper reports upper ocean thermohaline structure and variability observed during the life cycle of an intense Madden Julian Oscillation (MJO) event occurred in the southern tropical Indian Ocean (14°S-Eq, 70°E-81°E). Water column measurements for this study were collected using airborne expendable probes deployed from NOAA's WP-3D Orion aircraft operated as a part of Dynamics of MJO field experiment conducted during November-December 2011. Purpose of the study is twofold; (1) to provide a statistical analysis of the upper ocean properties observed during different phases of MJO and, (2) to investigate how the upper ocean thermohaline structure evolved in the study region in response to the MJO induced perturbation. During the active phase of MJO, mixed layer depth (MLD) had a characteristic bimodal distribution. Primary and secondary modes were at ˜34 m and ˜65 m, respectively. Spatial heterogeneity of the upper ocean response to the MJO forcing was the plausible reason for bimodal distribution. Thermocline and isothermal layer depth deepened, respectively, by 13 and 19 m from the suppressed through the restoring phase of MJO. Thicker (>30 m) barrier layers were found to occur more frequently in the active phase of MJO, associated with convective rainfalls. Additionally, the water mass analysis indicated that, in the active phase of this MJO event the subsurface was dominated by Indonesian throughflow, nonetheless intrusion of Arabian Sea high saline water was also noted near the equator.

  7. Seasonality of Red Sea Mixed-Layer Depth and Density Budget

    NASA Astrophysics Data System (ADS)

    Kartadikaria, A. R.; Cerovecki, I.; Krokos, G.; Hoteit, I.

    2016-02-01

    The Red Sea is an active area of water mass formation. Dense water initially formed in the northern Red Sea, in the Gulf of Aqaba and the Gulf of Suez, spreads southward and finally flows to the open ocean through the Gulf of Aden via the narrow strait of Bab Al Mandeb. The signature of this outflow can be traced until the southern Indian Ocean, and is characterized by potential density of σθ ≈ 27.4. This water mass is important because it represents a significant source of heat and salt for the Indian Ocean. Using a high-resolution 1km regional MITgcm ocean model for the period 1992-2001 configured for the Red Sea, we examine the spatio-temporal characteristics of water mass formation inside the basin by analyzing closed and complete temperature and salinity budgets. The deepest mixed-layers (MLD) always develop in the northern part of the basin where surface ocean buoyancy loss leads to the Red Sea Intermediate and Deep Water formation. As this water is advected south, it is strongly modified by diapycnal mixing of heat and salt.

  8. Innovation Meets Performance Demands of Advanced Lithium-ion Batteries

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Advancements in high capacity and low density battery technologies have led to a growing need for battery materials with greater charge capacity and therefore stability. NREL's developments in ALD and molecular layer MLD allow for thin film coatings to battery composite electrodes, which can improve battery lifespan, high charge capacity, and stability. Silicon, one of the best high-energy anode materials for Li-ion batteries, can experience capacity fade from volumetric expansion. Using MLD to examine how surface modification could stabilize silicon anode material in Li-ion batteries, researchers discovered a new reaction precursor that leads to a flexible surface coating that accommodatesmore » volumetric expansion of silicon electrodes.« less

  9. Long-term outcomes after allogeneic hematopoietic stem cell transplantation for metachromatic leukodystrophy: the largest single-institution cohort report.

    PubMed

    Boucher, Alexander A; Miller, Weston; Shanley, Ryan; Ziegler, Richard; Lund, Troy; Raymond, Gerald; Orchard, Paul J

    2015-08-07

    Metachromatic Leukodystrophy (MLD) is a rare, fatal demyelinating disorder with limited treatment options. Published outcomes after hematopoietic stem cell transplantation (HSCT) are scant and mixed. We report survival and function following HSCT for a large, single-center MLD cohort. Transplant-related data, survival and serial measures (brain MRI, nerve conduction velocity (NCV), neurologic and neuropsychology evaluations) were reviewed. When possible, parental interviews informed current neurologic status, quality-of-life, and adaptive functioning. Gross motor and expressive functions for late-infantile (LI-MLD) and juvenile (J-MLD) patients were described using previously reported, MLD-specific scales. Forty patients with confirmed MLD have undergone HSCT at our center. Twenty-one (53 %) survive at a median 12 years post-HSCT. Most deaths (n = 17) were treatment-related; two died from disease progression. Survival did not depend upon MLD subtype or symptom status at transplant. LI-MLD patients survive beyond reported life expectancy in untreated disease. Abnormal brain MRI and peripheral nerve conduction velocities (NCV) were common before HSCT. Following transplant, fewer patients experienced MRI progression compared to NCV deterioration. Sixteen LI-MLD and J-MLD survivors were evaluable for long-term gross motor and/or expressive language functioning using existing MLD clinical scoring systems. While most J-MLD patients regressed, the aggregate cohort demonstrated superior retention of function compared to published natural history. Seventeen LI-MLD, J-MLD and adult subtype (A-MLD) survivors were evaluable for long-term adaptive functioning, activities of daily living, and/or cognition. Relative cognitive sparing was observed despite overall global decline. Five sibling pairs (one LI-MLD and four J-MLD), in which at least one underwent transplant in our cohort, were evaluable. Within each familial dyad, survival or function was superior for the treated sibling, or if both siblings were transplanted, for the pre-symptomatic sibling. HSCT is a viable treatment option for MLD, but has significant limitations. Later-onset phenotypes may benefit most from early, pre-symptomatic transplant. Until superior, novel treatment strategies are demonstrated, MLD patients should be carefully considered for HSCT.

  10. Multilineage dysplasia is associated with a poorer prognosis in patients with de novo acute myeloid leukemia with intermediate-risk cytogenetics and wild-type NPM1.

    PubMed

    Rozman, María; Navarro, José-Tomás; Arenillas, Leonor; Aventín, Anna; Giménez, Teresa; Alonso, Esther; Perea, Granada; Camós, Mireia; Navarrete, Mayda; Tuset, Esperanza; Florensa, Lourdes; Millá, Fuensanta; Nomdedéu, Josep; de la Banda, Esmeralda; Díaz-Beyá, Marina; Pratcorona, Marta; Garrido, Ana; Navarro, Blanca; Brunet, Salut; Sierra, Jorge; Esteve, Jordi

    2014-10-01

    Acute myeloid leukemia (AML) with myelodysplasia-related changes is characterized by the presence of multilineage dysplasia (MLD), frequently related to high-risk cytogenetics and poor outcome. However, the presence of MLD does not modify the favorable prognostic impact of NPM1 mutation. The prognosis of patients with AML presenting marked dysplasia lacking high-risk cytogenetics and NPM1 mutation is uncertain. We evaluated the prognostic impact of MLD in 177 patients with intermediate-risk cytogenetics AML (IR-AML) and wild-type NPM1. Patients were categorized as MLD-WHO (WHO myelodysplasia criteria; n = 43, 24 %), MLD-NRW (significant MLD non-reaching WHO criteria; n = 16, 9 %), absent MLD (n = 80, 45 %), or non-evaluable MLD (n = 38, 22 %). No differences concerning the main characteristics were observed between patients with or without MLD. Outcome of patients with MLD-WHO and MLD-NRW was similar, and significantly worse than patients lacking MLD. The presence of MLD (66 vs. 80 %, p = 0.03; HR, 95 % CI = 2.3, 1.08-4.08) and higher leukocyte count at diagnosis was the only variable associated with lower probability of complete remission after frontline therapy. Concerning survival, age and leukocytes showed an independent prognostic value, whereas MLD showed a trend to a negative impact (p = 0.087, HR, 95 % CI = 1.426, 0.95-2.142). Moreover, after excluding patients receiving an allogeneic stem cell transplantation in first CR, MLD was associated with a shorter survival (HR, 95 % CI = 1.599, 1.026-2.492; p = 0.038). In conclusion, MLD identifies a subgroup of patients with poorer outcome among patients with IR-AML and wild-type NPM1.

  11. Mixing and phytoplankton dynamics in a submarine canyon in the West Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Carvalho, Filipa; Kohut, Josh; Oliver, Matthew J.; Sherrell, Robert M.; Schofield, Oscar

    2016-07-01

    Bathymetric depressions (canyons) exist along the West Antarctic Peninsula shelf and have been linked with increased phytoplankton biomass and sustained penguin colonies. However, the physical mechanisms driving this enhanced biomass are not well understood. Using a Slocum glider data set with over 25,000 water column profiles, we evaluate the relationship between mixed layer depth (MLD, estimated using the depth of maximum buoyancy frequency) and phytoplankton vertical distribution. We use the glider deployments in the Palmer Deep region to examine seasonal and across canyon variability. Throughout the season, the ML becomes warmer and saltier, as a result of vertical mixing and advection. Shallow ML and increased stratification due to sea ice melt are linked to higher chlorophyll concentrations. Deeper mixed layers, resulting from increased wind forcing, show decreased chlorophyll, suggesting the importance of light in regulating phytoplankton productivity. Spatial variations were found in the canyon head region where local physical water column properties were associated with different biological responses, reinforcing the importance of local canyon circulation in regulating phytoplankton distribution in the region. While the mechanism initially hypothesized to produce the observed increases in phytoplankton over the canyons was the intrusion of warm, nutrient enriched modified Upper Circumpolar Deep Water (mUCDW), our analysis suggests that ML dynamics are key to increased primary production over submarine canyons in the WAP.

  12. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lemaire, Paul C.; Oldham, Christopher J.; Parsons, Gregory N., E-mail: gnp@ncsu.edu

    Molecular layer deposition (MLD) of “metalcones,” including alucone, zincone, titanicone, and others, involves self-limiting half-reactions between organic and organometallic (or metal-halide) reactants. Studies have typically focused on metal precursors reacting with ethylene glycol or glycerol to form the films' polymeric O-M-O-(CH{sub x}){sub y}-O-M-O repeat units. The authors report new MLD materials that incorporate tertiary amine groups into the organic linkage. Specifically, reacting triethanolamine (TEA) with either trimethylaluminum or titanium tetrachloride produces TEA-alucone (Al-TEA) and TEA-titanicone (Ti-TEA), respectively, and the amine group leads to unique physical and optical properties. Fourier-transform infrared (FTIR) analysis confirms that the films have prominent C-H, C-N,more » and M-O-C peaks, consistent with the expected bond structure. When exposed to vapors, including water, alcohol, or ammonia, the Ti-TEA films changed their visible color within minutes and increased physical thickness by >35%. The Al-TEA showed significantly less response. X-ray photoelectron spectroscopy and FTIR suggest that HCl generated during MLD coordinates to the amine forming a quaternary ammonium salt that readily binds adsorbates via hydrogen bonding. The visible color change is reversible, and ellipsometry confirms that the color change results from vapor absorption. The unique absorptive and color-changing properties of the TEA-metalcone films point to new possible applications for MLD materials in filtration, chemical absorption, and multifunctional chemical separations/sensing device systems.« less

  13. Quantification of sulfatides in dried blood and urine spots from metachromatic leukodystrophy patients by liquid chromatography/electrospray tandem mass spectrometry.

    PubMed

    Barcenas, Mariana; Suhr, Teryn R; Scott, C Ronald; Turecek, Frantisek; Gelb, Michael H

    2014-06-10

    Treatments are being developed for metachromatic leukodystrophy (MLD), suggesting the need for eventual newborn screening. Previous studies have shown that sulfatide molecular species are increased in the urine of MLD patients compared to samples from non-MLD individuals, but there is no data using dried blood spots (DBS), the most common sample available for newborn screening laboratories. We used ultra-high performance liquid chromatography/tandem mass spectrometry (UHPLC/MS/MS) to quantify sulfatides in DBS and dried urine spots from 14 MLD patients and 50 non-MLD individuals. Several sulfatide molecular species were increased in dried urine samples from all MLD samples compared to non-MLD samples. Sulfatides, especially low molecular species, were increased in DBS from MLD patients, but the sulfatide levels were relatively low. There was good separation in sulfatide levels between MLD and non-MLD samples when dried urine spots were used, but not with DBS, because DBS from non-MLD individuals have measurable levels of sulfatides. Sulfatide accumulation studies in urine, but not in DBS, emerges as the method of choice if newborn screening is to be proposed for MLD. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Evaluation of an eddy resolving global model at the Bermuda Atlantic Time-series Study site

    NASA Astrophysics Data System (ADS)

    Hiron, L.; Goncalves Neto, A.; Bates, N. R.; Johnson, R. J.

    2016-02-01

    The Bermuda Atlantic Time-series Study (BATS) commenced monthly sampling in 1988 and thus provides an invaluable 27 years of ocean temperature and salinity profiles for inferring climate relevant processes. However, the passage of mesoscale eddies through this site complicates the local heat and salinity budgets due to inadequate spatial and temporal sampling of these eddy systems. Thus, application of high resolution operational numerical models potentially offers a framework for estimating the horizontal transport due to mesoscale processes. The goal of this research was to analyze the accuracy of the MERCATOR operational 1/12° global ocean model at the BATS site by comparing temperature, salinity and heat budgets for years 2008 - 2015. Overall agreement in the upper 540m for temperature and salinity is found to be very encouraging with significant (P< 0.01) correlations at all depths for both fields. The highest value of correlation coefficient for the temperature field is 0.98 at the surface which decreases to 0.66 at 150m and then reaches a minimum of 0.50 at 320 to 540m. Similarly, the highest correlation coefficient for salinity is found at the surface, with a value of 0.83 and then decreases to a minimum of 0.25 in the subtropical mode water though then increases to 0.5 at 540m. Mixing in the MERCATOR model is also very well captured with a mixed layer depth (MLD) correlation coefficient of 0.92 for the seven year period. Finally, the total heat budget (0-540m) from MERCATOR varies coherently with the BATS observations as shown by a high correlation coefficient of 0.84 (P < 0.01). According to these analyses, daily output from the MERCATOR model represents accurately the temperature, salinity, heat budget and MLD at the BATS site. We propose this model can be used in future research at the BATS site by providing information about mesoscale structure and importantly, advective fluxes at this site.

  15. Conformal and highly luminescent monolayers of Alq3 prepared by gas-phase molecular layer deposition.

    PubMed

    Räupke, André; Albrecht, Fabian; Maibach, Julia; Behrendt, Andreas; Polywka, Andreas; Heiderhoff, Ralf; Helzel, Jonatan; Rabe, Torsten; Johannes, Hans-Hermann; Kowalsky, Wolfgang; Mankel, Eric; Mayer, Thomas; Görrn, Patrick; Riedl, Thomas

    2014-01-22

    The gas-phase molecular layer deposition (MLD) of conformal and highly luminescent monolayers of tris(8-hydroxyquinolinato)aluminum (Alq3) is reported. The controlled formation of Alq3 monolayers is achieved for the first time by functionalization of the substrate with amino groups, which serve as initial docking sites for trimethyl aluminum (TMA) molecules binding datively to the amine. Thereby, upon exposure to 8-hydroxyquinoline (8-HQ), the self-limiting formation of highly luminescent Alq3 monolayers is afforded. The growth process and monolayer formation were studied and verified by in situ quartz crystal monitoring, optical emission and absorption spectroscopy, and X-ray photoelectron spectroscopy. The nature of the MLD process provides an avenue to coat arbitrarily shaped 3D surfaces and porous structures with high surface areas, as demonstrated in this work for silica aerogels. The concept presented here paves the way to highly sensitive luminescent sensors and dye-sensitized metal oxides for future applications (e.g., in photocatalysis and solar cells).

  16. Cloud Effects on Ocean Mixed Layer in the Northeast Pacific Ocean

    DTIC Science & Technology

    1991-06-01

    examining this phenomenon is the disproportionate darkness of the long January nights (-16 hours). The greenhouse effect was particularly active...increase in entrainment velocity thereby deepening the mixed layer and cooling the ocean surface. The greenhouse effect had little significant impact...This result is similar to the results found in the short-term experiment of Event #1, where the greenhouse effect is the dominant factor on the MLD

  17. Craton destruction by subduction, collision or plume impingement? Comparisons of some representative cratons in the world

    NASA Astrophysics Data System (ADS)

    Wang, Zhensheng; Kusky, Timothy; Li, Xiaoyong; Wang, Xu; Fu, Jianmin; Yuan, Yuefeng; Zhu, Peimin

    2015-04-01

    The fact that cratonic lithosphere can be destructed has been demonstrated by numerous studies. However, the driving force of craton destruction and its mechanism are still unclear1,2. Subduction, collision and mantle plumes, the most important driving forces for most geological events, may also be responsible for craton destruction. However, their relationship in the destruction process including which of them is the major driving force and how they interact with each other is not understood sufficiently1,2. In this article, the North China Craton, North Atlantic Craton, Tanzania Craton, Wyoming Craton, Kaapvaal Craton, Yangtze Craton, Yilgarn Craton and Superior Craton are used as examples to study their difference and similarities during subduction, collision, or mantle plume impingement. The work is mainly based on comparison of their tectonic history, geophysical data, as well as xenolith chronology. It is suggested that large-scale craton destruction can be influenced by the interaction of subduction, collision and mantle plumes, acting to different degrees in different examples. Mantle plume related thermal action enhances the chemical stratification or layering of subcontinental lithospheric mantle (SCLM), which can form a weak-coupling mid lithosphere discontinuity (MLD) 3,4,5 and a lower denser SCLM below the MLD. Convergence (subduction and collision), especially when associated with slab rollback 6, leads to the regional thinning of the cratonic margin, which is subsequently linked by extension (mantle plume or slab rollback) related discontinuities. Continuous extension-related discontinuities extend upward to the MLD depth and cut off the shearing resistance from adjacent blocks. Next, the lower part of the chemically stratified SCLM in the cratonic interior is decoupled along the weakly coupled MLD and founders into the deep asthenosphere 7. Then the destruction of the rest of the lithosphere can be affected by upwelling related decompression melting and subduction related hydroweakening. Additionally, if the craton is surrounded by orogenic (mobile) belts, these, can absorb tectonic energy from collisions, may be aid in the preservation of the cratonic root 8. Kusky T., et al. (2007). Geological Society, London, Special Publications, 280(1): 331-343. Gao, S., et al. (2009). Chinese Science Bulletin, 54(19): 3367-3378. Thybo H., et al. (1997). Science, 275(5306): 1626-1629. Thybo H. (2006). Tectonophysics, 416(1): 53-79. Rader E. Et al. (2013). AGU Fall Meeting Abstracts, 2013, 8. Kusky T., et al. (2014). Tectonophysics, 3(630): 208-221. Chen L., et al. (2014). Geology, 42(3): 223-226. Lenardic, A. et al. (2000). Geophysical Research Letters, 27(8): 1235-1238.

  18. Hybrid Organic-Inorganic Films Grown Using Molecular Layer Deposition

    DTIC Science & Technology

    2011-03-01

    shown that zincone films based on DEZ and hydroquinone (HQ) have displayed some conductivity when alloyed with ZnO ALD films [35]. The schematic...11 Schematic showing the two-step reaction sequence for AB zincone MLD growth using diethylzinc (DEZ) and hydroquinone (HQ). The hybrid organic

  19. Seismic imaging of a mid-lithospheric discontinuity beneath Ontong Java Plateau

    NASA Astrophysics Data System (ADS)

    Tharimena, Saikiran; Rychert, Catherine A.; Harmon, Nicholas

    2016-09-01

    Ontong Java Plateau (OJP) is a huge, completely submerged volcanic edifice that is hypothesized to have formed during large plume melting events ∼90 and 120 My ago. It is currently resisting subduction into the North Solomon trench. The size and buoyancy of the plateau along with its history of plume melting and current interaction with a subduction zone are all similar to the characteristics and hypothesized mechanisms of continent formation. However, the plateau is remote, and enigmatic, and its proto-continent potential is debated. We use SS precursors to image seismic discontinuity structure beneath Ontong Java Plateau. We image a velocity increase with depth at 28 ± 4 km consistent with the Moho. In addition, we image velocity decreases at 80 ± 5 km and 282 ± 7 km depth. Discontinuities at 60-100 km depth are frequently observed both beneath the oceans and the continents. However, the discontinuity at 282 km is anomalous in comparison to surrounding oceanic regions; in the context of previous results it may suggest a thick viscous root beneath OJP. If such a root exists, then the discontinuity at 80 km bears some similarity to the mid-lithospheric discontinuities (MLDs) observed beneath continents. One possibility is that plume melting events, similar to that which formed OJP, may cause discontinuities in the MLD depth range. Plume-plate interaction could be a mechanism for MLD formation in some continents in the Archean prior to the onset of subduction.

  20. An assessment of phytoplankton primary productivity in the Arctic Ocean from satellite ocean color/in situ chlorophyll‐a based models

    PubMed Central

    Matrai, Patricia A.; Friedrichs, Marjorie A. M.; Saba, Vincent S.; Antoine, David; Ardyna, Mathieu; Asanuma, Ichio; Babin, Marcel; Bélanger, Simon; Benoît‐Gagné, Maxime; Devred, Emmanuel; Fernández‐Méndez, Mar; Gentili, Bernard; Hirawake, Toru; Kang, Sung‐Ho; Kameda, Takahiko; Katlein, Christian; Lee, Sang H.; Lee, Zhongping; Mélin, Frédéric; Scardi, Michele; Smyth, Tim J.; Tang, Shilin; Turpie, Kevin R.; Waters, Kirk J.; Westberry, Toby K.

    2015-01-01

    Abstract We investigated 32 net primary productivity (NPP) models by assessing skills to reproduce integrated NPP in the Arctic Ocean. The models were provided with two sources each of surface chlorophyll‐a concentration (chlorophyll), photosynthetically available radiation (PAR), sea surface temperature (SST), and mixed‐layer depth (MLD). The models were most sensitive to uncertainties in surface chlorophyll, generally performing better with in situ chlorophyll than with satellite‐derived values. They were much less sensitive to uncertainties in PAR, SST, and MLD, possibly due to relatively narrow ranges of input data and/or relatively little difference between input data sources. Regardless of type or complexity, most of the models were not able to fully reproduce the variability of in situ NPP, whereas some of them exhibited almost no bias (i.e., reproduced the mean of in situ NPP). The models performed relatively well in low‐productivity seasons as well as in sea ice‐covered/deep‐water regions. Depth‐resolved models correlated more with in situ NPP than other model types, but had a greater tendency to overestimate mean NPP whereas absorption‐based models exhibited the lowest bias associated with weaker correlation. The models performed better when a subsurface chlorophyll‐a maximum (SCM) was absent. As a group, the models overestimated mean NPP, however this was partly offset by some models underestimating NPP when a SCM was present. Our study suggests that NPP models need to be carefully tuned for the Arctic Ocean because most of the models performing relatively well were those that used Arctic‐relevant parameters. PMID:27668139

  1. Dynamical significance of tides over the Bay of Bengal

    NASA Astrophysics Data System (ADS)

    Bhagawati, Chirantan; Pandey, Suchita; Dandapat, Sumit; Chakraborty, Arun

    2018-06-01

    Tides play a significant role in the ocean surface circulations and vertical mixing thereby influencing the Sea Surface Temperatures (SST) as well. This, in turn, plays an important role in the global circulation when used as a lower boundary condition in a global atmospheric general circulation model. Therefore in the present study, the dynamics of tides over the Bay of Bengal (BoB) is investigated through numerical simulations using a high resolution (1/12°) Regional Ocean Modeling System (ROMS). Based on statistical analysis it is observed that incorporation of explicit tidal forcing improves the model performance in simulating the basin averaged monthly surface circulation features by 64% compared to the simulation without tides. The model simulates also Mixed Layer Depth (MLD) and SST realistically. The energy exchange between tidal oscillations and eddies leads to redistribution of surface kinetic energy density with a net decrease of 0.012 J m-3 in the western Bay and a net increase of 0.007 J m-3 in the eastern Bay. The tidal forcing also affects the potential energy anomaly and vertical mixing thereby leading to a fall in monthly MLD over the BoB. The mixing due to tides leads to a subsequent reduction in monthly SST and a corresponding reduction in surface heat exchange. These results from the numerical simulation using ROMS reveal that tides have a significant influence over the air-sea heat exchange which is the most important parameter for prediction of Tropical Cyclone frequency and its future variability over the BoB.

  2. [Mathematical abilities and executive function in children with attention deficit hyperactivity disorder and learning disabilities in mathematics].

    PubMed

    Miranda Casas, Ana; Meliá de Alba, Amanda; Marco Taverner, Rafaela

    2009-02-01

    Mathematical abilities and executive function in children with attention deficit hyperactivity disorder and learning disabilities in mathematics. Even though 26% of children with attention deficit hyperactivity disorder (ADHD) show a specific mathematic learning difficulty (MLD), the studies have been scarce. The present study had the following goals: 1) to study the profile related to cognitive and metacognitive skills implied in calculation and problem-solving in children with ADHD+MLD, and to compare them in children with ADHD, children with MLD, and children without problems; 2) to study the severity of the deficit in executive function (EF) in children with ADHD+MLD. Comparing the groups MLD, ADHD, ADHD+MLD, and children without problems, the results highlighted that children with ADHD+MLD showed a cognitive and metacognitive deficit in mathematic achievement. Furthermore, results showed a more severe deficit in the EF in children with ADHD+MLD.

  3. Elasticity of Pargasite Amphibole: A Hydrous Phase at Mid Lithospheric Discontinuity

    NASA Astrophysics Data System (ADS)

    Peng, Y.; Mookherjee, M.

    2017-12-01

    Mid Lithospheric Discontinuity (MLD) is characterized by a low shear wave velocity ( 3 to 10 %). In cratons, the depth of MLD varies between 80 and 100 km. The reduction of the shear wave velocity at MLD is similar to what is observed in the lithosphere-asthenosphere boundary (LAB). Such low velocity at MLD could be caused by partial melting, temperature induced grain boundary sliding, changes in the elastic anisotropy, and/or metasomatism which may lead to the formation of hydrous phases including mica and amphibole. Thus, it is clear that in order to assess the role of metasomatism at MLD, we need better constraints on the elasticity of hydrous phases. However, such elasticity data are scarce. In this study, we explore elasticity of pargasite amphibole [NaCa2(Mg4Al)(Si6Al2)O22(OH)2] using density functional theory (DFT) with local density approximation (LDA) and generalized gradient approximation (GGA). We find that the pressure-volume results can be adequately described by a finite strain equation with the bulk modulus, K0 being 102 and 85 GPa for LDA and GGA respectively. We also determined the full elastic constant tensor (Cij) using the finite difference method. The bulk modulus, K0 determined from the full elastic constant tensor is 104 GPa for LDA and 87 GPa for GGA. The shear modulus, G0 determined from the full elastic constant tensor is 64 GPa for LDA and 58 GPa for GGA. The bulk and shear moduli predicted with LDA are 5 and 1 % stiffer than the recent results [1]. In contrast, the bulk and shear moduli predicted with GGA are 12 and 10 % softer compared to the recent results [1]. The full elastic constant tensor for pargasite shows significant anisotropy. For instance, LDA predicts compressional (AVP) and shear (AVS) wave anisotropy of 22 and 20 % respectively. At higher pressure, elastic moduli stiffen. However, temperature is likely to have an opposite effect on the elasticity and this remains largely unknown for pargasite. Compared to the major mantle minerals, pargasite has softer elastic constants and significant anisotropy and may explain the reduction in shear wave velocity at MLD. Reference: [1] Brown, J. M., Abramson, E. H.,2016, Phys. Earth Planet. Int., 261, 161-171. Acknowledgement: This work is supported by US NSF award EAR 1639552.

  4. Electrophysiological Evidence for the Sources of the Masking Level Difference.

    PubMed

    Fowler, Cynthia G

    2017-08-16

    The purpose of this review article is to review evidence from auditory evoked potential studies to describe the contributions of the auditory brainstem and cortex to the generation of the masking level difference (MLD). A literature review was performed, focusing on the auditory brainstem, middle, and late latency responses used in protocols similar to those used to generate the behavioral MLD. Temporal coding of the signals necessary for generating the MLD occurs in the auditory periphery and brainstem. Brainstem disorders up to wave III of the auditory brainstem response (ABR) can disrupt the MLD. The full MLD requires input to the generators of the auditory late latency potentials to produce all characteristics of the MLD; these characteristics include threshold differences for various binaural signal and noise conditions. Studies using central auditory lesions are beginning to identify the cortical effects on the MLD. The MLD requires auditory processing from the periphery to cortical areas. A healthy auditory periphery and brainstem codes temporal synchrony, which is essential for the ABR. Threshold differences require engaging cortical function beyond the primary auditory cortex. More studies using cortical lesions and evoked potentials or imaging should clarify the specific cortical areas involved in the MLD.

  5. Water intake and beverage consumption of pre-schoolers from six European countries and associations with socio-economic status: the ToyBox-study.

    PubMed

    Pinket, An-Sofie; De Craemer, Marieke; Maes, Lea; De Bourdeaudhuij, Ilse; Cardon, Greet; Androutsos, Odysseas; Koletzko, Berthold; Moreno, Luis; Socha, Piotr; Iotova, Violeta; Manios, Yannis; Van Lippevelde, Wendy

    2016-09-01

    To study the quantity and quality of water intake from beverages among pre-schoolers and investigate associations with gender and socio-economic status (SES). Kindergarten-based cross-sectional survey within the large-scale European ToyBox-study. A standardized protocol was used and parents/caregivers filled in sociodemographic data and a semi-quantitative FFQ. Kindergartens in six European countries (Belgium, Bulgaria, Germany, Greece, Poland and Spain). European pre-schoolers (aged 3·5-5·5 years) and their parents/caregivers (n 7051). Mean water intake was 1051 ml/d; plain water, 547 ml/d; plain milk, 241 ml/d; other fruit juice, 104 ml/d; pure fruit juice, 59 ml/d; soft drinks, 55 ml/d; tea, 45 ml/d; sugared and chocolate milk, 37 ml/d; smoothies, 15 ml/d; and light soft drinks, 6 ml/d. Boys had a higher water intake than girls due to a higher consumption of plain water, but more importantly to the consumption of beverages of less quality. Lower-SES pre-schoolers scored better on quantity than high-SES pre-schoolers, but as a consequence of consumption of sugared beverages. Nevertheless, the associations differed by country. The water intake from beverages did not meet the European Food Safety Authority standard of 1280 ml/d; especially in Western European countries water intake from beverages was low. The most important water sources were plain water, milk and fruit juices. Interventions aiming at a proper and sufficient water intake should focus on both quantity and quality. Messages about water and water sources should be clear for everyone and interventions should be sufficiently tailored.

  6. Re-examining minimal luminal diameter relocation and quantitative coronary angiography--intravascular ultrasound correlations in stented saphenous vein grafts: methodological insights from the randomised RRISC trial.

    PubMed

    Semeraro, Oscar; Agostoni, Pierfrancesco; Verheye, Stefan; Van Langenhove, Glenn; Van den Heuvel, Paul; Convens, Carl; Van den Branden, Frank; Bruining, Nico; Vermeersch, Paul

    2009-03-01

    Angiographic parameters (such as late luminal loss) are common endpoints in drug-eluting stent trials, but their correlation with the neointimal process and their reliability in predicting restenosis are debated. Using quantitative coronary angiography (QCA) data (49 bare metal stent and 44 sirolimus-eluting stent lesions) and intravascular ultrasound (IVUS) data (39 bare metal stent and 34 sirolimus-eluting stent lesions) from the randomised Reduction of Restenosis In Saphenous vein grafts with Cypher stent (RRISC) trial, we analysed the "relocation phenomenon" of QCA-based in-stent minimal luminal diameter (MLD) between post-procedure and follow-up and we correlated QCA-based and IVUS-based restenotic parameters in stented saphenous vein grafts. We expected the presence of MLD relocation for low late loss values, as MLD can "migrate" along the stent if minimal re-narrowing occurs, while we anticipated follow-up MLD to be located close to post-procedural MLD position for higher late loss. QCA-based MLD relocation occurred frequently: the site of MLD shifted from post-procedure to follow-up an "absolute" distance of 5.8 mm [2.5-10.2] and a "relative" value of 29% [10-46]. MLD relocation failed to correlate with in-stent late loss (rho = 0.14 for "absolute" MLD relocation [p = 0.17], and rho=0.03 for "relative" relocation [p = 0.811). Follow-up QCA-based and IVUS-based MLD values well correlated in the overall population (rho = 0.76, p < 0.001), but QCA underestimated MLD on average 0.55 +/- 0.49 mm, and this was mainly evident for lower MLD values. Conversely, the location of QCA-based MLD failed to correlate with the location of IVUS-based MLD (rho = 0.01 for "absolute" values--in mm [p = 0.911, rho = 0.19 for "relative" values--in % [p = 0.111). Overall, the ability of late loss to "predict" IVUS parameters of restenosis (maximum neointimal hyperplasia diameter, neointimal hyperplasia index and maximum neointimal hyperplasia area) was moderate (rho between 0.46 and 0.54 for the 3 IVUS parameters). These findings suggest the need for a critical re-evaluation of angiographic parameters (such as late loss) as endpoints for drug-eluting stent trials and the use of more precise techniques to describe accurately and properly the restenotic process.

  7. Effects of Model Resolution and Ocean Mixing on Forced Ice-Ocean Physical and Biogeochemical Simulations Using Global and Regional System Models

    NASA Astrophysics Data System (ADS)

    Jin, Meibing; Deal, Clara; Maslowski, Wieslaw; Matrai, Patricia; Roberts, Andrew; Osinski, Robert; Lee, Younjoo J.; Frants, Marina; Elliott, Scott; Jeffery, Nicole; Hunke, Elizabeth; Wang, Shanlin

    2018-01-01

    The current coarse-resolution global Community Earth System Model (CESM) can reproduce major and large-scale patterns but is still missing some key biogeochemical features in the Arctic Ocean, e.g., low surface nutrients in the Canada Basin. We incorporated the CESM Version 1 ocean biogeochemical code into the Regional Arctic System Model (RASM) and coupled it with a sea-ice algal module to investigate model limitations. Four ice-ocean hindcast cases are compared with various observations: two in a global 1° (40˜60 km in the Arctic) grid: G1deg and G1deg-OLD with/without new sea-ice processes incorporated; two on RASM's 1/12° (˜9 km) grid R9km and R9km-NB with/without a subgrid scale brine rejection parameterization which improves ocean vertical mixing under sea ice. Higher-resolution and new sea-ice processes contributed to lower model errors in sea-ice extent, ice thickness, and ice algae. In the Bering Sea shelf, only higher resolution contributed to lower model errors in salinity, nitrate (NO3), and chlorophyll-a (Chl-a). In the Arctic Basin, model errors in mixed layer depth (MLD) were reduced 36% by brine rejection parameterization, 20% by new sea-ice processes, and 6% by higher resolution. The NO3 concentration biases were caused by both MLD bias and coarse resolution, because of excessive horizontal mixing of high NO3 from the Chukchi Sea into the Canada Basin in coarse resolution models. R9km showed improvements over G1deg on NO3, but not on Chl-a, likely due to light limitation under snow and ice cover in the Arctic Basin.

  8. Cognitive subtypes of mathematics learning difficulties in primary education.

    PubMed

    Bartelet, Dimona; Ansari, Daniel; Vaessen, Anniek; Blomert, Leo

    2014-03-01

    It has been asserted that children with mathematics learning difficulties (MLD) constitute a heterogeneous group. To date, most researchers have investigated differences between predefined MLD subtypes. Specifically MLD children are frequently categorized a priori into groups based on the presence or absence of an additional disorder, such as a reading disorder, to examine cognitive differences between MLD subtypes. In the current study 226 third to six grade children (M age=131 months) with MLD completed a selection of number specific and general cognitive measures. The data driven approach was used to identify the extent to which performance of the MLD children on these measures could be clustered into distinct groups. In particular, after conducting a factor analysis, a 200 times repeated K-means clustering approach was used to classify the children's performance. Results revealed six distinguishable clusters of MLD children, specifically (a) a weak mental number line group, (b) weak ANS group, (c) spatial difficulties group, (d) access deficit group, (e) no numerical cognitive deficit group and (f) a garden-variety group. These findings imply that different cognitive subtypes of MLD exist and that these can be derived from data-driven approaches to classification. These findings strengthen the notion that MLD is a heterogeneous disorder, which has implications for the way in which intervention may be tailored for individuals within the different subtypes. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. Evaluation of an automated milk leukocyte differential test and the California Mastitis Test for detecting intramammary infection in early- and late-lactation quarters and cows.

    PubMed

    Godden, S M; Royster, E; Timmerman, J; Rapnicki, P; Green, H

    2017-08-01

    Study objectives were to (1) describe the diagnostic test characteristics of an automated milk leukocyte differential (MLD) test and the California Mastitis Test (CMT) to identify intramammary infection (IMI) in early- (EL) and late-lactation (LL) quarters and cows when using 3 different approaches to define IMI from milk culture, and (2) describe the repeatability of MLD test results at both the quarter and cow level. Eighty-six EL and 90 LL Holstein cows were sampled from 3 Midwest herds. Quarter milk samples were collected for a cow-side CMT test, milk culture, and MLD testing. Quarter IMI status was defined by 3 methods: culture of a single milk sample, culture of duplicate samples with parallel interpretation, and culture of duplicate samples with serial interpretation. The MLD testing was completed in duplicate within 8 h of sample collection; MLD results (positive/negative) were reported at each possible threshold setting (1-18 for EL; 1-12 for LL) and CMT results (positive/negative) were reported at each possible cut-points (trace, ≥1, ≥2, or 3). We created 2 × 2 tables to compare MLD and CMT results to milk culture, at both the quarter and cow level, when using each of 3 different definitions of IMI as the referent test. Paired MLD test results were compared with evaluate repeatability. The MLD test showed excellent repeatability. The choice of definition of IMI from milk culture had minor effects on estimates of MLD and CMT test characteristics. For EL samples, when interpreting MLD and CMT results at the quarter level, and regardless of the referent test used, both tests had low sensitivity (MLD = 11.7-39.1%; CMT = 0-52.2%) but good to very good specificity (MLD = 82.1-95.2%; CMT = 68.1-100%), depending on the cut-point used. Sensitivity improved slightly if diagnosis was interpreted at the cow level (MLD = 25.6-56.4%; CMT = 0-72.2%), though specificity generally declined (MLD = 61.8-100%; CMT = 25.0-100%) depending on the cut-point used. For LL samples, when interpreted at the quarter level, both tests had variable sensitivity (MLD = 46.6-84.8%; CMT = 9.6-72.7%) and variable specificity (MLD = 59.2-79.8%; CMT = 52.5-97.3%), depending on the cut-point used. Test sensitivity improved if interpreted at the cow level (MLD = 59.6-86.4%; CMT = 19.1-86.4%), though specificity declined (MLD = 32.4-56.8%; CMT = 14.3-92.3%). Producers considering adopting either test for LL or EL screening programs will need to carefully consider the goals and priorities of the program (e.g., whether to prioritize test sensitivity or specificity) when deciding on the level of interpretation (quarter or cow) and when selecting the optimal cut-point for interpreting test results. Additional validation studies and large randomized field studies will be needed to evaluate the effect of adopting either test in selective dry cow therapy or fresh cow screening programs on udder health, antibiotic use, and economics. The Authors. Published by the Federation of Animal Science Societies and Elsevier Inc. on behalf of the American Dairy Science Association®. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).

  10. Using milk leukocyte differentials for diagnosis of subclinical bovine mastitis.

    PubMed

    Gonçalves, Juliano Leonel; Lyman, Roberta L; Hockett, Mitchell; Rodriguez, Rudy; Dos Santos, Marcos Veiga; Anderson, Kevin L

    2017-08-01

    This research study aimed to evaluate the use of the milk leukocyte differential (MLD) to: (a) identify quarter milks that are culture-positive; and (b) characterize the milk leukocyte responses to specific groups of pathogens causing subclinical mastitis. The MLD measures the absolute number and relative percentage of inflammatory cells in milk samples. Using the MLD in two dairy herds (170 and 172 lactating cows, respectively), we studied all lactating cows with a most recent monthly Dairy Herd Improvement Association somatic cell count (SCC) >200 × 103 cells/ml. Quarter milk samples from 78 cows meeting study criteria were analysed by MLD and aseptically collected milk samples were subjected to microbiological culture (MC). Based upon automated instrument evaluation of the number and percentage of inflammatory cells in milk, samples were designated as either MLD-positive or - negative for subclinicial mastitis. Positive MC were obtained from 102/156 (65·4%) of MLD-positive milk samples, and 28/135 (20·7%) of MLD-negative milk samples were MC-positive. When MC was considered the gold standard for mastitis diagnosis, the calculated diagnostic Se of the MLD was 65·4% (IC95% = 57·4 to 72·8%) and the Sp was 79·3% (IC95% = 71·4 to 85·7%). Quarter milks positive on MC had higher absolute numbers of neutrophils, lymphocytes and macrophages, with higher neutrophils% and lymphocytes% but lower macrophages%. The Log10 (N/L) ratios were the most useful ratio to differentiate specific subclinical mastitis quarters from healthy quarters. Use of the MLD on cows with monthly composite SCC > 200 × 103 cells/ml for screening at quarter level identified quarters more likely to be culture-positive. In conclusion, the MLD can provide an analysis of mammary quarter status more detailed than provided by SCC alone; however, the MLD response to subclinical mastitis was not found useful to specifically identify the causative pathogen.

  11. Kindergarten Predictors of Math Learning Disability

    PubMed Central

    Mazzocco, Michèle M. M.; Thompson, Richard E.

    2009-01-01

    The aim of the present study was to address how to effectively predict mathematics learning disability (MLD). Specifically, we addressed whether cognitive data obtained during kindergarten can effectively predict which children will have MLD in third grade, whether an abbreviated test battery could be as effective as a standard psychoeducational assessment at predicting MLD, and whether the abbreviated battery corresponded to the literature on MLD characteristics. Participants were 226 children who enrolled in a 4-year prospective longitudinal study during kindergarten. We administered measures of mathematics achievement, formal and informal mathematics ability, visual-spatial reasoning, and rapid automatized naming and examined which test scores and test items from kindergarten best predicted MLD at grades 2 and 3. Statistical models using standardized scores from the entire test battery correctly classified ~80–83 percent of the participants as having, or not having, MLD. Regression models using scores from only individual test items were less predictive than models containing the standard scores, except for models using a specific subset of test items that dealt with reading numerals, number constancy, magnitude judgments of one-digit numbers, or mental addition of one-digit numbers. These models were as accurate in predicting MLD as was the model including the entire set of standard scores from the battery of tests examined. Our findings indicate that it is possible to effectively predict which kindergartners are at risk for MLD, and thus the findings have implications for early screening of MLD. PMID:20084182

  12. Arithmetic strategy development and its domain-specific and domain-general cognitive correlates: a longitudinal study in children with persistent mathematical learning difficulties.

    PubMed

    Vanbinst, Kiran; Ghesquière, Pol; De Smedt, Bert

    2014-11-01

    Deficits in arithmetic fact retrieval constitute the hallmark of children with mathematical learning difficulties (MLD). It remains, however, unclear which cognitive deficits underpin these difficulties in arithmetic fact retrieval. Many prior studies defined MLD by considering low achievement criteria and not by additionally taking the persistence of the MLD into account. Therefore, the present longitudinal study contrasted children with persistent MLD (MLD-p; mean age: 9 years 2 months) and typically developing (TD) children (mean age: 9 years 6 months) at three time points, to explore whether differences in arithmetic strategy development were associated with differences in numerical magnitude processing, working memory and phonological processing. Our longitudinal data revealed that children with MLD-p had persistent arithmetic fact retrieval deficits at each time point. Children with MLD-p showed persistent impairments in symbolic, but not in nonsymbolic, magnitude processing at each time point. The two groups differed in phonological processing, but not in working memory. Our data indicate that both domain-specific and domain-general cognitive abilities contribute to individual differences in children's arithmetic strategy development, and that the symbolic processing of numerical magnitudes might be a particular risk factor for children with MLD-p. Copyright © 2014 Elsevier Ltd. All rights reserved.

  13. Patterns of coccolithophore pigment change under global acidification conditions based on in-situ observations at BATS site between July 1990-Dec 2008

    NASA Astrophysics Data System (ADS)

    Lv, Jianhai; Kuang, Yaoqiu; Zhao, Hui; Andersson, Andreas

    2017-06-01

    Coccolith production is an important part of the biogenic carbon cycle as the largest source of calcium carbonate on earth, accounting for about 75% of the deposition of carbon on the sea floor. Recent studies based on laboratory experiment results indicated that increasing anthropogenic CO2 in the atmosphere triggered global ocean acidification leading to a decrease of calcite or aragonite saturation and calcium carbonate, and to decreasing efficiency of carbon export/pumping to deep layers. In the present study, we analyzed about 20 years of field observations of coccolithophore pigment, dissolved inorganic carbon (DIC), nutrients, and temperatures from the Bermuda Atlantic Time-series Study (BATS) site and satellite remote sensing to investigate the variable tendency of the coccolithophore pigment, and to evaluate the influence of ocean acidification on coccolithophore biomass. The results indicated that there was a generally increasing tendency of coccolithophore pigment, coupled with increasing bicarbonate concentrations or decreasing carbonate ion concentration. The change of coccolithophore pigment was also closely associated with pH, nutrients, mixed layer depth (MLD), and temperature. Correlation analyses between coccolithophores and abiotic parameter imply that coccoliths production or coccolithophore pigment has increased with increasing acidification in the recent 20 years.

  14. Mathematical Learning Disabilities in Special Populations: Phenotypic Variation and Cross-Disorder Comparisons

    PubMed Central

    Dennis, Maureen; Berch, Daniel B.; Mazzocco, Michèle M.M.

    2011-01-01

    What is mathematical learning disability (MLD)? The reviews in this special issue adopt different approaches to defining the construct of MLD. Collectively, they demonstrate the current status of efforts to establish a consensus definition and the challenges faced in this endeavor. In this commentary, we reflect upon the proposed pathways to mathematical learning difficulties and disabilities presented across the reviews. Specifically we consider how each of the reviews contributes to identifying the MLD phenotype by specifying the range of assets and deficits in mathematics, identifying sources of individual variation, and characterizing the natural progression of MLD over the life course. We show how principled comparisons across disorders address issues about the cognitive and behavioral co-morbidities of MLD, and whether commonalities in brain dysmorphology are associated with common mathematics performance profiles. We project the status of MLD research ten years hence with respect to theoretical gains, advances in methodology, and principled intervention studies. PMID:19213019

  15. Constraints on the Chemistry and Abundance of Hydrous Phases in Sub Continental Lithospheric Mantle: Implications for Mid-Lithospheric Discontinuities

    NASA Astrophysics Data System (ADS)

    Saha, S.; Dasgupta, R.; Fischer, K. M.; Mookherjee, M.

    2017-12-01

    The origins of a 2-10% reduction in seismic shear wave velocity (Vs) at depths of 60-160 km in sub continental lithospheric mantle (SCLM) regions, identified as the Mid Lithospheric Discontinuity (MLD) [e.g., 1] are highly debated [e.g., 2, 3]. One of the proposed explanations for MLDs is the presence of hydrous minerals such as amphibole and phlogopite at these depths [e.g., 2, 4, 5]. Although the stability and compositions of these phases in peridotite + H2O ± CO2 have been widely explored [e.g., 6], their composition and abundance as a function of permissible SCLM chemistry remain poorly understood. We have compiled phase equilibria experiments conducted over a range of pressure (0.5-8 GPa), temperature (680-1300 °C), major element peridotite compositions, and volatiles (H2O: 0.05-13.79 wt.% and CO2: 0.25-5.3 wt.%). The goal was to constrain how compositional parameters such as CaO and alkali/H2O affect the chemistry and abundance of amphibole and phlogopite. We observe that the abundance of amphibole increases with CaO content and decreasing alkali/H2O. The abundance of phlogopite varies directly with K2O content. Unlike phlogopite compositions that remain consistent, amphibole compositions show variability (pargastitic to K-richterite) depending on bulk CaO and Na2O. Mineral modes, obtained by mass balance on a melt/fluid free basis, were used to calculate aggregate shear wave velocity, Vs for the respective assemblages [e.g., 7] and compared with absolute values observed at MLD depths [e.g., 8]. Vs shows a strong inverse correlation with phlogopite and amphibole modes (particularly where phlogopite is absent). For the Mg# range of cratonic xenoliths, 5-10% phlogopite at MLD depths can match the observed Vs values, while CaO contents in cratonic xenoliths limit the amphibole abundance to 10%, which is lower than previous estimates based on heat flow calculations [e.g., 4]. The modes of hydrous and other phases and corresponding Vs values could be used to identify the process of volatile introduction such that the origin of MLDs could be linked to models of craton formation. [1] Abt et al., 2010, JGR; [2] Rader et al., 2015, G3; [3] Karato et al., 2015, NatGeo; [4] Selway et al., 2015, EPSL; [5] Saha et al., submitted, G3; [6] Mandler and Grove, 2016, CMP; [7] Abers & Hacker, 2016, G3 [8] Hirsch et al., 2015, G3.

  16. Effect of Normal Lung Definition on Lung Dosimetry and Lung Toxicity Prediction in Radiation Therapy Treatment Planning

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Weili; Department of Radiation Oncology, the Fourth Affiliated Hospital, China Medical University, Shenyang; Xu, Yaping

    2013-08-01

    Purpose: This study aimed to compare lung dose–volume histogram (DVH) parameters such as mean lung dose (MLD) and the lung volume receiving ≥20 Gy (V20) of commonly used definitions of normal lung in terms of tumor/target subtraction and to determine to what extent they differ in predicting radiation pneumonitis (RP). Methods and Materials: One hundred lung cancer patients treated with definitive radiation therapy were assessed. The gross tumor volume (GTV) and clinical planning target volume (PTV{sub c}) were defined by the treating physician and dosimetrist. For this study, the clinical target volume (CTV) was defined as GTV with 8-mm uniformmore » expansion, and the PTV was defined as CTV with an 8-mm uniform expansion. Lung DVHs were generated with exclusion of targets: (1) GTV (DVH{sub G}); (2) CTV (DVH{sub C}); (3) PTV (DVH{sub P}); and (4) PTV{sub c} (DVH{sub Pc}). The lung DVHs, V20s, and MLDs from each of the 4 methods were compared, as was their significance in predicting radiation pneumonitis of grade 2 or greater (RP2). Results: There are significant differences in dosimetric parameters among the various definition methods (all Ps<.05). The mean and maximum differences in V20 are 4.4% and 12.6% (95% confidence interval 3.6%-5.1%), respectively. The mean and maximum differences in MLD are 3.3 Gy and 7.5 Gy (95% confidence interval, 1.7-4.8 Gy), respectively. MLDs of all methods are highly correlated with each other and significantly correlated with clinical RP2, although V20s are not. For RP2 prediction, on the receiver operating characteristic curve, MLD from DVH{sub G} (MLD{sub G}) has a greater area under curve of than MLD from DVH{sub C} (MLD{sub C}) or DVH{sub P} (MLD{sub P}). Limiting RP2 to 30%, the threshold is 22.4, 20.6, and 18.8 Gy, for MLD{sub G}, MLD{sub C}, and MLD{sub P}, respectively. Conclusions: The differences in MLD and V20 from various lung definitions are significant. MLD from the GTV exclusion method may be more accurate in predicting clinical significant radiation pneumonitis.« less

  17. Cognitive characteristics of children with mathematics learning disability (MLD) vary as a function of the cutoff criterion used to define MLD.

    PubMed

    Murphy, Melissa M; Mazzocco, Michèle M M; Hanich, Laurie B; Early, Martha C

    2007-01-01

    Researchers of mathematics learning disability (MLD) commonly use cutoff scores to determine which participants have MLD. Some researchers apply more restrictive cutoffs than others (e.g., performance below the 10th vs. below the 35th percentile). Different cutoffs may lead to groups of children that differ in their profile of math and related skills, including reading, visual-spatial, and working memory skills. The present study assesses the characteristics of children with MLD based on varying MLD definitions of math performance either below the 10th percentile (n = 22) or between the 11th and 25th percentile (n = 42) on the Test of Early Math Ability, second edition (TEMA-2). Initial starting levels and growth rates for math and related skills were examined in these two MLD groups relative to a comparison group (n = 146) whose TEMA-2 performance exceeded the 25th percentile. Between kindergarten and third grade, differences emerged in the starting level and growth rate, suggesting qualitative differences among the three groups. Despite some similarities, qualitative group differences were also observed in the profiles of math-related skills across groups. These results highlight differences in student characteristics based on the definition of MLD and illustrate the value of examining skill areas associated with math performance in addition to math performance itself.

  18. [Total drinking water intake and sources of children and adolescent in one district of Shenzhen].

    PubMed

    Du, Songming; Hu, Xiaoqi; Zhang, Qian; Wang, Xiaojun; Liu, Ailing; Pan, Hui; He, Shuang; Ma, Guansheng

    2013-05-01

    To describe total drinking water intake among primary and middle school students in one district of Shenzhen and to provide scientific evidence for adequate intakes of drinking water for different people in China. A total of 816 students from three primary and middle schools of Shenzhen was selected using three-stage random sampling method. The information on amounts and types of daily drinking water was recorded by subjects for seven consecutive days using a 24 hours measurement. The amounts and types of daily drinking water among different ages and between boys and girls were analyzed. The average total drinking water of subjects was (1225+/-557) ml/d, and the consumption of total drinking water in boys ((1303+/-639) ml/d) was significantly higher than that in girls ((1134+/-478) ml/d, P<0.01). The consumption of total drinking water of secondary school students ((1389+/-541) ml/d) and high school student ((1318+/-641) ml/d) was no statistically difference, but was higher than primary school students ((1097+/-525) ml/d, P<0.01). The average plain water and beverages of the subjects was (818+/-541) ml/d and (407+/-294) ml/d respectively. Major of fluid intake comes from drinking water in children and adolescenct of Shenzhen. The knowledge of drinking water of primary school students is need to comprehensive enough.

  19. Stable measures of number sense accuracy in math learning disability: Is it time to proceed from basic science to clinical application?

    PubMed

    Júlio-Costa, Annelise; Starling-Alves, Isabella; Lopes-Silva, Júlia Beatriz; Wood, Guilherme; Haase, Vitor Geraldi

    2015-12-01

    Math learning disability (MLD) or developmental dyscalculia is a highly prevalent and persistent difficulty in learning arithmetic that may be explained by different cognitive mechanisms. The accuracy of the number sense has been implicated by some evidence as a core deficit in MLD. However, research on this topic has been mainly conducted in demographically selected samples, using arbitrary cut-off scores to characterize MLD. The clinical relevance of the association between number sense and MLD remains to be investigated. In this study, we aimed at assessing the stability of a number sense accuracy measure (w) across five experimental sessions, in two clinically defined cases of MLD. Stable measures of number sense accuracy estimate are required to clinically characterize subtypes of MLD and to make theoretical inferences regarding the underlying cognitive mechanisms. G. A. was a 10-year-old boy with MLD in the context of dyslexia and phonological processing impairment and his performance remained steadily in the typical scores range. The performance of H. V., a 9-year-old girl with MLD associated with number sense inaccuracy, remained consistently impaired across measurements, with a nonsignificant tendency to worsen. Qualitatively, H. V.'s performance was also characterized by greater variability across sessions. Concomitant clinical observations suggested that H. V.'s difficulties could be aggravated by developing symptoms of mathematics anxiety. Results in these two cases are in line with the hypotheses that at least two reliable patterns of cognitive impairment may underlie math learning difficulties in MLD, one related to number sense inaccuracy and the other to phonological processing impairment. Additionally, it indicates the need for more translational research in order to examine the usefulness and validity of theoretical advances in numerical cognition to the clinical neuropsychological practice with MLD. © 2015 The Institute of Psychology, Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

  20. Simulating Conditional Deterministic Predictability within Ocean Frontogenesis

    DTIC Science & Technology

    2014-03-26

    Prediction System (COAMPS; Hodur, 1997) across the inner domain. The surface wind stress is determined from the atmo- spheric model wind velocity...layers on the light side of the front. Increasing the strength of the down-front wind increases the frontogenesis. Mahadevan and Tandon (2006) showed...Filaments of shallow MLD, large frontogenesis and large surface divergence ( upwelling ) are found in the OSEs, but at different locations and strengths . The

  1. Building Knowledge Structures by Testing Helps Children with Mathematical Learning Difficulty

    ERIC Educational Resources Information Center

    Zhang, Yiyun; Zhou, Xinlin

    2016-01-01

    Mathematical learning difficulty (MLD) is prevalent in the development of mathematical abilities. Previous interventions for children with MLD have focused on number sense or basic mathematical skills. This study investigated whether mathematical performance of fifth grade children with MLD could be improved by developing knowledge structures by…

  2. Master Logic Diagram: method for hazard and initiating event identification in process plants.

    PubMed

    Papazoglou, I A; Aneziris, O N

    2003-02-28

    Master Logic Diagram (MLD), a method for identifying events initiating accidents in chemical installations, is presented. MLD is a logic diagram that resembles a fault tree but without the formal mathematical properties of the latter. MLD starts with a Top Event "Loss of Containment" and decomposes it into simpler contributing events. A generic MLD has been developed which may be applied to all chemical installations storing toxic and/or flammable substances. The method is exemplified through its application to an ammonia storage facility.

  3. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Berger, J.; Loeschl, B.; Bernheimer, H.

    Occurrence, distribution, and phenotype of arylsulfatase A (ASA) mutations were investigated in 27 patients with metachromatic leukodystrophy (MLD) from Central Europe, mainly from Austria (n = 15) and Poland (n = 9). Genomic DNA from leukocytes, fibroblasts, or paraffin-embedded, formalin-fixed brain or nerve tissue, respectively, was tested by natural or mutated primer-modulated PCR restriction fragment length polymorphism for the eight most common European mutations: R84Q, S96F, 459+1G>A, I179S, A212V, 1204+1G>A, P426L, and 1401del11bp. The overall identification rate of unrelated MLD alleles was the highest in adult (90%), medium in juvenile (50%), and lowest in late infantile (36%) MLD patients. Themore » two common alleles, 459+1G>A and P426L, together accounted for 42% of all 50 unrelated MLD alleles investigated; I179S was observed in 6 of 50 MLD alleles (12%). Thus, I179S was far more frequent than hitherto thought and appears to be a third common mutation in Europe. Moreover, a different allelic distribution between Austrian and Polish juvenile patients was disclosed, indicating genetic heterogeneity of MLD even within Central Europe. The genotype-phenotype correlation suggested by Polten et al. was not followed by all of our MLD patients. Moreover, some MLD patients with identical ASA mutations presented with different phenotypes. This may be due, at least in some cases, to the presence of an additional mutation on individual mutant alleles. Therefore, prediction of the clinical course from single mutation analysis is not possible. 28 refs.« less

  4. Lithospheric discontinuities beneath the U.S. Midcontinent - signatures of Proterozoic terrane accretion and failed rifting

    NASA Astrophysics Data System (ADS)

    Chen, Chen; Gilbert, Hersh; Fischer, Karen M.; Andronicos, Christopher L.; Pavlis, Gary L.; Hamburger, Michael W.; Marshak, Stephen; Larson, Timothy; Yang, Xiaotao

    2018-01-01

    Seismic discontinuities between the Moho and the inferred lithosphere-asthenosphere boundary (LAB) are known as mid-lithospheric discontinuities (MLDs) and have been ascribed to a variety of phenomena that are critical to understanding lithospheric growth and evolution. In this study, we used S-to-P converted waves recorded by the USArray Transportable Array and the OIINK (Ozarks-Illinois-Indiana-Kentucky) Flexible Array to investigate lithospheric structure beneath the central U.S. This region, a portion of North America's cratonic platform, provides an opportunity to explore how terrane accretion, cratonization, and subsequent rifting may have influenced lithospheric structure. The 3D common conversion point (CCP) volume produced by stacking back-projected Sp receiver functions reveals a general absence of negative converted phases at the depths of the LAB across much of the central U.S. This observation suggests a gradual velocity decrease between the lithosphere and asthenosphere. Within the lithosphere, the CCP stacks display negative arrivals at depths between 65 km and 125 km. We interpret these as MLDs resulting from the top of a layer of crystallized melts (sill-like igneous intrusions) or otherwise chemically modified lithosphere that is enriched in water and/or hydrous minerals. Chemical modification in this manner would cause a weak layer in the lithosphere that marks the MLDs. The depth and amplitude of negative MLD phases vary significantly both within and between the physiographic provinces of the midcontinent. Double, or overlapping, MLDs can be seen along Precambrian terrane boundaries and appear to result from stacked or imbricated lithospheric blocks. A prominent negative Sp phase can be clearly identified at 80 km depth within the Reelfoot Rift. This arrival aligns with the top of a zone of low shear-wave velocities, which suggests that it marks an unusually shallow seismic LAB for the midcontinent. This boundary would correspond to the top of a region of mechanically and chemically rejuvenated mantle that was likely emplaced during late Precambrian/early Cambrian rifting. These observations suggest that the lithospheric structure beneath the Reelfoot Rift may be an example of a global phenomenon in which MLDs act as weak zones that facilitate the removal of cratonic lithosphere that lies beneath.

  5. Ancient Continental Lithosphere Dislocated Beneath Ocean Basins Along the Mid-Lithosphere Discontinuity: A Hypothesis

    NASA Astrophysics Data System (ADS)

    Wang, Zhensheng; Kusky, Timothy M.; Capitanio, Fabio A.

    2017-09-01

    The documented occurrence of ancient continental cratonic roots beneath several oceanic basins remains poorly explained by the plate tectonic paradigm. These roots are found beneath some ocean-continent boundaries, on the trailing sides of some continents, extending for hundreds of kilometers or farther into oceanic basins. We postulate that these cratonic roots were left behind during plate motion, by differential shearing along the seismically imaged mid-lithosphere discontinuity (MLD), and then emplaced beneath the ocean-continent boundary. Here we use numerical models of cratons with realistic crustal rheologies drifting at observed plate velocities to support the idea that the mid-lithosphere weak layer fostered the decoupling and offset of the African continent's buoyant cratonic root, which was left behind during Meso-Cenozoic continental drift and emplaced beneath the Atlantic Ocean. We show that in some cratonic areas, the MLD plays a similar role as the lithosphere-asthenosphere boundary for accommodating lateral plate tectonic displacements.

  6. Impact of effective ocean optical properties on the Pacific subtropical cell: a CGCM study

    NASA Astrophysics Data System (ADS)

    Yamanaka, G.; Tsujino, H.; Ishizaki, H.; Nakano, H.; Hirabara, M.

    2012-12-01

    The choice of ocean radiant scheme is important for modeling the upper ocean. According to the ocean-only simulation (Yamanaka et al., 2012), introduction of the chlorophyll-a dependent ocean radiant scheme results in the decreased mixed layer depth (MLD), the enhanced subtropical cell (STC), and the cooling of the eastern tropical Pacific sea surface temperature (SST). They also found that the enhanced STC results from the velocity profile change associated with the decreased Ekman boundary layer. However, the impact is not well understood when the air-sea feedback process is at work. This study examines the impact of the effective ocean optical properties on the Pacific mean fields, especially focusing on the STC, using a coupled general circulation model (CGCM). The CGCM we employed is the Meteorological Research Institute Earth System Model (MRI-ESM1). The atmospheric model is TL159L48, and the ocean model has a horizontal resolution of 1 x 0.5 deg. with 51 levels in vertical. Experimental design basically follows the CMIP5 protocol. Two experiments (CTL and SLR runs) are performed to investigate the impact of the effective ocean optical properties. In the CTL run, a conventional ocean radiant heating scheme (Paul and Simpson, 1977) is used, whereas a new ocean radiant heating scheme is used in the SLR run, where the satellite-derived chlorophyll-a distribution is taken into consideration based on Morel and Antoine (1994) as well as the effect of the varying solar angle (Ishizaki and Yamanaka, 2010). Each experiment is integrated during the period from 1985 to 2005. It is found that introduction of the new ocean radiant scheme (SLR run) changes the long-term mean wind pattern in the Pacific: easterly winds are strengthened in the equatorial Pacific, but weakened in the off-equatorial region. In the tropical Pacific, the enhanced equatorial upwelling cools the equatorial SST and the MLD becomes shallower. This is similar to the ocean-only simulation, but is more reinforced due to the Bjerknes feedback. On the other hand, unlike the ocean-only simulation, the STC is enhanced only in the equatorial band from 5 S to 5 N. Analysis of meridional volume transport in the upper 300 m indicates that poleward Ekman transport forced by the enhanced trade winds is balanced by the interior flow in the equatorial region. Apart from the equatorial region, the decreased Ekman transport due to the decreased easterly wind weakens the increased poleward transport associated with the velocity profile change in the Ekman boundary layer.

  7. Comparison of Euphausia superba, Euphausia crystallorophias, Pleuragramma antarcticum and Environmental Distributions in the Western Ross Sea

    NASA Astrophysics Data System (ADS)

    Davis, L.; Hofmann, E. E.; Klinck, J. M., II; Dinniman, M.; Pinones, M. A.

    2016-02-01

    Distributions of Antarctic krill (Euphausia superba), crystal krill (Euphausia crystallorophias), and Antarctic silverfish (Pleuragramma antarcticum) were constructed using observations collected in the western Ross Sea from 1988-2004. Distributions of mixed layer depth (MLD), water temperature below 200 m (an indicator for Circumpolar Deep Water, CDW), and surface speed were obtained from a Ross Sea circulation model; surface chlorophyll and percent sea ice coverage were obtained from satellite observations. The species and environmental distributions were analyzed to determine patterns and correlations. Statistical analyses of the distributions show that the three species are concentrated in specific regions and that their habitats have limited overlap. Antarctic krill are concentrated along the shelf break near Cape Adare and are associated with temperatures >0.5°C and -2°C to -0.75°C, 19-32% sea ice coverage, and high surface flow speeds. Crystal krill are concentrated in Terra Nova Bay in areas with depths of 400-600 m, temperatures < -1.3°, 50% or more sea ice coverage, shallow MLDs (2-36 m), moderate concentrations of chlorophyll (0.44 μg m-3) and low surface speeds (0.08 m s-1). Similarly, Antarctic silverfish are concentrated in Terra Nova Bay and are also found over the continental shelf in areas with depths of 500 m and temperatures of -2°C to -1°C. Additional statistical analyses provide insights into the relative contribution of the different environmental features to producing the distributions of the three species.

  8. Manual Lymphatic Drainage and Active Exercise Effects on Lymphatic Function Do Not Translate Into Morbidities in Women Who Underwent Breast Cancer Surgery.

    PubMed

    Freire de Oliveira, Mariana Maia; Costa Gurgel, Maria Salete; Pace do Amaral, Maria Teresa; Amorim, Bárbara Juarez; Ramos, Celso Darío; Almeida Filho, José Geraldo; de Rezende, Laura Ferreira; Zanatta Sarian, Luís Otávio

    2017-02-01

    To evaluate manual lymphatic drainage (MLD) and active exercise effects on lymphatic alterations of the upper limb (UL), range of motion (ROM) of shoulder, and scar complications after breast cancer surgery. Clinical trial. Health care center. Women (N=105) undergoing radical breast cancer surgery who were matched for staging, age, and body mass index. Women (n=52) were submitted to MLD and 53 to active exercises for UL for 1 month and followed up. Shoulder ROM, surgical wound inspection and palpation, UL circumference measurements, and lymphoscintigraphy were performed in preoperative and postoperative periods. There was no significant difference between groups with regard to wound healing complications, ROM, and UL circumferences. After surgery, 25 (48.1%) of the MLD group and 19 (35.8%) of the active exercise group showed worsening in radiopharmaceutical uptake velocity, whereas 9 (17.3%) of the MLD group and 11 (20.8%) of the active exercise group showed improved velocity (P=.445). With regard to uptake intensity, 27 (51.9%) of the MLD group and 21 (39.6%) of the active exercise group showed worsening whereas 7 (13.5%) of the MLD group and 7 (13.2%) of the active exercise group showed some improvement (P=.391). The presence of collateral circulation was similar in both groups at both time points evaluated. The active exercise group had a significant increase in postoperative liver absorption (P=.005), and the MLD group had a significant increase in postoperative dermal backflow (P=.024). MLD and active exercise effects are equivalent with regard to morbidity. Minor changes in lymphatic function associated with either MLD or active exercises were not related to patients' symptoms or signs. Copyright © 2016 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

  9. Spatial localization of the Ebola virus glycoprotein mucin-like domain determined by cryo-electron tomography.

    PubMed

    Tran, Erin E H; Simmons, James A; Bartesaghi, Alberto; Shoemaker, Charles J; Nelson, Elizabeth; White, Judith M; Subramaniam, Sriram

    2014-09-01

    The Ebola virus glycoprotein mucin-like domain (MLD) is implicated in Ebola virus cell entry and immune evasion. Using cryo-electron tomography of Ebola virus-like particles, we determined a three-dimensional structure for the full-length glycoprotein in a near-native state and compared it to that of a glycoprotein lacking the MLD. Our results, which show that the MLD is located at the apex and the sides of each glycoprotein monomer, provide a structural template for analysis of MLD function. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  10. A geographical and seasonal comparison of nitrogen uptake by phytoplankton in the Southern Ocean

    NASA Astrophysics Data System (ADS)

    Philibert, R.; Waldron, H.; Clark, D.

    2015-03-01

    The impact of light and nutrients (such as silicate and iron) availability on nitrogen uptake and primary production vary seasonally and regionally in the Southern Ocean. The seasonal cycle of nitrogen uptake by phytoplankton in the Southern Ocean is not fully resolved over an annual scale due to the lack of winter in situ measurements. In this study, nitrate and ammonium uptake rates were measured using 15N tracers during a winter cruise in July 2012 and a summer cruise in February-March 2013. The winter cruise consisted of two legs: leg 1 extended from Cape Town to the ice margin along the GoodHope line and leg 2 stretched from the ice margin to Marion Island. The summer cruise was mostly focused on the subantarctic zone of the Atlantic sector. In winter, nitrogen uptake rates were measured at 55 and 1% of the surface photosynthetically active radiation (sPAR). The summer uptake rates were measured at four light depths corresponding to 55, 30, 10 and 3% sPAR. The integrated nitrate uptake rates during the winter cruise ranged from 0.17 to 5.20 mmol N m-2 d-1 (average 1.14 mmol N m-2 d-1) while the ammonium uptake rates ranged from 0.60 to 32.86 mmol N m-2 d-1 (average 6.73 mmol N m-2 d-1). During the summer cruise, the mean-integrated nitrate uptake rate was 0.20 mmol N m-2 d-1 with a range between 0.10 and 0.38 mmol N m-2 d-1. The integrated ammonium uptake rate averaged 4.39 mmol N m-2 d-1 and ranged from 1.12 to 9.05 mmol N m-2 d-1. The factors controlling nitrogen uptake in winter and summer were investigated. During the winter cruise, it was found that the different nitrogen uptake regimes were not separated by the fronts of the Antarctic Circumpolar Current (ACC). Light (in terms of day length) and ammonium concentration had the most influence on the nitrogen uptake. In the summer, increases in the mixed layer depth (MLD) resulted in increased nitrogen uptake rates. This suggests that the increases in the MLD could be alleviating nutrient limitations experienced by the phytoplankton at the end of summer.

  11. [New trends in the evaluation of mathematics learning disabilities. The role of metacognition].

    PubMed

    Miranda-Casas, A; Acosta-Escareño, G; Tarraga-Minguez, R; Fernández, M I; Rosel-Remírez, J

    2005-01-15

    The current trends in the evaluation of mathematics learning disabilities (MLD), based on cognitive and empirical models, are oriented towards combining procedures involving the criteria and the evaluation of cognitive and metacognitive processes, associated to performance in mathematical tasks. The objective of this study is to analyse the metacognitive skills of prediction and evaluation in performing maths tasks and to compare metacognitive performance among pupils with MLD and younger pupils without MLD, who have the same level of mathematical performance. Likewise, we analyse these pupils' desire to learn. Subjects and methods. We compare a total of 44 pupils from the second cycle of primary education (8-10 years old) with and without mathematics learning disabilities. Significant differences are observed between pupils with and without mathematics learning disabilities in their capacity to predict and assess all of the tasks evaluated. As regards their 'desire to learn', no significant differences were found between pupils with and without MLD, which indicated that those with MLD assess their chances of successfully performing maths tasks in the same way as those without MLD. Finally, the findings reveal a similar metacognitive profile in pupils with MLD and the younger pupils with no mathematics learning disabilities. In future studies we consider it important to analyse the influence of the socio-affective belief system in the use of metacognitive skills.

  12. Simulation of global oceanic upper layers forced at the surface by an optimal bulk formulation derived from multi-campaign measurements.

    NASA Astrophysics Data System (ADS)

    Garric, G.; Pirani, A.; Belamari, S.; Caniaux, G.

    2006-12-01

    order to improve the air/sea interface for the future MERCATOR global ocean operational system, we have implemented the new bulk formulation developed by METEO-FRANCE (French Meteo office) in the MERCATOR 2 degree global ocean-ice coupled model (ORCA2/LIM). A single bulk formulation for the drag, temperature and moisture exchange coefficients is derived from an extended consistent database gathering 10 years of measurements issued from five experiments dedicated to air-sea fluxes estimates (SEMAPHORE, CATCH, FETCH, EQUALANT99 and POMME) in various oceanic basins (from Northern to equatorial Atlantic). The available database (ALBATROS) cover the widest range of atmospheric and oceanic conditions, from very light (0.3 m/s) to very strong (up to 29 m/s) wind speeds, and from unstable to extremely stable atmospheric boundary layer stratification. We have defined a work strategy to test this new formulation in a global oceanic context, by using this multi- campaign bulk formulation to derive air-sea fluxes from base meteorological variables produces by the ECMWF (European Centre for Medium Range and Weather Forecast) atmospheric forecast model, in order to get surface boundary conditions for ORCA2/LIM. The simulated oceanic upper layers forced at the surface by the previous air/sea interface are compared to those forced by the optimal bulk formulation. Consecutively with generally weaker transfer coefficient, the latter formulation reduces the cold bias in the equatorial Pacific and increases the too weak summer sea ice extent in Antarctica. Compared to a recent mixed layer depth (MLD) climatology, the optimal bulk formulation reduces also the too deep simulated MLDs. Comparison with in situ temperature and salinity profiles in different areas allowed us to evaluate the impact of changing the air/sea interface in the vertical structure.

  13. Taking Stock of 40 Years of Research on Mathematical Learning Disability: Methodological Issues and Future Directions

    ERIC Educational Resources Information Center

    Lewis, Katherine E.; Fisher, Marie B.

    2016-01-01

    Although approximately 5-8% of students have a mathematical learning disability (MLD), researchers have yet to develop a consensus operational definition. To examine how MLD has been identified and what mathematics topics have been explored, the authors conducted a systematic review of 165 studies on MLD published between 1974 and 2013. To move…

  14. Gallbladder Polyps in Metachromatic Leukodystrophy.

    PubMed

    Almarzooqi, Saeeda; Quadri, Asif; Albawardi, Alia

    2018-04-01

    Metachromatic leukodystrophy (MLD) is an autosomal recessive lysosomal storage disease, caused by a deficiency of arylsulfatase A, and leads to demyelination of the nervous system. A putative association between MLD and gallbladder pathology including malignancy is documented in the medical literature. A 10-year-old boy with MLD was found to have a papillary growth within a cystically dilated gallbladder. The lesion was confirmed to be papillomatosis/polyp with focal intestinal metaplasia. Dysplasia was not identified. MLD may be associated with a spectrum of gallbladder pathology including neoplastic conditions. Pathologists and clinicians should be aware of this association/risk. The patient may be offered regular ultrasound screening of the gallbladder.

  15. Neural network-based estimates of Southern Ocean net community production from in-situ O2 / Ar and satellite observation: a methodological study

    NASA Astrophysics Data System (ADS)

    Chang, C.-H.; Johnson, N. C.; Cassar, N.

    2013-10-01

    Southern Ocean organic carbon export plays an important role in the global carbon cycle, yet its basin-scale climatology and variability are uncertain due to limited coverage of in situ observations. In this study, a neural network approach based on the self-organizing map (SOM) is adopted to construct weekly gridded (1° × 1°) maps of organic carbon export for the Southern Ocean from 1998 to 2009. The SOM is trained with in situ measurements of O2 / Ar-derived net community production (NCP) that are tightly linked to the carbon export in the mixed layer on timescales of 1-2 weeks, and six potential NCP predictors: photosynthetically available radiation (PAR), particulate organic carbon (POC), chlorophyll (Chl), sea surface temperature (SST), sea surface height (SSH), and mixed layer depth (MLD). This non-parametric approach is based entirely on the observed statistical relationships between NCP and the predictors, and therefore is strongly constrained by observations. A thorough cross-validation yields three retained NCP predictors, Chl, PAR, and MLD. Our constructed NCP is further validated by good agreement with previously published independent in situ derived NCP of weekly or longer temporal resolution through real-time and climatological comparisons at various sampling sites. The resulting November-March NCP climatology reveals a pronounced zonal band of high NCP roughly following the subtropical front in the Atlantic, Indian and western Pacific sectors, and turns southeastward shortly after the dateline. Other regions of elevated NCP include the upwelling zones off Chile and Namibia, Patagonian Shelf, Antarctic coast, and areas surrounding the Islands of Kerguelen, South Georgia, and Crozet. This basin-scale NCP climatology closely resembles that of the satellite POC field and observed air-sea CO2 flux. The long-term mean area-integrated NCP south of 50° S from our dataset, 14 mmol C m-2 d-1, falls within the range of 8.3-24 mmol C m-2 d-1 from other model estimates. A broad agreement is found in the basin-wide NCP climatology among various models but with significant spatial variations, particularly in the Patagonian Shelf. Our approach provides a comprehensive view of the Southern Ocean NCP climatology and a potential opportunity to further investigate interannual and intraseasonal variability.

  16. Neural network-based estimates of Southern Ocean net community production from in situ O2 / Ar and satellite observation: a methodological study

    NASA Astrophysics Data System (ADS)

    Chang, C.-H.; Johnson, N. C.; Cassar, N.

    2014-06-01

    Southern Ocean organic carbon export plays an important role in the global carbon cycle, yet its basin-scale climatology and variability are uncertain due to limited coverage of in situ observations. In this study, a neural network approach based on the self-organizing map (SOM) is adopted to construct weekly gridded (1° × 1°) maps of organic carbon export for the Southern Ocean from 1998 to 2009. The SOM is trained with in situ measurements of O2 / Ar-derived net community production (NCP) that are tightly linked to the carbon export in the mixed layer on timescales of one to two weeks and with six potential NCP predictors: photosynthetically available radiation (PAR), particulate organic carbon (POC), chlorophyll (Chl), sea surface temperature (SST), sea surface height (SSH), and mixed layer depth (MLD). This nonparametric approach is based entirely on the observed statistical relationships between NCP and the predictors and, therefore, is strongly constrained by observations. A thorough cross-validation yields three retained NCP predictors, Chl, PAR, and MLD. Our constructed NCP is further validated by good agreement with previously published, independent in situ derived NCP of weekly or longer temporal resolution through real-time and climatological comparisons at various sampling sites. The resulting November-March NCP climatology reveals a pronounced zonal band of high NCP roughly following the Subtropical Front in the Atlantic, Indian, and western Pacific sectors, and turns southeastward shortly after the dateline. Other regions of elevated NCP include the upwelling zones off Chile and Namibia, the Patagonian Shelf, the Antarctic coast, and areas surrounding the Islands of Kerguelen, South Georgia, and Crozet. This basin-scale NCP climatology closely resembles that of the satellite POC field and observed air-sea CO2 flux. The long-term mean area-integrated NCP south of 50° S from our dataset, 17.9 mmol C m-2 d-1, falls within the range of 8.3 to 24 mmol C m-2 d-1 from other model estimates. A broad agreement is found in the basin-wide NCP climatology among various models but with significant spatial variations, particularly in the Patagonian Shelf. Our approach provides a comprehensive view of the Southern Ocean NCP climatology and a potential opportunity to further investigate interannual and intraseasonal variability.

  17. Combining Manual Lymph Drainage with Physical Exercise after Modified Radical Mastectomy Effectively Prevents Upper Limb Lymphedema.

    PubMed

    Zhang, Lijuan; Fan, Aiqun; Yan, Jun; He, Yan; Zhang, Huiting; Zhang, Huizhen; Zhong, Qiaoling; Liu, Feng; Luo, Qinghua; Zhang, Liping; Tang, Hailin; Xin, Mingzhu

    2016-06-01

    Upper limb lymphedema is a common complication after radical mastectomy in patients with breast cancer. In this study, we examined the efficacy of self-manual lymph drainage (MLD) after modified radical mastectomy for the prevention of upper limb lymphedema, scar formation, or shoulder joint dysfunction in breast cancer patients. Breast cancer patients scheduled for modified radical mastectomy were randomly apportioned to undergo physical exercise only (PE group, the control; n = 500) or self-MLD as well as exercise (MLD group; n = 500) after surgery. In the PE group, patients started to undertake remedial exercises and progressive weight training after recovery from anesthesia. In the MLD group, in addition to receiving the same treatments as in the PE group, the patients were trained to perform self-MLD on the surgical incision for 10 min/session, 3 sessions/day, beginning after suture removal and incision closure (10 to 30 days after the surgery). Scar formation was evaluated at one week, and 1, 3, 6, and 12 months after the surgery, respectively. Upper limb circumference and shoulder abduction were measured 24 h before surgery, and at one week, and 1, 3, 6 and 12 months after the surgery. Compared to those in the PE group, patients in MLD group experienced significant improvements in scar contracture, shoulder abduction, and upper limb circumference. Self-MLD, in combination with physical exercise, is beneficial for breast cancer patients in preventing postmastectomy scar formation, upper limb lymphedema, and shoulder joint dysfunction.

  18. Randomized trial investigating the efficacy of manual lymphatic drainage to improve early outcome after total knee arthroplasty.

    PubMed

    Ebert, Jay R; Joss, Brendan; Jardine, Berit; Wood, David J

    2013-11-01

    To investigate the efficacy of manual lymphatic drainage (MLD) in the early postoperative period after total knee arthroplasty (TKA) to reduce edema and pain and improve knee range of motion. Prospective randomized controlled trial. Private hospital and functional rehabilitation clinic. Consecutive sample of patients (N=43; 53 knees) scheduled for TKA. MLD (vs no MLD) on days 2, 3, and 4 postoperatively. Both groups underwent conventional, concomitant physical therapy. Clinical assessment was undertaken pre- and postoperatively prior to and after the designated postoperative MLD sessions (days 2, 3, and 4) and at 6 weeks postsurgery. This included active knee flexion and extension range of motion, lower limb girths (ankle, midpatella, thigh, and calf), and knee pain using a numeric rating scale and the Knee Injury and Osteoarthritis Outcome Score. A significant group effect was observed for active knee flexion, with post hoc tests demonstrating a significantly greater active knee flexion in the MLD group when compared with the control (no MLD) group at the final measure prior to hospital discharge (day 4 postsurgery) and at 6 weeks postsurgery. There were no further group effects observed for the remaining patient-reported and functional outcomes. MLD in the early postoperative stages after TKA appears to improve active knee flexion up to 6 weeks postsurgery, in addition to conventional care. Copyright © 2013 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

  19. Extended GTST-MLD for aerospace system safety analysis.

    PubMed

    Guo, Chiming; Gong, Shiyu; Tan, Lin; Guo, Bo

    2012-06-01

    The hazards caused by complex interactions in the aerospace system have become a problem that urgently needs to be settled. This article introduces a method for aerospace system hazard interaction identification based on extended GTST-MLD (goal tree-success tree-master logic diagram) during the design stage. GTST-MLD is a functional modeling framework with a simple architecture. Ontology is used to extend the ability of system interaction description in GTST-MLD by adding the system design knowledge and the past accident experience. From the level of functionality and equipment, respectively, this approach can help the technician detect potential hazard interactions. Finally, a case is used to show the method. © 2011 Society for Risk Analysis.

  20. Parts and 'holes': gaps in rational number sense among children with vs. without mathematical learning disabilities.

    PubMed

    Mazzocco, Michèle M M; Devlin, Kathleen T

    2008-09-01

    Many middle-school students struggle with decimals and fractions, even if they do not have a mathematical learning disability (MLD). In the present longitudinal study, we examined whether children with MLD have weaker rational number knowledge than children whose difficulty with rational numbers occurs in the absence of MLD. We found that children with MLD failed to accurately name decimals, to correctly rank order decimals and/or fractions, and to identify equivalent ratios (e.g. 0.5 = 1/2); they also 'identified' incorrect equivalents (e.g. 0.05 = 0.50). Children with low math achievement but no MLD accurately named decimals and identified equivalent pairs, but failed to correctly rank order decimals and fractions. Thus failure to accurately name decimals was an indicator of MLD; but accurate naming was no guarantee of rational number knowledge - most children who failed to correctly rank order fractions and decimals tests passed the naming task. Most children who failed the ranking tests at 6th grade also failed at 8th grade. Our findings suggest that a simple task involving naming and rank ordering fractions and decimals may be a useful addition to in-class assessments used to determine children's learning of rational numbers.

  1. Are WISC IQ scores in children with mathematical learning disabilities underestimated? The influence of a specialized intervention on test performance.

    PubMed

    Lambert, Katharina; Spinath, Birgit

    2018-01-01

    Intelligence measures play a pivotal role in the diagnosis of mathematical learning disabilities (MLD). Probably as a result of math-related material in IQ tests, children with MLD often display reduced IQ scores. However, it remains unclear whether the effects of math remediation extend to IQ scores. The present study investigated the impact of a special remediation program compared to a control group receiving private tutoring (PT) on the WISC IQ scores of children with MLD. We included N=45 MLD children (7-12 years) in a study with a pre- and post-test control group design. Children received remediation for two years on average. The analyses revealed significantly greater improvements in the experimental group on the Full-Scale IQ, and the Verbal Comprehension, Perceptual Reasoning, and Working Memory indices, but not Processing Speed, compared to the PT group. Children in the experimental group showed an average WISC IQ gain of more than ten points. Results indicate that the WISC IQ scores of MLD children might be underestimated and that an effective math intervention can improve WISC IQ test performance. Taking limitations into account, we discuss the use of IQ measures more generally for defining MLD in research and practice. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. Effects of lymphatic drainage and local cryo exposition regeneration after high-intensive exercises

    PubMed Central

    Behringer, Michael; Jedlicka, Diana; McCourt, Molly; Ring, Matthias; Mester, Joachim

    2016-01-01

    Summary Background Recovery from exercise and competition is important in sports medicine, particularly when rest periods are short. The objective is to determine the efficacy of cryo exposition (CRY) and manual lymphatic drainage (MLD) to hasten short term recovery of muscle performance after eccentric contractions. Methods In a randomized controlled trial, 30 healthy sport students (21 males, 9 females; age: 25.7±2.8 years) performed 4×20 eccentric contractions of knee extensors, followed by 30 min MLD, CRY, or rest (RST) under controlled laboratory environment. Maximal voluntary contractions (MVC), electrically induced muscle fatigue (FI), and electrically induced tetani (EIT) at low (T2: 20 Hz) and high frequencies were tested. Results Force decline and recovery kinetics regarding MVC, FI, and EIT did not differ significantly (p<0.05) between groups. That is, 24 h after the intervention, MVC (MLD: 80.9±5.5%; CRY: 81.1±8.5%; RST: 83.5±7.3%), FI (MLD: 83.2±23.7%; CRY: 81.2±38.8%; RST: 93.2±22.9%), and EIT (T1: MLD: 53.0±29.5%; CRY: 39.0±32.9%; RST: 46.3±26.1%; T2: MLD: 84.2±27.2%; CRY: 64.2±24.2%; RST: 66.6±22.3%) were similarly depressed irrespective of applied treatments. Conclusion Neither CRY nor MLD hastened the recovery of muscle performance, when applied for 30 min. Identification number of the Primary Registry Network: DRKS00007608. PMID:27900297

  3. Venous flow during manual lymphatic drainage applied to different regions of the lower extremity in people with and without chronic venous insufficiency: a cross-sectional study.

    PubMed

    Crisóstomo, R S S; Candeias, M S; Armada-da-Silva, P A S

    2017-03-01

    To evaluate the effect of manual lymphatic drainage (MLD) on venous flow when applied to the medial and lateral aspects of the thigh and leg in patients with chronic venous insufficiency (CVI) and healthy subjects. Cross-sectional study. Participants were assessed in a school-based health community attendant service. Fifty-seven subjects participated in this study {mean age: 43 [standard deviation (SD) 14] years, 38 women and 19 men}. Of these, 28 subjects had CVI [mean age 47 (SD 12) years] and 29 subjects did not have CVI [mean age 39 (14) years]. MLD was applied by a certificated physical therapist to the medial and lateral aspects of the thigh and leg. Cross-sectional area; blood flow velocities in the femoral vein, great saphenous vein, popliteal vein and small saphenous vein at baseline and during MLD, measured by duplex ultrasound. Flow volume in the femoral vein increased from baseline [5.19 (SD 3.25)cm 3 /second] when MLD was applied to the medial [7.03 (SD 3.65)cm 3 /second; P≤0.001; mean difference -1.69; 95% confidence interval (CI) -2.42 to -0.97] and lateral [6.16 (SD 3.35)cm 3 /second; P≤0.001; mean difference -1.04; 95% CI -1.70 to -0.39] aspects of the thigh. Venous flow augmentation in the femoral vein and great saphenous vein was higher when MLD was applied to the medial aspect of the thigh (P<0.001), while MLD had a similar effect on venous blood flow regardless of whether it was applied to the medial or the lateral aspect of the leg (P=0.731). MLD increases blood flow in deep and superficial veins. MLD should be applied along the route of the venous vessels for improved venous return. Copyright © 2016 Chartered Society of Physiotherapy. Published by Elsevier Ltd. All rights reserved.

  4. [Low dose volume histogram analysis of the lungs in prediction of acute radiation pneumonitis in patients with esophageal cancer treated with three-dimensional conformal radiotherapy].

    PubMed

    Shen, Wen-bin; Zhu, Shu-chai; Gao, Hong-mei; Li, You-mei; Liu, Zhi-kun; Li, Juan; Su, Jing-wei; Wan, Jun

    2013-01-01

    To investigate the predictive value of low dose volume of the lung on acute radiation pneumonitis (RP) in patients with esophageal cancer treated with three-dimensional conformal radiotherapy (3D-CRT) only, and to analyze the relation of comprehensive parameters of the dose-volume V5, V20 and mean lung dose (MLD) with acute RP. Two hundred and twenty-two patients with esophageal cancer treated by 3D-CRT have been followed up. The V5-V30 and MLD were calculated from the dose-volume histogram system. The clinical factors and treatment parameters were collected and analyzed. The acute RP was evaluated according to the RTOG toxicity criteria. The acute RP of grade 1, 2, 3 and 4 were observed in 68 (30.6%), 40 (18.0%), 8 (3.6%) and 1 (0.5%) cases, respectively. The univariate analysis of measurement data:The primary tumor length, radiation fields, MLD and lung V5-V30 had a significant relationship with the acute RP. The magnitude of the number of radiation fields, the volume of GTV, MLD and Lung V5-V30 had a significant difference in whether the ≥ grade 1 and ≥ grade 2 acute RP developed or not. Binary logistic regression analysis showed that MLD, Lung V5, V20 and V25 were independent risk factors of ≥ grade 1 acute RP, and the radiation fields, MLD and Lung V5 were independent risk factors of ≥ grade 2 acute RP. The ≥ grade 1 and ≥ grade 2 acute RP were significantly decreased when MLD less than 14 Gy, V5 and V20 were less than 60% and 28%,respectively. When the V20 ≤ 28%, the acute RP was significantly decreased in V5 ≤ 60% group. When the MLD was ≤ 14 Gy, the ≥ 1 grade acute RP was significantly decreased in the V5 ≤ 60% group. When the MLD was >14 Gy, the ≥ grade 2 acute RP was significantly decreased in the V5 ≤ 60% group. The low dose volume of the lung is effective in predicting radiation pneumonitis in patients with esophageal cancer treated with 3D-CRT only. The comprehensive parameters combined with V5, V20 and MLD may increase the effect in predicting radiation pneumonitis.

  5. Seasonal and interannual variation of physical and biological processes during 1994-2001 in the Sea of Japan/East Sea: A three-dimensional physical-biogeochemical modeling study

    NASA Astrophysics Data System (ADS)

    Liu, Guimei; Chai, Fei

    2009-09-01

    A Pacific basin-wide physical-biogeochemical model has been used to investigate the seasonal and interannual variation of physical and biological fields with analyses focusing on the Sea of Japan/East Sea (JES). The physical model is based on the Regional Ocean Model System (ROMS), and the biogeochemical model is based on the Carb on, Si(OH) 4, Nitrogen Ecosystem (CoSiNE) model. The coupled ROMS-CoSiNE model is forced with the daily air-sea fluxes derived from the National Centers for Environmental Prediction (NCEP) and the National Center for Atmospheric Research (NCAR) reanalysis for the period of 1994 to 2001, and the model results are used to evaluate climate impact on nutrient transport in Mixed Layer Depth (MLD) and phytoplankton spring bloom dynamics in the JES. The model reproduces several key features of sea surface temperature (SST) and surface currents, which are consistent with the previous modeling and observational results in the JES. The calculated volume transports through the three major straits show that the Korea Strait (KS) dominates the inflow to the JES with 2.46 Sv annually, and the Tsugaru Strait (TS) and the Soya Strait (SS) are major outflows with 1.85 Sv and 0.64 Sv, respectively. Domain-averaged phytoplankton biomass in the JES reaches its spring peak 1.8 mmol N m - 3 in May and shows a relatively weak autumn increase in November. Strong summer stratification and intense consumption of nitrate by phytoplankton during the spring result in very low nitrate concentration at the upper layer, which limits phytoplankton growth in the JES during the summer. On the other hand, the higher grazer abundance likely contributes to the strong suppression of phytoplankton biomass after the spring bloom in the JES. The model results show strong interannual variability of SST, nutrients, and phytoplankton biomass with sudden changes in 1998, which correspond to large-scale changes of the Pacific Decadal Oscillation (PDO). Regional comparisons of interannual variations in springtime were made for the southern and northern JES. Variations of nutrients and phytoplankton biomass related to the PDO warm/cold phase changes were detected in both the southern and northern JES, and there were regional differences with respect to the mechanisms and timing. During the warm PDO, the nutrients integrated in the MLD increased in the south and decreased in the north in winter. Conversely, during the cold PDO, the nutrients integrated in the MLD decreased in the south and increased in the north. Wind divergence/convergence likely drives the differences in the southern and northern regions when northerly and northwesterly monsoon dominates in winter in the JES. Subjected to the nutrient change, the growth of phytoplankton biomass appears to be limited neither by nutrient nor by light consistently both in the southern and northern regions. Namely, the JES is at the transition zone of the lower trophic-level ecosystem between light-limited and nutrient-limited zones.

  6. Impaired acuity of the approximate number system underlies mathematical learning disability (dyscalculia)

    PubMed Central

    Mazzocco, Michèle M. M.; Feigenson, Lisa; Halberda, Justin

    2015-01-01

    Many children have significant mathematical learning disabilities (MLD, or dyscalculia) despite adequate schooling. We hypothesize that MLD partly results from a deficiency in the Approximate Number System (ANS) that supports nonverbal numerical representations across species and throughout development. Here we show that ninth grade students with MLD have significantly poorer ANS precision than students in all other mathematics achievement groups (low-, typically-, and high-achieving), as measured by psychophysical assessments of ANS acuity (w) and of the mappings between ANS representations and number words (cv). This relationship persists even when controlling for domain-general abilities. Furthermore, this ANS precision does not differentiate low- from typically-achieving students, suggesting an ANS deficit that is specific to MLD. PMID:21679173

  7. Azimuthal anisotropy layering and plate motion in the Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Yuan, H.; Romanowicz, B. A.

    2012-12-01

    We recently developed a three dimensional radially and azimuthally anisotropic model of the upper mantle in north America, using a combination of long-period 3-component surface and overtone waveforms, and SKS splitting measurements (Yuan and Romanowicz, 2010, Yuan et al., 2011). We showed that azimuthal anisotropy is a powerful tool to detect layering in the upper mantle, revealing two domains in the cratonic lithosphere, separated by a sharp laterally varying boundary in the depth range 100-150 km, which seems to coincide with the mid-lithospheric boundary (MLD) found in receiver function studies. Contrary to receiver functions, azimuthal anisotropy also detects the lithosphere-asthenosphere boundary (LAB) as manifested by a change in the fast axis direction, which becomes quasi-parallel to the absolute plate motion below ~250 km depth. A zone of stronger azimuthal anisotropy is found below the LAB both in the western US (peaking at depths of 100-150km) and in the craton (peaking at a depth of about 300 km). Here we show preliminary attempts at expanding our approach to the global scale, with a specific goal of determining whether such an anisotropic LAB can also be observed in the Pacific ocean. We started with our most recent global upper mantle radially anisotropic shear velocity model, determined using the Spectral Element Method (SEMum2; French et al., this meeting). We augment the corresponding global surface wave and overtone dataset (period range 60 to 400 s) with deep events and shorter period body waves, in order to ensure optimal deeper depth (>250km) anisotropy recovery due to the paucity of shear wave splitting measurements in the oceans. Our preliminary results, which do not yet incorporate SKS splitting measurements, look promising as they confirm the layering found previously in North America, using a different, global dataset and starting model. In the Pacific, our study confirms earlier azimuthal anisotropy results in the region (e.g. Smith et al. 2004; Maggi et al. 2006) that the shallow upper mantle beneath the ocean basin is strongly stratified. Our results further illustrate that 1) a shallow anisotropy domain (~100 km) is present, which is high in velocity and has in general a northward anisotropy direction where the plate is old (>80 Ma); and 2) there is a deeper domain (100-200 km) with stronger anisotropy, which correlates spatially with the low velocity zone and has a fast axis direction in good agreement with the absolute plate motion direction (HS3 NUVEL-1A). The boundary between the anisotropy domains clearly follows the age progressive deepening of the fast velocity in the shallow domain, suggesting an oceanic LAB that separates the Pacific lithosphere and the underlying asthenosphere.

  8. Modified lingguizhugan decoction incorporated with dietary restriction and exercise ameliorates hyperglycemia, hyperlipidemia and hypertension in a rat model of the metabolic syndrome.

    PubMed

    Yao, Limei; Wei, Jingjing; Shi, Si; Guo, Kunbin; Wang, Xiangyu; Wang, Qi; Chen, Dingsheng; Li, Weirong

    2017-02-28

    Modified Lingguizhugan Decoction (MLD) came from famous Chinese medicine Linggui Zhugan Decoction. The MLD is used for the treatment of metabolic syndrome in the clinical setting. Our study focuses on the comprehensive treatment of MLD incorporated with dietary restriction and exercise in a rat model of the metabolic syndrome (MS). Rats were divided into five groups: control group (Cont), high-fat diet group (HFD), high-fat diet incorporated with dietary restriction group (HFD-DR), exercise incorporated with dietary restriction group (HFD-DR-Ex) and MLD incorporated with dietary restriction and exercise group (HFD-DR-Ex-MLD). Treatments were conducted for 1 week after feeding high-fat diet for 12 weeks. The effects of treatments on high fat diet-induced obesity, hyperglycemia, hyperlipidemia, hypertension, hepatic injury and insulin resistance in rats of MS were examined. In addition, the tumor necrosis factor-α (TNF-α), leptin and protein kinase B (PKB) in rats serum and liver were also examined by enzyme-linked immunosorbent assay (ELISA). After a week's intervention by dietary restriction, dietary restriction incorporated with exercise or MLD, compared with HFD rats, the relative weight of liver and fat, levels of triglyceride, total cholesterol, low-density lipoprotein, free fatty acid, aspartate aminotransferase, glutamic-pyruvic transaminase and alkaline phosphatase, insulin, were significantly decreased (p < 0.05 or 0.01). This treatment also inhibited abnormal increases of TNF-α, leptin and PKB in serum and liver. MLD incorporated with dietary restriction and exercise treatment exhibit effects in alleviating high-fat diet-induced obesity, hyperglycemia, hyperlipidemia, hypertension, hepatic injury and insulin resistance, which are possibly due to the down-regulation of TNF-α, leptin and PKB.

  9. Effect of Manual Lymphatic Drainage After Total Knee Arthroplasty: A Randomized Controlled Trial.

    PubMed

    Pichonnaz, Claude; Bassin, Jean-Philippe; Lécureux, Estelle; Christe, Guillaume; Currat, Damien; Aminian, Kamiar; Jolles, Brigitte M

    2016-05-01

    To evaluate the effects of manual lymphatic drainage (MLD) on knee swelling and the assumed consequences of swelling after total knee arthroplasty (TKA). Randomized controlled trial. Primary care hospital. Two groups of 30 patients were randomized before TKA surgery (N=60; 65% women [39]; mean age, 70.7±8.8y; weight, 77.8±11.3kg; size, 1.64±0.08m; body mass index, 29.9±4.1kg/m(2)). Participants received either 5 MLD treatments or a placebo, added to rehabilitation, in between the second day and the seventh day after surgery. Swelling was measured by blinded evaluators before surgery and at second day, seventh day, and 3 months using bioimpedance spectroscopy and volume measurement. Secondary outcomes were active and passive range of motion, pain, knee function, and gait parameters. At seventh day and 3 months, no outcome was significantly different between groups, except for the knee passive flexion contracture at 3 months, which was lower and less frequent in the MLD group (-2.6°; 95% confidence interval, -5.0° to -0.21°; P=.04; absolute risk reduction, 26.6%; 95% confidence interval, 0.9%-52.3%; number needed to treat, 4). The mean pain level decreased between 5.8 and 8.2mm on the visual analog scale immediately after MLD, which was significant after 4 of 5 MLD treatments. MLD treatments applied immediately after TKA surgery did not reduce swelling. It reduced pain immediately after the treatment. Further studies should investigate whether the positive effect of MLD on knee extension is replicable. Copyright © 2016 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

  10. The results of skin prick testing in patients with allergic rhinitis: a comparison between a multiple lancet device and a single lancet.

    PubMed

    Ateş, Aşkin; Kinikli, Gülay; Turgay, Murat; Aydoğan, Nergis; Duman, Murat

    2004-01-01

    Skin prick testing (SPT) is widely used in the assessment of allergic disorders. Different SPT techniques are widely used. The aim of this study was to compare the response to SPT using a multiple lancet device (MLD) with the results of a single lancet (SL). Fifty patients with allergic rhinitis were included in this study. Initially, SPT was performed by a SL technique. After one week SPT was repeated using the MLD on all patients. The patients were tested with a panel containing 19 specific allergens including grass pollen, tree pollen, house dust mites, weed pollen allergen extracts, histamine and a negative control. The skin responses were recorded after 15 minutes for each device by measuring the diameter of the wheal and the erythema. The skin wheal responses for grass pollen, tree pollen, weed pollen and house dust mite allergen extracts obtained using the SL were generally significantly larger than those using the MLD. The comparison between the MLD and the SL methods revealed that SPT was positive with SL and negative with MLD in 176 tests (15.3%), and on the contrary SPT was positive with MLD and negative with SL in only 13 tests (1%). In conclusion, we claim that SPT using SL shows a higher degree of sensitivity and reproducibility.

  11. Mathematical learning disabilities and attention deficit and/or hyperactivity disorder: A study of the cognitive processes involved in arithmetic problem solving.

    PubMed

    Iglesias-Sarmiento, Valentín; Deaño, Manuel; Alfonso, Sonia; Conde, Ángeles

    2017-02-01

    The purpose of this study was to examine the contribution of cognitive functioning to arithmetic problem solving and to explore the cognitive profiles of children with attention deficit and/or hyperactivity disorder (ADHD) and with mathematical learning disabilities (MLD). The sample was made up of a total of 90 students of 4th, 5th, and 6th grade organized in three: ADHD (n=30), MLD (n=30) and typically achieving control (TA; n=30) group. Assessment was conducted in two sessions in which the PASS processes and arithmetic problem solving were evaluated. The ADHD group's performance in planning and attention was worse than that of the control group. Children with MLD obtained poorer results than the control group in planning and simultaneous and successive processing. Executive processes predicted arithmetic problem solving in the ADHD group whereas simultaneous processing was the unique predictor in the MLD sample. Children with ADHD and with MLD showed characteristic cognitive profiles. Groups' problem-solving performance can be predicted from their cognitive functioning. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Subtypes and comorbidity in mathematical learning disabilities: Multidimensional study of verbal and visual memory processes is key to understanding.

    PubMed

    Szűcs, D

    2016-01-01

    A large body of research suggests that mathematical learning disability (MLD) is related to working memory impairment. Here, I organize part of this literature through a meta-analysis of 36 studies with 665 MLD and 1049 control participants. I demonstrate that one subtype of MLD is associated with reading problems and weak verbal short-term and working memory. Another subtype of MLD does not have associated reading problems and is linked to weak visuospatial short-term and working memory. In order to better understand MLD we need to precisely define potentially modality-specific memory subprocesses and supporting executive functions, relevant for mathematical learning. This can be achieved by taking a multidimensional parametric approach systematically probing an extended network of cognitive functions. Rather than creating arbitrary subgroups and/or focus on a single factor, highly powered studies need to position individuals in a multidimensional parametric space. This will allow us to understand the multidimensional structure of cognitive functions and their relationship to mathematical performance. © 2016 Elsevier B.V. All rights reserved.

  13. Mathematics learning disability in girls with Turner syndrome or fragile X syndrome.

    PubMed

    Murphy, Melissa M; Mazzocco, Michèle M M; Gerner, Gwendolyn; Henry, Anne E

    2006-07-01

    Two studies were carried out to examine the persistence (Study 1) and characteristics (Study 2) of mathematics learning disability (MLD) in girls with Turner syndrome or fragile X during the primary school years (ages 5-9 years). In Study 1, the rate of MLD for each syndrome group exceeded the rate observed in a grade-matched comparison group, although the likelihood of MLD persisting through the primary school years was comparable for all three groups. In Study 2, formal and informal math skills were compared across the syndrome groups, a normative group, and children from the normative group who had MLD. Few differences were observed between the Turner syndrome and normative groups. Despite having rote counting and number representation skills comparable to those in the normative group, girls with fragile X had difficulty with counting rules (e.g., cardinality, number constancy). However, this difficulty did not distingush them from the MLD group. Overall, counting skills appear to distinguish the Turner syndrome and fragile X groups, suggesting that the specificity of math deficits emerges earlier for fragile X than Turner syndrome.

  14. Calculation of Cumulative Distributions and Detection Probabilities in Communications and Optics.

    DTIC Science & Technology

    1984-10-01

    the CMLD . As an example of a particular result, Figure 8.1 shows the additional SNR required (often called the CFAR loss) for the MLD, CMLD , and OSD in...the background noise level is known. Notice that although the CFAR loss increases with INR for the MLD, the CMLD and OSD have a bounded loss as the INR...Radar Detectors (J. A. Ritcey) Mean-level detectors (MLD) are commonly used in radar to maintain a constant -*! false-alarm rate ( CFAR ) when the

  15. Mathematical (Dis)abilities Within the Opportunity-Propensity Model: The Choice of Math Test Matters

    PubMed Central

    Baten, Elke; Desoete, Annemie

    2018-01-01

    This study examined individual differences in mathematics learning by combining antecedent (A), opportunity (O), and propensity (P) indicators within the Opportunity-Propensity Model. Although there is already some evidence for this model based on secondary datasets, there currently is no primary data available that simultaneously takes into account A, O, and P factors in children with and without Mathematical Learning Disabilities (MLD). Therefore, the mathematical abilities of 114 school-aged children (grade 3 till 6) with and without MLD were analyzed and combined with information retrieved from standardized tests and questionnaires. Results indicated significant differences in personality, motivation, temperament, subjective well-being, self-esteem, self-perceived competence, and parental aspirations when comparing children with and without MLD. In addition, A, O, and P factors were found to underlie mathematical abilities and disabilities. For the A factors, parental aspirations explained about half of the variance in fact retrieval speed in children without MLD, and SES was especially involved in the prediction of procedural accuracy in general. Teachers’ experience contributed as O factor and explained about 6% of the variance in mathematical abilities. P indicators explained between 52 and 69% of the variance, with especially intelligence as overall significant predictor. Indirect effects pointed towards the interrelatedness of the predictors and the value of including A, O, and P indicators in a comprehensive model. The role parental aspirations played in fact retrieval speed was partially mediated through the self-perceived competence of the children, whereas the effect of SES on procedural accuracy was partially mediated through intelligence in children of both groups and through working memory capacity in children with MLD. Moreover, in line with the componential structure of mathematics, our findings were dependent on the math task used. Different A, O, and P indicators seemed to be important for fact retrieval speed compared to procedural accuracy. Also, mathematical development type (MLD or typical development) mattered since some A, O, and P factors were predictive for MLD only and the other way around. Practical implications of these findings and recommendations for future research on MLD and on individual differences in mathematical abilities are provided. PMID:29867645

  16. Mathematical (Dis)abilities Within the Opportunity-Propensity Model: The Choice of Math Test Matters.

    PubMed

    Baten, Elke; Desoete, Annemie

    2018-01-01

    This study examined individual differences in mathematics learning by combining antecedent (A), opportunity (O), and propensity (P) indicators within the Opportunity-Propensity Model. Although there is already some evidence for this model based on secondary datasets, there currently is no primary data available that simultaneously takes into account A, O, and P factors in children with and without Mathematical Learning Disabilities (MLD). Therefore, the mathematical abilities of 114 school-aged children (grade 3 till 6) with and without MLD were analyzed and combined with information retrieved from standardized tests and questionnaires. Results indicated significant differences in personality, motivation, temperament, subjective well-being, self-esteem, self-perceived competence, and parental aspirations when comparing children with and without MLD. In addition, A, O, and P factors were found to underlie mathematical abilities and disabilities. For the A factors, parental aspirations explained about half of the variance in fact retrieval speed in children without MLD, and SES was especially involved in the prediction of procedural accuracy in general. Teachers' experience contributed as O factor and explained about 6% of the variance in mathematical abilities. P indicators explained between 52 and 69% of the variance, with especially intelligence as overall significant predictor. Indirect effects pointed towards the interrelatedness of the predictors and the value of including A, O, and P indicators in a comprehensive model. The role parental aspirations played in fact retrieval speed was partially mediated through the self-perceived competence of the children, whereas the effect of SES on procedural accuracy was partially mediated through intelligence in children of both groups and through working memory capacity in children with MLD. Moreover, in line with the componential structure of mathematics, our findings were dependent on the math task used. Different A, O, and P indicators seemed to be important for fact retrieval speed compared to procedural accuracy. Also, mathematical development type (MLD or typical development) mattered since some A, O, and P factors were predictive for MLD only and the other way around. Practical implications of these findings and recommendations for future research on MLD and on individual differences in mathematical abilities are provided.

  17. Thin film encapsulation for flexible AM-OLED: a review

    NASA Astrophysics Data System (ADS)

    Park, Jin-Seong; Chae, Heeyeop; Chung, Ho Kyoon; In Lee, Sang

    2011-03-01

    Flexible organic light emitting diode (OLED) will be the ultimate display technology to customers and industries in the near future but the challenges are still being unveiled one by one. Thin-film encapsulation (TFE) technology is the most demanding requirement to prevent water and oxygen permeation into flexible OLED devices. As a polymer substrate does not offer the same barrier performance as glass, the TFE should be developed on both the bottom and top side of the device layers for sufficient lifetimes. This work provides a review of promising thin-film barrier technologies as well as the basic gas diffusion background. Topics include the significance of the device structure, permeation rate measurement, proposed permeation mechanism, and thin-film deposition technologies (Vitex system and atomic layer deposition (ALD)/molecular layer deposition (MLD)) for effective barrier films.

  18. Impaired acuity of the approximate number system underlies mathematical learning disability (dyscalculia).

    PubMed

    Mazzocco, Michèle M M; Feigenson, Lisa; Halberda, Justin

    2011-01-01

    Many children have significant mathematical learning disabilities (MLD, or dyscalculia) despite adequate schooling. The current study hypothesizes that MLD partly results from a deficiency in the Approximate Number System (ANS) that supports nonverbal numerical representations across species and throughout development. In this study of 71 ninth graders, it is shown that students with MLD have significantly poorer ANS precision than students in all other mathematics achievement groups (low, typically, and high achieving), as measured by psychophysical assessments of ANS acuity (w) and of the mappings between ANS representations and number words (cv). This relation persists even when controlling for domain-general abilities. Furthermore, this ANS precision does not differentiate low-achieving from typically achieving students, suggesting an ANS deficit that is specific to MLD. © 2011 The Authors. Child Development © 2011 Society for Research in Child Development, Inc.

  19. Manual lymph drainage efficiently reduces postoperative facial swelling and discomfort after removal of impacted third molars.

    PubMed

    Szolnoky, G; Szendi-Horváth, K; Seres, L; Boda, K; Kemény, L

    2007-09-01

    The removal of wisdom teeth is often associated with severe postoperative edema and pain, and operation on the third molar can cause local inflammation that impairs lymph transport. The objective of the study was to assess the efficacy of manual lymph drainage (MLD) in reducing swelling following bilateral wisdom tooth removal. Ten consecutive patients with bilateral impacted wisdom teeth that required surgical removal were enrolled in the study. Each patient was postoperatively treated with MLD (after Vodder's method) on one side of the neck region with the untreated contralateral side as a control. Swelling was evaluated using a tape-measure placed in contact with the skin. The six landmarks of measurement included tragus-lip junction, tragus-pogonion, mandibular angle-external corner of eye, mandibular angle-ala nasi, mandibular angle-lip junction, and mandibular angle-median point of chin. Subjective assessment of MLD was conducted with self-evaluation using a visual analogue bar scale (VAS, range 0-100 mm). Of the 6 linear measurements, 4 lines (2, 4, 5, 6) showed a significant reduction of swelling on the side of MLD compared to the untreated side. Mean score of VAS of pretreatment condition was 35.5 +/- 20.60 mm that decreased to 22 +/- 19.32 mm measured after MLD (p=0.0295). This initial study demonstrates that MLD may promote an improvement of lymph circulation and work in an adjunctive role for reduction of postoperative swelling and pain following removal of impacted third molars.

  20. Properties of blocking and non-blocking monoclonal antibodies specific for human macrophage galactose-type C-type lectin (MGL/ClecSF10A/CD301).

    PubMed

    Sano, Yoshihiko; Usami, Katsuaki; Izawa, Ryota; Denda-Nagai, Kaori; Higashi, Nobuaki; Kimura, Toshifumi; Suzuki, Noriko; Irimura, Tatsuro

    2007-01-01

    Monoclonal antibodies (mAbs) specific for the human macrophage galactose-type calcium-type lectin (MGL) were established. The recombinant extracellular domain of MGL was used to immunize a mouse, and 10 hybridoma clones were obtained. Binding of recombinant MGL to asialo-bovine submaxillary mucin was shown to be blocked by mAbs MLD-1, 4 and 6. Immunoprecipitation of MGL from lysates of COS-1 cells transfected with MGL cDNA (form 6A) was achieved with mAbs MLD-1, 4, 7, 8 and 16. Chimeric recombinant proteins between human MGL and mouse MGL1 were used to determine the location of the epitopes for these mAbs. mAbs MLD-8, 13, 15 and 16 interacted with the amino terminal side of the conserved WVDGTD sequence immediately upstream of QPD, whereas mAbs MLD-7, 12 and 17 interacted with the other side. mAbs MLD-1, 4, and 6 apparently required both sides of this boundary. mAbs MLD-15 and 16 were shown to recognize the protein products of alternatively spliced mRNA 6A/8A and 6C/8A, having deletions at the boundary of exons 7 and 8, in addition to full length and other spliced forms of MGL (6A, 6B and 6C), whereas the other mAbs bound only full length and forms 6A, 6B and 6C.

  1. Induction of ebolavirus cross-species immunity using retrovirus-like particles bearing the Ebola virus glycoprotein lacking the mucin-like domain

    PubMed Central

    2012-01-01

    Background The genus Ebolavirus includes five distinct viruses. Four of these viruses cause hemorrhagic fever in humans. Currently there are no licensed vaccines for any of them; however, several vaccines are under development. Ebola virus envelope glycoprotein (GP1,2) is highly immunogenic, but antibodies frequently arise against its least conserved mucin-like domain (MLD). We hypothesized that immunization with MLD-deleted GP1,2 (GPΔMLD) would induce cross-species immunity by making more conserved regions accessible to the immune system. Methods To test this hypothesis, mice were immunized with retrovirus-like particles (retroVLPs) bearing Ebola virus GPΔMLD, DNA plasmids (plasmo-retroVLP) that can produce such retroVLPs in vivo, or plasmo-retroVLP followed by retroVLPs. Results Cross-species neutralizing antibody and GP1,2-specific cellular immune responses were successfully induced. Conclusion Our findings suggest that GPΔMLD presented through retroVLPs may provide a strategy for development of a vaccine against multiple ebolaviruses. Similar vaccination strategies may be adopted for other viruses whose envelope proteins contain highly variable regions that may mask more conserved domains from the immune system. PMID:22273269

  2. Induction of ebolavirus cross-species immunity using retrovirus-like particles bearing the Ebola virus glycoprotein lacking the mucin-like domain.

    PubMed

    Ou, Wu; Delisle, Josie; Jacques, Jerome; Shih, Joanna; Price, Graeme; Kuhn, Jens H; Wang, Vivian; Verthelyi, Daniela; Kaplan, Gerardo; Wilson, Carolyn A

    2012-01-25

    The genus Ebolavirus includes five distinct viruses. Four of these viruses cause hemorrhagic fever in humans. Currently there are no licensed vaccines for any of them; however, several vaccines are under development. Ebola virus envelope glycoprotein (GP1,2) is highly immunogenic, but antibodies frequently arise against its least conserved mucin-like domain (MLD). We hypothesized that immunization with MLD-deleted GP1,2 (GPΔMLD) would induce cross-species immunity by making more conserved regions accessible to the immune system. To test this hypothesis, mice were immunized with retrovirus-like particles (retroVLPs) bearing Ebola virus GPΔMLD, DNA plasmids (plasmo-retroVLP) that can produce such retroVLPs in vivo, or plasmo-retroVLP followed by retroVLPs. Cross-species neutralizing antibody and GP1,2-specific cellular immune responses were successfully induced. Our findings suggest that GPΔMLD presented through retroVLPs may provide a strategy for development of a vaccine against multiple ebolaviruses. Similar vaccination strategies may be adopted for other viruses whose envelope proteins contain highly variable regions that may mask more conserved domains from the immune system.

  3. Building Knowledge Structures by Testing Helps Children With Mathematical Learning Difficulty.

    PubMed

    Zhang, Yiyun; Zhou, Xinlin

    2016-01-01

    Mathematical learning difficulty (MLD) is prevalent in the development of mathematical abilities. Previous interventions for children with MLD have focused on number sense or basic mathematical skills. This study investigated whether mathematical performance of fifth grade children with MLD could be improved by developing knowledge structures by testing using a web-based curriculum learning system. A total of 142 children with MLD were recruited; half of the children were in the experimental group (using the system), and the other half were in the control group (not using the system). The children were encouraged to use the web-based learning system at home for at least a 15-min session, at least once a week, for one and a half months. The mean accumulated time of testing on the system for children in the experimental group was 56.2 min. Children in the experimental group had significantly higher scores on their final mathematical examination compared to the control group. The results suggest that web-based curriculum learning through testing that promotes the building of knowledge structures for a mathematical course was helpful for children with MLD. © Hammill Institute on Disabilities 2014.

  4. GLUT2 in pancreatic islets: crucial target molecule in diabetes induced with multiple low doses of streptozotocin in mice.

    PubMed

    Wang, Z; Gleichmann, H

    1998-01-01

    In mice, diabetes can be induced by multiple low doses of streptozotocin (MLD-STZ), i.e., 40 mg/kg body wt on each of 5 consecutive days. In this model, diabetes develops only when STZ induces both beta-cell toxicity and T-cell-dependent immune reactions. The target molecule(s) of MLD-STZ-induced beta-cell toxicity are not known, however. In this study, we report that GLUT2 is a target molecule for MLD-STZ toxicity. Ex vivo, a gradual decrement of both GLUT2 protein and mRNA expression was found in pancreatic islets isolated from MLD-STZ-treated C57BL/6 male mice, whereas mRNA expression of beta-actin, glucokinase, and proinsulin remained unaffected. Significant reduction of both GLUT2 protein and mRNA expression was first noted 1 day after the third STZ injection, clearly preceding the onset of hyperglycemia. The extent of reduction increased with the number of STZ injections administered and increased over time, after the last, i.e., fifth, STZ injection. The STZ-induced reduction of GLUT2 protein and mRNA was not due to an essential loss of beta-cells, because ex vivo, not only the total RNA yield and protein content in isolated islets, but also proinsulin mRNA expression, failed to differ significantly in the differently treated groups. Furthermore, islets isolated from MLD-STZ-treated donors responded to the nonglucose secretagogue arginine in a pattern similar to that of solvent-treated donors. Interestingly, the MLD-STZ-induced reduction of both GLUT2 protein and mRNA was prevented by preinjecting mice with 5-thio-D-glucose before each STZ injection. Apparently, GLUT2 is a crucial target molecule of MLD-STZ toxicity, and this toxicity seems to precede the immune reactions against beta-cells.

  5. Continuous quantitative measurement of the proximal airway dimensions and lung density on four-dimensional dynamic-ventilation CT in smokers

    PubMed Central

    Yamashiro, Tsuneo; Moriya, Hiroshi; Tsubakimoto, Maho; Matsuoka, Shin; Murayama, Sadayuki

    2016-01-01

    Purpose Four-dimensional dynamic-ventilation computed tomography (CT) imaging demonstrates continuous movement of the airways and lungs, which cannot be depicted with conventional CT. We aimed to investigate continuous changes in lung density and airway dimensions and to assess the correlation with spirometric values in smokers. Materials and methods This retrospective study was approved by the Institutional Review Board, and informed consent was waived. Twenty-one smokers including six patients with COPD underwent four-dimensional dynamic-ventilation CT during free breathing (160 mm in length). The mean lung density (MLD) of the scanned lung and luminal areas (Ai) of fixed points in the trachea and the right proximal bronchi (main bronchus, upper bronchus, bronchus intermedius, and lower bronchus) were continuously measured. Concordance between the time curve of the MLD and that of the airway Ai values was expressed by cross-correlation coefficients. The associations between these quantitative measurements and the forced expiratory volume in 1 second/forced vital capacity (FEV1/FVC) values were assessed by Spearman’s rank correlation analysis. Results On the time curve for the MLD, the Δ-MLD1.05 values between the peak inspiratory frame to the later third frame (1.05 seconds later) were strongly correlated with the FEV1/FVC (ρ=0.76, P<0.0001). The cross-correlation coefficients between the airway Ai and MLD values were significantly correlated with the FEV1/FVC (ρ=−0.56 to −0.66, P<0.01), except for the right upper bronchus. This suggested that the synchrony between the airway and lung movement was lost in patients with severe airflow limitation. Conclusion Respiratory changes in the MLD and synchrony between the airway Ai and the MLD measured with dynamic-ventilation CT were correlated with patient’s spirometric values. PMID:27110108

  6. Cognitive tutoring induces widespread neuroplasticity and remediates brain function in children with mathematical learning disabilities.

    PubMed

    Iuculano, Teresa; Rosenberg-Lee, Miriam; Richardson, Jennifer; Tenison, Caitlin; Fuchs, Lynn; Supekar, Kaustubh; Menon, Vinod

    2015-09-30

    Competency with numbers is essential in today's society; yet, up to 20% of children exhibit moderate to severe mathematical learning disabilities (MLD). Behavioural intervention can be effective, but the neurobiological mechanisms underlying successful intervention are unknown. Here we demonstrate that eight weeks of 1:1 cognitive tutoring not only remediates poor performance in children with MLD, but also induces widespread changes in brain activity. Neuroplasticity manifests as normalization of aberrant functional responses in a distributed network of parietal, prefrontal and ventral temporal-occipital areas that support successful numerical problem solving, and is correlated with performance gains. Remarkably, machine learning algorithms show that brain activity patterns in children with MLD are significantly discriminable from neurotypical peers before, but not after, tutoring, suggesting that behavioural gains are not due to compensatory mechanisms. Our study identifies functional brain mechanisms underlying effective intervention in children with MLD and provides novel metrics for assessing response to intervention.

  7. Three subdivisions of the auditory midbrain in chicks (Gallus gallus) identified by their afferent and commissural projections

    PubMed Central

    Wang, Yuan; Karten, Harvey J.

    2010-01-01

    The auditory midbrain is a site of convergence of multiple auditory channels from the brainstem. In birds, two separate ascending channels have been identified, through which time and intensity information is sent to nucleus mesencephalicus lateralis, pars dorsalis (MLd), the homologue of the central nucleus of mammalian inferior colliculus. Using in vivo anterograde and retrograde tracing techniques, the current study provides two lines of anatomical evidence supporting the presence of a third ascending channel to the chick MLd. First, three non-overlapping zones of MLd receive inputs from three distinct cell groups in the caudodorsal brainstem. The projections from nucleus angularis (NA) and nucleus laminaris (NL) are predominately contralateral and may correspond to the time and intensity channels. A rostromedial portion of MLd receives bilateral projections mainly from the Regio Intermedius, an interposed region of cells lying at a caudal level between NL and NA, as well as scattered neurons embedded in 8th nerve tract, and probably a very ventral region of NA. Second, the bilateral zones of MLd on two sides of the brain are reciprocally connected and do not interact with other zones of MLd via commissural connections. In contrast, the NL-recipient zone projects contralaterally upon the NA-recipient zone. The structural separation of the third pathway from the NA and NL projections suggests a third information-processing channel, in parallel with the time and intensity channels. Neurons in the third channel appear to process very low frequency information including infrasound, probably utilizing different mechanisms than that underlying higher frequency processing. PMID:20148439

  8. Estimation of Surface Seawater Fugacity of Carbon Dioxide Using Satellite Data and Machine Learning

    NASA Astrophysics Data System (ADS)

    Jang, E.; Im, J.; Park, G.; Park, Y.

    2016-12-01

    The ocean controls the climate of Earth by absorbing and releasing CO2 through the carbon cycle. The amount of CO2 in the ocean has increased since the industrial revolution. High CO2 concentration in the ocean has a negative influence to marine organisms and reduces the ability of absorbing CO2 in the ocean. This study estimated surface seawater fugacity of CO2 (fCO2) in the East Sea of Korea using Geostationary Ocean Color Imager (GOCI) and Moderate Resolution Imaging Spectroradiometer (MODIS) satellite data, and Hybrid Coordinate Ocean Model (HYCOM) reanalysis data. GOCI is the world first geostationary ocean color observation satellite sensor, and it provides 8 images with 8 bands hourly per day from 9 am to 4 pm at 500m resolution. Two machine learning approaches (i.e., random forest and support vector regression) were used to model fCO2 in this study. While most of the existing studies used multiple linear regression to estimate the pressure of CO2 in the ocean, machine learning may handle more complex relationship between surface seawater fCO2 and ocean parameters in a dynamic spatiotemporal environment. Five ocean related parameters, colored dissolved organic matter (CDOM), chlorophyll-a (chla), sea surface temperature (SST), sea surface salinity (SSS), and mixed layer depth (MLD), were used as input variables. This study examined two schemes, one with GOCI-derived products and the other with MODIS-derived ones. Results show that random forest performed better than support vector regression regardless of satellite data used. The accuracy of GOCI-based estimation was higher than MODIS-based one, possibly thanks to the better spatiotemporal resolution of GOCI data. MLD was identified the most contributing parameter in estimating surface seawater fCO2 among the five ocean related parameters, which might be related with an active deep convection in the East Sea. The surface seawater fCO2 in summer was higher in general with some spatial variation than the other seasons because of higher SST.

  9. Shear wave velocity and radial anisotropy beneath the Wyoming craton: craton destruction and lithospheric layering

    NASA Astrophysics Data System (ADS)

    Dave, R.; Li, A.

    2016-12-01

    The Wyoming craton has evolved under an intriguing geological history with suture zones, accreted margins, flat-slab subduction, orogeny and an encroaching hotspot. Whether and how the cratonic root has been widely destroyed by the series of tectonic events remain controversial. Aiming to address these questions using a craton-wide model, we have analyzed Rayleigh and Love wave data from 75 earthquakes recorded by 103 USArray TA stations in the Wyoming craton. 2-D phase velocity maps are constructed for 18 periods from 20 s to 166 s using the two-plane-wave tomography. The Yellowstone hotspot and the Cheyenne belt are characterized by low velocity anomalies at all periods in both Rayleigh and Love wave models. The northern craton in Montana is broadly fast at periods < 70 s and is relatively slow at longer periods, suggesting a shallower lithosphere. The fast anomaly in Wyoming has a NE-SW trend and extends to more than 200 km in the VSV model. However, such a fast anomaly is largely absent in the Love wave images at long periods. The association of VSV>VSH with this deep fast anomaly indicates mantle downwelling beneath south-central Wyoming. Mantle upwelling likely happens in slow regions at the hotspot, the Cheyenne belt, and the northeastern craton. The overall pattern of velocity anomaly and radial anisotropy suggests that small-scale mantle convection is vigorously acting beneath the Wyoming craton and continuously destructing the cratonic lithosphere. In addition, the average VSV and VSH models show a strong positive radial anisotropy of 5% (VSH>VSV) above 100 km and a weak negative anisotropy (VSV>VSH) below 120 km. Such a significant change in radial anisotropy could contribute to the observed mid-lithosphere discontinuity (MLD) from receiver functions. Both VSV and VSH reveal a fast lid above 100 km and a large velocity reduction at the depths of 115-190 km, corresponding with a lithosphere-asthenosphere boundary (LAB) at 150 km. These observations suggest different origins of the MLD and the LAB.

  10. Use of nicotine patches in breast-feeding mothers: transfer of nicotine and cotinine into human milk.

    PubMed

    Ilett, Kenneth F; Hale, Thomas W; Page-Sharp, Madhu; Kristensen, Judith H; Kohan, Rolland; Hackett, L Peter

    2003-12-01

    Our objective was to assess the extent of exposure to nicotine and cotinine in breast-fed infants during maternal smoking and later during maternal use of the nicotine transdermal patch to achieve smoking cessation. Fifteen lactating women (mean age, 32 years; mean weight, 72 kg) who were smokers (mean of 17 cigarettes per day) participated in a trial of the nicotine patch to assist in smoking cessation. Serial milk samples were collected from the women over sequential 24-hour periods when they were smoking and when they were stabilized on the 21-mg/d, 14-mg/d, and 7-mg/d nicotine patches. Nicotine and cotinine in milk were quantified by HPLC, and infant dose was calculated. Plasma concentrations of nicotine in the breast-fed infants were assessed, and the infants were also clinically assessed. Nicotine and cotinine concentrations in milk were not significantly different between smoking (mean of 17 cigarettes per day) and the 21-mg/d patch, but concentrations were significantly lower (P <.05) when patients were using the 14-mg/d and 7-mg/d patches than when smoking. There was also a downward trend in absolute infant dose (nicotine equivalents) from smoking or the 21-mg patch through to the 14-mg and 7-mg patches (P <.05 at both 14-mg and 7-mg doses, compared with smoking). Milk intake (shown as median and 25th to 75th percentile) by the breast-fed infants was similar while their mothers were smoking (585 mL/d [507-755 mL/d]) and subsequently when their mothers were using the 21-mg (717 mL/d [504-776 mL/d]), 14-mg (731 mL/d [535-864 mL/d]), and 7-mg (619 mL/d [520-706 mL/d]) patches (chi(2) = 3.19, P =.364). We conclude that the absolute infant dose of nicotine and its metabolite cotinine decreases by about 70% from when subjects were smoking or using the 21-mg patch to when they were using the 7-mg patch. In addition, use of the nicotine patch had no significant influence on the milk intake by the breast-fed infant. Undertaking maternal smoking cessation with the nicotine patch is, therefore, a safer option than continued smoking.

  11. WE-AB-207B-12: Prospective Study of the Relationship Between Dose-Volume Clinical Toxicity and Patient Reported Outcomes in Lung Cancer Patients Treated with SBRT

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mayyas, E; Vance, S; Brown, S

    Purpose: To determine in a prospective study, the correlation between radiation dose/volume, clinical toxicities and patient-reported, quality of life (QOL) resulting from lung SBRT. Methods: For 106 non-small cell lung cancer (NSCLC) patients receiving SBRT (12 Gy × 4), symptoms including cough, dyspnea, fatigue and pneumonitis were measured at baseline (before treatment), after treatment and 3, 6, and 12 months post-treatment. Toxicity was graded from zero to five. Dosimetric parameters such as the MLD, D10%, D20%, and lung subvolumes (V10 and V20) were obtained from the treatment plan. Dosimetric parameters and number of patients demonstrating toxicity ≥ grade 2 weremore » tabulated. Linear regression analysis was used to calculate correlations between MLD and D10, D20, V10 and V20. Results: The percentages of patients with > grade 2 pneumonitis, fatigue, cough, and dyspnea over 3 to 12 months increased from 0.0% to 3.5%, 3.2% to 10.5%, 4.3% to 8.3%, and 10.8% to 18.8%, respectively. Computed dose indices D10%, D20% were 7.9±4.8 Gy and 3.0±2.3 Gy, respectively. MLD ranged from 0.34 Gy up to 9.9 Gy with overall average 3.0±1.7 Gy. The averages of the subvolumes V10 and V20 were respectively 8.9±5.3% and 3.0±2.4%. The linear regression analysis showed that V10 and D10 demonstrated the strongest correlation to MLD; R2= 0.92 and 0.87, respectively. V20, and D20 were also strongly correlated with MLD; R2 = 0.81 and 0.84 respectively. A correlation was also found to exist between MLD > 2 Gy and ≥ grade 2 cough and dyspnea. Subvolume values for 2Gy MLD were 5.3% for V10 and 2% for V20. Conclusion: Dosimetric indices: MLD ≥ 2Gy, D10 ≥ 5Gy and V10 ≥ 5% of the total lung volume were predictive of > grade 2 cough and dyspnea QOL data. The QOL results are a novel component of this work. acknowledgement of the Varian grant support.« less

  12. Implications of a-priori constraints in transdimensional Bayesian inversion for continental lithospheric layering

    NASA Astrophysics Data System (ADS)

    Roy, Corinna; Calo, Marco; Bodin, Thomas; Romanowicz, Barbara

    2017-04-01

    Competing hypotheses for the formation and evolution of continents are highly under debate, including the theory of underplating by hot plumes or accretion by shallow subduction in continental or arc settings. In order to support these hypotheses, documenting structural layering in the cratonic lithosphere becomes especially important. Studies of seismic-wave receiver function data have detected a structural boundary under continental cratons at 100-140 km depths, which is too shallow to be consistent with the lithosphere-asthenosphere boundary, as inferred from seismic tomography and other geophysical studies. This leads to the conclusion that 1) the cratonic lithosphere may be thinner than expected, contradicting tomographic and other geophysical or geochemical inferences, or 2) that the receiver function studies detect a mid-lithospheric discontinuity rather than the LAB. Recent studies (Bodin et al., 2015, Calò et al. 2016) confirmed the presence of a structural boundary under the North American craton at 100-140 km depths by taking advantage of the power of a trans-dimensional Monte Carlo Markov chain (TMCMC). They generated probabilistic 1D radially shear wave velocity profiles for selected stations in North America by jointly inverting 2 different data types (PS Receiver Functions, surface wave dispersion for Love and Rayleigh waves), which sample different volumes of the Earth and have different sensitivities to 
structure. In fact, they found at least one, and in some cases several additional mid-lithospheric discontinuities (MLD) at intermediate depths in the stable part of the craton. Such discontinuities are not present in the active western part of the US. However, in their Bayesian approach, they made two major assumptions: First, they fixed the Vp/Vs ratio to a constant, averaged value for crust and mantle. Second, they added constraints on the crustal discontinuity depths in the prior distribution of the shear wave velocity. Given these strong assumptions, the question came up whether the observed MLDs are real features or only artifacts resulting from these assumptions, in spite of the fact that the Ps converted phase constraints are included using a waveform cross-convolution approach, which should be able to handle crustal multiples, in contrast to a standard RF inversion. We investigated these concerns by including the Vp/Vs ratio as a random variable in the Bayesian approach. By performing simulations on synthetic Earth models, we can demonstrate that a variable/fixed Vp/Vs ratio has little effect on posterior distribution of VSV, but that the imposed constraints can introduce artificial layers in depth. Nevertheless, we can confirm the overall structure found by Calò et al. 2016. Here, we also include SKS waveforms in the joint inversion and invert for azimuthal anisotropy to verify if layering in the anisotropic structure of the stable part of the North American continent is marked by significant changes in the direction of azimuthal anisotropy as found by Yuan and Romanowicz (2010). We recently demonstrated the power of this approach in the case of two stations located in different tectonic settings (Bodin et al., 2016). Here we extend this approach to a broader range of settings within the North American continent.

  13. Visible region MCD and MLD spectra of nitrosylferrohemoglobin and oxyhemoglobin.

    PubMed

    Pearce, Linda L; Bominaar, Emile L; Peterson, Jim

    2002-09-20

    Magnetic circular dichroism (MCD) and magnetic linear dichroism (MLD) spectroscopies at various applied magnetic fields (0-6T) and temperatures (2.0-31K) have been used to investigate the electronic properties of the visible (Q(0-0), or alpha band) region of oxy- and nitrosylferrohemoglobin (HbNO). OxyHb, a d(6) (S=0) diamagnet, exhibits the expected pseudo-first derivative MCD and pseudo-second derivative MLD temperature-independent features centered at 574nm. HbNO, a d(7) (S=1/2) paramagnet, also exhibits a temperature-independent pseudo-first derivative MCD spectrum, but centered at 571nm. So far as we are aware, this behavior is unprecedented in the MCD spectra of paramagetic iron-porphyrins, which are expected to be dominated by temperature-dependent C(0) terms. The HbNO MCD spectrum does, however, demonstrate limited field-dependent saturation magnetization behavior and the MLD spectrum is currently below the detection limit. In addition, an MCD signal from reoxygenated venous blood is reported and compared with MCD signals from oxy- and HbNO derivatives. Finally, a combination of MCD and MLD spectroscopies has been used to estimate the orbital angular momentum (M(L)) value of the alpha band excited state of oxyHb as 4.2 (+/-0.7).

  14. The role of off-frequency masking in binaural hearing

    PubMed Central

    Buss, Emily; Hall, Joseph W.

    2010-01-01

    The present studies examined the binaural masking level difference (MLD) for off-frequency masking. It has been shown previously that the MLD decreases steeply with increasing spectral separation between a pure tone signal and a 10-Hz wide band of masking noise. Data collected here show that this reduction in the off-frequency MLD as a function of signal∕masker separation is comparable at 250 and 2500 Hz, indicating that neither interaural phase cues nor frequency resolution are critical to this finding. The MLD decreases more gradually with spectral separation when the masker is a 250-Hz-wide band of noise, a result that implicates the rate of inherent amplitude modulation of the masker. Thresholds were also measured for a brief signal presented coincident with a local masker modulation minimum or maximum. Sensitivity was better in the minima for all NoSπ and off-frequency NoSo conditions, with little or no effect of signal position for on-frequency NoSo conditions. Taken together, the present results indicate that the steep reduction in the off-frequency MLD for a narrowband noise masker is due at least in part to envelope cues in the NoSo conditions. There was no evidence of a reduction in binaural cue quality for off-frequency masking. PMID:20550265

  15. Limited knowledge of fraction representations differentiates middle school students with mathematics learning disability (dyscalculia) vs. low mathematics achievement

    PubMed Central

    Mazzocco, Michèle M. M.; Myers, Gwen F.; Lewis, Katherine E.; Hanich, Laurie B.; Murphy, Melissa M.

    2014-01-01

    Fractions pose significant challenges for many children, but for some children those challenges persist into high school. Here we administered a fractions magnitude comparison test to 122 children, from Grades 4 to 8, to test whether their knowledge of fractions typically learned early in the sequence of formal math instruction (e.g., fractions equivalent to “one-half,” and fraction pairs with common denominators) differentiates those with mathematical learning disability (MLD) versus low achievement (LA) or typical achievement (TA) in mathematics, and whether long term learning trajectories of this knowledge also differentiate these groups. We confirmed that although 4th graders with LA (n = 18) or TA (n = 93) are more accurate evaluating one-half vs. non-half fractions (until they reach ceiling performance levels on both types of fractions), children with MLD (n=11) do not show a one-half advantage until Grade 7 and do not reach ceiling performance even by Grade 8. Both the MLD and LA groups have early difficulties with fractions, but by Grade 5 the LA group approaches performance levels of the TA group and deviates from the MLD group. All groups showed a visual model advantage over Arabic number representation of fractions, but this advantage was short lived for the TA group (because ceiling level was achieved across formats), slightly more persistent for the LA group, and persisted through Grade 8 for children with MLD. Thus, difficulties with fractions persist through Grade 8 for many students, but the nature and trajectories of those difficulties varies across children with math difficulties (MLD or LA). PMID:23587941

  16. ACTN3 R577X genotype and performance of elite middle-long distance swimmers in China

    PubMed Central

    Li, YC; Wang, LQ; Yi, LY; Liu, JH; Lu, YF; Wang, M

    2016-01-01

    The ACTN3 gene is one of the genes that have a potential influence on physical performance. Studies have shown that the 577R genotype of ACTN3 is more prevalent in sprint athletes, while the 577X genotype is more prevalent in endurance athletes. In swimming, both power and endurance related phenotypes are equally needed for swimmers to excel at the elite level. Therefore, the ACTN3 R577X polymorphism may become a genetic marker for swimmers. The study aimed to examine the association of the ACTN3 R577X genotype with the performance of elite middle-long distance (MLD) swimmers. The distributions of the ACTN3 R577X (rs1815739) genotype and allele were examined in a general population (206) and a group of elite MLD swimmers (160) in China by using PCR-RFLP and TOF. Compared with the general population, the elite MLD swimmers, especially the females, had a higher frequency of the RR genotype. The swimmers had a higher frequency of the R allele than the general population. However, the difference was not statistically significant. After being stratified by performance, the difference of the R allele frequency between the international master athletes and the general population was statistically significant. The elite MLD swimmers had a higher frequency of the RR genotype than the RX+XX genotype compared with the general population. The ACTN3 R577X polymorphism was associated with the performance of elite MLD swimmers in China. The SNP R577X could be used as a biomarker for selecting elite MLD swimmers in China. PMID:28416896

  17. Apolipoprotein E genotype and LRP1 polymorphisms in patients with different clinical types of metachromatic leukodystrophy.

    PubMed

    Ługowska, Agnieszka; Musielak, Małgorzata; Jamroz, Ewa; Pyrkosz, Antoni; Kmieć, Tomasz; Tylki-Szymańska, Anna; Bednarska-Makaruk, Małgorzata

    2013-09-10

    Metachromatic leukodystrophy (MLD) is a severe, neurodegenerative, metabolic disease which is caused by deficient activity of arylsulfatase A (ARSA). Sulfatides and other substrates of ARSA are stored in central and peripheral nervous systems, and in some other organs. Accumulated sulfatides are especially toxic to oligodendrocytes and Schwann cells leading to progressive demyelination. The kind of apolipoprotein E (apoE) isoform is of essential significance for the modulation of sulfatide quantity in the brain as apoE4 contains more sulfatides than apoE3. Taking into consideration the fact that apoE4 leads to the loss of sulfatides in CSF of Alzheimer's disease patients, we examined if apoE isoforms display any impact on clinical outcome in patients with different forms of MLD in whom sulfatides accumulate. The significant association of age at the onset of MLD symptoms with APOE ε2/ε3/ε4 and LRP1 c.766C>T polymorphisms was shown in multivariate stepwise regression analysis, in which other factors known to affect age at onset of the disease, i.e. clinical type of MLD, family connection of the patient and sex were also analyzed. As expected, the clinical type of MLD explained about 80% of the variance of the dependent variable. The impact of both polymorphisms on age of onset of the disease was considerably lower: 2.0% in the case of APOE polymorphism and 1.0% in the case of LRP1 polymorphism. Thus, the clinical outcome in MLD patients is related principally to the genotype of the ARSA gene, while the polymorphisms in the APOE and LRP1 genes are only slightly modifying factors. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Limited knowledge of fraction representations differentiates middle school students with mathematics learning disability (dyscalculia) versus low mathematics achievement.

    PubMed

    Mazzocco, Michèle M M; Myers, Gwen F; Lewis, Katherine E; Hanich, Laurie B; Murphy, Melissa M

    2013-06-01

    Fractions pose significant challenges for many children, but for some children those challenges persist into high school. Here we administered a fractions magnitude comparison test to 122 children, from Grades 4 to 8, to test whether their knowledge of fractions typically learned early in the sequence of formal math instruction (e.g., fractions equivalent to one-half, fraction pairs with common denominators) differentiates those with mathematics learning disability (MLD) versus low achievement (LA) or typical achievement (TA) in mathematics and whether long-term learning trajectories of this knowledge also differentiate these groups. We confirmed that although fourth graders with TA (n=93) were more accurate in evaluating "one-half" fractions than in evaluating "non-half" fractions (until they reached ceiling performance levels on both types of fractions), children with MLD (n=11) did not show a one-half advantage until Grade 7 and did not reach ceiling performance even by Grade 8. Both the MLD and LA groups had early difficulties with fractions, but by Grade 5 the LA group approached performance levels of the TA group and deviated from the MLD group. All groups showed a visual model advantage over Arabic number representation of fractions, but this advantage was short-lived for the TA group (because ceiling level was achieved across formats), whereas it was slightly more persistent for the LA group and persisted through Grade 8 for children with MLD. Thus, difficulties with fractions persist through Grade 8 for many students, but the nature and trajectories of those difficulties vary across children with math difficulties (MLD or LA). Copyright © 2013 Elsevier Inc. All rights reserved.

  19. Cognitive tutoring induces widespread neuroplasticity and remediates brain function in children with mathematical learning disabilities

    PubMed Central

    Iuculano, Teresa; Rosenberg-Lee, Miriam; Richardson, Jennifer; Tenison, Caitlin; Fuchs, Lynn; Supekar, Kaustubh; Menon, Vinod

    2015-01-01

    Competency with numbers is essential in today's society; yet, up to 20% of children exhibit moderate to severe mathematical learning disabilities (MLD). Behavioural intervention can be effective, but the neurobiological mechanisms underlying successful intervention are unknown. Here we demonstrate that eight weeks of 1:1 cognitive tutoring not only remediates poor performance in children with MLD, but also induces widespread changes in brain activity. Neuroplasticity manifests as normalization of aberrant functional responses in a distributed network of parietal, prefrontal and ventral temporal–occipital areas that support successful numerical problem solving, and is correlated with performance gains. Remarkably, machine learning algorithms show that brain activity patterns in children with MLD are significantly discriminable from neurotypical peers before, but not after, tutoring, suggesting that behavioural gains are not due to compensatory mechanisms. Our study identifies functional brain mechanisms underlying effective intervention in children with MLD and provides novel metrics for assessing response to intervention. PMID:26419418

  20. Gallbladder and the risk of polyps and carcinoma in metachromatic leukodystrophy.

    PubMed

    van Rappard, Diane F; Bugiani, Marianna; Boelens, Jaap J; van der Steeg, Alida F W; Daams, Freek; de Meij, Tim G J; van Doorn, Martine M A C; van Hasselt, Peter M; Gouma, Dirk J; Verbeke, Jonathan I M L; Hollak, Carla E M; van Hecke, Wim; Salomons, Gajja S; van der Knaap, Marjo S; Wolf, Nicole I

    2016-07-05

    To assess frequency of gallbladder polyposis and carcinoma in metachromatic leukodystrophy (MLD). We evaluated 34 patients with MLD (average age 16.7 years, age range 2-39 years) screened for gallbladder abnormalities by ultrasound. In the case of cholecystectomy, findings at pathology were reviewed. Only 8 of 34 patients (23%) had a normal gallbladder at ultrasound. Gallbladder polyps were visible in 8 patients (23%). Cholecystectomy was performed in 11 patients (32%). In these, pathology revealed various abnormalities, including hyperplastic polyps, intestinal metaplasia, prominent Rokitansky-Aschoff sinuses, and sulfatide storage. Our results demonstrate that gallbladder involvement is the rule rather than the exception in MLD. The high prevalence of hyperplastic polyps, a known precancerous condition, and one death from gallbladder carcinoma at a young age suggest that MLD predisposes to neoplastic gallbladder abnormalities. As novel therapies for this patient group are emerging leading to increased life expectancy, we recommend screening for gallbladder abnormalities by ultrasound in order to prevent early death. © 2016 American Academy of Neurology.

  1. Medical and Transmission Vector Vocabulary Alignment with Schema.org

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Smith, William P.; Chappell, Alan R.; Corley, Courtney D.

    Available biomedical ontologies and knowledge bases currently lack formal and standards-based interconnections between disease, disease vector, and drug treatment vocabularies. The PNNL Medical Linked Dataset (PNNL-MLD) addresses this gap. This paper describes the PNNL-MLD, which provides a unified vocabulary and dataset of drug, disease, side effect, and vector transmission background information. Currently, the PNNL-MLD combines and curates data from the following research projects: DrugBank, DailyMed, Diseasome, DisGeNet, Wikipedia Infobox, Sider, and PharmGKB. The main outcomes of this effort are a dataset aligned to Schema.org, including a parsing framework, and extensible hooks ready for integration with selected medical ontologies. The PNNL-MLDmore » enables researchers more quickly and easily to query distinct datasets. Future extensions to the PNNL-MLD will include Traditional Chinese Medicine, broader interlinks across genetic structures, a larger thesaurus of synonyms and hypernyms, explicit coding of diseases and drugs across research systems, and incorporating vector-borne transmission vocabularies.« less

  2. The relationship between vocabulary, grammar, and false belief task performance in children with autistic spectrum disorders and children with moderate learning difficulties.

    PubMed

    Fisher, Naomi; Happé, Francesca; Dunn, Judy

    2005-04-01

    The aim of this study was to examine the relationship between language and theory of mind in children with autistic spectrum disorders (ASD) and children with moderate learning difficulties (MLD). Previous studies have found a strong association between language and theory of mind in a range of groups, but mostly have not included measures of both grammar and vocabulary; including these enables us to speculate about the causal direction of the relationship. Fifty-eight children with ASD and 118 children with MLD were given standardised assessments of vocabulary and grammar, along with standard theory of mind tasks. The relationship between language and theory of mind was more evident in children with ASD than in those with MLD, and grammar was a particularly strong predictor of theory of mind performance in children with ASD. Children with MLD performed better on false belief (FB) tasks than did children with ASD, and their performance was more predictable across the different theory of mind tasks. Language, in particular grammar, and theory of mind appear to be more strongly related in children with ASD than in those with MLD. We speculate that this relationship may be causal, with some grammatical understanding being a precursor of theory of mind. The implications of these findings are discussed in relation to possible routes for compensatory strategies for mentalising in children with ASD.

  3. Impaired Acuity of the Approximate Number System Underlies Mathematical Learning Disability (Dyscalculia)

    ERIC Educational Resources Information Center

    Mazzocco, Michele M. M.; Feigenson, Lisa; Halberda, Justin

    2011-01-01

    Many children have significant mathematical learning disabilities (MLD, or dyscalculia) despite adequate schooling. The current study hypothesizes that MLD partly results from a deficiency in the Approximate Number System (ANS) that supports nonverbal numerical representations across species and throughout development. In this study of 71 ninth…

  4. Accounting for pore water pressure and confined aquifers in assessing the stability of slopes: a Limit Equilibrium analysis carried out through the Minimum Lithostatic Deviation method

    NASA Astrophysics Data System (ADS)

    Ausilia Paparo, Maria; Tinti, Stefano

    2015-04-01

    The model we introduce is an implementation of the Minimum Lithostatic Deviation (MLD) method, developed by Tinti and Manucci (Tinti and Manucci 2006; 2008), that makes use of the limit equilibrium (LE) theory to estimate the stability of a slope. The main purpose here is to analyse the role of a confined aquifer on the value of the Safety Factor (F), the parameter that in the LE is used to determine if a slope is stable or unstable. The classical LE methods treat unconfined aquifers by including the water pore pressure in the Mohr-Coulomb failure formula: since the water decreases the friction shear strength, the soil above the sliding surface turns out to be more prone to instability. In case of a confined aquifer, however, due to a presence of impermeable layers, the water is not free to flow into the matrix of the overlying soil. We consider here the assumption of a permeable soil sliding over an impermeable layer, which is an occurrence that is found in several known landslide cases (e.g. Person, 2008; Strout and Tjeltja, 2008; Morgan et al., 2010 for offshore slides; and Palladino and Peck, 1972; Miller and Sias, 1998; Jiao et al. 2005; Paparo et al., 2013 for slopes in proximity of artificial or natural water basins) where clay beds form the potential sliding surface: the water, confined below, pushes along these layers and acts on the sliding body as an external bottom load. We modify the MLD method equations in order to take into account the load due to a confined aquifer and apply the new model to the Vajont case, where many have hypothesised the contribution of a confined aquifer to the failure. Our calculations show that the rain load i) infiltrating directly into the soil body and ii) penetrating into the confined aquifer below the clay layers, in addition with the lowering of the reservoir level, were key factors of destabilization of the Mt Toc flank and caused the disastrous landslide.

  5. The Effect of Otitis Media with Effusion on the Masking-Level Difference and the Auditory Brainstem Response.

    ERIC Educational Resources Information Center

    Hall, Joseph W.; Grose, John H.

    1993-01-01

    This study of 14 children (ages 5-9) with a history of otitis media with effusion found that subjects had significantly reduced masking-level differences (MLD) compared to controls. Results suggest that the reduction in MLD may be related to abnormal brainstem processing. (Author/JDD)

  6. Mathematical Learning Disabilities in Special Populations: Phenotypic Variation and Cross-Disorder Comparisons

    ERIC Educational Resources Information Center

    Dennis, Maureen; Berch, Daniel B.; Mazzocco, Michele M. M.

    2009-01-01

    What is mathematical learning disability (MLD)? The reviews in this special issue adopt different approaches to defining the construct of MLD. Collectively, they demonstrate the current status of efforts to establish a consensus definition and the challenges faced in this endeavor. In this commentary, we reflect upon the proposed pathways to…

  7. Gene Therapy for Metachromatic Leukodystrophy

    PubMed Central

    Rosenberg, Jonathan B.; Kaminsky, Stephen M.; Aubourg, Patrick; Crystal, Ronald G.; Sondhi, Dolan

    2016-01-01

    Summary Leukodystrophies are rare white matter genetic disorders of the central nervous system (CNS) with progressive neurologic deterioration. One approach to the treatment of leukodystrophies is by gene therapy. Using metachromatic leukodystrophy (MLD), a leukodystrophy resulting from deficiency of a lysosomal catabolic enzyme arylsulfatase A (ARSA) as the example, this review is focused on the current status of preclinical and clinical development of gene therapy as a viable treatment option for leukodystrophies. In MLD, mutations in the ARSA gene result in excess buildup of sulfatides, which triggers apoptosis of glia and neurons. The disease is characterized by severe cerebral demyelination and atrophy, with progressive loss of oligodendrocytes, neurons and Schwann cells. The optimal therapy for MLD would provide persistent and high level expression of ARSA in the CNS. Gene therapy using adeno-associated virus (AAV) is an ideal choice for clinical development as it provides the best balance of potential for efficacy with a reduced safety risk profile. In this review, we have summarized preclinical data that support the use of a gene therapy with the AAVrh.10 serotype for clinical development as a treatment for MLD. PMID:27638601

  8. Connections of the Auditory Brainstem in a Songbird, Taeniopygia guttata. III. Projections of the Superior Olive and Lateral Lemniscal Nuclei

    PubMed Central

    Wild, J. Martin; Krützfeldt, Nils O.E.; Kubke, M. Fabiana

    2013-01-01

    Sequential to companion articles that report the projections of the cochlear nucleus angularis (NA) and the third-order nucleus laminaris (NL) to the central nucleus of the inferior colliculus (MLd) and to the superior olive (OS) and lateral lemniscal nuclei (LLV, LLI, and LLD) (Krützfeldt et al., J Comp Neurol, this issue), we here describe the projections of the latter group of nuclei using standard tract-tracing methods. OS projects on LLV and both have further ascending projections on LLI, LLD, and MLd. LLV also provides auditory input to the song system, via nucleus uvaeformis, and to the thalamo-telencephalic auditory system, via nucleus ovoidalis (Ov), thus bypassing MLd. The two divisions of LLD (LLDa and LLDp) project across the midline via the commissure of Probst each to innervate the homologous contralateral nucleus and MLd. Both, particularly LLDp, also project on Ov. Injections in LLD and LLV resulted in anterograde labeling of caudal nucleus basorostralis (Bas) in the frontal telencephalon, but retrograde tracing so far suggests that only LLI is a real source of this projection (Wild and Farabaugh [1996] J Comp Neurol 365:306–328). OS and LLV also have descending projections on the ipsilateral NA, NM, and NL, and LLV also projects on OS. The ascending inputs to MLd and more rostral nuclei may contribute importantly to mechanisms of auditory pattern (song) recognition. Consistent with previous studies, some of the descending projections may be inhibitory. PMID:20394063

  9. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Jingbo; Department of Radiation Oncology, Cancer Hospital, Chinese Academic Medical Sciences and Peking Union Medical College, Beijing; Cao, Jianzhong

    Purpose: Poor pulmonary function (PF) is often considered a contraindication to definitive radiation therapy for lung cancer. This study investigated whether baseline PF was associated with radiation-induced lung toxicity (RILT) in patients with non-small cell lung cancer (NSCLC) receiving conformal radiation therapy (CRT). Methods and Materials: NSCLC patients treated with CRT and tested for PF at baseline were eligible. Baseline predicted values of forced expiratory volume in 1 sec (FEV1), forced vital capacity (FVC), and diffusion capacity of lung for carbon monoxide (DLCO) were analyzed. Additional factors included age, gender, smoking status, Karnofsky performance status, coexisting chronic obstructive pulmonary diseasemore » (COPD), tumor location, histology, concurrent chemotherapy, radiation dose, and mean lung dose (MLD) were evaluated for RILT. The primary endpoint was symptomatic RILT (SRILT), including grade ≥2 radiation pneumonitis and fibrosis. Results: There was a total of 260 patients, and SRILT occurred in 58 (22.3%) of them. Mean FEV1 values for SRILT and non-SRILT patients were 71.7% and 65.9% (P=.077). Under univariate analysis, risk of SRILT increased with MLD (P=.008), the absence of COPD (P=.047), and FEV1 (P=.077). Age (65 split) and MLD were significantly associated with SRILT in multivariate analysis. The addition of FEV1 and age with the MLD-based model slightly improved the predictability of SRILT (area under curve from 0.63-0.70, P=.088). Conclusions: Poor baseline PF does not increase the risk of SRILT, and combining FEV1, age, and MLD may improve the predictive ability.« less

  10. Intravascular Ultrasound and Angiographic Predictors of In-Stent Restenosis of Chronic Total Occlusion Lesions.

    PubMed

    Kang, Jeehoon; Cho, Young-Seok; Kim, Seong-Wook; Park, Jin Joo; Yoon, Yeonyee E; Oh, Il-Young; Yoon, Chang-Hwan; Suh, Jung-Won; Youn, Tae-Jin; Chae, In-Ho; Choi, Dong-Ju

    2015-01-01

    Despite the benefits of successful percutaneous coronary interventions (PCIs) for chronic total occlusion (CTO) lesions, PCIs of CTO lesions still carry a high rate of adverse events, including in-stent restenosis (ISR). Because previous reports have not specifically investigated the intravascular ultrasound (IVUS) predictors of ISR in CTO lesions, we focused on these predictors. We included 126 patients who underwent successful PCIs, using drug-eluting stents, and post-PCI IVUS of CTO lesions. Patient and lesion characteristics were analyzed to elucidate the ISR predictors. In each lesion, an average of 1.7 ± 0.7 (mean length, 46.4 ± 20.3 mm) stents were used. At 9 months follow-up, 14 (11%) patients demonstrated ISR, and 8 (6.3%) underwent target lesion revascularization. Multivariate logistic regression analysis showed that the independent predictors of ISR were the post-PCI minimal luminal diameter (MLD) and the stent expansion ratio (SER; minimal stent cross-sectional area (CSA) over the nominal CSA of the implanted stent), measured using quantitative coronary angiography (QCA) and IVUS, respectively. A receiver operating characteristic analysis indicated that the best post-PCI MLD and SER cut-off values for predicting ISR were 2.4 mm (area under the curve [AUC], 0.762; 95% confidence interval (CI), 0.639-0.885) and 70% (AUC, 0.714; 95% CI, 0.577-0.852), respectively. Lesions with post-PCI MLD and SER values less than these threshold values were at a higher risk of ISR, with an odds ratio of 23.3 (95% CI, 2.74-198.08), compared with lesions having larger MLD and SER values. Thus, the potential predictors of ISR, after PCI of CTO lesions, are the post-PCI MLD and SER values. The ISR rate was highest in lesions with a post-PCI MLD ≤2.4 mm and an SER ≤70%.

  11. Predicting pneumonitis risk: a dosimetric alternative to mean lung dose.

    PubMed

    Tucker, Susan L; Mohan, Radhe; Liengsawangwong, Raweewan; Martel, Mary K; Liao, Zhongxing

    2013-02-01

    To determine whether the association between mean lung dose (MLD) and risk of severe (grade ≥3) radiation pneumonitis (RP) depends on the dose distribution pattern to normal lung among patients receiving 3-dimensional conformal radiation therapy for non-small-cell lung cancer. Three cohorts treated with different beam arrangements were identified. One cohort (2-field boost [2FB]) received 2 parallel-opposed (anteroposterior-posteroanterior) fields per fraction initially, followed by a sequential boost delivered using 2 oblique beams. The other 2 cohorts received 3 or 4 straight fields (3FS and 4FS, respectively), ie, all fields were irradiated every day. The incidence of severe RP was plotted against MLD in each cohort, and data were analyzed using the Lyman-Kutcher-Burman (LKB) model. The incidence of grade ≥3 RP rose more steeply as a function of MLD in the 2FB cohort (N=120) than in the 4FS cohort (N=138), with an intermediate slope for the 3FS group (N=99). The estimated volume parameter from the LKB model was n=0.41 (95% confidence interval, 0.15-1.0) and led to a significant improvement in fit (P=.05) compared to a fit with volume parameter fixed at n=1 (the MLD model). Unlike the MLD model, the LKB model with n=0.41 provided a consistent description of the risk of severe RP in all three cohorts (2FB, 3FS, 4FS) simultaneously. When predicting risk of grade ≥3 RP, the mean lung dose does not adequately take into account the effects of high doses. Instead, the effective dose, computed from the LKB model using volume parameter n=0.41, may provide a better dosimetric parameter for predicting RP risk. If confirmed, these findings support the conclusion that for the same MLD, high doses to small lung volumes ("a lot to a little") are worse than low doses to large volumes ("a little to a lot"). Copyright © 2013 Elsevier Inc. All rights reserved.

  12. Defective Number Module or Impaired Access? Numerical Magnitude Processing in First Graders with Mathematical Difficulties

    ERIC Educational Resources Information Center

    De Smedt, Bert; Gilmore, Camilla K.

    2011-01-01

    This study examined numerical magnitude processing in first graders with severe and mild forms of mathematical difficulties, children with mathematics learning disabilities (MLD) and children with low achievement (LA) in mathematics, respectively. In total, 20 children with MLD, 21 children with LA, and 41 regular achievers completed a numerical…

  13. Identifying Subtypes among Children with Developmental Coordination Disorder and Mathematical Learning Disabilities, Using Model-Based Clustering

    ERIC Educational Resources Information Center

    Pieters, Stefanie; Roeyers, Herbert; Rosseel, Yves; Van Waelvelde, Hilde; Desoete, Annemie

    2015-01-01

    A relationship between motor and mathematical skills has been shown by previous research. However, the question of whether subtypes can be differentiated within developmental coordination disorder (DCD) and/or mathematical learning disability (MLD) remains unresolved. In a sample of children with and without DCD and/or MLD, a data-driven…

  14. Number Magnitude Processing and Basic Cognitive Functions in Children with Mathematical Learning Disabilities

    ERIC Educational Resources Information Center

    Andersson, Ulf; Ostergren, Rickard

    2012-01-01

    The study sought out to extend our knowledge regarding the origin of mathematical learning disabilities (MLD) in children by testing different hypotheses in the same samples of children. Different aspects of cognitive functions and number processing were assessed in fifth- and sixth-graders (11-13 years old) with MLD and compared to controls. The…

  15. Mathematical Learning Disabilities in Children with 22q11.2 Deletion Syndrome: A Review

    ERIC Educational Resources Information Center

    De Smedt, Bert; Swillen, Ann; Verschaffel, Lieven; Ghesquiere, Pol

    2009-01-01

    Mathematical learning disabilities (MLD) occur frequently in children with specific genetic disorders, like Turner syndrome, fragile X syndrome and neurofibromatosis. This review focuses on MLD in children with chromosome 22q11.2 deletion syndrome (22q11DS). This syndrome is the most common known microdeletion syndrome with a prevalence of at…

  16. Physical Fitness Differences in Children with and without Motor Learning Difficulties

    ERIC Educational Resources Information Center

    Hands, Beth; Larkin, Dawne

    2006-01-01

    Children with motor learning difficulties (MLD) tend to be less physically active than their coordinated peers and one likely consequence is a reduced level of physical fitness. In this study, 52 children with MLD, aged 5 to 8 years, were compared to 52 age- and gender-matched control children across a range of health and skill related fitness…

  17. Mathematics Learning Disability in Girls with Turner Syndrome or Fragile X Syndrome

    ERIC Educational Resources Information Center

    Murphy, Melissa M.; Mazzocco, Michele M. M.; Gerner, Gwendolyn; Henry, Anne E.

    2006-01-01

    Two studies were carried out to examine the persistence (Study 1) and characteristics (Study 2) of mathematics learning disability (MLD) in girls with Turner syndrome or fragile X during the primary school years (ages 5-9 years). In Study 1, the rate of MLD for each syndrome group exceeded the rate observed in a grade-matched comparison group,…

  18. Growth in Rapid Automatized Naming from Grades K to 8 in Children with Math or Reading Disabilities

    ERIC Educational Resources Information Center

    Mazzocco, Michèle M. M.; Grimm, Kevin J.

    2013-01-01

    Rapid automatized naming (RAN) is widely used to identify reading disabilities (RD) and has recently been considered a potential predictor of risk for mathematics learning disabilities (MLD). Here we longitudinally examine RAN performance from Grades K to 8, to view how growth on RAN response time differs for children with RD versus MLD. Across…

  19. Shear-Velocity Structure and Azimuthal and Radial Anisotropy Beneath the Kaapvaal Craton From Bayesian Inversion of Surface-Wave Data: Inferences for the Architecture and Early Evolution of Cratons

    NASA Astrophysics Data System (ADS)

    Lebedev, S.; Ravenna, M.; Adam, J.

    2017-12-01

    Seismic anisotropy provides essential information on the deformation of the lithosphere. Knowledge of anisotropy also allows us to isolate the isotropic-average seismic velocities, relatable to the lithospheric temperature and composition. We use Rayleigh and Love-wave phase velocities and their azimuthal anisotropy measured in broad period ranges across the footprint of the Southern Africa Seismic Experiment (SASE), from the Kaapvaal Craton to the Limpopo Belt. We invert the data using our recently developed, fully non-linear Markov Chain Monte Carlo method and determine, for the first time, both the isotropic-average S velocity and its radial and azimuthal anisotropy as a function of depth from the upper crust down to the asthenosphere. The probabilistic inversion provides a way to quantify non-uniqueness, using direct parameter-space sampling, and assess model uncertainties. The high-velocity anomaly indicative of the cold cratonic lithosphere bottoms at 200-250 km beneath the central and western Kaapvaal Craton, underlain by a low-velocity zone. Beneath northern Kaapvaal and Limpopo, by contrast, high velocities extend down to 300-350 km. Although this does not require a lithosphere that has maintained this thickness over a geologically long time, the data does require the mantle to be anomalously cold down to 300-350 km. Interestingly, topography correlates with the thickness of this high-velocity layer, with lower elevations where the lid is thicker. Radial shear-wave anisotropy is in the 2-5 percent range (Vsh > Vsv) from the lower crust down to 200 km, below which depth it decreases gradually. Radial variations in the amplitude of radial anisotropy show no clear relationship with those in the amplitude of azimuthal anisotropy or isotropic-average Vs anomalies. Azimuthal anisotropy changes the fast-propagation direction near the base of the lithosphere (200-300 km depth), from the laterally varying fast azimuths in the lower lithosphere to a spatially uniform, NNE-SSW azimuth in the asthenosphere, parallel to the absolute plate motion. A mid-lithospheric discontinuity in azimuthal anisotropy is detected at around 80 km depth, this depth likely to vary somewhat laterally. The orientations of anisotropy below and above the MLD prompt intriguing inferences on the early evolution of cratons.

  20. An Evolutionary Perspective on Learning Disability in Mathematics

    PubMed Central

    Geary, David C.

    2015-01-01

    A distinction between potentially evolved, or biologically-primary forms of cognition, and the culturally-specific, or biologically-secondary forms of cognition that are built from primary systems is used to explore mathematical learning disability (MLD). Using this model, MLD could result from deficits in the brain and cognitive systems that support biologically-primary mathematical competencies, or from the brain and cognitive systems that support the modification of primary systems for the creation of secondary knowledge and secondary cognitive competencies. The former include visuospatial long-term and working memory and the intraparietal sulcus, whereas the latter include the central executive component of working memory and the anterior cingulate cortex and lateral prefrontal cortex. Different forms of MLD are discussed as related to each of the cognitive and brain systems. PMID:17650991

  1. Three-dimensional volumetric analysis of irradiated lung with adjuvant breast irradiation.

    PubMed

    Teh, Amy Yuen Meei; Park, Eileen J H; Shen, Liang; Chung, Hans T

    2009-12-01

    To retrospectively evaluate the dose-volume histogram data of irradiated lung in adjuvant breast radiotherapy (ABR) using a three-dimensional computed tomography (3D-CT)-guided planning technique; and to investigate the relationship between lung dose-volume data and traditionally used two-dimensional (2D) parameters, as well as their correlation with the incidence of steroid-requiring radiation pneumonitis (SRRP). Patients beginning ABR between January 2005 and February 2006 were retrospectively reviewed. Patients included were women aged >or=18 years with ductal carcinoma in situ or Stage I-III invasive carcinoma, who received radiotherapy using a 3D-CT technique to the breast or chest wall (two-field radiotherapy [2FRT]) with or without supraclavicular irradiation (three-field radiotherapy [3FRT]), to 50 Gy in 25 fractions. A 10-Gy tumor-bed boost was allowed. Lung dose-volume histogram parameters (V(10), V(20), V(30), V(40)), 2D parameters (central lung depth [CLD], maximum lung depth [MLD], and lung length [LL]), and incidence of SRRP were reported. A total of 89 patients met the inclusion criteria: 51 had 2FRT, and 38 had 3FRT. With 2FRT, mean ipsilateral V(10), V(20), V(30), V(40) and CLD, MLD, LL were 20%, 14%, 11%, and 8% and 2.0 cm, 2.1 cm, and 14.6 cm, respectively, with strong correlation between CLD and ipsilateral V(10-V40) (R(2) = 0.73-0.83, p < 0.0005). With 3FRT, mean ipsilateral V(10), V(20), V(30), and V(40) were 30%, 22%, 17%, and 11%, but its correlation with 2D parameters was poor. With a median follow-up of 14.5 months, 1 case of SRRP was identified. With only 1 case of SRRP observed, our study is limited in its ability to provide definitive guidance, but it does provide a starting point for acceptable lung irradiation during ABR. Further prospective studies are warranted.

  2. Selective Spatial Working Memory Impairment in a Group of Children with Mathematics Learning Disabilities and Poor Problem-Solving Skills

    ERIC Educational Resources Information Center

    Passolunghi, Maria Chiara; Mammarella, Irene Cristina

    2012-01-01

    This study examines visual and spatial working memory skills in 35 third to fifth graders with both mathematics learning disabilities (MLD) and poor problem-solving skills and 35 of their peers with typical development (TD) on tasks involving both low and high attentional control. Results revealed that children with MLD, relative to TD children,…

  3. SU-F-T-687: Comparison of SPECT/CT-Based Methodologies for Estimating Lung Dose from Y-90 Radioembolization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kost, S; Yu, N; Lin, S

    2016-06-15

    Purpose: To compare mean lung dose (MLD) estimates from 99mTc macroaggregated albumin (MAA) SPECT/CT using two published methodologies for patients treated with {sup 90}Y radioembolization for liver cancer. Methods: MLD was estimated retrospectively using two methodologies for 40 patients from SPECT/CT images of 99mTc-MAA administered prior to radioembolization. In these two methods, lung shunt fractions (LSFs) were calculated as the ratio of scanned lung activity to the activity in the entire scan volume or to the sum of activity in the lung and liver respectively. Misregistration of liver activity into the lungs during SPECT acquisition was overcome by excluding lungmore » counts within either 2 or 1.5 cm of the diaphragm apex respectively. Patient lung density was assumed to be 0.3 g/cm{sup 3} or derived from CT densitovolumetry respectively. Results from both approaches were compared to MLD determined by planar scintigraphy (PS). The effect of patient size on the difference between MLD from PS and SPECT/CT was also investigated. Results: Lung density from CT densitovolumetry is not different from the reference density (p = 0.68). The second method resulted in lung dose of an average 1.5 times larger lung dose compared to the first method; however the difference between the means of the two estimates was not significant (p = 0.07). Lung dose from both methods were statistically different from those estimated from 2D PS (p < 0.001). There was no correlation between patient size and the difference between MLD from PS and both SPECT/CT methods (r < 0.22, p > 0.17). Conclusion: There is no statistically significant difference between MLD estimated from the two techniques. Both methods are statistically different from conventional PS, with PS overestimating dose by a factor of three or larger. The difference between lung doses estimated from 2D planar or 3D SPECT/CT is not dependent on patient size.« less

  4. Comparison of four software packages for CT lung volumetry in healthy individuals.

    PubMed

    Nemec, Stefan F; Molinari, Francesco; Dufresne, Valerie; Gosset, Natacha; Silva, Mario; Bankier, Alexander A

    2015-06-01

    To compare CT lung volumetry (CTLV) measurements provided by different software packages, and to provide normative data for lung densitometric measurements in healthy individuals. This retrospective study included 51 chest CTs of 17 volunteers (eight men and nine women; mean age, 30 ± 6 years), who underwent spirometrically monitored CT at total lung capacity (TLC), functional residual capacity (FRC), and mean inspiratory capacity (MIC). Volumetric differences assessed by four commercial software packages were compared with analysis of variance (ANOVA) for repeated measurements and benchmarked against the threshold for acceptable variability between spirometric measurements. Mean lung density (MLD) and parenchymal heterogeneity (MLD-SD) were also compared with ANOVA. Volumetric differences ranged from 12 to 213 ml (0.20 % to 6.45 %). Although 16/18 comparisons (among four software packages at TLC, MIC, and FRC) were statistically significant (P < 0.001 to P = 0.004), only 3/18 comparisons, one at MIC and two at FRC, exceeded the spirometry variability threshold. MLD and MLD-SD significantly increased with decreasing volumes, and were significantly larger in lower compared to upper lobes (P < 0.001). Lung volumetric differences provided by different software packages are small. These differences should not be interpreted based on statistical significance alone, but together with absolute volumetric differences. • Volumetric differences, assessed by different CTLV software, are small but statistically significant. • Volumetric differences are smaller at TLC than at MIC and FRC. • Volumetric differences rarely exceed spirometric repeatability thresholds at MIC and FRC. • Differences between CTLV measurements should be interpreted based on comparison of absolute differences. • MLD increases with decreasing volumes, and is larger in lower compared to upper lobes.

  5. Motion mitigation for lung cancer patients treated with active scanning proton therapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Grassberger, Clemens, E-mail: Grassberger.Clemens@mgh.harvard.edu; Dowdell, Stephen; Sharp, Greg

    2015-05-15

    Purpose: Motion interplay can affect the tumor dose in scanned proton beam therapy. This study assesses the ability of rescanning and gating to mitigate interplay effects during lung treatments. Methods: The treatments of five lung cancer patients [48 Gy(RBE)/4fx] with varying tumor size (21.1–82.3 cm{sup 3}) and motion amplitude (2.9–30.6 mm) were simulated employing 4D Monte Carlo. The authors investigated two spot sizes (σ ∼ 12 and ∼3 mm), three rescanning techniques (layered, volumetric, breath-sampled volumetric) and respiratory gating with a 30% duty cycle. Results: For 4/5 patients, layered rescanning 6/2 times (for the small/large spot size) maintains equivalent uniformmore » dose within the target >98% for a single fraction. Breath sampling the timing of rescanning is ∼2 times more effective than the same number of continuous rescans. Volumetric rescanning is sensitive to synchronization effects, which was observed in 3/5 patients, though not for layered rescanning. For the large spot size, rescanning compared favorably with gating in terms of time requirements, i.e., 2x-rescanning is on average a factor ∼2.6 faster than gating for this scenario. For the small spot size however, 6x-rescanning takes on average 65% longer compared to gating. Rescanning has no effect on normal lung V{sub 20} and mean lung dose (MLD), though it reduces the maximum lung dose by on average 6.9 ± 2.4/16.7 ± 12.2 Gy(RBE) for the large and small spot sizes, respectively. Gating leads to a similar reduction in maximum dose and additionally reduces V{sub 20} and MLD. Breath-sampled rescanning is most successful in reducing the maximum dose to the normal lung. Conclusions: Both rescanning (2–6 times, depending on the beam size) as well as gating was able to mitigate interplay effects in the target for 4/5 patients studied. Layered rescanning is superior to volumetric rescanning, as the latter suffers from synchronization effects in 3/5 patients studied. Gating minimizes the irradiated volume of normal lung more efficiently, while breath-sampled rescanning is superior in reducing maximum doses to organs at risk.« less

  6. Development of the Metacognitive Skills of Prediction and Evaluation in Children With or Without Math Disability

    PubMed Central

    Garrett, Adia J.; Mazzocco, Michèle M. M.; Baker, Linda

    2009-01-01

    Metacognition refers to knowledge about one’s own cognition. The present study was designed to assess metacognitive skills that either precede or follow task engagement, rather than the processes that occur during a task. Specifically, we examined prediction and evaluation skills among children with (n = 17) or without (n = 179) mathematics learning disability (MLD), from grades 2 to 4. Children were asked to predict which of several math problems they could solve correctly; later, they were asked to solve those problems. They were asked to evaluate whether their solution to each of another set of problems was correct. Children’s ability to evaluate their answers to math problems improved from grade 2 to grade 3, whereas there was no change over time in the children’s ability to predict which problems they could solve correctly. Children with MLD were less accurate than children without MLD in evaluating both their correct and incorrect solutions, and they were less accurate at predicting which problems they could solve correctly. However, children with MLD were as accurate as their peers in correctly predicting that they could not solve specific math problems. The findings have implications for the usefulness of children’s self-review during mathematics problem solving. PMID:20084181

  7. Effects of lymphatic drainage and cryotherapy on indirect markers of muscle damage.

    PubMed

    Behringer, Michael; Jedlicka, Diana; Mester, Joachim

    2018-06-01

    Muscle enzymes are cleared from the extracellular space by the lymphatic system, while smaller proteins enter the bloodstream directly. We investigated if manual lymphatic drainage (MLD), local cryotherapy (CRY), and rest (RST) differently affect the time course of creatine kinase (CK, 84 kDa) and heart-type fatty acid binding protein (h-FABP, 15 kDa) in the blood. Randomized controlled trial. After 4x20 unilateral, eccentric accentuated knee extensions (with one-third of the maximal isometric force) 30 sports students randomly received either a 30 min MLD, CRY or they rested (RST) for the same amount of time. CK, h-FABP, neutrophil granulocytes, and the perceived muscle soreness were assessed before, immediately after, and 1 hour, 4 hours, and 24 hours after the exercise. All measures increased significantly (P<0.001) after the protocol indicating that muscle damage was induced. However, the responses did not differ between the treatments. Large and small damage markers were not affected differently by MLD, CRY, or RST, when applied for 30 min and no beneficial effects on inflammation or muscle soreness could be found for MLD and CRY when compared to RST. This information is particularly important for those sports physicians and conditioning specialists who use biochemical muscle damage markers to adjust the training load and volume of athletes.

  8. Titanium dioxide thin films by atomic layer deposition: a review

    NASA Astrophysics Data System (ADS)

    Niemelä, Janne-Petteri; Marin, Giovanni; Karppinen, Maarit

    2017-09-01

    Within its rich phase diagram titanium dioxide is a truly multifunctional material with a property palette that has been shown to span from dielectric to transparent-conducting characteristics, in addition to the well-known catalytic properties. At the same time down-scaling of microelectronic devices has led to an explosive growth in research on atomic layer deposition (ALD) of a wide variety of frontier thin-film materials, among which TiO2 is one of the most popular ones. In this topical review we summarize the advances in research of ALD of titanium dioxide starting from the chemistries of the over 50 different deposition routes developed for TiO2 and the resultant structural characteristics of the films. We then continue with the doped ALD-TiO2 thin films from the perspective of dielectric, transparent-conductor and photocatalytic applications. Moreover, in order to cover the latest trends in the research field, both the variously constructed TiO2 nanostructures enabled by ALD and the Ti-based hybrid inorganic-organic films grown by the emerging ALD/MLD (combined atomic/molecular layer deposition) technique are discussed.

  9. Diffusion and ADC-map images detect ongoing demyelination on subcortical white matter in an adult metachromatic leukodystrophy patient with autoimmune Hashimoto thyroiditis

    PubMed Central

    Miura, Akiko; Kumabe, Yuri; Kimura, En; Yamashita, Satoshi; Ueda, Akihiko; Hirano, Teruyuki; Uchino, Makoto

    2010-01-01

    Adult-onset metachromatic leukodystrophy (MLD) often shows schizophrenia- or encephalopathy-like symptoms at an early stage, such as behavioural abnormalities, cognitive impairment, mood disorders and hallucinations. The authors report the case of an adult woman with MLD who had been given antipsychotic medication for schizophrenia. In the differential diagnosis, screening of auto-antibodies was important for ruling out other encephalopathies as she had a euthyroid Hashimoto thyroiditis. Diagnosis was based the results of MRI, nerve conduction velocity, sensory evoked potential, motor evoked potential, lysosomal enzyme activity and gene analysis studies. Brain MRI showed diffuse demyelination spreading from the deep white matter to subcortical area as high signals at the edges of these lesions in diffusion and apparent diffusion coefficient-map images with the U-fibres conserved. The authors diagnosed adult-onset MLD coexisting with euthyroid autoimmune Hashimoto thyroiditis. PMID:22798296

  10. Historic water-level changes and pumpage from the principal aquifers of the Memphis area, Tennessee: 1886-1975

    USGS Publications Warehouse

    Criner, James H.; Parks, William Scott

    1976-01-01

    Pumpage from the Fort Pillow Sand ("1,400-foot" sand) began in 1924 and increased at a yearly rate of about 0.6 Mgal/d (2.3 Ml/d) until 1942. From 1943 to 1962, pumpage averaged about 11.5 Mgal/d (43.5 Ml/d), then was reduced as MLGW (Memphis Light, Gas and Water Division) discontinued wells that became unserviceable. MLGW ceased pumping from the aquifer in 1974, and pumpage from the remaining industrial wells in Shelby County in 1975 was 4.4 Mgal/d (16.6 Ml/d). Water levels in the Fort Pillow Sand generally have risen since 1963. Water l evels in the aquifers in the Memphis area fluctuate inversely with changes in pumping. Analysis of observation-well and pumpage data indicates that local water levels can be altered by changing the pumping rates or by varying the areal distribution of pumping.

  11. Trellises and Trellis-Based Decoding Algorithms for Linear Block Codes. Part 3; The Map and Related Decoding Algirithms

    NASA Technical Reports Server (NTRS)

    Lin, Shu; Fossorier, Marc

    1998-01-01

    In a coded communication system with equiprobable signaling, MLD minimizes the word error probability and delivers the most likely codeword associated with the corresponding received sequence. This decoding has two drawbacks. First, minimization of the word error probability is not equivalent to minimization of the bit error probability. Therefore, MLD becomes suboptimum with respect to the bit error probability. Second, MLD delivers a hard-decision estimate of the received sequence, so that information is lost between the input and output of the ML decoder. This information is important in coded schemes where the decoded sequence is further processed, such as concatenated coding schemes, multi-stage and iterative decoding schemes. In this chapter, we first present a decoding algorithm which both minimizes bit error probability, and provides the corresponding soft information at the output of the decoder. This algorithm is referred to as the MAP (maximum aposteriori probability) decoding algorithm.

  12. Layered compression for high-precision depth data.

    PubMed

    Miao, Dan; Fu, Jingjing; Lu, Yan; Li, Shipeng; Chen, Chang Wen

    2015-12-01

    With the development of depth data acquisition technologies, access to high-precision depth with more than 8-b depths has become much easier and determining how to efficiently represent and compress high-precision depth is essential for practical depth storage and transmission systems. In this paper, we propose a layered high-precision depth compression framework based on an 8-b image/video encoder to achieve efficient compression with low complexity. Within this framework, considering the characteristics of the high-precision depth, a depth map is partitioned into two layers: 1) the most significant bits (MSBs) layer and 2) the least significant bits (LSBs) layer. The MSBs layer provides rough depth value distribution, while the LSBs layer records the details of the depth value variation. For the MSBs layer, an error-controllable pixel domain encoding scheme is proposed to exploit the data correlation of the general depth information with sharp edges and to guarantee the data format of LSBs layer is 8 b after taking the quantization error from MSBs layer. For the LSBs layer, standard 8-b image/video codec is leveraged to perform the compression. The experimental results demonstrate that the proposed coding scheme can achieve real-time depth compression with satisfactory reconstruction quality. Moreover, the compressed depth data generated from this scheme can achieve better performance in view synthesis and gesture recognition applications compared with the conventional coding schemes because of the error control algorithm.

  13. WE-AB-202-02: Incorporating Regional Ventilation Function in Predicting Radiation Fibrosis After Concurrent Chemoradiotherapy for Lung Cancer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lan, F; Jeudy, J; Tseng, H

    Purpose: To investigate the incorporation of pre-therapy regional ventilation function in predicting radiation fibrosis (RF) in stage III non-small-cell lung cancer (NSCLC) patients treated with concurrent thoracic chemoradiotherapy. Methods: 37 stage III NSCLC patients were retrospectively studied. Patients received one cycle of cisplatin-gemcitabine, followed by two to three cycles of cisplatin-etoposide concurrently with involved-field thoracic radiotherapy between 46 and 66 Gy (2 Gy per fraction). Pre-therapy regional ventilation images of the lung were derived from 4DCT via a density-change-based image registration algorithm with mass correction. RF was evaluated at 6-months post-treatment using radiographic scoring based on airway dilation and volumemore » loss. Three types of ipsilateral lung metrics were studied: (1) conventional dose-volume metrics (V20, V30, V40, and mean-lung-dose (MLD)), (2) dose-function metrics (fV20, fV30, fV40, and functional mean-lung-dose (fMLD) generated by combining regional ventilation and dose), and (3) dose-subvolume metrics (sV20, sV30, sV40, and subvolume mean-lung-dose (sMLD) defined as the dose-volume metrics computed on the sub-volume of the lung with at least 60% of the quantified maximum ventilation status). Receiver operating characteristic (ROC) curve analysis and logistic regression analysis were used to evaluate the predictability of these metrics for RF. Results: In predicting airway dilation, the area under the ROC curve (AUC) values for (V20, MLD), (fV20, fMLD), and (sV20, and sMLD) were (0.76, 0.70), (0.80, 0.74) and (0.82, 0.80), respectively. The logistic regression p-values were (0.09, 0.18), (0.02, 0.05) and (0.004, 0.006), respectively. With regard to volume loss, the corresponding AUC values for these metrics were (0.66, 0.57), (0.67, 0.61) and (0.71, 0.69), and p-values were (0.95, 0.90), (0.43, 0.64) and (0.08, 0.12), respectively. Conclusion: The inclusion of regional ventilation function improved predictability of radiation fibrosis. Dose-subvolume metrics provided a promising method for incorporating functional information into the conventional dose-volume parameters for outcome assessment.« less

  14. Effect of Fill Temperature on Clostridium botulinum Type A Toxin Activity during the Hot Filling of Juice Bottles.

    PubMed

    Skinner, Guy E; Fleischman, Gregory J; Balster, Fran; Reineke, Karl; Reddy, N Rukma; Larkin, John W

    2015-08-01

    The potential threat of terrorist attacks against the United States food supply using neurotoxin produced by Clostridium botulinum (BoNT) has resulted in the need for studying the effect of various food process operations on the bioavailability of this toxin. The objective of this study was to evaluate C. botulinum type A neurotoxin bioavailability after a simulated hot fill juice bottling operation. C. botulinum type A acid mud toxin (∼10(6) mouse lethal dose [MLD50]/ml) was deposited into juice bottles at an experimentally determined fastest cooling spot. Bottles (12 or 20 oz [355 and 592 ml]) were filled with either apple juice or an orange drink, at 80 or 85°C, in either upright or inverted orientations. Toxicity of the juice was evaluated as a function of holding time (1 to 2 min) by the mouse bioassay. The fastest cooling point in the upright orientation was determined to be at a bottle's bottom rim. In the inverted orientation, the fastest cooling point was in the bottle cap region. With respect to these two points, the upright bottle cooled faster than the inverted bottle, which was reflected in a higher inactivation of BoNT in the latter. For the orange drink (pH 2.9) toxicity was reduced by 0.5 × 10(6) MLD50/ml to a nondetectable level after 1 min in all bottle sizes, orientations, and temperatures as measured by the mouse bioassay. This indicates that there was at least a 0.5 × 10(6) MLD50/ml reduction in activity. Inactivation in apple juice (pH 4.0), to the same degree as in the orange drink, was found only for the inverted orientation at 85°C. Complete inactivation in apple juice for all conditions was found at a lower added toxin level of 0.25 × 10(5) MLD50/ml. In general, bottle inversion and filling at 85°C provided complete inactivation of BoNT to the 0.5 × 10(6) MLD50/ml level. All experiments resulted in the inactivation of 2.5 × 10(4) MLD50/ml of BoNT regardless of juice type, fill temperature, or bottle orientation and size.

  15. Lithospheric structure beneath the central and western North China Craton and adjacent regions from S-receiver function imaging

    NASA Astrophysics Data System (ADS)

    Yinshuang, A.; Zhang, Y.; Chen, L.

    2016-12-01

    The central and western NCC(CWNCC) only experienced localized lithospheric modification and has remained relatively stable since the Pre-Cambrian in contrast to the fundamental destruction in the east. For better unraveling the tectonic evolution and dynamics of CWNCC, detailed knowledge of lithospheric structure is thus important. However, most of the available seismological observations are dominated by regional seismic tomography and the resolutions are rather low due to the limited data coverage or intrinsic limitation of the methods. S receiver function(RF) contains information from deep velocity discontinuities and is free from the interference of crustal multiples, so it is widely used in subcontinental lithospheric structural studies. We collected teleseismic data from 340 broadband stations in CWNCC, and adopted 2-D wave equation-based poststack migration method to do S-receiver function CCP imaging. Finally, we get 8 migrated profile images in CWNCC and adjacent areas and integrate them for an overview. The most prominent feature of the LAB beneath central NCC is an sudden subsidence to 160km in the southern portion, and the dimension and extension of this deep anomaly is correlated to the lithosphere in Ordos, so we interpret it as a remnant cratonic mantle root. The LAB beneath western NCC can extend to the depth of 150-180 km but appears laterally variable. Western Ordos becomes shallower than its eastern counterpart and there are two obvious deep anomalies beneath the eastern Ordos, divided by a geological boundary at 37°N, which reflects that the lithosphere of Ordos is not so homogeneous or rigid as people thought before. Furthermore, a negative velocity discontinuity is widely identified at the depth of 80- 110 km within the thick lithosphere of CWNCC, and the location is spatially coincide with the modified LAB in ENCC. Although the cause of this mid-lithospheric discontinuity(MLD) is still controversial, mechanically, it may indicate an ancient, weak layer within the overall strong cratonic lithosphere. Our result is broadly consistent with the previous tomography studies, but shows more detailed information of lithospheric variations,. Moreover, it corroborates the existence of the similar discontinuities at 100 km depth under stable continental regions worldwide.

  16. Acute Toxicity and Efficacy of Current Medical Countermeasures against VM in Guinea Pigs: A Comparison to VX and VR

    DTIC Science & Technology

    2013-05-01

    and diazepam with and without pretreatment with pyridostigmine bromide . The 24 hr median lethal dose (MLD) of VM was determined using a sequential... pyridostigmine bromide . The 24 hr median lethal dose (MLD) of VM was determined using a sequential stage approach. The efficacy of medical...with and without pyridostigmine bromide (PB) pretreatment against lethal intoxication with VM, VR or VX. Methods Animals: Adult male Hartley

  17. Gastrointestinal blood loss induced by three different non-steroidal anti-inflammatory drugs.

    PubMed

    Bidlingmaier, A; Hammermaier, A; Nagyiványi, P; Pabst, G; Waitzinger, J

    1995-04-01

    A clinical study was performed on 18 healthy volunteers to compare the gastrointestinal daily blood loss induced by oral intake of three different non-steroidal anti-inflammatory drugs, lysine clonixinate (CAS 55837-30-4), ibuprofen (CAS 15687-27-1) and acetylsalicylic acid (CAS 50-78-2 ASA). For quantitative determination of gastrointestinal blood loss, autologous erythrocytes were radiolabelled in vitro with 51Cr and reinfused at study start. The amount of radioactivity excreted in faeces was measured during a placebo baseline phase of three days, a treatment phase of five days with thrice daily dosing of ASA, ibuprofen or lysine clonixinate and a subsequent wash-out phase of five days. The highest increase of mean daily blood loss over baseline was observed after treatment with ASA (+ 1.66 ml/d versus baseline). Treatment with ibuprofen led to an increase of mean daily blood loss by + 0.52 ml/d. During treatment with lysine clonixinate the mean increase of daily blood loss was +0.32 ml/d versus baseline. In the ibuprofen and lysine clonixinate treatment groups the values of mean daily blood loss decreased during the wash-out phase with respect to the verum phase, whereas the mean daily blood loss during the wash-out phase after treatment with ASA even increased in comparison to the verum phase (mean daily blood loss: +2.07 ml/d versus baseline.

  18. Enzymatic characterization of novel arylsulfatase A variants using human arylsulfatase A-deficient immortalized mesenchymal stromal cells.

    PubMed

    Böhringer, Judith; Santer, René; Schumacher, Neele; Gieseke, Friederike; Cornils, Kerstin; Pechan, Maria; Kustermann-Kuhn, Birgit; Handgretinger, Rupert; Schöls, Ludger; Harzer, Klaus; Krägeloh-Mann, Ingeborg; Müller, Ingo

    2017-11-01

    Metachromatic leukodystrophy (MLD) is an autosomal-recessive lysosomal storage disease caused by mutations in the ARSA gene leading to arylsulfatase A (ARSA) deficiency and causing sulfatide accumulation. Main symptoms of the disease are progressive demyelination, neurological dysfunction, and reduced life expectancy. To date, more than 200 different ARSA variants have been reported in MLD patients. Here, we report the biochemical characterization of seven novel pathogenic variants (c.98T > C, c.195delC, c.229G > C, c.545C > G, c.674A > G, c.852T > A, and c.1274A > G), which were found when sequencing a cohort of 31 German MLD families. For that purpose, the ARSA cDNAs carrying the respective mutations inserted by site-directed mutagenesis were cloned into a MigR1 (MSCV, IRES, GFP, retrovirus-1) vector. The constructs were overexpressed using retroviral gene transfer in immortalized, human multipotent mesenchymal stromal cells prepared from a patient deficient in ARSA activity (late infantile MLD). In this novel ARSA -/- cell system, the seven ARSA mutants showed ARSA activity of less than 10% when compared with wild type, which is evidence for the pathogenicity of all seven variants. In conclusion, the system of ARSA -/- -immortalized MSC turned out to be a helpful novel tool for the biochemical characterization of ARSA variants. © 2017 Wiley Periodicals, Inc.

  19. Ergonovine-induced changes of coronary artery diameter in patients with nonsignificant coronary artery stenosis : relation with lipid profile.

    PubMed

    Nedeljkovic, Milan A; Ostojic, Miodrag C; Beleslin, Branko D; Nedeljkovic, Ivana; Milic, Natasa; Vukcevic, Vladan; Stojkovic, Sinisa; Saponjski, Jovica; Orlic, Dejan; Djordjevic-Dikic, Ana; Stepanovic, Jelena; Giga, Vojislav; Petrasinovic, Zorica; Arandjelovic, Aleksandra; Beleslin, Biljana; Kanjuh, Vladimir

    2007-06-01

    Serum cholesterol is positively associated with the risk of developing coronary heart disease. The aim of this study was to determine the relation between response of coronary arteries to ergonovine provocation and lipid profile in patients with nonsignificant coronary artery disease. 105 patients (46 male, 59 female, mean age 52 +/- 8 years) with chest pain syndrome and nonsignificant coronary artery stenosis (< 50% diameter stenosis) were analyzed. Ergonovine test was performed at the end of diagnostic catheterization. Coronary spasm was defined as total or near total obstruction of the coronary artery. By quantitative coronary arteriography, changes of minimal luminal diameter (MLD) during ergonovine provocation were evaluated. Total cholesterol, LDL and HDL cholesterol, and triglycerides were measured. There was a significant negative correlation between resting MLD and LDL cholesterol (r = -0.215; p = 0.034), and a significant positive correlation between MLD decrease provoked by ergonovine and total cholesterol (r = 0.275; p = 0.006), as well as LDL cholesterol (r = 0.284; p = 0.004), but not for HDL cholesterol and triglycerides (p = NS [not significant]). In patients with nonsignificant coronary artery stenosis evaluated by ergonovine provocation, there was not only a significant negative correlation between MLD and LDL cholesterol, but also a positive correlation between coronary vasoconstriction induced by ergonovine provocation and both total and LDL cholesterol.

  20. Method of predicting the mean lung dose based on a patient's anatomy and dose-volume histograms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zawadzka, Anna, E-mail: a.zawadzka@zfm.coi.pl; Nesteruk, Marta; Department of Radiation Oncology, University Hospital Zurich and University of Zurich, Zurich

    The aim of this study was to propose a method to predict the minimum achievable mean lung dose (MLD) and corresponding dosimetric parameters for organs-at-risk (OAR) based on individual patient anatomy. For each patient, the dose for 36 equidistant individual multileaf collimator shaped fields in the treatment planning system (TPS) was calculated. Based on these dose matrices, the MLD for each patient was predicted by the homemade DosePredictor software in which the solution of linear equations was implemented. The software prediction results were validated based on 3D conformal radiotherapy (3D-CRT) and volumetric modulated arc therapy (VMAT) plans previously prepared formore » 16 patients with stage III non–small-cell lung cancer (NSCLC). For each patient, dosimetric parameters derived from plans and the results calculated by DosePredictor were compared. The MLD, the maximum dose to the spinal cord (D{sub max} {sub cord}) and the mean esophageal dose (MED) were analyzed. There was a strong correlation between the MLD calculated by the DosePredictor and those obtained in treatment plans regardless of the technique used. The correlation coefficient was 0.96 for both 3D-CRT and VMAT techniques. In a similar manner, MED correlations of 0.98 and 0.96 were obtained for 3D-CRT and VMAT plans, respectively. The maximum dose to the spinal cord was not predicted very well. The correlation coefficient was 0.30 and 0.61 for 3D-CRT and VMAT, respectively. The presented method allows us to predict the minimum MLD and corresponding dosimetric parameters to OARs without the necessity of plan preparation. The method can serve as a guide during the treatment planning process, for example, as initial constraints in VMAT optimization. It allows the probability of lung pneumonitis to be predicted.« less

  1. Calculation of Cumulative Distributions and Detection Probabilities in Communications and Optics.

    DTIC Science & Technology

    1986-03-31

    result, Figure 3.1 shows the additional SNR required (often called the CFAR loss) for the MLD, CMLD , and OSD in a multiple target environment to...Notice that although the CFAR loss increases with INR for the MLD, the CMLD and OSD have a bounded loss as the INR + w. These results have been more...false-alarm rate ( CFAR ) when the background noise level is unknown. In Section 2 we described the application of saddlepoint integration techniques to

  2. Data-driven heterogeneity in mathematical learning disabilities based on the triple code model.

    PubMed

    Peake, Christian; Jiménez, Juan E; Rodríguez, Cristina

    2017-12-01

    Many classifications of heterogeneity in mathematical learning disabilities (MLD) have been proposed over the past four decades, however no empirical research has been conducted until recently, and none of the classifications are derived from Triple Code Model (TCM) postulates. The TCM proposes MLD as a heterogeneous disorder, with two distinguishable profiles: a representational subtype and a verbal subtype. A sample of elementary school 3rd to 6th graders was divided into two age cohorts (3rd - 4th grades, and 5th - 6th grades). Using data-driven strategies, based on the cognitive classification variables predicted by the TCM, our sample of children with MLD clustered as expected: a group with representational deficits and a group with number-fact retrieval deficits. In the younger group, a spatial subtype also emerged, while in both cohorts a non-specific cluster was produced whose profile could not be explained by this theoretical approach. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Master Logic Diagram: An Approach to Identify Initiating Events of HTGRs

    NASA Astrophysics Data System (ADS)

    Purba, J. H.

    2018-02-01

    Initiating events of a nuclear power plant being evaluated need to be firstly identified prior to applying probabilistic safety assessment on that plant. Various types of master logic diagrams (MLDs) have been proposedforsearching initiating events of the next generation of nuclear power plants, which have limited data and operating experiences. Those MLDs are different in the number of steps or levels and different in the basis for developing them. This study proposed another type of MLD approach to find high temperature gas cooled reactor (HTGR) initiating events. It consists of five functional steps starting from the top event representing the final objective of the safety functions to the basic event representing the goal of the MLD development, which is an initiating event. The application of the proposed approach to search for two HTGR initiating events, i.e. power turbine generator trip and loss of offsite power, is provided. The results confirmed that the proposed MLD is feasiblefor finding HTGR initiating events.

  4. The development of product parity sensitivity in children with mathematics learning disability and in typical achievers.

    PubMed

    Rotem, Avital; Henik, Avishai

    2013-02-01

    Parity helps us determine whether an arithmetic equation is true or false. The current research examines the development of sensitivity to parity cues in multiplication in typically achieving (TA) children (grades 2, 3, 4 and 6) and in children with mathematics learning disabilities (MLD, grades 6 and 8), via a verification task. In TA children the onset of parity sensitivity was observed at the beginning of 3rd grade, whereas in children with MLD it was documented only in 8th grade. These results suggest that children with MLD develop parity aspects of number sense, though later than TA children. To check the plausibility of equations, children used mainly the multiplication parity rule rather than familiarity with even products. Similar to observations in adults, parity sensitivity was largest for problems with two even operands, moderate for problems with one even and one odd operand, and smallest for problems with two odd operands. Copyright © 2012 Elsevier Ltd. All rights reserved.

  5. Development of Number Line Representations in Children With Mathematical Learning Disability

    PubMed Central

    Geary, David C.; Hoard, Mary K.; Nugent, Lara; Byrd-Craven, Jennifer

    2015-01-01

    Children with a mathematical learning disability (MLD, n = 19) and low achieving (LA, n = 43) children were identified using mathematics achievement scores below the 11th percentile and between the 11th and 25th percentiles, respectively. A control group of typically achieving (TA, n = 50) children was also identified. Number line and speed of processing tasks were administered in 1st and 2nd grade and a working memory battery in 1st grade. In both grades, the MLD children were less accurate in their number line placements and more reliant on a natural number-magnitude representational system to make these placements than were TA children. The TA children were more reliant on the school-taught linear system in both grades. The performance of the LA children was similar to that of the MLD children in first grade and to the TA children in second. The central executive component of working memory contributed to across-grade improvements in number line performance and to group differences in this performance. PMID:18473200

  6. Clinical verification of a theory for predicting side branch stenosis after main vessel stenting in coronary bifurcation lesions.

    PubMed

    Vassilev, Dobrin; Gil, Robert

    2008-12-01

    To verify in a clinical scenario a theory for predicting side branch (SB) stenosis after main vessel stent implantation in coronary bifurcation lesions. Many unresolved issues remain regarding SB compromise when the parent vessel is stented. Bifurcation lesions (all Medina types) were subjected to angiographic analysis to determine the angle, defined as alpha, between the axes of the parent vessel and the SB. Using the prediction that the percent diameter stenosis (%DS) is equal to the cosine of angle alpha and relating it to a formula to determine the minimal lumen diameter (MLD) led to the following equation: MLD = ds x (1 -cos alpha); ds refers to the diameter of the SB. The predicted and observed SB stenosis values following angiography were compared. Fifty-two patients with 57 lesions were included in the analysis. Patient demographics and characteristics were similar to those in previous studies. There was a high coefficient of determination between the predicted and observed values of %DS (r(2)= 0.82, P < 0.001) and MLD (r(2)= 0.86, P < 0.001). We determined a cutoff value of 70% for predicted %DS for SB closure. When using multivariate regression analysis, the only predictor of SB ostial stenosis after stenting was alpha angle, whereas the predictors of MLD included the angle alpha and the RVD of the SB. Our analysis shows that the most powerful independent predictor of SB compromise is a new variable angle alpha.

  7. Return-to-play outcomes after microscopic lumbar diskectomy in professional athletes.

    PubMed

    Watkins, Robert G; Hanna, Robert; Chang, David; Watkins, Robert G

    2012-11-01

    It has been shown a microscopic lumbar diskectomy (MLD) is effective in getting professional athletes back to their sport after a herniated nucleus pulposus (HNP). There is a need for more information on the time it takes professional athletes to return after surgery. To determine average time for return to play and success in returning to play for professional athletes undergoing MLD. Case series; Level of evidence, 4. Between 1996 and 2010, the senior authors treated 171 professional athletes for lumbar HNP. A retrospective review was performed using patient charts, operative reports, team medical records, and internet search. Eighty-five patients were treated with MLD, and 86 patients were treated nonoperatively. This study focused on the return to play of the operatively treated patients. Primary outcome measures were return rate and average return time, considering only patients whose sport is in season at specific postoperative time points. Of surgically treated patients, 89.3% returned to sport. The average time it took operative patients to return to their sport (return time) was 5.8 months. Progressive return data for surgically treated patients showed the percentage of athletes who returned increased from 50% at 3 months to 72% at 6 months to 77% at 9 months and 84% at 12 months. The chance a player returns to play after MLD is 50% at 3 months, 72% at 6 months, 77% at 9 months, and 84% at 12 months. The overall chance of returning to play at any point is 89%.

  8. The protective effect of habitual tea consumption on hypertension.

    PubMed

    Yang, Yi-Ching; Lu, Feng-Hwa; Wu, Jin-Shang; Wu, Chih-Hsing; Chang, Chih-Jen

    2004-07-26

    Tea has long been believed to possess hypotensive effects in popular Chinese medicine. However, conflicting results have been shown among human trials and animal studies on the relation between tea consumption and blood pressure. Epidemiological evidence about the long-term effect of tea on hypertensive risk is also inconsistent. We examined the effect of tea drinking, measured in detail for the past decades, on the risk of newly diagnosed hypertension in 1507 subjects (711 men and 796 women), 20 years or older, who did not have a hypertensive history during 1996 in Taiwan. Six hundred subjects (39.8%) were habitual tea drinkers, defined by tea consumption of 120 mL/d or more for at least 1 year. Compared with nonhabitual tea drinkers, the risk of developing hypertension decreased by 46% for those who drank 120 to 599 mL/d and was further reduced by 65% for those who drank 600 mL/d or more after carefully adjusting for age, sex, socioeconomic status, family history of hypertension, body mass index, waist-hip ratio, lifestyle factors (total physical activity, high sodium intake, cigarette smoking, alcohol consumption, and coffee drinking), and dietary factors (vegetable, fruit, unrefined grain, fish, milk, visible-fat food, and deep fried food intake). However, tea consumption for more than 1 year was not associated with a further reduction of hypertension risk. Habitual moderate strength green or oolong tea consumption, 120 mL/d or more for 1 year, significantly reduces the risk of developing hypertension in the Chinese population.

  9. Fan-shaped complete block on helical tomotherapy for esophageal cancer: a phantom study.

    PubMed

    Chang, Chiu-Han; Mok, Greta S P; Shueng, Pei-Wei; Yeh, Hsin-Pei; Shiau, An-Cheng; Tien, Hui-Ju; Lin, Chi-Ta; Wu, Tung-Hsin

    2015-01-01

    Radiation pneumonitis (RP) is a common complication for radiotherapy of esophageal cancer and is associated with the low dose irradiated lung volume. This study aims to reduce the mean lung dose (MLD) and the relative lung volume at 20 Gy (V 20) and at low dose region using various designs of the fan-shaped complete block (FSCB) in helical tomotherapy. Hypothetical esophageal tumor was delineated on an anthropomorphic phantom. The FSCB was defined as the fan-shaped radiation restricted area located in both lungs. Seven treatment plans were performed with nonblock design and FSCB with different fan angles, that is, from 90° to 140°, with increment of 10°. The homogeneous index, conformation number, MLD, and the relative lung volume receiving more than 5, 10, 15, and 20 Gy (V 5, V 10, V 15, and V 20) were determined for each treatment scheme. There was a substantial reduction in the MLD, V 5, V 10, V 15, and V 20 when using different types of FSCB as compared to the nonblock design. The reduction of V 20, V 15, V 10, and V 5 was 6.3%-8.6%, 16%-23%, 42%-57%, and 42%-66% for FSCB 90°-140°, respectively. The use of FSCB in helical tomotherapy is a promising method to reduce the MLD, V 20, and relative lung volume in low dose region, especially in V 5 and V 10 for esophageal cancer.

  10. Artificially-built solid electrolyte interphase via surface-bonded vinylene carbonate derivative on graphite by molecular layer deposition

    NASA Astrophysics Data System (ADS)

    Chae, Seulki; Lee, Jeong Beom; Lee, Jae Gil; Lee, Tae-jin; Soon, Jiyong; Ryu, Ji Heon; Lee, Jin Seok; Oh, Seung M.

    2017-12-01

    Vinylene carbonate (VC) is attached in a ring-opened form on a graphite surface by molecular layer deposition (MLD) method, and its role as a solid electrolyte interphase (SEI) former is studied. When VC is added into the electrolyte solution of a graphite/LiNi0.5Mn1.5O4 (LNMO) full-cell, it is reductively decomposed to form an effective SEI on the graphite electrode. However, VC in the electrolyte solution has serious adverse effects due to its poor stability against electrochemical oxidation on the LNMO positive electrode. A excessive acid generation as a result of VC oxidation is observed, causing metal dissolution from the LNMO electrode. The dissolved metal ions are plated on the graphite electrode to destroy the SEI layer, eventually causing serious capacity fading and poor Coulombic efficiency. The VC derivative on the graphite surface also forms an effective SEI layer on the graphite negative electrode via reductive decomposition. The detrimental effects on the LNMO positive electrode, however, can be avoided because the bonded VC derivative on the graphite surface cannot move to the LNMO electrode. Consequently, the graphite/LNMO full-cell fabricated with the VC-attached graphite outperforms the cells without VC or with VC in the electrolyte, in terms of Coulombic efficiency and capacity retention.

  11. Effects of a specific blend of essential oils on apparent nutrient digestion, rumen fermentation and rumen microbial populations in sheep fed a 50:50 alfalfa hay:concentrate diet

    PubMed Central

    Khateri, N.; Azizi, O.; Jahani-Azizabadi, H.

    2017-01-01

    Objective An experiment was conducted to investigate the effects of a specific mixture of essential oils (MEO), containing thyme, clove and cinnamon EO, on rumen microbial fermentation, nutrient apparent digestibility and blood metabolites in fistulated sheep. Methods Six sheep fitted with ruminal fistulas were used in a repeated measurement design with two 24-d periods to investigate the effect of adding MEO at 0 (control), 0.8, and 1.6 mL/d on apparent nutrient digestibility, rumen fermentation characteristics, rumen microbial population and blood chemical metabolites. Animals were fed with a 50:50 alfalfa hay:concentrate diet. Results Ruminal pH, total volatile fatty acids (VFA) concentration, molar proportion of individual VFA, acetate: propionate ratio and methane production were not affected with MEO. Relative to the control, Small peptides plus amino acid nitrogen and large peptides nitrogen concentration in rumen fluid were not affected with MEO supplementation; while, rumen fluid ammonia nitrogen concentration at 0 and 6 h after morning feeding in sheep fed with 1.6 mL/d of MEO was lower (p<0.05) compared to the control and 0.8 mL/d of MEO. At 0 h after morning feeding, ammonia nitrogen concentration was higher (p<0.05) in sheep fed 0.8 mL/d of MEO relative to 1.6 mL/d and control diet. Ruminal protozoa and hyper ammonia producing (HAP) bacteria counts were not affected by addition of MEO in the diet. Relative to the control, no changes were observed in the red and white blood cells, hemoglobin, hematocrit, glucose, beta-hydroxybutyric acid, cholesterol, total protein, albumin, blood urea nitrogen and aspartate aminotransferase and alanine aminotransferase concentration. Apparent total tract digestibility of dry matter, crude proten, organic matter, and neutral detergent fiber were not influenced by MEO supplementation. Conclusion The results of the present study suggested that supplementation of MEO may have limited effects on apparent nutrient digestibility, ruminal fermentation and protozoa and HAP bacteria count, blood cells and metabolites. PMID:28249376

  12. Combined Ventilation and Perfusion Imaging Correlates With the Dosimetric Parameters of Radiation Pneumonitis in Radiation Therapy Planning for Lung Cancer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kimura, Tomoki, E-mail: tkkimura@hiroshima-u.ac.jp; Doi, Yoshiko; Nakashima, Takeo

    2015-11-15

    Purpose: The purpose of this study was to prospectively investigate clinical correlations between dosimetric parameters associated with radiation pneumonitis (RP) and functional lung imaging. Methods and Materials: Functional lung imaging was performed using four-dimensional computed tomography (4D-CT) for ventilation imaging, single-photon emission computed tomography (SPECT) for perfusion imaging, or both (V/Q-matched region). Using 4D-CT, ventilation imaging was derived from a low attenuation area according to CT numbers below different thresholds (vent-860 and -910). Perfusion imaging at the 10th, 30th, 50th, and 70th percentile perfusion levels (F10-F70) were defined as the top 10%, 30%, 50%, and 70% hyperperfused normal lung, respectively.more » All imaging data were incorporated into a 3D planning system to evaluate correlations between RP dosimetric parameters (where fV20 is the percentage of functional lung volume irradiated with >20 Gy, or fMLD, the mean dose administered to functional lung) and the percentage of functional lung volume. Radiation pneumonitis was evaluated using Common Terminology Criteria for Adverse Events version 4.0. Statistical significance was defined as a P value of <.05. Results: Sixty patients who underwent curative radiation therapy were enrolled (48 patients for non-small cell lung cancer, and 12 patients for small cell lung cancer). Grades 1, 2, and ≥3 RP were observed in 16, 44, and 6 patients, respectively. Significant correlations were observed between the percentage of functional lung volume and fV20 (r=0.4475 in vent-860 and 0.3508 in F30) or fMLD (r=0.4701 in vent-860 and 0.3128 in F30) in patients with grade ≥2 RP. F30∩vent-860 results exhibited stronger correlations with fV20 and fMLD in patients with grade ≥2 (r=0.5509 in fV20 and 0.5320 in fMLD) and grade ≥3 RP (r=0.8770 in fV20 and 0.8518 in fMLD). Conclusions: RP dosimetric parameters correlated significantly with functional lung imaging.« less

  13. Structural basis for ribosome protein S1 interaction with RNA in trans-translation of Mycobacterium tuberculosis.

    PubMed

    Fan, Yi; Dai, Yazhuang; Hou, Meijing; Wang, Huilin; Yao, Hongwei; Guo, Chenyun; Lin, Donghai; Liao, Xinli

    2017-05-27

    Ribosomal protein S1 (RpsA), the largest 30S protein in ribosome, plays a significant role in translation and trans-translation. In Mycobacterium tuberculosis, the C-terminus of RpsA is known as tuberculosis drug target of pyrazinoic acid, which inhibits the interaction between MtRpsA and tmRNA in trans-translation. However, the molecular mechanism underlying the interaction of MtRpsA with tmRNA remains unknown. We herein analyzed the interaction of the C-terminal domain of MtRpsA with three RNA fragments poly(A), sMLD and pre-sMLD. NMR titration analysis revealed that the RNA binding sites on MtRpsA CTD are mainly located in the β2, β3 and β5 strands and the adjacent L3 loop of the S1 domain. Fluorescence experiments determined the MtRpsA CTD binding to RNAs are in the micromolar affinity range. Sequence analysis also revealed conserved residues in the mapped RNA binding region. Residues L304, V305, G308, F310, H322, I323, R357 and I358 were verified to be the key residues influencing the interaction between MtRpsA CTD and pre-sMLD. Molecular docking further confirmed that the poly(A)-like sequence and sMLD of tmRNA are all involved in the protein-RNA interaction, through charged interaction and hydrogen bonds. The results will be beneficial for designing new anti-tuberculosis drugs. Copyright © 2017 Elsevier Inc. All rights reserved.

  14. [Differential diagnosis of primary and secondary mathematical learning disability – indications from the dyscalculia test Basis-Math 4–8].

    PubMed

    Krinzinger, Helga

    2016-09-01

    Studies in children with AD(H)D without mathematical learning disability (MLD) as well as studies on the effects of methylphenidate on arithmetic have shown that most deficits in mathematics and most error types commonly described as specific to developmental dyscalculia (e. g., finger-counting, fact-retrieval deficit, complex counting, difficulties with carry/borrow procedures, self-corrections) cannot be classified as such and should thus not be used for the differential diagnosis of primary dyscalculia and secondary MLD. This article proposes using the overall score in the dyscalculia test Basis-Math 4-8 (Moser Opitz et al., 2010) as well as implausible subtraction errors as a marker for dyscalculia and the number of self-corrections made during the test as a cognitive marker for attention deficits. Hierarchical cluster analyses were calculated in a sample of 51 clinically referred children with normal IQ and suspicion of MLD, using IQ, years of schooling, overall score of the Basis-Math 4–8 and number of self-corrections in this test as variables. The results revealed a subgroup with primary dyscalculia as well as three subgroups with secondary MLD (two with attention deficit hyperactivity disorder, one with depression and one small subgroup with high IQ). In conclusion, the Basis-Math 4–8 (Moser Opitz et al., 2010) can offer substantial information for the differential diagnosis of dyscalculia and secondary deficits in mathematics due to attention problems and enable optimization of treatment decisions for the different groups.

  15. Evaluating mice lacking serum carboxylesterase as a behavioral model for nerve agent intoxication.

    PubMed

    Dunn, Emily N; Ferrara-Bowens, Teresa M; Chachich, Mark E; Honnold, Cary L; Rothwell, Cristin C; Hoard-Fruchey, Heidi M; Lesyna, Catherine A; Johnson, Erik A; Cerasoli, Douglas M; McDonough, John H; Cadieux, C Linn

    2018-06-07

    Mice and other rodents are typically utilized for chemical warfare nerve agent research. Rodents have large amounts of carboxylesterase in their blood, while humans do not. Carboxylesterase nonspecifically binds to and detoxifies nerve agent. The presence of this natural bioscavenger makes mice and other rodents poor models for studies identifying therapeutics to treat humans exposed to nerve agents. To obviate this problem, a serum carboxylesterase knockout (Es1 KO) mouse was created. In this study, Es1 KO and wild type (WT) mice were assessed for differences in gene expression, nerve agent (soman; GD) median lethal dose (MLD) values, and behavior prior to and following nerve agent exposure. No expression differences were detected between Es1 KO and WT mice in more than 34 000 mouse genes tested. There was a significant difference between Es1 KO and WT mice in MLD values, as the MLD for GD-exposed WT mice was significantly higher than the MLD for GD-exposed Es1 KO mice. Behavioral assessments of Es1 KO and WT mice included an open field test, a zero maze, a Barnes maze, and a sucrose preference test (SPT). While sex differences were observed in various measures of these tests, overall, Es1 KO mice behaved similarly to WT mice. The two genotypes also showed virtually identical neuropathological changes following GD exposure. Es1 KO mice appear to have an enhanced susceptibility to GD toxicity while retaining all other behavioral and physiological responses to this nerve agent, making the Es1 KO mouse a more human-like model for nerve agent research.

  16. Consequences of Early Conductive Hearing Loss on Long-Term Binaural Processing.

    PubMed

    Graydon, Kelley; Rance, Gary; Dowell, Richard; Van Dun, Bram

    The aim of the study was to investigate the long-term effects of early conductive hearing loss on binaural processing in school-age children. One hundred and eighteen children participated in the study, 82 children with a documented history of conductive hearing loss associated with otitis media and 36 controls who had documented histories showing no evidence of otitis media or conductive hearing loss. All children were demonstrated to have normal-hearing acuity and middle ear function at the time of assessment. The Listening in Spatialized Noise Sentence (LiSN-S) task and the masking level difference (MLD) task were used as the two different measures of binaural interaction ability. Children with a history of conductive hearing loss performed significantly poorer than controls on all LiSN-S conditions relying on binaural cues (DV90, p = <0.001 and SV90, p = 0.003). No significant difference was found between the groups in listening conditions without binaural cues. Fifteen children with a conductive hearing loss history (18%) showed results consistent with a spatial processing disorder. No significant difference was observed between the conductive hearing loss group and the controls on the MLD task. Furthermore, no correlations were found between LiSN-S and MLD. Results show a relationship between early conductive hearing loss and listening deficits that persist once hearing has returned to normal. Results also suggest that the two binaural interaction tasks (LiSN-S and MLD) may be measuring binaural processing at different levels. Findings highlight the need for a screening measure of functional listening ability in children with a history of early otitis media.

  17. The anatomy of the musculocutaneous latissimus dorsi flap for neophalloplasty.

    PubMed

    Dennis, M; Granger, A; Ortiz, A; Terrell, M; Loukos, M; Schober, J

    2018-03-01

    In transgender surgery, the ideal neophallus is one that: (a) is constructed using a reproducible procedure, (b) possesses tactile and erogenous sensation, (c) is large and rigid enough (naturally, or using a prosthesis) to permit penetrative intercourse, (d) leaves acceptable donor site morbidity, (e) results in esthetically satisfactory appearance, and (f) allows for voiding while standing. The musculocutaneous latissimus dorsi (MLD) flap has favorable results in the area of neophalloplasty. Among its advantages are acceptable donor site appearance, stiffness sufficient for intercourse, and esthetically satisfactory genital appearance. The anatomy of the MLD flap supports the creation of a neophallus for transsexual anatomy revision. Herein, we give an overview of the advantages and disadvantages of the procedure, and the anatomical details and surgical steps involved. Novel illustrations were created from standard surgical text descriptions to clarify this topic for surgical training and patient understanding and decision making. A review of the relevant literature regarding the anatomy, procedure development, and outcomes is presented. The MLD flap uses part of the latissimus dorsi muscle with branches of the thoracodorsal vessels and nerve to construct a neophallus. A thin strip of muscle around the pedicle is harvested, resulting in a slightly curvilinear scar. The blood supply is connected to the femoral artery and saphenous vein or the deep inferior epigastric artery and vein, while the nerve is connected to the ilioinguinal nerve or the obturator nerve. The MLD flap for neophalloplasty is a reliable graft with a well concealed scar and low donor site morbidity. Clin. Anat. 31:152-159, 2018. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  18. Nanopatterning of Group V Elements for Tailoring the Electronic Properties of Semiconductors by Monolayer Doping.

    PubMed

    Thissen, Peter; Cho, Kyeongjae; Longo, Roberto C

    2017-01-18

    Control of the electronic properties of semiconductors is primarily achieved through doping. While scaling down the device dimensions to the molecular regime presents an increasing number of difficulties, doping control at the nanoscale is still regarded as one of the major challenges of the electronic industry. Within this context, new techniques such as monolayer doping (MLD) represent a substantial improvement toward surface doping with atomic and specific doping dose control at the nanoscale. Our previous work has explained in detail the atomistic mechanism behind MLD by means of density-functional theory calculations (Chem. Mater. 2016, 28, 1975). Here, we address the key questions that will ultimately allow one to optimize the scalability of the MLD process. First, we show that dopant coverage control cannot be achieved by simultaneous reaction of several group V elements, but stepwise reactions make it possible. Second, using ab initio molecular dynamics, we investigate the thermal decomposition of the molecular precursors, together with the stability of the corresponding binary and ternary dopant oxides, prior to the dopant diffusion into the semiconductor surface. Finally, the effect of the coverage and type of dopant on the electronic properties of the semiconductor is also analyzed. Furthermore, the atomistic characterization of the MLD process raises unexpected questions regarding possible crystal damage effects by dopant exchange with the semiconductor ions or the final distribution of the doping impurities within the crystal structure. By combining all our results, optimization recipes to create ultrashallow doped junctions at the nanoscale are finally proposed.

  19. Sensitivity of high-frequency Rayleigh-wave data revisited

    USGS Publications Warehouse

    Xia, J.; Miller, R.D.; Ivanov, J.

    2007-01-01

    Rayleigh-wave phase velocity of a layered earth model is a function of frequency and four groups of earth properties: P-wave velocity, S-wave velocity (Vs), density, and thickness of layers. Analysis of the Jacobian matrix (or the difference method) provides a measure of dispersion curve sensitivity to earth properties. Vs is the dominant influence for the fundamental mode (Xia et al., 1999) and higher modes (Xia et al., 2003) of dispersion curves in a high frequency range (>2 Hz) followed by layer thickness. These characteristics are the foundation of determining S-wave velocities by inversion of Rayleigh-wave data. More applications of surface-wave techniques show an anomalous velocity layer such as a high-velocity layer (HVL) or a low-velocity layer (LVL) commonly exists in near-surface materials. Spatial location (depth) of an anomalous layer is usually the most important information that surface-wave techniques are asked to provide. Understanding and correctly defining the sensitivity of high-frequency Rayleigh-wave data due to depth of an anomalous velocity layer are crucial in applying surface-wave techniques to obtain a Vs profile and/or determine the depth of an anomalous layer. Because depth is not a direct earth property of a layered model, changes in depth will result in changes in other properties. Modeling results show that sensitivity at a given depth calculated by the difference method is dependent on the Vs difference (contrast) between an anomalous layer and surrounding layers. The larger the contrast is, the higher the sensitivity due to depth of the layer. Therefore, the Vs contrast is a dominant contributor to sensitivity of Rayleigh-wave data due to depth of an anomalous layer. Modeling results also suggest that the most sensitive depth for an HVL is at about the middle of the depth to the half-space, but for an LVL it is near the ground surface. ?? 2007 Society of Exploration Geophysicists.

  20. A multiplex PCR method discriminating between the TYLCV and TYLCV-Mld clades of tomato yellow leaf curl virus.

    PubMed

    Lefeuvre, P; Hoareau, M; Delatte, H; Reynaud, B; Lett, J-M

    2007-09-01

    Tomato yellow leaf curl virus (TYLCV) is one of the causal agents of tomato yellow leaf curl disease (TYLCD) and can cause up to 100% yield losses in tomato fields. As TYLCV continues to spread, many isolates have been described in different parts of the world. Recently two closely related but distinct TYLCV clades, called TYLCV and TYLCV-Mld, have been identified. Isolates from those two clades differ mainly in the nucleotide sequences of their replication associated protein genes but do not display significantly different symptomatology. In order to improve monitoring of the rapidly expanding worldwide TYLCD epidemic, a multiplex polymerase chain reaction assay (mPCR) was developed. A set of three primers were designed to detect and characterize the TYLCV and TYLCV-Mld clade isolates. The specificity and sensitivity of the mPCR were validated on TYLCV infected tomato plants and Bemisia tabaci whiteflies. Being cheap, fast and highly sensitive this new diagnostic tool should greatly simplify efforts to trace the global spread of TYLCV.

  1. [Metachromatic Leukodystrophy. Case Presentation].

    PubMed

    Espejo, Lina María; de la Espriella, Ricardo; Hernández, José Fernando

    Metachromatic leukodystrophy (MLD) is a rare demyelinating disease (prevalence 1:40 000), also called arylsulfatase A deficiency (ARS-A), which may present with neurological and psychiatric symptoms. Clinical assessment may be difficult, due to unspecific signs and symptoms. A case is presented of a 16 year-old female patient seen in psychiatry due to behavioural changes, psychosis, and with impaired overall performance. She was initially diagnosed with schizophrenia, but the Nuclear Magnetic Resonance (NMR) scan and laboratory tests lead to the diagnosis of MLD. Copyright © 2016 Asociación Colombiana de Psiquiatría. Publicado por Elsevier España. All rights reserved.

  2. Embedding Number-Combinations Practice Within Word-Problem Tutoring

    PubMed Central

    Powell, Sarah R.; Fuchs, Lynn S.; Fuchs, Douglas

    2012-01-01

    Two aspects of mathematics with which students with mathematics learning difficulty (MLD) often struggle are word problems and number-combination skills. This article describes a math program in which students receive instruction on using algebraic equations to represent the underlying problem structure for three word-problem types. Students also learn counting strategies for answering number combinations that they cannot retrieve from memory. Results from randomized-control trials indicated that embedding the counting strategies for number combinations produces superior word-problem and number-combination outcomes for students with MLD beyond tutoring programs that focus exclusively on number combinations or word problems. PMID:22661880

  3. Embedding Number-Combinations Practice Within Word-Problem Tutoring.

    PubMed

    Powell, Sarah R; Fuchs, Lynn S; Fuchs, Douglas

    2010-09-01

    Two aspects of mathematics with which students with mathematics learning difficulty (MLD) often struggle are word problems and number-combination skills. This article describes a math program in which students receive instruction on using algebraic equations to represent the underlying problem structure for three word-problem types. Students also learn counting strategies for answering number combinations that they cannot retrieve from memory. Results from randomized-control trials indicated that embedding the counting strategies for number combinations produces superior word-problem and number-combination outcomes for students with MLD beyond tutoring programs that focus exclusively on number combinations or word problems.

  4. Relationship Between the Sonic Layer Depth and Mixed Layer Depth Identified from U.S. Navy Sea Glider Data

    DTIC Science & Technology

    2014-09-01

    LAYER DEPTH AND MIXED LAYER DEPTH IDENTIFIED FROM U.S. NAVY SEA GLIDER DATA Vance A. Villarreal September 2014 Thesis Advisor: Peter C. Chu Second...searching existing data sources, gathering and maintaining the data needed, and completing and reviewing the collection of information. Send comments...DEPTH IDENTIFIED FROM U.S. NAVY SEA GLIDER DATA 5. FUNDING NUMBERS 6. AUTHOR(S) Vance A. Villarreal 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES

  5. Pharmacokinetics and brain uptake in the rhesus monkey of a fusion protein of arylsulfatase a and a monoclonal antibody against the human insulin receptor.

    PubMed

    Boado, Ruben J; Lu, Jeff Zhiqiang; Hui, Eric K-W; Sumbria, Rachita K; Pardridge, William M

    2013-05-01

    Metachromatic leukodystrophy (MLD) is a lysosomal storage disorder of the brain caused by mutations in the gene encoding the lysosomal sulfatase, arylsulfatase A (ASA). It is not possible to treat the brain in MLD with recombinant ASA, because the enzyme does not cross the blood-brain barrier (BBB). In the present investigation, a BBB-penetrating IgG-ASA fusion protein is engineered and expressed, where the ASA monomer is fused to the carboxyl terminus of each heavy chain of an engineered monoclonal antibody (MAb) against the human insulin receptor (HIR). The HIRMAb crosses the BBB via receptor-mediated transport on the endogenous BBB insulin receptor, and acts as a molecular Trojan horse to ferry the ASA into brain from blood. The HIRMAb-ASA is expressed in stably transfected Chinese hamster ovary cells grown in serum free medium, and purified by protein A affinity chromatography. The fusion protein retains high affinity binding to the HIR, EC50 = 0.34 ± 0.11 nM, and retains high ASA enzyme activity, 20 ± 1 units/mg. The HIRMAb-ASA fusion protein is endocytosed and triaged to the lysosomal compartment in MLD fibroblasts. The fusion protein was radio-labeled with the Bolton-Hunter reagent, and the [(125) I]-HIRMAb-ASA rapidly penetrates the brain in the Rhesus monkey following intravenous administration. Film and emulsion autoradiography of primate brain shows global distribution of the fusion protein throughout the monkey brain. These studies describe a new biological entity that is designed to treat the brain of humans with MLD following non-invasive, intravenous infusion of an IgG-ASA fusion protein. Copyright © 2012 Wiley Periodicals, Inc.

  6. Phthalates in Commercial Chinese Rice Wines: Concentrations and the Cumulative Risk Assessment to Adult Males in Shanghai.

    PubMed

    Huang, Yue; Lu, Wen Wei; Chen, Bo; You, Jie; Wu, Min; Li, Shu Guang

    2014-10-01

    The concentrations of 16 phthalates in 164 commercial Chinese rice wines (CRW) were detected by GC-MS, and consumption data on CRW in different packaging types was investigated from 634 adult males in Shanghai using a food frequency questionnaire. Based on the principles of probabilistic modelling and cumulative risk assessment, the exposure and health risk of phthalates from CRW to adult males in Shanghai was evaluated. DMP, DEP, DIBP, DnBP, BBP, and DEHP were detected in the samples, the range of detection frequency of individual phthalates varied from 6.10% for BBP to 15.24% for DIBP, and the detected concentrations were 51.06-200.34 ng/mL. All the respondents consumed CRW, 90.69% of them consumed CRW 0.01-49.9 mL/d, the minimum value of the average daily intake of CRW was 6.25 mL/d, the median was 13.72 mL/d and the maximum was 300 mL/d. The median exposure level of the 6 detected Phthalates to adult males in Shanghai were 6.58-7.10 ng/(d•kg), and the maximum exposure level were 137.38-540.47 ng/(d•kg). The cumulative exposure health risk index (HI) based on the median and maximum exposure level of the 6 Phthalates (DMP, DEP, DIBP, DnBP, BBP, and DEHP) were 0.001147 and 0.063396, both were far less than 1. In conclusion, CRW were generally consumed by the adult males in Shanghai, although multiple phthalates were detected in commercial CRW, health risk of such exposure levels from commercial CRW to the target adult males in Shanghai was very low. Copyright © 2014 The Editorial Board of Biomedical and Environmental Sciences. Published by China CDC. All rights reserved.

  7. Improved correlation between CT emphysema quantification and pulmonary function test by density correction of volumetric CT data based on air and aortic density.

    PubMed

    Kim, Song Soo; Seo, Joon Beom; Kim, Namkug; Chae, Eun Jin; Lee, Young Kyung; Oh, Yeon Mok; Lee, Sang Do

    2014-01-01

    To determine the improvement of emphysema quantification with density correction and to determine the optimal site to use for air density correction on volumetric computed tomography (CT). Seventy-eight CT scans of COPD patients (GOLD II-IV, smoking history 39.2±25.3 pack-years) were obtained from several single-vendor 16-MDCT scanners. After density measurement of aorta, tracheal- and external air, volumetric CT density correction was conducted (two reference values: air, -1,000 HU/blood, +50 HU). Using in-house software, emphysema index (EI) and mean lung density (MLD) were calculated. Differences in air densities, MLD and EI prior to and after density correction were evaluated (paired t-test). Correlation between those parameters and FEV1 and FEV1/FVC were compared (age- and sex adjusted partial correlation analysis). Measured densities (HU) of tracheal- and external air differed significantly (-990 ± 14, -1016 ± 9, P<0.001). MLD and EI on original CT data, after density correction using tracheal- and external air also differed significantly (MLD: -874.9 ± 27.6 vs. -882.3 ± 24.9 vs. -860.5 ± 26.6; EI: 16.8 ± 13.4 vs. 21.1 ± 14.5 vs. 9.7 ± 10.5, respectively, P<0.001). The correlation coefficients between CT quantification indices and FEV1, and FEV1/FVC increased after density correction. The tracheal air correction showed better results than the external air correction. Density correction of volumetric CT data can improve correlations of emphysema quantification and PFT. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  8. Consequences, Characteristics, and Causes of Mathematical Learning Disabilities and Persistent Low Achievement in Mathematics

    PubMed Central

    Geary, David C.

    2011-01-01

    Objective The goals of the review are threefold; a) to highlight the educational and employment consequences of poorly developed mathematical competencies; b) overview the characteristics of the children with persistently low achievement in mathematics; and c) provide a primer on cognitive science research that is aimed at identifying the cognitive mechanisms underlying these learning disabilities and associated cognitive interventions. Method Literatures on the educational and economic consequences of poor mathematics achievement were reviewed and integrated with reviews of epidemiological, behavioral genetic, and cognitive science studies of poor mathematics achievement. Results Poor mathematical competencies are common among adults and result in employment difficulties and difficulties in many common day-to-day activities. Among students, about 7% of children and adolescents have a mathematical learning disability (MLD) and another 10% show persistent low achievement (LA) in mathematics despite average abilities in most other areas. Children with MLD and their LA peers have deficits in understanding and representing numerical magnitude, difficulties retrieving basic arithmetic facts from long-term memory, and delays in learning mathematical procedures. These deficits and delays cannot be attributed to intelligence, but are related to working memory deficits for children with MLD, but not LA children. Interventions that target these cognitive deficits are in development and preliminary results are promising. Conclusion Mathematical learning disabilities and learning difficulties associated with persistent low achievement in mathematics are common and not attributable to intelligence. These individuals have identifiable number and memory delays and deficits that appear to be specific to mathematics learning. The most promising interventions are those that target these specific deficits and, in addition, for children with MLD interventions that target their low working memory capacity. PMID:21285895

  9. Vertical Mixing Effects on Phytoplankton Dynamics and Organic Carbon Export in the Western Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Kessouri, Faycal; Ulses, Caroline; Estournel, Claude; Marsaleix, Patrick; D'Ortenzio, Fabrizio; Severin, Tatiana; Taillandier, Vincent; Conan, Pascal

    2018-03-01

    A 3-D high-resolution coupled hydrodynamic-biogeochemical model of the western Mediterranean was used to study phytoplankton dynamics and organic carbon export in three regions with contrasting vertical regimes, ranging from deep convection to a shallow mixed layer. One month after the initial increase in surface chlorophyll (caused by the erosion of the deep chlorophyll maximum), the autumnal bloom was triggered in all three regions by the upward flux of nutrients resulting from mixed layer deepening. In contrast, at the end of winter, the end of turbulent mixing favored the onset of the spring bloom in the deep convection region. Low grazing pressure allowed rapid phytoplankton growth during the bloom. Primary production in the shallow mixed layer region, the Algerian subbasin, was characterized by a long period (4 months) of sustained phytoplankton development, unlike the deep convection region where primary production was inhibited during 2 months in winter. Despite seasonal variations, annual primary production in all three regions is similar. In the deep convection region, total organic carbon export below the photic layer (150 m) and transfer to deep waters (800 m) was 5 and 8 times, respectively, higher than in the Algerian subbasin. Although some of the exported material will be injected back into the surface layer during the next convection event, lateral transport, and strong interannual variability of MLD in this region suggest that a significant amount of exported material is effectively sequestrated.

  10. Influence of cutting parameters on the depth of subsurface deformed layer in nano-cutting process of single crystal copper.

    PubMed

    Wang, Quanlong; Bai, Qingshun; Chen, Jiaxuan; Su, Hao; Wang, Zhiguo; Xie, Wenkun

    2015-12-01

    Large-scale molecular dynamics simulation is performed to study the nano-cutting process of single crystal copper realized by single-point diamond cutting tool in this paper. The centro-symmetry parameter is adopted to characterize the subsurface deformed layers and the distribution and evolution of the subsurface defect structures. Three-dimensional visualization and measurement technology are used to measure the depth of the subsurface deformed layers. The influence of cutting speed, cutting depth, cutting direction, and crystallographic orientation on the depth of subsurface deformed layers is systematically investigated. The results show that a lot of defect structures are formed in the subsurface of workpiece during nano-cutting process, for instance, stair-rod dislocations, stacking fault tetrahedron, atomic clusters, vacancy defects, point defects. In the process of nano-cutting, the depth of subsurface deformed layers increases with the cutting distance at the beginning, then decreases at stable cutting process, and basically remains unchanged when the cutting distance reaches up to 24 nm. The depth of subsurface deformed layers decreases with the increase in cutting speed between 50 and 300 m/s. The depth of subsurface deformed layer increases with cutting depth, proportionally, and basically remains unchanged when the cutting depth reaches over 6 nm.

  11. Correlation of Pliocene and Pleistocene tephra layers between the Turkana Basin of East Africa and the Gulf of Aden

    USGS Publications Warehouse

    Brown, F.H.; Sarna-Wojcicki, A. M.; Meyer, C.E.; Haileab, B.

    1992-01-01

    Electron-microprobe analyses of glass shards from volcanic ash in Pliocene and Pleistocene deep-sea sediments in the Gulf of Aden and the Somali Basin demonstrate that most of the tephra layers correlate with tephra layers known on land in the Turkana Basin of northern Kenya and southern Ethiopia. Previous correlations are reviewed, and new correlations proposed. Together these data provide correlations between the deep-sea cores, and to the land-based sections at eight levels ranging in age from about 4 to 0.7 Ma. Specifically, we correlate the Moiti Tuff (???4.1 Ma) with a tephra layer at 188.6 m depth in DSDP hole 231 and with a tephra layer at 150 m depth in DSDP hole 241, the Wargolo Tuff with a tephra layer at 179.7 m in DSDP Hole 231 and with a tephra layer at 155.3 m depth in DSDP Hole 232, the Lomogol Tuff (defined here) with a tephra layer at 165 m in DSDP Hole 232A, the Lokochot Tuff with a tephra layer at 140.1 m depth in DSDP Hole 232, the Tulu Bor Tuff with a tephra layer at 160.8 m depth in DSDP Hole 231, the Kokiselei Tuff with a tephra layer at 120 m depth in DSDP Hole 231 and with a tephra layer at 90.3 m depth in DSDP Hole 232, the Silbo Tuff (0.74 Ma) with a tephra layer at 35.5 m depth in DSDP Hole 231 and possibly with a tephra layer at 10.9 m depth in DSDP Hole 241. We also present analyses of other tephra from the deep sea cores for which correlative units on land are not yet known. The correlated tephra layers provide eight chronostratigraphic horizons that make it possible to temporally correlate paleoecological and paleoclimatic data between the terrestrial and deep-sea sites. Such correlations may make it possible to interpret faunal evolution in the Lake Turkana basin and other sites in East Africa within a broader regional or global paleoclimatic context. ?? 1992.

  12. Effects of manual lymph drainage on cardiac autonomic tone in healthy subjects.

    PubMed

    Kim, Sung-Joong; Kwon, Oh-Yun; Yi, Chung-Hwi

    2009-01-01

    This study was designed to investigate the effects of manual lymph drainage on the cardiac autonomic tone. Thirty-two healthy male subjects were randomly assigned to manual lymph drainage (MLD) (experimental) and rest (control) groups. Electrocardiogram (ECG) parameters were recorded with bipolar electrocardiography using standard limb lead positions. The pressure-pain threshold (PPT) was quantitatively measured using an algometer. Heart rate variability differed significantly between the experimental and control groups (p < 0.05), but the PPT in the upper trapezius muscle did not (p > 0.05). These findings indicate that the application of MLD was effective in reducing the activity of the sympathetic nervous system.

  13. Cichoric acid improved hyperglycaemia and restored muscle injury via activating antioxidant response in MLD-STZ-induced diabetic mice.

    PubMed

    Zhu, Di; Zhang, Xinglin; Niu, Yajie; Diao, Zhijun; Ren, Bo; Li, Xingyu; Liu, Zhigang; Liu, Xuebo

    2017-09-01

    Cichoric acid (CA), extracted from edible plants and vegetables, is a potential natural nutraceutical, with antioxidant and hypoglycaemic biological functions. The objective of this study was to explore the potential underlying molecular mechanisms involved in normalizing diabetes-related changes in hyperglycaemia via pancreas apoptosis and muscle injury induced by multiple low-dose STZ (MLD-STZ) injection in response to dietary supplementation with CA. To induce the MLD-STZ diabetic mice, the C57BL/6J mice were intraperitoneally injected with STZ (50 mg/kg body weight) for consecutive five days. CA (60 mg/kg/d) was supplemented in drinking water for 4 weeks. Compared with control, CA inhibited pancreas apoptosis and adjusted islet function in diabetic mice, leading to an increase in insulin generation and secretion. Moreover, CA regulated mitochondrial biogenesis, glycogen synthesis, and inhibited inflammation via activating antioxidant responses, which contributes to the improvement in athletic ability and diabetic myopathy. In general, CA is a natural food-derived compound with the potential application for regulating glucose homeostasis and improving diabetes and its complications. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. Gene therapy for metachromatic leukodystrophy.

    PubMed

    Rosenberg, Jonathan B; Kaminsky, Stephen M; Aubourg, Patrick; Crystal, Ronald G; Sondhi, Dolan

    2016-11-01

    Leukodystrophies (LDs) are rare, often devastating genetic disorders with neurologic symptoms. There are currently no disease-specific therapeutic approaches for these diseases. In this review we use metachromatic leukodystrophy as an example to outline in the brief the therapeutic approaches to MLD that have been tested in animal models and in clinical trials, such as enzyme-replacement therapy, bone marrow/umbilical cord blood transplants, ex vivo transplantation of genetically modified hematopoietic stem cells, and gene therapy. These studies suggest that to be successful the ideal therapy for MLD must provide persistent and high level expression of the deficient gene, arylsulfatase A in the CNS. Gene therapy using adeno-associated viruses is therefore the ideal choice for clinical development as it provides the best balance of potential for efficacy with reduced safety risk. Here we have summarized the published preclinical data from our group and from others that support the use of a gene therapy with AAVrh.10 serotype for clinical development as a treatment for MLD, and as an example of the potential of gene therapy for LDs especially for Krabbe disease, which is the focus of this special issue. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  15. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kreysing, J.; Bohne, W.; Boesenberg, C.

    The authors identified a patient suffering from late-infantile metachromatic leukodystrophy (MLD) who has a residual arylsulfatase A (ARSA) activity of about 10%. Fibroblasts of the patient show significant sulfatide degradation activity exceeding that of adult MLD patients. Analysis of the ARSA gene in this patient revealed heterozygosity for two new mutant alleles: in one allele, deletion of C 447 in exon 2 leads to a frameshift and to a premature stop codon at amino acid position 105; in the second allele, a G[yields]A transition in exon 5 causes a Gly[sup 309][yields]Ser substitution. Transient expression of the mutant Ser[sup 309]-ARSA resultedmore » in only 13% enzyme activity of that observed in cells expressing normal ARSA. The mutant ARSA is correctly targeted to the lyosomes but is unstable. These findings are in contrast to previous results showing that the late-infantile type of MLD is always associated with the complete absence of ARSA activity. The expression of the mutant ARSA protein may be influenced by particular features of oligodendrocytes, such that the level of mutant enzymes is lower in these cells than in others. 23 refs., 4 figs., 2 tabs.« less

  16. Experimental Constraints on Silicic Slab Melt and Depleted Mantle Reaction in the Presence of CO2-H2O: Implications for the Origin of Mid Lithospheric Discontinuity

    NASA Astrophysics Data System (ADS)

    Saha, S.; Dasgupta, R.; Tsuno, K.

    2016-12-01

    Seismic shear wave velocity, VS drop (upto 24% and mostly 2-7%) observed globally beneath continents at depths of 60-160 km, known as the Mid Lithospheric Discontinuity (MLD) [e.g., 1], is an enigmatic feature of cratons whose origin is highly debated [e.g., 2, 3]. One of the mechanisms that can explain the MLD is the presence of volatile bearing phases such as partial melts and/or hydrous or carbonate minerals at depths. However, the compositional vector and geodynamic scenario required for their formation and the proportion and composition of infiltrating melt or fluid that may lead to their stability is poorly known at present. We performed high P-T experiments equilibrating a depleted peridotite (Mg# 92) with variable proportion of a H2O-CO2 bearing silicic melt, interaction that could occur during the formation of continents by imbrication of slabs. The first set of experiments were performed with 10 wt.% melt (0.9 wt.% H2O and 0.5 wt.% CO2 in the bulk) at 950-1175 °C at 3 GPa using a piston cylinder and 950-1150 °C at 4 GPa using a multi anvil apparatus. Olivine, opx, cpx, garnet/spinel and phlogopite (5-6%) are present in all runs. Amphibole (3.5-9.5%) is present at 3 GPa and ≤1050 °C. Magnesite ( 1%) is present at ≤1000 °C at 3 and ≤1050 °C at 4 GPa. Trace melt is observed along the grain boundaries above 1000 °C at 3 GPa and 1050 ° C at 4 GPa, respectively. Mineral modes obtained by mass balance calculations, ignoring the presence of melts, were used to calculate VS of the resulting assemblages [4]. The calculated drops in VS at 3 GPa (3.8-4.5%) and 4 GPa (1.6-3.2%) are well within the range of velocity drops for MLDs observed globally. Further experiments on different melt-rock ratios are underway and will constrain how modal proportion of hydrous and carbonate minerals varies as a function of melt:rock ratio and bulk volatile contents. [1] Abt et al., 2010, JGR; [2] Rader et al., 2015, G3; [3] Karato et al., 2015, NatGeo [4] Abers & Hacker, 2016, G3

  17. Directly Formed Alucone on Lithium Metal for High-Performance Li Batteries and Li-S Batteries with High Sulfur Mass Loading.

    PubMed

    Chen, Lin; Huang, Zhennan; Shahbazian-Yassar, Reza; Libera, Joseph A; Klavetter, Kyle C; Zavadil, Kevin R; Elam, Jeffrey W

    2018-02-28

    Lithium metal is considered the "holy grail" of next-generation battery anodes. However, severe parasitic reactions at the lithium-electrolyte interface deplete the liquid electrolyte and the uncontrolled formation of high surface area and dendritic lithium during cycling causes rapid capacity fading and battery failure. Engineering a dendrite-free lithium metal anode is therefore critical for the development of long-life batteries using lithium anodes. In this study, we deposit a conformal, organic/inorganic hybrid coating, for the first time, directly on lithium metal using molecular layer deposition (MLD) to alleviate these problems. This hybrid organic/inorganic film with high cross-linking structure can stabilize lithium against dendrite growth and minimize side reactions, as indicated by scanning electron microscopy. We discovered that the alucone coating yielded several times longer cycle life at high current rates compared to the uncoated lithium and achieved a steady Coulombic efficiency of 99.5%, demonstrating that the highly cross-linking structured material with great mechanical properties and good flexibility can effectively suppress dendrite formation. The protected Li was further evaluated in lithium-sulfur (Li-S) batteries with a high sulfur mass loading of ∼5 mg/cm 2 . After 140 cycles at a high current rate of ∼1 mA/cm 2 , alucone-coated Li-S batteries delivered a capacity of 657.7 mAh/g, 39.5% better than that of a bare lithium-sulfur battery. These findings suggest that flexible coating with high cross-linking structure by MLD is effective to enable lithium protection and offers a very promising avenue for improved performance in the real applications of Li-S batteries.

  18. Zonally asymmetric response of the Southern Ocean mixed-layer depth to the Southern Annular Mode

    NASA Astrophysics Data System (ADS)

    Sallée, J. B.; Speer, K. G.; Rintoul, S. R.

    2010-04-01

    Interactions between the atmosphere and ocean are mediated by the mixed layer at the ocean surface. The depth of this layer is determined by wind forcing and heating from the atmosphere. Variations in mixed-layer depth affect the rate of exchange between the atmosphere and deeper ocean, the capacity of the ocean to store heat and carbon and the availability of light and nutrients to support the growth of phytoplankton. However, the response of the Southern Ocean mixed layer to changes in the atmosphere is not well known. Here we analyse temperature and salinity data from Argo profiling floats to show that the Southern Annular Mode (SAM), the dominant mode of atmospheric variability in the Southern Hemisphere, leads to large-scale anomalies in mixed-layer depth that are zonally asymmetric. From a simple heat budget of the mixed layer we conclude that meridional winds associated with departures of the SAM from zonal symmetry cause anomalies in heat flux that can, in turn, explain the observed changes of mixed-layer depth and sea surface temperature. Our results suggest that changes in the SAM, including recent and projected trends attributed to human activity, drive variations in Southern Ocean mixed-layer depth, with consequences for air-sea exchange, ocean sequestration of heat and carbon, and biological productivity.

  19. Spatial and temporal variation of net community production and its regulating factors in the Amundsen Sea, Antarctica

    NASA Astrophysics Data System (ADS)

    Hahm, Doshik; Rhee, Tae Siek; Kim, Hae-Cheol; Park, Jisoo; Kim, Young-Nam; Shin, Hyoung Chul; Lee, SangHoon

    2014-05-01

    We observed ΔO2/Ar in the surface waters of the Amundsen Sea, Antarctica, during the austral summers in 2011 and 2012 to investigate the variability of net community production (NCP). Corresponding to the typical peak phytoplankton bloom period, the ΔO2/Ar of the Amundsen Sea Polynya (ASP) reached 30% in early January 2011 and had a strong positive correlation with the sea surface temperature (SST) and chlorophyll-a (Chl-a). In contrast, ΔO2/Ar decreased to -10% in the sea ice zone (SIZ), which was likely associated with either net O2 consumption in the unlit area or the entrainment of deep water containing low dissolved oxygen. Near the terminal stage of the phytoplankton bloom in late February 2012, we observed the same contrasting ΔO2/Ar features between the ASP and SIZ. However, the ΔO2/Ar in the ASP was not >10%, which corresponded with the overall reduction in Chl-a, solar radiation, and SST compared with the corresponding values in 2011. The average net community production in the ASP was 119 ± 79 mmol O2 m-2 d-1 in January 2011, and 23 ± 14 mmol O2 m-2 d-1 in February 2012. The strong correlations of NCP with SST and mixed layer depth (MLD) indicate that the ASP phytoplankton bloom is likely initiated by a combination of increased light availability and SST in early summer. Low SST and variable fluorescence to maximum florescence ratio (Fv/Fm) in February indicate that decreased solar radiation and Fe availability are likely responsible for the phytoplankton bloom demise.

  20. Neural network-based estimates of Southern Ocean net community production from in-situ and satellite observation: A methodological study

    NASA Astrophysics Data System (ADS)

    Chang, C.; Johnson, N. C.; Cassar, N.

    2012-12-01

    Although the Southern Ocean (SO) net community production (NCP), which is the difference between gross primary production and the community respiration rate, plays an important role in the global carbon cycle, limited in situ measurements prohibit a thorough understanding of the climatology and variability NCP in this region. In order to achieve a more comprehensive characterization of temporal and spatial variability of Southern Ocean NCP, we use a neural network approach based on the self-organizing map (SOM) to reconstruct weekly gridded (1o x 1o) SO NCP maps for the period of 1998-2009. This approach combines in situ measurements of NCP from over 40 research cruises with satellite-derived NCP predictor data, which includes chlorophyll (Chl), particulate organic carbon (POC), photosynthetically available radiation (PAR), sea surface height (SSH), and sea surface temperature (SST), as well as the mixed layer depth (MLD) from a high-resolution ocean general circulation model forced with satellite observed wind. The resulting NCP reconstructions reveal a number of salient features, including low NCP in the subtropics except near land masses, elevated NCP along the subtropical front (STF) around 40oS and especially off the Atlantic coast of the South America between the Río de la Plata and the Falkland Island, and moderate NCP values near Kerguelen Islands and along the Antarctic coast. Peak SO NCP occurs during November - January, as expected, and the climatological NCP field during the growing season closely resembles the climatological POC field. This neural network approach, which reveals complex nonlinear relationships and readily handles missing predictor data, provides a comprehensive view of SO NCP and an opportunity to investigate variability over a period of more than ten years. Convergence of various approaches;

  1. Development of Product Relatedness and Distance Effects in Typical Achievers and in Children With Mathematics Learning Disabilities.

    PubMed

    Rotem, Avital; Henik, Avishai

    2015-01-01

    The current study examined the development of two effects that have been found in single-digit multiplication errors: relatedness and distance. Typically achieving (TA) second, fourth, and sixth graders and adults, and sixth and eighth graders with a mathematics learning disability (MLD) performed a verification task. Relatedness was defined by a slow and inaccurate response to false results that were related to one of the operands via a shared multiplication row (e.g., 3 × 4 = 16). Distance was defined by a slow and inaccurate response to false results that were close in magnitude to the true result (e.g., 6 × 8 = 49). The presence of these effects indicates that participants are sensitive to numerical features of products. TA children demonstrated sensitivity to relatedness and distance from second grade onward. With age their sensitivity expanded from easy problems (e.g., 2 × 3) to difficult ones (e.g., 8 × 9). Children with MLD were sensitive to relatedness on easy problems. Their sensitivity to distance differed from the pattern seen in sixth grade and was partial in eighth grade. The presence of numerical sensitivity in children with MLD calls for instructional methods that would further develop their number sense. © Hammill Institute on Disabilities 2014.

  2. Including Short Period Constraints In the Construction of Full Waveform Tomographic Models

    NASA Astrophysics Data System (ADS)

    Roy, C.; Calo, M.; Bodin, T.; Romanowicz, B. A.

    2015-12-01

    Thanks to the introduction of the Spectral Element Method (SEM) in seismology, which allows accurate computation of the seismic wavefield in complex media, the resolution of regional and global tomographic models has improved in recent years. However, due to computational costs, only long period waveforms are considered, and only long wavelength structure can be constrained. Thus, the resulting 3D models are smooth, and only represent a small volumetric perturbation around a smooth reference model that does not include upper-mantle discontinuities (e.g. MLD, LAB). Extending the computations to shorter periods, necessary for the resolution of smaller scale features, is computationally challenging. In order to overcome these limitations and to account for layered structure in the upper mantle in our full waveform tomography, we include information provided by short period seismic observables (receiver functions and surface wave dispersion), sensitive to sharp boundaries and anisotropic structure respectively. In a first step, receiver functions and dispersion curves are used to generate a number of 1D radially anisotropic shear velocity profiles using a trans-dimensional Markov-chain Monte Carlo (MCMC) algorithm. These 1D profiles include both isotropic and anisotropic discontinuities in the upper mantle (above 300 km depth) beneath selected stationsand are then used to build a 3D starting model for the full waveform tomographic inversion. This model is built after 1) interpolation between the available 1D profiles, and 2) homogeneization of the layered 1D models to obtain an equivalent smooth 3D starting model in the period range of interest for waveform inversion. The waveforms used in the inversion are collected for paths contained in the region of study and filtered at periods longer than 40s. We use the spectral element code "RegSEM" (Cupillard et al., 2012) for forward computations and a quasi-Newton inversion approach in which kernels are computed using normal mode perturbation theory. We present here the first reults of such an approach after successive iterations of a full waveform tomography of the North American continent.

  3. Correlation of Clinical and Dosimetric Factors With Adverse Pulmonary Outcomes in Children After Lung Irradiation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Venkatramani, Rajkumar, E-mail: rvenkatramani@chla.usc.edu; Department of Pediatrics, Keck School of Medicine, University of Southern California, Los Angeles, California; Kamath, Sunil

    Purpose: To identify the incidence and the risk factors for pulmonary toxicity in children treated for cancer with contemporary lung irradiation. Methods and Materials: We analyzed clinical features, radiographic findings, pulmonary function tests, and dosimetric parameters of children receiving irradiation to the lung fields over a 10-year period. Results: We identified 109 patients (75 male patients). The median age at irradiation was 13.8 years (range, 0.04-20.9 years). The median follow-up period was 3.4 years. The median prescribed radiation dose was 21 Gy (range, 0.4-64.8 Gy). Pulmonary toxic chemotherapy included bleomycin in 58.7% of patients and cyclophosphamide in 83.5%. The followingmore » pulmonary outcomes were identified and the 5-year cumulative incidence after irradiation was determined: pneumonitis, 6%; chronic cough, 10%; pneumonia, 35%; dyspnea, 11%; supplemental oxygen requirement, 2%; radiographic interstitial lung disease, 40%; and chest wall deformity, 12%. One patient died of progressive respiratory failure. Post-irradiation pulmonary function tests available from 44 patients showed evidence of obstructive lung disease (25%), restrictive disease (11%), hyperinflation (32%), and abnormal diffusion capacity (12%). Thoracic surgery, bleomycin, age, mean lung irradiation dose (MLD), maximum lung dose, prescribed dose, and dosimetric parameters between V{sub 22} (volume of lung exposed to a radiation dose ≥22 Gy) and V{sub 30} (volume of lung exposed to a radiation dose ≥30 Gy) were significant for the development of adverse pulmonary outcomes on univariate analysis. MLD, maximum lung dose, and V{sub dose} (percentage of volume of lung receiving the threshold dose or greater) were highly correlated. On multivariate analysis, MLD was the sole significant predictor of adverse pulmonary outcome (P=.01). Conclusions: Significant pulmonary dysfunction occurs in children receiving lung irradiation by contemporary techniques. MLD rather than prescribed dose should be used to perform risk stratification of patients receiving lung irradiation.« less

  4. Functional image-guided stereotactic body radiation therapy planning for patients with hepatocellular carcinoma

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tsegmed, Uranchimeg; Kimura, Tomoki, E-mail: tkkimura@hiroshima-u.ac.jp; Nakashima, Takeo

    The aim of the current planning study is to evaluate the ability of gadoxetate disodium-enhanced magnetic resonance imaging (EOB-MRI)–guided stereotactic body radiation therapy (SBRT) planning by using intensity-modulated radiation therapy (IMRT) techniques in sparing the functional liver tissues during SBRT for hepatocellular carcinoma. In this study, 20 patients with hepatocellular carcinoma were enrolled. Functional liver tissues were defined according to quantitative liver-spleen contrast ratios ≥ 1.5 on a hepatobiliary phase scan. Functional images were fused with the planning computed tomography (CT) images; the following 2 SBRT plans were designed using a “step-and-shoot” static IMRT technique for each patient: (1) an anatomicalmore » SBRT plan optimization based on the total liver; and (2) a functional SBRT plan based on the functional liver. The total prescribed dose was 48 gray (Gy) in 4 fractions. Dosimetric parameters, including dose to 95% of the planning target volume (PTV D{sub 95%}), percentages of total and functional liver volumes, which received doses from 5 to 30 Gy (V5 to V30 and fV5 to fV30), and mean doses to total and functional liver (MLD and fMLD, respectively) of the 2 plans were compared. Compared with anatomical plans, functional image-guided SBRT plans reduced MLD (mean: plan A, 5.5 Gy; and plan F, 5.1 Gy; p < 0.0001) and fMLD (mean: plan A, 5.4 Gy; and plan F, 4.9 Gy; p < 0.0001), as well as V5 to V30 and fV5 to fV30. No differences were noted in PTV coverage and nonhepatic organs at risk (OARs) doses. In conclusion, EOB-MRI–guided SBRT planning using the IMRT technique may preserve functional liver tissues in patients with hepatocellular carcinoma (HCC).« less

  5. Mutation-linked, excessively tight interaction between the calmodulin binding domain and the C-terminal domain of the cardiac ryanodine receptor as a novel cause of catecholaminergic polymorphic ventricular tachycardia.

    PubMed

    Nishimura, Shigehiko; Yamamoto, Takeshi; Nakamura, Yoshihide; Kohno, Michiaki; Hamada, Yoriomi; Sufu, Yoko; Fukui, Go; Nanno, Takuma; Ishiguchi, Hironori; Kato, Takayoshi; Xu, Xiaojuan; Ono, Makoto; Oda, Tetsuro; Okuda, Shinichi; Kobayashi, Shigeki; Yano, Masafumi

    2018-06-01

    Ryanodine receptor (RyR2) is known to be a causal gene of catecholaminergic polymorphic ventricular tachycardia (CPVT), an important inherited disease. Some of the human CPVT-associated mutations have been found in a domain (4026-4172) that has EF hand motifs, the so-called calmodulin (CaM)-like domain (CaMLD). The purpose of this study was to investigate the underlying mechanism by which CPVT is induced by a mutation at CaMLD. A new N4103K/+ knock-in (KI) mice model was generated. Sustained ventricular tachycardia was frequently observed after infusion of caffeine plus epinephrine in KI mice. Endogenous CaM bound to RyR2 decreased even at baseline in isolated KI cardiomyocytes. Ca 2+ spark frequency (CaSpF) was much higher in KI cells than in wild-type cells. Addition of GSH-CaM (higher affinity CaM to RyR2) significantly decreased CaSpF. In response to isoproterenol, spontaneous Ca 2+ transient (SCaT) was frequently observed in intact KI cells. Incorporation of GSH-CaM into intact KI cells using a protein delivery kit decreased SCaT significantly. An assay using a quartz crystal microbalance technique revealed that mutated CaMLD peptide showed higher binding affinity to CaM binding domain (CaMBD) peptide. In the N4103K mutant, CaM binding affinity to RyR2 was significantly reduced regardless of beta-adrenergic stimulation. We found that this was caused by an abnormally tight interaction between CaMBD and mutated CaM-like domain (N4103K-CaMBD). Thus, CaMBD-CaMLD interaction may be a novel therapeutic target for treatment of lethal arrhythmia. Copyright © 2018 Heart Rhythm Society. Published by Elsevier Inc. All rights reserved.

  6. Incorporating Single-nucleotide Polymorphisms Into the Lyman Model to Improve Prediction of Radiation Pneumonitis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tucker, Susan L., E-mail: sltucker@mdanderson.org; Li Minghuan; Xu Ting

    2013-01-01

    Purpose: To determine whether single-nucleotide polymorphisms (SNPs) in genes associated with DNA repair, cell cycle, transforming growth factor-{beta}, tumor necrosis factor and receptor, folic acid metabolism, and angiogenesis can significantly improve the fit of the Lyman-Kutcher-Burman (LKB) normal-tissue complication probability (NTCP) model of radiation pneumonitis (RP) risk among patients with non-small cell lung cancer (NSCLC). Methods and Materials: Sixteen SNPs from 10 different genes (XRCC1, XRCC3, APEX1, MDM2, TGF{beta}, TNF{alpha}, TNFR, MTHFR, MTRR, and VEGF) were genotyped in 141 NSCLC patients treated with definitive radiation therapy, with or without chemotherapy. The LKB model was used to estimate the risk ofmore » severe (grade {>=}3) RP as a function of mean lung dose (MLD), with SNPs and patient smoking status incorporated into the model as dose-modifying factors. Multivariate analyses were performed by adding significant factors to the MLD model in a forward stepwise procedure, with significance assessed using the likelihood-ratio test. Bootstrap analyses were used to assess the reproducibility of results under variations in the data. Results: Five SNPs were selected for inclusion in the multivariate NTCP model based on MLD alone. SNPs associated with an increased risk of severe RP were in genes for TGF{beta}, VEGF, TNF{alpha}, XRCC1 and APEX1. With smoking status included in the multivariate model, the SNPs significantly associated with increased risk of RP were in genes for TGF{beta}, VEGF, and XRCC3. Bootstrap analyses selected a median of 4 SNPs per model fit, with the 6 genes listed above selected most often. Conclusions: This study provides evidence that SNPs can significantly improve the predictive ability of the Lyman MLD model. With a small number of SNPs, it was possible to distinguish cohorts with >50% risk vs <10% risk of RP when they were exposed to high MLDs.« less

  7. A Novel Phosphatidylinositol 4,5-Bisphosphate Binding Domain Mediates Plasma Membrane Localization of ExoU and Other Patatin-like Phospholipases*

    PubMed Central

    Tyson, Gregory H.; Halavaty, Andrei S.; Kim, Hyunjin; Geissler, Brett; Agard, Mallory; Satchell, Karla J.; Cho, Wonhwa; Anderson, Wayne F.; Hauser, Alan R.

    2015-01-01

    Bacterial toxins require localization to specific intracellular compartments following injection into host cells. In this study, we examined the membrane targeting of a broad family of bacterial proteins, the patatin-like phospholipases. The best characterized member of this family is ExoU, an effector of the Pseudomonas aeruginosa type III secretion system. Upon injection into host cells, ExoU localizes to the plasma membrane, where it uses its phospholipase A2 activity to lyse infected cells. The targeting mechanism of ExoU is poorly characterized, but it was recently found to bind to the phospholipid phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2), a marker for the plasma membrane of eukaryotic cells. We confirmed that the membrane localization domain (MLD) of ExoU had a direct affinity for PI(4,5)P2, and we determined that this binding was required for ExoU localization. Previously uncharacterized ExoU homologs from Pseudomonas fluorescens and Photorhabdus asymbiotica also localized to the plasma membrane and required PI(4,5)P2 for this localization. A conserved arginine within the MLD was critical for interaction of each protein with PI(4,5)P2 and for localization. Furthermore, we determined the crystal structure of the full-length P. fluorescens ExoU and found that it was similar to that of P. aeruginosa ExoU. Each MLD contains a four-helical bundle, with the conserved arginine exposed at its cap to allow for interaction with the negatively charged PI(4,5)P2. Overall, these findings provide a structural explanation for the targeting of patatin-like phospholipases to the plasma membrane and define the MLD of ExoU as a member of a new class of PI(4,5)P2 binding domains. PMID:25505182

  8. Dynamics of active layer in wooded palsas of northern Quebec

    NASA Astrophysics Data System (ADS)

    Jean, Mélanie; Payette, Serge

    2014-02-01

    Palsas are organic or mineral soil mounds having a permafrost core. Palsas are widespread in the circumpolar discontinuous permafrost zone. The annual dynamics and evolution of the active layer, which is the uppermost layer over the permafrost table and subjected to the annual freeze-thaw cycle, are influenced by organic layer thickness, snow depth, vegetation type, topography and exposure. This study examines the influence of vegetation types, with an emphasis on forest cover, on active layer dynamics of palsas in the Boniface River watershed (57°45‧ N, 76°00‧ W). In this area, palsas are often colonized by black spruce trees (Picea mariana (Mill.) B.S.P.). Thaw depth and active layer thickness were monitored on 11 wooded or non-wooded mineral and organic palsas in 2009, 2010 and 2011. Snow depth, organic layer thickness, and vegetation types were assessed. The mapping of a palsa covered by various vegetation types and a large range of organic layer thickness were used to identify the factors influencing the spatial patterns of thaw depth and active layer. The active layer was thinner and the thaw rate slower in wooded palsas, whereas it was the opposite in more exposed sites such as forest openings, shrubs and bare ground. Thicker organic layers were associated with thinner active layers and slower thaw rates. Snow depth was not an important factor influencing active layer dynamics. The topography of the mapped palsa was uneven, and the environmental factors such as organic layer, snow depth, and vegetation types were heterogeneously distributed. These factors explain a part of the spatial variation of the active layer. Over the 3-year long study, the area of one studied palsa decreased by 70%. In a context of widespread permafrost decay, increasing our understanding of factors that influence the dynamics of wooded and non-wooded palsas and understanding of the role of vegetation cover will help to define the response of discontinuous permafrost landforms to changing climatic conditions.

  9. Allogeneic Bone Marrow Transplant for Inherited Metabolic Disorders

    ClinicalTrials.gov

    2018-01-09

    Mucopolysaccharidosis; Hurler Syndrome; Hunter Syndrome; Maroteaux-Lamy Syndrome; Sly Syndrome; Alpha Mannosidosis; Fucosidosis; Aspartylglucosaminuria; Adrenoleukodystrophy (ALD); Krabbe Disease; Metachromatic Leukodystrophy (MLD); Sphingolipidoses; Peroxisomal Disorders

  10. Influence of tundra snow layer thickness on measured and modelled radar backscatter

    NASA Astrophysics Data System (ADS)

    Rutter, N.; Sandells, M. J.; Derksen, C.; King, J. M.; Toose, P.; Wake, L. M.; Watts, T.

    2017-12-01

    Microwave radar backscatter within a tundra snowpack is strongly influenced by spatial variability of the thickness of internal layering. Arctic tundra snowpacks often comprise layers consisting of two dominant snow microstructures; a basal depth hoar layer overlain by a layer of wind slab. Occasionally there is also a surface layer of decomposing fresh snow. The two main layers have strongly different microwave scattering properties. Depth hoar has a greater capacity for scattering electromagnetic energy than wind slab, however, wind slab usually has a larger snow water equivalent (SWE) than depth hoar per unit volume due to having a higher density. So, determining the relative proportions of depth hoar and wind slab from a snowpack of a known depth may help our future capacity to invert forward models of electromagnetic backscatter within a data assimilation scheme to improve modelled estimates of SWE. Extensive snow measurements were made within Trail Valley Creek, NWT, Canada in April 2013. Snow microstructure was measured at 18 pit and 9 trench locations throughout the catchment (trench extent ranged between 5 to 50 m). Ground microstructure measurements included traditional stratigraphy, near infrared stratigraphy, Specific Surface Area (SSA), and density. Coincident airborne Lidar measurements were made to estimate distributed snow depth across the catchment, in addition to airborne radar snow backscatter using a dual polarized (VV/VH) X- and Ku-band Synthetic Aperture Radar (SnowSAR). Ground measurements showed the mean proportion of depth hoar was just under 30% of total snow depth and was largely unresponsive to increasing snow depth. The mean proportion of wind slab is consistently greater than 50% and showed an increasing trend with increasing total snow depth. A decreasing trend in the mean proportion of surface snow (approximately 25% to 10%) with increasing total depth accounted for this increase in wind slab. This new knowledge of variability in stratigraphic thickness, relative to respective proportions of total snow depth, was used to investigate the representativeness of point measurements of density and microstructure for forward simulations of the SMRT microwave scattering model, using Lidar derived snow depths.

  11. Use Of Vertical Electrical Sounding Survey For Study Groundwater In NISSAH Region, SAUDI ARABIA

    NASA Astrophysics Data System (ADS)

    Alhenaki, Bander; Alsoma, Ali

    2015-04-01

    The aim of this research is to investigate groundwater depth in desert and dry environmental conditions area . The study site located in Wadi Nisah-eastern part of Najd province (east-central of Saudi Arabia), Generally, the study site is underlain by Phanerozoic sedimentary rocks of the western edge of the Arabian platform, which rests on Proterozoic basement at depths ranged between 5-8km. Another key objective of this research is to assess the water-table and identify the bearing layers structures study area by using Vertical Electrical Sounding (VES) 1D imaging technique. We have been implemented and acquired a sections of 315 meter vertical electrical soundings using Schlumberger field arrangements . These dataset were conducted along 9 profiles. The resistivity Schlumberger sounding was carried with half-spacing in the range 500 . The VES survey intend to cover several locations where existing wells information may be used for correlations. also location along the valley using the device Syscal R2 The results of this study concluded that there are at least three sedimentary layers to a depth of 130 meter. First layer, extending from the surface to a depth of about 3 meter characterized by dry sandy layer and high resistivity value. The second layer, underlain the first layer to a depth of 70 meter. This layer has less resistant compare to the first layer. Last layer, has low resistivity values of 20 ohm .m to a depth of 130 meter blow ground surface. We have observed a complex pattern of groundwater depth (ranging from 80 meter to 120 meter) which may reflect the lateral heterogeneity of study site. The outcomes of this research has been used to locate the suitable drilling locations.

  12. Hydraulic and Condition Assessment of Existing Sewerage Network: A Case Study of an Educational Institute

    NASA Astrophysics Data System (ADS)

    Sourabh, Nishant; Timbadiya, P. V.

    2018-04-01

    The hydraulic simulation of the existing sewerage network provides various information about critical points to assess the deteriorating condition and help in rehabilitation of existing network and future expansion. In the present study, hydraulic and condition assessment of existing network of educational Institute (i.e. Sardar Vallabhbhai National Institute of Technology-Surat, Gujarat, India), having an area of 100 ha and ground levels in range of 5.0-9.0 m above mean sea level, has been carried out using sewage flow simulation for existing and future scenarios analysis using SewerGEMS v8i. The paper describes the features of 4.79 km long sewerage network of institute followed by network model simulation for aforesaid scenarios and recommendations on improvement of the existing network for future use. The total sewer loads for present and future scenarios are 1.67 million litres per day (MLD) and 3.62 MLD, considering the peak factor of 3 on the basis of population. The hydraulic simulation of the existing scenario indicated depth by diameter (d/D) ratio in the range of 0.02-0.48 and velocity range of 0.08-0.53 m/s for existing network for present scenario. For the future scenario, the existing network is needed to be modified and it was found that total of 11 conduits (length: 464.8 m) should be replaced to the next higher diameter available, i.e., 350 mm for utilization of existing network for future scenario. The present study provides the methodology for condition assessment of existing network and its utilization as per guidelines provided by Central Public Health and Environmental Engineering Organization, 2013. The methodology presented in this paper can be used by municipal/public health engineer for the assessment of existing sewerage network for its serviceability and improvement in future.

  13. Hybrid Organic/Inorganic Materials Depth Profiling Using Low Energy Cesium Ions

    NASA Astrophysics Data System (ADS)

    Noël, Céline; Houssiau, Laurent

    2016-05-01

    The structures developed in organic electronics, such as organic light emitting diodes (OLEDs) or organic photovoltaics (OPVs) devices always involve hybrid interfaces, joining metal or oxide layers with organic layers. No satisfactory method to probe these hybrid interfaces physical chemistry currently exists. One promising way to analyze such interfaces is to use in situ ion beam etching, but this requires ion beams able to depth profile both inorganic and organic layers. Mono- or diatomic ion beams commonly used to depth profile inorganic materials usually perform badly on organics, while cluster ion beams perform excellently on organics but yield poor results when organics and inorganics are mixed. Conversely, low energy Cs+ beams (<500 eV) allow organic and inorganic materials depth profiling with comparable erosion rates. This paper shows a successful depth profiling of a model hybrid system made of metallic (Au, Cr) and organic (tyrosine) layers, sputtered with 500 eV Cs+ ions. Tyrosine layers capped with metallic overlayers are depth profiled easily, with high intensities for the characteristic molecular ions and other specific fragments. Metallic Au or Cr atoms are recoiled into the organic layer where they cause some damage near the hybrid interface as well as changes in the erosion rate. However, these recoil implanted metallic atoms do not appear to severely degrade the depth profile overall quality. This first successful hybrid depth profiling report opens new possibilities for the study of OLEDs, organic solar cells, or other hybrid devices.

  14. In-depth porosity control of mesoporous silicon layers by an anodization current adjustment

    NASA Astrophysics Data System (ADS)

    Lascaud, J.; Defforge, T.; Certon, D.; Valente, D.; Gautier, G.

    2017-12-01

    The formation of thick mesoporous silicon layers in P+-type substrates leads to an increase in the porosity from the surface to the interface with silicon. The adjustment of the current density during the electrochemical etching of porous silicon is an intuitive way to control the layer in-depth porosity. The duration and the current density during the anodization were varied to empirically model porosity variations with layer thickness and build a database. Current density profiles were extracted from the model in order to etch layer with in-depth control porosity. As a proof of principle, an 80 μm-thick porous silicon multilayer was synthetized with decreasing porosities from 55% to 35%. The results show that the assessment of the in-depth porosity could be significantly enhanced by taking into account the pure chemical etching of the layer in the hydrofluoric acid-based electrolyte.

  15. Mid-depth temperature maximum in an estuarine lake

    NASA Astrophysics Data System (ADS)

    Stepanenko, V. M.; Repina, I. A.; Artamonov, A. Yu; Gorin, S. L.; Lykossov, V. N.; Kulyamin, D. V.

    2018-03-01

    The mid-depth temperature maximum (TeM) was measured in an estuarine Bol’shoi Vilyui Lake (Kamchatka peninsula, Russia) in summer 2015. We applied 1D k-ɛ model LAKE to the case, and found it successfully simulating the phenomenon. We argue that the main prerequisite for mid-depth TeM development is a salinity increase below the freshwater mixed layer, sharp enough in order to increase the temperature with depth not to cause convective mixing and double diffusion there. Given that this condition is satisfied, the TeM magnitude is controlled by physical factors which we identified as: radiation absorption below the mixed layer, mixed-layer temperature dynamics, vertical heat conduction and water-sediments heat exchange. In addition to these, we formulate the mechanism of temperature maximum ‘pumping’, resulting from the phase shift between diurnal cycles of mixed-layer depth and temperature maximum magnitude. Based on the LAKE model results we quantify the contribution of the above listed mechanisms and find their individual significance highly sensitive to water turbidity. Relying on physical mechanisms identified we define environmental conditions favouring the summertime TeM development in salinity-stratified lakes as: small-mixed layer depth (roughly, ~< 2 m), transparent water, daytime maximum of wind and cloudless weather. We exemplify the effect of mixed-layer depth on TeM by a set of selected lakes.

  16. Effects of Mathematics Anxiety and Mathematical Metacognition on Word Problem Solving in Children with and without Mathematical Learning Difficulties.

    PubMed

    Lai, Yinghui; Zhu, Xiaoshuang; Chen, Yinghe; Li, Yanjun

    2015-01-01

    Mathematics is one of the most objective, logical, and practical academic disciplines. Yet, in addition to cognitive skills, mathematical problem solving also involves affective factors. In the current study, we first investigated effects of mathematics anxiety (MA) and mathematical metacognition on word problem solving (WPS). We tested 224 children (116 boys, M = 10.15 years old, SD = 0.56) with the Mathematics Anxiety Scale for Children, the Chinese Revised-edition Questionnaire of Pupil's Metacognitive Ability in Mathematics, and WPS tasks. The results indicated that mathematical metacognition mediated the effect of MA on WPS after controlling for IQ. Second, we divided the children into four mathematics achievement groups including high achieving (HA), typical achieving (TA), low achieving (LA), and mathematical learning difficulty (MLD). Because mathematical metacognition and MA predicted mathematics achievement, we compared group differences in metacognition and MA with IQ partialled out. The results showed that children with MLD scored lower in self-image and higher in learning mathematics anxiety (LMA) than the TA and HA children, but not in mathematical evaluation anxiety (MEA). MLD children's LMA was also higher than that of their LA counterparts. These results provide insight into factors that may mediate poor WPS performance which emerges under pressure in mathematics. These results also suggest that the anxiety during learning mathematics should be taken into account in mathematical learning difficulty interventions.

  17. Effects of Mathematics Anxiety and Mathematical Metacognition on Word Problem Solving in Children with and without Mathematical Learning Difficulties

    PubMed Central

    Lai, Yinghui; Zhu, Xiaoshuang; Chen, Yinghe; Li, Yanjun

    2015-01-01

    Mathematics is one of the most objective, logical, and practical academic disciplines. Yet, in addition to cognitive skills, mathematical problem solving also involves affective factors. In the current study, we first investigated effects of mathematics anxiety (MA) and mathematical metacognition on word problem solving (WPS). We tested 224 children (116 boys, M = 10.15 years old, SD = 0.56) with the Mathematics Anxiety Scale for Children, the Chinese Revised-edition Questionnaire of Pupil’s Metacognitive Ability in Mathematics, and WPS tasks. The results indicated that mathematical metacognition mediated the effect of MA on WPS after controlling for IQ. Second, we divided the children into four mathematics achievement groups including high achieving (HA), typical achieving (TA), low achieving (LA), and mathematical learning difficulty (MLD). Because mathematical metacognition and MA predicted mathematics achievement, we compared group differences in metacognition and MA with IQ partialled out. The results showed that children with MLD scored lower in self-image and higher in learning mathematics anxiety (LMA) than the TA and HA children, but not in mathematical evaluation anxiety (MEA). MLD children’s LMA was also higher than that of their LA counterparts. These results provide insight into factors that may mediate poor WPS performance which emerges under pressure in mathematics. These results also suggest that the anxiety during learning mathematics should be taken into account in mathematical learning difficulty interventions. PMID:26090806

  18. Human urine-derived stem cells play a novel role in the treatment of STZ-induced diabetic mice.

    PubMed

    Zhao, Tianxue; Luo, Deng; Sun, Yun; Niu, Xin; Wang, Yang; Wang, Chen; Jia, Weiping

    2018-04-19

    Human urine-derived stem cells (hUSCs) are a potential stem cell source for cell therapy. However, the effect of hUSCs on glucose metabolism regulation in type 1 diabetes was not clear. Therefore, the aim of the study was to evaluate whether hUSCs have protective effect on streptozotocin (STZ)-induced diabetes. hUSCs were extracted and cultivated with a special culture medium. Flow cytometry analysis was applied to detect cell surface markers. BALB/c male nude mice were either injected with high-dose STZ (HD-STZ) or multiple low-dose STZ (MLD-STZ). Serum and pancreatic insulin were measured, islet morphology and its vascularization were investigated. hUSCs highly expressed CD29, CD73, CD90 and CD146, and could differentiate into, at least, bone and fat in vitro. Transplantation of hUSCs into HD-STZ treated mice prolonged the median survival time and improved their blood glucose, and into those with MLD-STZ improved the glucose tolerance, islet morphology and increased the serum and pancreas insulin content. Furthermore, CD31 expression increased significantly in islets of BALB/c nude mice treated with hUSCs compared to those of un-transplanted MLD-STZ mice. hUSCs could improve the median survival time and glucose homeostasis in STZ-treated mice through promoting islet vascular regeneration and pancreatic beta-cell survival.

  19. Posture and activity recognition and energy expenditure estimation in a wearable platform.

    PubMed

    Sazonov, Edward; Hegde, Nagaraj; Browning, Raymond C; Melanson, Edward L; Sazonova, Nadezhda A

    2015-07-01

    The use of wearable sensors coupled with the processing power of mobile phones may be an attractive way to provide real-time feedback about physical activity and energy expenditure (EE). Here, we describe the use of a shoe-based wearable sensor system (SmartShoe) with a mobile phone for real-time recognition of various postures/physical activities and the resulting EE. To deal with processing power and memory limitations of the phone, we compare the use of support vector machines (SVM), multinomial logistic discrimination (MLD), and multilayer perceptrons (MLP) for posture and activity classification followed by activity-branched EE estimation. The algorithms were validated using data from 15 subjects who performed up to 15 different activities of daily living during a 4-h stay in a room calorimeter. MLD and MLP demonstrated activity classification accuracy virtually identical to SVM (∼ 95%) while reducing the running time and the memory requirements by a factor of >10 3. Comparison of per-minute EE estimation using activity-branched models resulted in accurate EE prediction (RMSE = 0.78 kcal/min for SVM and MLD activity classification, 0.77 kcal/min for MLP versus RMSE of 0.75 kcal/min for manual annotation). These results suggest that low-power computational algorithms can be successfully used for real-time physical activity monitoring and EE estimation on a wearable platform.

  20. Changes in tissue water and indentation resistance of lymphedematous limbs accompanying low level laser therapy (LLLT) of fibrotic skin.

    PubMed

    Mayrovitz, H N; Davey, S

    2011-12-01

    Our goal was to determine effects of low-level-laser-therapy (LLLT) on skin water and tissue indentation resistance (TIR) in patients with arm (N = 38) or leg (N = 38) lymphedema. Skin water was determined from tissue dielectric constant (TDC) measurements and TIR determined from measurements of force resulting from tissue indentations of 3-4 mm. A limb-location with fibrosis was identified by palpation and treated with an LLLT device for one minute at each of five points within a 3 cm2 area. TDC and TIR at these sites and corresponding sites on the contralateral limb were measured prior to LLLT (pre-LLLT), immediately after LLLT (post-LLLT) and after a manual lymphatic drainage (MLD) session (post-MLD). Results, from arms and legs, showed that post-LLLT values of TIR and TDC were significantly less than pre-LLLT. TIR values remained significantly reduced at post-MLD whereas TDC values were not significantly different from pre-LLLT values. On follow-up visit, 17 previously LLLT treated legs were sham treated with an inactive LLLT unit and measurements replicated. A TIR and TDC change-pattern similar to that obtained with the active LLLT was obtained, but sham-related reductions in TIR and TDC immediately post sham-treatment were significantly less than achieved with the prior active LLLT treatment.

  1. Longitudinal transvaginal ultrasound evaluation of cesarean scar niche incidence and depth in the first two years after single- or double-layer uterotomy closure: a randomized controlled trial.

    PubMed

    Bamberg, Christian; Hinkson, Larry; Dudenhausen, Joachim W; Bujak, Verena; Kalache, Karim D; Henrich, Wolfgang

    2017-12-01

    Cesarean deliveries are the most common abdominal surgery procedure globally, and the optimal way to suture the hysterotomy remains a matter of debate. The aim of this study was to assess the incidence of cesarean scar niches and the depth after single- or double-layer uterine closure. We performed a randomized controlled trial in which women were allocated to three uterotomy suture techniques: continuous single-layer unlocked, continuous locked single-layer, or double-layer sutures. Transvaginal ultrasound was performed six weeks and 6-24 months after cesarean delivery [Clinicaltrials.gov (NCT02338388)]. The study included 435 women. Six weeks after delivery, the incidence of niche was not significantly different between the groups (p = 0.52): 40% for single-layer unlocked, 32% for single-layer locked and 43% for double-layer sutures. The mean ± SD niche depths were 3.0 ± 1.4 mm for single-layer unlocked, 3.6 ± 1.7 mm for single-layer locked and 3.3 ± 1.3 mm for double-layer sutures (p = 1.0). There were no significant differences (p = 0.58) in niche incidence between the three groups at the second ultrasound follow up: 30% for single-layer unlocked, 23% for single-layer locked and 29% for double-layer sutures. The mean ± SD niche depth was 3.1 ± 1.5 mm after single-layer unlocked, 2.8 ± 1.5 mm after single-layer locked and 2.5 ± 1.2 mm after double-layer sutures (p = 0.61). There was a trend (p = 0.06) for the residual myometrium thickness to be thicker after double-layer repair at the long-term follow up. The incidence of cesarean scar niche formation and the niche depth was independent of the hysterotomy closure technique. © 2017 Nordic Federation of Societies of Obstetrics and Gynecology.

  2. True coronary bifurcation lesions: meta-analysis and review of literature.

    PubMed

    Athappan, Ganesh; Ponniah, Thirumalaikolundiusubramanian; Jeyaseelan, Lakshmanan

    2010-02-01

    Percutaneous intervention of true coronary bifurcation lesions is challenging. Based on the results of randomized trials and registry data, the approach of stenting of main vessel only with balloon dilatation of the side branch has become the default approach for false bifurcation lesions except when a complication occurs or in cases of suboptimal result. However, the optimal stenting strategy for true coronary bifurcation lesions - to stent or not to stent the side branch - is still a matter of debate. The purpose of this study was, therefore, to compare the clinical and angiographic outcomes of the double stent technique (stenting of the main branch and side branch) over the single stent technique (stenting of main vessel only with balloon dilatation of the side branch) for treatment of true coronary bifurcation lesions, with drug-eluting stents (DES). Comparative studies published between January 2000 and February 2009 of the double stent technique vs. single stent technique with DES for true coronary bifurcations were identified using an electronic search and reviewed using a random effects model. The primary endpoints of our study were side-branch and main-branch restenoses, all-cause mortality, myocardial infarction (MI) and target lesion revascularization (TLR) at longest available follow-up. The secondary endpoints of our analysis were postprocedural minimal luminal diameter (MLD) of the side branch and main branch, follow-up MLD of side branch and main branch and stent thrombosis. Heterogeneity was assessed and sensitivity analysis was performed to test the robustness of the overall summary odds ratios (ORs). Five studies comprising 1145 patients (616 single stent and 529 double stent) were included in the analysis. Three studies were randomized comparisons between the two techniques for true coronary bifurcation lesions. Incomplete reporting of data in the primary studies was common. The lengths of clinical and angiographic follow-up ranged between 6 and 12 months and 6 and 7 months, respectively. Postprocedural MLD of the side branch was significantly smaller in the single stent group [standardized mean difference (SMD) -0.71, 95% CI -0.88 to -0.54, P < 0.000, I2 = 0%]. The odds of side-branch restenosis (OR 1.11, 95% CI 0.47-2.67, P = 0.81, I2 = 76%), main-branch restenois (OR 0.88, 95% CI 0.56-1.39, P = 0.58, I = 0%), all-cause mortality (OR 0.52, 95% CI 0.11-2.45, P = 0.41, I2 = 0%), MI (OR 0.92, 95% CI 0.34-2.54, P = 0.87, I = 49%) and TLR (OR 0.87, 95% CI 0.46-1.65, P = 0.68, I2 = 0%) were similar between the two groups. Postprocedural MLD of the main branch [standardized mean difference (SMD) -0.08, 95% CI -0.42 to -0.26, P < 0.65, I2 = 67%], follow-up MLD of side branch (SMD -0.19, 95% CI -0.40 to 0.01, P < 0.31, I2 = 15%) and main branch MLD (SMD 0.17, 95% CI -0.18 to 0.542, P < 0.35, I2 = 65%) were also similar between the two groups. In patients undergoing percutaneous coronary intervention (PCI) for true coronary bifurcations, there is no added advantage of stenting both branches as compared with a conventional one-stent strategy. The results, however, need to be interpreted considering the poor study methods and/or poor quality of reporting in publications. We propose to move forward and consider the conduct of more systematic, well-designed and scientific trials to investigate the treatment of true coronary bifurcation lesions.

  3. Seismic Discontinuities beneath the Southwestern United States from S Receiver Functions

    NASA Astrophysics Data System (ADS)

    Akanbi, O. E.; Li, A.

    2015-12-01

    S- Receiver functions along the Colorado Plateau-Rio Grande Rift-Great Plains Transect known as La RISTRA in the southwestern United States have been utilized to map the Moho and lithosphere-asthenosphere boundary (LAB) beneath this tectonically active region. The receiver functions were stacked according to ray piercing points with moveout corrections in order to improve the signal-to-noise ratio of converted S-to-P phases. The Moho appears at 30-40 km beneath the Rio Grande Rift (RGR) and deepens to 35-45 km beneath the Great Plains (GP) and the Colorado Plateau (CP). A sharp discontinuity is observed along the profile with the average depth of 80 km beneath the RGR, 100 km beneath the GP, and 160 km beneath the CP. This discontinuity is consistent with the top of a low velocity zone in a shear wave model beneath the array and is interpreted as the LAB. Strong phases imaged at ~90 km beneath the CP and GP could be a combination of side-lobes of the Moho conversions and primary Sp phases from a mid-lithosphere discontinuity (MLD). The relatively shallow Moho and LAB beneath the Rio Grande Rift is indicative of lithosphere extension and asthenosphere upwarp. In addition, the LAB shows depth-step depressions at the RGR-CP and RGR-GP boundaries, providing evidence for mantle downwelling. The variation of the lithospheric depth across the RISTRA array supports that edge-driven, small-scale mantle convection is largely responsible for the recent extension and uplift in the Rio Grande Rift and the Colorado Plateau.

  4. SU-C-210-01: Are Clinically Relevant Dosimetric Endpoints Significantly Better with Gating of Lung SBRT Vs. ITV-Based Treatment?: Results of a Large Cohort Investigation Analyzing Predictive Dosimetric Indicators as a Function of Tumor Volume and Motion Amplitude

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kim, J; Zhao, B; Ajlouni, M

    2015-06-15

    Purpose: To quantitatively compare patient internal target volume (ITV)-based plans with retrospectively generated gated plans to evaluate potential dosimetric improvements in lung toxicity from gated radiotherapy. Methods: Evaluation was conducted for 150 stereotactic body radiation therapy (SBRT) treatment plans for 128 early-stage (T1–T3, <5cm) NSCLC patients. PTV margins were: ITV+5 mm (ITV-plan) and GTV+5 mm (Gated-plan). ITV-based and gated treatment plans were compared on the same free-breathing CT. ITV-based plan constraints were used to re-optimize and recalculate new gated plans. Plans were generated for 3 fractionation regimens: 3×18Gy, 4×12Gy (original), and 5×10Gy. Physical dose was converted to equivalent dose inmore » 2Gy fractions (EQD2), which was used to determine mean lung dose (MLD) and percent volume of lung receiving ≥20Gy (V20). MLD and V20 differences between gating and ITV-based plans were analyzed as a function of both three-dimensional (3D) motion and tumor volume. The low dose region, V5, was also evaluated. Results: MLD and V20 differences between gated and ITV-based plans were larger for lower (1.48±1.32Gy and 1.44±1.29%) than for upper lobe tumors (0.89±0.74Gy and 0.92±0.71%) due to smaller tumor motion (2.9±3.4mm) compared to lower lobe tumors (8.1±6.1mm). Average differences of <1–2% were noted in V5 between ITV and gated plans. Dosimetric differences between gating and ITV-based methods increased with increasing tumor motion and decreasing tumor volume. Overall, average MLD (8.04±3.92Gy) and V20 (8.29±4.33%) values for ITV-based plans were already well below clinical guidelines, even for the 3×18Gy dose scheme, for which largest differences were noted relative to gated plans. Similar results were obtained for 5×10Gy and 4×12Gy regimens. Conclusion: Clinically relevant improvement in pulmonary toxicity, based on predictors of radiation pneumonitis (MLD and V20) was not generally observed, though improvement for tumors with 3D motion >15 mm, mainly concentrated in peripheral lower lobe tumors, may be considered clinically relevant. Work supported in part by a grant from Varian Medical systems, Palo Alto, CA.« less

  5. Wetting-layer formation mechanisms of surface-directed phase separation under different quench depths with off-critical compositions in polymer binary mixture

    NASA Astrophysics Data System (ADS)

    Yan, Li-Tang; Xie, Xu-Ming

    2007-02-01

    Focusing on the off-critical condition, the quench depth dependence of surface-directed phase separation in the polymer binary mixture is numerically investigated by combination of the Cahn-Hilliard-Cook theory and the Flory-Huggins-de Gennes theory. Two distinct situations, i.e., for the wetting, the minority component is preferred by the surface and the majority component is preferred by the surface, are discussed in detail. The simulated results show that the formation mechanism of the wetting layer is affected by both the quench depth and the off-critical extent. Moreover, a diagram, illustrating the formation mechanisms of the wetting layer with various quench depths and compositions, is obtained on the basis of the simulated results. It is found that, when the minority component is preferred by the surface, the growth of the wetting layer can exhibit pure diffusion limited growth law, logarithmic growth law, and Lifshitz-Slyozov growth law. However, when the majority component is preferred by the surface, the wetting layer always grows logarithmically, regardless of the quench depth and the off-critical extent. It is interesting that the surface-induced nucleation can be observed in this case. The simulated results demonstrate that the surface-induced nucleation only occurs below a certain value of the quench depth, and a detailed range about it is calculated and indicated. Furthermore, the formation mechanisms of the wetting layer are theoretically analyzed in depth by the chemical potential gradient.

  6. The influence of the depth of k-core layers on the robustness of interdependent networks against cascading failures

    NASA Astrophysics Data System (ADS)

    Dong, Zhengcheng; Fang, Yanjun; Tian, Meng; Kong, Zhengmin

    The hierarchical structure, k-core, is common in various complex networks, and the actual network always has successive layers from 1-core layer (the peripheral layer) to km-core layer (the core layer). The nodes within the core layer have been proved to be the most influential spreaders, but there is few work about how the depth of k-core layers (the value of km) can affect the robustness against cascading failures, rather than the interdependent networks. First, following the preferential attachment, a novel method is proposed to generate the scale-free network with successive k-core layers (KCBA network), and the KCBA network is validated more realistic than the traditional BA network. Then, with KCBA interdependent networks, the effect of the depth of k-core layers is investigated. Considering the load-based model, the loss of capacity on nodes is adopted to quantify the robustness instead of the number of functional nodes in the end. We conduct two attacking strategies, i.e. the RO-attack (Randomly remove only one node) and the RF-attack (Randomly remove a fraction of nodes). Results show that the robustness of KCBA networks not only depends on the depth of k-core layers, but also is slightly influenced by the initial load. With RO-attack, the networks with less k-core layers are more robust when the initial load is small. With RF-attack, the robustness improves with small km, but the improvement is getting weaker with the increment of the initial load. In a word, the lower the depth is, the more robust the networks will be.

  7. Soda Intake Is Directly Associated with Serum C-Reactive Protein Concentration in Mexican Women.

    PubMed

    Tamez, Martha; Monge, Adriana; López-Ridaura, Ruy; Fagherazzi, Guy; Rinaldi, Sabina; Ortiz-Panozo, Eduardo; Yunes, Elsa; Romieu, Isabelle; Lajous, Martin

    2018-01-01

    Soda intake is associated with an increased risk of cardiovascular disease. Consumption of diet sodas, often considered healthy alternatives to sodas, could also increase the likelihood of cardiovascular outcomes. This study aims to evaluate the relation between soda and diet soda and biomarkers of cardiovascular risk. We conducted a cross-sectional analysis among 825 Mexican women free of diabetes, cardiovascular disease, and cancer, and for whom serum concentrations of C-reactive protein (CRP), C-peptide, adiponectin, and leptin were available. Mean ± SD age was 45.9 ± 6.6 y, the majority of women were premenopausal (60.4%), and the prevalence of obesity was 35%. We estimated the adjusted percentage differences in biomarkers and 95% CIs by performing multiple linear regression models comparing categories of consumption for soda and diet soda adjusting for age, family history of heart disease, menopause, menopausal hormone therapy, socioeconomic status, region, smoking, physical activity, alcohol intake, and dietary patterns. In the entire study sample we observed a 50% higher serum CRP concentration in women in the highest soda intake quartile (median intake: 202.9 mL/d, IQR: 101.4, 304.3 mL/d) compared to those in the lowest (median intake: 11.8 mL/d, IQR: 0.0, 152.1 mL/d). After stratification by menopausal status, results remained significant only for premenopausal women. Premenopausal women in the highest quartile of soda intake had 56% higher CRP concentration relative to women in the lowest quartile. We observed no significant association with the other biomarkers. After further adjustment for body mass index, a potential mediator, results remained significant only for CRP. Diet soda consumption was not associated with any of the biomarkers. Consumption of soda was associated with adverse levels in a biomarker of inflammation and cardiovascular risk, serum CRP, in Mexican women. These results add to the accumulating evidence on soda and cardiovascular risk. More research is necessary to understand the potential impact of artificially sweetened sodas. © 2018 American Society for Nutrition. All rights reserved.

  8. Influence of manual lymphatic drainage on health-related quality of life and symptoms of chronic venous insufficiency: a randomized controlled trial.

    PubMed

    dos Santos Crisóstomo, Rute Sofia; Costa, Daniela Sofia Albino; de Luz Belo Martins, Catarina; Fernandes, Tânia Isabel Russo; Armada-da-Silva, Paulo A

    2015-02-01

    To evaluate the efficacy of manual lymphatic drainage (MLD) in improving health-related quality of life (HRQOL), symptomatology, and physical status in patients with chronic venous insufficiency (CVI). Single-blind randomized controlled trial. Health community attendant service. Subjects with CVI (N=41) were randomly assigned to an experimental group (n=20; mean age, 54.6±11.3y) or control group (n=21; mean age, 46.8±11.1y). The experimental group completed 10 lower extremity MLD sessions over 4 weeks and 1 educational session. The control group only attended the educational session. Outcome measures were taken at baseline (t0), at the end of 4 weeks (t1), and after 2 months for follow-up (t2). HRQOL was assessed with the Chronic Venous Insufficiency Quality of Life Questionnaire-20, symptoms (fatigue, heaviness) were assessed with a visual analog scale, severity of the disease was assessed with the Venous Clinical Severity Score (VCSS) (total score, score for each item), leg volumetry was assessed with perimeters, and plantar/dorsiflexion strength and ankle range of motion (ROM) were assessed with dynamometry. A significant interaction group×time effect was found for pain on HRQOL (F2,78=3.507; P=.035; partial η2=.087), clinical severity (F2,78=5.231; P=.007; partial η2=.118), especially for venous edema (assessed with the VCSS), fatigue (F1.67,65.21=4.690; P=.012; partial η2=.107), and heaviness (F1.57,61.32=9.702; P=.001; partial η2=.199), with the experimental group improving from t0 to t1 and t0 to t2 in all of these outcomes. No effect of MLD treatment could be found for ankle muscle strength, ankle ROM, and leg volume. Short-term MLD treatment ameliorates CVI severity and related edema, symptoms, and pain HRQOL in patients with CVI. Copyright © 2015 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

  9. SU-F-J-138: An Extension of PCA-Based Respiratory Deformation Modeling Via Multi-Linear Decomposition

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Iliopoulos, AS; Sun, X; Pitsianis, N

    Purpose: To address and lift the limited degree of freedom (DoF) of globally bilinear motion components such as those based on principal components analysis (PCA), for encoding and modeling volumetric deformation motion. Methods: We provide a systematic approach to obtaining a multi-linear decomposition (MLD) and associated motion model from deformation vector field (DVF) data. We had previously introduced MLD for capturing multi-way relationships between DVF variables, without being restricted by the bilinear component format of PCA-based models. PCA-based modeling is commonly used for encoding patient-specific deformation as per planning 4D-CT images, and aiding on-board motion estimation during radiotherapy. However, themore » bilinear space-time decomposition inherently limits the DoF of such models by the small number of respiratory phases. While this limit is not reached in model studies using analytical or digital phantoms with low-rank motion, it compromises modeling power in the presence of relative motion, asymmetries and hysteresis, etc, which are often observed in patient data. Specifically, a low-DoF model will spuriously couple incoherent motion components, compromising its adaptability to on-board deformation changes. By the multi-linear format of extracted motion components, MLD-based models can encode higher-DoF deformation structure. Results: We conduct mathematical and experimental comparisons between PCA- and MLD-based models. A set of temporally-sampled analytical trajectories provides a synthetic, high-rank DVF; trajectories correspond to respiratory and cardiac motion factors, including different relative frequencies and spatial variations. Additionally, a digital XCAT phantom is used to simulate a lung lesion deforming incoherently with respect to the body, which adheres to a simple respiratory trend. In both cases, coupling of incoherent motion components due to a low model DoF is clearly demonstrated. Conclusion: Multi-linear decomposition can enable decoupling of distinct motion factors in high-rank DVF measurements. This may improve motion model expressiveness and adaptability to on-board deformation, aiding model-based image reconstruction for target verification. NIH Grant No. R01-184173.« less

  10. Association between absolute volumes of lung spared from low-dose irradiation and radiation-induced lung injury after intensity-modulated radiotherapy in lung cancer: a retrospective analysis.

    PubMed

    Chen, Jinmei; Hong, Jinsheng; Zou, Xi; Lv, Wenlong; Guo, Feibao; Hong, Hualan; Zhang, Weijian

    2015-11-01

    The aim of this study was to investigate the association between absolute volumes of lung spared from low-dose irradiation and radiation-induced lung injury (RILI) after intensity-modulated radiotherapy (IMRT) for lung cancer. The normal lung relative volumes receiving greater than 5, 10, 20 and 30 Gy (V5-30) mean lung dose (MLD), and absolute volumes spared from greater than 5, 10, 20 and 30 Gy (AVS5-30) for the bilateral and ipsilateral lungs of 83 patients were recorded. Any association of clinical factors and dose-volume parameters with Grade ≥2 RILI was analyzed. The median follow-up was 12.3 months; 18 (21.7%) cases of Grade 2 RILI, seven (8.4%) of Grade 3 and two (2.4%) of Grade 4 were observed. Univariate analysis revealed the located lobe of the primary tumor. V5, V10, V20, MLD of the ipsilateral lung, V5, V10, V20, V30 and MLD of the bilateral lung, and AVS5 and AVS10 of the ipsilateral lung were associated with Grade ≥2 RILI (P < 0.05). Multivariate analysis indicated AVS5 of the ipsilateral lung was prognostic for Grade ≥2 RILI (P = 0.010, OR = 0.272, 95% CI: 0.102-0.729). Receiver operating characteristic curves indicated Grade ≥2 RILI could be predicted using AVS5 of the ipsilateral lung (area under curve, 0.668; cutoff value, 564.9 cm(3); sensitivity, 60.7%; specificity, 70.4%). The incidence of Grade ≥2 RILI was significantly lower with AVS5 of the ipsilateral lung ≥564.9 cm(3) than with AVS5 < 564.9 cm(3) (P = 0.008). Low-dose irradiation relative volumes and MLD of the bilateral or ipsilateral lung were associated with Grade ≥2 RILI, and AVS5 of the ipsilateral lung was prognostic for Grade ≥2 RILI for lung cancer after IMRT. © The Author 2015. Published by Oxford University Press on behalf of The Japan Radiation Research Society and Japanese Society for Radiation Oncology.

  11. Depth Profiling Analysis of Aluminum Oxidation During Film Deposition in a Conventional High Vacuum System

    NASA Technical Reports Server (NTRS)

    Kim, Jongmin; Weimer, Jeffrey J.; Zukic, Muamer; Torr, Douglas G.

    1994-01-01

    The oxidation of aluminum thin films deposited in a conventional high vacuum chamber has been investigated using x-ray photoelectron spectroscopy (XPS) and depth profiling. The state of the Al layer was preserved by coating it with a protective MgF2 layer in the deposition chamber. Oxygen concentrations in the film layers were determined as a function of sputter time (depth into the film). The results show that an oxidized layer is formed at the start of Al deposition and that a less extensively oxidized Al layer is deposited if the deposition rate is fast. The top surface of the Al layer oxidizes very quickly. This top oxidized layer may be thicker than has been previously reported by optical methods. Maximum oxygen concentrations measured by XPS at each Al interface are related to pressure to rate ratios determined during the Al layer deposition.

  12. Observations of Strong Surface Radar Ducts over the Persian Gulf.

    NASA Astrophysics Data System (ADS)

    Brooks, Ian M.; Goroch, Andreas K.; Rogers, David P.

    1999-09-01

    Ducting of microwave radiation is a common phenomenon over the oceans. The height and strength of the duct are controlling factors for radar propagation and must be determined accurately to assess propagation ranges. A surface evaporation duct commonly forms due to the large gradient in specific humidity just above the sea surface; a deeper surface-based or elevated duct frequently is associated with the sudden change in temperature and humidity across the boundary layer inversion.In April 1996 the U.K. Meteorological Office C-130 Hercules research aircraft took part in the U.S. Navy Ship Antisubmarine Warfare Readiness/Effectiveness Measuring exercise (SHAREM-115) in the Persian Gulf by providing meteorological support and making measurements for the study of electromagnetic and electro-optical propagation. The boundary layer structure over the Gulf is influenced strongly by the surrounding desert landmass. Warm dry air flows from the desert over the cooler waters of the Gulf. Heat loss to the surface results in the formation of a stable internal boundary layer. The layer evolves continuously along wind, eventually forming a new marine atmospheric boundary layer. The stable stratification suppresses vertical mixing, trapping moisture within the layer and leading to an increase in refractive index and the formation of a strong boundary layer duct. A surface evaporation duct coexists with the boundary layer duct.In this paper the authors present aircraft- and ship-based observations of both the surface evaporation and boundary layer ducts. A series of sawtooth aircraft profiles map the boundary layer structure and provide spatially distributed estimates of the duct depth. The boundary layer duct is found to have considerable spatial variability in both depth and strength, and to evolve along wind over distances significant to naval operations (100 km). The depth of the evaporation duct is derived from a bulk parameterization based on Monin-Obukhov similarity theory using near-surface data taken by the C-130 during low-level (30 m) flight legs and by ship-based instrumentation. Good agreement is found between the two datasets. The estimated evaporation ducts are found to be generally uniform in depth; however, localized regions of greatly increased depth are observed on one day, and a marked change in boundary layer structure resulting in merging of the surface evaporation duct with the deeper boundary layer duct was observed on another. Both of these cases occurred within exceptionally shallow boundary layers (100 m), where the mean evaporation duct depths were estimated to be between 12 and 17 m. On the remaining three days the boundary layer depth was between 200 and 300 m, and evaporation duct depths were estimated to be between 20 and 35 m, varying by just a few meters over ranges of up to 200 km.The one-way radar propagation factor is modeled for a case with a pronounced change in duct depth. The case is modeled first with a series of measured profiles to define as accurately as possible the refractivity structure of the boundary layer, then with a single profile collocated with the radar antenna and assuming homogeneity. The results reveal large errors in the propagation factor when derived from a single profile.

  13. Classification of permafrost active layer depth from remotely sensed and topographic evidence

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Peddle, D.R.; Franklin, S.E.

    1993-04-01

    The remote detection of permafrost (perennially frozen ground) has important implications to environmental resource development, engineering studies, natural hazard prediction, and climate change research. In this study, the authors present results from two experiments into the classification of permafrost active layer depth within the zone of discontinuous permafrost in northern Canada. A new software system based on evidential reasoning was implemented to permit the integrated classification of multisource data consisting of landcover, terrain aspect, and equivalent latitude, each of which possessed different formats, data types, or statistical properties that could not be handled by conventional classification algorithms available to thismore » study. In the first experiment, four active layer depth classes were classified using ground based measurements of the three variables with an accuracy of 83% compared to in situ soil probe determination of permafrost active layer depth at over 500 field sites. This confirmed the environmental significance of the variables selected, and provided a baseline result to which a remote sensing classification could be compared. In the second experiment, evidence for each input variable was obtained from image processing of digital SPOT imagery and a photogrammetric digital elevation model, and used to classify active layer depth with an accuracy of 79%. These results suggest the classification of evidence from remotely sensed measures of spectral response and topography may provide suitable indicators of permafrost active layer depth.« less

  14. Enhanced nutrient transport improves the depth-dependent properties of tri-layered engineered cartilage constructs with zonal co-culture of chondrocytes and MSCs.

    PubMed

    Kim, Minwook; Farrell, Megan J; Steinberg, David R; Burdick, Jason A; Mauck, Robert L

    2017-08-01

    Biomimetic design in cartilage tissue engineering is a challenge given the complexity of the native tissue. While numerous studies have generated constructs with near-native bulk properties, recapitulating the depth-dependent features of native tissue remains a challenge. Furthermore, limitations in nutrient transport and matrix accumulation in engineered constructs hinders maturation within the central core of large constructs. To overcome these limitations, we fabricated tri-layered constructs that recapitulate the depth-dependent cellular organization and functional properties of native tissue using zonally derived chondrocytes co-cultured with MSCs. We also introduced porous hollow fibers (HFs) and HFs/cotton threads to enhance nutrient transport. Our results showed that tri-layered constructs with depth-dependent organization and properties could be fabricated. The addition of HFs or HFs/threads improved matrix accumulation in the central core region. With HF/threads, the local modulus in the deep region of tri-layered constructs nearly matched that of native tissue, though the properties in the central regions remained lower. These constructs reproduced the zonal organization and depth-dependent properties of native tissue, and demonstrate that a layer-by-layer fabrication scheme holds promise for the biomimetic repair of focal cartilage defects. Articular cartilage is a highly organized tissue driven by zonal heterogeneity of cells, extracellular matrix proteins and fibril orientations, resulting in depth-dependent mechanical properties. Therefore, the recapitulation of the functional properties of native cartilage in a tissue engineered construct requires such a biomimetic design of the morphological organization, and this has remained a challenge in cartilage tissue engineering. This study demonstrates that a layer-by-layer fabrication scheme, including co-cultures of zone-specific articular CHs and MSCs, can reproduce the depth-dependent characteristics and mechanical properties of native cartilage while minimizing the need for large numbers of chondrocytes. In addition, introduction of a porous hollow fiber (combined with a cotton thread) enhanced nutrient transport and depth-dependent properties of the tri-layered construct. Such a tri-layered construct may provide critical advantages for focal cartilage repair. These constructs hold promise for restoring native tissue structure and function, and may be beneficial in terms of zone-to-zone integration with adjacent host tissue and providing more appropriate strain transfer after implantation. Copyright © 2017 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.

  15. Neurological outcomes after hematopoietic stem cell transplantation for cerebral X-linked adrenoleukodystrophy, late onset metachromatic leukodystrophy and Hurler syndrome.

    PubMed

    Saute, Jonas Alex Morales; Souza, Carolina Fischinger Moura de; Poswar, Fabiano de Oliveira; Donis, Karina Carvalho; Campos, Lillian Gonçalves; Deyl, Adriana Vanessa Santini; Burin, Maira Graeff; Vargas, Carmen Regla; Matte, Ursula da Silveira; Giugliani, Roberto; Saraiva-Pereira, Maria Luiza; Vedolin, Leonardo Modesti; Gregianin, Lauro José; Jardim, Laura Bannach

    2016-12-01

    To describe survival and neurological outcomes after HSCT for these disorders. Seven CALD, 2 MLD and 2 MPS-IH patients underwent HSCT between 2007 and 2014. Neurological examinations, magnetic resonance imaging, molecular and biochemical studies were obtained at baseline and repeated when appropriated. Favorable outcomes were obtained with 4/5 related and 3/6 unrelated donors. Two patients died from procedure-related complications. Nine transplanted patients were alive after a median of 3.7 years: neurological stabilization was obtained in 5/6 CALD, 1/2 MLD, and one MPS-IH patient. Brain lesions of the MPS-IH patient were reduced four years after HSCT. Good outcomes were obtained when HSCT was performed before adulthood, early in the clinical course, and/or from a related donor.

  16. Kinetics of the immune response to the (F1+V) vaccine in models of bubonic and pneumonic plague.

    PubMed

    Williamson, E D; Stagg, A J; Eley, S M; Taylor, R; Green, M; Jones, S M; Titball, R W

    2007-01-22

    Protection against aerosol challenge with > 300 MLD of Yersinia pestis was observed 7 days after a single immunisation of mice with the F1+V vaccine. At day 60, mice were protected against injected challenge (10(7)MLD) in a vaccine dose-related manner. Recall responses to rV in splenocytes ex vivo at day 98 correlated significantly (p<0.001) with the immunising dose-level of V antigen; no memory response or anti-V serum IgG was detected in killed whole cell vaccine (KWCV) recipients. This may explain the susceptibility of KWCV recipients to aerosol challenge and the enhanced protection conferred by the F1+V sub-unit vaccine, particularly since the anti-F1 responses induced by either vaccine were similarly IgG1-polarised.

  17. Effects of Erythropoiesis-stimulating Agents on Intestinal Flora in Peritoneal Fibrosis.

    PubMed

    Bilici, Muammer; Oz, Ibrahim Ilker; Uygun Ilikhan, Sevil; Borazan, Ali

    2017-05-01

    This study aimed to investigate the effects of erythropoiesis-stimulating agents (ESAs) on intestinal flora in peritoneal fibrosis. Twenty-four Wistar albino rats were divided into 3 groups as the control group, which received 0.9% saline (3 mL/d) intraperitoneally; the chlorhexidine gluconate (CH) group, which received 3 mL/d injections of 0.1% CH intraperitoneally, and the ESA group, which received 3 mL/d injections of 0.1% CH intraperitoneally and epoetin beta (3 doses of 20 IU/kg/wk) subcutaneously. On the 21st day, the rats were sacrificed and the visceral peritoneum samples were obtained from left liver bowel. Blood samples were obtained from abdominal aorta and intestinal flora samples were obtained from transverse colon. Histopathologically, the CH, ESA, and control groups had peritoneal thickness of 135.4 ± 22.2 µm, 48.6 ± 12.8 µm, and 6.0 ± 2.3 µm, respectively. Escherichia coli was the predominant bacterium in the intestinal flora in the control group. Significant changes in microbial composition of intestinal flora towards Proteus species and Enterobacter species was seen among the groups (P < .001). There was no significant difference between the ESA and CH groups regarding the isolates from blood cultures. However, the bacterial isolates from cultures of intestinal flora among these groups were significantly different (P < .05). Erythropoiesis-stimulating agents change intestinal flora by a clinically significant amount in experimental peritoneal fibrosis. We consider that ESAs achieve this via regulating intestinal peristaltism.

  18. Kinetics and thermodynamics of ethanol production by Saccharomyces cerevisiae MLD10 using molasses.

    PubMed

    Arshad, Muhammad; Ahmed, Sibtain; Zia, Muhammad Anjum; Rajoka, Muhammad Ibrahim

    2014-03-01

    In this study, we have used ultraviolet (UV) and γ-ray induction to get a catabolite repression resistant and thermotolerant mutant with enhanced ethanol production along with optimization of sugar concentration and temperature of fermentation. Classical mutagenesis in two consecutive cycles of UV- and γ-ray-induced mutations evolved one best catabolite-resistant and thermotolerant mutant Saccharomyces cerevisiae MLD10 which showed improved ethanol yield (0.48 ± 0.02 g g(-1)), theoretical yield (93 ± 3%), and extracellular invertase productivity (1,430 ± 50 IU l(-1) h(-1)), respectively, when fermenting 180 g sugars l(-1) in molasses medium at 43 °C in 300 m(3) working volume fermenter. Ethanol production was highly dependent on invertase production. Enthalpy (ΔH*) (32.27 kJ M(-1)) and entropy (ΔS*) (-202.88 J M(-1) K(-1)) values at 43 °C by the mutant MLD10 were significantly lower than those of β-glucosidase production by a thermophilic mutant derivative of Thermomyces lanuginosus. These results confirmed the enhanced production of ethanol and invertase by this mutant derivative. These studies proved that mutant was significantly improved for ethanol production and was thermostable in nature. Lower fermentation time for ethanol production and maintenance of ethanol production rates (3.1 g l(-1) h(-1)) at higher temperature (43 °C) by this mutant could decrease the overall cost of fermentation process and increase the quality of ethanol production.

  19. Comparison of the antiviral potential among soluble forms of herpes simplex virus type-2 glycoprotein D receptors, herpes virus entry mediator A, nectin-1 and nectin-2, in transgenic mice.

    PubMed

    Fujimoto, Yoshikazu; Tomioka, Yukiko; Ozaki, Kinuyo; Takeda, Keiko; Suyama, Haruka; Yamamoto, Sayo; Takakuwa, Hiroki; Morimatsu, Masami; Uede, Toshimitsu; Ono, Etsuro

    2017-07-01

    Herpesvirus entry mediator A (HVEM), nectin-1 and nectin-2 are cellular receptors of glycoprotein D (gD) of herpes simplex virus type-2 (HSV-2). It has been shown that soluble forms of HSV gD receptors have the antiviral potential in cultured cells and transgenic mice. Here, to compare antiviral potential of soluble forms of HVEM, nectin-1 and nectin-2 against HSV-2 infections in vivo, transgenic mice expressing fusion proteins consisting of the entire ectodomain of HVEM, nectin-1 or nectin-2 and the Fc portion of human IgG (HVEMIg, nectin-1Ig and nectin-2Ig, respectively) were intraperitoneally infected with HSV-2. In the infection with 3 MLD50 (50 % mouse lethal dose), effective resistance was not observed in transgenic mice expressing nectin-2Ig. In a transgenic mouse line with high expression of nectin-1Ig, significant protection from the infection with 30 and 300 MLD50 was observed (survival rate of 100 and 71 %, respectively). On the other hand, transgenic mice expressing HVEMIg showed a complete resistance to the lethal infection even with 300 MLD50 (survival rate of 100 %). These results demonstrated that HVEMIg could exert effective antiviral activities against HSV-2 infections in vivo as compared with other soluble forms of HSV gD receptors.

  20. To Find a Better Dosimetric Parameter in the Predicting of Radiation-Induced Lung Toxicity Individually: Ventilation, Perfusion or CT based.

    PubMed

    Xiao, Lin-Lin; Yang, Guoren; Chen, Jinhu; Wang, Xiaohui; Wu, Qingwei; Huo, Zongwei; Yu, Qingxi; Yu, Jinming; Yuan, Shuanghu

    2017-03-15

    This study aimed to find a better dosimetric parameter in predicting of radiation-induced lung toxicity (RILT) in patients with non-small cell lung cancer (NSCLC) individually: ventilation(V), perfusion (Q) or computerized tomography (CT) based. V/Q single-photon emission computerized tomography (SPECT) was performed within 1 week prior to radiotherapy (RT). All V/Q imaging data was integrated into RT planning system, generating functional parameters based on V/Q SPECT. Fifty-seven NSCLC patients were enrolled in this prospective study. Fifteen (26.3%) patients underwent grade ≥2 RILT, the remaining forty-two (73.7%) patients didn't. Q-MLD, Q-V20, V-MLD, V-V20 of functional parameters correlated more significantly with the occurrence of RILT compared to V20, MLD of anatomical parameters (r = 0.630; r = 0.644; r = 0.617; r = 0.651 vs. r = 0.424; r = 0.520 p < 0.05, respectively). In patients with chronic obstructive pulmonary diseases (COPD), V functional parameters reflected significant advantage in predicting RILT; while in patients without COPD, Q functional parameters reflected significant advantage. Analogous results were existed in fractimal analysis of global pulmonary function test (PFT). In patients with central-type NSCLC, V parameters were better than Q parameters; while in patients with peripheral-type NSCLC, the results were inverse. Therefore, this study demonstrated that choosing a suitable dosimetric parameter individually can help us predict RILT accurately.

  1. Effect of Physical Methods of Lymphatic Drainage on Postexercise Recovery of Mixed Martial Arts Athletes.

    PubMed

    Zebrowska, Aleksandra; Trybulski, Robert; Roczniok, Robert; Marcol, Wieslaw

    2017-08-16

    Physical methods are reported to be important for accelerating skeletal muscle regeneration, decreasing muscle soreness, and shortening of the recovery time. The aim of the study was to assess the effect of the physical methods of lymphatic drainage (PMLD) such as manual lymphatic drainage (MLD), the Bodyflow (BF) therapy, and lymphatic drainage by deep oscillation (DO) on postexercise regeneration of the forearm muscles of mixed martial arts (MMA) athletes. Eighty MMA athletes aged 27.5 ± 6.4 years were allocated to 4 groups: MLD, the BF device, DO therapy, and the control group. Blood flow velocity in the cephalic vein was measured with the ultrasound Doppler velocity meter. Maximal strength of the forearm muscles (Fmax), muscle tissue tension, pain threshold, blood lactate concentration (LA), and activity of creatine kinase were measured in all groups at rest, after the muscle fatigue test (post-ex) and then 20 minutes, 24, and 48 hours after the application of PMLD. The muscle fatigue test reduced Fmax in all subjects, but in the groups receiving MLD, DO, and BF significantly higher Fmax was observed at recovery compared with post-ex values. The application of MDL reduced the postexercise blood LA and postexercise muscle tension. The lymphatic drainage methods, whether manual or using electro-stimulation and DO, improve postexercise regeneration of the forearm muscles of MMA athletes. The methods can be an important element of therapeutic management focused on optimizing training effects and reducing the risk of injuries of the combat sports athletes.

  2. Long-Wavelength Instability in Marangoni Convection

    NASA Technical Reports Server (NTRS)

    VanHook, Stephen J.; Schatz, Michael F.; Swift, Jack B.; McCormick, W. D.; Swinney, Harry L.

    1996-01-01

    Our experiments in thin liquid layers (approximately 0.1 mm thick) heated from below reveal a well-defined long-wavelength instability: at a critical temperature difference across the layer, the depth of the layer in the center of the cell spontaneously decreases until the liquid-air interface ruptures and a dry spot forms. The onset of this critical instability occurs at a temperature difference across the liquid layer that is 35% smaller than that predicted in earlier theoretical studies of a single layer model. Our analysis of a two-layer model yields predictions in accord with the observations for liquid layer depths greater than or equal to 0.15 mm, but for smaller depths there is an increasing difference between our predictions and observations (the difference is 25% for a layer 0.06 mm thick). In microgravity environments the long-wavelength instability observed in our terrestrial experiments is expected to replace cellular convection as the primary instability in thick as well as thin liquid layers heated quasistatically from below.

  3. The Acoustic Model Evaluation Committee (AMEC) Reports. Volume 1A. Summary of Range Independent Environment Acoustic Propagation Data Sets

    DTIC Science & Technology

    1982-09-01

    experiment were: isothermal layer depth 36 ft depressed channel axis 66 ft surface water temperature 59.4 F sea state 2 Discussion The propagation loss...experiments were: isothermal layer depths 56 ft surface water temperature 59.7 0F - sea state 1 Discussion The propagation loss measurements are summarized...number of observations 1854 isothermal layer depth 33 ft surface water temperature 59.9°F sea state 2 Discussion The propagation loss measurements

  4. Investigation of wintertime cold-air pools and aerosol layers in the Salt Lake Valley using a lidar ceilometer

    NASA Astrophysics Data System (ADS)

    Young, Joseph Swyler

    This thesis investigates the utility of lidar ceilometers, a type of aerosol lidar, in improving the understanding of meteorology and air quality in persistent wintertime stable boundary layers, or cold-air pools, that form in urbanized valley and basin topography. This thesis reviews the scientific literature to survey the present knowledge of persistent cold-air pools, the operating principles of lidar ceilometers, and their demonstrated utility in meteorological investigations. Lidar ceilometer data from the Persistent Cold-Air Pool Study (PCAPS) are then used with meteorological and air quality data from other in situ and remote sensing equipment to investigate cold-air pools that formed in Utah's Salt Lake Valley during the winter of 2010-2011. The lidar ceilometer is shown to accurately measure aerosol layer depth and aerosol loading, when compared to visual observations. A linear relationship is found between low-level lidar backscatter and surface particulate measurements. Convective boundary layer lidar analysis techniques applied to cold-air pool ceilometer profiles can detect useful layer characteristics. Fine-scale waves are observed and analyzed within the aerosol layer, with emphasis on Kelvin-Helmholz waves. Ceilometer aerosol backscatter profiles are analyzed to quantify and describe mixing processes in persistent cold-air pools. Overlays of other remote and in-situ observations are combined with ceilometer particle backscatter to describe specific events during PCAPS. This analysis describes the relationship between the aerosol layer and the valley inversion as well as interactions with large-scale meteorology. The ceilometer observations of hydrometers are used to quantify cloudiness and precipitation during the project, observing that 50% of hours when a PCAP was present had clouds or precipitation below 5 km above ground level (AGL). Then, combining an objective technique for determining hourly aerosol layer depths and correcting this subjectively during periods with low clouds or precipitation, a time series of aerosol depths was obtained. The mean depth of the surface-based aerosol layer during PCAP events was 1861 m MSL with a standard deviation of 135 m. The aerosol layer depth, given the approximate 1300 m altitude of the valley floor, is thus about 550 m, about 46% of the basin depth. The aerosol layer is present during much of the winter and is removed only during strong or prolonged precipitation periods or when surface winds are strong. Nocturnal fogs that formed near the end of high-stability PCAP episodes had a limited effect on aerosol layer depth. Aerosol layer depth was relatively invariant during the winter and during the persistent cold-air pools, while PM10 concentrations at the valley floor varied with bulk atmospheric stability associated primarily with passage of large-scale high- and low-pressure weather systems. PM10 concentrations also increased with cold-air pool duration. Mean aerosol loading in the surface-based aerosol layer, as determined from ceilometer backscatter coefficients, showed weaker variations than those of surface PM10 concentrations, suggesting that ineffective vertical mixing and aerosol layering are present in the cold-air pools. This is supported by higher time-resolution backscatter data, and it distinguishes the persistent cold-air pools from well-mixed convective boundary layers where ground-based air pollution concentrations are closely related to time-dependent convective boundary layer/aerosol depths. These results are discussed along with recommendations for future explorations of the ceilometer and cold-air pool topics.

  5. Southern Ocean Mixed-Layer Seasonal and Interannual Variations From Combined Satellite and In Situ Data

    NASA Astrophysics Data System (ADS)

    Buongiorno Nardelli, B.; Guinehut, S.; Verbrugge, N.; Cotroneo, Y.; Zambianchi, E.; Iudicone, D.

    2017-12-01

    The depth of the upper ocean mixed layer provides fundamental information on the amount of seawater that directly interacts with the atmosphere. Its space-time variability modulates water mass formation and carbon sequestration processes related to both the physical and biological pumps. These processes are particularly relevant in the Southern Ocean, where surface mixed-layer depth estimates are generally obtained either as climatological fields derived from in situ observations or through numerical simulations. Here we demonstrate that weekly observation-based reconstructions can be used to describe the variations of the mixed-layer depth in the upper ocean over a range of space and time scales. We compare and validate four different products obtained by combining satellite measurements of the sea surface temperature, salinity, and dynamic topography and in situ Argo profiles. We also compute an ensemble mean and use the corresponding spread to estimate mixed-layer depth uncertainties and to identify the more reliable products. The analysis points out the advantage of synergistic approaches that include in input the sea surface salinity observations obtained through a multivariate optimal interpolation. Corresponding data allow to assess mixed-layer depth seasonal and interannual variability. Specifically, the maximum correlations between mixed-layer anomalies and the Southern Annular Mode are found at different time lags, related to distinct summer/winter responses in the Antarctic Intermediate Water and Sub-Antarctic Mode Waters main formation areas.

  6. Surface boundary layer turbulence in the Southern ocean

    NASA Astrophysics Data System (ADS)

    Merrifield, Sophia; St. Laurent, Louis; Owens, Breck; Naveira Garabato, Alberto

    2015-04-01

    Due to the remote location and harsh conditions, few direct measurements of turbulence have been collected in the Southern Ocean. This region experiences some of the strongest wind forcing of the global ocean, leading to large inertial energy input. While mixed layers are known to have a strong seasonality and reach 500m depth, the depth structure of near-surface turbulent dissipation and diffusivity have not been examined using direct measurements. We present data collected during the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES) field program. In a range of wind conditions, the wave affected surface layer (WASL), where surface wave physics are actively forcing turbulence, is contained to the upper 15-20m. The lag-correlation between wind stress and turbulence shows a strong relationship up to 6 hours (˜1/2 inertial period), with the winds leading the oceanic turbulent response, in the depth range between 20-50m. We find the following characterize the data: i) Profiles that have a well-defined hydrographic mixed layer show that dissipation decays in the mixed layer inversely with depth, ii) WASLs are typically 15 meters deep and 30% of mixed layer depth, iii) Subject to strong winds, the value of dissipation as a function of depth is significantly lower than predicted by theory. Many dynamical processes are known to be missing from upper-ocean parameterizations of mixing in global models. These include surface-wave driven processes such as Langmuir turbulence, submesocale frontal processes, and nonlocal representations of mixing. Using velocity, hydrographic, and turbulence measurements, the existence of coherent structures in the boundary layer are investigated.

  7. Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra.

    PubMed

    Kim, Hye Min; Lee, Min Jin; Jung, Ji Young; Hwang, Chung Yeon; Kim, Mincheol; Ro, Hee-Myong; Chun, Jongsik; Lee, Yoo Kyung

    2016-11-01

    The increasing temperature in Arctic tundra deepens the active layer, which is the upper layer of permafrost soil that experiences repeated thawing and freezing. The increasing of soil temperature and the deepening of active layer seem to affect soil microbial communities. Therefore, information on soil microbial communities at various soil depths is essential to understand their potential responses to climate change in the active layer soil. We investigated the community structure of soil bacteria in the active layer from moist acidic tundra in Council, Alaska. We also interpreted their relationship with some relevant soil physicochemical characteristics along soil depth with a fine scale (5 cm depth interval). The bacterial community structure was found to change along soil depth. The relative abundances of Acidobacteria, Gammaproteobacteria, Planctomycetes, and candidate phylum WPS-2 rapidly decreased with soil depth, while those of Bacteroidetes, Chloroflexi, Gemmatimonadetes, and candidate AD3 rapidly increased. A structural shift was also found in the soil bacterial communities around 20 cm depth, where two organic (upper Oi and lower Oa) horizons are subdivided. The quality and the decomposition degree of organic matter might have influenced the bacterial community structure. Besides the organic matter quality, the vertical distribution of bacterial communities was also found to be related to soil pH and total phosphorus content. This study showed the vertical change of bacterial community in the active layer with a fine scale resolution and the possible influence of the quality of soil organic matter on shaping bacterial community structure.

  8. New Synthesis of Ocean Crust Velocity Structure From Two-Dimensional Profiles

    NASA Astrophysics Data System (ADS)

    Christeson, G. L.; Goff, J.; Carlson, R. L.; Reece, R.

    2017-12-01

    The velocity structure of typical oceanic crust consists of Layer 2, where velocities increase rapidly with depth from seafloor, and Layer 3, which is thicker and has a lower velocity gradient. Previous syntheses have found no correlation of velocity structure with spreading rate, even though we know that magmatic processes differ between slow-spreading and fast-spreading crust. We present a new synthesis of ocean crust velocity structure, compiling observations from two-dimensional studies in the Atlantic, Pacific, and Indian ocean basins. The Layer 2/3 boundary was picked from each publication at a change in gradient either on velocity-depth functions or contour plots (with at least 0.5 km/s contour interval), or from the appropriate layer boundary for layered models. We picked multiple locations at each seismic refraction profile if warranted by model variability. Preliminary results show statistically significant differences in average Layer 2 and Layer 3 thicknesses between slow-spreading and superfast-spreading crust, with Layer 2 thinner and Layer 3 thicker for the higher spreading rate crust. The thickness changes are about equivalent, resulting in no change in mean crustal thickness. The Layer 2/3 boundary is often interpreted as the top of the gabbros; however, a comparison with mapped magma lens depths at the ridge axis shows that the boundary is typically deeper than average axial melt lens depth at superfast-spreading crust, and shallower at intermediate-spreading crust.

  9. Improved Boundary Layer Depth Retrievals from MPLNET

    NASA Technical Reports Server (NTRS)

    Lewis, Jasper R.; Welton, Ellsworth J.; Molod, Andrea M.; Joseph, Everette

    2013-01-01

    Continuous lidar observations of the planetary boundary layer (PBL) depth have been made at the Micropulse Lidar Network (MPLNET) site in Greenbelt, MD since April 2001. However, because of issues with the operational PBL depth algorithm, the data is not reliable for determining seasonal and diurnal trends. Therefore, an improved PBL depth algorithm has been developed which uses a combination of the wavelet technique and image processing. The new algorithm is less susceptible to contamination by clouds and residual layers, and in general, produces lower PBL depths. A 2010 comparison shows the operational algorithm overestimates the daily mean PBL depth when compared to the improved algorithm (1.85 and 1.07 km, respectively). The improved MPLNET PBL depths are validated using radiosonde comparisons which suggests the algorithm performs well to determine the depth of a fully developed PBL. A comparison with the Goddard Earth Observing System-version 5 (GEOS-5) model suggests that the model may underestimate the maximum daytime PBL depth by 410 m during the spring and summer. The best agreement between MPLNET and GEOS-5 occurred during the fall and they diered the most in the winter.

  10. 9 CFR 113.110 - Clostridium Botulinum Type C Bacterin-Toxoid.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... challenged intraperitoneally with botulinum Type C toxin which has been titrated in mice to provide for a 104.0 mouse MLD dose. The titration technique shall include inoculation of the mice intraperitoneally...

  11. Method and apparatus for the evaluation of a depth profile of thermo-mechanical properties of layered and graded materials and coatings

    DOEpatents

    Finot, Marc; Kesler, Olivera; Suresh, Subra

    1998-01-01

    A technique for determining properties such as Young's modulus, coefficient of thermal expansion, and residual stress of individual layers within a multi-layered sample is presented. The technique involves preparation of a series of samples, each including one additional layer relative to the preceding sample. By comparison of each sample to a preceding sample, properties of the topmost layer can be determined, and residual stress at any depth in each sample, resulting from deposition of the top layer, can be determined.

  12. Changes in the depth habitat of the Oligocene planktic foraminifera (Dentoglobigerina venezuelana) induced by thermocline deepening in the eastern equatorial Pacific

    NASA Astrophysics Data System (ADS)

    Matsui, Hiroki; Nishi, Hiroshi; Takashima, Reishi; Kuroyanagi, Azumi; Ikehara, Minoru; Takayanagi, Hideko; Iryu, Yasufumi

    2016-06-01

    Understanding planktic foraminiferal depth habitat along with consistent taxonomic concepts is key to accurate reconstruction of paleoceanographic records. The Oligocene-Pliocene long-ranging and widely distributed species Dentoglobigerina venezuelana lived in the mixed layer (shallower) during the early Oligocene, whereas the same species calcified at thermocline or subthermocline depths (deeper) during the late Oligocene and Miocene. The exact timing of the species' depth habitat change and its possible relationships with Oligocene climate dynamics remain unknown. Here we reveal isotopic records of D. venezuelana along with the Paragloborotalia siakensis group (a mixed-layer dweller) by using sediments at Integrated Ocean Drilling Program Site U1334 in the eastern equatorial Pacific throughout the Oligocene. A two-step depth habitat change of D. venezuelana is apparent: (1) from upper to lower mixed layer (~27.4 Ma) and (2) from lower mixed layer to thermocline depth (~26.3 Ma). In addition, the planktic foraminiferal faunal assemblage experienced a marked change from dominantly thermocline (deeper) species to abundant mixed-layer (shallower) species, suggesting that depth habitat shifts of D. venezuelana were clearly related to thermocline deepening in the eastern equatorial Pacific. Comparison of the first isotopic shift (~27.4 Ma) at multiple sites (U1334, U1333, and 1218) revealed a southward depth habitat change of D. venezuelana within ~200 kyr, implying overall thermocline deepening with reduced steepness in the eastern equatorial Pacific. We consider that global warming conditions during the late Oligocene likely caused thermocline deepening with upwelling decrease in the eastern equatorial Pacific, guiding D. venezuelana to adapt to greater depths in the water column.

  13. A method of increasing the depth of the plastically deformed layer in the roller burnishing process

    NASA Astrophysics Data System (ADS)

    Kowalik, Marek; Trzepiecinski, Tomasz

    2018-05-01

    The subject of this paper is an analysis of the determination of the depth of the plastically deformed layer in the process of roller burnishing a shaft using a newly developed method in which a braking moment is applied to the roller. It is possible to increase the depth of the plastically deformed layer by applying the braking moment to the roller during the burnishing process. The theoretical considerations presented are based on the Hertz-Bielayev and Huber-Mises theories and permit the calculation of the depth of plastic deformation of the top layer of the burnished shaft. The theoretical analysis has been verified experimentally and using numerical calculations based on the finite element method using the Msc.MARC program. Experimental tests were carried out on ring-shaped samples made of C45 carbon steel. The samples were burnished at different values of roller force and different values of braking moment. A significant increase was found in the depth of the plastically deformed surface layer of roller burnished shafts. Usage of the phenomenon of strain hardening of steel allows the technology presented here to increase the fatigue life of the shafts.

  14. A new method of Curie depth evaluation from magnetic data: Theory

    NASA Technical Reports Server (NTRS)

    Won, I. J. (Principal Investigator)

    1981-01-01

    An approach to estimating the Curie point isotherm uses the classical Gauss method inverting a system of nonlinear equations. The method, slightly modified by a differential correction technique, directly inverts filtered Magsat data to calculate the crustal structure above the Curie depth, which is modeled as a magnetized layer of varying thickness and susceptibility. Since the depth below the layer is assumed to be nonmagnetic, the bottom of the layer is interpreted as the Curie depth. The method, once fully developed, tested, and compared with previous work by others, is to be applied to a portion of the eastern U.S. when sufficient Magsat data are accumulated for the region.

  15. Depth-resolved fluorescence of biological tissue

    NASA Astrophysics Data System (ADS)

    Wu, Yicong; Xi, Peng; Cheung, Tak-Hong; Yim, So Fan; Yu, Mei-Yung; Qu, Jianan Y.

    2005-06-01

    The depth-resolved autofluorescence ofrabbit oral tissue, normal and dysplastic human ectocervical tissue within l20μm depth were investigated utilizing a confocal fluorescence spectroscopy with the excitations at 355nm and 457nm. From the topmost keratinizing layer of oral and ectocervical tissue, strong keratin fluorescence with the spectral characteristics similar to collagen was observed. The fluorescence signal from epithelial tissue between the keratinizing layer and stroma can be well resolved. Furthermore, NADH and FADfluorescence measured from the underlying non-keratinizing epithelial layer were strongly correlated to the tissue pathology. This study demonstrates that the depth-resolved fluorescence spectroscopy can reveal fine structural information on epithelial tissue and potentially provide more accurate diagnostic information for determining tissue pathology.

  16. Background, Foreground and the Ground in Between: Layers of Depth!

    ERIC Educational Resources Information Center

    McGovern, Cynthia

    2009-01-01

    This article describes a lesson in picture depth. The lesson involves tracing paper layers, object size and raising the horizon line per page layer. Students learn to look at and scan a photograph or print, break down the picture's qualities, and design elements and principles. Students also gain an increased appreciation for design and artist…

  17. Annual egg production rates of calanoid copepod species on the continental shelf of the Eastern Tropical Pacific off Mexico

    NASA Astrophysics Data System (ADS)

    Kozak, Eva R.; Franco-Gordo, Carmen; Palomares-García, Ricardo; Gómez-Gutiérrez, Jaime; Suárez-Morales, Eduardo

    2017-01-01

    We provide the first estimations of calanoid copepod egg production rates (EPR) in the Eastern Tropical Pacific over an annual cycle (January-December 2011). Gravid females were collected twice monthly and incubated for 12 h without food to estimate EPR, weight-specific fecundity (Gf), spawning success (SS, percentage of females to spawn out of the total species incubated per month and season) and egg hatching success (EHS). This study reports the average EPR of 10 species and the monthly EPR and Gf of four planktonic calanoid copepods (Centropages furcatus, Temora discaudata, Pontellina sobrina, and Nannocalanus minor) that spawned with enough frequency to infer their seasonal reproductive patterns. These species showed distinct seasonal reproductive strategies. Most copepod species spawned sporadically with large EPR variability, while three copepod species reproduced throughout the year (C. furcatus, T. discaudata and P. sobrina) and N. minor spawned only during the mixed period (Feb-May). The four species had relatively similar average EPR (C. furcatus 16, T. discaudata 18, P. sobrina 13, and N. minor 12 eggs fem-1 day-1). These are the first EPR estimations of P. sobrina and its previously known reproductive period is expanded. A Canonical Correspondence Analysis (CCA) was used to analyze EPR and species abundance of all calanoid copepods (40 spp.) collected throughout the time series in relation to temperature, salinity, mixed layer depth (MLD), dissolved oxygen, and chlorophyll a (Chl-a) concentrations to identify the variables that best explained the copepod abundance variability. Temperature, Chl-a, and salinity had the strongest effect on the biological variables, linked to seasonal and episodic upwelling-downwelling processes in the surveyed area. As a result of moderate upwelling events and seasonal variation of environmental conditions, it appears relatively few species are capable of maintaining continuous reproduction under the relatively higher temperatures and strong fluctuations of food availability that exist in this coastal habitat of the Eastern Tropical Pacific.

  18. Method and apparatus for the evaluation of a depth profile of thermo-mechanical properties of layered and graded materials and coatings

    DOEpatents

    Finot, M.; Kesler, O.; Suresh, S.

    1998-12-08

    A technique for determining properties such as Young`s modulus, coefficient of thermal expansion, and residual stress of individual layers within a multi-layered sample is presented. The technique involves preparation of a series of samples, each including one additional layer relative to the preceding sample. By comparison of each sample to a preceding sample, properties of the topmost layer can be determined, and residual stress at any depth in each sample, resulting from deposition of the top layer, can be determined. 11 figs.

  19. Modeling Fire Severity in Black Spruce Stands in the Alaskan Boreal Forest Using Spectral and Non-Spectral Geospatial Data

    NASA Technical Reports Server (NTRS)

    Barrett, K.; Kasischke, E. S.; McGuire, A. D.; Turetsky, M. R.; Kane, E. S.

    2010-01-01

    Biomass burning in the Alaskan interior is already a major disturbance and source of carbon emissions, and is likely to increase in response to the warming and drying predicted for the future climate. In addition to quantifying changes to the spatial and temporal patterns of burned areas, observing variations in severity is the key to studying the impact of changes to the fire regime on carbon cycling, energy budgets, and post-fire succession. Remote sensing indices of fire severity have not consistently been well-correlated with in situ observations of important severity characteristics in Alaskan black spruce stands, including depth of burning of the surface organic layer. The incorporation of ancillary data such as in situ observations and GIS layers with spectral data from Landsat TM/ETM+ greatly improved efforts to map the reduction of the organic layer in burned black spruce stands. Using a regression tree approach, the R2 of the organic layer depth reduction models was 0.60 and 0.55 (pb0.01) for relative and absolute depth reduction, respectively. All of the independent variables used by the regression tree to estimate burn depth can be obtained independently of field observations. Implementation of a gradient boosting algorithm improved the R2 to 0.80 and 0.79 (pb0.01) for absolute and relative organic layer depth reduction, respectively. Independent variables used in the regression tree model of burn depth included topographic position, remote sensing indices related to soil and vegetation characteristics, timing of the fire event, and meteorological data. Post-fire organic layer depth characteristics are determined for a large (N200,000 ha) fire to identify areas that are potentially vulnerable to a shift in post-fire succession. This application showed that 12% of this fire event experienced fire severe enough to support a change in post-fire succession. We conclude that non-parametric models and ancillary data are useful in the modeling of the surface organic layer fire depth. Because quantitative differences in post-fire surface characteristics do not directly influence spectral properties, these modeling techniques provide better information than the use of remote sensing data alone.

  20. Modeling fire severity in black spruce stands in the Alaskan boreal forest using spectral and non-spectral geospatial data

    USGS Publications Warehouse

    Barrett, Kirsten M.; Kasischke, E.S.; McGuire, A.D.; Turetsky, M.R.; Kane, E.S.

    2010-01-01

    Biomass burning in the Alaskan interior is already a major disturbance and source of carbon emissions, and is likely to increase in response to the warming and drying predicted for the future climate. In addition to quantifying changes to the spatial and temporal patterns of burned areas, observing variations in severity is the key to studying the impact of changes to the fire regime on carbon cycling, energy budgets, and post-fire succession. Remote sensing indices of fire severity have not consistently been well-correlated with in situ observations of important severity characteristics in Alaskan black spruce stands, including depth of burning of the surface organic layer. The incorporation of ancillary data such as in situ observations and GIS layers with spectral data from Landsat TM/ETM+ greatly improved efforts to map the reduction of the organic layer in burned black spruce stands. Using a regression tree approach, the R2 of the organic layer depth reduction models was 0.60 and 0.55 (pb0.01) for relative and absolute depth reduction, respectively. All of the independent variables used by the regression tree to estimate burn depth can be obtained independently of field observations. Implementation of a gradient boosting algorithm improved the R2 to 0.80 and 0.79 (pb0.01) for absolute and relative organic layer depth reduction, respectively. Independent variables used in the regression tree model of burn depth included topographic position, remote sensing indices related to soil and vegetation characteristics, timing of the fire event, and meteorological data. Post-fire organic layer depth characteristics are determined for a large (N200,000 ha) fire to identify areas that are potentially vulnerable to a shift in post-fire succession. This application showed that 12% of this fire event experienced fire severe enough to support a change in post-fire succession. We conclude that non-parametric models and ancillary data are useful in the modeling of the surface organic layer fire depth. Because quantitative differences in post-fire surface characteristics do not directly influence spectral properties, these modeling techniques provide better information than the use of remote sensing data alone.

  1. On-line determination of pork color and intramuscular fat by computer vision

    NASA Astrophysics Data System (ADS)

    Liao, Yi-Tao; Fan, Yu-Xia; Wu, Xue-Qian; Xie, Li-juan; Cheng, Fang

    2010-04-01

    In this study, the application potential of computer vision in on-line determination of CIE L*a*b* and content of intramuscular fat (IMF) of pork was evaluated. Images of pork chop from 211 pig carcasses were captured while samples were on a conveyor belt at the speed of 0.25 m•s-1 to simulate the on-line environment. CIE L*a*b* and IMF content were measured with colorimeter and chemical extractor as reference. The KSW algorithm combined with region selection was employed in eliminating the surrounding fat of longissimus dorsi muscle (MLD). RGB values of the pork were counted and five methods were applied for transforming RGB values to CIE L*a*b* values. The region growing algorithm with multiple seed points was applied to mask out the IMF pixels within the intensity corrected images. The performances of the proposed algorithms were verified by comparing the measured reference values and the quality characteristics obtained by image processing. MLD region of six samples could not be identified using the KSW algorithm. Intensity nonuniformity of pork surface in the image can be eliminated efficiently, and IMF region of three corrected images failed to be extracted. Given considerable variety of color and complexity of the pork surface, CIE L*, a* and b* color of MLD could be predicted with correlation coefficients of 0.84, 0.54 and 0.47 respectively, and IMF content could be determined with a correlation coefficient more than 0.70. The study demonstrated that it is feasible to evaluate CIE L*a*b* values and IMF content on-line using computer vision.

  2. Importance of interaction between nerve growth factor and α9β1 integrin in glial tumor angiogenesis

    PubMed Central

    Walsh, Erin M.; Kim, Richard; Del Valle, Luis; Weaver, Michael; Sheffield, Joel; Lazarovici, Philip; Marcinkiewicz, Cezary

    2012-01-01

    NGF is a growth factor for which the role in the promotion of angiogenesis is still not completely understood. We found that NGF promotes the pathological neovascularization process in glioma through a direct interaction with α9β1 integrin, which is up-regulated on microvascular endothelial cells in cancer tissue. We propagated gHMVEC primary cells using a new method of immune-selection, and these cells demonstrated α9β1 integrin-dependent binding of NGF in a cell adhesion assay. Moreover, NGF induced gHMVEC proliferation and chemotaxis inhibited by specific blockers of α9β1 integrin, such as MLD-disintegrins and monoclonal antibody Y9A2. A Matrigel tube formation assay revealed that NGF significantly increased capillary-like growth from gHMVEC to a level comparable to treatment with VEGF. The snake venom disintegrin, VLO5, inhibited the agonistic effect of both growth factors, whereas the effect of Y9A2 was not statistically significant. Angiogenesis exogenously induced by NGF  was also α9β1-integrin dependent in an embryonic quail CAM system. However, angiogenesis pathologically induced by developing glioma in this system was only sensitive for inhibition with MLD-disintegrin, suggesting a more complex effect of cancer cells on the neovascularization process. The anti-angiogenic effect of MLD-disintegrins is probably related to their pro-apoptotic ability induced in activated tumoral endothelial cells. Therefore, the molecular basis of these disintegrins may be useful for developing new angiostatic pharmaceuticals for application in cancer therapy. PMID:22611032

  3. Coffee, tea and caffeine intake and the risk of severe depression in middle-aged Finnish men: the Kuopio Ischaemic Heart Disease Risk Factor Study.

    PubMed

    Ruusunen, Anu; Lehto, Soili M; Tolmunen, Tommi; Mursu, Jaakko; Kaplan, George A; Voutilainen, Sari

    2010-08-01

    Only a few cross-sectional studies have assessed the association between coffee, tea and caffeine and the risk of depression. Our aim was to determine the association in a population-based cohort study. The population-based Kuopio Ischaemic Heart Disease Risk Factor Study cohort was recruited between 1984 and 1989 and followed until the end of 2006. We investigated the association between the intake of coffee, tea and caffeine and depression. Eastern Finland. Middle-aged men (n 2232). Altogether, forty-nine men received a discharge diagnosis of depression. We classified subjects into quartiles according to their mean daily coffee intake: non-drinkers (n 82), light drinkers (<375 ml/d, n 517), moderate drinkers (375-813 ml/d, n 1243) and heavy drinkers (>813 ml/d, n 390). Heavy drinkers had a decreased risk (RR = 0.28, 95 % CI 0.08, 0.98) for depression when compared with non-drinkers, after adjustment for age and examination years. Further adjustment for socio-economic status, alcohol consumption, smoking, maximal oxygen uptake, BMI and the energy-adjusted daily intakes of folate and PUFA did not attenuate this association (relative risk (RR) = 0.23, 95 % CI 0.06, 0.83). No associations were observed between depression and intake of tea (drinkers v. non-drinkers; RR = 1.19, 95 % CI 0.54, 2.23) or caffeine (highest quartile v. lowest quartile; RR = 0.99, 95 % CI 0.40, 2.45). Coffee consumption may decrease the risk of depression, whereas no association was found for tea and caffeine intake.

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Pastor-Soler, N.M.; Hu, D.; Schertz, E.

    Metachromatic leukodystrophy (MLD) is an autosomal recessive lysosomal disorder caused by defective catabolism of sulfatide, an important sphingolipid in myelin. Late infantile (LI), juvenile and adult patients with MLD are found throughout the world. Mutational analysis of the ARSA gene in patients with MLD has resulted in the identification of about 30 mutations. Recently we identified a mutation in the ARSA gene that was present in all Navajo Indian patients tested with LIMLD. All of the patients were homozygous for the G to A change at position 1 of intron 4 which causes aberrant splicing and a low level ofmore » ARSA mRNA. This mutation had not been found in any non-Navajo population. However, recently we were sent samples from two Alaskan Eskimo siblings with LIMLD. Sequencing of amplified genomic DNA showed that the affected siblings were homozygous for the above mutation. A simple DNA-based test will permit accurate patient and carrier identification in both the Eskimo and Navajo populations. Many studies have focused on the migrations of the Amerindian, Athapaskan and Eskimo from eastern Asia to the new world and the intermingling of these peoples. While it is clear that Na-Dene speaking Navajo split from other Athapaskan tribes and migrated from western Canada and Alaska to the southwest area of the United States, a direct genetic connection between the Western Eskimo and the Navajo has not been made. The presence of the same unique mutation causing a fatal inherited disease in both populations may point to interaction between these peoples prior to the migration of the Navajos south about 1000 years ago.« less

  5. Suppressive effects of standard-dose rosuvastatin therapy on the progression of coronary atherosclerosis in Japanese patients: the APOLLO study.

    PubMed

    Amemiya, Kisaki; Yokoi, Hiroyoshi; Domei, Takenori; Shirai, Shinichi; Ando, Kenji; Goya, Masahiko; Iwabuchi, Masashi

    2014-01-01

    We used quantitative coronary angiography (QCA) to investigate whether coronary plaque progression can be inhibited by controlling lipids with rosuvastatin at Japanese standard doses following elective percutaneous coronary intervention (PCI). A total of 143 patients who underwent elective PCI were randomized to either the rosuvastatin (5 or 2.5mg/day) or non-statin group. Changes from baseline in the minimal lumen diameter (MLD) and average lumen diameter (ALD) measured using QCA were analyzed in both target and non-target lesions. The changes in MLD and ALD from baseline to 24 months in the non-target lesions were significantly smaller in the rosuvastatin group than in the non-statin group (-0.079 ± 0.014 mm vs.-0.135 ± 0.019 mm, p=0.022; -0.062 ± 0.012 mmvs. -0.109 ± 0.016mm, p=0.025). The changes in MLD from six to 24 months in the target lesions were significantly lower in the rosuvastatin group than in the non-statin group among the patients treated with drug-eluting stents (-0.046 ± 0.108 mm vs. -0.133 ± 0.108 mm, p=0.009) versus those treated with bare-metal stents (-0.011 ± 0.094 mm vs. -0.015 ± 0.040 mm, p=0.255). The present study demonstrated that the administration of a standard dose of rosuvastatin slows coronary plaque progression and may prevent the late catch-up phenomenon associated with drug-eluting stents in patients who undergo elective PCI.

  6. Current trends in stenting for aortic coarctation in Japan: Subanalysis of Japanese Society of Pediatric Interventional Cardiology (JPIC) stent survey.

    PubMed

    Fujii, Takanari; Tomita, Hideshi; Otsuki, Shinichi; Kobayashi, Toshiki; Ono, Yasuo; Yazaki, Satoshi; Kim, Sung-Hae; Nakanishi, Toshio

    2016-02-01

    Stenting for aortic coarctation (CoA) has been accepted as an alternative to surgery for adolescents and adults, but only a few case have been reported in Japan. The purpose of this study was to provide a detailed review of Japanese national data on stenting of CoA. In a subanalysis of the data of the Japanese Society of Pediatric Interventional Cardiology (JPIC), we identified 35 patients with CoA who underwent stenting. We analyzed procedural characteristics including factors that may have contributed to hemodynamic effectiveness, and we compared these parameters between the patients under and over 15 years of age. The mean ratio of balloon diameter/minimum lumen diameter (MLD) before stenting was 1.7 (range, 1.2-4.0), and the mean difference between the balloon diameter and the reference vessel diameter was -0.7 mm (range, -5.0 to +3.0 mm). %MLD/balloon diameter, which was defined as [(balloon diameter - MLD after dilation)/balloon diameter] × 100 predicted achievement of <10 mmHg pressure gradient after stenting. The sensitivity and the specificity of its cut-off of 7% were 93% and 47% (AUC, 0.7), respectively. There was no statistical difference between the two age groups under and over 15 years of age, in terms of selection criteria of stent size, balloon type used for deployment and immediate angiographic and hemodynamic result. Stenting for CoA was clinically effective with few complications in Japan, even in patients not fully grown. © 2015 Japan Pediatric Society.

  7. Investigation of alterations in multifractality in optical coherence tomographic images of in vivo human retina

    NASA Astrophysics Data System (ADS)

    Das, Nandan Kumar; Mukhopadhyay, Sabyasachi; Ghosh, Nirmalya; Chhablani, Jay; Richhariya, Ashutosh; Divakar Rao, Kompalli; Sahoo, Naba Kishore

    2016-09-01

    Optical coherence tomography (OCT) enables us to monitor alterations in the thickness of the retinal layer as disease progresses in the human retina. However, subtle morphological changes in the retinal layers due to early disease progression often may not lead to detectable alterations in the thickness. OCT images encode depth-dependent backscattered intensity distribution arising due to the depth distributions of the refractive index from tissue microstructures. Here, such depth-resolved refractive index variations of different retinal layers were analyzed using multifractal detrended fluctuation analysis, a special class of multiresolution analysis tools. The analysis extracted and quantified microstructural multifractal information encoded in normal as well as diseased human retinal OCT images acquired in vivo. Interestingly, different layers of the retina exhibited different degrees of multifractality in a particular retina, and the individual layers displayed consistent multifractal trends in healthy retinas of different human subjects. In the retinal layers of diabetic macular edema (DME) subjects, the change in multifractality manifested prominently near the boundary of the DME as compared to the normal retinal layers. The demonstrated ability to quantify depth-resolved information on multifractality encoded in OCT images appears promising for the early diagnosis of diseases of the human eye, which may also prove useful for detecting other types of tissue abnormalities from OCT images.

  8. Tephra layers in the Siple Dome and Taylor Dome ice cores, Antarctica: Sources and correlations

    NASA Astrophysics Data System (ADS)

    Dunbar, Nelia W.; Zielinski, Gregory A.; Voisins, Daniel T.

    2003-08-01

    Volcanic ash, or tephra layers, are found in the Taylor Dome, Siple Dome A, and Siple Dome B ice cores. Significant shard concentrations are found at a number of depths in all three cores. Electron and ion microprobe analyses indicate that the geochemical composition of most layers is basaltic, basanitic, or trachytic, and the geochemical signatures of the layers suggest derivation from the Pleiades volcanic center, Mt. Melbourne volcano, or small mafic centers, probably in the Royal Society Range area. Presence of tephra layers suggests an episode of previously unrecognized Antarctic volcanic activity between 1776 and 1805 A.D., from at least two volcanic centers. A strong geochemical correlation (D = 3.49 and 3.97 with a value of 4 considered identical) is observed between tephra layers at depth of 79.2 m in the Taylor Dome ice core, and layers between 97.2 and 97.7 m depth in the Siple B core. This correlation, and the highly accurate depth-age scale of the Siple B core suggest that the age of this horizon in the Taylor Dome ice core presented by [1998a, 2000] should be revised downward, to the younger age of 675 ± 25 years before 1995. This revised chronology is consistent with vertical strain measurements presented by [2003].

  9. Modeling the diurnal cycle of carbon monoxide: Sensitivity to physics, chemistry, biology, and optics

    NASA Astrophysics Data System (ADS)

    Gnanadesikan, Anand

    1996-05-01

    As carbon monoxide within the oceanic surface layer is produced by solar radiation, diluted by mixing, consumed by biota, and outgassed to the atmosphere, it exhibits a diurnal cycle. The effect of dilution and mixing on this cycle is examined using a simple model for production and consumption, coupled to three different mixed layer models. The magnitude and timing of the peak concentration, the magnitude of the average concentration, and the air-sea flux are considered. The models are run through a range of heating and wind stress and compared to experimental data reported by Kettle [1994]. The key to the dynamics is the relative size of four length scales; Dmix, the depth to which mixing occurs over the consumption time; L, the length scale over which production occurs; Lout, the depth to which the mixed layer is ventilated over the consumption time; and Lcomp, the depth to which the diurnal production can maintain a concentration in equilibrium with the atmosphere. If Dmix ≫ L, the actual model parameterization can be important. If the mixed layer is maintained by turbulent diffusion, Dmix can be substantially less than the mixed layer depth. If the mixed layer is parameterized as a homogeneous slab, Dmix is equivalent to the mixed layer depth. If Dmix > Lout, production is balanced by consumption rather than outgassing. The ratio between Dmix and Lcomp determines whether the ocean is a source or a sink for CO. The main thermocline depth H sets an upper limit for Dmix and hence Dmix/L, Dmix/Lout, and Dmix/Lcomp. The models are run to simulate a single day of observations. The mixing parameterization is shown to be very important, with a model which mixes using small-scale diffusion, producing markedly larger surface concentrations than models which homogenize the mixed layer completely and instantaneously.

  10. Effects of trees on the burning of organic layers on permafrost terrain

    Treesearch

    Eric S. Kasischke; Merritt R. Turetsky; Evan S. Kane

    2012-01-01

    We collected data to estimate depth of the remaining (residual) organic layer as well as data to estimate total pre-fire organic layer depth in 99 plots located in mature black spruce (Picea mariana (Mill.) BSP) forests in interior Alaska that burned during the large fire seasons of 2004 and 2005. These data were collected immediately adjacent to...

  11. Tamarack and black spruce adventitious root patterns are similar in their ability to estimate organic layer depths in northern temperate forests

    Treesearch

    Timothy J. Veverica; Evan S. Kane; Eric S. Kasischke

    2012-01-01

    Organic layer consumption during forest fires is hard to quantify. These data suggest that the adventitious root methods developed for reconstructing organic layer depths following wildfires in boreal black spruce forests can also be applied to mixed tamarack forests growing in temperate regions with glacially transported soils.

  12. Electrical Resistivity and Ground Penetrating Radar Investigation of Presence and Extent of Hardpan Soil Layers

    NASA Astrophysics Data System (ADS)

    Thao, S. J.; Plattner, A.

    2015-12-01

    Farming in the San Joaquin Valley in central California is often impeded by a shallow rock-hard layer of consolidated soil commonly referred to as hardpan. To be able to successfully farm, this layer, if too shallow, needs to be removed either with explosives or heavy equipment. It is therefore of great value to obtain information about depth and presence of such a layer prior to agricultural operations. We tested the applicability of electrical resistivity tomography and ground penetrating radar in hardpan detection. On our test site of known hardpan depth (from trenching) and local absence (prior dynamiting to plant trees), we successfully recovered the known edge of a hardpan layer with both methods, ERT and GPR. The clay-rich soil significantly reduced the GPR penetration depth but we still managed to map the edges at a known gap where prior dynamiting had removed the hardpan. Electrical resistivity tomography with a dipole-dipole electrode configuration showed a clear conductive layer at expected depths with a clearly visible gap at the correct location. In our data analysis and representation we only used either freely available or in-house written software.

  13. Monoatomic layer removal mechanism in chemical mechanical polishing process: A molecular dynamics study

    NASA Astrophysics Data System (ADS)

    Si, Lina; Guo, Dan; Luo, Jianbin; Lu, Xinchun

    2010-03-01

    Molecular dynamics simulations of nanoscratching processes were used to study the atomic-scale removal mechanism of single crystalline silicon in chemical mechanical polishing (CMP) process and particular attention was paid to the effect of scratching depth. The simulation results under a scratching depth of 1 nm showed that a thick layer of silicon material was removed by chip formation and an amorphous layer was formed on the silicon surface after nanoscratching. By contrast, the simulation results with a depth of 0.1 nm indicated that just one monoatomic layer of workpiece was removed and a well ordered crystalline surface was obtained, which is quite consistent with previous CMP experimental results. Therefore, monoatomic layer removal mechanism was presented, by which it is considered that during CMP process the material was removed by one monoatomic layer after another, and the mechanism could provide a reasonable understanding on how the high precision surface was obtained. Also, the effects of the silica particle size and scratching velocity on the removal mechanism were investigated; the wear regimes and interatomic forces between silica particle and workpiece were studied to account for the different removal mechanisms with indentation depths of 0.1 and 1 nm.

  14. Children with congenital limb deficiency in Norway: issues related to school life and health-related quality of life. A cross-sectional study.

    PubMed

    Johansen, Heidi; Dammann, Brede; Øinæs Andersen, Liv; Andresen, Inger-Lise

    2016-09-01

    To describe clinical features, issues related to school life and health-related quality of life (HRQOL) for children with congenital limb deficiency (CLD) and compare these children to Norwegian school children on HRQOL. Cross-sectional study. In 2010, a postal questionnaire, designed for this study and the Paediatric Quality of Life Inventory (PedsQL), was sent to 154 eligible parents of children with CLD, aged 6-18 years and registered at TRS National Resource Centre for Rare Disorders in Norway. Response rate 44% (n = 67), median age 11 years, 42% were girls. Of the total group, 46 had unilateral upper limb deficiency (UULD) and 21 had multiple/lower limb deficiency (MLD/LLD). The most common UULD was below-elbow deficiency, of these, 65% used grip-improving devices, and 35% used prostheses. Children with UULD-reported PedsQL score similar to Norwegian schoolchildren (NSC). The MLD/LLD group was heterogeneous; most had below-elbow/knee deficiency. In this group, PedsQL scores were reduced for physical and social functioning compared with NSC. Compared with children with UULD, more children with MLD/LLD were restricted in participation because of pain and fewer participated in physical education with peers. Most children with CLD participated with their peers and managed well in everyday life. Children with MLD/LLD seemed to have more challenges than children with UULD. Approximately one-third of all the children had assistive devices and/or practical assistance in school. Implications for Rehabilitation Most children with upper-limb deficiency (UULD) in Norway manage well in everyday life and have HRQOL equal to other Norwegian children. Many choose grip-improving devices instead of prostheses. Their preferences should be respected and taken into account as the need for new assistive devices arise. For children with pronounced disabilities, access to, and use of, assistive devices, adaptions and practical assistance may be important for participation. Cooperation with the child and the parents is necessary to find useful measures. Physical education and practical subjects may provide special challenges, both for children and their teachers. Children themselves often find good solutions and the tasks should be planned ahead in cooperation with them.

  15. Estimate of Boundary-Layer Depth Over Beijing, China, Using Doppler Lidar Data During SURF-2015

    NASA Astrophysics Data System (ADS)

    Huang, Meng; Gao, Zhiqiu; Miao, Shiguang; Chen, Fei; LeMone, Margaret A.; Li, Ju; Hu, Fei; Wang, Linlin

    2017-03-01

    Planetary boundary-layer (PBL) structure was investigated using observations from a Doppler lidar and the 325-m Institute of Atmospheric Physics (IAP) meteorological tower in the centre of Beijing during the summer 2015 Study of Urban-impacts on Rainfall and Fog/haze (SURF-2015) field campaign. Using six fair-weather days of lidar and tower data under clear to cloudy skies, we evaluate the ability of the Doppler lidar to probe the urban boundary-layer structure, and then propose a composite method for estimating the diurnal cycle of the PBL depth using the Doppler lidar. For the convective boundary layer (CBL), a threshold method using vertical velocity variance (σ _w^2 >0.1 m2s^{-2}) is used, since it provides more reliable CBL depths than a conventional maximum wind-shear method. The nocturnal boundary-layer (NBL) depth is defined as the height at which σ _w^2 decreases to 10 % of its near-surface maximum minus a background variance. The PBL depths determined by combining these methods have average values ranging from ≈ 270 to ≈ 1500 m for the six days, with the greatest maximum depths associated with clear skies. Release of stored and anthropogenic heat contributes to the maintenance of turbulence until late evening, keeping the NBL near-neutral and deeper at night than would be expected over a natural surface. The NBL typically becomes more shallow with time, but grows in the presence of low-level nocturnal jets. While current results are promising, data over a broader range of conditions are needed to fully develop our PBL-depth algorithms.

  16. Trapped Modes in a Three-Layer Fluid

    NASA Astrophysics Data System (ADS)

    Saha, Sunanda; Bora, Swaroop Nandan

    2018-03-01

    In this work, trapped mode frequencies are computed for a submerged horizontal circular cylinder with the hydrodynamic set-up involving an infinite depth three-layer incompressible fluid with layer-wise different densities. The impermeable cylinder is fully immersed in either the bottom layer or the upper layer. The effect of surface tension at the surface of separation is neglected. In this set-up, there exist three wave numbers: the lowest one on the free surface and the other two on the internal interfaces. For each wave number, there exist two modes for which trapped waves exist. The existence of these trapped modes is shown by numerical evidence. We investigate the variation of these trapped modes subject to change in the depth of the middle layer as well as the submergence depth. We show numerically that two-layer and single-layer results cannot be recovered in the double and single limiting cases of the density ratios tending to unity. The existence of trapped modes shows that in general, a radiation condition for the waves at infinity is insufficient for the uniqueness of the solution of the scattering problem.

  17. [Calculation of environmental dredging depth of heavy sediments in Zhushan Bay of Taihu Lake metal polluted].

    PubMed

    Jiang, Xia; Wang, Wen-Wen; Wang, Shu-Hang; Jin, Xiang-Can

    2012-04-01

    Horizontal distribution of heavy metals in surface sediments of Zhushan Bay was investigated, and core sediment samples were collected in the representative area. Core sediments were divided into oxide layer (A), polluted layer (B), upper polluted transition layer(C1), lower polluted transition layer(C2) and normal mud layer(D) from top to bottom. The change of total contents of Cr, Ni, Cu, Zn, As, Cd, Hg, Pb and contents of biological available Cr, Ni, Cu, Zn, As, Cd, Pb with depths were analyzed. Ecological risk assessment of heavy metals in sediments was done by potential ecological risk index method. At last, environmental dredging depth was calculated. The results shows that the contents of Cr, Ni, Cu, Zn, As, Cd, Hg, Pb are 30.56-216.58, 24.07-59.95, 16.71-140.30, 84.31-193.43, 3.39-22.30, 0.37-1.59, 0.00-0.80 and 9.67-99.35 mg x kg(-1), respectively. The average concentrations of Cr, Ni, Cu, Zn, As, Cd, Hg, Pb are 79.74, 37.74, 44.83, 122.39, 10.39, 0.77, 0.14 and 40.08 mg x kg(-1), respectively. Heavy metals in the surface sediments of Zhushan Bay mainly distribute in the west bank and the estuaries of Taige canal, Yincun Port, and Huanshan River,and Cd pollution is relatively serious. There is an accumulative effect of heavy metals in Zhushan Bay, and the contents of biological available metals decrease with depths. Ecological risk grades of Cd in layer A and B are high, and the comprehensive potential ecological risk grades of each layer are in middle or low. The environmental dredging layers are A and B, and the average dredging depth is 0.39 m.

  18. Observing continental boundary-layer structure and evolution over the South African savannah using a ceilometer

    NASA Astrophysics Data System (ADS)

    Gierens, Rosa T.; Henriksson, Svante; Josipovic, Micky; Vakkari, Ville; van Zyl, Pieter G.; Beukes, Johan P.; Wood, Curtis R.; O'Connor, Ewan J.

    2018-05-01

    The atmospheric boundary layer (BL) is the atmospheric layer coupled to the Earth's surface at relatively short timescales. A key quantity is the BL depth, which is important in many applied areas of weather and climate such as air-quality forecasting. Studying BLs in climates and biomes across the globe is important, particularly in the under-sampled southern hemisphere. The present study is based on a grazed grassland-savannah area in northwestern South Africa during October 2012-August 2014. Ceilometers are probably the cheapest method for measuring continuous aerosol profiles up to several kilometers above ground and are thus an ideal tool for long-term studies of BLs. A ceilometer-estimated BL depth is based on profiles of attenuated backscattering coefficients from atmospheric aerosols; the sharpest drop often occurs at BL top. Based on this, we developed a new method for layer detection that we call the signal-limited layer method. The new algorithm was applied to ceilometer profiles which thus classified BL into classic regime types: daytime convective mixing, and a double layer at night of surface-based stable with a residual layer above it. We employed wavelet fitting to increase successful BL estimation for noisy profiles. The layer-detection algorithm was supported by an eddy-flux station, rain gauges, and manual inspection. Diurnal cycles were often clear, with BL depth detected for 50% of the daytime typically being 1-3 km, and for 80% of the night-time typically being a few hundred meters. Variability was also analyzed with respect to seasons and years. Finally, BL depths were compared with ERA-Interim estimates of BL depth to show reassuring agreement.

  19. Super-deep low-velocity layer beneath the Arabian plate

    NASA Astrophysics Data System (ADS)

    Vinnik, L.; Ravi Kumar, M.; Kind, R.; Farra, V.

    2003-04-01

    S and P receiver functions reveal indications of a low S velocity layer at 350-410 km depths beneath the Arabian plate. A similar layer was previously found beneath the Kaapvaal craton in southern Africa and Tunguska basin of the Siberian platform. We hypothesize, that the boundary at 350 km depth may separate dry mantle root of the Arabian plate from the underlying wet mantle layer. This boundary is not found beneath the Gulf of Aden, where the root is destroyed by sea-floor spreading.

  20. Temperature Versus Salinity Gradients Below the Ocean Mixed Layer

    DTIC Science & Technology

    2012-05-03

    where salinity controls the depth of the mixed layer are understood to have “barrier” layers [Lukas and Lindstrom , 1991], where the depth of vertically...the horizontal. For example, Rudnick and Martin [2002] have shown that the ocean mixed layer at sub-mesoscales is horizontally well density compensated...Res., 102, 23,063–23,078, doi:10.1029/97JC01443. Barron, C. N., A. B. Kara, P. J. Martin , R. C. Rhodes, and L. F. Smedstad (2006), Formulation

  1. Natural History Study of Children With Metachromatic Leukodystrophy

    ClinicalTrials.gov

    2016-04-19

    Lipid Metabolism Disorders; Metachromatic Leukodystrophy (MLD); Nervous System Diseases; Brain Diseases; Central Nervous System Diseases; Demyelinating Diseases; Metabolism, Inborn Errors; Genetic Diseases, Inborn; Sphingolipidoses; Hereditary Central Nervous System Demyelinating Diseases; Metabolic Inborn Brain Diseases; Lysosomal Storage Diseases; Metabolic Diseases; Sulfatidosis

  2. Effects of oxygen-inserted layers on diffusion of boron, phosphorus, and arsenic in silicon for ultra-shallow junction formation

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Connelly, D.; Takeuchi, H.; Hytha, M.; Mears, R. J.; Rubin, L. M.; Liu, T.-J. K.

    2018-03-01

    The effects of oxygen-inserted (OI) layers on the diffusion of boron (B), phosphorus (P), and arsenic (As) in silicon (Si) are investigated, for ultra-shallow junction formation by high-dose ion implantation followed by rapid thermal annealing. The projected range (Rp) of the implanted dopants is shallower than the depth of the OI layers. Secondary ion mass spectrometry is used to compare the dopant profiles in silicon samples that have OI layers against the dopant profiles in control samples that do not have OI layers. Diffusion is found to be substantially retarded by the OI layers for B and P, and less for As, providing shallower junction depth. The experimental results suggest that the OI layers serve to block the diffusion of Si self-interstitials and thereby effectively reduce interstitial-aided diffusion beyond the depth of the OI layers. The OI layers also help to retain more dopants within the Si, which technology computer-aided design simulations indicate to be beneficial for achieving shallower junctions with lower sheet resistance to enable further miniaturization of planar metal-oxide-semiconductor field-effect transistors for improved integrated-circuit performance and cost per function.

  3. Surface influence upon vertical profiles in the nocturnal boundary layer

    NASA Astrophysics Data System (ADS)

    Garratt, J. R.

    1983-05-01

    Near-surface wind profiles in the nocturnal boundary layer, depth h, above relatively flat, tree-covered terrain are described in the context of the analysis of Garratt (1980) for the unstable atmospheric boundary layer. The observations at two sites imply a surface-based transition layer, of depth z *, within which the observed non-dimensional profiles Φ M 0 are a modified form of the inertial sub-layer relation Φ _M ( {{z L}} = ( {{{1 + 5_Z } L}} ) according to Φ _M^{{0}} ˜eq ( {{{1 + 5z} L}} )exp [ { - 0.7( {{{1 - z} z}_ * } )] , where z is height above the zero-plane displacement and L is the Monin-Obukhov length. At both sites the depth z * is significantly smaller than the appropriate neutral value ( z * N ) found from the previous analysis, as might be expected in the presence of a buoyant sink for turbulent kinetic energy.

  4. Identification Of Rippability And Bedrock Depth Using Seismic Refraction

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ismail, Nur Azwin; Saad, Rosli; Nawawi, M. N. M

    2010-12-23

    Spatial variability of the bedrock with reference to the ground surface is vital for many applications in geotechnical engineering to decide the type of foundation of a structure. A study was done within the development area of Mutiara Damansara utilising the seismic refraction method using ABEM MK8 24 channel seismograph. The geological features of the subsurface were investigated and velocities, depth to the underlying layers were determined. The seismic velocities were correlated with rippability characteristics and borehole records. Seismic sections generally show a three layer case. The first layer with velocity 400-600 m/s predominantly consists of soil mix with gravel.more » The second layer with velocity 1600-2000 m/s is suggested to be saturated and weathered area. Both layers forms an overburden and generally rippable. The third layer represents granite bedrock with average depth and velocity 10-30 m and >3000 m/s respectively and it is non-rippable. Steep slope on the bedrock are probably the results of shear zones.« less

  5. Identification Of Rippability And Bedrock Depth Using Seismic Refraction

    NASA Astrophysics Data System (ADS)

    Ismail, Nur Azwin; Saad, Rosli; Nawawi, M. N. M.; Muztaza, Nordiana Mohd; El Hidayah Ismail, Noer; Mohamad, Edy Tonizam

    2010-12-01

    Spatial variability of the bedrock with reference to the ground surface is vital for many applications in geotechnical engineering to decide the type of foundation of a structure. A study was done within the development area of Mutiara Damansara utilising the seismic refraction method using ABEM MK8 24 channel seismograph. The geological features of the subsurface were investigated and velocities, depth to the underlying layers were determined. The seismic velocities were correlated with rippability characteristics and borehole records. Seismic sections generally show a three layer case. The first layer with velocity 400-600 m/s predominantly consists of soil mix with gravel. The second layer with velocity 1600-2000 m/s is suggested to be saturated and weathered area. Both layers forms an overburden and generally rippable. The third layer represents granite bedrock with average depth and velocity 10-30 m and >3000 m/s respectively and it is non-rippable. Steep slope on the bedrock are probably the results of shear zones.

  6. Study of the Au-Cr bilayer system using X-ray reflectivity, GDOES, and ToF-SIMS

    DOE PAGES

    Jonnard, Philippe; Modi, Mohammed H.; Le Guen, Karine; ...

    2018-04-17

    Here, we study a Au (25 nm)/Cr (10 nm) bilayer system as a model of mirror for the soft X–ray energy range. The Au and Cr thin films are a few nanometer thick and are deposited on a float glass substrate. The sample is characterized by using 3 complementary techniques: soft X–ray reflectivity, glow discharge optical emission spectrometry (GDOES), and time–of–flight secondary ion mass spectroscopy (ToF–SIMS). Soft X–ray reflectivity provides information about the thickness and roughness of the different layers, while GDOES is used to obtain the elemental depth profile of the stack and ToF–SIMS to obtain the elemental andmore » chemical depth profiles. GDOES and ToF–SIMS have both a nanometer depth resolution. A coherent description of the bilayer stack is obtained through the combination of these techniques. It consists in 5 layers namely a surface contamination layer, a principal gold layer, a Au–Cr mixed layer, a Cr layer, and another contamination layer at the top of the substrate.« less

  7. Study of the Au-Cr bilayer system using X-ray reflectivity, GDOES, and ToF-SIMS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jonnard, Philippe; Modi, Mohammed H.; Le Guen, Karine

    Here, we study a Au (25 nm)/Cr (10 nm) bilayer system as a model of mirror for the soft X–ray energy range. The Au and Cr thin films are a few nanometer thick and are deposited on a float glass substrate. The sample is characterized by using 3 complementary techniques: soft X–ray reflectivity, glow discharge optical emission spectrometry (GDOES), and time–of–flight secondary ion mass spectroscopy (ToF–SIMS). Soft X–ray reflectivity provides information about the thickness and roughness of the different layers, while GDOES is used to obtain the elemental depth profile of the stack and ToF–SIMS to obtain the elemental andmore » chemical depth profiles. GDOES and ToF–SIMS have both a nanometer depth resolution. A coherent description of the bilayer stack is obtained through the combination of these techniques. It consists in 5 layers namely a surface contamination layer, a principal gold layer, a Au–Cr mixed layer, a Cr layer, and another contamination layer at the top of the substrate.« less

  8. Comparing a 7-day diary vs. 24 h-recall for estimating fluid consumption in overweight and obese Mexican women.

    PubMed

    Hernández-Cordero, Sonia; López-Olmedo, Nancy; Rodríguez-Ramírez, Sonia; Barquera-Cervera, Simón; Rivera-Dommarco, Juan; Popkin, Barry

    2015-10-07

    High intake of sugar-sweetened beverages (SSB) is linked to increased weight, energy intake, and diabetes. Even though the increasing interest on beverages and water intake, there are few dietary tools carefully validated. The purpose of this paper is to compare a fluid intake 7-day diary against a 24-h recall questionnaire to estimate the fluid consumption in overweight and obese women participating in a randomized controlled trial in Mexico. This cross-sectional study explored the correlation of reported fluid consumption between two methods: 3-day 24-hr recalls and 7-day diary beverage registry in overweight and obese Mexican women aged 18-45 y (n = 190). There was no difference on median estimated volume (mL/d), nor the median estimated energy (kcal/d) from total beverage consumption registered by the two dietary tools. The crude and rank correlation among the two dietary instruments was high for total fluid consumption in mL/d r = 0.7, p < 0.001 (crude and rank correlation) and for fluid consumption measured as energy intake: r = 0.7; p < 0.001 crude, and r = 0.5; p < 0.001 rank correlation. By type of beverage, the more meaningful rank correlations were for fluid intake in: mL/d, water, alcohol beverages, and SSB; and in kcal/d, alcohol beverages and SSBs (rank correlation ≥ 0.6). Overall, the 7-day diary showed high and strong rank correlations with that reported in the 24-h recall, suggesting that the diary method is a valid dietary tool to evaluate total fluid, water and SSB intake in this population.

  9. Learning toward practical head pose estimation

    NASA Astrophysics Data System (ADS)

    Sang, Gaoli; He, Feixiang; Zhu, Rong; Xuan, Shibin

    2017-08-01

    Head pose is useful information for many face-related tasks, such as face recognition, behavior analysis, human-computer interfaces, etc. Existing head pose estimation methods usually assume that the face images have been well aligned or that sufficient and precise training data are available. In practical applications, however, these assumptions are very likely to be invalid. This paper first investigates the impact of the failure of these assumptions, i.e., misalignment of face images, uncertainty and undersampling of training data, on head pose estimation accuracy of state-of-the-art methods. A learning-based approach is then designed to enhance the robustness of head pose estimation to these factors. To cope with misalignment, instead of using hand-crafted features, it seeks suitable features by learning from a set of training data with a deep convolutional neural network (DCNN), such that the training data can be best classified into the correct head pose categories. To handle uncertainty and undersampling, it employs multivariate labeling distributions (MLDs) with dense sampling intervals to represent the head pose attributes of face images. The correlation between the features and the dense MLD representations of face images is approximated by a maximum entropy model, whose parameters are optimized on the given training data. To estimate the head pose of a face image, its MLD representation is first computed according to the model based on the features extracted from the image by the trained DCNN, and its head pose is then assumed to be the one corresponding to the peak in its MLD. Evaluation experiments on the Pointing'04, FacePix, Multi-PIE, and CASIA-PEAL databases prove the effectiveness and efficiency of the proposed method.

  10. Start-up of a sequential dry anaerobic digestion of paunch under psychrophilic and mesophilic temperatures.

    PubMed

    Nkemka, Valentine Nkongndem; Hao, Xiying

    2018-04-01

    The present laboratory study evaluated the sequential leach bed dry anaerobic digestion (DAD) of paunch under psychrophilic (22°C) and mesophilic (40°C) temperatures. Three leach bed reactors were operated under the mesophilic temperature in sequence at a solid retention time (SRT) of 40d with a new batch started 27d into the run of the previous one. A total of six batches were operated for 135d. The results showed that the mesophilic DAD of paunch was efficient, reaching methane yields of 126.9-212.1mLg -1 volatile solid (VS) and a VS reduction of 32.9-55.5%. The average daily methane production rate increased from 334.3mLd -1 to 571.4mLd -1 and 825.7mLd -1 when one, two and three leach bed reactors were in operation, respectively. The psychrophilic DAD of paunch was operated under a SRT of 100d and a total of three batches were performed in sequence for 300d with each batch starting after completion of the previous one. Improvements in the methane yield from 93.9 to 107.3 and 148.3mLg -1 VS and VS reductions of 24.8, 30.2 and 38.6% were obtained in the consecutive runs, indicating the adaptation of anaerobic microbes from mesophilic to psychrophilic temperatures. In addition, it took three runs for anaerobic microbes to reduce the volatile fatty acid accumulation observed in the first and second trials. This study demonstrates the potential of renewable energy recovery from paunch under psychrophilic and mesophilic temperatures. Crown Copyright © 2016. Published by Elsevier Ltd. All rights reserved.

  11. Fully automatic quantitative assessment of emphysema in computed tomography: comparison with pulmonary function testing and normal values.

    PubMed

    Heussel, C P; Herth, F J F; Kappes, J; Hantusch, R; Hartlieb, S; Weinheimer, O; Kauczor, H U; Eberhardt, R

    2009-10-01

    Characterisation and quantification of emphysema are necessary for planning of local treatment and monitoring. Sensitive, easy to measure, and stable parameters have to be established and their relation to the well-known pulmonary function testing (PFT) has to be investigated. A retrospective analysis of 221 nonenhanced thin-section MDCT with a corresponding PFT was carried out, with a subgroup analysis in 102 COPD stage III+IV, 44 COPD stage 0, and 33 investigations into interstitial lung disease (ILD). The in-house YACTA software was used for automatic quantification of lung and emphysema volume [l], emphysema index, mean lung density (MLD [HU]) and 15(th) percentile [HU]. CT-derived lung volume is significantly smaller in ILD (3.8) and larger in COPD (7.2) than in controls (5.9, p < 0.0001). Emphysema volume and index are significantly higher in COPD than in controls (3.2 vs. 0.5, p < 0.0001, 45% vs. 8%, p < 0.0001). MLD and 15(th) percentile are significantly smaller in COPD (-877/-985, p < 0.0001) and significantly higher in ILD (-777, p < 0.0006/-914, p < 0.0001) than in controls (-829/-935). A relevant amount of COPD patients apparently do not suffer from emphysema, while controls who do not fulfil PFT criteria for COPD also demonstrate CT features of emphysema. Automatic quantification of thin-section CT delivers convincing parameters and ranges that are able to differentiate among emphysema, control and ILD. An emphysema index of lower 20%, MLD higher than -850, and 15(th) percentile lower than -950 might be regarded as normal (thin-section, nonenhanced, B40, YACTA). These ranges might be helpful in the judgement of individual measures.

  12. Connections of the Auditory Brainstem in a Songbird, Taeniopygia guttata. II. Projections of Nucleus Angularis and Nucleus Laminaris to the Superior Olive and Lateral Lemniscal Nuclei

    PubMed Central

    Krützfeldt, Nils O.E.; Logerot, Priscilla; Kubke, M. Fabiana; Wild, J. Martin

    2013-01-01

    Three nuclei of the lateral lemniscus are present in the zebra finch, ventral (LLV), intermediate (LLI), and dorsal (LLD). LLV is separate from the superior olive (OS): it lies closer to the spinal lemniscus and extends much further rostrally around the pontine periphery. LLI extends from a caudal position ventrolateral to the principal sensory trigeminal nucleus (LLIc) to a rostral position medial to the ventrolateral parabrachial nucleus (LLIr). LLD consists of posterior (LLDp) and anterior (LLDa) parts, which are largely coextensive rostrocaudally, although LLDa lies medial to LLDp. All nuclei are identifiable on the basis of cytochrome oxidase activity. The cochlear nucleus angularis (NA) and the third-order nucleus laminaris (NL) project on OS predominantly ipsilaterally, on LLV and LLI predominantly contralaterally, and on LLD contralaterally only. The NA projections are heavier than those of NL and differ from them primarily in their terminations within LLD: NA projects to LLDp, whereas NL projects to LLDa. In this the projections are similar to those in the barn owl (Takahashi and Konishi [1988] J Comp Neurol 274:212–238), in which time and intensity pathways remain separate as far as the central nucleus of the inferior colliculus (MLd). In contrast, in the zebra finch, although NA and NL projections remain separate within LLD, the projections of LLDa and LLDp become intermixed within MLd (Wild et al., J Comp Neurol, this issue), consistent with the intermixing of the direct NA and NL projections to MLd (Krützfeldt et al., J Comp Neurol, this issue). J. Comp. Neurol. 518:2135–2148, 2010. PMID:20394062

  13. Scan-rescan reproducibility of CT densitometric measures of emphysema

    NASA Astrophysics Data System (ADS)

    Chong, D.; van Rikxoort, E. M.; Kim, H. J.; Goldin, J. G.; Brown, M. S.

    2011-03-01

    This study investigated the reproducibility of HRCT densitometric measures of emphysema in patients scanned twice one week apart. 24 emphysema patients from a multicenter study were scanned at full inspiration (TLC) and expiration (RV), then again a week later for four scans total. Scans for each patient used the same scanner and protocol, except for tube current in three patients. Lung segmentation with gross airway removal was performed on the scans. Volume, weight, mean lung density (MLD), relative area under -950HU (RA-950), and 15th percentile (PD-15) were calculated for TLC, and volume and an airtrapping mask (RA-air) between -950 and -850HU for RV. For each measure, absolute differences were computed for each scan pair, and linear regression was performed against volume difference in a subgroup with volume difference <500mL. Two TLC scan pairs were excluded due to segmentation failure. The mean lung volumes were 5802 +/- 1420mL for TLC, 3878 +/- 1077mL for RV. The mean absolute differences were 169mL for TLC volume, 316mL for RV volume, 14.5g for weight, 5.0HU for MLD, 0.66p.p. for RA-950, 2.4HU for PD-15, and 3.1p.p. for RA-air. The <500mL subgroup had 20 scan pairs for TLC and RV. The R2 values were 0.8 for weight, 0.60 for MLD, 0.29 for RA-950, 0.31 for PD-15, and 0.64 for RA-air. Our results indicate that considerable variability exists in densitometric measures over one week that cannot be attributed to breathhold or physiology. This has implications for clinical trials relying on these measures to assess emphysema treatment efficacy.

  14. Patient feature based dosimetric Pareto front prediction in esophageal cancer radiotherapy.

    PubMed

    Wang, Jiazhou; Jin, Xiance; Zhao, Kuaike; Peng, Jiayuan; Xie, Jiang; Chen, Junchao; Zhang, Zhen; Studenski, Matthew; Hu, Weigang

    2015-02-01

    To investigate the feasibility of the dosimetric Pareto front (PF) prediction based on patient's anatomic and dosimetric parameters for esophageal cancer patients. Eighty esophagus patients in the authors' institution were enrolled in this study. A total of 2928 intensity-modulated radiotherapy plans were obtained and used to generate PF for each patient. On average, each patient had 36.6 plans. The anatomic and dosimetric features were extracted from these plans. The mean lung dose (MLD), mean heart dose (MHD), spinal cord max dose, and PTV homogeneity index were recorded for each plan. Principal component analysis was used to extract overlap volume histogram (OVH) features between PTV and other organs at risk. The full dataset was separated into two parts; a training dataset and a validation dataset. The prediction outcomes were the MHD and MLD. The spearman's rank correlation coefficient was used to evaluate the correlation between the anatomical features and dosimetric features. The stepwise multiple regression method was used to fit the PF. The cross validation method was used to evaluate the model. With 1000 repetitions, the mean prediction error of the MHD was 469 cGy. The most correlated factor was the first principal components of the OVH between heart and PTV and the overlap between heart and PTV in Z-axis. The mean prediction error of the MLD was 284 cGy. The most correlated factors were the first principal components of the OVH between heart and PTV and the overlap between lung and PTV in Z-axis. It is feasible to use patients' anatomic and dosimetric features to generate a predicted Pareto front. Additional samples and further studies are required improve the prediction model.

  15. TU-C-17A-10: Patient Features Based Dosimetric Pareto Front Prediction In Esophagus Cancer Radiotherapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, J; Zhao, K; Peng, J

    2014-06-15

    Purpose: The purpose of this study is to study the feasibility of the dosimetric pareto front (PF) prediction based on patient anatomic and dosimetric parameters for esophagus cancer patients. Methods: Sixty esophagus patients in our institution were enrolled in this study. A total 2920 IMRT plans were created to generated PF for each patient. On average, each patient had 48 plans. The anatomic and dosimetric features were extracted from those plans. The mean lung dose (MLD), mean heart dose (MHD), spinal cord max dose and PTV homogeneous index (PTVHI) were recorded for each plan. The principal component analysis (PCA) wasmore » used to extract overlap volume histogram (OVH) features between PTV and other critical organs. The full dataset was separated into two parts include the training dataset and the validation dataset. The prediction outcomes were the MHD and MLD for the current study. The spearman rank correlation coefficient was used to evaluate the correlation between the anatomical features and dosimetric features. The PF was fit by the the stepwise multiple regression method. The cross-validation method was used to evaluation the model. Results: The mean prediction error of the MHD was 465 cGy with 100 repetitions. The most correlated factors were the first principal components of the OVH between heart and PTV, and the overlap between heart and PTV in Z-axis. The mean prediction error of the MLD was 195 cGy. The most correlated factors were the first principal components of the OVH between lung and PTV, and the overlap between lung and PTV in Z-axis. Conclusion: It is feasible to use patients anatomic and dosimetric features to generate a predicted PF. Additional samples and further studies were required to get a better prediction model.« less

  16. Patient feature based dosimetric Pareto front prediction in esophageal cancer radiotherapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Jiazhou; Zhao, Kuaike; Peng, Jiayuan

    2015-02-15

    Purpose: To investigate the feasibility of the dosimetric Pareto front (PF) prediction based on patient’s anatomic and dosimetric parameters for esophageal cancer patients. Methods: Eighty esophagus patients in the authors’ institution were enrolled in this study. A total of 2928 intensity-modulated radiotherapy plans were obtained and used to generate PF for each patient. On average, each patient had 36.6 plans. The anatomic and dosimetric features were extracted from these plans. The mean lung dose (MLD), mean heart dose (MHD), spinal cord max dose, and PTV homogeneity index were recorded for each plan. Principal component analysis was used to extract overlapmore » volume histogram (OVH) features between PTV and other organs at risk. The full dataset was separated into two parts; a training dataset and a validation dataset. The prediction outcomes were the MHD and MLD. The spearman’s rank correlation coefficient was used to evaluate the correlation between the anatomical features and dosimetric features. The stepwise multiple regression method was used to fit the PF. The cross validation method was used to evaluate the model. Results: With 1000 repetitions, the mean prediction error of the MHD was 469 cGy. The most correlated factor was the first principal components of the OVH between heart and PTV and the overlap between heart and PTV in Z-axis. The mean prediction error of the MLD was 284 cGy. The most correlated factors were the first principal components of the OVH between heart and PTV and the overlap between lung and PTV in Z-axis. Conclusions: It is feasible to use patients’ anatomic and dosimetric features to generate a predicted Pareto front. Additional samples and further studies are required improve the prediction model.« less

  17. SU-E-T-125: Application of Jaw-Tracking Function in VMAT for Upper Thoracic Esophageal Cancer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhang, W; Chen, J; Zhai, T

    2015-06-15

    Purpose: To explore the effect of the Jaw-tracking with RapidArc(JT-RapidArc) plans for upper thoracic esophageal cancer. Methods: Treatment planning was designed by using RapidArc and JT-RapidArc techniques for 11 consecutive patients. The dose-volume histogram parameters of PTV and the organs at risk(OAR), conformity index(CI), heterogeneity index(HI), low dose volume of normal tissue(B-P) and monitor units(MUs) were compared between the different techniques. Results: JT-RapidArc plans provided the better coverage of PTV1(64) D98 and HI(P<0.05), lower MLD, D2 of PTV1(64) and PTV2(54), but no statistically difference in CI(P>0.05), which comparison with RapidArc plans. Plans with JT- RapidArc had lower Lung of V5,more » V10, V13, V20, V30, MLD(P<0.05); heart of V20, MLD(P<0.05); and B-P of V5, V10, V15, V20, V30(P<0.05); but no significantly different in Spinal cord and SC-PRV as compared with RapidArc plans. JT-RapidArc plans increaseed the MUs by 1%(P>0.05) as compared with RapidArc plans. Conclusion: All of the plans had met the requirements of clinical dosimetry. JT-RapidArc plans as compared with RapidArc plans, showing better part of target coverage, part of OARS(lung and heart) and heart and B-P sparing, which MUs was slightly increased. This work was sponsored by Shantou University Medical College Clinical Research Enhancement Initiative(NO.201424)« less

  18. An ultrasonic measurement for in vitro depth-dependent equilibrium strains of articular cartilage in compression

    NASA Astrophysics Data System (ADS)

    Zheng, Y. P.; Mak, A. F. T.; Lau, K. P.; Qin, L.

    2002-09-01

    The equilibrium depth-dependent biomechanical properties of articular cartilage were measured using an ultrasound-compression method. Ten cylindrical bovine patella cartilage-bone specimens were tested in compression followed by a period of force-relaxation. A 50 MHz focused ultrasound beam was transmitted into the cartilage specimen through a remaining bone layer and a small hole at the centre of a specimen platform. The ultrasound echoes reflected or scattered within the articular cartilage were collected using the same transducer. The displacements of the tissues at different depths of the articular cartilage were derived from the ultrasound echo signals recorded during the compression and the subsequent force-relaxation. For two steps of 0.1 mm compression, the average strain at the superficial 0.2 mm thick layer (0.35 +/- 0.09) was significantly (p < 0.05) larger than that at the subsequent 0.2 mm thick layer (0.05 +/- 0.07) and that at deeper layers (0.01 +/- 0.02). It was demonstrated that the compressive biomechanical properties of cartilage were highly depth-dependent. The results suggested that the ultrasound-compression method could be a useful tool for the study of the depth-dependent biomechanical properties of articular cartilage.

  19. Using a hybrid model to predict solute transfer from initially saturated soil into surface runoff with controlled drainage water.

    PubMed

    Tong, Juxiu; Hu, Bill X; Yang, Jinzhong; Zhu, Yan

    2016-06-01

    The mixing layer theory is not suitable for predicting solute transfer from initially saturated soil to surface runoff water under controlled drainage conditions. By coupling the mixing layer theory model with the numerical model Hydrus-1D, a hybrid solute transfer model has been proposed to predict soil solute transfer from an initially saturated soil into surface water, under controlled drainage water conditions. The model can also consider the increasing ponding water conditions on soil surface before surface runoff. The data of solute concentration in surface runoff and drainage water from a sand experiment is used as the reference experiment. The parameters for the water flow and solute transfer model and mixing layer depth under controlled drainage water condition are identified. Based on these identified parameters, the model is applied to another initially saturated sand experiment with constant and time-increasing mixing layer depth after surface runoff, under the controlled drainage water condition with lower drainage height at the bottom. The simulation results agree well with the observed data. Study results suggest that the hybrid model can accurately simulate the solute transfer from initially saturated soil into surface runoff under controlled drainage water condition. And it has been found that the prediction with increasing mixing layer depth is better than that with the constant one in the experiment with lower drainage condition. Since lower drainage condition and deeper ponded water depth result in later runoff start time, more solute sources in the mixing layer are needed for the surface water, and larger change rate results in the increasing mixing layer depth.

  20. Near-Surface Effects of Free Atmosphere Stratification in Free Convection

    NASA Astrophysics Data System (ADS)

    Mellado, Juan Pedro; van Heerwaarden, Chiel C.; Garcia, Jade Rachele

    2016-04-01

    The effect of a linear stratification in the free atmosphere on near-surface properties in a free convective boundary layer (CBL) is investigated by means of direct numerical simulation. We consider two regimes: a neutral stratification regime, which represents a CBL that grows into a residual layer, and a strong stratification regime, which represents the equilibrium (quasi-steady) entrainment regime. We find that the mean buoyancy varies as z^{-1/3}, in agreement with classical similarity theory. However, the root-mean-square (r.m.s.) of the buoyancy fluctuation and the r.m.s. of the vertical velocity vary as z^{-0.45} and ln z, respectively, both in disagreement with theory. These scaling laws are independent of the stratification regime, but the depth over which they are valid depends on the stratification. In the strong stratification regime, this depth is about 20 to 25 % of the CBL depth instead of the commonly used 10 %, which we only observe under neutral conditions. In both regimes, the near-surface flow structure can be interpreted as a hierarchy of circulations attached to the surface. Based on this structure, we define a new near-surface layer in free convection, the plume-merging layer, that is conceptually different from the constant-flux layer. The varying depth of the plume-merging layer depending on the stratification accounts for the varying depth of validity of the scaling laws. These findings imply that the buoyancy transfer law needed in mixed-layer and single-column models is well described by the classical similarity theory, independent of the stratification in the free atmosphere, even though other near-surface properties, such as the r.m.s. of the buoyancy fluctuation and the r.m.s. of the vertical velocity, are inconsistent with that theory.

  1. Conservative interventions for preventing clinically detectable upper-limb lymphoedema in patients who are at risk of developing lymphoedema after breast cancer therapy.

    PubMed

    Stuiver, Martijn M; ten Tusscher, Marieke R; Agasi-Idenburg, Carla S; Lucas, Cees; Aaronson, Neil K; Bossuyt, Patrick M M

    2015-02-13

    Breast cancer-related lymphoedema can be a debilitating long-term sequela of breast cancer treatment. Several studies have investigated the effectiveness of different treatment strategies to reduce the risk of breast cancer-related lymphoedema. To assess the effects of conservative (non-surgical and non-pharmacological) interventions for preventing clinically-detectable upper-limb lymphoedema after breast cancer treatment. We searched the Cochrane Breast Cancer Group's (CBCG) Specialised Register, CENTRAL, MEDLINE, EMBASE, CINAHL, PEDro, PsycINFO, and the World Health Organization (WHO) International Clinical Trials Registry Platform in May 2013. Reference lists of included trials and other systematic reviews were searched. Randomised controlled trials that reported lymphoedema as the primary outcome and compared any conservative intervention to either no intervention or to another conservative intervention. Three authors independently assessed the risk of bias and extracted data. Outcome measures included lymphoedema, infection, range of motion of the shoulder, pain, psychosocial morbidity, level of functioning in activities of daily life (ADL), and health-related quality of life (HRQoL). Where possible, meta-analyses were performed. Risk ratio (RRs) or hazard ratio (HRs) were reported for dichotomous outcomes or lymphoedema incidence, and mean differences (MDs) for range of motion and patient-reported outcomes. Ten trials involving 1205 participants were included. The duration of patient follow-up ranged from 2 days to 2 years after the intervention. Overall, the quality of the evidence generated by these trials was low, due to risk of bias in the included trials and inconsistency in the results. Manual lymph drainageIn total, four studies used manual lymph drainage (MLD) in combination with usual care or other interventions. In one study, lymphoedema incidence was lower in patients receiving MLD and usual care (consisting of standard education or exercise, or both) compared to usual care alone. A second study reported no difference in lymphoedema incidence when MLD was combined with physiotherapy and education compared to physiotherapy alone. Two other studies combining MLD with compression and scar massage or exercise observed a reduction in lymphoedema incidence compared to education only, although this was not significant in one of the studies. Two out of the four studies reported on shoulder mobility where MLD combined with exercise gave better shoulder mobility for lateral arm movement (shoulder abduction) and forward flexion in the first weeks after breast cancer surgery, compared to education only (mean difference for abduction 22°; 95% confidence interval (CI) 14 to 30; mean difference for forward flexion 14°; 95% CI 7 to 22). Two of the studies on MLD reported on pain, with inconsistent results. Results on HRQoL in two studies on MLD were also contradictory. Exercise: early versus delayed start of shoulder mobilising exercisesThree studies examined early versus late start of postoperative shoulder exercises. The pooled relative risk of lymphoedema after an early start of exercises was 1.69 (95% CI 0.94 to 3.01, 3 studies, 378 participants). Shoulder forward flexion was better at one and six months follow-up for participants who started early with mobilisation exercises compared to a delayed start (two studies), but no meta-analysis could be performed due to statistical heterogeneity. There was no difference in shoulder mobility or self-reported shoulder disability at 12 months follow-up (one study). One study evaluated HRQoL and reported difference at one year follow-up (mean difference 1.6 points, 95% CI -2.14 to 5.34, on the Trial Outcome Index of the FACT-B). Two studies collected data on wound drainage volumes and only one study reported higher wound drainage volumes in the early exercise group. Exercise: resistance trainingTwo studies compared progressive resistance training to restricted activity. Resistance training after breast cancer treatment did not increase the risk of developing lymphoedema (RR 0.58; 95% CI 0.30 to 1.13, two studies, 358 participants) provided that symptoms are monitored and treated immediately if they occur. One out of the two studies measured pain where participants in the resistance training group reported pain more often at three months and six months compared to the control group. One study reported HRQoL and found no significant difference between the groups. Patient education, monitoring and early interventionOne study investigated the effects of a comprehensive outpatient follow-up programme, consisting of patient education, exercise, monitoring of lymphoedema symptoms and early intervention for lymphoedema, compared to education alone. Lymphoedema incidence was lower in the comprehensive outpatient follow-up programme (at any time point) compared to education alone (65 people). Participants in the outpatient follow-up programme had a significantly faster recovery of shoulder abduction compared to the education alone group. Based on the current available evidence, we cannot draw firm conclusions about the effectiveness of interventions containing MLD. The evidence does not indicate a higher risk of lymphoedema when starting shoulder-mobilising exercises early after surgery compared to a delayed start (i.e. seven days after surgery). Shoulder mobility (that is, lateral arm movements and forward flexion) is better in the short term when starting shoulder exercises earlier compared to later. The evidence suggests that progressive resistance exercise therapy does not increase the risk of developing lymphoedema, provided that symptoms are closely monitored and adequately treated if they occur.Given the degree of heterogeneity encountered, limited precision, and the risk of bias across the included studies, the results of this review should be interpreted with caution.

  2. Using tsunami deposits to determine the maximum depth of benthic burrowing

    PubMed Central

    Shirai, Kotaro; Murakami-Sugihara, Naoko

    2017-01-01

    The maximum depth of sediment biomixing is directly related to the vertical extent of post-depositional environmental alteration in the sediment; consequently, it is important to determine the maximum burrowing depth. This study examined the maximum depth of bioturbation in a natural marine environment in Funakoshi Bay, northeastern Japan, using observations of bioturbation structures developed in an event layer (tsunami deposits of the 2011 Tohoku-Oki earthquake) and measurements of the radioactive cesium concentrations in this layer. The observations revealed that the depth of bioturbation (i.e., the thickness of the biomixing layer) ranged between 11 and 22 cm, and varied among the sampling sites. In contrast, the radioactive cesium concentrations showed that the processing of radioactive cesium in coastal environments may include other pathways in addition to bioturbation. The data also revealed the nature of the bioturbation by the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), which is one of the important ecosystem engineers in seafloor environments. The maximum burrowing depth of E. cordatum in Funakoshi Bay was 22 cm from the seafloor surface. PMID:28854254

  3. Using tsunami deposits to determine the maximum depth of benthic burrowing.

    PubMed

    Seike, Koji; Shirai, Kotaro; Murakami-Sugihara, Naoko

    2017-01-01

    The maximum depth of sediment biomixing is directly related to the vertical extent of post-depositional environmental alteration in the sediment; consequently, it is important to determine the maximum burrowing depth. This study examined the maximum depth of bioturbation in a natural marine environment in Funakoshi Bay, northeastern Japan, using observations of bioturbation structures developed in an event layer (tsunami deposits of the 2011 Tohoku-Oki earthquake) and measurements of the radioactive cesium concentrations in this layer. The observations revealed that the depth of bioturbation (i.e., the thickness of the biomixing layer) ranged between 11 and 22 cm, and varied among the sampling sites. In contrast, the radioactive cesium concentrations showed that the processing of radioactive cesium in coastal environments may include other pathways in addition to bioturbation. The data also revealed the nature of the bioturbation by the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), which is one of the important ecosystem engineers in seafloor environments. The maximum burrowing depth of E. cordatum in Funakoshi Bay was 22 cm from the seafloor surface.

  4. Phase I/II Pilot Study of Mixed Chimerism to Treat Inherited Metabolic Disorders

    ClinicalTrials.gov

    2017-11-15

    Hurler Syndrome (MPS I); Hurler-Scheie Syndrome; Hunter Syndrome (MPS II); Sanfilippo Syndrome (MPS III); Krabbe Disease (Globoid Leukodystrophy); Metachromatic Leukodystrophy (MLD); Adrenoleukodystrophy (ALD and AMN); Sandhoff Disease; Tay Sachs Disease; Pelizaeus Merzbacher (PMD); Niemann-Pick Disease; Alpha-mannosidosis

  5. How Choice of Depth Horizon Influences the Estimated Spatial Patterns and Global Magnitude of Ocean Carbon Export Flux

    NASA Astrophysics Data System (ADS)

    Palevsky, Hilary I.; Doney, Scott C.

    2018-05-01

    Estimated rates and efficiency of ocean carbon export flux are sensitive to differences in the depth horizons used to define export, which often vary across methodological approaches. We evaluate sinking particulate organic carbon (POC) flux rates and efficiency (e-ratios) in a global earth system model, using a range of commonly used depth horizons: the seasonal mixed layer depth, the particle compensation depth, the base of the euphotic zone, a fixed depth horizon of 100 m, and the maximum annual mixed layer depth. Within this single dynamically consistent model framework, global POC flux rates vary by 30% and global e-ratios by 21% across different depth horizon choices. Zonal variability in POC flux and e-ratio also depends on the export depth horizon due to pronounced influence of deep winter mixing in subpolar regions. Efforts to reconcile conflicting estimates of export need to account for these systematic discrepancies created by differing depth horizon choices.

  6. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Poletika, T. M., E-mail: poletm@ispms.tsc.ru; Girsova, S. L., E-mail: llm@ispms.tsc.ru; Meisner, L. L., E-mail: girs@ispms.tsc.ru

    The structure of the surface and near-surface layers of single crystals of NiTi, differently oriented relative to the direction of ion beam treatment was investigated. The role of the crystallographic orientation in formation of structure of surface layers after ion-plasma alloying was revealed. It was found that the orientation effects of selective sputtering and channeling determine the thickness of the oxide and amorphous layers, the depth of penetration of ions and impurities, the distribution of Ni with depth.

  7. First-Grade Predictors of Mathematical Learning Disability: A Latent Class Trajectory Analysis

    PubMed Central

    Geary, David C.; Bailey, Drew H.; Littlefield, Andrew; Wood, Phillip; Hoard, Mary K.; Nugent, Lara

    2009-01-01

    Kindergarten to 3rd grade mathematics achievement scores from a prospective study of mathematical development were subjected to latent growth trajectory analyses (n = 306). The four corresponding classes included children with mathematical learning disability (MLD, 6% of sample), and low (LA, 50%), typically (TA, 39%) and high (HA, 5%) achieving children. The groups were administered a battery of intelligence (IQ), working memory, and mathematical-cognition measures in 1st grade. The children with MLD had general deficits in working memory and IQ, and potentially more specific deficits on measures of number sense. The LA children did not have working memory or IQ deficits, but showed moderate deficits on these number sense measures and for addition fact retrieval. The distinguishing features of the HA children were a strong visuospatial working memory, a strong number sense, and frequent use of memory-based processes to solve addition problems. Implications for the early identification of children at risk for poor mathematics achievement are discussed. PMID:20046817

  8. Mid-Latitude Disturbances - Triggered by Hurricane Dennis?

    NASA Astrophysics Data System (ADS)

    Earle, G. D.; Bishop, R. L.

    2001-05-01

    Midlatitude irregularities in F-region electron density have been previously observed in-situ by the Atmosphere Explorer-E satellite [Hanson and Johnson, 1992]. These authors noted the similarity of the irregularities to equatorial spread-F, which is commonly observed at much lower latitudes (within 20 degrees of the magnetic equator). They coined the term midlatitude disturbances (MLDs), and postulated that the irregularities resulted from the Perkins instability in a region where the east-west velocities of the ions differs from that of the neutrals. We present ionosonde observations of range spread-F made over Wallops Island, VA that may show signatures of similar MLD events. The data show evidence of an apparent correlation between the occurrence of the irregularities and the passage of hurricane Dennis over the magnetic meridian of Wallops Island. Based on this evidence, we examine the possibility that the Perkins instability and/or MLD events can be triggered by gravity waves spawned by the hurricane. Reference: Hanson, W.B., and F.S. Johnson, Planet. Space Sci., vol. 40, pp. 1615-1630, 1992.

  9. Similarity is not enough: Tipping points of Ebola Zaire mortalities

    NASA Astrophysics Data System (ADS)

    Phillips, J. C.

    2015-06-01

    In early 2014 an outbreak of a slightly mutated Zaire Ebola subtype appeared in West Africa which is less virulent than 1976 and 1994 strains. The numbers of cases per year appear to be ∼1000 times larger than the earlier strains, suggesting a greatly enhanced transmissibility. Although the fraction of the 2014 spike glycoprotein mutations is very small (∼3%), the mortality is significantly reduced, while the transmission appears to have increased strongly. Bioinformatic scaling had previously shown similar inversely correlated trends in virulence and transmission in N1 (H1N1) and N2 (H3N2) influenza spike glycoprotein mutations. These trends appear to be related to various external factors (migration, availability of pure water, and vaccination programs). The molecular mechanisms for Ebola's mutational response involve mainly changes in the disordered mucin-like domain (MLD) of its spike glycoprotein amino acids. The MLD has been observed to form the tip of an oligomeric amphiphilic wedge that selectively pries apart cell-cell interfaces via an oxidative mechanism.

  10. Associated factors of radiation pneumonitis induced by precise radiotherapy in 186 elderly patients with esophageal cancer.

    PubMed

    Cui, Zhen; Tian, Ye; He, Bin; Li, Hongwei; Li, Duojie; Liu, Jingjing; Cai, Hanfei; Lou, Jianjun; Jiang, Hao; Shen, Xueming; Peng, Kaigui

    2015-01-01

    Radiation pneumonitis is one of the most severe complications of esophageal cancer. To explore the factors correlated to radiation pneumonitis induced by precise radiotherapy for elderly patients with esophageal cancer. The retrospective analysis was used to collect clinical data from 186 elderly patients with esophageal cancer. The incidence of radiation pneumonitis was observed, followed by statistical analysis through ANVON or multiple regression analysis. 27 in 186 cases of esophageal cancer suffered from radiation pneumonitis, with incidence of 14.52%. The single factor analysis showed that, Karnofsky performance status (KPS) score, chronic obstructive pulmonary disease, concurrent chemoradiotherapy, gross tumor volume (GTV) dose, lung V20, mean lung dose (MLD) and planning target volume (PTV) were associated with radiation pneumonitis. The logistic regression analysis indicated that, concurrent chemoradiotherapy, GTV dose, lung V20 and PTV were the independent factors of radiation pneumonitis. The concurrent chemoradiotherapy, GTV dose, lung V20, MLD and PTV are the major risk factors of radiation pneumonitis for elderly patients with esophageal cancer.

  11. Hybrid Model Predictive Control for Sequential Decision Policies in Adaptive Behavioral Interventions.

    PubMed

    Dong, Yuwen; Deshpande, Sunil; Rivera, Daniel E; Downs, Danielle S; Savage, Jennifer S

    2014-06-01

    Control engineering offers a systematic and efficient method to optimize the effectiveness of individually tailored treatment and prevention policies known as adaptive or "just-in-time" behavioral interventions. The nature of these interventions requires assigning dosages at categorical levels, which has been addressed in prior work using Mixed Logical Dynamical (MLD)-based hybrid model predictive control (HMPC) schemes. However, certain requirements of adaptive behavioral interventions that involve sequential decision making have not been comprehensively explored in the literature. This paper presents an extension of the traditional MLD framework for HMPC by representing the requirements of sequential decision policies as mixed-integer linear constraints. This is accomplished with user-specified dosage sequence tables, manipulation of one input at a time, and a switching time strategy for assigning dosages at time intervals less frequent than the measurement sampling interval. A model developed for a gestational weight gain (GWG) intervention is used to illustrate the generation of these sequential decision policies and their effectiveness for implementing adaptive behavioral interventions involving multiple components.

  12. In vivo confocal Raman microscopic determination of depth profiles of the stratum corneum lipid organization influenced by application of various oils.

    PubMed

    Choe, ChunSik; Schleusener, Johannes; Lademann, Jürgen; Darvin, Maxim E

    2017-08-01

    The intercellular lipids (ICL) of stratum corneum (SC) play an important role in maintaining the skin barrier function. The lateral and lamellar packing order of ICL in SC is not homogenous, but rather depth-dependent. This study aimed to analyze the influence of the topically applied mineral-derived (paraffin and petrolatum) and plant-derived (almond oil and jojoba oil) oils on the depth-dependent ICL profile ordering of the SC in vivo. Confocal Raman microscopy (CRM), a unique tool to analyze the depth profile of the ICL structure non-invasively, is employed to investigate the interaction between oils and human SC in vivo. The results show that the response of SC to oils' permeation varies in the depths. All oils remain in the upper layers of the SC (0-20% of SC thickness) and show predominated differences of ICL ordering from intact skin. In these depths, skin treated with plant-derived oils shows more disordered lateral and lamellar packing order of ICL than intact skin (p<0.05). In the intermediate layers of SC (30-50% of SC thickness), the oils do not influence the lateral packing order of SC ICL (p>0.1), except plant-derived oils at the depth 30% of SC thickness. In the deeper layers of the SC (60-100% of SC thickness), no difference between ICL lateral packing order of the oil-treated and intact skin can be observed, except that at the depths of 70-90% of the SC thickness, where slight changes with more disorder states are measured for plant-derived oil treated skin (p<0.1), which could be explained by the penetration of free fatty acid fractions in the deep-located SC areas. Both oil types remain in the superficial layers of the SC (0-20% of the SC thickness). Skin treated with mineral- and plant-derived oils shows significantly higher disordered lateral and lamellar packing order of ICL in these layers of the SC compared to intact skin. Plant-derived oils significantly changed the ICL ordering in the depths of 30% and 70-90% of the SC thickness, which is likely due to the penetration of free fatty acids in the deeper layers of the SC. Copyright © 2017 Japanese Society for Investigative Dermatology. Published by Elsevier B.V. All rights reserved.

  13. Depth profiling of mechanical degradation of PV backsheets after UV exposure

    NASA Astrophysics Data System (ADS)

    Gu, Xiaohong; Krommenhoek, Peter J.; Lin, Chiao-Chi; Yu, Li-Chieh; Nguyen, Tinh; Watson, Stephanie S.

    2015-09-01

    Polymeric multilayer backsheets protect the photovoltaic modules from damage of moisture and ultraviolet (UV) while providing electrical insulation. Due to the multilayer structures, the properties of the inner layers of the backsheets, including their interfaces, during weathering are not well known. In this study, a commercial type of PPE (polyethylene terephthalate (PET)/PET/ethylene vinyl acetate (EVA)) backsheet films was selected as a model system for a depth profiling study of mechanical properties of a backsheet film during UV exposure. The NIST SPHERE (Simulated Photodegradation via High Energy Radiant Exposure) was used for the accelerated laboratory exposure of the materials with UV at 85°C and two relative humidities (RH) of 5 % (dry) and 60 % (humid). Cryomicrotomy was used to obtain cross-sectional PPE samples. Mechanical depth profiling of the cross-sections of aged and unaged samples was conducted by nanoindentation, and a peak-force based quantitative nanomechanical atomic force microscopy (QNM-AFM) mapping techniquewas used to investigate the microstructure and adhesion properties of the adhesive tie layers. The nanoindentation results show the stiffening of the elastic modulus in the PET outer and pigmented EVA layers. From QNM-AFM, the microstructures and adhesion properties of the adhesive layers between PET outer and core layers and between PET core and EVA inner layers are revealed and found to degrade significantly after aging under humidity environment. The results from mechanical depth profiling of the PPE backsheet are further related to the previous chemical depth profiling of the same material, providing new insights into the effects of accelerated UV and humidity on the degradation of multilayer backsheet.

  14. Cerro Prieto reinjection tests: studies of a multilayer system

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tsang, C.F.; Mangold, D.C.; Doughty, C.

    1981-01-01

    The response of the two-reservoir system to reinjection was modeled assuming a semi-realistic vertical distribution of materials. Different depths of production and reinjection, and the possible influence of an intervening layer of lower permeability between these two depths were incorporated into the model. Reinjection at different depths and at different flowrates was studied in order to analyze the thermohydrological responses of this two-layered reservoir system to a number of possible reinjection schemes.

  15. Deriving depths of deep chlorophyll maximum and water inherent optical properties: A regional model

    NASA Astrophysics Data System (ADS)

    Xiu, Peng; Liu, Yuguang; Li, Gang; Xu, Qing; Zong, Haibo; Rong, Zengrui; Yin, Xiaobin; Chai, Fei

    2009-10-01

    The Bohai Sea is a semi-enclosed inland sea with case-2 waters near the coast. A comprehensive set of optical data was collected during three cruises in June, August, and September 2005 in the Bohai Sea. The vertical profile measurements, such as chlorophyll concentration, water turbidity, downwelling irradiance, and diffuse attenuation coefficient, showed that the Bohai Sea was vertically stratified with a relative clear upper layer superimposed on a turbid lower layer. The upper layer was found to correspond to the euphotic zone and the deep chlorophyll maximum (DCM) occurs at the base of this layer. By tuning a semi-analytical model (Lee et al., 1998, 1999) for the Bohai Sea, we developed a method to derive water inherent optical properties and the depth of DCM from above-surface measurements. Assuming a 'fake' bottom in the stratified water, this new method retrieves the 'fake' bottom depth, which is highly correlated with the DCM depth. The average relative error between derived and measured values is 33.9% for phytoplankton absorption at 440 nm, 25.6% for colored detrital matter (detritus plus gelbstoff) absorption at 440 nm, and 24.2% for the DCM depth. This modified method can retrieve water inherent optical properties and monitor the depth of DCM in the Bohai Sea, and the method is also applicable to other stratified waters.

  16. Determining the influential depth for surface reflectance of sediment by BRDF measurements.

    PubMed

    Zhang, H; Voss, K; Reid, R

    2003-10-20

    We measure the Bi-directional reflectance distribution function (BRDF) of ooid sand layers with three particle size distributions (0.5-1mm, 0.25-0.5mm and 0.125-0.25mm) and layer thicknesses on a reflecting mirror to determine the influential depth in the optical region at wavelengths of 658 nm (red), 570 nm (green) and 457 nm (blue). The hemispherical reflectance (albedo) was used as an indicator of BRDF changes between different layers. Measurements are carried out on both dry and water wetted grains. The results indicate that for both dry and wet and all size distributions, the influential depth is at most 2mm.

  17. Community structure of copepods in the oceanic and neritic waters off Adélie and George V Land, East Antarctica, during the austral summer of 2008

    NASA Astrophysics Data System (ADS)

    Tachibana, Aiko; Watanabe, Yuko; Moteki, Masato; Hosie, Graham W.; Ishimaru, Takashi

    2017-06-01

    Copepods are one of the most important components of the Southern Ocean food web, and are widely distributed from surface to deeper waters. We conducted discrete depth sampling to clarify the community structure of copepods from the epi- to bathypelagic layers of the oceanic and neritic waters off Adélie and George V Land, East Antarctica, in the austral summer of 2008. Notably high diversity and species numbers were observed in the meso- and bathypelagic layers. Cluster analysis based on the similarity of copepod communities identified seven cluster groups, which corresponded well with water masses. In the epi- and upper- mesopelagic layers of the oceanic zone, the SB (Southern Boundary of the Antarctic Circumpolar Current) divided copepod communities. Conversely, in the lower meso- and bathypelagic layers (500-2000 m depth), communities were consistent across the SB. In these layers, the distributions of copepod species were separated by habitat depth ranges and feeding behaviour. The different food webs occur in the epipelagic layer with habitat segregation by zooplankton in their horizontal distribution ranges.

  18. Convection in superposed fluid and porous layers

    NASA Technical Reports Server (NTRS)

    Chen, Falin; Chen, C. F.

    1992-01-01

    Thermal convection due to heating from below in a porous layer underlying a fluid layer has been analyzed using the Navier-Stokes equations for the fluid layers and the extended Darcy equation (including Brinkman and Forchheimer terms) for the porous layer. The flow is assumed to be two-dimensional and periodic in the horizontal direction. The numerical scheme used is a combined Galerkin and finite-difference method, and appropriate boundary conditions are applied at the interface. Results have been obtained for depth ratios of 0, 0.1, 0.2, 0.5, and 1.0, where this ratio is defined as the ratio of the thickness of the fluid layer to that of the porous layer. For the depth ratio of 0.1, the convection is dominated by the porous layer, similar to the situation at onset, even though the Rayleigh number for the fluid layer is well into the supercritical regime.

  19. Hardness and microstructure analysis of damaged gear caused by adhesive wear

    NASA Astrophysics Data System (ADS)

    Mahendra, Rizky Budi; Nugroho, Sri; Ismail, Rifky

    2018-03-01

    This study was a result from research on repairing project of damaged elevator gear box. The objective of this research is to analyze the failure part on elevator gearbox at flourmill factory. The equipment was damaged after one year installed and running on factory. Severe wear was occurred on high speed helical gear. These helical gear was one of main part of elevator gearbox in flour mill manufacture. Visually, plastic deformation didn't occurred and not visible on the failure helical gear shaft. Some test would be performed to check the chemical composition, microstructure and hardness of failure helical gear. The material of failure helical gear shaft was a medium carbon steel alloy. The microstructure was showed a martensitic phase formed on the surface to the center area of gear shaft. Otherwise, the depth of hardness layer slight formed on surface and lack depth of hardness layer was a main trigger of severe wear. It was not enough to resist wear due to friction caused by rolling and sliding on surface between high speed gear and low speed gear. Enhancement of hardness layer on surface and depth of hardness layer will make the component has more long life time. Furthermore, to perform next research is needed to analyze the reliability of enhanced hardness on layer and depth of hardness layer on helical gear shaft.

  20. In vivo layer visualization of rat olfactory bulb by a swept source optical coherence tomography and its confirmation through electrocoagulation and anatomy

    PubMed Central

    Watanabe, Hideyuki; Rajagopalan, Uma Maheswari; Nakamichi, Yu; Igarashi, Kei M.; Madjarova, Violeta Dimitrova; Kadono, Hirofumi; Tanifuji, Manabu

    2011-01-01

    Here, we report in vivo 3-D visualization of the layered organization of a rat olfactory bulb (OB) by a swept source optical coherence tomography (SS-OCT). The SS-OCT operates at a wavelength of 1334 nm with respective theoretical depth and lateral resolutions of 6.7 μm and 15.4 μm in air and hence it is possible to get a 3D structural map of OB in vivo at the micron level resolution with millimeter-scale imaging depth. Up until now, with methods such as MRI, confocal microscopy, OB depth structure in vivo had not been clearly visualized as these do not satisfy the criterion of simultaneously providing micron-scale spatial resolution and imaging up to a few millimeter in depth. In order to confirm the OB’s layered organization revealed by SS-OCT, we introduced the technique of electrocoagulation to make landmarks across the layered structure. To our knowledge this is such a first study that combines electrocoagulation and OCT in vivo of rat OB. Our results confirmed the layered organization of OB, and moreover the layers were clearly identified by electrocoagulation landmarks both in the OCT structural and anatomical slice images. We expect such a combined study is beneficial for both OCT and neuroscience fields. PMID:21833364

  1. BPI700-Fc gamma1(700) chimeric gene expression and its protective effect in a mice model of the lethal E. coli infection.

    PubMed

    Kong, Qing-li; Guan, Yuan-zhi; Jing, Xue-fang; Li, Chen; Guo, Xiang-hua; Lü, Zhe; An, Yun-qing

    2006-03-20

    Infections caused by gram-negative bacteria (GNB) often lead to high mortality in common clinical settings. The effect of traditional antibiotic therapy is hindered by drug-resistant bacteria and unneutralizable endotoxin. Few effective methods can protect high risk patients from bacterial infection. This study explored the protection of adeno-associated virus 2 (AAV2)-bacteriacidal permeability increasing protein 700 (BPI(700))-fragment crystallizable gamma one 700 (Fc gamma1(700)) chimeric gene transferred mice against the minimal lethal dose (MLD) of E. coli and application of gene therapy for bacterial infection. After AAV2-BPI(700)-Fc gamma1(700) virus transfection, dot blotting and Western blotting were used to detect the target gene products in Chinese hamster ovary-K1 cells (CHO-K1cells). Reverse transcription-polymerase chain reaction and immunohistochemical assay were carried out to show the target gene expression in mice. Modified BPI-enzyme linked immunosorbent assay was used to identify the target gene products in murine serum. The protection of BPI(700)-Fc gamma1(700) gene transferred mice was examined by survival rate after MLD E. coli challenge. Colony forming unit (CFU) count, limulus amebocyte lysate kit and cytokine kit were used to quantify the bacteria, the level of endotoxin, and proinflammatory cytokine. BPI(1-199)-Fc gamma1 protein was identified in the CHO-K1 cell culture supernatant, injected muscles and serum of the gene transferred mice. After MLD E. coli challenge, the survival rate of AAV2-BPI(700)-Fc gamma1(700) gene transferred mice (36.7%) was significantly higher than that of AAV2-enhanced green fluorescent protein (AAV2-EGFP) gene transferred mice (3.3%) and PBS control mice (5.6%). The survival rate of AAV2-BPI(700)-Fc gamma1(700) gene transferred mice treated with cefuroxime sodium was 65.0%. The bacterium number in main viscera, the levels of endotoxin and proinflammatory cytokine (tumor necrosis factor-alpha and interleukin-1beta) in serum of the AAV2-BPI(700)-Fc gamma1(700) gene transferred mice were markedly lower than that of PBS control mice (P < 0.01). AAV2-BPI(700)-Fc gamma1(700) gene transferred mice can resist MLD E. coli infection through expressing BPI(1-199)-Fc gamma1 protein. Our findings suggested that AAV2 mediated BPI(700)-Fc gamma1(700) gene delivery could be used for protection and treatment of clinical GNB infection in high-risk individuals.

  2. Soil thermal dynamics, snow cover, and frozen depth under five temperature treatments in an ombrotrophic bog: Constrained forecast with data assimilation: Forecast With Data Assimilation

    DOE PAGES

    Huang, Yuanyuan; Jiang, Jiang; Ma, Shuang; ...

    2017-08-18

    We report that accurate simulation of soil thermal dynamics is essential for realistic prediction of soil biogeochemical responses to climate change. To facilitate ecological forecasting at the Spruce and Peatland Responses Under Climatic and Environmental change site, we incorporated a soil temperature module into a Terrestrial ECOsystem (TECO) model by accounting for surface energy budget, snow dynamics, and heat transfer among soil layers and during freeze-thaw events. We conditioned TECO with detailed soil temperature and snow depth observations through data assimilation before the model was used for forecasting. The constrained model reproduced variations in observed temperature from different soil layers,more » the magnitude of snow depth, the timing of snowfall and snowmelt, and the range of frozen depth. The conditioned TECO forecasted probabilistic distributions of soil temperature dynamics in six soil layers, snow, and frozen depths under temperature treatments of +0.0, +2.25, +4.5, +6.75, and +9.0°C. Air warming caused stronger elevation in soil temperature during summer than winter due to winter snow and ice. And soil temperature increased more in shallow soil layers in summer in response to air warming. Whole ecosystem warming (peat + air warmings) generally reduced snow and frozen depths. The accuracy of forecasted snow and frozen depths relied on the precision of weather forcing. Uncertainty is smaller for forecasting soil temperature but large for snow and frozen depths. Lastly, timely and effective soil thermal forecast, constrained through data assimilation that combines process-based understanding and detailed observations, provides boundary conditions for better predictions of future biogeochemical cycles.« less

  3. Controlling dental enamel-cavity ablation depth with optimized stepping parameters along the focal plane normal using a three axis, numerically controlled picosecond laser.

    PubMed

    Yuan, Fusong; Lv, Peijun; Wang, Dangxiao; Wang, Lei; Sun, Yuchun; Wang, Yong

    2015-02-01

    The purpose of this study was to establish a depth-control method in enamel-cavity ablation by optimizing the timing of the focal-plane-normal stepping and the single-step size of a three axis, numerically controlled picosecond laser. Although it has been proposed that picosecond lasers may be used to ablate dental hard tissue, the viability of such a depth-control method in enamel-cavity ablation remains uncertain. Forty-two enamel slices with approximately level surfaces were prepared and subjected to two-dimensional ablation by a picosecond laser. The additive-pulse layer, n, was set to 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70. A three-dimensional microscope was then used to measure the ablation depth, d, to obtain a quantitative function relating n and d. Six enamel slices were then subjected to three dimensional ablation to produce 10 cavities, respectively, with additive-pulse layer and single-step size set to corresponding values. The difference between the theoretical and measured values was calculated for both the cavity depth and the ablation depth of a single step. These were used to determine minimum-difference values for both the additive-pulse layer (n) and single-step size (d). When the additive-pulse layer and the single-step size were set 5 and 45, respectively, the depth error had a minimum of 2.25 μm, and 450 μm deep enamel cavities were produced. When performing three-dimensional ablating of enamel with a picosecond laser, adjusting the timing of the focal-plane-normal stepping and the single-step size allows for the control of ablation-depth error to the order of micrometers.

  4. Soil thermal dynamics, snow cover, and frozen depth under five temperature treatments in an ombrotrophic bog: Constrained forecast with data assimilation: Forecast With Data Assimilation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Huang, Yuanyuan; Jiang, Jiang; Ma, Shuang

    We report that accurate simulation of soil thermal dynamics is essential for realistic prediction of soil biogeochemical responses to climate change. To facilitate ecological forecasting at the Spruce and Peatland Responses Under Climatic and Environmental change site, we incorporated a soil temperature module into a Terrestrial ECOsystem (TECO) model by accounting for surface energy budget, snow dynamics, and heat transfer among soil layers and during freeze-thaw events. We conditioned TECO with detailed soil temperature and snow depth observations through data assimilation before the model was used for forecasting. The constrained model reproduced variations in observed temperature from different soil layers,more » the magnitude of snow depth, the timing of snowfall and snowmelt, and the range of frozen depth. The conditioned TECO forecasted probabilistic distributions of soil temperature dynamics in six soil layers, snow, and frozen depths under temperature treatments of +0.0, +2.25, +4.5, +6.75, and +9.0°C. Air warming caused stronger elevation in soil temperature during summer than winter due to winter snow and ice. And soil temperature increased more in shallow soil layers in summer in response to air warming. Whole ecosystem warming (peat + air warmings) generally reduced snow and frozen depths. The accuracy of forecasted snow and frozen depths relied on the precision of weather forcing. Uncertainty is smaller for forecasting soil temperature but large for snow and frozen depths. Lastly, timely and effective soil thermal forecast, constrained through data assimilation that combines process-based understanding and detailed observations, provides boundary conditions for better predictions of future biogeochemical cycles.« less

  5. Bottom Penetration at Shallow Grazing Angles II

    DTIC Science & Technology

    1992-06-19

    Millwater , "Wave Reflection from a Sediment Layer with Depth-Dependent Properties," J. Acoust. Soc. Am. 77, 1781- 1788 (1985). 35 8. N. P. Chotiros, ’High...Acoust. Soc. Am. 8B1 S131 (1990). 12. M. Stern, A. Bedford, and H. R. Millwater , "Wave Reflection from a Sediment Layer with Depth-Dependent

  6. Hemodynamic monitoring in different cortical layers with a single fiber optical system

    NASA Astrophysics Data System (ADS)

    Yu, Linhui; Noor, M. Sohail; Kiss, Zelma H. T.; Murari, Kartikeya

    2018-02-01

    Functional monitoring of highly-localized deep brain structures is of great interest. However, due to light scattering, optical methods have limited depth penetration or can only measure from a large volume. In this research, we demonstrate continuous measurement of hemodynamics in different cortical layers in response to thalamic deep brain stimulation (DBS) using a single fiber optical system. A 200-μm-core-diameter multimode fiber is used to deliver and collect light from tissue. The fiber probe can be stereotaxically implanted into the brain region of interest at any depth to measure the di use reflectance spectra from a tissue volume of 0.02-0.03 mm3 near the fiber tip. Oxygenation is then extracted from the reflectance spectra using an algorithm based on Monte Carlo simulations. Measurements were performed on the surface (cortical layer I) and at 1.5 mm depth (cortical layer VI) of the motor cortex in anesthetized rats with thalamic DBS. Preliminary results revealed the oxygenation changes in response to DBS. Moreover, the baseline as well as the stimulus-evoked change in oxygenation were different at the two depths of cortex.

  7. Mechanical-structural investigation of chemical strengthening aluminosilicate glass through introducing phosphorus pentoxide

    NASA Astrophysics Data System (ADS)

    Zeng, Huidan; Wang, Ling; Ye, Feng; Yang, Bin; Chen, Jianding; Chen, Guorong; Sun, Luyi

    2016-11-01

    Chemical strengthening of aluminosilicate glasses through K+-Na+ ion exchange has attracted tremendous attentions because of the accelerating demand for high strength and damage resistance glasses. However, a paramount challenge still exists to fabricate glasses with a higher strength and greater depth of ion-exchange layer. Herein, aluminosilicate glasses with different contents of P2O5 were prepared and the influence of P2O5 on the increased compressive stress and depth of ion-exchange layer was investigated by micro-Raman technique. It was noticed that the hardness, compressive stress, as well as the depth of ion-exchange layer substantially increased with an increasing concentration of P2O5 varied from 1 to 7 mol%. The obtained micro-Raman spectra confirmed the formation of relatively depolymerized silicate anions that accelerated the ion exchange. Phosphorus containing aluminosilicate glasses with a lower polymerization degree exhibited a higher strength and deeper depth of ion-exchange layer, which suggests that the phosphorus containing aluminosilicate glasses have promising applications in flat panel displays, windshields, and wafer sealing substrates.

  8. Ciliate diversity and distribution patterns in the sediments of a seamount and adjacent abyssal plains in the tropical Western Pacific Ocean.

    PubMed

    Zhao, Feng; Filker, Sabine; Stoeck, Thorsten; Xu, Kuidong

    2017-09-12

    Benthic ciliates and the environmental factors shaping their distribution are far from being completely understood. Likewise, deep-sea systems are amongst the least understood ecosystems on Earth. In this study, using high-throughput DNA sequencing, we investigated the diversity and community composition of benthic ciliates in different sediment layers of a seamount and an adjacent abyssal plain in the tropical Western Pacific Ocean with water depths ranging between 813 m and 4566 m. Statistical analyses were used to assess shifts in ciliate communities across vertical sediment gradients and water depth. Nine out of 12 ciliate classes were detected in the different sediment samples, with Litostomatea accounting for the most diverse group, followed by Plagiopylea and Oligohymenophorea. The novelty of ciliate genetic diversity was extremely high, with a mean similarity of 93.25% to previously described sequences. On a sediment depth gradient, ciliate community structure was more similar within the upper sediment layers (0-1 and 9-10 cm) compared to the lower sediment layers (19-20 and 29-30 cm) at each site. Some unknown ciliate taxa which were absent from the surface sediments were found in deeper sediments layers. On a water depth gradient, the proportion of unique OTUs was between 42.2% and 54.3%, and that of OTUs shared by all sites around 14%. However, alpha diversity of the different ciliate communities was relatively stable in the surface layers along the water depth gradient, and about 78% of the ciliate OTUs retrieved from the surface layer of the shallowest site were shared with the surface layers of sites deeper than 3800 m. Correlation analyses did not reveal any significant effects of measured environmental factors on ciliate community composition and structure. We revealed an obvious variation in ciliate community along a sediment depth gradient in the seamount and the adjacent abyssal plain and showed that water depth is a less important factor shaping ciliate distribution in deep-sea sediments unlike observed for benthic ciliates in shallow seafloors. Additionally, an extremely high genetic novelty of ciliate diversity was found in these habitats, which points to a hot spot for the discovery of new ciliate species.

  9. Mixed layer warming-deepening in the Mediterranean Sea and its effect on the marine environment

    NASA Astrophysics Data System (ADS)

    Rivetti, Irene; Boero, Ferdinando; Fraschetti, Simonetta; Zambianchi, Enrico; Lionello, Piero

    2015-04-01

    This work aims at investigating the evolution of the ocean mixed layer in the Mediterranean Sea and linking it to the occurrence of mass mortalities of benthic invertebrates. The temporal evolution of selected parameters describing the mixed layer and the seasonal thermocline is provided for the whole Mediterranean Sea for spring, summer and autumn and for the period 1945-2011. For this analysis all temperature profiles collected in the basin with bottles, Mechanical Bathy-Thermographs (MBT), eXpendable Bathy-Thermographs (XBT), and Conductivity-Temperature-Depth (CTD) have been used (166,990). These data have been extracted from three public sources: the MEDAR-MEDATLAS, the World Ocean Database 2013 and the MFS-VOS program. Five different methods for estimating the mixed layer depth are compared using temperature profiles collected at the DYFAMED station in the Ligurian Sea and one method, the so-called three-segment method, has been selected for a systematic analysis of the evolution of the uppermost part of the whole Mediterranean Sea. This method approximates the upper water column with three segments representing mixed layer, thermocline and deep layer and has shown to be the most suitable method for capturing the mixed layer depth for most shapes of temperature profiles. Mass mortalities events of benthic invertebrates have been identified by an extensive search of all data bases in ISI Web of Knowledge considering studies published from 1945 to 2011. Studies reporting the geographical coordinates, the timing of the events, the species involved and the depth at which signs of stress occurred have been considered. Results show a general increase of thickness and temperature of the mixed layer, deepening and cooling of the thermocline base in summer and autumn. Possible impacts of these changes are mass mortalities events of benthic invertebrates that have been documented since 1983 mainly in summer and autumn. It is also shown that most mass mortalities occurred in months with anomalously high mixed layer depth temperature leading to the conclusion that warming of upper Mediterranean Sea has allowed interannual temperature variability to reach environmental conditions beyond the thermal tolerance of some species.

  10. Meta-metallic coils and resonators: Methods for high Q-value resonant geometries

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mett, R. R.; Department of Physics and Chemistry, Milwaukee School of Engineering, Milwaukee, Wisconsin 53202; Sidabras, J. W.

    A novel method of decreasing ohmic losses and increasing Q-value in metallic resonators at high frequencies is presented. The method overcomes the skin-depth limitation of rf current flow cross section. The method uses layers of conductive foil of thickness less than a skin depth and capacitive gaps between layers. The capacitive gaps can substantially equalize the rf current flowing in each layer, resulting in a total cross-sectional dimension for rf current flow many times larger than a skin depth. Analytic theory and finite-element simulations indicate that, for a variety of structures, the Q-value enhancement over a single thick conductor approachesmore » the ratio of total conductor thickness to skin depth if the total number of layers is greater than one-third the square of the ratio of total conductor thickness to skin depth. The layer number requirement is due to counter-currents in each foil layer caused by the surrounding rf magnetic fields. We call structures that exhibit this type of Q-enhancement “meta-metallic.” In addition, end effects due to rf magnetic fields wrapping around the ends of the foils can substantially reduce the Q-value for some classes of structures. Foil structures with Q-values that are substantially influenced by such end effects are discussed as are five classes of structures that are not. We focus particularly on 400 MHz, which is the resonant frequency of protons at 9.4 T. Simulations at 400 MHz are shown with comparison to measurements on fabricated structures. The methods and geometries described here are general for magnetic resonance and can be used at frequencies much higher than 400 MHz.« less

  11. Meta-metallic coils and resonators: Methods for high Q-value resonant geometries

    PubMed Central

    Mett, R. R.; Hyde, J. S.

    2016-01-01

    A novel method of decreasing ohmic losses and increasing Q-value in metallic resonators at high frequencies is presented. The method overcomes the skin-depth limitation of rf current flow cross section. The method uses layers of conductive foil of thickness less than a skin depth and capacitive gaps between layers. The capacitive gaps can substantially equalize the rf current flowing in each layer, resulting in a total cross-sectional dimension for rf current flow many times larger than a skin depth. Analytic theory and finite-element simulations indicate that, for a variety of structures, the Q-value enhancement over a single thick conductor approaches the ratio of total conductor thickness to skin depth if the total number of layers is greater than one-third the square of the ratio of total conductor thickness to skin depth. The layer number requirement is due to counter-currents in each foil layer caused by the surrounding rf magnetic fields. We call structures that exhibit this type of Q-enhancement “meta-metallic.” In addition, end effects due to rf magnetic fields wrapping around the ends of the foils can substantially reduce the Q-value for some classes of structures. Foil structures with Q-values that are substantially influenced by such end effects are discussed as are five classes of structures that are not. We focus particularly on 400 MHz, which is the resonant frequency of protons at 9.4 T. Simulations at 400 MHz are shown with comparison to measurements on fabricated structures. The methods and geometries described here are general for magnetic resonance and can be used at frequencies much higher than 400 MHz. PMID:27587143

  12. Vertical distribution, composition and migratory patterns of acoustic scattering layers in the Canary Islands

    NASA Astrophysics Data System (ADS)

    Ariza, A.; Landeira, J. M.; Escánez, A.; Wienerroither, R.; Aguilar de Soto, N.; Røstad, A.; Kaartvedt, S.; Hernández-León, S.

    2016-05-01

    Diel vertical migration (DVM) facilitates biogeochemical exchanges between shallow waters and the deep ocean. An effective way of monitoring the migrant biota is by acoustic observations although the interpretation of the scattering layers poses challenges. Here we combine results from acoustic observations at 18 and 38 kHz with limited net sampling in order to unveil the origin of acoustic phenomena around the Canary Islands, subtropical northeast Atlantic Ocean. Trawling data revealed a high diversity of fishes, decapods and cephalopods (152 species), although few dominant species likely were responsible for most of the sound scattering in the region. We identified four different acoustic scattering layers in the mesopelagic realm: (1) at 400-500 m depth, a swimbladder resonance phenomenon at 18 kHz produced by gas-bearing migrant fish such as Vinciguerria spp. and Lobianchia dofleini, (2) at 500-600 m depth, a dense 38 kHz layer resulting primarily from the gas-bearing and non-migrant fish Cyclothone braueri, and to a lesser extent, from fluid-like migrant fauna also inhabiting these depths, (3) between 600 and 800 m depth, a weak signal at both 18 and 38 kHz ascribed either to migrant fish or decapods, and (4) below 800 m depth, a weak non-migrant layer at 18 kHz which was not sampled. All the dielly migrating layers reached the epipelagic zone at night, with the shorter-range migrations moving at 4.6 ± 2.6 cm s - 1 and the long-range ones at 11.5 ± 3.8 cm s - 1. This work reduces uncertainties interpreting standard frequencies in mesopelagic studies, while enhances the potential of acoustics for future research and monitoring of the deep pelagic fauna in the Canary Islands.

  13. Scale effects in wind tunnel modeling of an urban atmospheric boundary layer

    NASA Astrophysics Data System (ADS)

    Kozmar, Hrvoje

    2010-03-01

    Precise urban atmospheric boundary layer (ABL) wind tunnel simulations are essential for a wide variety of atmospheric studies in built-up environments including wind loading of structures and air pollutant dispersion. One of key issues in addressing these problems is a proper choice of simulation length scale. In this study, an urban ABL was reproduced in a boundary layer wind tunnel at different scales to study possible scale effects. Two full-depth simulations and one part-depth simulation were carried out using castellated barrier wall, vortex generators, and a fetch of roughness elements. Redesigned “Counihan” vortex generators were employed in the part-depth ABL simulation. A hot-wire anemometry system was used to measure mean velocity and velocity fluctuations. Experimental results are presented as mean velocity, turbulence intensity, Reynolds stress, integral length scale of turbulence, and power spectral density of velocity fluctuations. Results suggest that variations in length-scale factor do not influence the generated ABL models when using similarity criteria applied in this study. Part-depth ABL simulation compares well with two full-depth ABL simulations indicating the truncated vortex generators developed for this study can be successfully employed in urban ABL part-depth simulations.

  14. Seasonally frozen layer in natural and drained peatlands at the South of West Siberia, Russia

    NASA Astrophysics Data System (ADS)

    Dyukarev, Egor; Kiselev, Maxim; Voropay, Nadezhda; Preis, Yulia

    2017-04-01

    The temperature regime of soils in natural and drained peatlands at Bakchar bog located in the South Taiga zone of West Siberia is studied. Soil temperature for depths up to 320 cm was registered using autonomous temperature profile recorder during the period from August 2010 to September 2016. Maximal and minimal temperatures were registered at surface in July and February, consequently. Extreme soil temperatures at 320 cm depth shifts to December (maximum) and July (minimum) reducing absolute values. Annual peat soil temperature amplitude decrease with depth from 21,8 °C on surface to 1,1 °C at 320 cm. The analysis of daily, month and annual mean data of temperature in peat soil has shown that seasonally frozen layer was registered up to 20-60 cm depth. The duration of seasonally freeze layer existence varies from 130 to 180 days. Drained peatlands with the lowest water table have highest freeze depth. Soil at water-logged sedge-sphagnum fen in winter is warmer than soil in ryam ecosystem and mineral soil at upland. Maximal freezing depth in peatlands is up to 3 times lower than at drain areas.

  15. Integrating Reform-Oriented Math Instruction in Special Education Settings

    ERIC Educational Resources Information Center

    Bottge, Brian A.; Rueda, Enrique; LaRoque, Perry T.; Serlin, Ronald C.; Kwon, Jungmin

    2007-01-01

    This mixed-methods study assessed the effects of Enhanced Anchored Instruction (EAI) on the math performance of adolescents with learning disabilities in math (MLD). A quasi-experimental pretest-posttest control group design with switching replications was used to measure students' computation and problem-solving skills on EAI compared to control…

  16. Masking Level Difference Response Norms from Learning Disabled Individuals.

    ERIC Educational Resources Information Center

    Waryas, Paul A.; Battin, R. Ray

    1985-01-01

    The study presents normative data on Masking Level Difference (an improvement of the auditory processing of interaural time/intensity differences between signals and masking noises) for 90 learning disabled persons (4-35 years old). It was concluded that the MLD may quickly screen for auditory processing problems. (CL)

  17. Cognitive and Emotional Factors in Children with Mathematical Learning Disabilities

    ERIC Educational Resources Information Center

    Passolunghi, Maria Chiara

    2011-01-01

    Emotional and cognitive factors were examined in 18 children with mathematical learning disabilities (MLD), compared with 18 normally achieving children, matched for chronological age, school level, gender and verbal IQ. Working memory, short-term memory, inhibitory processes, speed of processing and level of anxiety in mathematics were assessed…

  18. Profiles of Patients Demonstrating Abnormal Masking Level Difference Response.

    ERIC Educational Resources Information Center

    Battin, R. Ray; Waryas, Paul A.

    1985-01-01

    Profiles of three persons (9-11 years old) with extremely reduced masking level difference results (scores which measure binaural release from masking) are reported. It is suggested that tests of the MLD appear to be a useful adjunct of an evaluation battery for patients with presumed auditory perceptual problems. (CL)

  19. Chromium boron surfaced nickel-iron base alloys

    NASA Technical Reports Server (NTRS)

    Rashid, James M. (Inventor); Friedrich, Leonard A. (Inventor); Freling, Melvin (Inventor)

    1984-01-01

    Chromium boron diffusion coatings on nickel iron alloys uniquely provide them with improvement in high cycle fatigue strength (up to 30%) and erosion resistance (up to 15 times), compared to uncoated alloy. The diffused chromium layer extends in two essential concentration zones to a total depth of about 40.times.10.sup.-6 m, while the succeeding boron layer is limited to 50-90% of the depth of the richest Cr layer nearest the surface. Both coatings are applied using conventional pack diffusion processes.

  20. Lithospheric Layering beneath the Contiguous United States Constrained by S-to-P Receiver Functions

    NASA Astrophysics Data System (ADS)

    Liu, L.; Liu, K. H.; Kong, F.; Gao, S. S.

    2017-12-01

    The greatly-improved spatial coverage of broadband seismic stations as a result of the deployment of the EarthScope Transportable Array (TA) stations and the diversity of tectonic environments in the contiguous United States provide a unique opportunity to investigate the depth variation and nature of intra-lithospheric interfaces in different tectonic regimes. A total of 284,121 high-quality S-to-P receiver functions (SRFs) are obtained from 3,809 broadband seismic stations in the TA and other permanent and temporary deployments in the contiguous United States. The SRFs are computed using frequency domain deconvolution, and are stacked in consecutive circles with a radius of 2°. They are converted to depth series after move-out corrections using the IASP91 Earth model. Similar to previous SRF studies, a robust negative arrival, representing a sharp discontinuity of velocity reduction with depth, is visible in virtually all the stacked traces in the depth range of 30-110 km. Beneath the western US, the depth of this discontinuity is 69±17 km, and beneath the eastern US, it ranges from 75 to 90 km, both of which are comparable to the depth of the tomographically-determined lithosphere-asthenosphere boundary (LAB). In contrast, the depth of the discontinuity beneath the central US is 83±10 km which is significantly smaller than the 250 km LAB depth determined by seismic surface wave tomography. Based on previous seismic tomography, shear-wave splitting and mantle xenolith studies, we interpret this discontinuity as the top of a frozen-in layer of volatile-rich melt beneath the central US. The observations and the discrepancy between the SRF and seismic tomography results for the central US as well as the amplitude of the corresponding arrival on the SRFs may be explained by spatial variations of the thickness of the transitional layer between the "pure" lithosphere and the "pure" asthenosphere. Under this hypothesis, the consistency between the results from the SRFs and seismic tomography for the western and eastern US suggests a thin transitional layer. On the contrary, a thick transitional layer is inferred for the central US. For this area, while the long-period surface waves can detect the transitional layer, the gradual natural of its lower boundary makes it hard for the short wavelength SRFs to detect.

  1. Contraction rate, flow modification and bed layering impact on scour at the elliptical guide banks

    NASA Astrophysics Data System (ADS)

    Gjunsburgs, B.; Jaudzems, G.; Bizane, M.; Bulankina, V.

    2017-10-01

    Flow contraction by the bridge crossing structures, intakes, embankments, piers, abutments and guide banks leads to general scour and the local scour in the vicinity of the structures. Local scour is depending on flow, river bed and structures parameters and correct understanding of the impact of each parameter can reduce failure possibility of the structures. The paper explores hydraulic contraction, the discharge redistribution between channel and floodplain during the flood, local flow modification and river bed layering on depth, width and volume of scour hole near the elliptical guide banks on low-land rivers. Experiments in a flume, our method for scour calculation and computer modelling results confirm a considerable impact of the contraction rate of the flow, the discharge redistribution between channel and floodplain, the local velocity, backwater and river bed layering on the depth, width, and volume of scour hole in steady and unsteady flow, under clear water condition. With increase of the contraction rate of the flow, the discharge redistribution between channel and floodplain, the local velocity, backwater values, the scour depth increases. At the same contraction rate, but at a different Fr number, the scour depth is different: with increase in the Fr number, the local velocity, backwater, scour depth, width, and volume is increasing. Acceptance of the geometrical contraction of the flow, approach velocity and top sand layer of the river bed for scour depth calculation as accepted now, may be the reason of the structures failure and human life losses.

  2. HOLEGAGE 1.0 - Strain-Gauge Drilling Analysis Program

    NASA Technical Reports Server (NTRS)

    Hampton, Roy V.

    1992-01-01

    Interior stresses inferred from changes in surface strains as hole is drilled. Computes stresses using strain data from each drilled-hole depth layer. Planar stresses computed in three ways: least-squares fit for linear variation with depth, integral method to give incremental stress data for each layer, and/or linear fit to integral data. Written in FORTRAN 77.

  3. A Generic 1D Forward Modeling and Inversion Algorithm for TEM Sounding with an Arbitrary Horizontal Loop

    NASA Astrophysics Data System (ADS)

    Li, Zhanhui; Huang, Qinghua; Xie, Xingbing; Tang, Xingong; Chang, Liao

    2016-08-01

    We present a generic 1D forward modeling and inversion algorithm for transient electromagnetic (TEM) data with an arbitrary horizontal transmitting loop and receivers at any depth in a layered earth. Both the Hankel and sine transforms required in the forward algorithm are calculated using the filter method. The adjoint-equation method is used to derive the formulation of data sensitivity at any depth in non-permeable media. The inversion algorithm based on this forward modeling algorithm and sensitivity formulation is developed using the Gauss-Newton iteration method combined with the Tikhonov regularization. We propose a new data-weighting method to minimize the initial model dependence that enhances the convergence stability. On a laptop with a CPU of i7-5700HQ@3.5 GHz, the inversion iteration of a 200 layered input model with a single receiver takes only 0.34 s, while it increases to only 0.53 s for the data from four receivers at a same depth. For the case of four receivers at different depths, the inversion iteration runtime increases to 1.3 s. Modeling the data with an irregular loop and an equal-area square loop indicates that the effect of the loop geometry is significant at early times and vanishes gradually along the diffusion of TEM field. For a stratified earth, inversion of data from more than one receiver is useful in noise reducing to get a more credible layered earth. However, for a resistive layer shielded below a conductive layer, increasing the number of receivers on the ground does not have significant improvement in recovering the resistive layer. Even with a down-hole TEM sounding, the shielded resistive layer cannot be recovered if all receivers are above the shielded resistive layer. However, our modeling demonstrates remarkable improvement in detecting the resistive layer with receivers in or under this layer.

  4. Mapping the opacity of paint layers in paintings with coloured grounds using optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Liu, Ping; Hall-Aquitania, Moorea; Hermens, Erma; Groves, Roger M.

    2017-07-01

    Optical diagnostics techniques are becoming important for technical art history (TAH) as well as for heritage conservation. In recent years, optical coherence tomography (OCT) has been increasingly used as a novel technique for the inspection of artwork, revealing the stratigraphy of paintings. It has also shown to be an effective tool for vanish layer inspection. OCT is a contactless and non-destructive technique for microstructural imaging of turbid media, originally developed for medical applications. However current OCT instruments have difficulty in paint layer inspection due to the opacity of most pigments. This paper explores the potential of OCT for the investigation of paintings with coloured grounds. Depth scans were processed to determine the light penetration depth at the optical wavelength based on a 1/e light attenuation calculation. The variation in paint opacity was mapped based on the microstructural images and 3D penetration depth profiles was calculated and related back to the construction of the artwork. By determining the light penetration depth over a range of wavelengths the 3D depth perception of a painting with coloured grounds can be characterized optically.

  5. In-depth evolution of chemical states and sub-10-nm-resolution crystal orientation mapping of nanograins in Ti(5 nm)/Au(20 nm)/Cr(3 nm) tri-layer thin films

    NASA Astrophysics Data System (ADS)

    Zhu, Xiaoli; Todeschini, Matteo; Bastos da Silva Fanta, Alice; Liu, Lintao; Jensen, Flemming; Hübner, Jörg; Jansen, Henri; Han, Anpan; Shi, Peixiong; Ming, Anjie; Xie, Changqing

    2018-09-01

    The applications of Au thin films and their adhesion layers often suffer from a lack of sufficient information about the chemical states of adhesion layers and about the high-lateral-resolution crystallographic morphology of Au nanograins. Here, we demonstrate the in-depth evolution of the chemical states of adhesive layers at the interfaces and the crystal orientation mapping of gold nanograins with a lateral resolution of less than 10 nm in a Ti/Au/Cr tri-layer thin film system. Using transmission electron microscopy, the variation in the interdiffusion at Cr/Au and Ti/Au interfaces was confirmed. From X-ray photoelectron spectroscopy (XPS) depth profiling, the chemical states of Cr, Au and Ti were characterized layer by layer, suggesting the insufficient oxidation of the adhesive layers. At the interfaces the Au 4f peaks shift to higher binding energies and this behavior can be described by a proposed model based on electron reorganization and substrate-induced final-state neutralization in small Au clusters supported by the partially oxidized Ti layer. Utilizing transmission Kikuchi diffraction (TKD) in a scanning electron microscope, the crystal orientation of Au nanograins between two adhesion layers was non-destructively characterized with sub-10 nm spatial resolution. The results provide nanoscale insights into the Ti/Au/Cr thin film system and contribute to our understanding of its behavior in nano-optic and nano-electronic devices.

  6. Active layer monitoring at CALM-S site near J.G.Mendel Station, James Ross Island, eastern Antarctic Peninsula.

    PubMed

    Hrbáček, Filip; Kňažková, Michaela; Nývlt, Daniel; Láska, Kamil; Mueller, Carsten W; Ondruch, Jakub

    2017-12-01

    The Circumpolar Active Layer Monitoring - South (CALM-S) site was established in February 2014 on James Ross Island as the first CALM-S site in the eastern Antarctic Peninsula region. The site, located near Johann Gregor Mendel Station, is labelled CALM-S JGM. The grid area is gently sloped (<3°) and has an elevation of between 8 and 11ma.s.l. The lithology of the site consists of the muddy sediments of Holocene marine terrace and clayey-sandy Cretaceous sedimentary rocks, which significantly affect the texture, moisture content, and physical parameters of the ground within the grid. Our objective was to study seasonal and interannual variability of the active layer depth and thermal regime at the CALM-S site, and at two ground temperature measurement profiles, AWS-JGM and AWS-CALM, located in the grid. The mean air temperature in the period March 2013 to February 2016 reached -7.2°C. The mean ground temperature decreased with depth from -5.3°C to -5.4°C at 5cm, to -5.5°C to -5.9°C at 200cm. Active layer thickness was significantly higher at AWS-CALM and ranged between 86cm (2014/15) and 87cm (2015/16), while at AWS-JGM it reached only 51cm (2013/14) to 65cm (2015/16). The mean probed active layer depth increased from 66.4cm in 2013/14 to 78.0cm in 2014/15. Large differences were observed when comparing the minimum (51cm to 59cm) and maximum (100cm to 113cm) probed depths. The distribution of the active layer depth and differences in the thermal regime of the uppermost layer of permafrost at CALM-S JGM clearly show the effect of different lithological properties on the two lithologically distinct parts of the grid. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. First Atmospheric Science Results from the Mars Exploration Rovers Mini-TES

    NASA Technical Reports Server (NTRS)

    Smith, Michael D.; Wolff, Michael J.; Lemmon, Mark T.; Spanovich, Nicole; Banfield, Don; Budney, Charles J.; Clancy, R. Todd; Ghosh, Amitabha; Landis, Geoffrey A.; Smith, Peter; hide

    2004-01-01

    Thermal infrared spectra of the martian atmosphere taken by the Miniature Thermal Emission Spectrometer (Mini-TES) were used to determine the atmospheric temperatures in the planetary boundary layer and the column-integrated optical depth of aerosols. Mini-TES observations show the diurnal variation of the martian boundary layer thermal structure, including a near-surface superadiabatic layer during the afternoon and an inversion layer at night. Upward-looking Mini-TES observations show warm and cool parcels of air moving through the Mini-TES field of view on a time scale of 30 seconds. The retrieved dust optical depth shows a downward trend at both sites.

  8. First Atmospheric Science Results from the Mars Exploration Rovers Mini-TES.

    PubMed

    Smith, Michael D; Wolff, Michael J; Lemmon, Mark T; Spanovich, Nicole; Banfield, Don; Budney, Charles J; Clancy, R Todd; Ghosh, Amitabha; Landis, Geoffrey A; Smith, Peter; Whitney, Barbara; Christensen, Philip R; Squyres, Steven W

    2004-12-03

    Thermal infrared spectra of the martian atmosphere taken by the Miniature Thermal Emission Spectrometer (Mini-TES) were used to determine the atmospheric temperatures in the planetary boundary layer and the column-integrated optical depth of aerosols. Mini-TES observations show the diurnal variation of the martian boundary layer thermal structure, including a near-surface superadiabatic layer during the afternoon and an inversion layer at night. Upward-looking Mini-TES observations show warm and cool parcels of air moving through the Mini-TES field of view on a time scale of 30 seconds. The retrieved dust optical depth shows a downward trend at both sites.

  9. Investigation of heave response of the deepwater octagonal FDPSO using various heave plate configurations

    NASA Astrophysics Data System (ADS)

    Yu, Chenfang; Hu, Zhiqiang; Wang, Shisheng

    2017-12-01

    Heave plates can be employed to control undesirable heave motion amplitudes of the deepwater octagonal Floating, Drilling, Production, Storage, and Offloading (FDPSO) platform. Numerical simulations and model tests were applied to analyze and investigate the hydrodynamic response and the feasibility of the heave plate configurations. The diameter and the depth below the free surface of a single-layer heave plate, as well as the spacing of two-layer heave plates, were considered as the primary variables when studying the effect of heave plates on FDPSO hydrodynamics. The analysis results indicate that the heave plate diameter significantly affects the heave hydrodynamics, and heave performance could be improved with an increased diameter. In addition, increasing the depth below the free surface of a single-layer heave plate does not effectively suppress the heave motion within the range of draft depths tested. The target FDPSO obtained better heave characteristics with increased spacing between the two-layer heave plates. Furthermore, the global performances of the octagonal FDPSO with these typical heave plate configurations were comparatively analyzed. The results indicate that from a hydrodynamic point of view, the single-layer heave plate configuration has an advantage over the two-layer heave plate configuration.

  10. Multi-viewpoint Image Array Virtual Viewpoint Rapid Generation Algorithm Based on Image Layering

    NASA Astrophysics Data System (ADS)

    Jiang, Lu; Piao, Yan

    2018-04-01

    The use of multi-view image array combined with virtual viewpoint generation technology to record 3D scene information in large scenes has become one of the key technologies for the development of integrated imaging. This paper presents a virtual viewpoint rendering method based on image layering algorithm. Firstly, the depth information of reference viewpoint image is quickly obtained. During this process, SAD is chosen as the similarity measure function. Then layer the reference image and calculate the parallax based on the depth information. Through the relative distance between the virtual viewpoint and the reference viewpoint, the image layers are weighted and panned. Finally the virtual viewpoint image is rendered layer by layer according to the distance between the image layers and the viewer. This method avoids the disadvantages of the algorithm DIBR, such as high-precision requirements of depth map and complex mapping operations. Experiments show that, this algorithm can achieve the synthesis of virtual viewpoints in any position within 2×2 viewpoints range, and the rendering speed is also very impressive. The average result proved that this method can get satisfactory image quality. The average SSIM value of the results relative to real viewpoint images can reaches 0.9525, the PSNR value can reaches 38.353 and the image histogram similarity can reaches 93.77%.

  11. Perturbations in the upper layers of α Centauri A

    NASA Astrophysics Data System (ADS)

    Brito, A.; Lopes, I.

    2016-01-01

    The emerging field of asteroseismology allows the direct study of stellar interiors with an incredibly high precision. We used a seismic parameter based on the phase shift as a diagnostic tool to infer the presence of a new layer of rapid variation in the external layers of the primary component of the stellar system Alpha Centauri AB. This layer is, apparently, a thin region where the acoustic modes suffer a strong scattering. Our tests indicate that this layer should be located at an acoustical depth of approximately 1400 s (0.939 R), which corresponds to a depth of 6% below the surface of the star. This is somehow unexpected since the internal structure of this sun-like star is predicted to be similar to the Sun.

  12. Subsurface temperature estimation from climatology and satellite SST for the sea around Korean Peninsula 1Bong-Guk, Kim, 1Yang-Ki, Cho, 1Bong-Gwan, Kim, 1Young-Gi, Kim, 1Ji-Hoon, Jung 1School of Earth and Environmental Sciences, Seoul National University

    NASA Astrophysics Data System (ADS)

    Kim, Bong-Guk; Cho, Yang-Ki; Kim, Bong-Gwan; Kim, Young-Gi; Jung, Ji-Hoon

    2015-04-01

    Subsurface temperature plays an important role in determining heat contents in the upper ocean which are crucial in long-term and short-term weather systems. Furthermore, subsurface temperature affects significantly ocean ecology. In this study, a simple and practical algorithm has proposed. If we assume that subsurface temperature changes are proportional to surface heating or cooling, subsurface temperature at each depth (Sub_temp) can be estimated as follows PIC whereiis depth index, Clm_temp is temperature from climatology, dif0 is temperature difference between satellite and climatology in the surface, and ratio is ratio of temperature variability in each depth to surface temperature variability. Subsurface temperatures using this algorithm from climatology (WOA2013) and satellite SST (OSTIA) where calculated in the sea around Korean peninsula. Validation result with in-situ observation data show good agreement in the upper 50 m layer with RMSE (root mean square error) less than 2 K. The RMSE is smallest with less than 1 K in winter when surface mixed layer is thick, and largest with about 2~3 K in summer when surface mixed layer is shallow. The strong thermocline and large variability of the mixed layer depth might result in large RMSE in summer. Applying of mixed layer depth information for the algorithm may improve subsurface temperature estimation in summer. Spatial-temporal details on the improvement and its causes will be discussed.

  13. Improving depth resolutions in positron beam spectroscopy by concurrent ion-beam sputtering

    NASA Astrophysics Data System (ADS)

    John, Marco; Dalla, Ayham; Ibrahim, Alaa M.; Anwand, Wolfgang; Wagner, Andreas; Böttger, Roman; Krause-Rehberg, Reinhard

    2018-05-01

    The depth resolution of mono-energetic positron annihilation spectroscopy using a positron beam is shown to improve by concurrently removing the sample surface layer during positron beam spectroscopy. During ion-beam sputtering with argon ions, Doppler-broadening spectroscopy is performed with energies ranging from 3 keV to 5 keV allowing for high-resolution defect studies just below the sputtered surface. With this technique, significantly improved depth resolutions could be obtained even at larger depths when compared to standard positron beam experiments which suffer from extended positron implantation profiles at higher positron energies. Our results show that it is possible to investigate layered structures with a thickness of about 4 microns with significantly improved depth resolution. We demonstrated that a purposely generated ion-beam induced defect profile in a silicon sample could be resolved employing the new technique. A depth resolution of less than 100 nm could be reached.

  14. Diffusion induced atomic islands on the surface of Ni/Cu nanolayers

    NASA Astrophysics Data System (ADS)

    Takáts, Viktor; Csik, Attila; Hakl, József; Vad, Kálmán

    2018-05-01

    Surface islands formed by grain-boundary diffusion has been studied in Ni/Cu nanolayers by in-situ low energy ion scattering spectroscopy, X-ray photoelectron spectroscopy, scanning probe microscopy and ex-situ depth profiling based on ion sputtering. In this paper a new experimental approach of measurement of grain-boundary diffusion coefficients is presented. Appearing time of copper atoms diffused through a few nanometer thick nickel layer has been detected by low energy ion scattering spectroscopy with high sensitivity. The grain-boundary diffusion coefficient can be directly calculated from this appearing time without using segregation factors in calculations. The temperature range of 423-463 K insures the pure C-type diffusion kinetic regime. The most important result is that surface coverage of Ni layer by Cu atoms reaches a maximum during annealing and stays constant if the annealing procedure is continued. Scanning probe microscopy measurements show a Volmer-Weber type layer growth of Cu layer on the Ni surface in the form of Cu atomic islands. Depth distribution of Cu in Ni layer has been determined by depth profile analysis.

  15. Depth Profile of Induced Magnetic Polarization in Cu Layers of Co/Cu(111) Metallic Superlattices by Resonant X-ray Magnetic Scattering at the Cu K Absorption Edge

    NASA Astrophysics Data System (ADS)

    Uegaki, Shin; Yoshida, Akihiro; Hosoito, Nobuyoshi

    2015-03-01

    We investigated induced spin polarization of 4p conduction electrons in Cu layers of antiferromagnetically (AFM) and ferromagnetically (FM) coupled Co/Cu(111) metallic superlattices by resonant X-ray magnetic scattering at the Cu K absorption edge. Magnetic reflectivity profiles of the two superlattices were measured in the magnetic saturation state with circularly polarized synchrotron radiation X-rays at 8985 eV. Depth profiles of the resonant magnetic scattering length of Cu, which corresponds to the induced spin polarization of Cu, were evaluated in the two Co/Cu superlattices by analyzing the observed magnetic reflectivity profiles. We demonstrated that the spin polarization induced in the Cu layer was distributed around the Co/Cu interfaces with an attenuation length of several Å in both AFM and FM coupled superlattices. The uniform component, which exists in Au layers of Fe/Au(001) superlattices, was not found in the depth distribution of induced magnetic polarization in the Cu layers of Co/Cu(111) superlattices.

  16. Method to fabricate multi-level silicon-based microstructures via use of an etching delay layer

    DOEpatents

    Manginell, Ronald P.; Schubert, W. Kent; Shul, Randy J.

    2005-08-16

    New methods for fabrication of silicon microstructures have been developed. In these methods, an etching delay layer is deposited and patterned so as to provide differential control on the depth of features being etched into a substrate material. Structures having features with different depth can be formed thereby in a single etching step.

  17. The effects of temporal variability of mixed layer depth on primary productivity around Bermuda

    NASA Technical Reports Server (NTRS)

    Bissett, W. Paul; Meyers, Mark B.; Walsh, John J.; Mueller-Karger, Frank E.

    1994-01-01

    Temporal variations in primary production and surface chlorophyll concentrations, as measured by ship and satellite around Bermuda, were simulated with a numerical model. In the upper 450 m of the water column, population dynamics of a size-fractionated phytoplankton community were forced by daily changes of wind, light, grazing stress, and nutrient availability. The temporal variations of production and chlorophyll were driven by changes in nutrient introduction to the euphotic zone due to both high- and low-frequency changes of the mixed layer depth within 32 deg-34 deg N, 62 deg-64 deg W between 1979 and 1984. Results from the model derived from high-frequency (case 1) changes in the mixed layer depth showed variations in primary production and peak chlorophyll concentrations when compared with results from the model derived from low-frequency (case 2) mixed layer depth changes. Incorporation of size-fractionated plankton state variables in the model led to greater seasonal resolution of measured primary production and vertical chlorophyll profiles. The findings of this study highlight the possible inadequacy of estimating primary production in the sea from data of low-frequency temporal resolution and oversimplified biological simulations.

  18. Fabrication of microchannels in polycrystalline diamond using pre-fabricated Si substrates

    NASA Astrophysics Data System (ADS)

    Chandran, Maneesh; Elfimchev, Sergey; Michaelson, Shaul; Akhvlediani, Rozalia; Ternyak, Orna; Hoffman, Alon

    2017-10-01

    In this paper, we report on a simple, feasible method to fabricate microchannels in diamond. Polycrystalline diamond microchannels were produced by fabricating trenches in a Si wafer and subsequently depositing a thin layer of diamond onto this substrate using the hot filament vapor deposition technique. Fabrication of trenches in the Si substrate at different depths was carried out by standard photolithography, and the subsequent deposition of the diamond layer was performed by the hot filament chemical vapor deposition technique. The growth mechanism of diamond that leads to the formation of closed diamond microchannels is discussed in detail based on the Knudsen number and growth chemistry of diamond. Variations in the crystallite size, crystalline quality, and thickness of the diamond layer along the trench depths were systematically analyzed using cross-sectional scanning electron microscopy and Raman spectroscopy. Defect density and formation of non-diamond forms of carbon in the diamond layer were found to increase with the trench depth, which sets a limit of 5-45 μm trench depth (or an aspect ratio of 1-9) for the fabrication of diamond microchannels using this method under the present conditions.

  19. Irrigation depth far exceeds water uptake depth in an oasis cropland in the middle reaches of Heihe River Basin

    PubMed Central

    Yang, Bin; Wen, Xuefa; Sun, Xiaomin

    2015-01-01

    Agricultural irrigation in the middle reaches of the Heihe River Basin consumes approximately 80% of the total river water. Whether the irrigation depth matches the water uptake depth of crops is one of the most important factors affecting the efficiency of irrigation water use. Our results indicated that the influence of plastic film on soil water δ18O was restricted to 0–30 cm soil depth. Based on a Bayesian model (MixSIR), we found that irrigated maize acquired water preferentially from 0–10 cm soil layer, with a median uptake proportion of 87 ± 15%. Additionally, maize utilised a mixture of irrigation and shallow soil water instead of absorbing the irrigation water directly. However, only 24.7 ± 5.5% of irrigation water remained in 0–10 cm soil layer, whereas 29.5 ± 2.8% and 38.4 ± 3.3% of the irrigation water infiltrated into 10–40 cm and 40–80 cm layers. During the 4 irrigation events, approximately 39% of the irrigation and rainwater infiltrated into soil layers below 80 cm. Reducing irrigation amount and developing water-saving irrigation methods will be important strategies for improving the efficiency of irrigation water use in this area. PMID:26463010

  20. Lithospheric Deformation Along the Southern and Western Suture Zones of the Wyoming Province

    NASA Astrophysics Data System (ADS)

    Nuyen, C.; Porritt, R. W.; O'Driscoll, L.

    2014-12-01

    The Wyoming Province is an Archean craton that played an early role in the construction and growth of the North American continent. This region, which encompasses the majority of modern day Wyoming and southern Montana, initially collided with other Archean blocks in the Paleoproterozoic (2.0-1.8 Ga), creating the Canadian Shield. From 1.8-1.68 Ga, the Yavapai Province crashed into the Wyoming Province, suturing the two together. The accretion of the Yavapai Province gave way to the Cheyenne Belt, a deformational zone that exists along the southern border of the Wyoming Province where earlier studies have found evidence for crustal imbrication and double a Moho. Current deformation within the Wyoming province is due to its interaction with the Yellowstone Hotspot, which is currently located in the northwest portion of the region. This study images the LAB along the western and southern borders of the Wyoming Province in order to understand how the region's Archean lithosphere has responded to deformation over time. These results shed light on the inherent strength of Archean cratonic lithosphere in general. We employ two methods for this study: common conversion point (CCP) stacking of S to P receiver functions and teleseismic and ambient Rayleigh wave dispersion. The former is used to image the LAB structure while the latter is used to create a velocity gradient for the region. Results from both of the methods reveal a notably shallower LAB depth to the west of the boundary. The shallower LAB west of the Wyoming Province is interpreted to be a result of lithospheric thinning due to the region's interaction with the Yellowstone Hotspot and post-Laramide deformation and extension of the western United States. We interpret the deeper LAB east of the boundary to be evidence for the Wyoming Province's resistance to lithospheric deformation from the hotspot and tectonic processes. CCP images across the Cheyenne Belt also reveal a shallower LAB under the western perimeter of the belt. We believe that this is a result of the LAB jumping up to a mid-lithospheric discontinuity (MLD) as the less stable lower lithosphere was thinned or removed. This same MLD appears above the intact LAB in the eastern portion of the Cheyenne Belt. This suggests that the western end of the Cheyenne Belt has undergone more deformation over time than the eastern end.

  1. The activity and community structure of total bacteria and denitrifying bacteria across soil depths and biological gradients in estuary ecosystem.

    PubMed

    Lee, Seung-Hoon; Kang, Hojeong

    2016-02-01

    The distribution of soil microorganisms often shows variations along soil depth, and even in the same soil layer, each microbial group has a specific niche. In particular, the estuary soil is intermittently flooded, and the characteristics of the surface soil layer are different from those of other terrestrial soils. We investigated the microbial community structure and activity across soil depths and biological gradients composed of invasive and native plants in the shallow surface layer of an estuary ecosystem by using molecular approaches. Our results showed that the total and denitrifying bacterial community structures of the estuarine wetland soil differed according to the short depth gradient. In growing season, gene copy number of 16S rRNA were 1.52(±0.23) × 10(11), 1.10(±0.06) × 10(11), and 4.33(±0.16) × 10(10) g(-1) soil; nirS were 5.41(±1.25) × 10(8), 4.93(±0.94) × 10(8), and 2.61(±0.28) × 10(8) g(-1) soil; and nirK were 9.67(±2.37) × 10(6), 3.42(±0.55) × 10(6), and 2.12(±0.19) × 10(6) g(-1) soil in 0 cm, 5 cm, and 10 cm depth layer, respectively. The depth-based difference was distinct in the vegetated sample and in the growing season, evidencing the important role of plants in structuring the microbial community. In comparison with other studies, we observed differences in the microbial community and functions even across very short depth gradients. In conclusion, our results suggested that (i) in the estuary ecosystem, the denitrifying bacterial community could maintain its abundance and function within shallow surface soil layers through facultative anaerobiosis, while the total bacterial community would be both quantitatively and qualitatively affected by the soil depth, (ii) the nirS gene community, rather than the nirK one, should be the first candidate used as an indicator of the microbial denitrification process in the estuary system, and (iii) as the microbial community is distributed and plays a certain niche role according to biogeochemical factors, the study of the microbial community even in surface soil should be performed in detail by considering the soil depth.

  2. Cognitive Mechanisms Underlying Achievement Deficits in Children with Mathematical Learning Disability

    ERIC Educational Resources Information Center

    Geary, David C.; Hoard, Mary K.; Byrd-Craven, Jennifer; Nugent, Lara; Numtee, Chattavee

    2007-01-01

    Using strict and lenient mathematics achievement cutoff scores to define a learning disability, respective groups of children who are math disabled (MLD, n = 15) and low achieving (LA, n = 44) were identified. These groups and a group of typically achieving (TA, n = 46) children were administered a battery of mathematical cognition, working…

  3. Detecting Strengths and Weaknesses in Learning Mathematics through a Model Classifying Mathematical Skills

    ERIC Educational Resources Information Center

    Karagiannakis, Giannis N.; Baccaglini-Frank, Anna E.; Roussos, Petros

    2016-01-01

    Through a review of the literature on mathematical learning disabilities (MLD) and low achievement in mathematics (LA) we have proposed a model classifying mathematical skills involved in learning mathematics into four domains (Core number, Memory, Reasoning, and Visual-spatial). In this paper we present a new experimental computer-based battery…

  4. Fact Retrieval Deficits in Low Achieving Children and Children with Mathematical Learning Disability

    ERIC Educational Resources Information Center

    Geary, David C.; Hoard, Mary K.; Bailey, Drew H.

    2012-01-01

    Using 4 years of mathematics achievement scores, groups of typically achieving children (n = 101) and low achieving children with mild (LA-mild fact retrieval; n = 97) and severe (LA-severe fact retrieval; n = 18) fact retrieval deficits and mathematically learning disabled children (MLD; n = 15) were identified. Multilevel models contrasted…

  5. The Contributions of Domain-General and Numerical Factors to Third-Grade Arithmetic Skills and Mathematical Learning Disability

    ERIC Educational Resources Information Center

    Cowan, Richard; Powell, Daisy

    2014-01-01

    Explanations of the marked individual differences in elementary school mathematical achievement and mathematical learning disability (MLD or dyscalculia) have involved domain-general factors (working memory, reasoning, processing speed, and oral language) and numerical factors that include single-digit processing efficiency and multidigit skills…

  6. Improving the Fraction Word Problem Solving of Students with Mathematics Learning Disabilities: Interactive Computer Application

    ERIC Educational Resources Information Center

    Shin, Mikyung; Bryant, Diane P.

    2017-01-01

    Students with mathematics learning disabilities (MLD) have a weak understanding of fraction concepts and skills, which are foundations of algebra. Such students might benefit from computer-assisted instruction that utilizes evidence-based instructional components (cognitive strategies, feedback, virtual manipulatives). As a pilot study using a…

  7. Cognitive Processing and Mathematical Achievement: A Study with Schoolchildren between Fourth and Sixth Grade of Primary Education

    ERIC Educational Resources Information Center

    Iglesias-Sarmiento, Valentin; Deano, Manuel

    2011-01-01

    This investigation analyzed the relation between cognitive functioning and mathematical achievement in 114 students in fourth, fifth, and sixth grades. Differences in cognitive performance were studied concurrently in three selected achievement groups: mathematical learning disability group (MLD), low achieving group (LA), and typically achieving…

  8. Improvement of Word Problem Solving and Basic Mathematics Competencies in Students with Attention Deficit/Hyperactivity Disorder and Mathematical Learning Difficulties

    ERIC Educational Resources Information Center

    González-Castro, Paloma; Cueli, Marisol; Areces, Débora; Rodríguez, Celestino; Sideridis, Georgios

    2016-01-01

    Problem solving represents a salient deficit in students with mathematical learning difficulties (MLD) primarily caused by difficulties with informal and formal mathematical competencies. This study proposes a computerized intervention tool, the integrated dynamic representation (IDR), for enhancing the early learning of basic mathematical…

  9. Effects of Enhanced Anchored Instruction on Skills Aligned to Common Core Math Standards

    ERIC Educational Resources Information Center

    Bottge, Brian A.; Cho, Sun-Joo

    2013-01-01

    This study compared how students with learning difficulties in math (MLD) who were randomly assigned to two instructional conditions answered items on problem solving tests aligned to the Common Core State Standards Initiative for Mathematics. Posttest scores showed improvement in the math performance of students receiving Enhanced Anchored…

  10. Electrophysiological Evidence for the Sources of the Masking Level Difference

    ERIC Educational Resources Information Center

    Fowler, Cynthia G.

    2017-01-01

    Purpose: The purpose of this review article is to review evidence from auditory evoked potential studies to describe the contributions of the auditory brainstem and cortex to the generation of the masking level difference (MLD). Method: A literature review was performed, focusing on the auditory brainstem, middle, and late latency responses used…

  11. Effects of Two Interventions on Solving Basic Fact Problems by Second Graders with Mathematics Learning Disabilities

    ERIC Educational Resources Information Center

    Dennis, Minyi Shih; Sorrells, Audrey McCray; Falcomata, Terry S.

    2016-01-01

    This study used a multiple probe across participants design, replicated across two interventions and counterbalanced across participant groups to examine the effects of number sense intervention and extensive practice intervention on strategy transformation when students with mathematics learning disabilities (MLD) solved basic fact problems. In…

  12. Behind Mathematical Learning Disabilities: What about Visual Perception and Motor Skills?

    ERIC Educational Resources Information Center

    Pieters, Stefanie; Desoete, Annemie; Roeyers, Herbert; Vanderswalmen, Ruth; Van Waelvelde, Hilde

    2012-01-01

    In a sample of 39 children with mathematical learning disabilities (MLD) and 106 typically developing controls belonging to three control groups of three different ages, we found that visual perception, motor skills and visual-motor integration explained a substantial proportion of the variance in either number fact retrieval or procedural…

  13. Vegetation succession and impacts of biointrusion on covers used to limit acid mine drainage.

    PubMed

    Smirnova, Evgeniya; Bussière, Bruno; Tremblay, Francine; Bergeron, Yves

    2011-01-01

    A cover with capillary barrier effects (CCBE) was constructed in 1998 on the abandoned Lorraine mine tailings impoundment to limit the generation of acid mine drainage. The Ministry of Natural Resources and Fauna of Quebec (MRNF) is responsible for the site and for all restoration works on it, including CCBE construction. The CCBE is made up of three layers: a 0.3-m layer of sand used as a support and capillary break layer; a moisture-retaining layer with a thickness of 0.5 m (this layer is constructed of a nonplastic silt); and a 0.3-m sand and gravel layer on top. The main objective of the CCBE is to maintain one (or more) of the layers at a high degree of water saturation to impede oxygen migration and acid generation. Vegetation succession on the Lorraine CCBE results in an improvement in soil conditions, leading to the installation of deep-rooted species, which could represent a risk to CCBE long-term performance. Hence, the characterization of vegetation succession is an important aspect of the monitoring strategy for the Lorraine CCBE. Species occurrence was documented, and depth of tree roots was measured by excavation on a regular basis. Eight functional groups of plants were identified; herbaceous plants were the most abundant ecological plant groups. Tree ring counts confirmed that tree colonization started the year of CCBE construction (1999). Of the 11 tree species identified, the most abundant were poplar (Populus spp.), paper birch (Betula payrifera Marsh.), black spruce (Picea mariana Mill.), and willow (Salix spp.). Significant differences in occurrence related to environmental conditions were observed for most functional groups. Root excavation showed that tree roots exceeded the depth of the protective layer and started to reach the moisture-retaining layer; in 2008, root average depth was 0.4 m and the maximal root depth was 1.7 m.

  14. USArray Receiver Function Imaging of Multiple-Layer Crustal Structure of the Contiguous United States

    NASA Astrophysics Data System (ADS)

    Ma, X.; Lowry, A. R.; Ravat, D.

    2014-12-01

    Thickness andseismic velocity of crustal layers are useful for understanding the history and evolution of continental lithosphere. Lowry and Pérez-Gussinyé (2011) observed that low bulk crustal seismic velocity ratio, Vp/Vs, strongly correlates with high geothermal gradient and active deformation, indicating quartz (to which Vp/Vs is most sensitive) plays a role in these processes. The lower crust (where ductile flow occurs which might explain the relationship) is commonly thought to be quartz-poor. However, layering of the crust may represent changes in either lithology or the phase of quartz. Laboratory strain-stress experiments on quartz indicate that near the a- to b-quartz phase transition, both Vp and Vp/Vs initially drop dramatically but then increase relative to the a-quartz regime because Young's modulus initially decreases by 30% before increasing by a net ~20%. Shear modulus varies only ~3% across the transition. Crustal structure is commonly represented by an upper, mid- and lower layer (e.g., Crust1.0) and conceptualized as primarily reflecting a change to more mafic lithology at greater depth, but estimates of Moho temperature indicate a quartz phase transition should be present in much of the western and central U.S. We have imaged multiple layering of the contiguous U.S. by applying a new cross-correlation and stacking method to USArray receiver functions. Synthetic models of a multiple layer crust indicate 'splitting' of converted-phase arrivals would be expected if a quartz phase transition were responsible. Preliminary imaging using cross-correlation of observed receiver functions with multiple layer synthetics demonstrates a marked improvement in correlation coefficients relative to a single-layer crust. In this presentation we will examine observational evidence for possible a- to b- phase transition layering (indicating quartz at depth) and compare with depths predicted for the quartz phase transition based on Pn-derived Moho temperatures and estimates of magnetic Curie depths.

  15. Depth-profile investigations of triterpenoid varnishes by KrF excimer laser ablation and laser-induced breakdown spectroscopy

    NASA Astrophysics Data System (ADS)

    Theodorakopoulos, C.; Zafiropulos, V.

    2009-07-01

    The ablation properties of aged triterpenoid dammar and mastic films were investigated using a Krypton Fluoride excimer laser (248 nm, 25 ns). Ablation rate variations between surface and bulk layers indicated changes of the ablation mechanisms across the depth profiles of the films. In particular, after removal of the uppermost surface varnish layers there was a reduction of the ablation step in the bulk that was in line with a significant reduction of carbon dimer emission beneath the surface layers as detected by laser-induced breakdown spectroscopy. The results are explicable by the generation of condensation, cross-linking and oxidative gradients across the depth profile of triterpenoid varnish films during the aging degradation process, which were recently quantified and established on the molecular level.

  16. Silver/oxygen depth profile in coins by using laser ablation, mass quadrupole spectrometer and X-rays fluorescence

    NASA Astrophysics Data System (ADS)

    Cutroneo, M.; Torrisi, L.; Caridi, F.; Sayed, R.; Gentile, C.; Mondio, G.; Serafino, T.; Castrizio, E. D.

    2013-05-01

    Silver coins belonging to different historical periods were investigated to determine the Ag/O atomic ratio depth profiles. Laser ablation has been employed to remove, in high vacuum, the first superficial layers of the coins. Mass quadrupole spectrometry has been used to detect the Ag and the O atomic elements vaporized from the coin surface. The depth profile allowed to determine the thickness of the oxidation layer indicating that, in general, it is high in old coins. A complementary technique, using scanning electron microscope and the associated XRF microprobe, have been devoted to confirm the measurements of Ag/O atomic ratio measured with the laser-coupled mass spectrometry. The oxidation layer thicknesses range between about 25 and 250 microns.

  17. Short-term visual deprivation can enhance spatial release from masking.

    PubMed

    Pagé, Sara; Sharp, Andréanne; Landry, Simon P; Champoux, François

    2016-08-15

    This research aims to study the effect of short-term visual deprivation on spatial release from masking, a major component of the cocktail party effect that allows people to detect an auditory target in noise. The Masking Level Difference (MLD) test was administered on healthy individuals over three sessions: before (I) and after 90min of visual deprivation (II), and after 90min of re-exposure to light (III). A non-deprived control group performed the same tests, but remained sighted between sessions I and II. The non-deprived control group displayed constant results across sessions. However, performance in the MLD test was improved following short-term visual deprivation and performance returned to pre-deprivation values after light re-exposure. This study finds that short-term visual deprivation transiently enhances the spatial release from masking. These data suggest the significant potential for enhancing a process involved in the cocktail party effect in normally developing individuals and adds to an emerging literature on the potential to enhance auditory ability after only a brief period of visual deprivation. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  18. Tropical warm pool rainfall variability and impact on upper ocean variability throughout the Madden-Julian oscillation

    NASA Astrophysics Data System (ADS)

    Thompson, Elizabeth J.

    Heating and rain freshening often stabilize the upper tropical ocean, bringing the ocean mixed layer depth to the sea surface. Thin mixed layer depths concentrate subsequent fluxes of heat, momentum, and freshwater in a thin layer. Rapid heating and cooling of the tropical sea surface is important for controlling or triggering atmospheric convection. Ocean mixed layer depth and SST variability due to rainfall events have not been as comprehensively explored as the ocean's response to heating or momentum fluxes, but are very important to understand in the tropical warm pool where precipitation exceeds evaporation and many climate phenomena such as ENSO and the MJO (Madden Julian Oscillation) originate. The first part of the dissertation investigates tropical, oceanic convective and stratiform rainfall variability and determines how to most accurately estimate rainfall accumulation with radar from each rain type. The second, main part of the dissertation uses central Indian Ocean salinity and temperature microstructure measurements and surrounding radar-derived rainfall maps throughout two DYNAMO MJO events to determine the impact of precipitating systems on upper-ocean mixed layer depth and resulting SST variability. The ocean mixed layer was as shallow as 0-5 m during 528/1071 observation hours throughout 2 MJOs (54% of the data record). Out of 43 observation days, thirty-eight near-surface mixed layer depth events were attributed to freshwater stabilization, called rain-formed mixed layers (RFLs). Thirty other mixed layer stratification events were classified as diurnal warm layers (DWLs) due to stable temperature stratification by daytime heating. RFLs and DWLs were observed to interact in two ways: 1) RFLs fill preexisting DWLs and add to total near-surface mixed layer stratification, which occurred ten times; 2) RFLs last long enough to heat, creating a new DWL on top of the RFL, which happened nine times. These combination stratification events were responsible for the highest SST warming rates and some of the highest SSTs leading up to the most active precipitation and wind stage of the each MJO. DWLs without RFL interaction helped produce the highest SSTs in suppressed MJO conditions. As storm intensity, frequency, duration, and the ability of storms to maintain stratiform rain areas increased, RFLS became more common in the disturbed and active MJO phases. Along with the barrier layer, DWL and RFL stratification events helped suppress wind-mixing, cooling, and mixed layer deepening throughout the MJO. We hypothesize that both salinity and temperature stratification events, and their interactions, are important for controlling SST variability and therefore MJO initiation in the Indian Ocean. Most RFLs were caused by submesoscale and mesoscale convective systems with stratiform rain components and local rain accumulations above 10 mm but with winds mostly below 8 m s-1. We hypothesize that the stratiform rain components of storms helped stratify the ocean by providing weak but widespread, steady, long-lived freshwater fluxes. Although generally limited to rain rates ≤ 10 mm hr-1, it is demonstrated that stratiform rain can exert a strong buoyancy flux into the ocean, i.e. as high as maximum daytime solar heating. Storm morphology and the preexisting vertical structure of ocean stability were critical in determining ocean mixed layer depth variability in the presence of rain. Therefore, we suggest that high spatial and temporal resolution coupled ocean-atmosphere models that can parameterize or resolve storm morphology as well as ocean mixed layer and barrier layer evolution are needed to reproduce the diurnal and intraseasonal SST variability documented throughout the MJO.

  19. Evidence for Coseismic Rupture Beyond the Base of the Seismogenic Layer

    NASA Astrophysics Data System (ADS)

    Zielke, O.; Wesnousky, S.

    2010-12-01

    For scientific reasons and hazard assessment it is important to better understand the physics and rupture characteristics of large, destructive earthquakes. However, those events occur infrequently, severely obstructing their analysis. Smaller but more frequent earthquakes are usually studied and their characteristics are extrapolated to assess large earthquake behavior, assuming that small and large events are associated with the same physical processes and parameters. For small and moderate size earthquakes it was observed and independently derived from elastic models that coseismic stress drop is independent of earthquake size and that slip is proportional to the smallest rupture dimension. It is therefore assumed that large earthquake stress drops are essentially equal to the stress drop of their smaller size siblings. It is further assumed that the slip amount of large events does not further increase once it ruptures the full seismogenic layer--the base of the seismogenic layer is commonly thought to limit the earthquake down-dip rupture extend and thus defines the smallest rupture dimension. However, slip observations for many large strike-slip events show how offset gradually increases with rupture length. Two explanations have been formulated: If the rupture width of those events were indeed limited by the base of the seismogenic layer, the observations would imply larger stress drops and possibly other processes involved in large earthquake rupture, questioning the validity of the aforementioned extrapolation from small to large earthquakes. On the other hand, if rupture width of large earthquakes were not limited by the base of the seismogenic layer but were allowed to extend further down (as suggested by recent studies), the increased slip amount may be explained without an increase in stress drop or additional rupture mechanisms for large earthquakes. For the study we present here, we analyzed seismic data constraining the depth extent of large earthquakes relative to the depth of the seismogenic base. We utilized time series data of aftershock depths for a number of large strike-slip earthquakes, generating aftershock time vs. depth histograms to investigate the temporal variation in depth distribution. Based on hypocenter depth of small earthquakes along the Landers fault (causing the 1992 M7.3 Landers earthquake), we identified the base of the seismogenic layer at ~10km. Aftershocks that occurred only days after the Landers earthquake had maximum depths of ~18km, suggesting that rupture of the main shock extended this far down and therefore went well below the base of the seismogenic layer. Maximum aftershock depth then decayed roughly logarithmically, reaching the previous value of ~10km after about 5.5years. We argue that these observations are a logical consequence of the visco-elastic rheology of crustal rocks: Coseismically highly increased strains elevate the crustal stiffness, temporarily lowering the base of the seismogenic layer and permitting initiation of slip instabilities at depths that are otherwise characterized by viscous behavior. Extrapolation from small to large earthquakes is therefore permitted. No additional stress drop or rupture mechanism is required to explain the data.

  20. Electrophysiological mapping of the accessory olfactory bulb of the rabbit (Oryctolagus cuniculus).

    PubMed

    van Groen, T; Ruardy, L; da Silva, F H

    1986-07-01

    Field potentials elicited by electrical stimulation of the vomeronasal nerve were measured in the accessory olfactory bulb of the rabbit. Maps were made of the distribution of surface field potentials and of the corresponding depth profiles. The surface maps followed closely the contours of the accessory olfactory bulb: at the frontal border the field potential tended to zero and at the center of the structure the field potential attained a maximum. Depth profiles of the field potentials through the accessory olfactory bulb presented a surface-negative wave and, in depth, a positive wave. The polarity reversal occurred at the deep part of the granule cell layer. The zero equipotential line followed closely the curvature of the granule cell layer. Current source density analysis of the depth profiles revealed a main sink at the external plexiform and granule cell layers. This indicates that the main activity in the accessory olfactory bulb is generated by the synapses between the mitral cells and the granule cells as is found in the main olfactory bulb.

  1. Observations of the Summertime Boundary Layer over the Ross Ice Shelf, Antarctica Using SUMO UAVs

    NASA Astrophysics Data System (ADS)

    Nigro, M. A.; Cassano, J. J.; Jolly, B.; McDonald, A.

    2014-12-01

    During January 2014 Small Unmanned Meteorological Observer (SUMO) unmanned aerial vehicles (UAVs) were used to observe the boundary layer over the Ross Ice Shelf, Antarctica. A total of 41 SUMO flights were completed during a 9-day period with a maximum of 11 flights during a single day. Flights occurred as frequently as every 1.5 hours so that the time evolution of the boundary layer could be documented. On almost all of the flights the boundary layer was well mixed from the surface to a depth of less than 50 m to over 350 m. The depth of the well-mixed layer was observed to both increase and decrease over the course of an individual day suggesting that processes other than entrainment were altering the boundary layer depth. The well-mixed layer was observed to both warm and cool during the field campaign indicating that advective processes as well as surface fluxes were acting to control the temporal evolution of the boundary layer temperature. Only a small number of weakly stably stratified boundary layers were observed. Strong, shallow inversions, of up to 6 K, were observed above the top of the boundary layer. Observations from a 30 m automatic weather station and two temporary automatic weather stations 10 km south and west of the main field campaign location provide additional data for understanding the boundary layer evolution observed by the SUMO UAVs during this 9-day period. This presentation will discuss the observed evolution of the summertime boundary layer as well as comment on lessons learned operating the SUMO UAVs at a remote Antarctic field camp.

  2. Radiative Effects of Aerosols

    NASA Technical Reports Server (NTRS)

    Valero, Francisco P. J.

    1996-01-01

    During the Atlantic Stratocumulus Transition Experiment (ASTEX) in June 1992, two descents in cloud-free regions allowed comparison of the change in aerosol optical depth as determined by an onboard total-direct-diffuse radiometer (TDDR) to the change calculated from measured size-resolved aerosol microphysics and chemistry. Both profiles included a pollution haze from Europe but the second also included the effect of a Saharan dust layer above the haze. The separate contributions of supermicrometer (coarse) and submicrometer (fine) aerosol were determined and thermal analysis of the pollution haze indicated that the fine aerosol was composed primarily of a sulfate/water mixture with a refractory soot-like core. The soot core increased the calculated extinction by about 10% in the most polluted drier layer relative to a pure sulfate aerosol but had significantly less effect at higher humidities. A 3 km descent through a boundary layer air mass dominated by pollutant aerosol with relative humidities (RH) 10-77% yielded a close agreement between the measured and calculated aerosol optical depths (550 nm) of 0.160 (+/- 0.07) and 0. 157 (+/- 0.034) respectively. During descent the aerosol mass scattering coefficient per unit sulfate mass varied from about 5 to 16 m(exp 2)/g and primarily dependent upon ambient RH. However, the total scattering coefficient per total fine mass was far less variable at about 4+/- 0.7 m(exp 2)/g. A subsequent descent through a Saharan dust layer located above the pollution aerosol layer revealed that both layers contributed similarly to aerosol optical depth. The scattering per unit mass of the coarse aged dust was estimated at 1.1 +/- 0.2 m(exp 2)/g. The large difference (50%) in measured and calculated optical depth for the dust layer exceeded measurements.

  3. Rank order scaling of pictorial depth

    PubMed Central

    van Doorn, Andrea; Koenderink, Jan; Wagemans, Johan

    2011-01-01

    We address the topic of “pictorial depth” in cases of pictures that are unlike photographic renderings. The most basic measure of “depth” is no doubt that of depth order. We establish depth order through the pairwise depth-comparison method, involving all pairs from a set of 49 fiducial points. The pictorial space for this study was evoked by a capriccio (imaginary landscape) by Francesco Guardi (1712–1793). In such a drawing pictorial space is suggested by the artist through a small set of conventional depth cues. As a result typical Western observers tend to agree largely in their visual awareness when looking at such art. We rank depths for locations that are not on a single surface and far apart in pictorial space. We find that observers resolve about 40 distinct depth layers and agree largely in this. From a previous experiment we have metrical data for the same observers. The rank correlations between the results are high. Perhaps surprisingly, we find no correlation between the number of distinct depth layers and the total metrical depth range. Thus, the relation between subjective magnitude and discrimination threshold fails to hold for pictorial depth. PMID:23145256

  4. The distribution and stratification of persistent organic pollutants and fatty acids in bottlenose dolphin (Tursiops truncatus) blubber.

    PubMed

    Ellisor, Debra; McLellan, William; Koopman, Heather; Schwacke, Lori; McFee, Wayne; Kucklick, John

    2013-10-01

    Blubber has been used for decades to monitor exposure of marine mammals to persistent organic pollutants (POPs). However, little is known about POP variability as a function of blubber depth and across the body of the animal. Remote blubber biopsy sampling (e.g, projectile biopsy) is the most common technique used to acquire samples from free-swimming animals, yet such techniques may result in variable sampling. It is important to understand whether blubber stratification or body location affects POP concentration or the concentration of other important blubber constituents such as fatty acids (FA). To investigate the influence of sampling depth and location on POP concentration, full depth blubber samples were taken from one stranded bottlenose dolphin (Tursiops truncatus) at six different body sites to assess variation in FA distribution and contaminant storage with body location. Three of the samples from different body locations were separated into histologically distinct layers to examine the effect of blubber depth and body location on POPs and FAs. In this individual, both POPs and FAs were heterogeneous with blubber depth and body location. POP concentrations were significantly greater in ventral (average ΣPBDEs 1350 ng/g lipid) and anterior (average ΣPCBs 28,700 ng/g lipid) body locations and greater in the superficial blubber layer (average ΣPCBs 35,500 ng/g lipid) when compared to the deep (8390 ng/g lipid) and middle (23,700 ng/g lipid) layers. Proportionally more dietary FAs were found in dorsal blubber and in middle and deep layers relative to other locations while the reverse was true for biosynthesized FAs. Stratification was further examined in blubber from the same body location in five additional stranded bottlenose dolphins. Although FAs were stratified with blubber depth, lipid-normalized POPs were not significantly different with depth, indicating that POP concentrations can vary in an individual with blubber depth though the direction of POP stratification is not consistent among individuals. Published by Elsevier B.V.

  5. Monitoring of active layer thermal regime and depth on CALM-S site, James Ross Island, Eastern Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Hrbáček, Filip; Kňažková, Michaela; Nývlt, Daniel; Láska, Kamil; Mueller, Carsten W.; Ondruch, Jakub

    2017-04-01

    Active layer thickness and its dynamic are considered one of the key parameters of permafrost-affected ground. They variability are very sensitive to specific local conditions, especially climate, vegetation, snow cover or soil texture and moisture. To better understand the local variability of active layer thickness in Antarctica, the original Circumpolar Active Layer Monitoring protocol (CALM) was adapted as its southern form (CALM-S) with respect to specific conditions of Antarctica. To date, almost 40 CALM-S sites were registered across the Antarctic continent with the highest density on western Antarctic Peninsula (South Shetlands) and Victoria Land in East Antarctica (McMurdo region). On James Ross Island, CALM-S site was established in February 2014 as the first CALM-S in the eastern Antarctic Peninsula region. The CALM-S site is located near the Johann Gregor Mendel Station on the northern coast of James Ross Island. The area delimited to 80 × 70 m is elevated at 8 to 11 m asl. Geologically it consists of a Holocene marine terrace ( 80% of CALM-S area) with typical sandy material and passes to lithified to poorly disintegrated sedimentary rocks of Cretaceous Whisky Bay Formation ( 20% of CALM-S area) with a more muddy material and a typical bimodal composition. For both geologically different parts of CALM-S site, ground temperature was measured at two profiles at several levels up to 200 cm depth using resistance thermometers Pt100/8 (accuracy ± 0.15 °C). The air temperature at 2 m above surface was monitored at the automatic weather station near Johann Gregor Mendel Station using resistance thermometer Pt100/A (accuracy ± 0.15 °C). Data used in this study were obtained during the period from 1 March 2013 to 6 February 2016. Mechanical probing of active layer depth was performed in 72 grid points at the end of January, or beginning of February in 2014 to 2016. During the whole study period, mean annual air temperature varied between -7.0 °C (2013) and -6.7 °C (2015), while the mean annual ground temperature at 5 cm ranged from -5.6 °C (2013) to -5.3 °C (2014). Thawing season started in mid-November between 17th (2013/14) and 24th (2014/15) and ended at the end of February (22nd in 2014/15) and beginning of March (7th in 2013/14). The maximum active layer thickness determined from 0°C isotherm varied from 86 to 87 cm at profile 1, while it reached only 51 to 65 cm at profile 2. The mean probed active layer depth varied between 66 cm (2013/4) and 78 cm (2014/15). The maximum probed active layer depth increased from 100 cm in 2014 to 113 cm in 2016. High variability of active layer depth across CALM-S site was caused by different ground thermal properties of Holocene marine terrace sand and Cretaceous clayey sandstones. These results differ significantly from another CALM-S sites in Antarctica, where the main factors affecting thawing depth variability were snow cover and topography. These results confirmed previous observation from James Ross Island, where variability of active layer depth was related primarily to different ground properties (texture, moisture, physical characteristic) then local climate or snow cover.

  6. An equilibrium model for the coupled ocean-atmosphere boundary layer in the tropics

    NASA Technical Reports Server (NTRS)

    Sui, C.-H.; Lau, K.-M.; Betts, Alan K.

    1991-01-01

    An atmospheric convective boundary layer (CBL) model is coupled to an ocean mixed-layer (OML) model in order to study the equilibrium state of the coupled system in the tropics, particularly in the Pacific region. The equilibrium state of the coupled system is solved as a function of sea-surface temperature (SST) for a given surface wind and as a function of surface wind for a given SST. It is noted that in both cases, the depth of the CBL and OML increases and the upwelling below the OML decreases, corresponding to either increasing SST or increasing surface wind. The coupled ocean-atmosphere model is solved iteratively as a function of surface wind for a fixed upwelling and a fixed OML depth, and it is observed that SST falls with increasing wind in both cases. Realistic gradients of mixed-layer depth and upwelling are observed in experiments with surface wind and SST prescribed as a function of longitude.

  7. Regolith stratigraphy at the Chang'E-3 landing site as seen by lunar penetrating radar

    NASA Astrophysics Data System (ADS)

    Fa, Wenzhe; Zhu, Meng-Hua; Liu, Tiantian; Plescia, Jeffrey B.

    2015-12-01

    The Chang'E-3 lunar penetrating radar (LPR) observations at 500 MHz reveal four major stratigraphic zones from the surface to a depth of ~20 m along the survey line: a layered reworked zone (<1 m), an ejecta layer (~2-6 m), a paleoregolith layer (~4-11 m), and the underlying mare basalts. The reworked zone has two to five distinct layers and consists of surface regolith. The paleoregolith buried by the ejecta from a 500 m crater is relatively homogenous and contains only a few rocks. Population of buried rocks increases with depth to ~2 m at first, and then decreases with depth, representing a balance between initial deposition of the ejecta and later turnover of the regolith. Combining with the surface age, the LPR observations indicate a mean accumulation rate of about 5-10 m/Gyr for the surface regolith, which is at least 4-8 times larger than previous estimation.

  8. Compositional depth profile of a native oxide LPCVD MNOS structure using X-ray photoelectron spectroscopy and chemical etching

    NASA Technical Reports Server (NTRS)

    Wurzbach, J. A.; Grunthaner, F. J.

    1983-01-01

    It is pointed out that there is no report of an unambiguous analysis of the composition and interfacial structure of MNOS (metal-nitride oxide semiconductor) systems, despite the technological importance of these systems. The present investigation is concerned with a study of an MNOS structure on the basis of a technique involving the use of X-ray photoelectron spectroscopy (XPS) with a controlled stopped-flow chemical-etching procedure. XPS is sensitive to the structure of surface layers, while stopped-flow etching permits the controlled removal of overlying material on a scale of atomic layers, to expose new surface layers as a function of thickness. Therefore, with careful analysis of observed intensities at measured depths, this combination of techniques provides depth resolution between 5 and 10 A. According to the obtained data there is intact SiO2 at the substrate interface. There appears to be a thin layer containing excess bonds to silicon on top of the SiO2.

  9. Impact of the geological structures on the groundwater potential using geophysical techniques in West Bani Mazar area, El Minia - Western Desert, Egypt

    NASA Astrophysics Data System (ADS)

    Mahmoud, Hussein Hosni; Kotb, Adel Diab Mohammed

    2017-06-01

    Establishment of the new agricultural projects in west Bani Mazar area, El Minia, Egypt needs a good knowledge about groundwater. Groundwater serves as the unique source of water supplies in the study area. Vertical Electrical Sounding technique is a convenient tool for groundwater exploration. This technique was utilized to illustrate the geoelectric succession, vertical and spatial extensions of the encountered layers, depth to water bearing layers and the structures affecting these layers. Profiling technique was carried out along a grid pattern using different half current electrode spacings (150 m, 300 m and 500 m) to clarify changes in resistivity values throughout the study area at different depths. Geoelectric layers B1 and B2 of the saturated zone are suitable for groundwater extraction in the study area. The resistivity values of the geoelectric layer B1 decrease towards the West direction, they decrease from 23.0 Ωm to 16.0 Ωm; and its thicknesses increase towards the SE direction from 12.0 m to 18.0 m. Whereas, the resistivity values of the geoelectric layer B2 decrease towards the NW direction from 40.0 Ωm to 26.5 Ωm; and its thicknesses vary from 34.0 m to 40.0 m. The depths to the upper surface of the water bearing layer B1 increase towards the NW direction from 44.0 m to 89.4 m. Based on the results obtained from the Vertical Electrical Soundings, four two-dimensional resistivity imaging profiles were measured at the selected sites. These 2-D resistivity profiles aim to determine depths to the water bearing layers, their thicknesses and the shallow structure. The inverted models of these profiles matched with the geoelectric sequence at these sites. In addition, a normal fault is detected at the northwestern part of the study area. According to the results obtained from this study it is clear that the groundwater in the area under consideration is occurred in the fractured limestone layers that belong to Eocene Age. Resistivity values of the water bearing layers increase with depth as a result of decreasing fracture density; and these values decreased towards the northwestern direction due to their proximity from the fault zone. The groundwater potential of these layers depends mainly on the lithologic composition and the geological structures affecting these layers. The secondary porosity of these limestone layers depends mainly on the degree of fracturing and fissuring. The proper sites to drill new productive wells were recommended, and the obtained data from drilling new well in the southeastern part of the study area coincide with the interpreted data of the different geophysical techniques.

  10. SU-E-T-289: Dose-Volume-Effect Relationships for Lung Cancer Patients Treated with SBRT On a Prospective Protocol

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mayyas, E; Brown, S; Liu, J

    Purpose: Stereotactic body radiotherapy (SBRT) is commonly used to treat early stage lung tumors. This study was designed to evaluate associations between dose, volume and clinical outcomes including analysis of both clinical toxicity scores and quality of life (QOL) data for non-small cell lung cancer patients treated with SBRT. Preliminary results are presented. Methods: Sixty-seven NSCLC patients, 46 primarily with early stage, and 21 with recurrent disease were treated with dose regimens consisting mainly of 12 Gy x 4 fractions, and 3 or 5 fractions at lower dose, for patients with recurrent disease (Table 1). Follow-up data is being collectedmore » at baseline, after treatment and at 3, 6, 12, 18 and 24 months post-treatment. Clinical follow-up data acquired to date was assessed using the Charlson Comorbidity Clinical and Toxicity Scoring forms. QOL data was evaluated using the EQ-5D, and FACT-TOI validated surveys. All outcomes surveys are collected within an “in-house” developed outcomes database. Results: The median follow-up was 3.5±0.8 months. Mean lung doses (MLD) were converted to BED-2 Gy using the linear-quadratic model with an alpha/beta=3.0. Average MLD was 3.7+3.1 Gy (range: 0.4–20.9 Gy). The percentages of patients with > grade 2 cough, dyspnea and fatigue were 13.3, 17.0, 6.3%, respectively. Preliminary analyses (at 3 months after SBRT) show a mild correlation between MLD > 2 Gy and > grade 2 cough (borderline significant) and dyspnea (significant, p<0.05). One patient was observed with a grade 3 cough. Given the short follow-up, tumor control is not yet assessable. Conclusion: The SBRT dose fractionation regimen of 12 Gy x 4 was well tolerated at early time points. Additional follow-up is required to assess the long-term clinical outcome efficacy and toxicity profiles of the dose regimen.« less

  11. High-Average-Power Diffraction Pulse-Compression Gratings Enabling Next-Generation Ultrafast Laser Systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Alessi, D.

    Pulse compressors for ultrafast lasers have been identified as a technology gap in the push towards high peak power systems with high average powers for industrial and scientific applications. Gratings for ultrashort (sub-150fs) pulse compressors are metallic and can absorb a significant percentage of laser energy resulting in up to 40% loss as well as thermal issues which degrade on-target performance. We have developed a next generation gold grating technology which we have scaled to the petawatt-size. This resulted in improvements in efficiency, uniformity and processing as compared to previous substrate etched gratings for high average power. This new designmore » has a deposited dielectric material for the grating ridge rather than etching directly into the glass substrate. It has been observed that average powers as low as 1W in a compressor can cause distortions in the on-target beam. We have developed and tested a method of actively cooling diffraction gratings which, in the case of gold gratings, can support a petawatt peak power laser with up to 600W average power. We demonstrated thermo-mechanical modeling of a grating in its use environment and benchmarked with experimental measurement. Multilayer dielectric (MLD) gratings are not yet used for these high peak power, ultrashort pulse durations due to their design challenges. We have designed and fabricated broad bandwidth, low dispersion MLD gratings suitable for delivering 30 fs pulses at high average power. This new grating design requires the use of a novel Out Of Plane (OOP) compressor, which we have modeled, designed, built and tested. This prototype compressor yielded a transmission of 90% for a pulse with 45 nm bandwidth, and free of spatial and angular chirp. In order to evaluate gratings and compressors built in this project we have commissioned a joule-class ultrafast Ti:Sapphire laser system. Combining the grating cooling and MLD technologies developed here could enable petawatt laser systems to operate at 50kW average power.« less

  12. Advanced 2-dimensional quantitative coronary angiographic analysis for prediction of fractional flow reserve in intermediate coronary stenoses.

    PubMed

    Opolski, Maksymilian P; Pregowski, Jerzy; Kruk, Mariusz; Kepka, Cezary; Staruch, Adam D; Witkowski, Adam

    2014-07-01

    The widespread clinical application of coronary computed tomography angiography (CCTA) has resulted in increased referral patterns of patients with intermediate coronary stenoses to invasive coronary angiography. We evaluated the application of advanced quantitative coronary angiography (A-QCA) for predicting fractional flow reserve (FFR) in intermediate coronary lesions detected on CCTA. Fifty-six patients with 66 single intermediate coronary lesions (≥ 50% to 80% stenosis) on CCTA prospectively underwent coronary angiography and FFR. A-QCA including calculation of the Poiseuille-based index defined as the ratio of lesion length to the fourth power of the minimal lumen diameter (MLD) was performed. Significant stenosis was defined as FFR ≤ 0.80. The mean FFR was 0.86 ± 0.09, and 18 lesions (27%) were functionally significant. FFR correlated with lesion length (R=-0.303, P=0.013), MLD (R=0.527, P<0.001), diameter stenosis (R=-0.404, P=0.001), minimum lumen area (MLA) (R=0.530, P<0.001), lumen stenosis (R=-0.400, P=0.001), and Poiseuille-based index (R=-0.602, P<0.001). The optimal cutoff values for MLD, MLA, diameter stenosis, and lumen stenosis were ≤ 1.3 mm, ≤ 1.5 mm, >44%, and >69%, respectively (maximum negative predictive value of 94% for MLA, maximum positive predictive value of 58% for diameter stenosis). The Poiseuille-based index was the most accurate (C statistic 0.86, sensitivity 100%, specificity 71%, positive predictive value 56%, and negative predictive value 100%) predictor of FFR ≤ 0.80, but showed the lowest interobserver agreement (intraclass correlation coefficient 0.37). A-QCA might be used to rule out significant ischemia in intermediate stenoses detected by CCTA. The diagnostic application of the Poiseuille-based angiographic index is precluded by its high interobserver variability.

  13. Sedative and antinociceptive effects of different combinations of detomidine and methadone in standing horses.

    PubMed

    Gozalo-Marcilla, Miguel; Luna, Stelio Pl; Crosignani, Nadia; Filho, José Np Puoli; Possebon, Fábio S; Pelligand, Ludovic; Taylor, Polly M

    2017-09-01

    To evaluate intravenous (IV) detomidine with methadone in horses to identify a combination which provides sedation and antinociception without adverse effects. Randomized, placebo-controlled, blinded, crossover. A group of eight adult healthy horses aged (mean ± standard deviation) 7 ± 2 years and 372 ± 27 kg. A total of six treatments were administered IV: saline (SAL); detomidine (5 μg kg -1 ; DET); methadone (0.2 mg kg -1 ; MET) alone or combined with detomidine [2.5 (MLD), 5 (MMD) or 10 (MHD) μg kg -1 ]. Thermal, mechanical and electrical nociceptive thresholds were measured, and sedation, head height above ground (HHAG), cardiopulmonary variables and intestinal motility were evaluated at 5, 15, 30, 45, 60, 75, 90, 120 and 180 minutes. Normal data were analyzed by mixed-model analysis of variance and non-normal by Kruskal-Wallis (p < 0.05). Nociceptive thresholds in horses administered methadone with the higher doses of detomidine (MMD, MHD) were increased above baseline to a greater degree and for longer duration (MMD: 15-30 minutes, MHD: 30-60 minutes) than in horses administered low dose with methadone or detomidine alone (MLD, DET: 5-15 minutes). No increases in nociceptive thresholds were recorded in SAL or MET. Compared with baseline, HHAG was lower for 30 minutes in MMD and DET, and for 45 minutes in MHD. No significant sedation was observed in SAL, MET or MLD. Intestinal motility was reduced for 75 minutes in MHD and for 30 minutes in all other treatments. Methadone (0.2 mg kg -1 ) potentiated the antinociception produced by detomidine (5 μg kg -1 ), with minimal sedative effects. Detomidine (5 μg kg -1 ) with methadone (0.2 mg kg -1 ) produced antinociception without the adverse effects of higher doses of detomidine. Copyright © 2017 Association of Veterinary Anaesthetists and American College of Veterinary Anesthesia and Analgesia. Published by Elsevier Ltd. All rights reserved.

  14. The combined effects of genetic risk and perceived discrimination on blood pressure among African Americans in the Jackson Heart Study

    PubMed Central

    Taylor, Jacquelyn Y.; Sun, Yan V.; Barcelona de Mendoza, Veronica; Ifatunji, Mosi; Rafferty, Jane; Fox, Ervin R.; Musani, Solomon K.; Sims, Mario; Jackson, James S.

    2017-01-01

    Abstract Both genomics and environmental stressors play a significant role in increases in blood pressure (BP). In an attempt to further explain the hypertension (HTN) disparity among African Americans (AA), both genetic underpinnings (selected candidate genes) and stress due to perceived racial discrimination (as reported in the literature) have independently been linked to increased BP among AAs. Although Gene x Environment interactions on BP have been examined, the environmental component of these investigations has focused more on lifestyle behaviors such as smoking, diet, and physical activity, and less on psychosocial stressors such as perceived discrimination. The present study uses candidate gene analyses to identify the relationship between Everyday Discrimination (ED) and Major Life Discrimination (MLD) with increases in systolic BP (SBP) and diastolic BP (DBP) among AA in the Jackson Heart Study. Multiple linear regression models reveal no association between discrimination and BP after adjusting for age, sex, body mass index (BMI), antihypertensive medication use, and current smoking status. Subsequent candidate gene analysis identified 5 SNPs (rs7602215, rs3771724, rs1006502, rs1791926, and rs2258119) that interacted with perceived discrimination and SBP, and 3 SNPs (rs2034454, rs7602215, and rs3771724) that interacted with perceived discrimination and DBP. Most notably, there was a significant SNP × discrimination interaction for 2 SNPs on the SLC4A5 gene: rs3771724 (MLD: SBP P = .034, DBP P = .031; ED: DBP: P = .016) and rs1006502 (MLD: SBP P = .034, DBP P = .030; ED: DBP P = .015). This study supports the idea that SNP × discrimination interactions combine to influence clinically relevant traits such as BP. Replication with similar epidemiological samples is required to ascertain the role of genes and psychosocial stressors in the development and expression of high BP in this understudied population. PMID:29069027

  15. The effect of soy protein beverages on serum cell adhesion molecule concentrations in prehypertensive/stage 1 hypertensive individuals.

    PubMed

    Dettmer, Michelle; Alekel, D Lee; Lasrado, Joanne A; Messina, Mark; Carriquiry, Alicia; Heiberger, Kevin; Stewart, Jeanne W; Franke, Warren

    2012-04-01

    Prehypertensive and hypertensive individuals are at increased risk of atherosclerotic cardiovascular disease (CVD), in part because hypertension contributes to endothelial dysfunction and increased cell adhesion molecule expression. Soy protein and isoflavones may favorably alter CVD risk factors, and hence the aim of this study was to determine whether intake of cow's milk compared with soy beverage prepared from whole soy bean (WSB) or soy protein isolate (SPI) would lower soluble cell adhesion molecule concentrations as a means of decreasing CVD risk. We enrolled healthy prehypertensive/stage 1 hypertensive men (n = 60; 18-63 years) and premenopausal women (n = 8; 20-48 years). Participants were randomized to 1 of 3 groups for 8 weeks: cow's milk (600 mL/d), SPI beverage (840 mL/d; 30.1 mg total isoflavones/d), or WSB beverage (840 mL/d; 91.4 mg total isoflavones/d). We measured soluble vascular cell adhesion molecule-1 (VCAM-1), intercellular cell adhesion molecule-1 (ICAM-1), and endothelial-leukocyte adhesion molecule-1 (E-selectin) concentrations at baseline and week 8. Soluble CAM concentrations were not altered by treatment and did not differ between prehypertensive and hypertensive participants. However, analysis of variance indicated a treatment × gender interaction (gender effect) for ICAM-1 (p = 0.0037) but not for E-selectin (p = 0.067) or VCAM-1 (p = 0.16). Men had higher concentrations of ICAM-1 and E-selectin, respectively, at baseline (p = 0.0071, p = 0.049) and week 8 (p = 0.0054, p = 0.038) than women did. Neither intake of cow's milk nor soy beverage for 8 weeks altered soluble CAM concentrations in prehypertensive/stage 1 hypertensive individuals, suggesting that neither type of beverage diminished atherosclerotic CVD risk in mildly hypertensive individuals by way of improving circulating CAM concentrations.

  16. A new functional method to choose the target lobe for lung volume reduction in emphysema - comparison with the conventional densitometric method.

    PubMed

    Hetzel, Juergen; Boeckeler, Michael; Horger, Marius; Ehab, Ahmed; Kloth, Christopher; Wagner, Robert; Freitag, Lutz; Slebos, Dirk-Jan; Lewis, Richard Alexander; Haentschel, Maik

    2017-01-01

    Lung volume reduction (LVR) improves breathing mechanics by reducing hyperinflation. Lobar selection usually focuses on choosing the most destroyed emphysematous lobes as seen on an inspiratory CT scan. However, it has never been shown to what extent these densitometric CT parameters predict the least deflation of an individual lobe during expiration. The addition of expiratory CT analysis allows measurement of the extent of lobar air trapping and could therefore provide additional functional information for choice of potential treatment targets. To determine lobar vital capacity/lobar total capacity (LVC/LTC) as a functional parameter for lobar air trapping using on an inspiratory and expiratory CT scan. To compare lobar selection by LVC/LTC with the established morphological CT density parameters. 36 patients referred for endoscopic LVR were studied. LVC/LTC, defined as delta volume over maximum volume of a lobe, was calculated using inspiratory and expiratory CT scans. The CT morphological parameters of mean lung density (MLD), low attenuation volume (LAV), and 15th percentile of Hounsfield units (15%P) were determined on an inspiratory CT scan for each lobe. We compared and correlated LVC/LTC with MLD, LAV, and 15%P. There was a weak correlation between the functional parameter LVC/LTC and all inspiratory densitometric parameters. Target lobe selection using lowest lobar deflation (lowest LVC/LTC) correlated with target lobe selection based on lowest MLD in 18 patients (50.0%), with the highest LAV in 13 patients (36.1%), and with the lowest 15%P in 12 patients (33.3%). CT-based measurement of deflation (LVC/LTC) as a functional parameter correlates weakly with all densitometric CT parameters on a lobar level. Therefore, morphological criteria based on inspiratory CT densitometry partially reflect the deflation of particular lung lobes, and may be of limited value as a sole predictor for target lobe selection in LVR.

  17. The combined effects of genetic risk and perceived discrimination on blood pressure among African Americans in the Jackson Heart Study.

    PubMed

    Taylor, Jacquelyn Y; Sun, Yan V; Barcelona de Mendoza, Veronica; Ifatunji, Mosi; Rafferty, Jane; Fox, Ervin R; Musani, Solomon K; Sims, Mario; Jackson, James S

    2017-10-01

    Both genomics and environmental stressors play a significant role in increases in blood pressure (BP). In an attempt to further explain the hypertension (HTN) disparity among African Americans (AA), both genetic underpinnings (selected candidate genes) and stress due to perceived racial discrimination (as reported in the literature) have independently been linked to increased BP among AAs. Although Gene x Environment interactions on BP have been examined, the environmental component of these investigations has focused more on lifestyle behaviors such as smoking, diet, and physical activity, and less on psychosocial stressors such as perceived discrimination.The present study uses candidate gene analyses to identify the relationship between Everyday Discrimination (ED) and Major Life Discrimination (MLD) with increases in systolic BP (SBP) and diastolic BP (DBP) among AA in the Jackson Heart Study. Multiple linear regression models reveal no association between discrimination and BP after adjusting for age, sex, body mass index (BMI), antihypertensive medication use, and current smoking status.Subsequent candidate gene analysis identified 5 SNPs (rs7602215, rs3771724, rs1006502, rs1791926, and rs2258119) that interacted with perceived discrimination and SBP, and 3 SNPs (rs2034454, rs7602215, and rs3771724) that interacted with perceived discrimination and DBP. Most notably, there was a significant SNP × discrimination interaction for 2 SNPs on the SLC4A5 gene: rs3771724 (MLD: SBP P = .034, DBP P = .031; ED: DBP: P = .016) and rs1006502 (MLD: SBP P = .034, DBP P = .030; ED: DBP P = .015).This study supports the idea that SNP × discrimination interactions combine to influence clinically relevant traits such as BP. Replication with similar epidemiological samples is required to ascertain the role of genes and psychosocial stressors in the development and expression of high BP in this understudied population.

  18. Automated quantification of pulmonary emphysema from computed tomography scans: comparison of variation and correlation of common measures in a large cohort

    NASA Astrophysics Data System (ADS)

    Keller, Brad M.; Reeves, Anthony P.; Yankelevitz, David F.; Henschke, Claudia I.

    2010-03-01

    The purpose of this work was to retrospectively investigate the variation of standard indices of pulmonary emphysema from helical computed tomographic (CT) scans as related to inspiration differences over a 1 year interval and determine the strength of the relationship between these measures in a large cohort. 626 patients that had 2 scans taken at an interval of 9 months to 15 months (μ: 381 days, σ: 31 days) were selected for this work. All scans were acquired at a 1.25mm slice thickness using a low dose protocol. For each scan, the emphysema index (EI), fractal dimension (FD), mean lung density (MLD), and 15th percentile of the histogram (HIST) were computed. The absolute and relative changes for each measure were computed and the empirical 95% confidence interval was reported both in non-normalized and normalized scales. Spearman correlation coefficients are computed between the relative change in each measure and relative change in inspiration between each scan-pair, as well as between each pair-wise combination of the four measures. EI varied on a range of -10.5 to 10.5 on a non-normalized scale and -15 to 15 on a normalized scale, with FD and MLD showing slightly larger but comparable spreads, and HIST having a much larger variation. MLD was found to show the strongest correlation to inspiration change (r=0.85, p<0.001), and EI, FD, and HIST to have moderately strong correlation (r = 0.61-0.74, p<0.001). Finally, HIST showed very strong correlation to EI (r = 0.92, p<0.001), while FD showed the least strong relationship to EI (r = 0.82, p<0.001). This work shows that emphysema index and fractal dimension have the least variability overall of the commonly used measures of emphysema and that they offer the most unique quantification of emphysema relative to each other.

  19. Generation of Human Induced Pluripotent Stem Cell‐Derived Bona Fide Neural Stem Cells for Ex Vivo Gene Therapy of Metachromatic Leukodystrophy

    PubMed Central

    Meneghini, Vasco; Sala, Davide; De Cicco, Silvia; Luciani, Marco; Cavazzin, Chiara; Paulis, Marianna; Mentzen, Wieslawa; Morena, Francesco; Giannelli, Serena; Sanvito, Francesca; Villa, Anna; Bulfone, Alessandro; Broccoli, Vania; Martino, Sabata

    2016-01-01

    Abstract Allogeneic fetal‐derived human neural stem cells (hfNSCs) that are under clinical evaluation for several neurodegenerative diseases display a favorable safety profile, but require immunosuppression upon transplantation in patients. Neural progenitors derived from patient‐specific induced pluripotent stem cells (iPSCs) may be relevant for autologous ex vivo gene‐therapy applications to treat genetic diseases with unmet medical need. In this scenario, obtaining iPSC‐derived neural stem cells (NSCs) showing a reliable “NSC signature” is mandatory. Here, we generated human iPSC (hiPSC) clones via reprogramming of skin fibroblasts derived from normal donors and patients affected by metachromatic leukodystrophy (MLD), a fatal neurodegenerative lysosomal storage disease caused by genetic defects of the arylsulfatase A (ARSA) enzyme. We differentiated hiPSCs into NSCs (hiPS‐NSCs) sharing molecular, phenotypic, and functional identity with hfNSCs, which we used as a “gold standard” in a side‐by‐side comparison when validating the phenotype of hiPS‐NSCs and predicting their performance after intracerebral transplantation. Using lentiviral vectors, we efficiently transduced MLD hiPSCs, achieving supraphysiological ARSA activity that further increased upon neural differentiation. Intracerebral transplantation of hiPS‐NSCs into neonatal and adult immunodeficient MLD mice stably restored ARSA activity in the whole central nervous system. Importantly, we observed a significant decrease of sulfatide storage when ARSA‐overexpressing cells were used, with a clear advantage in those mice receiving neonatal as compared with adult intervention. Thus, we generated a renewable source of ARSA‐overexpressing iPSC‐derived bona fide hNSCs with improved features compared with clinically approved hfNSCs. Patient‐specific ARSA‐overexpressing hiPS‐NSCs may be used in autologous ex vivo gene therapy protocols to provide long‐lasting enzymatic supply in MLD‐affected brains. Stem Cells Translational Medicine 2017;6:352–368 PMID:28191778

  20. Beverage consumption among European adolescents in the HELENA Study

    PubMed Central

    Duffey, K.J.; Huybrechts, I.; Mouratidou, T.; Libuda, L.; Kersting, M.; DeVriendt, T.; Gottrand, F.; Widhalm, K.; Dallongeville, J.; Hallström, L.; González-Gross, M.; DeHenauw, S.; Moreno, L.A.; Popkin, B.M.

    2012-01-01

    Background and Objective Our objective was to describe the fluid and energy consumption of beverages in a large sample of European adolescents Methods We used data from 2,741 European adolescents residing in 8 countries participating in the Healthy Lifestyle in Europe by Nutrition in Adolescence Cross Sectional Study (HELENA-CSS). We averaged two 24-hour recalls, collected using the HELENA-dietary assessment tool. By gender and age subgroup (12.5–14.9 y and 15–17.5 y), we examined per capita and per consumer fluid (milliliters [mL]) and energy (kilojoules [kJ]) intake from beverages and percent consuming ten different beverage groups. Results Mean beverage consumption was 1611 ml/d in boys and 1316 ml/d in girls. Energy intake from beverages was about 1966 kJ/d and 1289 kJ/d in European boys and girls respectively, with sugar-sweetened beverages (carbonated and non-carbonated beverages, including soft drinks, fruit drinks and powders/concentrates) contributing to daily energy intake more than other groups of beverages. Boys and older adolescents consumed the most amount of per capita total energy from beverages. Among all age and gender subgroups sugar-sweetened beverages, sweetened milk (including chocolate milk and flavored yogurt drinks all with added sugar), low-fat milk, and fruit juice provided the highest amount of per capita energy. Water was consumed by the largest percent of adolescents followed by sugar-sweetened beverages, fruit juice, and sweetened milk. Among consumers, water provided the greatest fluid intake and sweetened milk accounted for the largest amount of energy intake followed by sugar-sweetened beverages. Patterns of energy intake from each beverage varied between countries. Conclusions European adolescents consume an average of 1455 ml/d of beverages, with the largest proportion of consumers and the largest fluid amount coming from water. Beverages provide 1609 kJ/d, of which 30.4%, 20.7%, and 18.1% comes from sugar-sweetened beverages, sweetened milk, and fruit juice respectively. PMID:21952695

  1. PARKA II Experiment Utilizing SEA SPIDER. ONR Scientific Plan 2-69

    DTIC Science & Technology

    1969-06-26

    speed and wave height, and take a bathythermograph record to establish depth of surface layer . Log layer depth only with wind and wave data. Step 12...range acoustic propagation experiments designed to support the advanced development objectives of the Long Range Acoustic Propagation Project (LRAPP...environmental experiments conducted under the Long Range Acoustic Propagation Project (LR PP) for the purpose of, evaluating and improving

  2. Control of depth to permafrost and soil temperature by the forest floor in black spruce/feathermoss communities.

    Treesearch

    C.T. Dyrness

    1982-01-01

    Changes in depth to permafrost and soil temperature were investigated for 4 years after treatment of the forest floor on small plots by fire and mechanical removal of half the forest floor layer and the entire layer. The only treatments to show a consistent, statistically significant effect were the mechanical removals. Fire treatments usually did not have a...

  3. Plant nutrient acquisition strategies in tundra species: at which soil depth do species take up their nitrogen?

    NASA Astrophysics Data System (ADS)

    Limpens, Juul; Heijmans, Monique; Nauta, Ake; van Huissteden, Corine; van Rijssel, Sophie

    2016-04-01

    The Arctic is warming at unprecedented rates. Increased thawing of permafrost releases nutrients locked up in the previously frozen soils layers, which may initiate shifts in vegetation composition. The direction in which the vegetation shifts will co-determine whether Arctic warming is mitigated or accelerated, making understanding successional trajectories urgent. One of the key factors influencing the competitive relationships between plant species is their access to nutrients, in particularly nitrogen (N). We assessed the depth at which plant species took up N by performing a 15N tracer study, injecting 15(NH4)2SO4 at three depths (5, 15, 20 cm) into the soil in arctic tundra in north-eastern Siberia in July. In addition we explored plant nutrient acquisition strategy by analyzing natural abundances of 15N in leaves. We found that vascular plants took up 15N at all injection depths, irrespective of species, but also that species showed a clear preference for specific soil layers that coincided with their functional group (graminoids, dwarf shrubs, cryptogams). Graminoids took up most 15N at 20 cm depth nearest to the thaw front, with grasses showing a more pronounced preference than sedges. Dwarf shrubs took up most 15N at 5 cm depth, with deciduous shrubs displaying more preference than evergreens. Cryptogams did not take up any of the supplied 15N . The natural 15N abundances confirmed the pattern of nutrient acquisition from deeper soil layers in graminoids and from shallow soil layers in both deciduous and evergreen dwarf shrubs. Our results prove that graminoids and shrubs differ in their N uptake strategies, with graminoids profiting from nutrients released at the thaw front, whereas shrubs forage in the upper soil layers. The above implies that graminoids, grasses in particular, will have a competitive advantage over shrubs as the thaw front proceeds and/or superficial soil layers dry out. Our results suggest that the vertical distribution of nutrients over the soil will play an important role in vegetation succession as permafrost thaw progresses.

  4. Nano-size defects in arsenic-implanted HgCdTe films: a HRTEM study

    NASA Astrophysics Data System (ADS)

    Bonchyk, O. Yu.; Savytskyy, H. V.; Swiatek, Z.; Morgiel, Y.; Izhnin, I. I.; Voitsekhovskii, A. V.; Korotaev, A. G.; Mynbaev, K. D.; Fitsych, O. I.; Varavin, V. S.; Dvoretsky, S. A.; Marin, D. V.; Yakushev, M. V.

    2018-02-01

    Radiation damage and its transformation under annealing were studied with bright-field and high-resolution transmission electron microscopy for arsenic-implanted HgCdTe films with graded-gap surface layers. In addition to typical highly defective layers in as-implanted material, a 50 nm-thick sub-surface layer with very low defect density was observed. The main defects in other layers after implantation were dislocation loops, yet after arsenic activation annealing, the dominating defects were single dislocations. Transport (from depth to surface), transformation and annihilation of radiation-induced defects were observed as a result of annealing, with the depth with the maximum defect density decreasing from 110 to 40 nm.

  5. Benefits of adaptive radiation therapy in lung cancer as a function of replanning frequency

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dial, Christian; Weiss, Elisabeth; Hugo, Geoffrey D., E-mail: gdhugo@vcu.edu

    Purpose: To quantify the potential benefit associated with daily replanning in lung cancer in terms of normal tissue dose sparing and to characterize the tradeoff between adaptive benefit and replanning frequency. Methods: A set of synthetic images and contours, derived from weekly active breathing control images of 12 patients who underwent radiation therapy treatment for nonsmall cell lung cancer, is generated for each fraction of treatment using principal component analysis in a way that preserves temporal anatomical trends (e.g., tumor regression). Daily synthetic images and contours are used to simulate four different treatment scenarios: (1) a “no-adapt” scenario that simulatesmore » delivery of an initial plan throughout treatment, (2) a “midadapt” scenario that implements a single replan for fraction 18, (3) a “weekly adapt” scenario that simulates weekly adaptations, and (4) a “full-adapt” scenario that simulates daily replanning. An initial intensity modulated radiation therapy plan is created for each patient and replanning is carried out in an automated fashion by reoptimizing beam apertures and weights. Dose is calculated on each image and accumulated to the first in the series using deformable mappings utilized in synthetic image creation for comparison between simulated treatments. Results: Target coverage was maintained and cord tolerance was not exceeded for any of the adaptive simulations. Average reductions in mean lung dose (MLD) and volume of lung receiving 20 Gy or more (V20{sub lung}) were 65 ± 49 cGy (p = 0.000 01) and 1.1% ± 1.2% (p = 0.0006), respectively, for all patients. The largest reduction in MLD for a single patient was 162 cGy, which allowed an isotoxic escalation of the target dose of 1668 cGy. Average reductions in cord max dose, mean esophageal dose (MED), dose received by 66% of the heart (D66{sub heart}), and dose received by 33% of the heart (D33{sub heart}), were 158 ± 280, 117 ± 121, 37 ± 77, and 99 ± 120 cGy, respectively. Average incremental reductions in MLD for the midadapt, weekly adapt, and full-adapt treatments were 38, 18, and 8 cGy, respectively. Incremental reductions in MED for the same treatments were 57, 37, and 23 cGy. Reductions in MLD and MED for the full-adapt treatment were correlated with the absolute decrease in the planning target volume (r = 0.34 and r = 0.26). Conclusions: Adaptive radiation therapy for lung cancer yields clinically relevant reductions in normal tissue doses for frequencies of adaptation ranging from a single replan up to daily replanning. Increased frequencies of adaptation result in additional benefit while magnitude of benefit decreases.« less

  6. Comprehensive functional analysis of N-linked glycans on Ebola virus GP1.

    PubMed

    Lennemann, Nicholas J; Rhein, Bethany A; Ndungo, Esther; Chandran, Kartik; Qiu, Xiangguo; Maury, Wendy

    2014-01-28

    Ebola virus (EBOV) entry requires the virion surface-associated glycoprotein (GP) that is composed of a trimer of heterodimers (GP1/GP2). The GP1 subunit contains two heavily glycosylated domains, the glycan cap and the mucin-like domain (MLD). The glycan cap contains only N-linked glycans, whereas the MLD contains both N- and O-linked glycans. Site-directed mutagenesis was performed on EBOV GP1 to systematically disrupt N-linked glycan sites to gain an understanding of their role in GP structure and function. All 15 N-glycosylation sites of EBOV GP1 could be removed without compromising the expression of GP. The loss of these 15 glycosylation sites significantly enhanced pseudovirion transduction in Vero cells, which correlated with an increase in protease sensitivity. Interestingly, exposing the receptor-binding domain (RBD) by removing the glycan shield did not allow interaction with the endosomal receptor, NPC1, indicating that the glycan cap/MLD domains mask RBD residues required for binding. The effects of the loss of GP1 N-linked glycans on Ca(2+)-dependent (C-type) lectin (CLEC)-dependent transduction were complex, and the effect was unique for each of the CLECs tested. Surprisingly, EBOV entry into murine peritoneal macrophages was independent of GP1 N-glycans, suggesting that CLEC-GP1 N-glycan interactions are not required for entry into this important primary cell. Finally, the removal of all GP1 N-glycans outside the MLD enhanced antiserum and antibody sensitivity. In total, our results provide evidence that the conserved N-linked glycans on the EBOV GP1 core protect GP from antibody neutralization despite the negative impact the glycans have on viral entry efficiency. Filovirus outbreaks occur sporadically throughout central Africa, causing high fatality rates among the general public and health care workers. These unpredictable hemorrhagic fever outbreaks are caused by multiple species of Ebola viruses, as well as Marburg virus. While filovirus vaccines and therapeutics are being developed, there are no licensed products. The sole viral envelope glycoprotein, which is a principal immunogenic target, contains a heavy shield of glycans surrounding the conserved receptor-binding domain. We find that disruption of this shield through targeted mutagenesis leads to an increase in cell entry, protease sensitivity, and antiserum/antibody sensitivity but is not sufficient to allow virion binding to the intracellular receptor NPC1. Therefore, our studies provide evidence that filoviruses maintain glycoprotein glycosylation to protect against proteases and antibody neutralization at the expense of efficient entry. Our results unveil interesting insights into the unique entry process of filoviruses and potential immune evasion tactics of the virus.

  7. Desert Dust Layers Over Polluted Marine Boundary Layers: ACE-2 Measurements and ACE-Asia Plans

    NASA Technical Reports Server (NTRS)

    Russell, Philip B.; Schmid, B.; Livingston, J. M.; Redemann, J.; Bergstrom, R. W.; Condon, Estelle P. (Technical Monitor)

    2000-01-01

    Aerosols in ACE-Asia are expected to have some commonalties with those in ACE-2, along with important differences. Among the commonalities are occurrences of desert dust layers over polluted marine boundary layers. Differences include the nature of the dust (yellowish in the East Asia desert outflow, vs. reddish-brown in the Sahara Outflow measured in ACE-2) and the composition of boundary-layer aerosols (e.g., more absorbing, soot and organic aerosol in-the Asian plume, caused by coal and biomass burning, with limited controls). In this paper we present ACE-2 measurements and analyses as a guide to our plans for ACE-2 Asia. The measurements include: (1) Vertical profiles of aerosol optical depth and extinction (380-1558 nm), and of water vapor column and concentration, from the surface through the elevated desert dust, measured by the 14-channel Ames Airborne Tracking Sunphotometer (AATS-14); (2) Comparisons of airborne and shipborne sunphotometer optical depths to satellite-retrieved values, with and without desert dust; (3) Comparisons between airborne Sunphotometer optical depth and extinction spectra and those derived from coincident airborne in situ measurements of aerosol size distribution, scattering and absorption; (4) Comparisons between size distributions measured in situ and retrieved from sunphotometer optical depth spectra; (5) Comparisons between aerosol single scattering albedo values obtained by several techniques, using various combinations of measurements of backscatter, extinction, size distribution, scattering, absorption, and radiative flux. We show how analyses of these data can be used to address questions important to ACE-Asia, such as: (1) How do dust and other absorbing aerosols affect the accuracy of satellite optical depth retrievals? How important are asphericity effects? (2) How important are supermicron dust and seasalt aerosols to overall aerosol optical depth and radiative forcing? How well are these aerosols sampled by aircraft inlets and instruments? (3) How consistent are suborbital in situ and remote measurements of aerosols, among themselves and with satellite retrievals? What are the main reasons for observed inconsistencies?

  8. Modeling of the Climax Stock and Related Plutons Based on the Inversion of Magnetic Data, Southwest Nevada

    USGS Publications Warehouse

    Phelps, Geoffrey A.; Jachens, Robert C.; Moring, Barry C.; Roberts, Carter W.

    2004-01-01

    Two models of the Climax and Gold Meadows stocks were generated using a new method of magnetic inversion modeling based on the pseudogravity anomaly. The first model examined the shape of the two stocks and their connection at depth, concluding that the stocks are connected -4000 m below the ground surface. The second model re-examined the shape and depth of the Climax stock using a two-layer model and new magnetic data collected from drill hole ER-8-1. Existing and new magnetic data support a model of a zoned pluton with increasing magnetization with depth. A model of a zoned pluton was generated and adjusted to fit the magnetic anomaly measured over the stock. The model has an upper layer that extends to a depth of 1,700 m and is magnetized at 0.06 A/m, and a lower layer that extends to a maximum depth of 7,600 m and is magnetized at 0.17 A/m. The model matches the outcrop data, but was unable to match the intercept of the Climax stock from drill hole ER-8-1.

  9. Vertical distribution of the sound-scattering layer in the Amundsen Sea, Antarctica

    NASA Astrophysics Data System (ADS)

    Lee, Hyungbeen; La, Hyoung Sul; Kang, Donhyug; Lee, SangHoon

    2018-03-01

    Mid-trophic level at high-latitude coastal water in the Southern Ocean reside unique geographical condition with sea ice, coastal polynya, and ice shelf. To investigate the regional differences in their vertical distribution during summer, we examined acoustic backscatter data from scientific echo sounder, collected in the three representative regions in the Amundsen Sea: pack ice zone, coastal polynya zone, and ice shelf zone. The weighted mean depths (WMDs) representing zooplankton were calculated with the high resolution acoustic backscatter (1-m depth) to identify the vertical variability of the sound-scattering layer (SSL). WMDs were mainly distributed between 50 and 130 m exhibiting clear regional differences. The WMDs were detected in the shallow depth ranged between 48 and 84 m within the pack ice and coastal polynya, whereas they were observed at deeper depths around near ice shelf ranged between 117 and 126 m. WMDs varied with changing the stratification of water column structure representing strong linear relationship with the mixed layer depth (r = 0.69). This finding implies that understanding the essential forcing of zooplankton behavior will improve our ability to assess the coastal ecosystem in the Southern Ocean facing dramatic change.

  10. Structure and physics of solar faculae

    NASA Astrophysics Data System (ADS)

    Pecker, J.-C.; Dumont, S.; Mouradian, Z.

    1992-04-01

    The optical depths of layers in the chromosphere-corona transition (CCT) zone, which is responsible for resolved structures in CII, CIII, OIV, and OVI lines, were determined using a new method that takes into account the effect of roughness (or local departures from sphericity) of the emitting layers in the CCT zone. The method allows determination of the angle alpha typical of the roughness (in case of availability of resolved data) and the two optical depths tau-1 and tau-2. It is shown that, even in unresolved cases, the new method gives a more realistic determination of the optical depths than previously determined.

  11. Vertical spatial sensitivity and exploration depth of low-induction-number electromagnetic-induction instruments

    USGS Publications Warehouse

    Callegary, J.B.; Ferré, T.P.A.; Groom, R.W.

    2007-01-01

    Vertical spatial sensitivity and effective depth of exploration (d e) of low-induction-number (LIN) instruments over a layered soil were evaluated using a complete numerical solution to Maxwell's equations. Previous studies using approximate mathematical solutions predicted a vertical spatial sensitivity for instruments operating under LIN conditions that, for a given transmitter-receiver coil separation (s), coil orientation, and transmitter frequency, should depend solely on depth below the land surface. When not operating under LIN conditions, vertical spatial sensitivity and de also depend on apparent soil electrical conductivity (??a) and therefore the induction number (??). In this new evaluation, we determined the range of ??a and ?? values for which the LIN conditions hold and how de changes when they do not. Two-layer soil models were simulated with both horizontal (HCP) and vertical (VCP) coplanar coil orientations. Soil layers were given electrical conductivity values ranging from 0.1 to 200 mS m-1. As expected, de decreased as ??a increased. Only the least electrically conductive soil produced the de expected when operating under LIN conditions. For the VCP orientation, this was 1.6s, decreasing to 0.8s in the most electrically conductive soil. For the HCP orientation, de decreased from 0.76s to 0.51s. Differences between this and previous studies are attributed to inadequate representation of skin-depth effect and scattering at interfaces between layers. When using LIN instruments to identify depth to water tables, interfaces between soil layers, and variations in salt or moisture content, it is important to consider the dependence of de on ??a. ?? Soil Science Society of America.

  12. A Novel Adjuvant-Solution Layer Strategy for Improving the Efficacy of Cryosurgery.

    PubMed

    Ramajayam, K K; Kumar, A; Sarangi, S K; Thirugnanam, A

    During cryosurgery, studies reported earlier suggest increased destruction inside the tumour due to adjuvants or the prevention of damage to neighbouring healthy tissue through different methods. This study advocates a novel strategy that increases the freezing inside agarose gel phantoms by addition of glycine and limits the freezing to the desired location using a perfluorohexane layer during cryosurgery. Cryosurgery of glycine containing gels is carried out with and without perfluorohexane layer and the thermal history is measured using K-type thermocouples connected to a data acquisition system. The presence of glycine causes increased freezing during cryosurgery with an ice ball depth of 16 mm, while with a perfluorohexane layer at this gel interface, this depth is 13 mm, indicating the ability of this layer to limit freezing. It can be concluded that glycine addition results in substantial temperature decrease and perfluorohexane layer insulates the glycine gel effectively during cryosurgical cooling.

  13. The evaluation of zinc and copper content in tooth enamel without any pathological changes - an in vitro study.

    PubMed

    Klimuszko, Elzbieta; Orywal, Karolina; Sierpinska, Teresa; Sidun, Jarosław; Golebiewska, Maria

    2018-01-01

    The objectives of the study were to evaluate the content of copper and zinc in individual layers of tooth enamel and to analyze the relationships between the study minerals in individual layers of tooth enamel. Fifteen human permanent teeth were cut off every 150 μm alongside the labial surface. Acid biopsy of each layer was performed. The zinc content was determined using the air-acetylene flame method. The copper content was determined using the electrothermal technique with argon. The mean zinc concentrations increased significantly starting from the outer enamel surface, with the maximum concentration in the 150-300 μm layer. The mean copper concentrations increased substantially from the outer enamel surface to a depth of 150 μm, and then a slight downward trend of this mineral levels was seen, down to a depth of 450 μm. Strong positive correlation was found between the zinc and copper concentrations at depths of 150-300, 450-600 and 600-750 μm. The levels of zinc and copper in the outer enamel layers may have an effect on the increased content of unipolar minerals at deeper enamel layers. The content of the study elements determined may reflect the process of mineralization and maturation of enamel in the pre-eruption period.

  14. All-optical intensity modulation based on graphene-coated microfibre waveguides

    NASA Astrophysics Data System (ADS)

    Wang, Ruiduo; Li, Diao; Jiang, Man; Wu, Hao; Xu, Xiang; Ren, Zhaoyu

    2018-03-01

    We investigate graphene-covered microfibre (GCM) waveguides, and analyse the microfibres' evanescent field distributions in different diameters and lengths by numerically simulation. According to the simulation results, we designed a graphene-based all-optical modulator using 980 nm and Amplified Spontaneous Emission (ASE) lasers, employing the microfibre's evanescent field induced light-graphene interaction. We studied the modulation effect that is influenced by the microfibre's diameter, number of graphene layers, and effective graphene length. Compared to a single graphene layer of shorter length, the double graphene layer with longer length presents stronger absorption and higher modulation depth. Using a 2- μm diameter microfibre covered by ∼0.3 cm double graphene sheets, we achieved a modulation depth of 8.45 dB. This modulator features ease of fabrication, low cost, and a controllable modulation depth.

  15. Depth-sensitive optical spectroscopy for layered tissue measurements (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Liu, Wei; Yu, Xiaojun; Liu, Quan; Liu, Linbo; Ong, Yi Hong

    2017-02-01

    Disease diagnosis based on the visual inspection of the pathological presentations or symptoms on the epithelial tissue such as the skin are subjective and highly depend on the experience of the doctors. Vital diagnostic information for the accurate identification of diseases is usually located underneath the surface and its depth distribution is known to be related to disease progression. Although optical spectroscopic measurements are fast and non-invasive, the accurate retrieval of the depth-specific diagnostic information is complicated by the heterogeneous nature of epithelial tissues. The optical signal measured from a tissue is often the result of averaging from a large tissue volume that mixes information from the region of interest and the surrounding tissue region, especially from the overlaying layers. Our group has developed a series of techniques for depth sensitive optical measurements from such layered tissues. We will first review the earlier development of composite fiber-optic probe, in which the source-detector separation and the angles of source and detector fibers are varied to achieve depth sensitive measurements. Then the more recent development of non-contact axicon lens based probes for depth sensitive fluorescence measurements and the corresponding numerical methods for optimization will be introduced. Finally, the most recently developed snapshot axicon lens based probe that can measure Raman spectra from five different depths at the same time will be discussed. Results from tissue phantoms, ex vivo pork samples and in vivo fingernail measurements will be presented, which indicates the great potential of depth sensitive optical spectroscopy for clinical tissue diagnosis.

  16. Evaluation of standard radiation atmosphere aerosol models for a coastal environment

    NASA Technical Reports Server (NTRS)

    Whitlock, C. H.; Suttles, J. T.; Sebacher, D. I.; Fuller, W. H.; Lecroy, S. R.

    1986-01-01

    Calculations are compared with data from an experiment to evaluate the utility of standard radiation atmosphere (SRA) models for defining aerosol properties in atmospheric radiation computations. Initial calculations with only SRA aerosols in a four-layer atmospheric column simulation allowed a sensitivity study and the detection of spectral trends in optical depth, which differed from measurements. Subsequently, a more detailed analysis provided a revision in the stratospheric layer, which brought calculations in line with both optical depth and skylight radiance data. The simulation procedure allows determination of which atmospheric layers influence both downwelling and upwelling radiation spectra.

  17. Interaction between aerosol and the planetary boundary layer depth at sites in the US and China

    NASA Astrophysics Data System (ADS)

    Sawyer, V. R.

    2015-12-01

    The depth of the planetary boundary layer (PBL) defines a changing volume into which pollutants from the surface can disperse, which affects weather, surface air quality and radiative forcing in the lower troposphere. Model simulations have also shown that aerosol within the PBL heats the layer at the expense of the surface, changing the stability profile and therefore also the development of the PBL itself: aerosol radiative forcing within the PBL suppresses surface convection and causes shallower PBLs. However, the effect has been difficult to detect in observations. The most intensive radiosonde measurements have a temporal resolution too coarse to detect the full diurnal variability of the PBL, but remote sensing such as lidar can fill in the gaps. Using a method that combines two common PBL detection algorithms (wavelet covariance and iterative curve-fitting) PBL depth retrievals from micropulse lidar (MPL) at the Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) site are compared to MPL-derived PBL depths from a multiyear lidar deployment at the Hefei Radiation Observatory (HeRO). With aerosol optical depth (AOD) measurements from both sites, it can be shown that a weak inverse relationship exists between AOD and daytime PBL depth. This relationship is stronger at the more polluted HeRO site than at SGP. Figure: Mean daily AOD vs. mean daily PBL depth, with the Nadaraya-Watson estimator overlaid on the kernel density estimate. Left, SGP; right, HeRO.

  18. The Effect of Cognitive- and Metacognitive-Based Instruction on Problem Solving by Elementary Students with Mathematical Learning Difficulties

    ERIC Educational Resources Information Center

    Grizzle-Martin, Tamieka

    2014-01-01

    Children who struggle in mathematics may also lack cognitive awareness in mathematical problem solving. The cognitively-driven program IMPROVE, a multidimensional method for teaching mathematics, has been shown to be helpful for students with mathematical learning difficulties (MLD). Guided by cognitive theory, the purpose of this…

  19. U.S. EPA, Pesticide Product Label, RED TORPEDO USE-AS-IS RAT KILLER, 12/14/1967

    EPA Pesticide Factsheets

    2011-04-21

    ... ".dh('t'p an \\,lill\\(,ITlllJ'tt'd ,1Ippl~ of 11:111 1'11' nl.; at It'.I;t II) Ii:l\\';, fll) mil" ;\\1 it-:l"\\ 1:) '1:1:,', If kli~ I)('crill\\l'-; >(ur. m()ld~' 't!' Ot!kr\\":l'-jlOI;Cd, it .. ...

  20. A Review of Mathematical Learning Disabilities in Children with Fragile X Syndrome

    ERIC Educational Resources Information Center

    Murphy, Melissa M.

    2009-01-01

    The prevalence rate of mathematical learning disabilities (MLD) among children with fragile X syndrome who do not meet criteria for intellectual and developmental disabilities ([approximately equal to] 50% of female children) exceeds the rate reported in the general population. The purpose of this article is two-fold: (1) to review the findings on…

  1. Moderate Learning Difficulties: Searching for Clarity and Understanding

    ERIC Educational Resources Information Center

    Norwich, Brahm; Ylonen, Annamari; Gwernan-Jones, Ruth

    2014-01-01

    The concept of moderate learning difficulties (MLD) is not clearly understood in its definition and in its general use. Nevertheless, as a distinct area of special educational needs (SEN) this category has constituted about a quarter of all of those pupils identified as having SEN in England. This paper reports the analysis of findings from an…

  2. Innovative Leaders Take the Phone and Run: Profiles of Four Trailblazing Programs

    ERIC Educational Resources Information Center

    Norris, Cathleen; Soloway, Elliot; Menchhofer, Kyle; Bauman, Billie Diane; Dickerson, Mindy; Schad, Lenny; Tomko, Sue

    2010-01-01

    While the Internet changed everything, mobile will change everything squared. The Internet is just a roadway, and computers--the equivalent of cars for the Internet--have been expensive. The keepers of the information roadway--the telecommunication companies--will give one a "computer," such as cell phone, mobile learning device, or MLD,…

  3. Mathematical Learning Disability in Girls with Turner Syndrome: A Challenge to Defining MLD and Its Subtypes

    ERIC Educational Resources Information Center

    Mazzocco, Michele M. M.

    2009-01-01

    Turner syndrome is a common disorder with a prevalence of 1:2,500 live female births. Although not associated with mental retardation, there is an increased risk of learning difficulties in this population. In particular, mathematical learning difficulties among girls with Turner syndrome are prevalent, significant, and persistent. As such, the…

  4. Longitudinal Study of Neurodegenerative Disorders

    ClinicalTrials.gov

    2018-01-31

    MLD; Krabbe Disease; ALD; MPS I; MPS II; MPS III; Vanishing White Matter Disease; GM3 Gangliosidosis; PKAN; Tay-Sachs Disease; NP Deficiency; Osteopetrosis; Alpha-Mannosidosis; Sandhoff Disease; Niemann-Pick Diseases; MPS IV; Gaucher Disease; GAN; GM1 Gangliosidoses; Morquio Disease; S-Adenosylhomocysteine Hydrolase Deficiency; Batten Disease; Pelizaeus-Merzbacher Disease; Leukodystrophy; Lysosomal Storage Diseases; Purine Nucleoside Phosphorylase Deficiency; Multiple Sulfatase Deficiency Disease

  5. Phenotyping for the dynamics of field wheat root system architecture

    NASA Astrophysics Data System (ADS)

    Chen, Xinxin; Ding, Qishuo; Błaszkiewicz, Zbigniew; Sun, Jiuai; Sun, Qian; He, Ruiyin; Li, Yinian

    2017-01-01

    We investigated a method to quantify field-state wheat RSA in a phenotyping way, depicting the 3D topology of wheat RSA in 14d periods. The phenotyping procedure, proposed for understanding the spatio-temporal variations of root-soil interaction and the RSA dynamics in the field, is realized with a set of indices of mm scale precision, illustrating the gradients of both wheat root angle and elongation rate along soil depth, as well as the foraging potential along the side directions. The 70d was identified as the shifting point distinguishing the linear root length elongation from power-law development. Root vertical angle in the 40 mm surface soil layer was the largest, but steadily decreased along the soil depth. After 98d, larger root vertical angle appeared in the deep soil layers. PAC revealed a stable root foraging potential in the 0-70d period, which increased rapidly afterwards (70-112d). Root foraging potential, explained by MaxW/MaxD ratio, revealed an enhanced gravitropism in 14d period. No-till post-paddy wheat RLD decreased exponentially in both depth and circular directions, with 90% roots concentrated within the top 20 cm soil layer. RER along soil depth was either positive or negative, depending on specific soil layers and the sampling time.

  6. Installation restoration research program: Assessment of geophysical methods for subsurface geologic mapping, cluster 13, Edgewood Area, Aberdeen Proving Ground, Maryland. Final report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Butler, D.K.; Sharp, M.K.; Sjostrom, K.J.

    1996-10-01

    Seismic refraction, electrical resistivity, and transient electromagnetic surveys were conducted at a portion of Cluster 13, Edgewood Area of Aberdeen Proving Ground, Maryland. Seismic refraction cross sections map the topsoil layer and the water table (saturated zone). The water table elevations from the seismic surveys correlate closely with water table elevations in nearby monitoring wells. Electrical resistivity cross sections reveal a very complicated distribution of sandy and clayey facies in the upper 10 - 15 m of the subsurface. A continuous surficial (topsoil) layer correlates with the surficial layer of the seismic section and nearby boring logs. The complexity andmore » details of the electrical resistivity cross section correlate well with boring and geophysical logs from nearby wells. The transient electromagnetic surveys map the Pleistocene-Cretaceous boundary, the saprolite, and the top of the Precambrian crystalline rocks. Conducting the transient electromagnetic surveys on a grid pattern allows the construction of a three-dimensional representation of subsurface geology (as represented by variations of electrical resistivity). Thickness and depth of the saprolitic layer and depth to top of the Precambrian rocks are consistent with generalized geologic cross sections for the Edgewood Area and depths projected from reported depths at the Aberdeen Proving Ground NW boundary using regional dips.« less

  7. Phenotyping for the dynamics of field wheat root system architecture

    PubMed Central

    Chen, Xinxin; Ding, Qishuo; Błaszkiewicz, Zbigniew; Sun, Jiuai; Sun, Qian; He, Ruiyin; Li, Yinian

    2017-01-01

    We investigated a method to quantify field-state wheat RSA in a phenotyping way, depicting the 3D topology of wheat RSA in 14d periods. The phenotyping procedure, proposed for understanding the spatio-temporal variations of root-soil interaction and the RSA dynamics in the field, is realized with a set of indices of mm scale precision, illustrating the gradients of both wheat root angle and elongation rate along soil depth, as well as the foraging potential along the side directions. The 70d was identified as the shifting point distinguishing the linear root length elongation from power-law development. Root vertical angle in the 40 mm surface soil layer was the largest, but steadily decreased along the soil depth. After 98d, larger root vertical angle appeared in the deep soil layers. PAC revealed a stable root foraging potential in the 0–70d period, which increased rapidly afterwards (70–112d). Root foraging potential, explained by MaxW/MaxD ratio, revealed an enhanced gravitropism in 14d period. No-till post-paddy wheat RLD decreased exponentially in both depth and circular directions, with 90% roots concentrated within the top 20 cm soil layer. RER along soil depth was either positive or negative, depending on specific soil layers and the sampling time. PMID:28079107

  8. Method for estimating optimal spectral and energy parameters of laser irradiation in photodynamic therapy of biological tissue

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lisenko, S A; Kugeiko, M M

    We have solved the problem of layer-by-layer laser-light dosimetry in biological tissues and of selecting an individual therapeutic dose in laser therapy. A method is proposed for real-time monitoring of the radiation density in tissue layers in vivo, concentrations of its endogenous (natural) and exogenous (specially administered) chromophores, as well as in-depth distributions of the spectrum of light action on these chromophores. As the background information use is made of the spectrum of diffuse light reflected from a patient's tissue, measured by a fibre-optic spectrophotometer. The measured spectrum is quantitatively analysed by the method of approximating functions for fluxes ofmore » light multiply scattered in tissue and by a semi-analytical method for calculating the in-depth distribution of the light flux in a multi-layered medium. We have shown the possibility of employing the developed method for monitoring photosensitizer and oxyhaemoglobin concentrations in tissue, light power absorbed by chromophores in tissue layers at different depths and laser-induced changes in the tissue morphology (vascular volume content and ratios of various forms of haemoglobin) during photodynamic therapy. (biophotonics)« less

  9. SIMS depth profiling of rubber-tyre cord bonding layers prepared using 64Zn depleted ZnO

    NASA Astrophysics Data System (ADS)

    Fulton, W. S.; Sykes, D. E.; Smith, G. C.

    2006-07-01

    Zinc oxide and copper/zinc sulphide layers are formed during vulcanisation and moulding of rubber to brass-coated steel tyre reinforcing cords. Previous studies have described how zinc diffuses through the rubber-brass interface to form zinc sulphide, and combines with oxygen to create zinc oxide during dezincification. The zinc is usually assumed to originate in the brass of the tyre cord, however, zinc oxide is also present in the rubber formulation. We reveal how zinc from these sources is distributed within the interfacial bonding layers, before and after heat and humidity ageing. Zinc oxide produced using 64Zn-isotope depleted zinc was mixed in the rubber formulation in place of the natural ZnO and the zinc isotope ratios within the interfacial layers were followed by secondary ion mass spectroscopy (SIMS) depth profiling. Variations in the relative ratios of the zinc isotopes during depth profiling were measured for unaged, heat-aged and humidity-aged wire samples and in each case a relatively large proportion of the zinc incorporated into the interfacial layer as zinc sulphide was shown to have originated from ZnO in the rubber compound.

  10. Dark gray soils on two-layered deposits in the north of Tambov Plain: Agroecology, properties, and diagnostics

    NASA Astrophysics Data System (ADS)

    Zaidelman, F. R.; Nikiforova, A. S.; Stepantsova, L. V.; Volokhina, V. P.

    2012-05-01

    Dark gray soils in the Tambov Plain are developed from the light-textured glaciofluvial deposits underlain by the calcareous loam. Their morphology, water regime, and productivity are determined by the depth of the slightly permeable calcareous loamy layer, relief, and the degree of gleyzation. The light texture of the upper layer is responsible for its weak structure, high density, the low content of productive moisture, and the low water-holding capacity. If the calcareous loam is at a depth of 100-130 cm, dark gray soils are formed; if it lies at a depth of 40-70 cm, temporary perched water appears in the profile, and dark gray contact-gleyed soils are formed. Their characteristic pedofeatures are skeletans in the upper layers, calcareous nodules in the loamy clay layer, and iron nodules in the podzolized humus and podzolic horizons. The appearance of Fe-Mn concretions is related to gleyzation. The high yield of winter cereals is shown to be produced on the dark gray soils; the yields of spring crops are less stable. Spring cereals should not be grown on the contact-gleyed dark gray soils.

  11. Depth Measurements Using Alpha Particles and Upsettable SRAMs

    NASA Technical Reports Server (NTRS)

    Buehler, M. G.; Reier, M.; Soli, G. A.

    1995-01-01

    A custom designed SRAM was used to measure the thickness of integrated circuit over layers and the epi-layer thickness using alpha particles and a test SRAM. The over layer consists of oxide, nitride, metal, and junction regions.

  12. Is Ceres' deep interior ice-rich? Constraints from crater morphology

    NASA Astrophysics Data System (ADS)

    Bland, M. T.; Raymond, C. A.; Fu, R.; Marchi, S.; Castillo, J. C.; King, S. D.; Schenk, P.; Preusker, F.; Park, R. S.; Russell, C. T.

    2016-12-01

    Determining the composition and internal structure of Ceres is critical to understanding its origin and evolution. Analysis of the depths of Ceres' largest impact craters [Bland et al. 2016] and global shape [Fu et al. 2016] using data returned by NASA's Dawn spacecraft indicate that the dwarf planet's subsurface contains no more than 30% water ice by volume, with the other 70% consisting of salts (hydrated and/or anhydrous), clathrates, and phyllosilicates. Despite these findings, Ceres is unlikely to be ice-free. The GRaND instrument has detected probable water ice at decimeter depths (with strong latitudinal variations) [Prettyman et al. 2016], water ice has been detected in fresh [Combe et al. 2016] and permanently shadowed craters [Schorghofer et al. 2016], and the simple-complex morphologic transition diameter is consistent with a weak (icy) surface layer [Schenk et al. 2016]. Furthermore, a cryovolcanic origin for Ahuna Mons requires a source of water-rich material [Ruesch et al. 2016]. Here we use numerical simulations of the viscous relaxation of impact craters to provide new constraints on the water ice content of Ceres as a function of depth that enable a more complete understanding of the thickness and composition of its outer layer. These new simulations include three rheological layers: a high-viscosity near-surface layer, a weaker (possibly ice-rich layer), and an essentially immobile rocky layer at depth. Results are latitude (temperature) dependent; however, we generally find that retaining crater topography requires a high-viscosity (ice-poor) layer with a thickness of 50% the crater radius. For example, retaining a 100-km diameter crater at latitudes below 50o requires a high-viscosity (103x water ice) layer at least 30 km thick, if the underlying layer is pure ice. Deep, low-latitude craters 150 km in diameter are observed on Ceres [Bland et al. 2016], so the high-viscosity layer is likely >40 km thick. However, our results do not exclude the existence of a reservoir enriched in water ice at the base of Ceres' outer layer. We also find that the unique morphology of Ceres' largest crater, Kerwan, may result from viscous relaxation in a thin outer layer, potentially providing a constraint on the local thickness of Ceres outer shell.

  13. Habitat Parameters for Oxygen Minimum Zone Copepods from the Eastern Tropical North Pacific

    NASA Astrophysics Data System (ADS)

    Wishner, K. F.; Outram, D.; Grassian, B.

    2016-02-01

    Oxygen minimum zones (OMZs) affect zooplankton distributions and may be expanding in worldwide spatial and vertical extent from climate change. We studied zooplankton (especially copepod) distributions in the Eastern Tropical North Pacific (ETNP) OMZ, using day-night vertically-stratified MOCNESS tows (0-1000m). Habitat parameters (temperature, oxygen, depth) were defined for abundant copepod species and groups. Zooplankton layers, with a unique suite of species, occurred at upper and lower OMZ oxyclines. At the mesopelagic lower oxycline, there was a layer with a characteristic species assemblage and a sharp 10X biomass increase compared to nearby depths. The lower oxycline layer occurred within a narrow very low oxygen concentration (2µM). At two stations with different OMZ vertical extents, the lower oxycline layer depth changed with OMZ thickness, remaining at the same oxygen concentration but different temperature. Life history habitat (diapause depth, temperature) of the copepod Eucalanus inermis was also affected. In the upper water column at the two stations, large diel vertical migrators (fish, euphausiids) descended to taxon-specific daytime depths in the mid OMZ, regardless of oxygen level, but copepod species distributions showed more variability and sensitivity to habitat parameters. We predict that, with moderate OMZ expansion, the lower oxycline community will likely shift depth, thus re-distributing midwater biomass, species, and processes. In the upper water column, large vertical migrator distributions may be less affected, while smaller taxa (copepods) will likely be sensitive to habitat changes. At some point, the ability to withstand these changes may be exceeded for particular taxa, with consequences for assemblages, trophic webs, and export. In keeping with the session theme, we hope to compare our oceanic findings with others' results from coastal hypoxic situations.

  14. Concentration and spatial distribution of lead in soil used for ammunition destruction.

    PubMed

    do Nascimento Guedes, Jair; do Amaral Sobrinho, Nelson Moura Brasil; Ceddia, Marcos Bacis; Vilella, André Luis Oliveira; Tolón-Becerra, Alfredo; Lastra-Bravo, Xavier Bolívar

    2012-10-01

    Studies on heavy metal contamination in soils used for ammunition disposal and destruction are still emerging. The present study aimed to evaluate the contamination level and spatial distribution of lead in disposal and destruction areas. This site was used for ammunition disposal and destruction activities for 20 years. The ammunition destruction site (1,296 ha), a sampling system that followed a sampling grid (5 m × 5 m) with 30 points was adopted and samples were collected at the following five depths with a total of 150 samples. During the collection procedure, each sampling grid point was georeferenced using a topographic global positioning system. Data were validated through semivariogram and kriging models using Geostat software. The results demonstrated that the average lead value was 163 mg kg(-1), which was close to the investigation limit and the contamination levels were higher downstream than upstream. The results showed that there was lead contamination at the destruction site and that the contamination existed mainly at the surface layer depth. However, high lead concentrations were also found at deeper soil depths in the destruction area due to frequent detonations. According to the planimetry data, the areas that require intervention significantly decreased with increasing depths in the following order: 582.7 m(2) in the 0-20 cm layer; 194.6 m(2) in the 20-40 cm layer; 101.6 m(2) in the 40-60 cm layer; and 45.3 m(2) in the 60-80 cm layer.

  15. Long-term decrease in phosphate concentrations in the surface layer of the southern Japan Sea

    NASA Astrophysics Data System (ADS)

    Kodama, Taketoshi; Igeta, Yosuke; Kuga, Mizuki; Abe, Shoko

    2016-10-01

    To identify possible causes for the long-term trends in nutrient concentrations in the southern Japan Sea (JS), we studied nutrient concentrations that were obtained by the Japan Meteorological Agency. Our evaluation shows that phosphate concentrations declined in the surface layers in summer (0-20 and 21-50 m depth) and winter (0-20, 21-50, and 51-100 m depth) over the last 40 years, while no significant linear trend was observed for nitrate concentrations. The declining trend in the phosphate concentration was quantified as 1.8-3.3 nM yr-1. The increase in atmospheric nutrient deposition to the JS could not explain the decline in phosphate concentration. In addition, the mixed-layer depth during winter did not demonstrate any significant trend, and an increase in phosphate concentrations was not observed in any layers; therefore, the decrease in nutrient supply from deep JS water was not considered a major possible cause for the decline in the phosphate concentration. In contrast, the phosphate concentration in the surface of the southern JS during winter showed a significant positive correlation with the concentration in the 21-50 m depth layer of the saline East China Sea (ECS) water in the preceding summer, and the surface water of the southern JS was almost entirely replaced by water originating from the ECS during May-October. Therefore, it is concluded that the declining trend in the phosphate concentrations in the southern JS is caused by horizontal advection of ECS water.

  16. Two receptor tyrosine phosphatases dictate the depth of axonal stabilizing layer in the visual system

    PubMed Central

    Takechi, Hiroki; Kawamura, Hinata

    2017-01-01

    Formation of a functional neuronal network requires not only precise target recognition, but also stabilization of axonal contacts within their appropriate synaptic layers. Little is known about the molecular mechanisms underlying the stabilization of axonal connections after reaching their specifically targeted layers. Here, we show that two receptor protein tyrosine phosphatases (RPTPs), LAR and Ptp69D, act redundantly in photoreceptor afferents to stabilize axonal connections to the specific layers of the Drosophila visual system. Surprisingly, by combining loss-of-function and genetic rescue experiments, we found that the depth of the final layer of stable termination relied primarily on the cumulative amount of LAR and Ptp69D cytoplasmic activity, while specific features of their ectodomains contribute to the choice between two synaptic layers, M3 and M6, in the medulla. These data demonstrate how the combination of overlapping downstream but diversified upstream properties of two RPTPs can shape layer-specific wiring. PMID:29116043

  17. Using Vertical electrical sounding survey and refraction seismic survey for determining the geological layers depths, the structural features and assessment groundwater in Aqaba area in South Jordan.

    NASA Astrophysics Data System (ADS)

    Akawwi, Emad; Alzoubi, Abdallah; Ben Abraham, Zvi; Rahamn Abo Alades, Abdel; Alrzouq, Rami; Tiber, Gidon; Neimi, Tina

    2010-05-01

    The study area is the Aqaba region (Southern wadi Araba basin). Aqaba region area located at 87900 and 89000 North and 147000 and 158000 East (Palestine grid). Tectonically Aqaba area lies within the tectonic plate boundary along the Arabian and African plate slide. This plate boundary comprises numerous and shot fault segments. The main aims of this study are to assessing the groundwater potential and its quality, to explain the subsurface geological conditions and support the ongoing geological, environmental and hydrogeological studies. Therefore, it was anticipated that the results of the geophysical surveying will give many different important parameters as The subsurface geological features, thicknesses of the different lithological units, depth to the bed rocks and depth to the water table. The groundwater can apply an important role in ensuring sustainable water supply in the area. This study was carried out in order to assess groundwater condition, geological layers thicknesses and structural features in Aqaba area by using vertical electrical sounding (VES) surveys and refraction seismic techniques. There are three geoelectrical cross section were carried out at different sites by using the Schlumberger array. The first cross section indicated three layers of different resistivity. The second cross section indicated four layers of different resistivity. The third geoelectrical cross sections indicated three layers. The refraction seismic method also has been conducted in the same area as VES. About 12 refraction seismic profiles have been carried out in the study area. The length of the first profile was 745 m at the direction N-S. This profile indicated two different layers with a different velocities. The length of the second profile was 1320 m with E-W direction. This profile indicated two different layers. The length of the third profile was about 515 m with a direction SE-NW. It recognized two different layers with a different velocities. The fourth profile was N-S direction and the length of this profile was 950 m. Two different layers were recognized along this profile. The fifth profile was located N-S with length about 340 m. Two layers were recognized from this profile. The sixth profile was located N-S direction and the length about 575 m. Three layers were recognized from this profile. The direction of the seventh profile was N-S with a length of about 235 m. two different layers were recognized the top layer was unconsolidated alluvium. The profile number 8 was located N-S with length about 232 m. two layers were conducted from this profile. The direction of ninth profile was NW-SE with length about 565 m. two layers were conducted along this profile. The length of the tenth profile was 235 m and the direction was N-S. Two layers with a different velocities were detected along this profile. Profile number eleven was located SW-NE with length about 475 m. two layers were recognized from this profile. The length of the last profile was 375 m with direction SE-NW. Two layers were conducted from this profile. It was found that the shallow aquifers exist at a depths ranging from 4 to 19 m and the relatively deep aquifers from 24 to 60 m below the ground surface. Keywords: Vertical electrical sounding, Aqaba, Resistivity, Groundwater, Layer depth, Geoelectrical.

  18. Interfacial mixing in as-deposited Si/Ni/Si layers analyzed by x-ray and polarized neutron reflectometry

    NASA Astrophysics Data System (ADS)

    Bhattacharya, Debarati; Basu, Saibal; Singh, Surendra; Roy, Sumalay; Dev, Bhupendra Nath

    2012-12-01

    Interdiffusion occurring across the interfaces in a Si/Ni/Si layered system during deposition at room temperature was probed using x-ray reflectivity (XRR) and polarized neutron reflectivity (PNR). Exploiting the complementarity of these techniques, both structural and magnetic characterization with nanometer depth resolution could be achieved. Suitable model fitting of the reflectivity profiles identified the formation of Ni-Si mixed alloy layers at the Si/Ni and Ni/Si interfaces. The physical parameters of the layered structure, including quantitative assessment of the stoichiometry of interfacial alloys, were obtained from the analyses of XRR and PNR patterns. In addition, PNR provided magnetic moment density profile as a function of depth in the stratified medium.

  19. Fire debris analysis for forensic fire investigation using laser induced breakdown spectroscopy (LIBS)

    NASA Astrophysics Data System (ADS)

    Choi, Soojin; Yoh, Jack J.

    2017-08-01

    The possibility verification of the first attempt to apply LIBS to arson investigation was performed. LIBS has capabilities for real time in-situ analysis and depth profiling. It can provide valuable information about the fire debris that are complementary to the classification of original sample components and combustion residues. In this study, fire debris was analyzed to determine the ignition source and existence of a fire accelerant using LIBS spectra and depth profiling analysis. Fire debris chemical composition and carbon layer thickness determines the possible ignition source while the carbon layer thickness of combusted samples represents the degree of sample carbonization. When a sample is combusted with fire accelerants, a thicker carbon layer is formed because the burning rate is increased. Therefore, depth profiling can confirm the existence of combustion accelerants, which is evidence of arson. Also investigation of fire debris by depth profiling is still possible when a fire is extinguished with water from fire hose. Such data analysis and in-situ detection of forensic signals via the LIBS may assist fire investigation at crime scenes.

  20. Measurement of the vacuum-ultraviolet absorption spectrum of low-k dielectrics using X-ray reflectivity

    NASA Astrophysics Data System (ADS)

    Choudhury, F. A.; Nguyen, H. M.; King, S. W.; Lee, C. H.; Lin, Y. H.; Fung, H. S.; Chen, C. C.; Li, W.; Benjamin, D.; Blatz, J. M.; Nishi, Y.; Shohet, J. L.

    2018-02-01

    During plasma processing, low-k dielectrics are exposed to high levels of vacuum ultraviolet (VUV) radiation that can cause severe damage to dielectric materials. The degree and nature of VUV-induced damage depend on the VUV photon energies and fluence. In this work, we examine the VUV-absorption spectrum of low-k organosilicate glass using specular X-ray reflectivity (XRR). Low-k SiCOH films were exposed to synchrotron VUV radiation with energies ranging from 7 to 21 eV, and the density vs. depth profile of the VUV-irradiated films was extracted from fitting the XRR experimental data. The results show that the depth of the VUV-induced damage layer is a function of the photon energy. Between 7 and 11 eV, the depth of the damaged layer decreases sharply from 110 nm to 60 nm and then gradually increases to 85 nm at 21 eV. The maximum VUV absorption in low-k films occurs between 11 and 15 eV. The depth of the damaged layer was found to increase with film porosity.

  1. Seismic evidence for an extensive gas-bearing layer at shallow depth, offshore from Prudhoe Bay, Alaska

    USGS Publications Warehouse

    Boucher, G.; Reimnitz, E.; Kempema, E.

    1981-01-01

    High-resolution seismic reflection data, recorded offshore from Prudhoe Bay, Alaska, were processed digitally to determine the reflectivity structure of the uppermost layers of the seafloor. A prominent reflector, found at 27 m below the mud line (water depths 7-9 m), has a negative reflection coefficient greater than 0.5. The large acoustic impedance contrast, coupled with a report of gas encountered at a corresponding depth in a nearby drillhole, shows that the reflector is the upper boundary of a zone containing gas. The gas exists in sandy gravel capped by stiff, silty clay. Analysis of unprocessed conventional high-resolution records from the region indicates that the gas-bearing layer may extend over an area of at least 50 km2 at a depth of 20-35 m below the mud line. Similar-appearing reflectors (Reimnitz, 1972), previously unexplained, occur in patches over wide regions of the shelf where offshore oil development is beginning at a rapid pace. This suggests the exercise of caution with respect to possible hazards from shallow gas pockets.

  2. NanoSIMS Imaging Alternation Layers of a Leached SON68 Glass Via A FIB-made Wedged Crater

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Yi-Chung; Schreiber, Daniel K.; Neeway, James J.

    2014-11-01

    Currently, nuclear wastes are commonly immobilized into glasses because of their long-term durability. Exposure to water for long periods of time, however, will eventually corrode the waste form and is the leading potential avenue for radionuclide release into the environment. Because such slow processes cannot be experimentally tested, the prediction of release requires a thorough understanding the mechanisms governing glass corrosion. In addition, due to the exceptional durability of glass, much of the testing must be performed on high-surface-area powders. A technique that can provide accurate compositional profiles with very precise depth resolution for non-flat samples would be a majormore » benefit to the field. Time-of-flight secondary ion mass spectrometry (ToF-SIMS) depth profiling is an excellent tool that has long been used to examine corrosion layers of glass. The roughness of the buried corrosion layers, however, causes the corresponding SIMS depth profiles to exhibit erroneously wide interfaces. In this study, NanoSIMS was used to image the cross-section of the corrosion layers of a leached SON68 glass sample. A wedged crater was prepared by a focused ion beam (FIB) instrument to obtain a 5× improvement in depth resolution for NanoSIMS measurements. This increase in resolution allowed us to confirm that the breakdown of the silica glass network is further from the pristine glass than a second dissolution front for boron, another glass former. The existence of these two distinct interfaces, separated by only ~20 nm distance in depth, was not apparent by traditional ToF-SIMS depth profiling but has been confirmed also by atom probe tomography. This novel sample geometry will be a major benefit to efficient NanoSIMS sampling of irregular interfaces at the nanometer scale that would otherwise be obscured within ToF-SIMS depth profiles.« less

  3. Minimization of the Total Depth of Internal Saw-Tooth Reliefs of a Two-Layer Relief-Phase Diffraction Microstructure

    NASA Astrophysics Data System (ADS)

    Greisukh, G. I.; Danilov, V. A.; Stepanov, S. A.; Antonov, A. I.; Usievich, B. A.

    2018-01-01

    Results of studying the possibility to decrease the total depth of reliefs of a two-layer microstructure having two internal saw-tooth microreliefs reducing the dependence of the diffraction efficiency of the microstructure on the radiation wavelength and angle of radiation incidence on the microstructure are presented. These results allow one to minimize the complexity of obtaining optimum microrelief depths depending on requirements applicable to the diffraction optical element in the framework of the electromagnetic-diffraction theory. Optimum depths provide in the specified spectral range and interval of angles of radiation incidence the maximum possible (for the chosen width of the narrowest zone of the saw-tooth microrelief) value of the diffraction efficiency at the point of its minimum.

  4. Alaska North Slope Tundra Travel Model and Validation Study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Harry R. Bader; Jacynthe Guimond

    2006-03-01

    The Alaska Department of Natural Resources (DNR), Division of Mining, Land, and Water manages cross-country travel, typically associated with hydrocarbon exploration and development, on Alaska's arctic North Slope. This project is intended to provide natural resource managers with objective, quantitative data to assist decision making regarding opening of the tundra to cross-country travel. DNR designed standardized, controlled field trials, with baseline data, to investigate the relationships present between winter exploration vehicle treatments and the independent variables of ground hardness, snow depth, and snow slab thickness, as they relate to the dependent variables of active layer depth, soil moisture, and photosyntheticallymore » active radiation (a proxy for plant disturbance). Changes in the dependent variables were used as indicators of tundra disturbance. Two main tundra community types were studied: Coastal Plain (wet graminoid/moist sedge shrub) and Foothills (tussock). DNR constructed four models to address physical soil properties: two models for each main community type, one predicting change in depth of active layer and a second predicting change in soil moisture. DNR also investigated the limited potential management utility in using soil temperature, the amount of photosynthetically active radiation (PAR) absorbed by plants, and changes in microphotography as tools for the identification of disturbance in the field. DNR operated under the assumption that changes in the abiotic factors of active layer depth and soil moisture drive alteration in tundra vegetation structure and composition. Statistically significant differences in depth of active layer, soil moisture at a 15 cm depth, soil temperature at a 15 cm depth, and the absorption of photosynthetically active radiation were found among treatment cells and among treatment types. The models were unable to thoroughly investigate the interacting role between snow depth and disturbance due to a lack of variability in snow depth cover throughout the period of field experimentation. The amount of change in disturbance indicators was greater in the tundra communities of the Foothills than in those of the Coastal Plain. However the overall level of change in both community types was less than expected. In Coastal Plain communities, ground hardness and snow slab thickness were found to play an important role in change in active layer depth and soil moisture as a result of treatment. In the Foothills communities, snow cover had the most influence on active layer depth and soil moisture as a result of treatment. Once certain minimum thresholds for ground hardness, snow slab thickness, and snow depth were attained, it appeared that little or no additive effect was realized regarding increased resistance to disturbance in the tundra communities studied. DNR used the results of this modeling project to set a standard for maximum permissible disturbance of cross-country tundra travel, with the threshold set below the widely accepted standard of Low Disturbance levels (as determined by the U.S. Fish and Wildlife Service). DNR followed the modeling project with a validation study, which seemed to support the field trial conclusions and indicated that the standard set for maximum permissible disturbance exhibits a conservative bias in favor of environmental protection. Finally DNR established a quick and efficient tool for visual estimations of disturbance to determine when investment in field measurements is warranted. This Visual Assessment System (VAS) seemed to support the plot disturbance measurements taking during the modeling and validation phases of this project.« less

  5. Seismic imaging of slab metamorphism and genesis of intermediate-depth intraslab earthquakes

    NASA Astrophysics Data System (ADS)

    Hasegawa, Akira; Nakajima, Junichi

    2017-12-01

    We review studies of intermediate-depth seismicity and seismic imaging of the interior of subducting slabs in relation to slab metamorphism and their implications for the genesis of intermediate-depth earthquakes. Intermediate-depth events form a double seismic zone in the depth range of c. 40-180 km, which occur only at locations where hydrous minerals are present, and are particularly concentrated along dehydration reaction boundaries. Recent studies have revealed detailed spatial distributions of these events and a close relationship with slab metamorphism. Pressure-temperature paths of the crust for cold slabs encounter facies boundaries with large H2O production rates and positive total volume change, which are expected to cause highly active seismicity near the facies boundaries. A belt of upper-plane seismicity in the crust nearly parallel to 80-90 km depth contours of the slab surface has been detected in the cold Pacific slab beneath eastern Japan, and is probably caused by slab crust dehydration with a large H2O production rate. A seismic low-velocity layer in the slab crust persists down to the depth of this upper-plane seismic belt, which provides evidence for phase transformation of dehydration at this depth. Similar low-velocity subducting crust closely related with intraslab seismicity has been detected in several other subduction zones. Seismic tomography studies in NE Japan and northern Chile also revealed the presence of a P-wave low-velocity layer along the lower plane of a double seismic zone. However, in contrast to predictions based on the serpentinized mantle, S-wave velocity along this layer is not low. Seismic anisotropy and pore aspect ratio may play a role in generating this unique structure. Although further validation is required, observations of these distinct low P-wave velocities along the lower seismic plane suggest the presence of hydrated rocks or fluids within that layer. These observations support the hypothesis that dehydration-derived H2O causes intermediate-depth intraslab earthquakes. However, it is possible that dual mechanisms generate these earthquakes; the initiation of earthquake rupture may be caused by local excess pore pressure from H2O, and subsequent ruptures may propagate through thermal shear instability. In either case, slab-derived H2O plays an important role in generating intermediate-depth events.

  6. Thermophysical properties of lunar media. II - Heat transfer within the lunar surface layer

    NASA Technical Reports Server (NTRS)

    Cremers, C. J.

    1974-01-01

    Heat transfer within the lunar surface layer depends on several thermophysical properties of the lunar regolith, including the thermal conductivity, the specific heat, the thermal diffusivity, and the thermal parameter. Results of property measurements on simulated lunar materials are presented where appropriate as well as measurements made on the actual samples themselves. The variation of temperature on the moon with depth is considered, taking into account various times of the lunar day. The daily variation in temperature drops to about 1 deg at a depth of only 0.172 meters. The steady temperature on the moon below this depth is 225 K.

  7. Dynamic topography and gravity anomalies for fluid layers whose viscosity varies exponentially with depth

    NASA Technical Reports Server (NTRS)

    Revenaugh, Justin; Parsons, Barry

    1987-01-01

    Adopting the formalism of Parsons and Daly (1983), analytical integral equations (Green's function integrals) are derived which relate gravity anomalies and dynamic boundary topography with temperature as a function of wavenumber for a fluid layer whose viscosity varies exponentially with depth. In the earth, such a viscosity profile may be found in the asthenosphere, where the large thermal gradient leads to exponential decrease of viscosity with depth, the effects of a pressure increase being small in comparison. It is shown that, when viscosity varies rapidly, topography kernels for both the surface and bottom boundaries (and hence the gravity kernel) are strongly affected at all wavelengths.

  8. Depth profiling the solid electrolyte interphase on lithium titanate (Li4Ti5O12) using synchrotron-based photoelectron spectroscopy

    NASA Astrophysics Data System (ADS)

    Nordh, Tim; Younesi, Reza; Brandell, Daniel; Edström, Kristina

    2015-10-01

    The presence of a surface layer on lithium titanate (Li4Ti5O12, LTO) anodes, which has been a topic of debate in scientific literature, is here investigated with tunable high surface sensitive synchrotron-based photoelectron spectroscopy (PES) to obtain a reliable depth profile of the interphase. Li||LTO cells with electrolytes consisting of 1 M lithium hexafluorophosphate dissolved in ethylene carbonate:diethyl carbonate (LiPF6 in EC:DEC) were cycled in two different voltage windows of 1.0-2.0 V and 1.4-2.0 V. LTO electrodes were characterized after 5 and 100 cycles. Also the pristine electrode as such, and an electrode soaked in the electrolyte were analyzed by varying the photon energies enabling depth profiling of the outermost surface layer. The main components of the surface layer were found to be ethers, P-O containing compounds, and lithium fluoride.

  9. Nondestructive depth profile of the chemical state of ultrathin Al2O3/Si interface

    NASA Astrophysics Data System (ADS)

    Lee, Jong Cheol; Oh, S.-J.

    2004-05-01

    We investigated a depth profile of the chemical states of an Al2O3/Si interface using nondestructive photon energy-dependent high-resolution x-ray photoelectron spectroscopy (HRXPS). The Si 2p binding energy, attributed to the oxide interfacial layer (OIL), was found to shift from 102.1 eV to 102.9 eV as the OIL region closer to Al2O3 layer was sampled, while the Al 2p binding energy remains the same. This fact strongly suggests that the chemical state of the interfacial layer is not Al silicate as previously believed. We instead propose from the HRXPS of Al 2p and Si 2p depth-profile studies that the chemical states of the Al2O3/Si interface mainly consist of SiO2 and Si2O3.

  10. Measured Two-Dimensional Ice-Wedge Polygon Thermal and Active Layer Dynamics

    NASA Astrophysics Data System (ADS)

    Cable, W.; Romanovsky, V. E.; Busey, R.

    2016-12-01

    Ice-wedge polygons are perhaps the most dominant permafrost related features in the arctic landscape. The microtopography of these features, that includes rims, troughs, and high and low polygon centers, alters the local hydrology. During winter, wind redistribution of snow leads to an increased snowpack depth in the low areas, while the slightly higher areas often have very thin snow cover, leading to differences across the landscape in vegetation communities and soil moisture between higher and lower areas. To investigate the effect of microtopographic caused variation in surface conditions on the ground thermal regime, we established temperature transects, composed of five vertical array thermistor probes (VATP), across four different development stages of ice-wedge polygons near Barrow, Alaska. Each VATP had 16 thermistors from the surface to a depth of 1.5 m, for a total of 80 temperature measurements per polygon. We found snow cover, timing and depth, and active layer soil moisture to be major controlling factors in the observed thermal regimes. In troughs and in the centers of low-centered polygons, the combined effect of typically saturated soils and increased snow accumulation resulted in the highest mean annual ground temperatures (MAGT) and latest freezeback dates. While the centers of high-centered polygons, with thinner snow cover and a dryer active layer, had the lowest MAGT, earliest freezeback dates, and shallowest active layer. Refreezing of the active layer initiated at nearly the same time for all locations and polygons however, we found large differences in the proportion of downward versus upward freezing and the length of time required to complete the refreezing process between polygon types and locations. Using our four polygon stages as a space for time substitution, we conclude that ice-wedge degradation resulting in surface subsidence and trough deepening can lead to overall drying of the active layer and increased skewedness of snow distribution. Which in turn leads to shallower active layers, earlier freezeback dates, and lower MAGT. We also find that the large variation in active layer dynamics (active layer depth, downward vs upward freezing, and freezeback date) are important considerations to understanding and scaling biological processes occurring in these landscapes.

  11. Internal Electrostatic Discharge Monitor - IESDM

    NASA Technical Reports Server (NTRS)

    Kim, Wousik; Goebel, Dan M.; Jun, Insoo; Garrett, Henry B.

    2011-01-01

    A document discusses an innovation designed to effectively monitor dielectric charging in spacecraft components to measure the potential for discharge in order to prevent damage from internal electrostatic discharge (IESD). High-energy electrons penetrate the structural materials and shielding of a spacecraft and then stop inside dielectrics and keep accumulating. Those deposited charges generate an electric field. If the electric field becomes higher than the breakdown threshold (approx. =2 x 10(exp 5) V/cm), discharge occurs. This monitor measures potentials as a function of dielectric depth. Differentiation of potential with respect to the depth yields electric field. Direct measurement of the depth profile of the potential in a dielectric makes real-time electronic field evaluation possible without simulations. The IESDM has been designed to emulate a multi-layer circuit board, to insert very thin metallic layers between the dielectric layers. The conductors serve as diagnostic monitoring locations to measure the deposited electron-charge and the charge dynamics. Measurement of the time-dependent potential of the metal layers provides information on the amount of charge deposited in the dielectrics and the movement of that charge with time (dynamics).

  12. Orbital SAR and Ground-Penetrating Radar for Mars: Complementary Tools in the Search for Water

    NASA Technical Reports Server (NTRS)

    Campbell, B. A.; Grant, J. A.

    2000-01-01

    The physical structure and compositional variability of the upper martian crust is poorly understood. Optical and infrared measurements probe at most the top few cm of the surface layer and indicate the presence of layered volcanics and sediments, but it is likely that permafrost, hydrothermal deposits, and transient liquid water pockets occur at depths of meters to kilometers within the crust. An orbital synthetic aperture radar (SAR) can provide constraints on surface roughness, the depth of fine-grained aeolian or volcanic deposits, and the presence of strongly absorbing near-surface deposits such as carbonates. This information is crucial to the successful landing and operation of any rover designed to search for subsurface water. A rover-based ground-penetrating radar (GPR) can reveal layering in the upper crust, the presence of erosional or other subsurface horizons, depth to a permafrost layer, and direct detection of near-surface transient liquid water. We detail here the radar design parameters likely to provide the best information for Mars, based on experience with SAR and GPR in analogous terrestrial or planetary environments.

  13. The Hengill geothermal area, Iceland: variation of temperature gradients deduced from the maximum depth of seismogenesis

    USGS Publications Warehouse

    Foulger, G.R.

    1995-01-01

    Given a uniform lithology and strain rate and a full seismic data set, the maximum depth of earthquakes may be viewed to a first order as an isotherm. These conditions are approached at the Hengill geothermal area, S. Iceland, a dominantly basaltic area. The temperature at which seismic failure ceases for the strain rates likely at the Hengill geothermal area is determined by analogy with oceanic crust, and is about 650 ?? 50??C. The topographies of the top and bottom of the seismogenic layer were mapped using 617 earthquakes. The thickness of the seismogenic layer is roughly constant and about 3 km. A shallow, aseismic, low-velocity volume within the spreading plate boundary that crosses the area occurs above the top of the seismogenic layer and is interpreted as an isolated body of partial melt. The base of the seismogenic layer has a maximum depth of about 6.5 km beneath the spreading axis and deepens to about 7 km beneath a transform zone in the south of the area. -from Author

  14. Biogeochemistry of Stinking Springs, Utah. Part II: Microbial Diversity and Photo- and Chemo-Autotrophic Growth Rates in a Layered Microbial Mat

    NASA Astrophysics Data System (ADS)

    Monteverde, D.; Metzger, J. G.; Bournod, C.; Kelly, H.; Johnson, H.; Sessions, A. L.; Osburn, M.; Shapiro, R. S.; Rideout, J.; Johnston, D. T.; Stevenson, B.; Stamps, B. W.; Vuono, D.; Hanselmann, K.; Spear, J. R.

    2013-12-01

    Layered microbial mats have garnered attention for their high phylogenetic diversity and exploitation of geochemical gradients often on the mm scale. However, despite their novelty and implications for early life diversification, little is known about layered microbial mat growth rates or the interdependence of the microbial communities within the system. Stinking Springs, a warm, sulfidic, saline spring northeast of the Great Salt Lake, serves as our test-site to investigate some of these questions. Stinking Springs undergoes downstream changes in pH (6.59-8.14), sulfide (527μM - below detection), sulfate (13-600μM), TCO2 (7.77-3.71mM), and temperature (40-21°C) along its ~150m flow path. The first 10m of discharge is channelized, beyond that, the spring supports a 10 to 40mm-thick layered microbial mat covering ~40% of the total spring runoff area. The mat was divided into four texturally-distinct layers which were each analyzed for 16S rRNA, lipid abundance, and bicarbonate and acetate uptake rates in addition to standard microscopy analyses. 16S rRNA analyses confirmed high taxa diversity within each layer, which varied significantly in taxa makeup such that no single phylum dominated the abundance (>33%) in more than one mat layer. The taxonomic diversity tended to increase with mat depth, a similar finding to other studies on layered microbial mats. A mat sampling transect across 16 meters showed that layer taxonomic diversity was conserved horizontally for all four mat layers, which implies mat depth has a larger control on diversity than physical or chemical parameters. Microscopy indicated the presence of diatoms in all layers which was confirmed by lipid abundance of sterols and long-branch fatty acid methyl esters. Incubation experiments were conducted in light and dark conditions over 24 hours with separate 13C-tagged bicarbonate and acetate additions. Heterotrophic growth rates (acetate uptake; 0.03-0.65%/day) were higher than autotrophic growth rates (bicarbonate uptake; 0-0.16%/day) under both dark and light conditions. Light conditions yielded higher growth rates for both heterotrophs and autotrophs and the highest rates were consistently found in the top mat layer and decreased with depth. The addition of 13C-acetate and concomitant high uptake is a measure of potential heterotrophy since in situ acetate concentrations are unlikely to be as high. 13C-bicarbonate uptake, on the other hand, should quantitatively represent the autotrophic growth rate. The Stinking Spring layered microbial mats display high taxonomic diversity, which is conserved horizontally across distances of meters and varies significantly with depth. Mats experience highest growth in the surface layer likely driven by phototrophs; high rates of bicarbonate uptake in the dark indicate considerable chemoautotrophy. Covariation in the heterotroph growth rates and 16S rRNA heterotroph abundance with mat depth indicates that heterotrophy may play an important role in the growth of these layered mats.

  15. Discontinuities in the shallow Martian crust at Lunae, Syria, and Sinai Plana

    USGS Publications Warehouse

    Davis, P.A.; Golombek, M.P.

    1990-01-01

    Detailed photoclinometric profiles across 125 erosional features and 141 grabens in the western equatorial region of Mars indicate the presence of three discontinuities within the shallow crust, at depths of 0.3, 0.6 km, 1 km, and 2-3 km. The shallowest discontinuity corresponds to thickness estimates for the ridged plains unit in this region, and thus the discontinuity probably is the contact between a sequence of layered rock making up this unit and the underlying megaregolith. The 1-km discontinuity is reflected in the base levels of erosion of all the features studied, and it may correspond to the base of the proposed layer of ground ice. Model calculations show that graben-bounding faults consistently intersect at the mechanical discontinuity at about 1 km depth. This discontinuity may represent an interface between ice-laden and dry regolith, ice-laden and water-laden regolith, or pristine and cemented regolith. A correlation between wall valley head depth and local thickness of the faulted layer suggests that the 1-km discontinuity also controlled the depth of the heads of sapping canyons. The third discontinuity, at a depth of 2-3 km, corresponds to the proposed base of the Martian megaregolith and is probably the interface between overlying, ejected breccia and in situ, fractured basement rocks. -from Authors

  16. Resolution of anisotropic and shielded highly conductive layers using 2-D electromagnetic modelling in the Rhine Graben and Black Forest

    NASA Astrophysics Data System (ADS)

    Tezkan, Bülent; Červ, Václav; Pek, Josef

    1992-12-01

    Anisotropy in magnetotelluric (MT) data has been found very often and has been explained as the result of local structures of different conductivities. In this paper, an observed anisotropy in MT data is not interpreted qualitatively in terms of local structures but is modelled quantitatively by a quasi-anisotropic layer. Besides the MT transfer functions, measurements of the vertical magnetic component are required. The second goal of this paper is to describe a method which permits the resolution of mid-crustal conductive layers in the presence of an additional high-conductivity layer at the surface. This method is possible in a two-dimensional (2-D) situation that limits the spatial extension of the surface structure. Again, vertical magnetic field recordings are necessary, but the phase of the E-polarization with respect to the 2-D structure is the most sensitive parameter. Using two field sites in Southern Germany, it has been possible to give a quantitative explanation of anisotropy and an improved depth resolution, and to derive an integrated conductivity of the highly conductive mid-crustal layers using MT and geomagnetic depth sounding data. The anisotropic highly conductive layer is located 12 km beneath the poorly conductive Black Forest crystalline rocks, whereas it is at a depth of 6 km beneath the highly conductive Rhine Graben sediments.

  17. A new approach to assess the skier additional stress within a multi-layered snowpack

    NASA Astrophysics Data System (ADS)

    Monti, Fabiano; Gaume, Johan; van Herwijnen, Alec; Schweizer, Jürg

    2014-05-01

    The physical and mechanical processes of dry-snow slab avalanche formation can be distinguished into two subsequent phases: failure initiation and crack propagation. Several approaches tried to quantify slab avalanche release probability in terms of failure initiation, based on a simple strength-of-material approach (strength vs. stress). Even if it is known that both weak layer and slab properties play a major role in avalanche release, apart from weak layer characteristics, often only the slab thickness and its average density were considered. For calculating the amount of additional stress (e.g. due to a skier) at the depth of the weak layer, the snow cover was often assumed to be a semi-infinite elastic half space in order to apply Boussinesq's theory. However, finite element (FE) calculations have shown that slab layering strongly influences the stress at depth. To avoid FE calculations, we suggest a new approach based on a simplification of multi-layered elasticity theory. It allows computing the additional stress due to a skier at the depth of the weak layer, taking into account the layering of the snow slab and the substratum. The proposed approach was first tested on simplified snow profiles and compared reasonably well with FE calculations. We then implemented the method to refine the classical skier stability index. Using manually observed snow profiles, classified in different stability classes using stability tests, we obtained a satisfactory discrimination power. Lastly, the refined skier stability index was implemented into the 1-D snow cover model SNOWPACK and presented on two case studies. In the future, it will be interesting to implement the proposed method for describing skier-induced stress within a multi-layered snowpack into more complex models which take into account not only failure initiation but also crack propagation.

  18. Entrainment of bed material by Earth-surface mass flows: review and reformulation of depth-integrated theory

    USGS Publications Warehouse

    Iverson, Richard M.; Chaojun Ouyang,

    2015-01-01

    Earth-surface mass flows such as debris flows, rock avalanches, and dam-break floods can grow greatly in size and destructive potential by entraining bed material they encounter. Increasing use of depth-integrated mass- and momentum-conservation equations to model these erosive flows motivates a review of the underlying theory. Our review indicates that many existing models apply depth-integrated conservation principles incorrectly, leading to spurious inferences about the role of mass and momentum exchanges at flow-bed boundaries. Model discrepancies can be rectified by analyzing conservation of mass and momentum in a two-layer system consisting of a moving upper layer and static lower layer. Our analysis shows that erosion or deposition rates at the interface between layers must in general satisfy three jump conditions. These conditions impose constraints on valid erosion formulas, and they help determine the correct forms of depth-integrated conservation equations. Two of the three jump conditions are closely analogous to Rankine-Hugoniot conditions that describe the behavior of shocks in compressible gasses, and the third jump condition describes shear traction discontinuities that necessarily exist across eroding boundaries. Grain-fluid mixtures commonly behave as compressible materials as they undergo entrainment, because changes in bulk density occur as the mixtures mobilize and merge with an overriding flow. If no bulk density change occurs, then only the shear-traction jump condition applies. Even for this special case, however, accurate formulation of depth-integrated momentum equations requires a clear distinction between boundary shear tractions that exist in the presence or absence of bed erosion.

  19. Secondary ion emission from phosphatidic acid sandwich films under atomic and molecular primary ion bombardment

    NASA Astrophysics Data System (ADS)

    Stapel, D.; Benninghoven, A.

    2001-11-01

    Secondary ion yields increase considerably when changing from atomic to molecular primary ions. Since secondary ion emission from deeper layers could result in a pronounced yield increase, the secondary ion emission depth of molecular fragments was investigated. A phosphatidic acid Langmuir-Blodgett (LB) sandwich system was applied. The well-defined layer structure of the applied sample allows the assignment of different depths of origin to the selected fragment ions. At least 93% of the detected characteristic molecular fragment ions originate from the first and second layers. This holds true for all applied atomic and molecular primary ions.

  20. The Gross Motor Skills of Children with Mild Learning Disabilities

    ERIC Educational Resources Information Center

    Nonis, Karen P.; Jernice, Tan Sing Yee

    2014-01-01

    Many international studies have examined the gross motor skills of children studying in special schools while local studies of such nature are limited. This study investigated the gross motor skills of children with Mild Learning Disabilities (MLD; n = 14, M age = 8.93 years, SD = 0.33) with the Test of Gross Motor Development-2 (TGMD-2, Ulrich,…

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